Your job contains 1 sequence.
>000916
MGKKKQKKAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAV
VHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTH
YPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ
IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC
TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV
SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD
ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE
NKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCM
LLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNP
ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS
MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL
QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL
DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM
LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA
AFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNAR
VPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL
MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENES
DEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILF
KVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNR
GTGQNPSNFLMSLMSPNTRQYFPLRDHKSRIPAHKGSTKGNQLSTQVAQPPLFHGSPVVG
SGSGTHIPPGPRGDSFKRPRGNWSK
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000916
(1225 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 3632 0. 1
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 3086 0. 2
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 932 9.8e-173 3
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 930 1.3e-172 3
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 929 5.8e-172 3
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 931 1.0e-171 4
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 948 3.3e-153 3
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 936 1.1e-151 4
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 930 1.3e-151 3
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 932 2.9e-151 4
UNIPROTKB|Q9H2U1 - symbol:DHX36 "Probable ATP-dependent R... 934 7.9e-150 3
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 931 2.1e-149 3
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 874 1.4e-148 2
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 857 3.3e-147 2
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 905 1.9e-146 3
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 864 2.0e-145 3
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 915 1.3e-143 2
UNIPROTKB|E2QTL7 - symbol:DHX36 "Uncharacterized protein"... 840 8.9e-142 3
UNIPROTKB|F5GZS0 - symbol:DHX36 "Probable ATP-dependent R... 843 5.3e-140 3
UNIPROTKB|F1RLG0 - symbol:YTHDC2 "Uncharacterized protein... 922 1.2e-138 3
TAIR|locus:504954904 - symbol:ABO6 "ABA overly sensitive ... 774 1.0e-131 3
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 762 1.3e-127 2
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 716 2.7e-120 2
UNIPROTKB|Q5ZI74 - symbol:DHX30 "Putative ATP-dependent R... 701 8.7e-119 2
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 701 4.8e-118 2
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 684 2.9e-117 3
RGD|1308888 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box po... 664 1.4e-114 2
UNIPROTKB|Q5BJS0 - symbol:Dhx30 "Putative ATP-dependent R... 664 1.4e-114 2
MGI|MGI:1920081 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) bo... 664 1.7e-114 2
UNIPROTKB|D4A1V3 - symbol:Dhx30 "Putative ATP-dependent R... 664 1.7e-114 2
UNIPROTKB|J9P3P6 - symbol:DHX30 "Uncharacterized protein"... 667 2.9e-114 2
UNIPROTKB|H7BXY3 - symbol:DHX30 "Putative ATP-dependent R... 675 3.2e-114 2
UNIPROTKB|Q7L2E3 - symbol:DHX30 "Putative ATP-dependent R... 675 4.0e-114 2
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 668 5.2e-114 4
UNIPROTKB|E2RL62 - symbol:DHX30 "Uncharacterized protein"... 667 5.5e-114 2
UNIPROTKB|Q5R607 - symbol:DHX30 "Putative ATP-dependent R... 671 1.1e-113 2
UNIPROTKB|J9P264 - symbol:DHX30 "Uncharacterized protein"... 662 2.0e-113 2
UNIPROTKB|F1SLI4 - symbol:DHX30 "Uncharacterized protein"... 669 3.0e-113 2
UNIPROTKB|F1N0J0 - symbol:DHX30 "Putative ATP-dependent R... 669 5.4e-112 2
UNIPROTKB|Q2NKY8 - symbol:DHX30 "Putative ATP-dependent R... 669 3.8e-111 2
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 670 1.4e-110 2
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 665 2.2e-109 2
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 697 6.7e-109 4
MGI|MGI:2147067 - symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His... 655 1.1e-108 2
UNIPROTKB|F1M8G5 - symbol:Dhx57 "Protein Dhx57" species:1... 655 2.4e-108 2
UNIPROTKB|F1LSC4 - symbol:Dhx57 "Protein Dhx57" species:1... 655 3.0e-108 2
UNIPROTKB|Q7Z478 - symbol:DHX29 "ATP-dependent RNA helica... 690 1.2e-107 4
UNIPROTKB|Q5R874 - symbol:DHX9 "ATP-dependent RNA helicas... 617 4.4e-107 2
UNIPROTKB|Q08211 - symbol:DHX9 "ATP-dependent RNA helicas... 617 4.4e-107 2
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 640 5.3e-107 2
UNIPROTKB|E2RID8 - symbol:DHX29 "Uncharacterized protein"... 679 7.9e-107 3
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 613 3.0e-106 3
FB|FBgn0002774 - symbol:mle "maleless" species:7227 "Dros... 615 3.3e-106 3
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 609 4.2e-106 2
UNIPROTKB|J9P6V4 - symbol:DHX29 "Uncharacterized protein"... 671 6.7e-106 3
UNIPROTKB|E1B9N7 - symbol:DHX29 "Uncharacterized protein"... 675 7.7e-106 3
MGI|MGI:2145374 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) bo... 659 8.6e-106 3
UNIPROTKB|E2RNT3 - symbol:DHX9 "Uncharacterized protein" ... 613 8.9e-106 2
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 665 1.6e-105 4
RGD|1308548 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box pol... 608 1.9e-105 2
UNIPROTKB|G5E5N3 - symbol:DHX9 "ATP-dependent RNA helicas... 607 2.7e-105 2
UNIPROTKB|Q28141 - symbol:DHX9 "ATP-dependent RNA helicas... 607 2.7e-105 2
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 642 4.7e-105 2
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 649 6.3e-105 2
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 586 9.8e-105 4
UNIPROTKB|F1SLN0 - symbol:DHX29 "Uncharacterized protein"... 658 1.3e-104 3
UNIPROTKB|I3LQ47 - symbol:DHX29 "Uncharacterized protein"... 657 1.7e-104 3
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 668 1.6e-103 4
RGD|2318361 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box po... 655 2.0e-103 3
UNIPROTKB|Q68FK8 - symbol:dhx9 "ATP-dependent RNA helicas... 603 3.8e-103 3
UNIPROTKB|I3LG95 - symbol:DHX29 "Uncharacterized protein"... 642 8.8e-103 3
WB|WBGene00004355 - symbol:rha-1 species:6239 "Caenorhabd... 615 2.6e-101 2
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 648 7.5e-100 2
DICTYBASE|DDB_G0267516 - symbol:dhx57 "RWD domain-contain... 556 4.9e-98 5
UNIPROTKB|G4MR96 - symbol:MGG_04709 "Uncharacterized prot... 547 7.6e-97 3
WB|WBGene00009922 - symbol:F52B5.3 species:6239 "Caenorha... 432 3.5e-93 4
UNIPROTKB|D6RA70 - symbol:YTHDC2 "Probable ATP-dependent ... 598 5.9e-93 2
CGD|CAL0005664 - symbol:orf19.6818 species:5476 "Candida ... 550 3.5e-90 3
UNIPROTKB|Q5ADM3 - symbol:CaO19.14110 "Putative uncharact... 550 3.5e-90 3
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 531 7.3e-88 2
FB|FBgn0030833 - symbol:CG8915 species:7227 "Drosophila m... 554 7.8e-88 3
UNIPROTKB|H7C109 - symbol:DHX57 "Putative ATP-dependent R... 668 3.4e-81 2
UNIPROTKB|I3LCY3 - symbol:DHX36 "Uncharacterized protein"... 740 1.2e-78 3
SGD|S000004411 - symbol:YLR419W "Putative helicase with l... 489 5.0e-78 3
POMBASE|SPCC895.09c - symbol:ucp12 "ATP-dependent RNA hel... 436 3.1e-75 4
UNIPROTKB|G4NI12 - symbol:MGG_17793 "Uncharacterized prot... 520 5.7e-73 3
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 465 1.2e-72 3
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 421 3.7e-71 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 436 5.4e-71 2
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 431 1.5e-70 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 408 3.0e-70 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 408 3.0e-70 2
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 429 3.1e-70 2
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 430 3.4e-70 2
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 430 3.4e-70 2
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 430 3.4e-70 2
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 430 3.4e-70 2
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 430 3.4e-70 2
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 430 3.4e-70 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 404 4.5e-70 2
WARNING: Descriptions of 212 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 3632 (1283.6 bits), Expect = 0., P = 0.
Identities = 721/1115 (64%), Positives = 868/1115 (77%)
Query: 22 PTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQR 81
PT EATRI +++++ F AS +EVYTF+ NLSN ER V+H++C+KMG+ SKSSGRG+QR
Sbjct: 15 PTSVEATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQR 74
Query: 82 RVSVCKSK-----KRVETDKG-KEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDAN 135
R+S+ KS+ K +K KE L ++F G+ ++LQ+LFTHYPP DG+
Sbjct: 75 RLSIFKSRHKNGNKNEANEKSNKEKLKCVSFPPGADVILQELFTHYPPCDGDTAATSFTK 134
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKD 195
S K + D F KP++S EI KV SL+SR++KD L++I + RSKLPI+SFKD
Sbjct: 135 YSGNKGKQGQWKDDFFRKPQISSEEILEKVASLSSRLKKDKALKEITKLRSKLPITSFKD 194
Query: 196 VITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIVCTQPRRISATSVAER 254
ITS V+SNQV+LISGETGCGKTTQVPQ+LL+H+WS K ETCKIVCTQPRRISA SV+ER
Sbjct: 195 AITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSVSER 254
Query: 255 ISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
IS ERGE+IG+NIGYK+RL+SKGG+HSS+VFCTNG+LLR+LV +G +
Sbjct: 255 ISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG-----------SVSS 303
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
VS +THIIVDEIHERD YSDFMLAIIRD+LPS PHLRLILMSATLDA+RFS YFGGCPV+
Sbjct: 304 VSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVV 363
Query: 375 QVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWS 434
+VPGFTYPV++ YLEDVLSILKS NHL S +L + + +LT+E+K LDEAI LAW+
Sbjct: 364 RVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSISDHKLDLTDEDKLALDEAIILAWT 423
Query: 435 NDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD 494
NDEFD LL+LVS GS +YNYQH T LTPLMV AGKGR+ DVCMLLS GAD LK+KD
Sbjct: 424 NDEFDALLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGRISDVCMLLSFGADWSLKSKD 483
Query: 495 GRTALQLGEQENQPEVAQIIKKHMENALSDSMK-QQLLDKYLATVNPELIDLVLIEQLLR 553
G TAL+L E ENQ E AQII++H +N+ S+S + QQLLDKY+AT+NPE +D+ LI+QL+R
Sbjct: 484 GMTALELAEAENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATINPEQVDVSLIQQLMR 543
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
KIC DSEDGAILVFLPGW+DINKTR RLL NPFF D++KF II LHSMVP+ +QKKVF R
Sbjct: 544 KICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNR 603
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PPPGCRKI+L+TNIAE+A+TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA+AKQR
Sbjct: 604 PPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQR 663
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGRCQ GICYHLYS+LRAAS+PDF+VPEIKR+P+EELCLQVK+LDPNC DFLQK
Sbjct: 664 QGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKL 723
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
LDPPV +I NA+ +LQDIGAL+ E++TELGEK G L VHPL+SKMLFFA+L++CLDPA
Sbjct: 724 LDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPA 783
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LTLACA+DY++PFT+P+SP E+++A AAK ELASL GG SD LAV+AAFECWKNAK RG
Sbjct: 784 LTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRGL 843
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGL 913
A FCSQYFVS M ML MR QL++EL ++G IP D+SSCS N+R PGI+ AVL GL
Sbjct: 844 SAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNSRDPGILRAVLAVGL 903
Query: 914 YPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
YPMV RL P N RR VETA GAKVR+H S NF LS KK D+ L+V+DEITRGDGG
Sbjct: 904 YPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDES-LLVFDEITRGDGG 962
Query: 973 MHVRNCTVVGPLPLLLLATEIAVAPAPXXXXXXXXX--------XXXXXXXXXXXXXXXC 1024
MH+RNCTV LPLLL++TEIAVAP
Sbjct: 963 MHIRNCTVARDLPLLLISTEIAVAPTGSSDSDDSNEEEEDDEEVAANTNEEVAANTNEEG 1022
Query: 1025 MEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTH 1084
M+I K + G +MSSP+ SV +VVDRWL F +TAL++AQ+Y LRERL +ILFKVTH
Sbjct: 1023 MDIH-KEESRRGAKMMSSPENSVKLVVDRWLPFRTTALEVAQMYILRERLMASILFKVTH 1081
Query: 1085 PQKALPPVLEASMYAMASILSYDGFSGISLPAESV 1119
P++ LPP L ASM+A+A ILSYDG +G+S P ES+
Sbjct: 1082 PREHLPPHLGASMHAIAGILSYDGHAGLSCPPESM 1116
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 3086 (1091.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 614/1032 (59%), Positives = 788/1032 (76%)
Query: 101 LPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE 160
L ++F +K VL DLFT YPP DG+ + + + K D F KP M+K +
Sbjct: 131 LKCVSFPPEAKAVLHDLFTRYPPCDGDTTGTSLGIYTTGNVNSNWKD-DFFKKPHMTKHD 189
Query: 161 IAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQ 220
I V SL+SR++K+ + R+I E RSKLPI+SF+D I S V+SNQVVLI+GETGCGKTTQ
Sbjct: 190 IENNVVSLSSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQ 249
Query: 221 VPQFLLEHIW-SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK 279
VPQ+LL+H+W SK E CKI+CTQPRRISA SV++RIS ERGE IG +GYK+RL+S+GG+
Sbjct: 250 VPQYLLDHMWHSKKEACKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGR 309
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
SS+VFCTNG+LLR+L+ +GV+ S+ P D+ THIIVDEIHERD YSDFML I
Sbjct: 310 ESSVVFCTNGILLRVLIGKGVN-----SSVP---DI---THIIVDEIHERDSYSDFMLMI 358
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAE 399
+RD+LPS PHLRLILMSATLDA+RFS+YFGGCPV++VPGFTYPV++F+L+D LS+L S +
Sbjct: 359 LRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNSDK 418
Query: 400 SNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHT 459
++HL SA V + +E+K +LDEAI LAW+NDEFD L++LVS EGS YNYQ++
Sbjct: 419 NSHLLSA---VKRD---FKDEDKVSLDEAIDLAWTNDEFDCLVDLVSSEGSHEAYNYQNS 472
Query: 460 LTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHME 519
TGLTPLMV AGKGRV DVC LLS+GADC LK+K+G TAL+L E+ENQ E AQII++H
Sbjct: 473 TTGLTPLMVFAGKGRVSDVCKLLSVGADCTLKSKEGITALELAEKENQFETAQIIREHAG 532
Query: 520 NALSDSMK-QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTR 578
N S+S + Q LLDKY+AT+ PE +D+ LI +L++KIC DS+DGAILVFLPGWE+I+KT+
Sbjct: 533 NIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTK 592
Query: 579 DRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
++LL + FF ++KF+I+ LHS VP+ +QKKVF RPP GCRKI+L+TNIAE+A+TIDDVV
Sbjct: 593 EKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVV 652
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLP 698
YVIDSGRMKEKSYDPYN+VSTLQSSWVSKA+AKQRAGRAGRCQAGICYHLYS+LRAASLP
Sbjct: 653 YVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLP 712
Query: 699 DFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
+++VPE+ R+P++ELCLQVK+LDPNCN+ DFLQK +DPPV+ +I NA+I+L+DIGAL+ +
Sbjct: 713 EYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPE 772
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
E++TELG+K G L VHP +SKM++FAIL++CLDPAL LACA+D +DPFT+P+SP ++K+A
Sbjct: 773 EELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKA 832
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
AAK ELASLYG SD LA +AAF+CWKNAK GQ FCS+YF+S VM L + ++L
Sbjct: 833 AAAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKL 892
Query: 879 QTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV-ETAGGA 937
Q EL ++G IP S+CS NA PGI+ AV+ GLYPM+ R+ P KN R V ET GA
Sbjct: 893 QGELNRHGVIPSSSSNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGA 952
Query: 938 KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAP 997
KVR+ S N +S K D+ L+V+DEITRGD G+ +R+CTV+ +P+LL + EIAV+
Sbjct: 953 KVRVPSLSNNVDMSSTKFDEA-LIVFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAVS- 1010
Query: 998 APXXXXXXXXXXXXXXXXXXXXXXXXCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYF 1057
M+ID K G+ GE +M P+ SV VVVDRWL F
Sbjct: 1011 ---TTESYDAVKSDDEEDHKVGNVGDAMDID-KEVGRPGEKIMLGPENSVKVVVDRWLPF 1066
Query: 1058 GSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAE 1117
TA +IAQ+Y LRERL +ILFKV HP++ LPP L ASMYA+AS+LSYD + S+
Sbjct: 1067 KVTAFEIAQMYILRERLMASILFKVKHPKENLPPHLGASMYAIASVLSYDSLAQSSVQTV 1126
Query: 1118 SVESLTSMIQAT 1129
+V+ +TS++ AT
Sbjct: 1127 AVQPITSVVDAT 1138
Score = 154 (59.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 28/73 (38%), Positives = 50/73 (68%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ EAT +++L+ F AS ++ Y F+ L+N ER ++H++C+ MG+ SKS+G G++RR+
Sbjct: 13 LCEATGAWATKVLEDFRASGNDSYVFEQQLTNSERGIIHQMCRTMGLRSKSNGSGEERRL 72
Query: 84 SVCKSKKRVETDK 96
S+ K ++DK
Sbjct: 73 SLFKGDGISKSDK 85
Score = 38 (18.4 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 15/56 (26%), Positives = 21/56 (37%)
Query: 1106 YDGFSGISLPAESVESLTSMIQATEIDK-CPAARNRGTGQNPSNFLMSLMSPNTRQ 1160
Y SLP V + M +D+ C + N ++FL LM P Q
Sbjct: 703 YSKLRAASLPEYRVPEVMRM----PVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQ 754
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 932 (333.1 bits), Expect = 9.8e-173, Sum P(3) = 9.8e-173
Identities = 223/610 (36%), Positives = 339/610 (55%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP-- 585
++LL Y + + E +DL LI LL IC + GA+L+FLPG+++I RDR+L +
Sbjct: 589 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKR 648
Query: 586 FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
F T ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG+
Sbjct: 649 FADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGK 708
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEI 705
+KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+
Sbjct: 709 VKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPEL 768
Query: 706 KRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TEL
Sbjct: 769 LRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTEL 828
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A +
Sbjct: 829 GYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKR 888
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
+ G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR QL +L
Sbjct: 889 FTA--GAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRA 946
Query: 885 NGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAK-V 939
+GF+ D+ + N+ ++ A L+AG+YP + H + V T K V
Sbjct: 947 SGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENLVLTGPKEKKV 1001
Query: 940 RLHPHSLNFKLSFKKTDDC----------PL--MVYDEITRGDGGMHVRNCTVVGPLPLL 987
R HP S+ + +KK P ++YDE+TR ++R C+ V P+ +L
Sbjct: 1002 RFHPASVLSQPQYKKIPPANGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSAVTPVTIL 1061
Query: 988 LLATEIAVAPAPXXXXXXXXXXXXXXXXXXXXXXXXCMEIDDKTSGQHGENVMSSPDKSV 1047
+ P E++DKT+ N+ +
Sbjct: 1062 VFC-------GPARLASNALQEPSSFRVDGIPNDSSDSEMEDKTTA----NLAA------ 1104
Query: 1048 TVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
+ +D WL+F + + LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1105 -LKLDEWLHFTLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1163
Query: 1108 GFS-GISLPA 1116
S G+ P+
Sbjct: 1164 EQSAGLQQPS 1173
Score = 598 (215.6 bits), Expect = 9.8e-173, Sum P(3) = 9.8e-173
Identities = 140/370 (37%), Positives = 210/370 (56%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K K ET + + + +K ++ L +P + E E L +
Sbjct: 101 TV-KKKDGSET---AHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ G S L S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-GDSTL------------STVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL 392
VK +LED+L
Sbjct: 375 VKEMFLEDIL 384
Score = 206 (77.6 bits), Expect = 9.8e-173, Sum P(3) = 9.8e-173
Identities = 57/175 (32%), Positives = 93/175 (53%)
Query: 425 LDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLS 483
+D +S W + + D ++ L + NV +Y+H+ T T LMV AG+G V L+S
Sbjct: 469 MDACLSDIWLHKDIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQVEQLIS 528
Query: 484 LGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHM---------ENAL-----SD--SMK 527
+GA+ KA +G AL + Q E+ +++ + E++L SD +
Sbjct: 529 MGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSATLEFGNLDESSLVQTNGSDLSAED 588
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
++LL Y + + E +DL LI LL IC + GA+L+FLPG+++I RDR+L
Sbjct: 589 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRIL 643
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 930 (332.4 bits), Expect = 1.3e-172, Sum P(3) = 1.3e-172
Identities = 225/611 (36%), Positives = 339/611 (55%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP-- 585
++LL Y + + E +DL LI LL IC E GAIL+FLPG+++I RDR+L +
Sbjct: 588 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCEAGAILIFLPGYDEIVGLRDRILFDDKR 647
Query: 586 FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
F + ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG+
Sbjct: 648 FAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGK 707
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEI 705
+KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+
Sbjct: 708 VKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPEL 767
Query: 706 KRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TEL
Sbjct: 768 LRMPLQELCLHTKLLAPVNCAIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTEL 827
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A +
Sbjct: 828 GYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKR 887
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
+ G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR QL +L
Sbjct: 888 FTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRA 945
Query: 885 NGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA--K 938
+GF+ D+ + N+ ++ A L+AG+YP + + R V AG K
Sbjct: 946 SGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPHLVHV------DRENVVLAGPKEKK 999
Query: 939 VRLHPHSLNFKLSFKKTDDC----------PL--MVYDEITRGDGGMHVRNCTVVGPLPL 986
VR HP S+ + +KK P ++YDE+TR ++R C+ V P+ +
Sbjct: 1000 VRFHPTSVLSQPQYKKIPPANGQTAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTV 1059
Query: 987 LLLATEIAVAPAPXXXXXXXXXXXXXXXXXXXXXXXXCMEIDDKTSGQHGENVMSSPDKS 1046
L+ P E++D+T+ N+
Sbjct: 1060 LVFC-------GPARLASNALQEPSSFRADGIPNDSSDSEMEDRTTA----NL------- 1101
Query: 1047 VTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSY 1106
T+ +D WL F + + LR++ L ++ P K V EA++ A+ ++LS
Sbjct: 1102 ATLKLDEWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLST 1161
Query: 1107 DGFS-GISLPA 1116
+ S G+ P+
Sbjct: 1162 EEQSAGLQQPS 1172
Score = 598 (215.6 bits), Expect = 1.3e-172, Sum P(3) = 1.3e-172
Identities = 140/370 (37%), Positives = 210/370 (56%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 40 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 99
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K K ET + + + +K ++ L +P + E E L +
Sbjct: 100 TV-KKKDGSET---AHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 148
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 149 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 206
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 207 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 266
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ G S L S +TH+I
Sbjct: 267 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-GDSTL------------STVTHVI 313
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 314 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 373
Query: 383 VKSFYLEDVL 392
VK +LED+L
Sbjct: 374 VKEMFLEDIL 383
Score = 207 (77.9 bits), Expect = 1.3e-172, Sum P(3) = 1.3e-172
Identities = 59/175 (33%), Positives = 93/175 (53%)
Query: 425 LDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLS 483
+D +S W + + D ++ L + NV +Y+H+ T T LMV AG+G V L+S
Sbjct: 468 MDACLSDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLIS 527
Query: 484 LGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHM---------ENAL-----SD--SMK 527
+GA+ KA +G AL + Q E+ +++ + E++L SD +
Sbjct: 528 MGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTSGSDLSAED 587
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
++LL Y + + E +DL LI LL IC E GAIL+FLPG+++I RDR+L
Sbjct: 588 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCEAGAILIFLPGYDEIVGLRDRIL 642
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 929 (332.1 bits), Expect = 5.8e-172, Sum P(3) = 5.8e-172
Identities = 255/731 (34%), Positives = 384/731 (52%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N LS + ++LL Y + + E +DL LI LL IC + GAIL+FLPG+++I RD
Sbjct: 597 NDLS-AEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRD 655
Query: 580 RLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDV 637
R+L + F +T ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++DV
Sbjct: 656 RILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDV 715
Query: 638 VYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL 697
V+VIDSG++KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++
Sbjct: 716 VFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNM 775
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS 756
+FQ PE+ R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+
Sbjct: 776 LEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKTIDAMD 835
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
E +TELG L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+
Sbjct: 836 AWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKR 895
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
A + + G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR
Sbjct: 896 AAMLCRKRFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRT 953
Query: 877 QLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE 932
QL +L +GF+ D+ + N+ ++ A L+AG+YP + H + +
Sbjct: 954 QLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENVIL 1008
Query: 933 TAGGAK-VRLHPHSLNFKLSFKKTDDC----------PL--MVYDEITRGDGGMHVRNCT 979
T K VR HP S+ + +KK P ++YDE+TR ++R C+
Sbjct: 1009 TGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCS 1068
Query: 980 VVGPLPLLLLATEIAVAPAPXXXXXXXXXXXXXXXXXXXXXXXXCMEIDDKTSGQHGENV 1039
V P+ +L+ P E++D+T+ N+
Sbjct: 1069 AVTPVTVLVFC-------GPARLASNALQEPSSFRADGIPNDSSDSEMEDRTTA----NL 1117
Query: 1040 MSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYA 1099
+ + +D WL F + + LR++ L ++ P K V EA++ A
Sbjct: 1118 AA-------LKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRA 1170
Query: 1100 MASILSYD----GF---SGISL---PAESVE-SLTSMIQATEIDKCPAARNRGTGQNPSN 1148
+ ++LS + G SGI P S E L S ++ K A G
Sbjct: 1171 IIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRKSTADTEFADGSTTGE 1230
Query: 1149 FLMSLMSPNTRQYFPLRDHKSRIPAH-KGST--KGNQLS---TQVAQPPLFHGSPVV-GS 1201
++ + SP+ + P + +K R H K ST + +Q S T + P SP S
Sbjct: 1231 RVL-MKSPSPALH-PPQKYKDRGILHPKRSTDDRSDQSSVKSTDSSSYPSPCASPSPPSS 1288
Query: 1202 GSGTHIPPGPR 1212
G G+ P PR
Sbjct: 1289 GKGSK-SPSPR 1298
Score = 597 (215.2 bits), Expect = 5.8e-172, Sum P(3) = 5.8e-172
Identities = 139/370 (37%), Positives = 210/370 (56%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 56 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 115
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K K ET + + + +K ++ L +P + E E L +
Sbjct: 116 TV-KKKDGSET---AHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 164
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + ++ + R LP+ ++ I +
Sbjct: 165 RGNVFAVEAENREMSKT--SGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 222
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 223 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 282
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ G S L S +TH+I
Sbjct: 283 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-GDSTL------------STVTHVI 329
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 330 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 389
Query: 383 VKSFYLEDVL 392
VK +LED+L
Sbjct: 390 VKEMFLEDIL 399
Score = 204 (76.9 bits), Expect = 5.8e-172, Sum P(3) = 5.8e-172
Identities = 58/175 (33%), Positives = 91/175 (52%)
Query: 425 LDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLS 483
+D +S W + + D ++ L + NV +Y+H+ T T LMV AG+G V L+S
Sbjct: 484 MDACLSDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFTSQVEQLIS 543
Query: 484 LGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH---ME--NALSDSMKQ---------- 528
+GA+ KA +G AL + Q E+ +++ + +E N S+ Q
Sbjct: 544 MGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGNDLSAED 603
Query: 529 -QLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
+LL Y + + E +DL LI LL IC + GAIL+FLPG+++I RDR+L
Sbjct: 604 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRIL 658
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 931 (332.8 bits), Expect = 1.0e-171, Sum P(4) = 1.0e-171
Identities = 204/484 (42%), Positives = 300/484 (61%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF- 586
++LL Y + + E +DL LI LL IC S+ GAIL+FLPG+++I RDR++ +
Sbjct: 499 RELLKAYHHSFDDEKVDLDLIMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKR 558
Query: 587 FRDT--SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSG 644
F D SK+ + LHS + ++ QK V K PP G RKIILSTNIAET+IT++DVV+VIDSG
Sbjct: 559 FVDNAHSKYQVFMLHSNMQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSG 618
Query: 645 RMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPE 704
+MKEKS+D + V+ L++ W+SKASA QR GRAGRC+ G+C+HL+S+LR ++ +FQ PE
Sbjct: 619 KMKEKSFDALSCVTMLKTVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQTPE 678
Query: 705 IKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
++R+P++ELCL KLL P NC + DFL K DPP ++ +RNAI +L+ I A+ + E +TE
Sbjct: 679 LRRMPLQELCLHTKLLAPVNCPVVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTE 738
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A +
Sbjct: 739 LGYHLAELPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTVASQKRAAMLCRK 798
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
LA+ G SD + ++ AF+ W+ A+ G E FC + F+S M +++GMR QL +L
Sbjct: 799 RLAA--GTFSDHMVLLRAFQAWQKARSDGWERVFCEKNFLSQATMEIIIGMRTQLLGQLR 856
Query: 884 KNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAK- 938
GF+ D+ + N+ ++ A L+AG+YP + H + V T K
Sbjct: 857 ALGFVRARGGADIRDVNVNSENWAVVKAALVAGMYPNLV-----HVDRENLVLTGPKEKK 911
Query: 939 VRLHPHSLNFKLSFKK----------TDDCPL--MVYDEITRGDGGMHVRNCTVVGPLPL 986
VR HP S+ + +KK P ++YDE+TR ++R C+VV P+ +
Sbjct: 912 VRFHPTSVLSQAQYKKIPPSNGQAAAVQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTV 971
Query: 987 LLLA 990
L +
Sbjct: 972 ALFS 975
Score = 518 (187.4 bits), Expect = 1.0e-171, Sum P(4) = 1.0e-171
Identities = 102/208 (49%), Positives = 141/208 (67%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ K+ I + N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPR
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCRIFCTQPR 159
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++ +VAER++ ER E +G +GY+IRLES+ + + FCTNG+LLR L++ G S L
Sbjct: 160 RLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMA-GDSAL- 217
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
S +TH+IVDE+HERDR+SDF+L +RD+L + +L+LI+ SA LDA+ F
Sbjct: 218 -----------STVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLF 266
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+YFG CPVI + G + VK +LED+L
Sbjct: 267 IKYFGSCPVIHIQGRPFEVKEMFLEDIL 294
Score = 209 (78.6 bits), Expect = 1.0e-171, Sum P(4) = 1.0e-171
Identities = 68/211 (32%), Positives = 105/211 (49%)
Query: 397 SAESNHLDSASLIVPNEDPELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLE 448
S E N LDS+ V N L E + S L D +S W + + D ++
Sbjct: 346 SEEYNLLDSSGDTVFNH---LIERDTSCLEPWLIKEMDSCLSDIWLHKDIDSFAQVFHFI 402
Query: 449 GSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQ 507
+ NV +Y+H+ T T LM+ +G+G + V L+S+GA K+ +G AL + Q
Sbjct: 403 LTENVSVDYRHSETSATALMIASGRGFLSQVEQLISMGASVHCKSSNGWMALDWAKHFGQ 462
Query: 508 PEVAQIIKKH---MENALSD--SMKQ-----------QLLDKYLATVNPELIDLVLIEQL 551
EV +++ + ME+ D S+ Q +LL Y + + E +DL LI L
Sbjct: 463 TEVVDLLESYSASMESGNLDESSLVQASGNDLGAEDRELLKAYHHSFDDEKVDLDLIMHL 522
Query: 552 LRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
L IC S+ GAIL+FLPG+++I RDR++
Sbjct: 523 LYNICNSSDGGAILIFLPGYDEIISLRDRII 553
Score = 74 (31.1 bits), Expect = 1.0e-171, Sum P(4) = 1.0e-171
Identities = 43/177 (24%), Positives = 72/177 (40%)
Query: 1051 VDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDG-F 1109
+D WL+F + + L+ + +L ++ P K E ++ A+ S+LS + F
Sbjct: 1018 LDEWLHFKLDSEVAGLLMQLKLKWHSLLLRRMRAPSKPWSQADEITIRAIISVLSTEEQF 1077
Query: 1110 SGISLPAESVESLTSMIQATEIDKCPAARNRGTG------QNPSNFLMSLMSPNTRQYFP 1163
+G+ P+ V + E+ P R+ + + SN L +
Sbjct: 1078 AGLLQPS-GVGQRPRPVSYNELPSAPTWRSSSSSAETELSDDSSNAEKVLRKSAPPAFHQ 1136
Query: 1164 LRDHKSR-IPAHKGST--KGNQLSTQVAQ----P-PLFHGSPVVGSGSGTHIPPGPR 1212
R HK + + A K ++ K +Q S + P P SPV G GS T P PR
Sbjct: 1137 PRRHKEKNVVASKRTSDEKSDQSSVKSTDSSCYPSPCVSPSPVSGKGSKT---PSPR 1190
Score = 40 (19.1 bits), Expect = 5.6e-47, Sum P(3) = 5.6e-47
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
S T A+++ G LS E++ +G + C S + M+
Sbjct: 414 SETSATALMIASGRGFLSQVEQLISMGASVHCKSSNGWMA 453
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 948 (338.8 bits), Expect = 3.3e-153, Sum P(3) = 3.3e-153
Identities = 207/467 (44%), Positives = 298/467 (63%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
++ E +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIP
Sbjct: 467 MDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFIIIP 525
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+
Sbjct: 526 LHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNI 585
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+
Sbjct: 586 STMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQI 645
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+L I FL + +DPP + + +I L ++ AL E++T LG L L V P +
Sbjct: 646 KILRLG-GIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHI 704
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L
Sbjct: 705 GKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELAK--DTKSDHLT 760
Query: 838 VIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PED 891
V+ AF+ W+ AKQRG E +C +YF+SS + ML M+ Q L+ GF+ P+D
Sbjct: 761 VVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQD 820
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFK 949
S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N +
Sbjct: 821 PES-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVE 879
Query: 950 LSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+T+ + ++Y + +++ +CT V P LL +I++
Sbjct: 880 ----QTEFNYNWLIY-HLKMRTSSIYLYDCTEVSPYCLLFFGGDISI 921
Score = 528 (190.9 bits), Expect = 3.3e-153, Sum P(3) = 3.3e-153
Identities = 115/279 (41%), Positives = 179/279 (64%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ ++ + R K +D + + + E + + L +K +LR I +
Sbjct: 144 EHQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDATLDQQLLEDLQKKKTDLRYIEMQ 203
Query: 185 R--SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 204 RFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 263
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 323
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P +S+++HI++DEIHER+ SD ++ +++D+L P L+++LMSA
Sbjct: 324 D-----------P---HLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSA 369
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 370 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 408
Score = 55 (24.4 bits), Expect = 3.3e-153, Sum P(3) = 3.3e-153
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 1036 GENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHP 1085
G+ + + T+ VD W+ F S A + LR+ L + + K+ P
Sbjct: 917 GDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESP 966
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 936 (334.5 bits), Expect = 1.1e-151, Sum P(4) = 1.1e-151
Identities = 206/470 (43%), Positives = 298/470 (63%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 455 LQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFL 513
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 514 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 573
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 574 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 633
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 634 LQIKILRLG-GIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 692
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 693 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 748
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 749 HLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 808
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D + + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 809 PKDPKA-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSV 867
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
N + +TD ++Y + +++ +CT V P LL +I++
Sbjct: 868 NVE----QTDFHYNWLIY-HLKMRTSSIYLYDCTEVSPYCLLFFGGDISI 912
Score = 506 (183.2 bits), Expect = 1.1e-151, Sum P(4) = 1.1e-151
Identities = 107/237 (45%), Positives = 161/237 (67%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
+E L R + D ++ R KLP + + + ++++QV +ISGETGCGKTTQV QF
Sbjct: 178 LEDL-QRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQF 236
Query: 225 LLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGK 279
+L++ KG C+IVCTQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K
Sbjct: 237 ILDNYIERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRK 296
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
SI++CT G++L+ L S SRL S+++HI++DEIHER+ SD ++ +
Sbjct: 297 QGSILYCTTGIILQWLQSD--SRL------------SSVSHIVLDEIHERNLQSDVLMTV 342
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
I+D+L L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 343 IKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 399
Score = 48 (22.0 bits), Expect = 1.1e-151, Sum P(4) = 1.1e-151
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 1024 CMEIDDKTSGQHGENVMSSPDKSVTVV-VDRWLYFGSTALDIAQIYCLRERLSVAILFKV 1082
C E+ G ++ DK ++ VD W+ F S + LR+ L + K+
Sbjct: 895 CTEVSPYCLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKI 954
Query: 1083 THP 1085
P
Sbjct: 955 ESP 957
Score = 38 (18.4 bits), Expect = 1.1e-151, Sum P(4) = 1.1e-151
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 38 GFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKS 74
G S ++ + L N+E+ ++++ K +T KS
Sbjct: 118 GTEVSSEKKINSEKKLDNQEKKLLNQEKKTFRITDKS 154
Score = 38 (18.4 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 849 KQRGQEAWFCSQYFVSSG---VMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGII 905
K + QE ++ V + +++ G+RK+L + L + P V +R ++
Sbjct: 914 KDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIESPHPVDWDDTKSRDCAVL 973
Query: 906 HAVL 909
A+L
Sbjct: 974 SAIL 977
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 930 (332.4 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 203/467 (43%), Positives = 296/467 (63%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+IIP
Sbjct: 579 IDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFLIIP 637
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+
Sbjct: 638 LHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNI 697
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+
Sbjct: 698 STMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQI 757
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+L I FL + +DPP + +I L ++ AL E++T LG L L V P +
Sbjct: 758 KILRLG-GIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHI 816
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L
Sbjct: 817 GKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTKSDHLT 872
Query: 838 VIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PED 891
V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D
Sbjct: 873 VVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKD 932
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFK 949
S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N +
Sbjct: 933 PKS-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVE 991
Query: 950 LSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+T+ ++Y + +++ +CT V P LL +I++
Sbjct: 992 ----QTEFHYNWLIY-HLKMRTSSIYLYDCTEVSPYCLLFFGGDISI 1033
Score = 534 (193.0 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 119/279 (42%), Positives = 184/279 (65%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK +Q +++ + R K +D + + + E +A+ + L +K ++LR I +
Sbjct: 256 ENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVALDQQLLEDLRKKKSDLRYIEMQ 315
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIW-SKGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L+ +I KG C+IVC
Sbjct: 316 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVC 375
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 376 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 435
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
S L S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 436 D--SHL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSA 481
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 482 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 520
Score = 52 (23.4 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 1036 GENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHP 1085
G+ + + T+ VD W+ F S A + LR+ L + K+ P
Sbjct: 1029 GDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDTLLQEKIESP 1078
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 932 (333.1 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 205/470 (43%), Positives = 297/470 (63%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 454 LEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFL 512
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 513 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 572
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 573 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 632
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 633 LQIKILRLG-GIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 691
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 692 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 747
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 748 HLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 807
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D + + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 808 PKDPKA-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSV 866
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
N + +TD ++Y + +++ +CT V P LL +I++
Sbjct: 867 NVE----QTDFHYNWLIY-HLKMRTSSIYLYDCTEVSPYCLLFFGGDISI 911
Score = 504 (182.5 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 114/277 (41%), Positives = 178/277 (64%)
Query: 130 EKLDANQSRKSDKTRGKR-VDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEER- 185
EK NQ +K+ + K +D + + + E + + + L +K + R I +R
Sbjct: 136 EKKLLNQEKKTYRITDKSYIDRDSEYLLQQNEPNLGLDQQLLEDLQKKKTDPRYIEMQRF 195
Query: 186 -SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQ 242
KLP + + + ++++QV +ISGETGCGKTTQV QF+L++ +G C+IVCTQ
Sbjct: 196 RKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIGSACRIVCTQ 255
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 256 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD- 314
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
SRL S+++HI++DEIHER+ SD ++ +I+D+L L++ILMSATL
Sbjct: 315 -SRL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATL 361
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 362 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 398
Score = 51 (23.0 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 1024 CMEIDDKTSGQHGENVMSSPDKSVTVV-VDRWLYFGSTALDIAQIYCLRERLSVAILFKV 1082
C E+ G ++ DK ++ VD W+ F S + LR+ L + + K+
Sbjct: 894 CTEVSPYCLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKI 953
Query: 1083 THP 1085
P
Sbjct: 954 ECP 956
Score = 37 (18.1 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 38 GFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKS 74
G S ++ + L N+E+ ++++ K +T KS
Sbjct: 117 GTEVSSEKKINSEKKLDNQEKKLLNQEKKTYRITDKS 153
Score = 37 (18.1 bits), Expect = 3.4e-42, Sum P(3) = 3.4e-42
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 849 KQRGQEAWFCSQYFVSSG---VMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGII 905
K + QE ++ V + +++ G+RK+L L + P V +R ++
Sbjct: 913 KDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKIECPHPVDWNDTKSRDCAVL 972
Query: 906 HAVL 909
A+L
Sbjct: 973 SAIL 976
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 934 (333.8 bits), Expect = 7.9e-150, Sum P(3) = 7.9e-150
Identities = 206/462 (44%), Positives = 294/462 (63%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 763
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 764 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 822
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N + +
Sbjct: 823 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVE----Q 878
Query: 955 TD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
TD ++Y + +++ +CT V P LL +I++
Sbjct: 879 TDFHYNWLIY-HLKMRTSSIYLYDCTEVSPYCLLFFGGDISI 919
Score = 510 (184.6 bits), Expect = 7.9e-150, Sum P(3) = 7.9e-150
Identities = 116/277 (41%), Positives = 178/277 (64%)
Query: 130 EKLDANQSRKSDKTRGKR-VDIFCKPKMSKAEIAMKVES-LTSRIEKDAN-LRQIVEE-- 184
EK NQ +K + R + +D + + + E ++ L ++K N LR I +
Sbjct: 144 EKKLINQEKKMFRIRNRSYIDRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRYIEMQHF 203
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD- 322
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P +S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 323 ----------PY---LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
Score = 55 (24.4 bits), Expect = 7.9e-150, Sum P(3) = 7.9e-150
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 1036 GENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHP 1085
G+ + + T+ VD W+ F S A + LR+ L + + K+ P
Sbjct: 915 GDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESP 964
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 931 (332.8 bits), Expect = 2.1e-149, Sum P(3) = 2.1e-149
Identities = 201/470 (42%), Positives = 295/470 (62%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 443 LEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFI 501
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D
Sbjct: 502 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQ 561
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 562 NNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 621
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL K +DPP + AI L ++ AL E++T LG L L V
Sbjct: 622 LQIKILKLG-GIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVE 680
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + EL+ +SD
Sbjct: 681 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELSK--NTKSD 736
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AF W+ ++RG E +C +YF+S + ML M+ Q L+ GF+
Sbjct: 737 HLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRD 796
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ ++ AV+ AGLYP VA++RP R+ V+ T V +HP S+
Sbjct: 797 PKDPKS-NTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSV 855
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
N + +T+ +VY + +++ +CT V P LL +I++
Sbjct: 856 NVE----ETEFHYNWLVY-HLKMRTSSIYLYDCTEVSPYCLLFFGGDISI 900
Score = 506 (183.2 bits), Expect = 2.1e-149, Sum P(3) = 2.1e-149
Identities = 136/375 (36%), Positives = 214/375 (57%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
++L RE + + +K G SK + R Q+R V ++R E +I+ L +
Sbjct: 43 SHLKGREIGLWY--ARKQGQKSKETDR--QQRAVVRMDERREE-----QIVQLLNAVQPR 93
Query: 111 KLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTS 170
Q+ + + D E G + K + ++ + +P + K + VE L
Sbjct: 94 AEKEQEAMSWWSGD--EEGHVPEQPPKVKPGAEKAEKAPVKRRPILQKTFLDQDVEYLFE 151
Query: 171 RIEKDANL-RQIVEE----------------RSKLPISSF--KDVITSTVDSNQVVLISG 211
+ ++DA+L Q+ E+ R KLP K + + +++N+V +ISG
Sbjct: 152 KNDQDADLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQKQELVNLINNNRVTVISG 211
Query: 212 ETGCGKTTQVPQFLLE-HIW-SKGETCKIVCTQPRRISATSVAERISVERGENIGD--NI 267
ETGCGKTTQV QF+L+ +I KG TC+IVCTQPRRISA SVAER++ ER E G+ +
Sbjct: 212 ETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKST 271
Query: 268 GYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEI 326
GY+IRL+S+ K SI++CT G++L+ L S+K +S+++H+++DEI
Sbjct: 272 GYQIRLQSRLPRKQGSILYCTTGIVLQWL----------QSDK----HLSSISHVVLDEI 317
Query: 327 HERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSF 386
HER+ SD +++II+D+L L++ILMSATL+A++FS+YF CP+I +PGFT+PV +
Sbjct: 318 HERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEY 377
Query: 387 YLEDVLSILKSAESN 401
LEDV+ L+ N
Sbjct: 378 LLEDVIEKLRYTPEN 392
Score = 58 (25.5 bits), Expect = 2.1e-149, Sum P(3) = 2.1e-149
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 1024 CMEIDDKTSGQHGENVMSSPDKSV-TVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKV 1082
C E+ G ++ DK T+ VD W+ F S A + LR+ L + K+
Sbjct: 883 CTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKNLRQELDDLLQEKI 942
Query: 1083 THP 1085
+P
Sbjct: 943 ENP 945
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 874 (312.7 bits), Expect = 1.4e-148, Sum P(2) = 1.4e-148
Identities = 178/395 (45%), Positives = 258/395 (65%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP-- 585
++LL Y + + E +DL LI LL IC + GAIL+FLPG+++I RDR+L +
Sbjct: 588 RELLKAYHHSFDDEKVDLDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLRDRILFDDKR 647
Query: 586 FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
F +T ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG+
Sbjct: 648 FADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGK 707
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEI 705
+KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+
Sbjct: 708 VKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPEL 767
Query: 706 KRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TEL
Sbjct: 768 LRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTEL 827
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A +
Sbjct: 828 GYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKR 887
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
+ G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR QL +L
Sbjct: 888 FTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRA 945
Query: 885 NGFIPE----DVSSCSHNARVPGIIHAVLMAGLYP 915
+GF+ D+ + N+ ++ A L+AG+YP
Sbjct: 946 SGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYP 980
Score = 598 (215.6 bits), Expect = 1.4e-148, Sum P(2) = 1.4e-148
Identities = 140/370 (37%), Positives = 210/370 (56%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 40 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 99
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K K ET + + + +K ++ L +P + E E L +
Sbjct: 100 TV-KKKDGSET---AHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 148
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 149 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 206
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 207 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 266
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ G S L S +TH+I
Sbjct: 267 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-GDSTL------------STVTHVI 313
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 314 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 373
Query: 383 VKSFYLEDVL 392
VK +LED+L
Sbjct: 374 VKEMFLEDIL 383
Score = 203 (76.5 bits), Expect = 3.9e-71, Sum P(2) = 3.9e-71
Identities = 58/175 (33%), Positives = 93/175 (53%)
Query: 425 LDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLS 483
+D +S W + + D ++ L + NV +Y+H+ T T LMV AG+G V L+S
Sbjct: 468 MDACLSDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLIS 527
Query: 484 LGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHM---------ENAL-----SD--SMK 527
+GA+ KA +G AL + Q E+ +++ + E++L SD +
Sbjct: 528 MGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVHTNGSDLSAED 587
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
++LL Y + + E +DL LI LL IC + GAIL+FLPG+++I RDR+L
Sbjct: 588 RELLKAYHHSFDDEKVDLDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLRDRIL 642
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 857 (306.7 bits), Expect = 3.3e-147, Sum P(2) = 3.3e-147
Identities = 188/447 (42%), Positives = 272/447 (60%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
ID+ L+E + IC GAILVFL GW++I+K +++ N F D+SKF+++PLH +
Sbjct: 485 IDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSM 544
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q+++F RPPP RKI+L+TNIAE++ITIDDVVYV+D G+ KE SYD N V+ L
Sbjct: 545 PTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLP 604
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR QAG+CY LY ++ + P +Q+PEI R P++ELCL +K L
Sbjct: 605 SWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQV 664
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+I FL K L PP ++ + NAI +L+ IGAL+ E++T LG L L V P + KML
Sbjct: 665 G-SIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLL 723
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ C++PALT+A A YR PF LP+ N K+ A AK A SD +A++ A+
Sbjct: 724 IGAIFQCVNPALTIAAALAYRSPFVLPL--NRKEEADEAKRYFAG--DSCSDHIALLKAY 779
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP 902
E +++AK+ G E FC Q F+S + M+ MR Q L GF+ + + +
Sbjct: 780 EGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYD 839
Query: 903 -GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLM 961
+I AVL AGLYP V + + K + + G KV +HP S+N +++ P +
Sbjct: 840 MEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELG--KVDIHPGSVNARVNLFSL---PYL 894
Query: 962 VYDEITRGDGGMHVRNCTVVGPLPLLL 988
VY E + +++R+ T + LL+
Sbjct: 895 VYSEKVKTTS-VYIRDSTNISDYALLM 920
Score = 602 (217.0 bits), Expect = 3.3e-147, Sum P(2) = 3.3e-147
Identities = 151/392 (38%), Positives = 220/392 (56%)
Query: 52 NLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVS-VCKSKKRVETDKGK-EILPSLTFSEG 109
N S ++ + ++ +MG+ + +GK VS V R + D+ + S
Sbjct: 87 NFSRGDQQTLSDMALQMGLYFHAYNKGKALVVSKVPLPDYRADLDERHGSTQKEIKMSTE 146
Query: 110 SKLVLQDLFTHYPPDDGEPGEKLDA-NQSRKSDKTRG-KRVDIFCK-P-KMSKAEIAMKV 165
++ L L + G G A N + T G KR D K P + K + + +
Sbjct: 147 TERKLGSLLKT-TQESGSSGASASAFNDQQDRTSTLGLKRPDSASKLPDSLEKEKFSFAL 205
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
+ +++ +++ + R KLP K+ ++V NQV+++SGETGCGKTTQ+PQF+
Sbjct: 206 KERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFI 265
Query: 226 LEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSI 283
LE S +G C I+CTQPRRISA SVA RIS ERGE+IG+++GY+IRLESK + +
Sbjct: 266 LEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRL 325
Query: 284 VFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM 343
+FCT GVLLR L+ P +VS H++VDEIHER DF+L I+RD+
Sbjct: 326 LFCTTGVLLRRLIED-----------PNLTNVS---HLLVDEIHERGMNEDFLLIILRDL 371
Query: 344 LPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI----LKSAE 399
LP P LRLILMSAT++AD FS YFG P + +PGFT+PV +LEDVL +KS++
Sbjct: 372 LPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIKSSD 431
Query: 400 SNHLDSASLIVPNEDPELTEENKSTLDEAISL 431
S + +S E E +++ +TL E I +
Sbjct: 432 SGNYQGSSRGRRRES-ESKKDDLTTLFEDIDI 462
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 905 (323.6 bits), Expect = 1.9e-146, Sum P(3) = 1.9e-146
Identities = 204/512 (39%), Positives = 309/512 (60%)
Query: 507 QPEVAQIIKKHMEN--ALSDSMKQQLLDKYLATV----NPELIDLVLIEQLLRKICMDSE 560
+PE +I K+ E+ + +++ + D + + + + IDL L L+R I ++
Sbjct: 442 RPEKGKIEAKYHESWPCYARTLRDRFSDTTIEVLGMMDDDDNIDLELTAALIRHIAVNEN 501
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTS-KFVIIPLHSMVPSVQQKKV-------FK 612
+GAILVFLPGW++I+ D L+++ F+ +F+IIPLHS++P+V Q +V FK
Sbjct: 502 EGAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQTQVISLFPQVFK 561
Query: 613 RPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQ 672
+PPPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ T+ + WVS A+AKQ
Sbjct: 562 KPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQ 621
Query: 673 RAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQK 732
R GRAGR G CYHLY+ LRA+ L ++Q+PEI+R P+EELCLQ+K+L I FLQK
Sbjct: 622 RKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKVLKLG-PIATFLQK 680
Query: 733 TLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDP 792
T+DPP I AI L D+ AL DEK+T LG L + V P + KM+ F L+ CLDP
Sbjct: 681 TMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDP 740
Query: 793 ALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG 852
LT+A + ++DPF +P+ K++ + ++ S +SD L+++ AF W++AK++G
Sbjct: 741 VLTIAASLSFKDPFFIPLG---KEKIADQRRKMFS-QNSRSDHLSIVNAFLGWEDAKRQG 796
Query: 853 Q--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIH 906
E +C F+S+ + ML M+ Q L++ GF+ P+D SS + N+ ++
Sbjct: 797 SRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKDPKDPSS-NINSENKKLVK 855
Query: 907 AVLMAGLYPMVARLRPPHKNGRRF---VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVY 963
AV++AGLYP VA++ P H R V T KV +HP S+N + + +VY
Sbjct: 856 AVIVAGLYPKVAKISPSHNKKRPMPVKVYTKADGKVCIHPKSVNAE---ETQFQYKWLVY 912
Query: 964 DEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+ + + +CT V P LL I++
Sbjct: 913 -HLKMKTTSIFLYDCTEVSPFSLLFFGGNISI 943
Score = 507 (183.5 bits), Expect = 1.9e-146, Sum P(3) = 1.9e-146
Identities = 117/338 (34%), Positives = 202/338 (59%)
Query: 79 KQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGE------PGEKL 132
+ R + + V+ D G+++ PS + S +K + +++ DD P K+
Sbjct: 96 ESREKHITQLLNTVQRDLGRDVHPSTSQSWRNKDEARG-HSYFDGDDPVETQNIMPLPKV 154
Query: 133 DANQSRKSD--KTRGKRVDIFCKPKMSKA-EIAMKVESLTSRIEKDANLRQ-------IV 182
+ ++ D K+R + + + + +++ L ++KD ++ ++
Sbjct: 155 EPKDEKQEDAIKSRASLKEELNETNLEYLLQDVVQIPFLDEELKKDQQKKEDNAAYIEML 214
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVC 240
+ R KLP ++ + + +N+V++ISGETGCGKTTQV QF+L+ +G+ C++VC
Sbjct: 215 KFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCRVVC 274
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++VER E +G+ + GY+IRL+S+ K S+++CT GV+L+ L S
Sbjct: 275 TQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHS 334
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P +S++TH+++DEIHER SD ++ I++D+L + L+++LMSA
Sbjct: 335 D-----------PY---LSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSA 380
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
TL+A++FS+YF CP+I +PG+T+PV + LEDV+ +L
Sbjct: 381 TLNAEKFSKYFNNCPMIHIPGYTFPVTEYLLEDVVELL 418
Score = 55 (24.4 bits), Expect = 1.9e-146, Sum P(3) = 1.9e-146
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 1024 CMEIDDKTSGQHGENVMSSPDKSV-TVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKV 1082
C E+ + G N+ D+ T+ VD W+ F S + L++ L V + K+
Sbjct: 926 CTEVSPFSLLFFGGNISIQRDQDQDTIAVDEWIVFQSPGRIAHLVKDLKKELDVLLEEKI 985
Query: 1083 THP 1085
P
Sbjct: 986 KSP 988
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 864 (309.2 bits), Expect = 2.0e-145, Sum P(3) = 2.0e-145
Identities = 177/395 (44%), Positives = 256/395 (64%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP-- 585
++LL Y + + E +DL LI LL IC AIL+FLPG+++I RDR+L +
Sbjct: 589 RELLKAYHHSFDDEKVDLDLIMHLLYNICHGCHKCAILIFLPGYDEIVGLRDRILFDDKR 648
Query: 586 FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
F +T ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG+
Sbjct: 649 FADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGK 708
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEI 705
+KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+
Sbjct: 709 VKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPEL 768
Query: 706 KRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TEL
Sbjct: 769 LRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTEL 828
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A +
Sbjct: 829 GYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKR 888
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
+ G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR QL +L
Sbjct: 889 FTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRA 946
Query: 885 NGFIPE----DVSSCSHNARVPGIIHAVLMAGLYP 915
+GF+ D+ + N+ ++ A L+AG+YP
Sbjct: 947 SGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYP 981
Score = 590 (212.7 bits), Expect = 2.0e-145, Sum P(3) = 2.0e-145
Identities = 140/371 (37%), Positives = 211/371 (56%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 40 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 99
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K K ET + + + +K ++ L +P + E E L +
Sbjct: 100 TV-KKKDGSET---AHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 148
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 149 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 206
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 207 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 266
Query: 263 IGDNIGYKIRLESKGGKHSSIV-FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHI 321
IG IGY+IRLES+ +++ FCTNGVLLR L++ G S L S +TH+
Sbjct: 267 IGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMA-GDSTL------------STVTHV 313
Query: 322 IVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTY 381
IVDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 314 IVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPF 373
Query: 382 PVKSFYLEDVL 392
VK +LED+L
Sbjct: 374 EVKEMFLEDIL 384
Score = 193 (73.0 bits), Expect = 6.1e-69, Sum P(3) = 6.1e-69
Identities = 57/175 (32%), Positives = 91/175 (52%)
Query: 425 LDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLS 483
+D +S W + + D ++ L + NV +Y+H+ T T LMV AG+G V L+S
Sbjct: 469 MDACLSDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLIS 528
Query: 484 LGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHM---------ENAL-----SD--SMK 527
+GA+ KA +G AL + Q E+ +++ + E++L SD +
Sbjct: 529 MGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVHTNGSDLSAED 588
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
++LL Y + + E +DL LI LL IC AIL+FLPG+++I RDR+L
Sbjct: 589 RELLKAYHHSFDDEKVDLDLIMHLLYNICHGCHKCAILIFLPGYDEIVGLRDRIL 643
Score = 55 (24.4 bits), Expect = 2.0e-145, Sum P(3) = 2.0e-145
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 1051 VDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS 1110
+D WL F + + LR++ L ++ P K V EA++ A+ ++LS + S
Sbjct: 1053 LDEWLNFKLDPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQS 1112
Query: 1111 -GISLPA 1116
G+ P+
Sbjct: 1113 AGLQQPS 1119
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 915 (327.2 bits), Expect = 1.3e-143, Sum P(2) = 1.3e-143
Identities = 196/413 (47%), Positives = 272/413 (65%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 384 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 442
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 443 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 502
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 503 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 562
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 563 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 621
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 622 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 677
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 678 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 736
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLN 947
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N
Sbjct: 737 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN 789
Score = 510 (184.6 bits), Expect = 1.3e-143, Sum P(2) = 1.3e-143
Identities = 116/277 (41%), Positives = 178/277 (64%)
Query: 130 EKLDANQSRKSDKTRGKR-VDIFCKPKMSKAEIAMKVES-LTSRIEKDAN-LRQIVEE-- 184
EK NQ +K + R + +D + + + E ++ L ++K N LR I +
Sbjct: 58 EKKLINQEKKMFRIRNRSYIDRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRYIEMQHF 117
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 118 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 177
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 178 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD- 236
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P +S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 237 ----------PY---LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 283
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 284 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 320
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 840 (300.8 bits), Expect = 8.9e-142, Sum P(3) = 8.9e-142
Identities = 194/467 (41%), Positives = 282/467 (60%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ +
Sbjct: 459 IDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDT------ 512
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
+ Q VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+
Sbjct: 513 -------IGQ--VFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNI 563
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+
Sbjct: 564 STMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQI 623
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+L I FL + +DPP + +I L ++ AL E++T LG L L V P +
Sbjct: 624 KILRLG-GIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHI 682
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L
Sbjct: 683 GKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTKSDHLT 738
Query: 838 VIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PED 891
V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D
Sbjct: 739 VVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKD 798
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFK 949
S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N +
Sbjct: 799 PKS-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVE 857
Query: 950 LSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+T+ ++Y + +++ +CT V P LL +I++
Sbjct: 858 ----QTEFHYNWLIY-HLKMRTSSIYLYDCTEVSPYCLLFFGGDISI 899
Score = 534 (193.0 bits), Expect = 8.9e-142, Sum P(3) = 8.9e-142
Identities = 119/279 (42%), Positives = 184/279 (65%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK +Q +++ + R K +D + + + E +A+ + L +K ++LR I +
Sbjct: 136 ENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVALDQQLLEDLRKKKSDLRYIEMQ 195
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIW-SKGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L+ +I KG C+IVC
Sbjct: 196 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVC 255
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 256 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 315
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
S L S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 316 D--SHL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSA 361
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 362 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 400
Score = 52 (23.4 bits), Expect = 8.9e-142, Sum P(3) = 8.9e-142
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 1036 GENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHP 1085
G+ + + T+ VD W+ F S A + LR+ L + K+ P
Sbjct: 895 GDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDTLLQEKIESP 944
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 843 (301.8 bits), Expect = 5.3e-140, Sum P(3) = 5.3e-140
Identities = 196/462 (42%), Positives = 279/462 (60%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-------------- 515
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
S +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 516 -SGTMSQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 574
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 575 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 634
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 635 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 693
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 694 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 749
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 750 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 808
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N + +
Sbjct: 809 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVE----Q 864
Query: 955 TD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
TD ++Y + +++ +CT V P LL +I++
Sbjct: 865 TDFHYNWLIY-HLKMRTSSIYLYDCTEVSPYCLLFFGGDISI 905
Score = 510 (184.6 bits), Expect = 5.3e-140, Sum P(3) = 5.3e-140
Identities = 116/277 (41%), Positives = 178/277 (64%)
Query: 130 EKLDANQSRKSDKTRGKR-VDIFCKPKMSKAEIAMKVES-LTSRIEKDAN-LRQIVEE-- 184
EK NQ +K + R + +D + + + E ++ L ++K N LR I +
Sbjct: 144 EKKLINQEKKMFRIRNRSYIDRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRYIEMQHF 203
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD- 322
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P +S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 323 ----------PY---LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
Score = 55 (24.4 bits), Expect = 5.3e-140, Sum P(3) = 5.3e-140
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 1036 GENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHP 1085
G+ + + T+ VD W+ F S A + LR+ L + + K+ P
Sbjct: 901 GDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESP 950
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 922 (329.6 bits), Expect = 1.2e-138, Sum P(3) = 1.2e-138
Identities = 223/611 (36%), Positives = 339/611 (55%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF- 586
++LL Y + + E +DL LI LL IC + GA+L+FLPG+++I RDR+L +
Sbjct: 309 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKR 368
Query: 587 FRDT--SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSG 644
F D S++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG
Sbjct: 369 FADNTHSRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSG 428
Query: 645 RMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPE 704
++KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE
Sbjct: 429 KVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPE 488
Query: 705 IKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
+ R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TE
Sbjct: 489 LLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTE 548
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A +
Sbjct: 549 LGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRK 608
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
+ G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR QL +L
Sbjct: 609 RFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 666
Query: 884 KNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAK- 938
+GF+ D+ + N+ ++ A L+AG+YP + H + V T K
Sbjct: 667 ASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENVVLTGPKEKK 721
Query: 939 VRLHPHSLNFKLSFKKTDDC----------PL--MVYDEITRGDGGMHVRNCTVVGPLPL 986
VR HP S+ + +KK P ++YDE+TR ++R C+ V P+ +
Sbjct: 722 VRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTV 781
Query: 987 LLLATEIAVAPAPXXXXXXXXXXXXXXXXXXXXXXXXCMEIDDKTSGQHGENVMSSPDKS 1046
L+ P E++D+T+ N+
Sbjct: 782 LVFC-------GPARLASNALQEPSSFRADGIPNDSSDSEMEDRTTA----NL------- 823
Query: 1047 VTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSY 1106
T+ +D WL F + + LR++ L ++ P K V EA++ A+ ++LS
Sbjct: 824 ATLKLDEWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLST 883
Query: 1107 DG-FSGISLPA 1116
+ +G+ P+
Sbjct: 884 EEQAAGLQQPS 894
Score = 268 (99.4 bits), Expect = 1.2e-138, Sum P(3) = 1.2e-138
Identities = 61/145 (42%), Positives = 88/145 (60%)
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
+ FCTNGVLLR L++ G S L S +TH+IVDE+HERDR+SDF+L +RD
Sbjct: 8 LTFCTNGVLLRTLMA-GDSTL------------STVTHVIVDEVHERDRFSDFLLTKLRD 54
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
+L +P L+LIL SA LD + F +YFG CPVI + G + VK +LED+L +
Sbjct: 55 LLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDIL------RTTG 108
Query: 403 LDSASLIVPNEDPELTEENKSTLDE 427
+ ++ ++ + E+ +STL E
Sbjct: 109 YTNKEMLKYKKEKQREEKQQSTLTE 133
Score = 203 (76.5 bits), Expect = 1.2e-138, Sum P(3) = 1.2e-138
Identities = 57/175 (32%), Positives = 93/175 (53%)
Query: 425 LDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLS 483
+D +S W + + D ++ L + NV +Y+H+ T T LMV AG+G V L+S
Sbjct: 189 MDACLSDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLIS 248
Query: 484 LGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHM---------ENAL-----SD--SMK 527
+GA+ KA +G AL + Q E+ +++ + E++L SD +
Sbjct: 249 MGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAED 308
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
++LL Y + + E +DL LI LL IC + GA+L+FLPG+++I RDR+L
Sbjct: 309 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRIL 363
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 774 (277.5 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
Identities = 173/505 (34%), Positives = 285/505 (56%)
Query: 493 KDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLL 552
K +T QL ++ + ++ ++++ + + +S + D L++ P+ I LIE +L
Sbjct: 472 KTWKTQKQLMPRKRKNQITTLVEEALSKSNFESYNSRTRDS-LSSWMPDCIGFNLIEAVL 530
Query: 553 RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
IC GA+LVFL GW+DI D++ A+P D ++ +++ H + + +Q+ +F+
Sbjct: 531 CHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFE 590
Query: 613 RPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQ 672
R PP RKI+L+TN+AE +ITI+DVV+V+D G+ KE +YD NN L SW+S+ASA+Q
Sbjct: 591 RAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQ 650
Query: 673 RAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQK 732
R GRAGR G CYHLY + + ++Q+PE+ R P+ LCLQ+K L +I +FL
Sbjct: 651 RRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVE-SIAEFLSA 709
Query: 733 TLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDP 792
L P S+ ++NAI L+ IGAL E +T+LG+ L L V P + KML + C DP
Sbjct: 710 ALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDP 769
Query: 793 ALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG 852
LT+ RDPF LP ++K A +AK ++ SD +A++ AFE WK+A++ G
Sbjct: 770 ILTIVSGLSVRDPFLLP--QDKKDLALSAKLRFSAK--DYSDHMALVRAFEGWKDAEREG 825
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS---SCSHNARVPGIIHAVL 909
FC + F+S+ + + +RKQ L + G + +D++ SHN ++ AV+
Sbjct: 826 SAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQ---SLVRAVI 882
Query: 910 MAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRG 969
+GL+P +A + H+ +T +V L+ +S+N + T P +V+ E +
Sbjct: 883 CSGLFPGIASV--VHRETSMSFKTMDDGQVSLYANSVNSRFP---TIPYPWLVFGEKVKV 937
Query: 970 DGGMHVRNCTVVGPLPLLLLATEIA 994
+ + +R+ T V L+L ++
Sbjct: 938 NAVL-IRDSTGVPDSSLILFGGSLS 961
Score = 582 (209.9 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
Identities = 130/373 (34%), Positives = 221/373 (59%)
Query: 42 SKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGK-QRRVSVCKSKKRVETDKG-KE 99
S+ E+ + D R+ + + K+MG+ S+ G+ +V + + ++ + +E
Sbjct: 109 SEQEIVSRDKR-DRRDYEQISNLAKRMGLYSEIYGKVVVASKVPLPNYRPDLDDKRPQRE 167
Query: 100 ILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKL-DANQSRKSDKTRGKRVDIFCKPKMSK 158
++ L+ + +LQ+ G+ E + D+ +++++ + D F + +
Sbjct: 168 VVLPLSLQRRVEGLLQEHLDSQQLSSGKANECVADSQPPKQTEELPDENSDSFLDGSVME 227
Query: 159 AEI---AMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+ +M++ ++ ++ R ++E R LP K+ + + NQV+++SGETGC
Sbjct: 228 KVLQRRSMRMRNMQRTWQESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGC 287
Query: 216 GKTTQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQ+PQ++LE I S +G C I+CTQPRRISA +V+ER+S ERGE +G+ +G+K+RL
Sbjct: 288 GKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRL 347
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
E GK++ ++FCT+G+LLR L+S +++ +TH+ VDEIHER
Sbjct: 348 EGMRGKNTHLLFCTSGILLRRLLSDR--------------NLNGVTHVFVDEIHERGMNE 393
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
DF++ +++++LP P LRL+LMSATL+A+ FS Y+GG P I +PGFT+PVK+ +LEDVL
Sbjct: 394 DFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLE 453
Query: 394 IL--KSAESNHLD 404
I K N +D
Sbjct: 454 ITGYKLTSFNQVD 466
Score = 46 (21.3 bits), Expect = 1.0e-131, Sum P(3) = 1.0e-131
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 1029 DKTSGQHGENVMSSPD 1044
D ++GQH E+ S PD
Sbjct: 1127 DNSTGQHNEDADSPPD 1142
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 762 (273.3 bits), Expect = 1.3e-127, Sum P(2) = 1.3e-127
Identities = 166/460 (36%), Positives = 263/460 (57%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ +P+ I LIE +L I GA+LVF+ GW+DIN +++L A+ D +K +
Sbjct: 552 LSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVL 611
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G+ KE SYD
Sbjct: 612 LLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDAL 671
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SKA+A+QR GRAGR G CYHLY + + D+Q PE+ R P++ LC
Sbjct: 672 NNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLC 731
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L PP +++++NA+ L+ IGAL DE +T LG+ L L V
Sbjct: 732 LQIKSLGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVE 790
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP +T+ RDPF +P + +KF Y SD
Sbjct: 791 PKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRD-Y---SD 846
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
L ++ A+ WK+A++ +C + F+SS + + MRKQ L+K + +++
Sbjct: 847 HLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNIEG 905
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
CS + ++ A++ AG++P V + +K ++T +V L+ S+N +
Sbjct: 906 CSKLSHDEHLVRAIICAGMFPGVCSV--VNKEKSITLKTMEDGQVLLYSSSVNGNVPMIP 963
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V+++ + + + +R+ T V LLL +I+
Sbjct: 964 F---PWLVFNDKVKVNS-VFLRDSTAVSDSVLLLFGDKIS 999
Score = 566 (204.3 bits), Expect = 1.3e-127, Sum P(2) = 1.3e-127
Identities = 111/216 (51%), Positives = 154/216 (71%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETC 236
+++V R LP KD + + +NQVV++SGETGCGKTTQ+PQ++LE I + +G TC
Sbjct: 290 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 349
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL 409
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R + +TH++VDEIHER DF+L +++D+LP P L+LILMS
Sbjct: 410 ---VDR-----------SLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMS 455
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+A+ FS YFGG P + +PGFTYPV++ +LED L
Sbjct: 456 ATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYL 491
Score = 41 (19.5 bits), Expect = 3.3e-72, Sum P(2) = 3.3e-72
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 81 RRVSVCKSKKRVETDKGKEILPSLTF 106
RR+S +RV ++G++I S+ +
Sbjct: 357 RRISAISVSERVAAERGEQIGESVGY 382
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 716 (257.1 bits), Expect = 2.7e-120, Sum P(2) = 2.7e-120
Identities = 165/457 (36%), Positives = 257/457 (56%)
Query: 540 PELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH 599
P+ I LIE LL IC + G IL+FL GW+DI+ +++L +P F + +++ H
Sbjct: 477 PDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACH 536
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
+ + +Q+ +F+ P G RKI+L+TNIAET+ITI+DV +VID G+ KE SYD NN
Sbjct: 537 GSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPC 596
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L SW+SK SA+QR GRAGR + G CYHLY + + ++Q+PEI R P+ LCLQ+K
Sbjct: 597 LLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKS 656
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
L+ +I +FL + L P + ++ AI L+ IGAL +E +T LG L L + P + K
Sbjct: 657 LNLG-SISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGK 715
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR-ATAAKFELASLYGGQSDQLAV 838
ML ++ CLDP LT+A RDPF ++P +KK A AAK + + SD LA+
Sbjct: 716 MLILGAILGCLDPILTVAAGLSVRDPF---LTPQDKKDLAEAAKSQFSR---DHSDHLAL 769
Query: 839 IAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN 898
+ A+E WK A++ +C + F+S + + +RK+ + L G I + S C+
Sbjct: 770 VRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSE 829
Query: 899 ARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAKVRLHPHSLNFKLSFKKTDD 957
+ AV+ G+YP + + H N R F ++T +V L+ +S N + +
Sbjct: 830 GNDANLTRAVICYGMYPGICSV--VH-NERSFSLKTMEDGQVLLYSNSENAR---ETKIP 883
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V++E + + + +R+ T L+L I+
Sbjct: 884 YPWLVFNEKIKVNS-VFLRDSTACSDSTLILFGGSIS 919
Score = 544 (196.6 bits), Expect = 2.7e-120, Sum P(2) = 2.7e-120
Identities = 108/220 (49%), Positives = 155/220 (70%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETC 236
+++++ R+ LP + + + + NQV++ISGETGCGKTTQ+PQF+LE I + +G
Sbjct: 211 QRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFS 270
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 271 SIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLL 330
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L I++D+L L+LILMS
Sbjct: 331 ---VDR-----------NLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMS 376
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
ATLDA+ FS YFGG VI +PGFTYPV+S +LED+L + +
Sbjct: 377 ATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTR 416
Score = 54 (24.1 bits), Expect = 5.1e-49, Sum P(2) = 5.1e-49
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEG 449
DP LT ++K L EA +S D D L + + EG
Sbjct: 740 DPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEG 775
Score = 38 (18.4 bits), Expect = 6.5e-67, Sum P(2) = 6.5e-67
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 81 RRVSVCKSKKRVETDKGKEILPSLTFS---EGSK 111
RR+S +RV ++G+++ S+ + EG K
Sbjct: 278 RRISAMSVSERVAYERGEQLGESVGYKVRLEGVK 311
Score = 37 (18.1 bits), Expect = 8.3e-67, Sum P(2) = 8.3e-67
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 490 LKAKDGRTALQLGEQENQPEVAQII--KKHMENALSDSMKQQLLDK 533
+ A D R + QE A + K L DS+KQ+++ +
Sbjct: 34 VSAYDDRVSEDRQPQEGTFHCADLDDWNKRFSMLLKDSLKQEVISR 79
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 701 (251.8 bits), Expect = 8.7e-119, Sum P(2) = 8.7e-119
Identities = 168/471 (35%), Positives = 261/471 (55%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
++DL LI L+ +I E G IL FLPGW++I + RLL S+++++P+HS
Sbjct: 692 VLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLL-EMLGSQNSRYLVLPVHSN 750
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P + Q+ +F+RPPPG RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L+
Sbjct: 751 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 810
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+ WVSK++ QR GRAGRCQ+G YHL+ + R +P +QVPEI R P+E L +Q K+
Sbjct: 811 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHM 870
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
P +FL K LD P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 871 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAI 930
Query: 782 FFAILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
A + CL P L + +C + RDPF+ + + AK L+ G SD LA +
Sbjct: 931 VLASIYRCLHPLLVIVSCLT--RDPFSSSLQ--NRAEVDKAKAVLSRESG--SDHLAFVR 984
Query: 841 AFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI--PEDV--- 892
A W+ ++R A + Y++ + + G+ KQ L + + P D
Sbjct: 985 AVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMP 1044
Query: 893 -SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
S C+ + ++ VLMAGLYP + ++R + G+ + V LH +
Sbjct: 1045 SSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRTKAGTVLLHKST 1104
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA-TEIAV 995
+N + S + + Y + +GG+ VR+ + V PL +LL+ T+I V
Sbjct: 1105 INREASKLYSR---WLTYFMAVKSNGGVFVRDSSQVHPLAVLLMTDTDIHV 1152
Score = 551 (199.0 bits), Expect = 8.7e-119, Sum P(2) = 8.7e-119
Identities = 132/357 (36%), Positives = 203/357 (56%)
Query: 55 NRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVL 114
N+ A+ + K +G+ K++ ++ ++ E + K + E + +
Sbjct: 349 NKAAALACQKLKSLGLVDKNNNPLSHAMYNMTSLRELGENQR-KPC--HIKVPEATLRKI 405
Query: 115 QDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVD-IFCK---PKMSKAEIAMKVESLTS 170
++ HYP D E ++ A+ K G D I K P + E+ + ++L +
Sbjct: 406 ENYLNHYPVDIRESRPRI-ADDMMNLSKESGAISDAITGKTYIPMLEAEEVRLS-QNLLA 463
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-- 228
++ + Q E LP+ KD I S ++ N VV+I+G+TGCGKTT++PQ LLEH
Sbjct: 464 LWKRRGSSWQ---ESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYI 520
Query: 229 IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C +V TQPRRISA SVA+R++ E G N+ N+GY++RLESK + +++FCT
Sbjct: 521 LEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCT 580
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L QG P+ + VS H++VDE+HERD +DF+L +++ +
Sbjct: 581 VGILLRKL--QG---------NPSLEGVS---HVVVDEVHERDVNTDFLLILLKGIQKLN 626
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLD 404
P LRL+LMSAT D RFS YFGGCPV++VPGF YPVK +YLE++L+ L H +
Sbjct: 627 PDLRLVLMSATGDNQRFSHYFGGCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYE 683
Score = 38 (18.4 bits), Expect = 7.2e-48, Sum P(2) = 7.2e-48
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 1123 TSMIQATEIDKCPAARNRGTGQNPSNFLMSLMSPNTRQYFPLRDHKSR 1170
+S+ E+DK A +R +G + F+ ++ + RD ++R
Sbjct: 956 SSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAG--WEEVLRRRDSRAR 1001
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 701 (251.8 bits), Expect = 4.8e-118, Sum P(2) = 4.8e-118
Identities = 168/471 (35%), Positives = 261/471 (55%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
++DL LI L+ +I E G IL FLPGW++I + RLL S+++++P+HS
Sbjct: 692 VLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLL-EMLGSQNSRYLVLPVHSN 750
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P + Q+ +F+RPPPG RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L+
Sbjct: 751 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 810
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+ WVSK++ QR GRAGRCQ+G YHL+ + R +P +QVPEI R P+E L +Q K+
Sbjct: 811 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHM 870
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
P +FL K LD P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 871 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAI 930
Query: 782 FFAILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
A + CL P L + +C + RDPF+ + + AK L+ G SD LA +
Sbjct: 931 VLASIYRCLHPLLVIVSCLT--RDPFSSSLQ--NRAEVDKAKAVLSRESG--SDHLAFVR 984
Query: 841 AFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI--PEDV--- 892
A W+ ++R A + Y++ + + G+ KQ L + + P D
Sbjct: 985 AVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMP 1044
Query: 893 -SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
S C+ + ++ VLMAGLYP + ++R + G+ + V LH +
Sbjct: 1045 SSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRTKAGTVLLHKST 1104
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA-TEIAV 995
+N + S + + Y + +GG+ VR+ + V PL +LL+ T+I V
Sbjct: 1105 INREASKLYSR---WLTYFMAVKSNGGVFVRDSSQVHPLAVLLMTDTDIHV 1152
Score = 544 (196.6 bits), Expect = 4.8e-118, Sum P(2) = 4.8e-118
Identities = 131/357 (36%), Positives = 202/357 (56%)
Query: 55 NRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVL 114
N+ A+ + K +G+ K++ ++ ++ E + K + E + +
Sbjct: 349 NKAAALACQKLKSLGLVDKNNNPLSHAMYNMTSLRELGENQR-KPC--HIKVPEATLRKI 405
Query: 115 QDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVD-IFCK---PKMSKAEIAMKVESLTS 170
++ HYP D E ++ A+ K G D I K P + E+ + ++L +
Sbjct: 406 ENYLNHYPVDIRESRPRI-ADDMMNLSKESGAISDAITGKTYIPMLEAEEVRLS-QNLLA 463
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-- 228
++ + Q E LP+ KD I S ++ N VV+I+G+TGCGKTT++PQ LLEH
Sbjct: 464 LWKRRGSSWQ---ESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYI 520
Query: 229 IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C +V TQPRRISA SVA+R++ E G N+ N+GY++RLESK + +++FCT
Sbjct: 521 LEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCT 580
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L QG P+ + VS H++VDE+HERD +DF+L +++ +
Sbjct: 581 VGILLRKL--QG---------NPSLEGVS---HVVVDEVHERDVNTDFLLILLKGIQKLN 626
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLD 404
P LRL+LMSAT D RFS YFG CPV++VPGF YPVK +YLE++L+ L H +
Sbjct: 627 PDLRLVLMSATGDNQRFSHYFGDCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYE 683
Score = 38 (18.4 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 1123 TSMIQATEIDKCPAARNRGTGQNPSNFLMSLMSPNTRQYFPLRDHKSR 1170
+S+ E+DK A +R +G + F+ ++ + RD ++R
Sbjct: 956 SSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAG--WEEVLRRRDSRAR 1001
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 684 (245.8 bits), Expect = 2.9e-117, Sum P(3) = 2.9e-117
Identities = 152/383 (39%), Positives = 245/383 (63%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINK 576
+ S + + +L K ++ ++ + ++L LIE LL I +D + GA+L+FLPG +I
Sbjct: 798 SFSSGVNKTVL-KTMSVMDLDKVNLELIEALLEWI-VDGKHSYPPGAVLIFLPGLAEIKM 855
Query: 577 TRDRLLANPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITI 634
++L +N F R + + V+ PLHS + S +Q+ VF RPP G KII+STNIAET++TI
Sbjct: 856 LYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTI 915
Query: 635 DDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA 694
DDVVYVIDSG+MKEK YDP + +L+ ++VS+A+A QR GRAGR +G+C+HL+S
Sbjct: 916 DDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHY 975
Query: 695 A-SLPDFQVPEIKRIPIEELCLQVKLLDPNC--NIEDFLQKTLDPPVSVTIRNAIIVLQD 751
L Q+PEI+R+P+E+LCL++K+L+ ++ L + ++PP + ++R + + LQD
Sbjct: 976 NHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQD 1035
Query: 752 IGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPIS 811
+GAL+ DEK+T LG L L V + K++ F + CLDPALT+A + ++ PF +S
Sbjct: 1036 LGALTADEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPF---VS 1092
Query: 812 PNEKKR-ATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF--CSQYFVSSGVM 868
P +K+ A K + A G SD LA++ A++ W+ + + G +A + C + F+S V+
Sbjct: 1093 PWDKREEANKKKLDFAV---GNSDYLALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVL 1149
Query: 869 NMLLGMRKQLQTELIKN-GFIPE 890
+ +++Q TEL+ + GF+ E
Sbjct: 1150 QEIASLKRQF-TELLSDIGFVKE 1171
Score = 524 (189.5 bits), Expect = 2.9e-117, Sum P(3) = 2.9e-117
Identities = 114/278 (41%), Positives = 176/278 (63%)
Query: 124 DDGEPGEKLDANQSRKSDKTR-GKRVDIFCKPKMSK-AEIAMKVESLTSRIEKDAN-LRQ 180
++ EP + + N+S + K + ++ D+ K ++ +I M+ R++K + +
Sbjct: 475 EEDEPQQVIVENESYVNLKKKLSRKYDVHSKSTYNENVKICMQF-----RLKKSSRRFQS 529
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKI 238
++ ER KLP ++ I + S+QV+++SG TGCGKTTQ+PQF+L+ S I
Sbjct: 530 MLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVANI 589
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 590 ICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 647
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G L+ +TH+IVDE+HER SDF+L +++D++ P LR+ILMSAT
Sbjct: 648 GDLTLQ------------GITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSAT 695
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L+A+ FSQYF CP+I +PG T+PV F+LEDV+++ +
Sbjct: 696 LNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVIAMTR 733
Score = 82 (33.9 bits), Expect = 2.9e-117, Sum P(3) = 2.9e-117
Identities = 32/116 (27%), Positives = 56/116 (48%)
Query: 890 EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH------KNGR----------RFVET 933
E+ +S + N + +I A+L A LYP V +++ P G +FV T
Sbjct: 1195 EEANSNAENFK---LISAMLCAALYPNVVQVKKPEGKYQKTSTGAVKMQPKAEELKFV-T 1250
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
V +HP S+N++ + + P +VY E + + +R+C++V PL+LL
Sbjct: 1251 KNDGYVHIHPSSVNYQT---RHFESPYLVYHEKIK-TSRVFIRDCSMVSVYPLVLL 1302
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 664 (238.8 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 169/497 (34%), Positives = 269/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1085
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1086 VFVRDSSQVHPLAVLLL 1102
Score = 550 (198.7 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 134/358 (37%), Positives = 203/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 298 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 354
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ +HYP D P +L ++ K G D I KP M +E A +V
Sbjct: 355 LRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRL 413
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
S +E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 414 SQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLE 473
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
++G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 474 RYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALL 533
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 534 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 579
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 580 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
Score = 42 (19.8 bits), Expect = 5.5e-61, Sum P(2) = 5.5e-61
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 293 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 344
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 664 (238.8 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 169/497 (34%), Positives = 269/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1085
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1086 VFVRDSSQVHPLAVLLL 1102
Score = 550 (198.7 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 134/358 (37%), Positives = 203/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 298 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 354
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ +HYP D P +L ++ K G D I KP M +E A +V
Sbjct: 355 LRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRL 413
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
S +E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 414 SQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLE 473
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
++G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 474 RYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALL 533
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 534 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 579
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 580 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
Score = 42 (19.8 bits), Expect = 5.5e-61, Sum P(2) = 5.5e-61
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 293 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 344
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 664 (238.8 bits), Expect = 1.7e-114, Sum P(2) = 1.7e-114
Identities = 169/497 (34%), Positives = 269/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 641 VKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 700
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 701 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAET 759
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 760 SITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 819
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 820 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 879
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 880 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 934
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 935 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAP 993
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 994 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQ 1052
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1053 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1108
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1109 VFVRDSSQVHPLAVLLL 1125
Score = 550 (198.7 bits), Expect = 1.7e-114, Sum P(2) = 1.7e-114
Identities = 134/358 (37%), Positives = 203/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 321 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 377
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ +HYP D P +L ++ K G D I KP M +E A +V
Sbjct: 378 LRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRL 436
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
S +E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 437 SQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLE 496
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
++G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 497 RYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALL 556
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 557 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 602
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 603 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 660
Score = 42 (19.8 bits), Expect = 6.4e-61, Sum P(2) = 6.4e-61
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 316 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 367
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 664 (238.8 bits), Expect = 1.7e-114, Sum P(2) = 1.7e-114
Identities = 169/497 (34%), Positives = 269/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 646 VKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 705
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 706 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAET 764
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 765 SITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 824
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 825 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 884
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 885 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 939
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 940 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAP 998
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 999 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQ 1057
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1058 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1113
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1114 VFVRDSSQVHPLAVLLL 1130
Score = 550 (198.7 bits), Expect = 1.7e-114, Sum P(2) = 1.7e-114
Identities = 134/358 (37%), Positives = 203/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 326 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 382
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ +HYP D P +L ++ K G D I KP M +E A +V
Sbjct: 383 LRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRL 441
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
S +E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 442 SQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLE 501
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
++G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 502 RYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALL 561
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 562 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 607
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 608 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 665
Score = 42 (19.8 bits), Expect = 6.6e-61, Sum P(2) = 6.6e-61
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 321 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 372
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 667 (239.9 bits), Expect = 2.9e-114, Sum P(2) = 2.9e-114
Identities = 169/497 (34%), Positives = 269/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1085
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1086 VFVRDSSQVHPLAVLLL 1102
Score = 542 (195.9 bits), Expect = 2.9e-114, Sum P(2) = 2.9e-114
Identities = 131/358 (36%), Positives = 202/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 298 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 354
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ HYP D P +L ++ K G D I KP + +E A +V
Sbjct: 355 LRKIETFLNHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYVPLSE-AEEVRL 413
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
+ +E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 414 SQNLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE 473
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
S+G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 474 RYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALL 533
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 534 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 579
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 580 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
Score = 42 (19.8 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 293 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 344
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 675 (242.7 bits), Expect = 3.2e-114, Sum P(2) = 3.2e-114
Identities = 171/497 (34%), Positives = 270/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 590 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 649
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 650 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 708
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 709 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 768
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 769 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 828
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 829 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 883
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 884 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 942
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 943 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1001
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1002 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1057
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1058 VFVRDSSQVHPLAVLLL 1074
Score = 534 (193.0 bits), Expect = 3.2e-114, Sum P(2) = 3.2e-114
Identities = 130/358 (36%), Positives = 201/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 270 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 326
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ HYP + P +L ++ K G D I KP + E A +V
Sbjct: 327 LRKIETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRL 385
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
S +E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 386 SQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE 445
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
++G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 446 RYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALL 505
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 506 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 551
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 552 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 609
Score = 42 (19.8 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 265 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 316
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 675 (242.7 bits), Expect = 4.0e-114, Sum P(2) = 4.0e-114
Identities = 171/497 (34%), Positives = 270/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1085
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1086 VFVRDSSQVHPLAVLLL 1102
Score = 534 (193.0 bits), Expect = 4.0e-114, Sum P(2) = 4.0e-114
Identities = 130/358 (36%), Positives = 201/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 298 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 354
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ HYP + P +L ++ K G D I KP + E A +V
Sbjct: 355 LRKIETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRL 413
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
S +E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 414 SQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE 473
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
++G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 474 RYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALL 533
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 534 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 579
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 580 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
Score = 42 (19.8 bits), Expect = 3.1e-62, Sum P(2) = 3.1e-62
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 293 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 344
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 668 (240.2 bits), Expect = 5.2e-114, Sum P(4) = 5.2e-114
Identities = 160/427 (37%), Positives = 257/427 (60%)
Query: 493 KDGRTALQLGEQENQPEVAQIIKKHMENALS--DSMKQQLLDKYLATVNPELIDLVLIEQ 550
+D R +L L +Q++ + + + L+ + + ++ K ++ ++ E ++L LIE
Sbjct: 768 EDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYQGVSKSVI-KTMSVMDFEKVNLELIEA 826
Query: 551 LLR-----KICMDSEDGAILVFLPGWEDINKTRDRLLANPFF--RDTSKFVIIPLHSMVP 603
LL K + GAILVFLPG +I ++L +N F R +++ VI PLHS +
Sbjct: 827 LLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLS 886
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK YD + +L+ +
Sbjct: 887 SEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDT 946
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLD- 721
+VS+A+A QR GRAGR +G+C+HL++ L Q+PEI+R+P+E+LCL++K+L+
Sbjct: 947 FVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEM 1006
Query: 722 -PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
N++ + ++PP + ++R + I L+D+GAL+ DE +T LG L L V + K+
Sbjct: 1007 FSTHNLQSVFARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKL 1066
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR-ATAAKFELASLYGGQSDQLAVI 839
+ F + CLDPALT+A + ++ PF +SP +KK A K E A SD LA++
Sbjct: 1067 MLFGSIFRCLDPALTIAASLAFKSPF---VSPWDKKEEANQKKLEFAF---ANSDYLALL 1120
Query: 840 AAFECWKNAKQRGQEAWF--CSQYFVSSGVMNMLLGMRKQLQTELIKN-GFIPEDVSSCS 896
A++ W+ + + G A + C Q F+S V+ + +++Q TEL+ + GF+ E + +
Sbjct: 1121 RAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDIGFVKEGLRARE 1179
Query: 897 HNARVPG 903
R G
Sbjct: 1180 IEKRAQG 1186
Score = 500 (181.1 bits), Expect = 5.2e-114, Sum P(4) = 5.2e-114
Identities = 120/305 (39%), Positives = 185/305 (60%)
Query: 98 KEILPSLTF-SEGSKLVLQDLFTHYPPDDGE-PGEKLDANQSRKSDKTR-GKRVDIFCKP 154
K ++PS +F S V ++ D+ E P + N+S + K + KR D +
Sbjct: 447 KPVIPSNSFFSNQIPEVEKESEPEEETDEDEGPAPVMVENESYVNLKKKISKRYD--WQA 504
Query: 155 KMSKAEIAMKVESLTSRIEKDAN-LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
K AE +K+ RI++ + + +++ER LP ++ I + +QV+++SG T
Sbjct: 505 KSVHAE-NVKI-CKQFRIKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMT 562
Query: 214 GCGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
GCGKTTQ+PQF+L+ + + I+CTQPRRISA SVAER++ ER E +G +GY+I
Sbjct: 563 GCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQI 622
Query: 272 RLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
RLES + +++CT GVLLR L +G + L+ +THIIVDE+HER
Sbjct: 623 RLESVKSSATRLLYCTTGVLLRRL--EGDTALQ------------GVTHIIVDEVHERTE 668
Query: 332 YSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
SDF+L +++D++ P L++ILMSATL+A+ FS+YF CPVI +PG T+PV F+LED
Sbjct: 669 ESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDA 728
Query: 392 LSILK 396
+++ +
Sbjct: 729 IAVTR 733
Score = 96 (38.9 bits), Expect = 5.2e-114, Sum P(4) = 5.2e-114
Identities = 33/120 (27%), Positives = 56/120 (46%)
Query: 885 NGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH------KNGR---------- 928
+G + + NA P +I A+L A LYP V +++ P G
Sbjct: 1189 DGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSDEL 1248
Query: 929 RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
+FV T V +HP S+N+++ + D P +VY E + + +R+C++V PL+L
Sbjct: 1249 KFV-TKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEKIK-TSRVFIRDCSMVSVYPLVL 1303
Score = 41 (19.5 bits), Expect = 5.2e-114, Sum P(4) = 5.2e-114
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 1038 NVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHP 1085
NV + V + D W+ F + + +A++ LR L + K+ +P
Sbjct: 1310 NVQLQKGEFVVSLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNP 1358
Score = 40 (19.1 bits), Expect = 6.6e-66, Sum P(4) = 6.6e-66
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 101 LPSLTFSEGSKLVLQDLF--THYPPDDGEPGEKLDANQSRKSDKTRGKR 147
+P TF + L+D T Y DG P + S++ K R R
Sbjct: 713 IPGRTFPV-DQFFLEDAIAVTRYVLQDGSPYARSMKQMSKEKLKARRSR 760
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 667 (239.9 bits), Expect = 5.5e-114, Sum P(2) = 5.5e-114
Identities = 169/497 (34%), Positives = 269/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 646 VKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 705
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 706 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 764
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 765 SITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 824
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 825 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 884
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 885 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 939
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 940 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 998
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 999 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1057
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1058 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1113
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1114 VFVRDSSQVHPLAVLLL 1130
Score = 542 (195.9 bits), Expect = 5.5e-114, Sum P(2) = 5.5e-114
Identities = 131/358 (36%), Positives = 202/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 326 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 382
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ HYP D P +L ++ K G D I KP + +E A +V
Sbjct: 383 LRKIETFLNHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYVPLSE-AEEVRL 441
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
+ +E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 442 SQNLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE 501
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
S+G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 502 RYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALL 561
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 562 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 607
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 608 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 665
Score = 42 (19.8 bits), Expect = 3.0e-61, Sum P(2) = 3.0e-61
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 321 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 372
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 671 (241.3 bits), Expect = 1.1e-113, Sum P(2) = 1.1e-113
Identities = 170/497 (34%), Positives = 269/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ TI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 STTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1085
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1086 VFVRDSSQVHPLAVLLL 1102
Score = 534 (193.0 bits), Expect = 1.1e-113, Sum P(2) = 1.1e-113
Identities = 130/358 (36%), Positives = 201/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 298 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 354
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ HYP + P +L ++ K G D I KP + E A +V
Sbjct: 355 LRKIETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRL 413
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
S +E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 414 SQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE 473
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
++G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 474 RYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALL 533
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 534 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 579
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 580 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
Score = 42 (19.8 bits), Expect = 8.8e-62, Sum P(2) = 8.8e-62
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 293 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 344
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 662 (238.1 bits), Expect = 2.0e-113, Sum P(2) = 2.0e-113
Identities = 163/465 (35%), Positives = 254/465 (54%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 681 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 739
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 740 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 799
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 800 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 859
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 860 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 919
Query: 783 FAILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L + +C + RDPF S + + RA K + + SD LA + A
Sbjct: 920 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 973
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 974 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1032
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR---RFV--ETAGGAKVRLHPH 944
C+ + ++ VLMAGLYP + ++R + G+ V T G + LH
Sbjct: 1033 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSG-NILLHKS 1091
Query: 945 SLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
++N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1092 TINREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1133
Score = 542 (195.9 bits), Expect = 2.0e-113, Sum P(2) = 2.0e-113
Identities = 131/358 (36%), Positives = 202/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 326 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 382
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ HYP D P +L ++ K G D I KP + +E A +V
Sbjct: 383 LRKIETFLNHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYVPLSE-AEEVRL 441
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
+ +E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 442 SQNLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE 501
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
S+G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 502 RYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALL 561
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 562 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 607
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 608 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 665
Score = 42 (19.8 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 321 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 372
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 669 (240.6 bits), Expect = 3.0e-113, Sum P(2) = 3.0e-113
Identities = 170/497 (34%), Positives = 269/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 646 VKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 705
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 706 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 764
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 765 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 824
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 825 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 884
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 885 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 939
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 940 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAP 998
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 999 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1057
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1058 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1113
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1114 VFVRDSSQVHPLAVLLL 1130
Score = 533 (192.7 bits), Expect = 3.0e-113, Sum P(2) = 3.0e-113
Identities = 128/358 (35%), Positives = 202/358 (56%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 326 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 382
Query: 111 KLVLQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ HYP D+ P +L + K G D I KP + +E A ++
Sbjct: 383 LRKIETFLNHYPVDNSWISPELRLQGDDILPLGKDSGPLSDPITGKPYVPLSE-AEELRL 441
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
+ +E + +E +LP+ +D I + ++ + VV+I+G+TGCGKTT++PQ LLE
Sbjct: 442 SQNLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLE 501
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
++G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 502 RYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALL 561
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 562 FCTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQ 607
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 608 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 665
Score = 42 (19.8 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 321 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 372
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 669 (240.6 bits), Expect = 5.4e-112, Sum P(2) = 5.4e-112
Identities = 170/497 (34%), Positives = 269/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 644 VKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 703
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 704 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAET 762
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 763 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 822
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 823 RSRLEKMAPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 882
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 883 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 937
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 938 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAP 996
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 997 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1055
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1056 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1111
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1112 VFVRDSSQVHPLAVLLL 1128
Score = 521 (188.5 bits), Expect = 5.4e-112, Sum P(2) = 5.4e-112
Identities = 126/358 (35%), Positives = 199/358 (55%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ + K +G+ +++ ++ ++ ET + ++ E
Sbjct: 324 AEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 380
Query: 111 KLVLQDLFTHYPPDDGEPGE--KLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ HYP + +L K G D I KP + +E A ++
Sbjct: 381 LRKIETFLNHYPVESSWISSELRLQGEDILPLGKDSGPLSDPITGKPYVPLSE-AEELRL 439
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
S +E + +E +LP+ +D I + ++ + VV+I+G+TGCGKTT++PQ LLE
Sbjct: 440 SQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLE 499
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
++G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++
Sbjct: 500 RYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALL 559
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H++VDE+HERD +DF+L +++ +
Sbjct: 560 FCTVGILLRKLQSN-----------PSLEGVS---HVVVDEVHERDVNTDFLLILLKGLQ 605
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 606 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 663
Score = 42 (19.8 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + CK S + E LT + A+LR++ E + +
Sbjct: 319 KGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 370
Score = 42 (19.8 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL-VSQ 298
C++P R + AE E GE G + L + + +++ N V+ R L +S
Sbjct: 39 CSRPDRTQEAAEAEAAPGEPGEGDGSVVNASRDLLKEFPQPKNLL---NSVIGRALGISH 95
Query: 299 GVSRLKEA-SNKPAKDDVS 316
+L +N P K V+
Sbjct: 96 AKDKLVYVHTNGPKKKKVT 114
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 669 (240.6 bits), Expect = 3.8e-111, Sum P(2) = 3.8e-111
Identities = 170/497 (34%), Positives = 269/497 (54%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 644 VKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 703
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 704 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAET 762
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 763 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 822
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 823 RSRLEKMAPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 882
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L + +C + RDPF
Sbjct: 883 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 937
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 938 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAP 996
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 997 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1055
Query: 920 LRPPH--KNGR---RFV--ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
+R + G+ V T G + LH ++N + + ++ + Y + +G
Sbjct: 1056 VRQGKVTRQGKFKPNSVTYRTKSG-NILLHKSTINREATRLRSR---WLTYFMAVKSNGS 1111
Query: 973 MHVRNCTVVGPLPLLLL 989
+ VR+ + V PL +LLL
Sbjct: 1112 VFVRDSSQVHPLAVLLL 1128
Score = 513 (185.6 bits), Expect = 3.8e-111, Sum P(2) = 3.8e-111
Identities = 126/358 (35%), Positives = 196/358 (54%)
Query: 51 ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGS 110
A N+ A+ K +G+ +++ ++ ++ ET + ++ E
Sbjct: 324 AEAENKAAALACNKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRP---CTIQVPEPI 380
Query: 111 KLVLQDLFTHYPPDDGEPGE--KLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVES 167
++ HYP + +L K G D I KP + +E A ++
Sbjct: 381 LRKIETFLNHYPVESSWISSELRLQGEDILPLGKDSGPLSDPITGKPYVPLSE-AEELRL 439
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
S +E + +E +LP+ +D I + ++ + VV+I+G+TGCGKTT++PQ LLE
Sbjct: 440 SQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLE 499
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIV 284
++G C ++ TQPRRISA SVA+R+S E G + N+G+++RLESK + +++
Sbjct: 500 RYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALL 559
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S P+ + VS H++VDE HERD +DF+L +++ +
Sbjct: 560 FCTVGILLRKLQSN-----------PSLEGVS---HVVVDEEHERDVNTDFLLILLKGLQ 605
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 606 RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 663
Score = 42 (19.8 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL-VSQ 298
C++P R + AE E GE G + L + + +++ N V+ R L +S
Sbjct: 39 CSRPDRTQEAAEAEAAPGEPGEGDGSVVNASRDLLKEFPQPKNLL---NSVIGRALGISH 95
Query: 299 GVSRLKEA-SNKPAKDDVS 316
+L +N P K V+
Sbjct: 96 AKDKLVYVHTNGPKKKKVT 114
Score = 37 (18.1 bits), Expect = 6.0e-61, Sum P(2) = 6.0e-61
Identities = 11/52 (21%), Positives = 22/52 (42%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ R+ + K + C S + E LT + A+LR++ E + +
Sbjct: 319 KGRRKAEAENKAAALACNKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR 370
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 670 (240.9 bits), Expect = 1.4e-110, Sum P(2) = 1.4e-110
Identities = 161/426 (37%), Positives = 258/426 (60%)
Query: 493 KDGRTALQLGEQENQPEVAQIIKKHMENALS--DSMKQQLLDKYLATVNPELIDLVLIEQ 550
+D R +L L Q++ + + + L+ + + ++ K ++ ++ E ++L LIE
Sbjct: 771 EDLRLSLHLQHQDSVKDAVPDQQLDFKQLLARYKGVSKSVI-KTMSIMDFEKVNLELIEA 829
Query: 551 LLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF--RDTSKFVIIPLHSMVPS 604
LL I +D + GAILVFLPG +I ++L +N F R + + V+ PLHS + S
Sbjct: 830 LLEWI-VDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSS 888
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK YD + +L+ ++
Sbjct: 889 EEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTF 948
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLD-- 721
VS+A+A QR GRAGR +G+C+HL++ L Q+PEI+R+P+E+LCL++K+L+
Sbjct: 949 VSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMF 1008
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L L V + K++
Sbjct: 1009 STHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLM 1068
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR-ATAAKFELASLYGGQSDQLAVIA 840
F + CLDPALT+A + ++ PF +SP +KK A K E A SD LA++
Sbjct: 1069 LFGSIFRCLDPALTIAASLAFKSPF---VSPWDKKEEANQKKLEFAF---ANSDYLALLR 1122
Query: 841 AFECWKNAKQRGQEAWF--CSQYFVSSGVMNMLLGMRKQLQTELIKN-GFIPEDVSSCSH 897
A++ W+ + + G A + C Q F+S V+ + +++Q TEL+ + GF+ E + +
Sbjct: 1123 AYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDIGFVKEGLRAREI 1181
Query: 898 NARVPG 903
R G
Sbjct: 1182 EKRAQG 1187
Score = 510 (184.6 bits), Expect = 1.4e-110, Sum P(2) = 1.4e-110
Identities = 119/304 (39%), Positives = 182/304 (59%)
Query: 98 KEILP--SLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTR-GKRVDIFCKP 154
K ++P S T S+ +++ + +D P + N+S + K + KR D +
Sbjct: 450 KPVIPNNSFTSSQIAEVEKESEPEEETDEDEGPAPVIVENESYVNLKKKISKRYD--WQA 507
Query: 155 KMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETG 214
K AE A + + + + I++ER LP ++ I + +QV++ISG TG
Sbjct: 508 KSVYAENAKICKQFRIK-QASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTG 566
Query: 215 CGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
CGKTTQ+PQF+L+ S + I+CTQPRRISA SVAER++ ER E +G +GY+IR
Sbjct: 567 CGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAISVAERVAKERTERVGLTVGYQIR 626
Query: 273 LESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
LES + +++CT GVLLR L +G + L+ +THIIVDE+HER
Sbjct: 627 LESVKSSATRLLYCTTGVLLRRL--EGDTSLQ------------GVTHIIVDEVHERTEE 672
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SDF+L +++D++ P+L++ILMSATL+A+ FS+YF CPVI +PG T+PV F+LED +
Sbjct: 673 SDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYFSSCPVITIPGRTFPVDQFFLEDAI 732
Query: 393 SILK 396
++ +
Sbjct: 733 AVTR 736
Score = 97 (39.2 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 63/241 (26%), Positives = 106/241 (43%)
Query: 780 MLF---FAILMDCLDPALTLACASDYRDPFTLPISPNEKKR--ATAAKFELASLYGGQSD 834
MLF F L L A +LA S + P+ N+KK A A LA L +
Sbjct: 1068 MLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGW 1127
Query: 835 QLAVI----AAFE-CWKN--AKQRGQEAWFCSQYFVS--SGVMNMLLGMR-KQLQTELIK 884
QL++ A++ C +N + + QE + F S + + G+R ++++
Sbjct: 1128 QLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFVKEGLRAREIEKRAQG 1187
Query: 885 -NGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH------KNGR--------- 928
+G + + NA P +I A+L A LYP V +++ P G
Sbjct: 1188 GDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSDE 1247
Query: 929 -RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
+FV T V +HP S+N+++ + D P +VY E + + +R+C++V PL+
Sbjct: 1248 LKFV-TKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEKIK-TSRVFIRDCSMVSVYPLV 1302
Query: 988 L 988
L
Sbjct: 1303 L 1303
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 665 (239.2 bits), Expect = 2.2e-109, Sum P(2) = 2.2e-109
Identities = 162/426 (38%), Positives = 259/426 (60%)
Query: 493 KDGRTALQLGEQENQPEVAQIIKKHMENALS--DSMKQQLLDKYLATVNPELIDLVLIEQ 550
+D R +L L +Q++ + + + L+ + + ++ K ++ ++ E ++L LIE
Sbjct: 775 EDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVI-KTMSIMDFEKVNLELIEA 833
Query: 551 LLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF--RDTSKFVIIPLHSMVPS 604
LL I +D + GAILVFLPG +I ++L +N F R +++ VI PLHS + S
Sbjct: 834 LLEWI-VDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSS 892
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK YD + +L+ ++
Sbjct: 893 EEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTF 952
Query: 665 VSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 723
VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+E+LCL++K+L+
Sbjct: 953 VSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMF 1012
Query: 724 C--NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L L V + K++
Sbjct: 1013 SAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLM 1072
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR-ATAAKFELASLYGGQSDQLAVIA 840
F + CLDPALT+A + ++ PF +SP +KK A K E A SD LA++
Sbjct: 1073 LFGSIFRCLDPALTIAASLAFKSPF---VSPWDKKEEANQKKLEFAF---ANSDYLALLQ 1126
Query: 841 AFECWKNAKQRGQEAWF--CSQYFVSSGVMNMLLGMRKQLQTELIKN-GFIPEDVSSCSH 897
A++ W+ + + G A + C Q F+S V+ + +++Q TEL+ + GF E + +
Sbjct: 1127 AYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDIGFAREGLRAREI 1185
Query: 898 NARVPG 903
R G
Sbjct: 1186 EKRAQG 1191
Score = 504 (182.5 bits), Expect = 2.2e-109, Sum P(2) = 2.2e-109
Identities = 115/276 (41%), Positives = 168/276 (60%)
Query: 124 DDGEPGEKLDANQSRKSDKTR-GKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIV 182
DDG P + N+S + K + KR D + K AE + + + + I+
Sbjct: 483 DDG-PAPVIVENESYVNLKKKISKRYD--WQAKSVHAENGKICKQFRMK-QASRQFQSIL 538
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
+ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + + I+C
Sbjct: 539 QERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIIC 598
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +G
Sbjct: 599 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--EGD 656
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
+ L+ S HIIVDE+HER SDF+L +++D++ P L++ILMSATL+
Sbjct: 657 TALQGVS------------HIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLN 704
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 705 AELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 740
Score = 96 (38.9 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 63/241 (26%), Positives = 106/241 (43%)
Query: 780 MLF---FAILMDCLDPALTLACASDYRDPFTLPISPNEKKR--ATAAKFELASLYGGQSD 834
MLF F L L A +LA S + P+ N+KK A A LA L +
Sbjct: 1072 MLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGW 1131
Query: 835 QLA----VIAAFE-CWKN--AKQRGQEAWFCSQYFVS--SGVMNMLLGMR-KQLQTELIK 884
QL+ V A++ C +N + + QE + F S + G+R ++++
Sbjct: 1132 QLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQG 1191
Query: 885 -NGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH---------------KNGR 928
+G + + NA P +I A+L A LYP V +++ P K+
Sbjct: 1192 GDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAE 1251
Query: 929 -RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
+FV T V +HP S+N+++ + D P ++Y E + + +R+C++V PL+
Sbjct: 1252 LKFV-TKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKIK-TSRVFIRDCSMVSVYPLV 1306
Query: 988 L 988
L
Sbjct: 1307 L 1307
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 697 (250.4 bits), Expect = 6.7e-109, Sum P(4) = 6.7e-109
Identities = 164/383 (42%), Positives = 230/383 (60%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N+ SD +Q L K L N + ID L+E+L+ I E+GAIL+FLPG +I D
Sbjct: 879 NSYSDQTQQNL--KRL---NEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLD 933
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L A+ FR + ++PLHS + S +Q+KVF RPP G RK+I +TNIAET+ITIDDVVY
Sbjct: 934 MLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVY 993
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLP- 698
VIDSG+ KE Y+P +S++ W+S+A+A+QR GRAGR + GIC+ LY++ R L
Sbjct: 994 VIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMR 1053
Query: 699 DFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
+QVPE+ R+P+ ELCLQ+KLL +I+ FL + L+PP + +AI +L ++GA+ D
Sbjct: 1054 PYQVPEMLRMPLVELCLQIKLLGLG-HIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGD 1112
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
E++T LG L L V L+ KML + + CL P L++A Y+ PF P +EK+
Sbjct: 1113 EELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYP--KDEKQNV 1170
Query: 819 TAAKFELASLYG----------GQSDQLAVIAAFECW-KNAKQRGQEAW--FCSQYFVSS 865
K L S G QSD L ++ A++ W K ++RG +A FC F+SS
Sbjct: 1171 DRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSS 1230
Query: 866 GVMNMLLGMRKQLQTELIKNGFI 888
VM M+ MR Q T L G I
Sbjct: 1231 SVMRMIRDMRVQFGTLLADIGLI 1253
Score = 430 (156.4 bits), Expect = 6.7e-109, Sum P(4) = 6.7e-109
Identities = 96/225 (42%), Positives = 142/225 (63%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET--C 236
+ +++ R+ LPIS K+ I + V+++ GETG GKTTQVPQF+L+ + G C
Sbjct: 605 KDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYC 664
Query: 237 KIVCTQPRRISATSVAERISVERGEN---IGDN-IGYKIRLESKGGKHSSIVFCTNGVLL 292
I+CTQPRRI+A SVA+R++ ER E+ + D+ +GY++RLES + ++FCT G+LL
Sbjct: 665 NIICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILL 724
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP---- 348
R L A ++ D +THIIVDE+HER DF+L I++ ++
Sbjct: 725 RKL----------AGDRTLND----VTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNT 770
Query: 349 --HLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
L++ILMSAT+DAD FS+YFG CPVI G T+PV + +LE++
Sbjct: 771 SRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEI 815
Score = 80 (33.2 bits), Expect = 6.7e-109, Sum P(4) = 6.7e-109
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 902 PGIIHAVLMAGLYPMVAR---------LRPPHKNGRRFVETA----GGAKVRLHPHSLNF 948
P ++ A+L AGLYP +A K G + + G +V +HP S+N
Sbjct: 1287 PEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSYSAWYDGRREVHIHPSSINS 1346
Query: 949 KLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+FK + P +V+ E + +++R+ T+V P +LL I V
Sbjct: 1347 --NFKAFQN-PFLVFLEKVETNK-VYLRDTTIVSPFSILLFGGSINV 1389
Score = 53 (23.7 bits), Expect = 2.3e-69, Sum P(5) = 2.3e-69
Identities = 24/89 (26%), Positives = 36/89 (40%)
Query: 226 LEHIWSKGETCKIVCTQPRRISATS--VAERISVERGENIGDNIGYKIRLESKGGKHSSI 283
L+ IW KGE KI ++ S A + + E GE G N Y + + K
Sbjct: 398 LDGIWKKGEAQKIPKAFLHQLCQRSGWEAPKFNKETGE--GRNFSYTVSILRKASGRGKN 455
Query: 284 VFCTNGVLLRLLVS-QGVSRLKEASNKPA 311
V L+L + +++A NK A
Sbjct: 456 RQAGGLVTLQLPPKDENFESIEDAQNKVA 484
Score = 49 (22.3 bits), Expect = 2.3e-69, Sum P(5) = 2.3e-69
Identities = 18/76 (23%), Positives = 36/76 (47%)
Query: 133 DANQSR-KSDKTRGKRVDIFC-KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPI 190
DA +++ K DK ++ + K K +++ + L S +++ E+ S PI
Sbjct: 238 DAIKAKEKRDKRGQEQAGLAIRKLKQEISDLGLSEAMLESEFQREHAFESATEQESTCPI 297
Query: 191 SSFKDVITSTVDSNQV 206
S D + +VD++ V
Sbjct: 298 S---DNLHESVDADDV 310
Score = 48 (22.0 bits), Expect = 6.7e-109, Sum P(4) = 6.7e-109
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 87 KSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRK-----SD 141
++K + G++ + S SE +L F PP + P E L+ + K S+
Sbjct: 334 QTKALPSSSSGQDFVASDEDSEDVELG-DTFFEEIPPSEISPHELLELQKEEKMRELRSE 392
Query: 142 KTRGKRVDIFCKPKMSK 158
K GK I+ K + K
Sbjct: 393 KNLGKLDGIWKKGEAQK 409
Score = 44 (20.5 bits), Expect = 1.8e-108, Sum P(4) = 1.8e-108
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 58 RAVVHEVCKKMGMTSKSSGR--GKQRRVSVCKSKKRVETDKGK 98
+A +H++C++ G + + G+ R S S R + +GK
Sbjct: 412 KAFLHQLCQRSGWEAPKFNKETGEGRNFSYTVSILRKASGRGK 454
Score = 44 (20.5 bits), Expect = 1.8e-108, Sum P(4) = 1.8e-108
Identities = 16/74 (21%), Positives = 31/74 (41%)
Query: 49 FDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSE 108
++A N+E + + K+SGRGK R+ + + D+ E + ++
Sbjct: 424 WEAPKFNKETGEGRNFSYTVSILRKASGRGKNRQAGGLVTLQLPPKDENFESIEDAQ-NK 482
Query: 109 GSKLVLQDLFTHYP 122
+ L LF+ P
Sbjct: 483 VAAFALHKLFSDLP 496
Score = 37 (18.1 bits), Expect = 2.3e-69, Sum P(5) = 2.3e-69
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 382 PVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDML 441
PV E S++ + L ++ ED +K +++ SL S+ F+
Sbjct: 496 PVHFAITEPYASLVLIWKQEELLCTTIQSTEEDRRANFVDKLLEEDSFSLTTSSSSFENS 555
Query: 442 LELV 445
L LV
Sbjct: 556 LPLV 559
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 655 (235.6 bits), Expect = 1.1e-108, Sum P(2) = 1.1e-108
Identities = 152/384 (39%), Positives = 239/384 (62%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF- 587
K ++ ++ E ++L LIE LL I +D + GA+LVFLPG +I ++L +N F
Sbjct: 818 KTMSVMDFEKVNLELIEALLEWI-VDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFN 876
Query: 588 -RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+M
Sbjct: 877 NRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKM 936
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEI 705
KEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI
Sbjct: 937 KEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEI 996
Query: 706 KRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
+R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ DEK+T
Sbjct: 997 QRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTP 1056
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR-ATAAK 822
LG L L V + K++ + CLDPALT+A + ++ PF +SP +KK A K
Sbjct: 1057 LGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPF---VSPWDKKEEANQKK 1113
Query: 823 FELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQT 880
E A SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++Q T
Sbjct: 1114 LEFAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQF-T 1169
Query: 881 ELIKN-GFIPEDVSSCSHNARVPG 903
EL+ + GF+ E + + R G
Sbjct: 1170 ELLSDIGFVKEGLRAKEIEKRAQG 1193
Score = 508 (183.9 bits), Expect = 1.1e-108, Sum P(2) = 1.1e-108
Identities = 123/305 (40%), Positives = 175/305 (57%)
Query: 98 KEILPSLTFSEGSKLV---LQDLFTHYPPDDGEPGEKLDANQSRKSDKTRG-KRVDIFCK 153
K ++PS TF L L +L D+G P + N+S + K R KR D +
Sbjct: 455 KPVVPSNTFLSNQMLEGERLSELEEDADEDEG-PASIIVENESYVNLKKRSYKRYD---R 510
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
P S K+ + I++ER LP ++ I + +QVV+ISG T
Sbjct: 511 PAKSLFAENSKICRQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMT 570
Query: 214 GCGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
GCGKTTQ+PQF+L++ + I+CTQPRRISA SVAER++ ER E +G +GY+I
Sbjct: 571 GCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQI 630
Query: 272 RLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
RLES + +++CT GVLLR L +G + L+ +THIIVDE+HER
Sbjct: 631 RLESVKSSATRLLYCTTGVLLRRL--EGDATLQ------------GVTHIIVDEVHERTE 676
Query: 332 YSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
SDF+L +++D++ L++ILMSATLDA FS+YF CPVI +PG +PV F+LED
Sbjct: 677 ESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDA 736
Query: 392 LSILK 396
L++ +
Sbjct: 737 LAVTR 741
Score = 100 (40.3 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
Identities = 62/235 (26%), Positives = 104/235 (44%)
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKR--ATAAKFELASL--YGGQ--SDQL 836
F L L A +LA S + P+ N+KK A A LA L Y G S +
Sbjct: 1080 FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKE 1139
Query: 837 AVIAAFE-CWKN--AKQRGQEAWFCSQYFVS--SGVMNMLLGMR-KQLQTELIK-NGFIP 889
+ A++ C +N + + QE + F S + + G+R K+++ +G +
Sbjct: 1140 SARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFVKEGLRAKEIEKRAQGGDGVLD 1199
Query: 890 EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH---------------KNGR-RFVET 933
+ NA P +I AVL A LYP V +++ P K+ +FV T
Sbjct: 1200 ATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTSSGVVRLQPKSAELKFV-T 1258
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
V +HP S+N+++ + D P ++Y E + + +R+C++V PL+L
Sbjct: 1259 KNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKIK-TSRVFIRDCSMVSVYPLVL 1309
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 655 (235.6 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 153/384 (39%), Positives = 239/384 (62%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF- 587
K ++ ++ E ++L LIE LL I +D + GAILVFLPG +I ++L +N F
Sbjct: 768 KTMSVMDFEKVNLELIEALLEWI-VDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFN 826
Query: 588 -RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+M
Sbjct: 827 NRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKM 886
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEI 705
KEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI
Sbjct: 887 KEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEI 946
Query: 706 KRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
+R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ DEK+T
Sbjct: 947 QRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTP 1006
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR-ATAAK 822
LG L L V + K++ + CLDPALT+A + ++ PF +SP +KK A K
Sbjct: 1007 LGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPF---VSPWDKKEEANQKK 1063
Query: 823 FELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQT 880
E A SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++Q T
Sbjct: 1064 LEFAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQF-T 1119
Query: 881 ELIKN-GFIPEDVSSCSHNARVPG 903
EL+ + GF+ E + + R G
Sbjct: 1120 ELLSDIGFVKEGLRAKEIEKRAQG 1143
Score = 504 (182.5 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 122/305 (40%), Positives = 175/305 (57%)
Query: 98 KEILPSLTFSEGSKLV---LQDLFTHYPPDDGEPGEKLDANQSRKSDKTRG-KRVDIFCK 153
K ++PS TF L L +L D+G P + N+S + K R +R D +
Sbjct: 405 KPVIPSNTFLSNQMLEGEGLSELEEDADEDEG-PAPIVVENESYVNLKKRSYRRCD---R 460
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
P S K+ + I++ER LP ++ I + +QVV+ISG T
Sbjct: 461 PAKSLFAENSKICRQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMT 520
Query: 214 GCGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
GCGKTTQ+PQF+L++ + I+CTQPRRISA SVAER++ ER E +G +GY+I
Sbjct: 521 GCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQI 580
Query: 272 RLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
RLES + +++CT GVLLR L +G + L+ +THIIVDE+HER
Sbjct: 581 RLESVKSSATRLLYCTTGVLLRRL--EGDATLQ------------GVTHIIVDEVHERTE 626
Query: 332 YSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
SDF+L +++D++ L++ILMSATLDA FS+YF CPVI +PG +PV F+LED
Sbjct: 627 ESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDA 686
Query: 392 LSILK 396
L++ +
Sbjct: 687 LAVTR 691
Score = 100 (40.3 bits), Expect = 2.3e-53, Sum P(3) = 2.3e-53
Identities = 62/235 (26%), Positives = 104/235 (44%)
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKR--ATAAKFELASL--YGGQ--SDQL 836
F L L A +LA S + P+ N+KK A A LA L Y G S +
Sbjct: 1030 FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKE 1089
Query: 837 AVIAAFE-CWKN--AKQRGQEAWFCSQYFVS--SGVMNMLLGMR-KQLQTELIK-NGFIP 889
+ A++ C +N + + QE + F S + + G+R K+++ +G +
Sbjct: 1090 SARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFVKEGLRAKEIEKRAQGGDGVLD 1149
Query: 890 EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH---------------KNGR-RFVET 933
+ NA P +I AVL A LYP V +++ P K+ +FV T
Sbjct: 1150 ATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTSSGVVRLQPKSAELKFV-T 1208
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
V +HP S+N+++ + D P ++Y E + + +R+C++V PL+L
Sbjct: 1209 KNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKIK-TSRVFIRDCSMVSVYPLVL 1259
Score = 90 (36.7 bits), Expect = 2.3e-53, Sum P(3) = 2.3e-53
Identities = 38/138 (27%), Positives = 72/138 (52%)
Query: 489 QLKAKDGRTALQLGEQENQPEV-AQIIKKHMENALSDSMK--QQLLDKY----------L 535
+LKA+ RTAL+ E++ + + Q ++ +++ + D +QLL +Y +
Sbjct: 711 RLKARHNRTALEEVEEDLRLALHLQDEEESVKDTIPDQQLDFKQLLVRYKGVSKSVIKTM 770
Query: 536 ATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+ ++ E ++L LIE LL I +D + GAILVFLPG +I ++L +N F +
Sbjct: 771 SVMDFEKVNLELIEALLEWI-VDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRR 829
Query: 592 KFVIIPLHSMVPSVQQKK 609
+ +H + S+ ++
Sbjct: 830 SHRCV-IHPLHSSLSSEE 846
Score = 38 (18.4 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 414 DPELTEENKSTLDEAISLAWSND 436
DP L EN +T + + +S D
Sbjct: 290 DPHLDAENDTTFLYELQIRFSKD 312
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 655 (235.6 bits), Expect = 3.0e-108, Sum P(2) = 3.0e-108
Identities = 153/384 (39%), Positives = 239/384 (62%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF- 587
K ++ ++ E ++L LIE LL I +D + GAILVFLPG +I ++L +N F
Sbjct: 821 KTMSVMDFEKVNLELIEALLEWI-VDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFN 879
Query: 588 -RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+M
Sbjct: 880 NRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKM 939
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEI 705
KEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI
Sbjct: 940 KEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEI 999
Query: 706 KRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
+R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ DEK+T
Sbjct: 1000 QRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTP 1059
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR-ATAAK 822
LG L L V + K++ + CLDPALT+A + ++ PF +SP +KK A K
Sbjct: 1060 LGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPF---VSPWDKKEEANQKK 1116
Query: 823 FELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQT 880
E A SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++Q T
Sbjct: 1117 LEFAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQF-T 1172
Query: 881 ELIKN-GFIPEDVSSCSHNARVPG 903
EL+ + GF+ E + + R G
Sbjct: 1173 ELLSDIGFVKEGLRAKEIEKRAQG 1196
Score = 504 (182.5 bits), Expect = 3.0e-108, Sum P(2) = 3.0e-108
Identities = 122/305 (40%), Positives = 175/305 (57%)
Query: 98 KEILPSLTFSEGSKLV---LQDLFTHYPPDDGEPGEKLDANQSRKSDKTRG-KRVDIFCK 153
K ++PS TF L L +L D+G P + N+S + K R +R D +
Sbjct: 458 KPVIPSNTFLSNQMLEGEGLSELEEDADEDEG-PAPIVVENESYVNLKKRSYRRCD---R 513
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
P S K+ + I++ER LP ++ I + +QVV+ISG T
Sbjct: 514 PAKSLFAENSKICRQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMT 573
Query: 214 GCGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
GCGKTTQ+PQF+L++ + I+CTQPRRISA SVAER++ ER E +G +GY+I
Sbjct: 574 GCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQI 633
Query: 272 RLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
RLES + +++CT GVLLR L +G + L+ +THIIVDE+HER
Sbjct: 634 RLESVKSSATRLLYCTTGVLLRRL--EGDATLQ------------GVTHIIVDEVHERTE 679
Query: 332 YSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
SDF+L +++D++ L++ILMSATLDA FS+YF CPVI +PG +PV F+LED
Sbjct: 680 ESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDA 739
Query: 392 LSILK 396
L++ +
Sbjct: 740 LAVTR 744
Score = 100 (40.3 bits), Expect = 2.9e-53, Sum P(3) = 2.9e-53
Identities = 62/235 (26%), Positives = 104/235 (44%)
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKR--ATAAKFELASL--YGGQ--SDQL 836
F L L A +LA S + P+ N+KK A A LA L Y G S +
Sbjct: 1083 FRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKE 1142
Query: 837 AVIAAFE-CWKN--AKQRGQEAWFCSQYFVS--SGVMNMLLGMR-KQLQTELIK-NGFIP 889
+ A++ C +N + + QE + F S + + G+R K+++ +G +
Sbjct: 1143 SARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFVKEGLRAKEIEKRAQGGDGVLD 1202
Query: 890 EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH---------------KNGR-RFVET 933
+ NA P +I AVL A LYP V +++ P K+ +FV T
Sbjct: 1203 ATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTSSGVVRLQPKSAELKFV-T 1261
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
V +HP S+N+++ + D P ++Y E + + +R+C++V PL+L
Sbjct: 1262 KNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKIK-TSRVFIRDCSMVSVYPLVL 1312
Score = 90 (36.7 bits), Expect = 2.9e-53, Sum P(3) = 2.9e-53
Identities = 38/138 (27%), Positives = 72/138 (52%)
Query: 489 QLKAKDGRTALQLGEQENQPEV-AQIIKKHMENALSDSMK--QQLLDKY----------L 535
+LKA+ RTAL+ E++ + + Q ++ +++ + D +QLL +Y +
Sbjct: 764 RLKARHNRTALEEVEEDLRLALHLQDEEESVKDTIPDQQLDFKQLLVRYKGVSKSVIKTM 823
Query: 536 ATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+ ++ E ++L LIE LL I +D + GAILVFLPG +I ++L +N F +
Sbjct: 824 SVMDFEKVNLELIEALLEWI-VDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRR 882
Query: 592 KFVIIPLHSMVPSVQQKK 609
+ +H + S+ ++
Sbjct: 883 SHRCV-IHPLHSSLSSEE 899
Score = 38 (18.4 bits), Expect = 4.1e-59, Sum P(2) = 4.1e-59
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 414 DPELTEENKSTLDEAISLAWSND 436
DP L EN +T + + +S D
Sbjct: 343 DPHLDAENDTTFLYELQIRFSKD 365
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 690 (248.0 bits), Expect = 1.2e-107, Sum P(4) = 1.2e-107
Identities = 185/483 (38%), Positives = 266/483 (55%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 840 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 898
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 899 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 958
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 959 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1018
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1019 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1074
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1075 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM-- 1130
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD L + A+ WK A+Q G E +C + F++ + L ++++L +L+K
Sbjct: 1131 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQEL-IKLVKAA 1188
Query: 886 GFIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARL---RPPHKNGRR--FVE 932
GF S+ R ++ AVL+AGLY V ++ + + VE
Sbjct: 1189 GFSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVE 1248
Query: 933 TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
TA G K ++HP S+N L +T ++Y E R +++R T++ P P+LL +
Sbjct: 1249 TAQG-KAQVHPSSVNRDL---QTHGW--LLYQEKIRY-ARVYLRETTLITPFPVLLFGGD 1301
Query: 993 IAV 995
I V
Sbjct: 1302 IEV 1304
Score = 467 (169.5 bits), Expect = 1.2e-107, Sum P(4) = 1.2e-107
Identities = 100/237 (42%), Positives = 155/237 (65%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 549 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 608
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 609 LLEDLLLNEWEASK-CNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 667
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 668 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 713
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 714 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 770
Score = 44 (20.5 bits), Expect = 1.2e-107, Sum P(4) = 1.2e-107
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 1051 VDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHPQKAL 1089
+D W+YF + IA I+ LR + + K+ +P+ +L
Sbjct: 1313 IDGWIYF-QAPVKIAVIFKQLRVLIDSVLRKKLENPKMSL 1351
Score = 40 (19.1 bits), Expect = 1.2e-107, Sum P(4) = 1.2e-107
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 45 EVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSL 104
++Y+F++ + A + + K+ + +K +QR + V K+ DKG I L
Sbjct: 65 KIYSFNSTNDSSGPANLDKSILKVVINNKL----EQRIIGVINEHKKQNNDKGM-ISGRL 119
Query: 105 TFSEGSKLVLQDLF 118
T + LQDL+
Sbjct: 120 TAKK-----LQDLY 128
Score = 40 (19.1 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 484 LGADCQLKAKDGR--TALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATV 538
+ + Q K R TA +P V Q K + N+ +DS LDK + V
Sbjct: 32 IAGEAQSKKPVSRPATAAAAAAGSREPRVKQGPKIYSFNSTNDSSGPANLDKSILKV 88
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 617 (222.3 bits), Expect = 4.4e-107, Sum P(2) = 4.4e-107
Identities = 162/467 (34%), Positives = 245/467 (52%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-S 833
P KM+ + D T+A A+ + +PF NE KR A G + S
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFA---GNRFS 913
Query: 834 DQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 914 DHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PED 972
Query: 892 --VSSCSHNARVPG---IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
++ N ++ ++L G+YP V HK R+ + T G +H S+
Sbjct: 973 CLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEG-RNALIHKSSV 1027
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
N S + P V+ E R + + T+V PL LLL A++
Sbjct: 1028 NCPFSSQDMKYPSPFFVFGEKIR-TRAISAKGMTLVTPLQLLLFASK 1073
Score = 531 (192.0 bits), Expect = 4.4e-107, Sum P(2) = 4.4e-107
Identities = 110/239 (46%), Positives = 159/239 (66%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L EA + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL---------EAG-------IRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
Score = 38 (18.4 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAIL 565
LA PE I + L +L+ ++ D + AIL
Sbjct: 352 LAFATPEQISMDLKNELMYQLEQDHDLQAIL 382
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 617 (222.3 bits), Expect = 4.4e-107, Sum P(2) = 4.4e-107
Identities = 162/467 (34%), Positives = 245/467 (52%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-S 833
P KM+ + D T+A A+ + +PF NE KR A G + S
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFA---GNRFS 913
Query: 834 DQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 914 DHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PED 972
Query: 892 --VSSCSHNARVPG---IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
++ N ++ ++L G+YP V HK R+ + T G +H S+
Sbjct: 973 CLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEG-RNALIHKSSV 1027
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
N S + P V+ E R + + T+V PL LLL A++
Sbjct: 1028 NCPFSSQDMKYPSPFFVFGEKIR-TRAISAKGMTLVTPLQLLLFASK 1073
Score = 531 (192.0 bits), Expect = 4.4e-107, Sum P(2) = 4.4e-107
Identities = 110/239 (46%), Positives = 159/239 (66%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L EA + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL---------EAG-------IRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
Score = 38 (18.4 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAIL 565
LA PE I + L +L+ ++ D + AIL
Sbjct: 352 LAFATPEQISMDLKNELMYQLEQDHDLQAIL 382
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 640 (230.4 bits), Expect = 5.3e-107, Sum P(2) = 5.3e-107
Identities = 173/514 (33%), Positives = 276/514 (53%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQ 550
K +D R E+ + E +I+ ++ + +S ++LDK + D+ I
Sbjct: 355 KFRDRRPKRDPPERRMKHEA--MIEPYLRR-IRNSYDSRVLDKLRLPESEGCEDIDFIAD 411
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTR---DRLLANPFFRDTSKFVIIPLHSMVPSVQQ 607
L+ IC + +GAILVFLPG++ I++ D+ + R + PLHS++ S +Q
Sbjct: 412 LVYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQ 471
Query: 608 KKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSK 667
+ VF+RPP G RK+I+ST IAET++TIDDVVYVI+SGR K +YD N+ +L WV+K
Sbjct: 472 QAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTK 531
Query: 668 ASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE 727
A+ +QR GRAGR + GICY+L+S+ R + D PEI R +E + L +KLL +I+
Sbjct: 532 ANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLL----HID 587
Query: 728 D---FLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
D FLQ ++ P I+ + +L+ I AL +T LG L L + P M KM+ +
Sbjct: 588 DPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMS 647
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
L CLDP + A A ++ PF P+ ++ R K +A +SD L V
Sbjct: 648 ALFCCLDPITSAAAALSFKSPFYSPLG--KESRVDEIKRRMAR--NMRSDHLMVHNTIIA 703
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN-GFIP----EDVSSCSHNA 899
+++++ E FC + F+SS + L M+ Q +EL+ N F+ +D +S ++
Sbjct: 704 YRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQF-SELLYNYKFLASSNCKDAASNKNSE 762
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPH--KNGRRFVETAG---GAKVRLHPHSLNFKLSFKK 954
++P ++ A++ AGLYP +A LR KN R + T G +V HP S+N S +
Sbjct: 763 KIP-LLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVN---SGES 818
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
D VY + + + + + T+V P+ L++
Sbjct: 819 GFDSAYFVYFQRQKSTD-LFLLDSTMVFPMALII 851
Score = 492 (178.3 bits), Expect = 5.3e-107, Sum P(2) = 5.3e-107
Identities = 110/256 (42%), Positives = 162/256 (63%)
Query: 142 KTRGKRVDI-FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITST 200
+T+ + D+ + PK+ + +++E ++E++A R +E R KLP + D I
Sbjct: 111 ETKERNADLDWVNPKLDER---LQLELGQRQLEENAKKR--LEARKKLPTMKYADDIIQA 165
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVE 258
V NQV+LI G TGCGKTTQVPQ LL+ S+G +C+I+CTQPRRISA ++AE +S E
Sbjct: 166 VRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYE 225
Query: 259 RGENIGDNIGYKIRLES-KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA 317
R E++G+++GY+IRLES K + +SI +CT GVLL+ L S P ++S
Sbjct: 226 RCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSD-----------PLMHNLSV 274
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVP 377
L I+DEIHER +D ++ +++ +LP P L++ILMSAT+ F YF CP+ ++
Sbjct: 275 L---ILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIE 331
Query: 378 GFTYPVKSFYLEDVLS 393
G +PVK YLEDVLS
Sbjct: 332 GVMFPVKMLYLEDVLS 347
Score = 41 (19.5 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 1153 LMSPNTRQYFPLRDHKSRIPAHKGSTKGNQLSTQVAQPP 1191
L P T + RDH + P H G Q + +PP
Sbjct: 442 LDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAV-FRRPP 479
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 679 (244.1 bits), Expect = 7.9e-107, Sum P(3) = 7.9e-107
Identities = 194/519 (37%), Positives = 275/519 (52%)
Query: 514 IKKHME----NALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLL----RKICMD 558
IKKH E N S + KY + +NP I+L LI +LL R
Sbjct: 802 IKKHQEYIPVNTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLIYLDRSPQFR 861
Query: 559 SEDGAILVFLPGWEDINKTRDRLLANP-FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPG 617
+ +GA+L+FLPG I + D L + FF + ++ +I LHS++ + Q F PPPG
Sbjct: 862 NIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSE--RYKVIALHSILSTQDQAAAFTLPPPG 919
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
RKI+L+TNIAET ITI DVV+VID+GR KE Y + +S+L ++VSKASA QR GRA
Sbjct: 920 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 979
Query: 678 GRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI---EDFLQKTL 734
GR + G C+ +Y++ R D+ VPEI R+P+EELCL + CN+ EDFL K L
Sbjct: 980 GRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIM----KCNLGSPEDFLSKAL 1035
Query: 735 DPPVSVTIRNAIIVLQDIGALSLDEK-VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
DPP I NA+ +L+ IGA L+E +T LG+ L L V+ + KML F + CLDP
Sbjct: 1036 DPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1095
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG- 852
TLA + PFT PI K A AK LA SD L + A+ WK A+Q G
Sbjct: 1096 ATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM---ADSDHLTIYNAYLGWKKARQEGG 1150
Query: 853 --QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN-GFIPEDVSSCSHNAR----VP--- 902
E +C + F++ + L ++++L +L+K GF S+ R +P
Sbjct: 1151 YRSEIAYCRRNFLNRTSLLTLEDVKQELM-KLVKAAGFSSSTTSNDWEENRASQTLPFQE 1209
Query: 903 -GIIHAVLMAGLYPMVARL---RPPHKNGRR--FVETAGGAKVRLHPHSLNFKLSFKKTD 956
++ AVL AGLY V ++ + + VETA G K ++HP S+N L
Sbjct: 1210 IALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQG-KAQVHPSSVNRDLQ----- 1263
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
++Y E R +++R T++ P P+LL +I V
Sbjct: 1264 TYGWLLYQEKVRYTR-VYLRETTLITPFPVLLFGGDIEV 1301
Score = 467 (169.5 bits), Expect = 7.9e-107, Sum P(3) = 7.9e-107
Identities = 101/244 (41%), Positives = 158/244 (64%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 539 KAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 598
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 599 STQVPHFLLEDLLLNEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCG 657
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 658 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 703
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 704 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 763
Query: 389 EDVL 392
ED++
Sbjct: 764 EDIV 767
Score = 45 (20.9 bits), Expect = 7.9e-107, Sum P(3) = 7.9e-107
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 1051 VDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHPQKAL 1089
VD W+YF + IA I+ LR + + K+ +P+ +L
Sbjct: 1310 VDGWIYF-QAPVKIAVIFKQLRVLIDSVLRKKLENPKMSL 1348
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 613 (220.8 bits), Expect = 3.0e-106, Sum P(3) = 3.0e-106
Identities = 165/473 (34%), Positives = 249/473 (52%)
Query: 532 DKY---LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFR 588
D+Y +A +N + LIE LL+ I + GA+LVFLPGW I + L NP F
Sbjct: 610 DEYGLXMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFG 669
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
+ ++ I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K
Sbjct: 670 N-HRYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKV 728
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRI 708
K + +NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R
Sbjct: 729 KLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRT 788
Query: 709 PIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
P+ E+ L +KLL I FL K ++PP + A L+++ AL ++++T LG L
Sbjct: 789 PLHEIALSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRIL 847
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L + P KM+ + D T++ A+ + +PF IS E KR A
Sbjct: 848 AKLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPF---IS--EGKRLGYIHRNFA-- 900
Query: 829 YGGQ-SDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G + SD +A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +
Sbjct: 901 -GNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINS 959
Query: 886 GFIPED--VSSCSHNARVPG---IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR 940
GF PED ++ N ++ ++L G+YP V HK R+ + T G
Sbjct: 960 GF-PEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEG-RNAL 1013
Query: 941 LHPHSLNFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
+H S+N S + P V+ E R + + T+V PL LLL A++
Sbjct: 1014 IHKSSVNCPFSSQDMKYPSPFFVFGEKIR-TRAISAKGMTLVTPLQLLLFASK 1065
Score = 532 (192.3 bits), Expect = 3.0e-106, Sum P(3) = 3.0e-106
Identities = 113/247 (45%), Positives = 159/247 (64%)
Query: 151 FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS 210
F P+ EI K E L ++E+D +L+ I++ER LP+ F+ I + N VV++
Sbjct: 350 FATPEQISVEI--KNE-LMYQLEQDRDLQAILQERELLPVKKFESEILEAISQNPVVIVR 406
Query: 211 GETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIG 268
G TGCGKTTQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + G
Sbjct: 407 GATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCG 466
Query: 269 YKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
Y +R ES + H+SI+FCT GVLLR L EA + ++H+IVDEIH
Sbjct: 467 YSVRFESILPRPHASIMFCTVGVLLRKL---------EAG-------IRGISHVIVDEIH 510
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ERD +DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++
Sbjct: 511 ERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF 570
Query: 388 LEDVLSI 394
LED + +
Sbjct: 571 LEDCIQM 577
Score = 44 (20.5 bits), Expect = 3.0e-106, Sum P(3) = 3.0e-106
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 486 ADCQLKAKD--GRTALQLGEQENQPEVAQIIKKHME 519
A+C L D G QL E+E E+ + + K++E
Sbjct: 602 ANCNLICGDEYGLXMAQLNEKETPFELIEALLKYIE 637
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 615 (221.5 bits), Expect = 3.3e-106, Sum P(3) = 3.3e-106
Identities = 166/502 (33%), Positives = 263/502 (52%)
Query: 503 EQENQPEVAQIIKKHME---NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDS 559
E E++ ++ K E N + + Q +A ++ + L+E LL I +
Sbjct: 592 EVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKN 651
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
GAILVFLPGW I L F DTS++ I+P HS +P +Q+KVF+ P G
Sbjct: 652 IPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVT 711
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
KIILSTNIAET+ITIDD+V+VID + + K + +NN+++ + W SK + +QR GRAGR
Sbjct: 712 KIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
+ G C+ L S+ R +L D PE+ R P+ E+ L +KLL +I FL K L+PP
Sbjct: 772 VRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPV 830
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLAC 798
+ A ++L+++ L ++++T LG L L + P + KM+ + C D A+ +
Sbjct: 831 DAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASY 890
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EA 855
+S + + F+L I +++ A K +L G + SD +A+I A + W+ KQRG+ EA
Sbjct: 891 SSTFSEVFSLDIG--QRRLANHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEA 944
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVL 909
FC + MN++ ++QL L + GF E + S + R+ G + A+L
Sbjct: 945 RFCDWKGLQMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALL 1004
Query: 910 MAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRG 969
GLYP + HK R+ + T A + LH S+N + T P V+ E R
Sbjct: 1005 CLGLYPNIC----VHKEKRKVLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIR- 1057
Query: 970 DGGMHVRNCTVVGPLPLLLLAT 991
+ + ++V PL ++L +
Sbjct: 1058 TRAVSCKQLSMVSPLQVILFGS 1079
Score = 537 (194.1 bits), Expect = 3.3e-106, Sum P(3) = 3.3e-106
Identities = 127/276 (46%), Positives = 178/276 (64%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAESNHLDSASLIVPNEDPELTEENKSTLDEA 428
+ SAES V +E+ +L E+K DEA
Sbjct: 579 DFVPSAESRRKRKE---VEDEE-QLLSEDK---DEA 607
Score = 37 (18.1 bits), Expect = 3.3e-106, Sum P(3) = 3.3e-106
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 1194 HGSPVVGSGSGTHIPPGPRGDSFKRPRGN 1222
+G +G G G GDSF+ RG+
Sbjct: 1249 NGGGYGNNGGGYGNKRGGFGDSFESNRGS 1277
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 609 (219.4 bits), Expect = 4.2e-106, Sum P(2) = 4.2e-106
Identities = 163/467 (34%), Positives = 246/467 (52%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 626 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF-GSHRYQ 684
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 685 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 744
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 745 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 804
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP I A L+++ AL ++++T LG L L +
Sbjct: 805 LSIKLLRLG-GIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIE 863
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-S 833
P KM+ + D T++ A+ + +PF IS E KR A G + S
Sbjct: 864 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPF---IS--EGKRLGYIHRNFA---GNRFS 915
Query: 834 DQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A+++ F+ W +A+ G+EA FC Q ++ + M + QL+ LI +GF PED
Sbjct: 916 DHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF-PED 974
Query: 892 --VSSCSHNARVPG---IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
++ N ++ ++L G+YP V HK R+ + T G +H S+
Sbjct: 975 CLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEG-RNALIHKSSV 1029
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
N S + P V+ E R + + T+V PL LLL A++
Sbjct: 1030 NCPFSSQDMKYPSPFFVFGEKIR-TRAISAKGMTLVTPLQLLLFASK 1075
Score = 532 (192.3 bits), Expect = 4.2e-106, Sum P(2) = 4.2e-106
Identities = 110/242 (45%), Positives = 162/242 (66%)
Query: 157 SKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +I+M +++ LT ++E+D NL+ +++ER LP+ F+ I + SN VV+I G TGC
Sbjct: 358 STEQISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGC 417
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQ++L+ + C IV TQPRRISA +VAER++ ERGE G + GY +R
Sbjct: 418 GKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRF 477
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + H+SI+FCT GVLLR L EA + ++H+IVDEIHERD
Sbjct: 478 ESILPRPHASIMFCTVGVLLRKL---------EAG-------IRGISHVIVDEIHERDIN 521
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED +
Sbjct: 522 TDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI 581
Query: 393 SI 394
+
Sbjct: 582 QM 583
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 671 (241.3 bits), Expect = 6.7e-106, Sum P(3) = 6.7e-106
Identities = 185/487 (37%), Positives = 264/487 (54%)
Query: 538 VNPELIDLVLIEQLL-------RKICMDSEDGAILVFLPGWEDINKTRDRLLANP-FFRD 589
+NP I+L LI +LL R + +GA+L+FLPG I + D L + FF +
Sbjct: 837 MNPHKINLDLILELLIYLEIPDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSE 896
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE
Sbjct: 897 --RYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKEN 954
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
Y + +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P
Sbjct: 955 KYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVP 1014
Query: 710 IEELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK-VTELG 765
+EELCL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E +T LG
Sbjct: 1015 LEELCLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLG 1070
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
+ L L V+ + KML F + CLDP TLA + PFT PI K A AK L
Sbjct: 1071 QHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSAL 1128
Query: 826 ASLYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTEL 882
A SD L + A+ WK A+Q G E +C + F++ + L ++++L +L
Sbjct: 1129 AM---ADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELM-KL 1184
Query: 883 IKN-GFIPEDVSSCSHNAR----VP----GIIHAVLMAGLYPMVARL---RPPHKNGRR- 929
+K GF S+ R +P ++ AVL AGLY V ++ + +
Sbjct: 1185 VKAAGFSSSTTSNDWEENRASQTLPFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLA 1244
Query: 930 -FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
VETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1245 CIVETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRYTR-VYLRETTLITPFPVLL 1297
Query: 989 LATEIAV 995
+I V
Sbjct: 1298 FGGDIEV 1304
Score = 467 (169.5 bits), Expect = 6.7e-106, Sum P(3) = 6.7e-106
Identities = 101/244 (41%), Positives = 158/244 (64%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 539 KAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 598
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 599 STQVPHFLLEDLLLNEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCG 657
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 658 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 703
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 704 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 763
Query: 389 EDVL 392
ED++
Sbjct: 764 EDIV 767
Score = 45 (20.9 bits), Expect = 6.7e-106, Sum P(3) = 6.7e-106
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 1051 VDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHPQKAL 1089
VD W+YF + IA I+ LR + + K+ +P+ +L
Sbjct: 1313 VDGWIYF-QAPVKIAVIFKQLRVLIDSVLRKKLENPKMSL 1351
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 675 (242.7 bits), Expect = 7.7e-106, Sum P(3) = 7.7e-106
Identities = 183/484 (37%), Positives = 262/484 (54%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANP-FFRDTSK 592
+NP I+L LI +LL R + +GA+L+FLPG I + D L + FF + +
Sbjct: 837 MNPHKINLDLILELLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSE--R 894
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+ +I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 895 YKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYH 954
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEE 712
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EE
Sbjct: 955 ESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE 1014
Query: 713 LCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKL 768
LCL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1015 LCLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHL 1070
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V+ + KML F + CLDP TLA + PF PI K A AK LA
Sbjct: 1071 AALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIG--RKDEADLAKSALAM- 1127
Query: 829 YGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
SD L + A+ WK A+Q G E +C + F++ + L ++++L +L+K
Sbjct: 1128 --ADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDVKQEL-IKLVKA 1184
Query: 886 -GFIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARL---RPPHKNGRR--FV 931
GF+ S+ R ++ AVL AGLY V ++ + + V
Sbjct: 1185 AGFLSSTTSNSFEGNRATQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIV 1244
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
ETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1245 ETAQG-KAQVHPSSVNRDLQIYGW-----LLYQEKIRY-ARVYLRETTLITPFPVLLFGG 1297
Query: 992 EIAV 995
+I V
Sbjct: 1298 DIEV 1301
Score = 461 (167.3 bits), Expect = 7.7e-106, Sum P(3) = 7.7e-106
Identities = 100/243 (41%), Positives = 155/243 (63%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
K E V +L +++ +++++ER +LP+ + + T+ ++VV+++GETG GK
Sbjct: 539 KVEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGK 598
Query: 218 TTQVPQFLLEHIWSK--GET-CKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGY 269
+TQVP FLLE + G T C IVCTQPRRISA S+A R+ E G EN G N GY
Sbjct: 599 STQVPHFLLEDLLLNEWGTTKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGY 658
Query: 270 KIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHER 329
+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HER
Sbjct: 659 QIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHER 704
Query: 330 DRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
SDF+L I++++L L LILMSAT+D ++FS YF CP++++ G +YPV+ F+LE
Sbjct: 705 SVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFHLE 764
Query: 390 DVL 392
D++
Sbjct: 765 DII 767
Score = 46 (21.3 bits), Expect = 7.7e-106, Sum P(3) = 7.7e-106
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 1049 VVVDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHPQKAL 1089
+ VD W+YF + IA I+ LR + + K+ +P+ +L
Sbjct: 1308 ISVDGWIYF-QAPVKIAVIFKQLRVLIDSVLRKKLENPKMSL 1348
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 659 (237.0 bits), Expect = 8.6e-106, Sum P(3) = 8.6e-106
Identities = 183/481 (38%), Positives = 261/481 (54%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D L ++ F + ++
Sbjct: 839 MNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFY-SERY 897
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 898 QVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 957
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R D+ VPEI R+P+EEL
Sbjct: 958 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEEL 1017
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLGCLS 772
CL + D + EDFL K LDPP I NA+ +L+ IGA +E K+T LG+ L L
Sbjct: 1018 CLHIMKCDLG-SPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALP 1076
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
V+ + KML F + CL+P TLA + PF PI K A AK LA
Sbjct: 1077 VNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG--RKDEADLAKSSLAV---AD 1131
Query: 833 SDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN-GFI 888
SD L + A+ WK A+Q G E +C + F++ + L ++++L +L+K GF
Sbjct: 1132 SDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELM-KLVKAAGFS 1190
Query: 889 PEDVSSCSHNARV-P--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVETA 934
SS S R P ++ AVL AGLY V ++ + VETA
Sbjct: 1191 ----SSPSWEGRKGPQTLSFQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETA 1246
Query: 935 GGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1247 QG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRYTR-VYLRETTLITPFPVLLFGGDIE 1299
Query: 995 V 995
V
Sbjct: 1300 V 1300
Score = 479 (173.7 bits), Expect = 8.6e-106, Sum P(3) = 8.6e-106
Identities = 118/316 (37%), Positives = 178/316 (56%)
Query: 87 KSKKRVETDKGKEILPSLTFSEG--SKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTR 144
+ KKR E +K + P F +KL Q + E G D +S ++ +
Sbjct: 470 EEKKREELNKMETNKPRDLFIAKLLNKLKQQQQQQQQQRPESEKGGSEDPEESWENLVSD 529
Query: 145 GKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSN 204
+ +P + AE V SL R++ +++++ER +LP+ +D I T+ +
Sbjct: 530 EDLAALSLEP--TSAEDLAPVRSLFRRLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRH 587
Query: 205 QVVLISGETGCGKTTQVPQFLLEHIWSK---GETCKIVCTQPRRISATSVAERISVERGE 261
+VV+++GETG GK+TQVP FLLE + C IVCTQPRRISA S+A R+ E G
Sbjct: 588 RVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGC 647
Query: 262 NIGDN-----IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVS 316
G GY+IR+ES+ + + +++CT GVLLR L G+ DVS
Sbjct: 648 ESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLA-----------DVS 696
Query: 317 ALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQV 376
H+IVDE+HER SDF+L I++++L L LILMSAT+D+D+FS YF CP++++
Sbjct: 697 ---HVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRI 753
Query: 377 PGFTYPVKSFYLEDVL 392
G +YPV+ F+LED++
Sbjct: 754 SGRSYPVEVFHLEDIV 769
Score = 45 (20.9 bits), Expect = 8.6e-106, Sum P(3) = 8.6e-106
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 1051 VDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHPQKAL 1089
VD W+YF + IA I+ LR + + K+ +P+ +L
Sbjct: 1309 VDGWIYF-QAPVKIAVIFKQLRVLIDSVLRKKLENPKMSL 1347
Score = 39 (18.8 bits), Expect = 1.3e-59, Sum P(3) = 1.3e-59
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 487 DCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATV 538
+ Q K R A + +P V Q K + N+ +DS LDK + V
Sbjct: 35 EAQSKKPVARPAPAVPTGAREPRVKQGPKIYSFNSANDSGGSANLDKSILKV 86
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 613 (220.8 bits), Expect = 8.9e-106, Sum P(2) = 8.9e-106
Identities = 163/467 (34%), Positives = 246/467 (52%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 625 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPDF-GSHRYQ 683
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 684 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 743
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 744 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 803
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 804 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 862
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-S 833
P KM+ + D T++ A+ + +PF IS E KR A G + S
Sbjct: 863 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPF---IS--EGKRLGYIHRNFA---GNRFS 914
Query: 834 DQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 DHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PED 973
Query: 892 --VSSCSHNARVPG---IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
++ N ++ ++L G+YP V HK R+ + T G +H S+
Sbjct: 974 CLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEG-RNALIHKSSV 1028
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
N S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 NCPFSSQDMKYPSPFFVFGEKIR-TRAISAKGMTLVTPLQLLLFASK 1074
Score = 523 (189.2 bits), Expect = 8.9e-106, Sum P(2) = 8.9e-106
Identities = 109/239 (45%), Positives = 158/239 (66%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 360 QISMDLKNELMYQLEQDHDLPAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 419
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 420 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESV 479
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ ++SI+FCT GVLLR L EA + ++H+IVDEIHERD +DF
Sbjct: 480 LPRPYASIMFCTVGVLLRKL---------EAG-------IRGISHVIVDEIHERDINTDF 523
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 524 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 582
Score = 38 (18.4 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAIL 565
LA PE I + L +L+ ++ D + AIL
Sbjct: 353 LAYATPEQISMDLKNELMYQLEQDHDLPAIL 383
Score = 37 (18.1 bits), Expect = 1.5e-54, Sum P(2) = 1.5e-54
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 81 RRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVL 114
RR+S +RV ++G+E S +S + VL
Sbjct: 447 RRISAVSVAERVAYERGEEPGKSCGYSVRFESVL 480
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 665 (239.2 bits), Expect = 1.6e-105, Sum P(4) = 1.6e-105
Identities = 181/483 (37%), Positives = 260/483 (53%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D + + F +
Sbjct: 841 MNPYKINLELILELLAYLDRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRH 900
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VIDSGR KE Y
Sbjct: 901 RLIALHSVLSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHE 960
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L+ ++VSKASA QR GRAGR + G C+ +Y++ R S ++ VPEI R+P+EEL
Sbjct: 961 SSQMSSLEETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFMEYSVPEILRVPLEEL 1020
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL + LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1021 CLHIM----KCNLGSPEDFLSRALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLA 1076
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK +A
Sbjct: 1077 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSSIALAV 1134
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD L + A+ WK A+Q G E +C + F++ + L ++++L +L++
Sbjct: 1135 ---SDHLTIYNAYLGWKKARQEGGHRAEMTYCRRNFLNRTSLLTLEDVKQEL-IKLVRAA 1190
Query: 886 GFI-PEDVSSCSHNARVPGI-IH------AVLMAGLYPMVARLRPPH-----KNGRRFVE 932
GF P N + +H AVL AGLY V ++ + VE
Sbjct: 1191 GFTAPTTQHRLDGNGGTQSLSLHEIALLKAVLTAGLYDNVGKIMYTKSVDITEKLACLVE 1250
Query: 933 TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
TA G K ++HP S+N L ++Y E R +++R T++ P P+LL +
Sbjct: 1251 TAQG-KAQVHPSSVNRDLQVHGW-----LLYQEKVRY-AKVYLRETTLISPFPILLFGGD 1303
Query: 993 IAV 995
I V
Sbjct: 1304 IEV 1306
Score = 467 (169.5 bits), Expect = 1.6e-105, Sum P(4) = 1.6e-105
Identities = 96/233 (41%), Positives = 153/233 (65%)
Query: 167 SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL 226
+L +++ + ++ ++ER +LP+ + I T+ ++VV+++GETG GK+TQVP FLL
Sbjct: 553 NLFRKLQSSSRYQKFLKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLL 612
Query: 227 EHIW-SKG-ETCKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGK 279
E + +G C IVCTQPRRISA S+A R+ E G G GY+IR+ES+ G+
Sbjct: 613 EDLLLDEGTRKCNIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGE 672
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
+ +++CT GVLLR L G+ +S+++H+IVDE+HER +SDF+L I
Sbjct: 673 ATRLLYCTTGVLLRKLQEDGL--------------LSSISHVIVDEVHERSVHSDFLLVI 718
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F++EDV+
Sbjct: 719 LKEILHKRSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYPVEVFHVEDVI 771
Score = 51 (23.0 bits), Expect = 1.6e-105, Sum P(4) = 1.6e-105
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 122 PPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQI 181
P EP +L A++ +K + K ++ + +MS E ++ S EK+ ++++
Sbjct: 199 PVSQREPPPRL-ADKKKKDNNPETKETNMKEQKEMSMKEWILRYAEQQSDEEKNESVKET 257
Query: 182 VEER 185
EE+
Sbjct: 258 DEEK 261
Score = 41 (19.5 bits), Expect = 1.6e-105, Sum P(4) = 1.6e-105
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 1049 VVVDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHPQKAL 1089
+ VD W++F + IA I+ LR + + K+ +P+ +L
Sbjct: 1313 LTVDGWIHF-QAPVKIAVIFKQLRVLIESVLQKKLENPKMSL 1353
Score = 40 (19.1 bits), Expect = 6.6e-39, Sum P(3) = 6.6e-39
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 707 RIPIEELCLQVKLLDPNCNIED 728
R+ IE + LQ KL +P ++ED
Sbjct: 1335 RVLIESV-LQKKLENPKMSLED 1355
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 608 (219.1 bits), Expect = 1.9e-105, Sum P(2) = 1.9e-105
Identities = 162/467 (34%), Positives = 246/467 (52%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 627 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF-GSHRYQ 685
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 686 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 745
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 746 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 805
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 806 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 864
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-S 833
P KM+ + D T++ A+ + +PF IS E KR A G + S
Sbjct: 865 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPF---IS--EGKRLGYIHRNFA---GNRFS 916
Query: 834 DQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A+++ F+ W +A+ G+EA FC Q ++ + M + QL+ LI +GF PED
Sbjct: 917 DHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF-PED 975
Query: 892 --VSSCSHNARVPG---IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
++ N ++ ++L G+YP V HK R+ + T G +H S+
Sbjct: 976 CLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEG-RNALIHKSSV 1030
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
N S + P V+ E R + + T+V PL LLL A++
Sbjct: 1031 NCPFSSQDMKYPSPFFVFGEKIR-TRAISAKGMTLVTPLQLLLFASK 1076
Score = 523 (189.2 bits), Expect = 1.9e-105, Sum P(2) = 1.9e-105
Identities = 108/242 (44%), Positives = 160/242 (66%)
Query: 157 SKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +I+M +++ L ++E+D NL+ +++ER LP+ F+ I + N VV+I G TGC
Sbjct: 359 STEQISMDLKNELAYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGC 418
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQ++L+ + C IV TQPRRISA +VAER++ ERGE G + GY +R
Sbjct: 419 GKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRF 478
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + H+SI+FCT GVLLR L EA + ++H+IVDEIHERD
Sbjct: 479 ESILPRPHASIMFCTVGVLLRKL---------EAG-------IRGISHVIVDEIHERDIN 522
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED +
Sbjct: 523 TDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI 582
Query: 393 SI 394
+
Sbjct: 583 QM 584
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 607 (218.7 bits), Expect = 2.7e-105, Sum P(2) = 2.7e-105
Identities = 163/467 (34%), Positives = 245/467 (52%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL I + GA+LVFLPGW I + L NP F + ++
Sbjct: 621 MAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 679
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G KIILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 799
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 800 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 858
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-S 833
P KM+ + D T++ A+ + +PF IS E KR A G + S
Sbjct: 859 PRFGKMMIMGCIFYVGDAICTISAATCFPEPF---IS--EGKRLGYIHRNFA---GNRFS 910
Query: 834 DQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PE+
Sbjct: 911 DHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEE 969
Query: 892 --VSSCSHNARVPG---IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
++ N ++ ++L G+YP V HK R+ + T G +H S+
Sbjct: 970 CLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEG-RNALIHKSSV 1024
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
N S + P V+ E R + + T+V PL LLL A++
Sbjct: 1025 NCPFSSQDMKYPSPFFVFGEKIR-TRAISAKGMTLVTPLQLLLFASK 1070
Score = 525 (189.9 bits), Expect = 2.7e-105, Sum P(2) = 2.7e-105
Identities = 108/239 (45%), Positives = 159/239 (66%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ +++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 356 QISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKT 415
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 416 TQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 475
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L EA + ++H+IVDEIHERD +DF
Sbjct: 476 LPRPHASIMFCTVGVLLRKL---------EAG-------IRGISHVIVDEIHERDINTDF 519
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 520 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQM 578
Score = 37 (18.1 bits), Expect = 7.4e-54, Sum P(2) = 7.4e-54
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAIL 565
LA PE I + L +L+ ++ D + A+L
Sbjct: 349 LAYATPEQISMDLKNELMYQLEQDRDLQAVL 379
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 607 (218.7 bits), Expect = 2.7e-105, Sum P(2) = 2.7e-105
Identities = 163/467 (34%), Positives = 245/467 (52%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL I + GA+LVFLPGW I + L NP F + ++
Sbjct: 621 MAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 679
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G KIILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 799
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 800 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 858
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-S 833
P KM+ + D T++ A+ + +PF IS E KR A G + S
Sbjct: 859 PRFGKMMIMGCIFYVGDAICTISAATCFPEPF---IS--EGKRLGYIHRNFA---GNRFS 910
Query: 834 DQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PE+
Sbjct: 911 DHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEE 969
Query: 892 --VSSCSHNARVPG---IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
++ N ++ ++L G+YP V HK R+ + T G +H S+
Sbjct: 970 CLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEG-RNALIHKSSV 1024
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
N S + P V+ E R + + T+V PL LLL A++
Sbjct: 1025 NCPFSSQDMKYPSPFFVFGEKIR-TRAISAKGMTLVTPLQLLLFASK 1070
Score = 525 (189.9 bits), Expect = 2.7e-105, Sum P(2) = 2.7e-105
Identities = 108/239 (45%), Positives = 159/239 (66%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ +++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 356 QISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKT 415
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 416 TQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 475
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L EA + ++H+IVDEIHERD +DF
Sbjct: 476 LPRPHASIMFCTVGVLLRKL---------EAG-------IRGISHVIVDEIHERDINTDF 519
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 520 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQM 578
Score = 37 (18.1 bits), Expect = 7.4e-54, Sum P(2) = 7.4e-54
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAIL 565
LA PE I + L +L+ ++ D + A+L
Sbjct: 349 LAYATPEQISMDLKNELMYQLEQDRDLQAVL 379
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 642 (231.1 bits), Expect = 4.7e-105, Sum P(2) = 4.7e-105
Identities = 146/374 (39%), Positives = 229/374 (61%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF- 587
K LA ++ + I++ L+E LL I +D + GA+LVFLPG +I + ++L +N F
Sbjct: 859 KTLAAMDLDKINMDLVESLLEWI-VDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFN 917
Query: 588 -RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
R T++ V+ PLHS + + +Q+ VF RP G KII+STNIAET++TIDDVVYVIDSGRM
Sbjct: 918 NRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRM 977
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEI 705
KEK YD ++ +L+ WVS+A+A QR GRAGR +G+C+HL++ R L Q+PEI
Sbjct: 978 KEKRYDASRSMESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEI 1037
Query: 706 KRIPIEELCLQVKLLDPNCN--IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
+R+P+E+LCL+VK+L+ ++ + ++PP ++ A L +GAL+ +E +T
Sbjct: 1038 QRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTP 1097
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG L CL V + K++ + CLDPALT+A + ++ PF P E+ F
Sbjct: 1098 LGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAF 1157
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF--CSQYFVSSGVMNMLLGMRKQLQTE 881
LA+ SD LA++ A++ W NA Q G +A + C + F+S + + +++Q E
Sbjct: 1158 SLAN-----SDHLALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQF-AE 1211
Query: 882 LIKN-GFIPEDVSS 894
L+ + GF+ + + +
Sbjct: 1212 LLSDIGFVKDGLKA 1225
Score = 488 (176.8 bits), Expect = 4.7e-105, Sum P(2) = 4.7e-105
Identities = 99/214 (46%), Positives = 143/214 (66%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE---TCKIV 239
E+R KLP ++ I + NQV++ISG TGCGKTTQ+PQF+L++ G I+
Sbjct: 577 EQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVANII 636
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRRISA +VA R++ ER E +G + GY+IRLE+ + ++FCT GVLLR L +G
Sbjct: 637 CTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRL--EG 694
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P ++S +TH+IVDE+HER SDF+L +++D++ L++I+MSATL
Sbjct: 695 ---------DP---ELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATL 742
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
+A+ FSQYF CP I +PG T+PV+ F+LED ++
Sbjct: 743 NAELFSQYFNNCPCIHIPGRTFPVEQFFLEDAIA 776
Score = 96 (38.9 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 63/243 (25%), Positives = 105/243 (43%)
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA--TAAKFELASL--YGG 831
LM F L L A +LA S + P+ NEKK A A LA + Y G
Sbjct: 1114 LMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDHLALMQAYKG 1173
Query: 832 --QSDQLAVIAAFE-CWKNAKQ-RGQEAWFC-SQYFVS--SGVMNMLLGMRKQLQTELIK 884
+ Q A ++ C +N RG + C + F S + + G++ ++ ++
Sbjct: 1174 WCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKDGLKARVIEKMSS 1233
Query: 885 NGF--IPEDVS-SCSHNARVPGIIHAVLMAGLYPMVARLRPPH------KNG-------- 927
G + E + N+ ++ A+L A LYP V ++R P G
Sbjct: 1234 KGSDGVLEATGYEANLNSDNTKLMSAMLCAALYPNVVQVRSPQMKYKLTSKGAMKMQPKA 1293
Query: 928 --RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLP 985
+RF+ + GA V +HP S+NF + + D P +VY E + + +R+C++V P
Sbjct: 1294 EEQRFMTKSDGA-VHIHPSSVNFSV---RHYDSPYLVYHEKVK-TSRVFIRDCSMVCVYP 1348
Query: 986 LLL 988
++L
Sbjct: 1349 MVL 1351
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 649 (233.5 bits), Expect = 6.3e-105, Sum P(2) = 6.3e-105
Identities = 159/437 (36%), Positives = 243/437 (55%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS-KFVI 595
T+NPELI+ VL + ++ +G IL+FLPG+ +I D LL N F + KF++
Sbjct: 729 TINPELIESVL-KYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFIL 787
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
+PLHS + Q VFK+ PPG RKI+LSTNIAET++TIDD V+V+D G MKEK +D
Sbjct: 788 VPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNR 847
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELC 714
N+ +L WVS+A+AKQR GRAGR G+C HLY+ R + VPEI+R+P+E++
Sbjct: 848 NMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIV 907
Query: 715 LQVKLLDP--NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLS 772
L++K L + N L +TL+ P ++ A+ L+D+GAL ++++T LG L L
Sbjct: 908 LRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALP 967
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
V + K++ + + CLD LT+A + PF P+ N++ A K + +L G
Sbjct: 968 VDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPL--NKRTEADKCK-RMFAL--GN 1022
Query: 833 SDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP 889
SD L V+ A+ W + +RG A + S++F+S + + ++ Q L+ GF+P
Sbjct: 1023 SDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVP 1082
Query: 890 EDV-----SSCSHNARVPGII------HAVLMAGLYPMVARLRPPHKN----GRRFVETA 934
DV ++C + + G+ + L+ L + A L P R +++TA
Sbjct: 1083 IDVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSL--LCAALYPNIVKIMTPDRVYIQTA 1140
Query: 935 GGAKVRLHP--HSLNFK 949
GGA R P H L FK
Sbjct: 1141 GGAVPR-EPSHHDLRFK 1156
Score = 477 (173.0 bits), Expect = 6.3e-105, Sum P(2) = 6.3e-105
Identities = 100/230 (43%), Positives = 153/230 (66%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
K+ ++I++ R +LP + + I + ++S+ VV+ISGETGCGK+TQVPQF+L++ + +
Sbjct: 439 KEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRA 498
Query: 234 ------ETC---KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
E +I+CTQPRR+SA VAER++ ER + IG +GY+IRLE+K + + +
Sbjct: 499 LQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLS 558
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S + + ++TH+IVDE+HER SDF+L I++++L
Sbjct: 559 FCTTGILLRRLASDPL--------------LGSVTHVIVDEVHERSEESDFLLLILKNLL 604
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L++ILMSATL+A FS YFGG PV+ +PG T+PV+ +LED+L +
Sbjct: 605 RERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEM 654
Score = 86 (35.3 bits), Expect = 1.0e-44, Sum P(2) = 1.0e-44
Identities = 32/133 (24%), Positives = 58/133 (43%)
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
C +GV G +L T L+ P V + P ++ G P
Sbjct: 1093 CDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMT-----PDRVYIQTAGGAVP-- 1145
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRN 977
R P + RF +T G V++HP S+N ++S + P +V+ E R +++R+
Sbjct: 1146 ---REPSHHDLRF-KTRGDGYVKIHPSSVNSQVSVFQA---PFLVFQEKVR-TSAIYIRD 1197
Query: 978 CTVVGPLPLLLLA 990
C+++ + ++L A
Sbjct: 1198 CSMLPLIAMVLFA 1210
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 586 (211.3 bits), Expect = 9.8e-105, Sum P(4) = 9.8e-105
Identities = 153/467 (32%), Positives = 244/467 (52%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I GA+LVFLPGW I + L NP F ++
Sbjct: 630 MSQLNEKETSFELIEALLKYIETLEVPGAVLVFLPGWNLIYFMQKHLEMNPHFGG-HQYR 688
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q++VF+ P G K+ILSTNIAET+ITI+DVV+V+DS + K K + +
Sbjct: 689 ILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSH 748
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PEI R P+ E+
Sbjct: 749 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVA 808
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I +FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 809 LSIKLLRLG-GIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIE 867
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-S 833
P + KM+ + + D T++ A+ + +PF NE KR F + G + S
Sbjct: 868 PRLGKMMIMGCIFNVGDAVCTISAATCFPEPFI-----NEGKRLG---FVHRNFAGSRFS 919
Query: 834 DQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A+++ F+ W + G++A FC ++ + M + QL+ L+ GF PE+
Sbjct: 920 DHVALLSVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVGF-PEE 978
Query: 892 --VSSCSHNARVPG---IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
++ +N ++ ++L G YP V HK R+ + T G +H S+
Sbjct: 979 CLLNQVFNNVGPDNNLDLVISLLTFGSYPNVCY----HKEKRKILTTEG-RNALIHKSSV 1033
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
N S P V+ E R + ++ T+V PL L+L ++
Sbjct: 1034 NCPFSNHDLKYPSPFFVFGEKIR-TRAISAKSMTLVSPLQLILFGSK 1079
Score = 558 (201.5 bits), Expect = 9.8e-105, Sum P(4) = 9.8e-105
Identities = 116/247 (46%), Positives = 166/247 (67%)
Query: 151 FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS 210
FC P+ ++ + L ++E+D NL+ I+ ERS+LP+ +F++ I ST+ +N VV+I
Sbjct: 361 FCTPEQISNDL---LNELNYQLEQDQNLQTILTERSQLPVKNFQEQIMSTIYNNPVVIIR 417
Query: 211 GETGCGKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIG 268
G TGCGKTTQVPQ++L+ G C IV TQPRRISA SVAER+S ERGE++G + G
Sbjct: 418 GATGCGKTTQVPQYILDEFIKGGRASDCNIVVTQPRRISAVSVAERVSFERGEDVGKSCG 477
Query: 269 YKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
Y +R ES + H+SI+FCT GVLLR L S G+ ++H+IVDEIH
Sbjct: 478 YSVRFESFLPRPHASILFCTVGVLLRKLES-GIR---------------GISHVIVDEIH 521
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ERD +DF+L ++RD++ +YP +R+ILMSAT+D F +YF CPVI+V G +PV+ ++
Sbjct: 522 ERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGRAHPVQEYF 581
Query: 388 LEDVLSI 394
LED + +
Sbjct: 582 LEDCIQM 588
Score = 41 (19.5 bits), Expect = 9.8e-105, Sum P(4) = 9.8e-105
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 113 VLQDLFTHYPPDDGEPGEKLDANQSR 138
V+Q+L H PP +P + Q +
Sbjct: 296 VVQELGIHIPPPPQDPNSPVSLVQGK 321
Score = 40 (19.1 bits), Expect = 7.3e-51, Sum P(3) = 7.3e-51
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 81 RRVSVCKSKKRVETDKGKEILPSLTFS 107
RR+S +RV ++G+++ S +S
Sbjct: 453 RRISAVSVAERVSFERGEDVGKSCGYS 479
Score = 37 (18.1 bits), Expect = 9.8e-105, Sum P(4) = 9.8e-105
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 496 RTALQLGEQENQPEVAQIIKKHME 519
R QL E+E E+ + + K++E
Sbjct: 628 RAMSQLNEKETSFELIEALLKYIE 651
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 658 (236.7 bits), Expect = 1.3e-104, Sum P(3) = 1.3e-104
Identities = 184/484 (38%), Positives = 261/484 (53%)
Query: 538 VNPELIDLVLIEQLL-------RKICMDSEDGAILVFLPGWEDINKTRDRLLANP-FFRD 589
+NP I+L LI +LL R + +GA+L+FLPG I + D L + FF +
Sbjct: 837 MNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSE 896
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
++ +I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VID+GR KE
Sbjct: 897 --RYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKEN 954
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
Y + +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P
Sbjct: 955 KYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVP 1014
Query: 710 IEELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELG 765
+EELCL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG
Sbjct: 1015 LEELCLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLG 1070
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
+ L L V+ + KML F + CLDP TLA + PFT PI K A AK L
Sbjct: 1071 QHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSAL 1128
Query: 826 ASLYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTEL 882
A SD L + A+ WK A+Q G E +C + F++ + + L K+ +T L
Sbjct: 1129 AM---ADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSL-LTLEEIKRRRTTL 1184
Query: 883 IKNGF--IPEDVSSCSHNARVP----GIIHAVLMAGLYPMVARL---RPPHKNGRR--FV 931
+K F I SS + + ++ AVL AGLY V ++ + + V
Sbjct: 1185 LKLIFYSIKTYYSSSRASQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIV 1244
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
ETA G K ++HP S+N L ++Y E R +++R T++ P +LL
Sbjct: 1245 ETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKIRY-ARVYLRETTLITPFSVLLFGG 1297
Query: 992 EIAV 995
+I V
Sbjct: 1298 DIEV 1301
Score = 469 (170.2 bits), Expect = 1.3e-104, Sum P(3) = 1.3e-104
Identities = 101/244 (41%), Positives = 158/244 (64%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 539 KAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 598
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 599 STQVPHFLLEDLLLNEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCG 657
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 658 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 703
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 704 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 763
Query: 389 EDVL 392
ED++
Sbjct: 764 EDII 767
Score = 45 (20.9 bits), Expect = 1.3e-104, Sum P(3) = 1.3e-104
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 1051 VDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHPQKAL 1089
VD W+YF + IA I+ LR + + K+ +P+ +L
Sbjct: 1310 VDGWIYF-QAPVKIAVIFKQLRVLIDSVLRKKLENPKMSL 1348
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 657 (236.3 bits), Expect = 1.7e-104, Sum P(3) = 1.7e-104
Identities = 181/486 (37%), Positives = 259/486 (53%)
Query: 538 VNPELIDLVLIEQLL-------RKICMDSEDGAILVFLPGWEDINKTRDRLLANP-FFRD 589
+NP I+L LI +LL R + +GA+L+FLPG I + D L + FF +
Sbjct: 837 MNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSE 896
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
++ +I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VID+GR KE
Sbjct: 897 --RYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKEN 954
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
Y + +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P
Sbjct: 955 KYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVP 1014
Query: 710 IEELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELG 765
+EELCL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG
Sbjct: 1015 LEELCLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLG 1070
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
+ L L V+ + KML F + CLDP TLA + PFT PI K A AK L
Sbjct: 1071 QHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSAL 1128
Query: 826 ASLYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTEL 882
A SD L + A+ WK A+Q G E +C + F++ + L R L +
Sbjct: 1129 AM---ADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLERRRTTLLKLM 1185
Query: 883 IKNGFIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARL---RPPHKNGRR-- 929
+N F ++ +++R ++ AVL AGLY V ++ + +
Sbjct: 1186 NENAFTHIFIAFTFYSSRASQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLAC 1245
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
VETA G K ++HP S+N L ++Y E R +++R T++ P +LL
Sbjct: 1246 IVETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKIRY-ARVYLRETTLITPFSVLLF 1298
Query: 990 ATEIAV 995
+I V
Sbjct: 1299 GGDIEV 1304
Score = 469 (170.2 bits), Expect = 1.7e-104, Sum P(3) = 1.7e-104
Identities = 101/244 (41%), Positives = 158/244 (64%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 539 KAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 598
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 599 STQVPHFLLEDLLLNEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCG 657
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 658 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 703
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 704 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 763
Query: 389 EDVL 392
ED++
Sbjct: 764 EDII 767
Score = 45 (20.9 bits), Expect = 1.7e-104, Sum P(3) = 1.7e-104
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 1051 VDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHPQKAL 1089
VD W+YF + IA I+ LR + + K+ +P+ +L
Sbjct: 1313 VDGWIYF-QAPVKIAVIFKQLRVLIDSVLRKKLENPKMSL 1351
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 668 (240.2 bits), Expect = 1.6e-103, Sum P(4) = 1.6e-103
Identities = 157/368 (42%), Positives = 220/368 (59%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
KY+A+ ++D L+E+L+ I E+GAILVFLPG +IN +RL A+ FR S
Sbjct: 857 KYIASA---VVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASG 913
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
++PLHS + S +QKKVF RPP G RK+I++TNIAET+ITI+DVVYVIDSG+ KE Y+
Sbjct: 914 DWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYN 973
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLP-DFQVPEIKRIPIE 711
P+ +S++ WVSKA+A+QR GRAGR + G C+ LY++ R L +QVPE+ R+P+
Sbjct: 974 PHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLV 1033
Query: 712 ELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
ELCL +KLL I+ FL K L+PP I +AI++L +GAL DE++T LG L L
Sbjct: 1034 ELCLHIKLLGLG-QIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKL 1092
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLAC-ASDYRDPFTLPISPNEKKRATAA----KFELA 826
V L+ KML + + CL P L++A S + PF R A K E +
Sbjct: 1093 PVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESS 1152
Query: 827 SLYGG---QSDQLAVIAAFECW-KNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQT 880
S QSD L ++ A+E W + ++G +A FC F++S VM M+ R +
Sbjct: 1153 SNLNNNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGM 1212
Query: 881 ELIKNGFI 888
L G I
Sbjct: 1213 LLADIGLI 1220
Score = 404 (147.3 bits), Expect = 1.6e-103, Sum P(4) = 1.6e-103
Identities = 102/277 (36%), Positives = 163/277 (58%)
Query: 159 AEIAMKVESLTSRIEKDANLRQ---IVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+ +A + SL + E +++ +++ R+ LPIS K I + V+++ GETG
Sbjct: 565 SSMAAECSSLKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGS 624
Query: 216 GKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENI-G-DN--IGY 269
GKTTQVPQF+L+ + G C I+CTQPR I+ VA+R++ ER E G DN + Y
Sbjct: 625 GKTTQVPQFILDDMIDSGHGGYCNIICTQPRAIT---VAQRVADERCEPPPGFDNSVVAY 681
Query: 270 KIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHER 329
++R ++ + ++FCT G+LLR LV G + LK+ +THIIVDE+HER
Sbjct: 682 QVRHQNARSDKTRLLFCTTGILLRKLV--GDTTLKD------------VTHIIVDEVHER 727
Query: 330 DRYSDFMLAIIRDMLP------SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPV 383
DF+L I++ ++ + P L++ILMSAT+DA +FS+YFG CP+I G T+PV
Sbjct: 728 SLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPV 787
Query: 384 KSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
+++LED+ K ++ DS + + + D +T++
Sbjct: 788 TTYFLEDIYERTKYLLAS--DSPAAL--SSDTSITDK 820
Score = 89 (36.4 bits), Expect = 1.6e-103, Sum P(4) = 1.6e-103
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 902 PGIIHAVLMAGLYPMVA-----RLRPPHKNGRRF-VETAGGAKVRLHPHSLNFKLSFKKT 955
P ++ A+L AGL P +A RL P + +R+ V G +V +H +S+N K
Sbjct: 1251 PEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYAVWHDGKREVHIHRNSINKNC---KA 1307
Query: 956 DDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
P +V+ E +++++ TVV P +LL I V
Sbjct: 1308 FQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGSINV 1347
Score = 69 (29.3 bits), Expect = 1.7e-68, Sum P(4) = 1.7e-68
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 178 LRQIVEERS-KLPISSFKDVITS-TVDSNQVVLISGE----TGCGKTTQVPQFLLEHIWS 231
L+ ++E++S + K ++ S TVD++Q G+ T G+T V + LE I+
Sbjct: 738 LKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYE 797
Query: 232 KGETCKIVCTQPRRISA-TSVAER---ISVERGE-NI---GDNIGYKIRLESKGGKHSSI 283
+ + + P +S+ TS+ ++ ++V RG+ N+ G Y + +S + SI
Sbjct: 798 RTKYL-LASDSPAALSSDTSITDKLGSVNVPRGKKNLMLAGWGDSYLVSEDSLNTSYDSI 856
Query: 284 VFCTNGVL 291
+ + V+
Sbjct: 857 KYIASAVV 864
Score = 45 (20.9 bits), Expect = 1.6e-103, Sum P(4) = 1.6e-103
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 58 RAVVHEVCKKMGMTSKSSGR--GKQRRVSVCKSKKRVETDKGK 98
+A++H++C++ G + + G+ R S S R + GK
Sbjct: 397 KALLHQLCQRSGWIAPKFNKVTGEGRNFSYTTSVMRKSSGFGK 439
Score = 45 (20.9 bits), Expect = 9.6e-66, Sum P(3) = 9.6e-66
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 226 LEHIWSKGETCKIVCTQPRRISATS--VAERISVERGENIGDNIGY--KIRLESKG-GK 279
L IW KGE KI ++ S +A + + GE G N Y + +S G GK
Sbjct: 383 LNGIWKKGEAQKIPKALLHQLCQRSGWIAPKFNKVTGE--GRNFSYTTSVMRKSSGFGK 439
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 655 (235.6 bits), Expect = 2.0e-103, Sum P(3) = 2.0e-103
Identities = 178/479 (37%), Positives = 256/479 (53%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 840 MNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 898
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 899 QLIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 958
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R ++ VPEI R+P+EEL
Sbjct: 959 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLEYSVPEILRVPLEEL 1018
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLGCLS 772
CL + D + EDFL K LDPP I NA+ +L+ IGA E K+T LG+ L L
Sbjct: 1019 CLHIMKCDLG-SPEDFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALP 1077
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
V+ + KML F + CL+P TLA + PF PI K A AK LA
Sbjct: 1078 VNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG--RKDEADLAKSSLAV---AD 1132
Query: 833 SDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP 889
SD L + A+ WK A+Q G E +C + F++ + L ++++L + GF
Sbjct: 1133 SDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVRAAGF-- 1190
Query: 890 EDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVETAGG 936
S+ + P ++ AVL AGLY V ++ + VETA G
Sbjct: 1191 -SSSTSWEGKKGPQALSFQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQG 1249
Query: 937 AKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
K ++HP S+N L ++Y E R +++R T++ P P+LL +I V
Sbjct: 1250 -KAQVHPSSVNRDLQ-----TYGWLLYQEKVRY-ARVYLRETTLITPFPVLLFGGDIEV 1301
Score = 461 (167.3 bits), Expect = 2.0e-103, Sum P(3) = 2.0e-103
Identities = 114/311 (36%), Positives = 180/311 (57%)
Query: 91 RVETDKGKEILPSLTFSE-GSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVD 149
++ET+K +++ + S+ + LQ H P + E E D +S ++ +
Sbjct: 479 KMETNKPRDLFIAKLLSKLKQQQQLQQQRQH-PENKTETAE--DPEESWENLVSDEDLSA 535
Query: 150 IFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLI 209
+ +P + AE V +L R++ +++++ER +LP+ + I T+ ++VV++
Sbjct: 536 LSLEP--TGAEDLEPVRNLFRRLQSTPKYQRLLKERQQLPVFKHRASIVETLKRHRVVVV 593
Query: 210 SGETGCGKTTQVPQFLLEHIWSK---GETCKIVCTQPRRISATSVAERISVERGENIGDN 266
+GETG GK+TQVP FLLE + C IVCTQPRRISA S+A R+ E G G
Sbjct: 594 AGETGSGKSTQVPHFLLEDLLLNDCGARKCNIVCTQPRRISAVSLATRVCEELGCEGGPG 653
Query: 267 -----IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHI 321
GY+IR+ES+ + + +++CT GVLLR L G+ DVS H+
Sbjct: 654 GRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLA-----------DVS---HV 699
Query: 322 IVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTY 381
IVDE+HER SDF+L I++++L L LILMSAT+D+D+FS YF CP++++ G +Y
Sbjct: 700 IVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSY 759
Query: 382 PVKSFYLEDVL 392
PV+ F+LED++
Sbjct: 760 PVEVFHLEDIV 770
Score = 45 (20.9 bits), Expect = 2.0e-103, Sum P(3) = 2.0e-103
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 1051 VDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHPQKAL 1089
VD W+YF + IA I+ LR + + K+ +P+ +L
Sbjct: 1310 VDGWIYF-QAPVKIAVIFKQLRVLIDSVLRKKLENPKMSL 1348
Score = 41 (19.5 bits), Expect = 2.3e-59, Sum P(3) = 2.3e-59
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 487 DCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATV 538
+ Q K R A + +P V Q K + N+ +DS LDK + V
Sbjct: 35 EAQSKKPVARPAPAVPTSAREPRVKQGPKIYSFNSANDSGGSANLDKSILKV 86
Score = 41 (19.5 bits), Expect = 6.3e-59, Sum P(4) = 6.3e-59
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 135 NQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESL 168
N+ KS+ ++G + P+ KA I+ + S+
Sbjct: 239 NEEEKSEGSKGSEDEDKFDPQQKKANISAYLPSI 272
Score = 38 (18.4 bits), Expect = 6.3e-59, Sum P(4) = 6.3e-59
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 505 ENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKI 555
EN+ E A+ ++ EN +SD + L L E DL + L R++
Sbjct: 511 ENKTETAEDPEESWENLVSD---EDLSALSLEPTGAE--DLEPVRNLFRRL 556
Score = 38 (18.4 bits), Expect = 1.3e-58, Sum P(4) = 1.3e-58
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERS 186
+A ++ +++ T R E+D ++ EE+S
Sbjct: 194 QATLSPPLQTKTKRQEEDPKIKPKKEEKS 222
Score = 37 (18.1 bits), Expect = 8.0e-59, Sum P(4) = 8.0e-59
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 420 ENKSTLDEAISLAWSNDEFDMLLELVSLE 448
ENK+ E +W N D L +SLE
Sbjct: 511 ENKTETAEDPEESWENLVSDEDLSALSLE 539
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 603 (217.3 bits), Expect = 3.8e-103, Sum P(3) = 3.8e-103
Identities = 160/456 (35%), Positives = 240/456 (52%)
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPS 604
L LIE LL+ I + GA+LVFLPGW I + L NP F S + I+PLHS +P
Sbjct: 636 LELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHS-YCILPLHSQIPR 694
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +NN++ + W
Sbjct: 695 DEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVW 754
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
SK + +QR GRAGR + G C+HL S+ R L PEI R P+ E+ L +KLL
Sbjct: 755 ASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLG- 813
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I FL K ++PP + A L+++ AL ++++T LG L L + P + KM+
Sbjct: 814 GIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIG 873
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIAAFE 843
+ D T++ A+ + +PF IS E +R A G + SD +A+++ F+
Sbjct: 874 CIFYVGDALCTISAATCFPEPF---IS--EGRRLGYVHRNFA---GNRFSDHVALLSVFQ 925
Query: 844 CWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARV 901
W +A+ G++A FC ++ + M + QL+ L+ GF E + + N
Sbjct: 926 AWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNAGFPEECLMNQVFNNTG 985
Query: 902 PG----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD- 956
P ++ ++L G+YP V HK R+ + T G +H S+N S +
Sbjct: 986 PDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEG-RNALIHKSSVNCPFSNQDLKY 1040
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
P V+ E R + + T+V PL LLL A++
Sbjct: 1041 PSPFFVFSEKIR-TRAISAKGMTMVSPLQLLLFASK 1075
Score = 519 (187.8 bits), Expect = 3.8e-103, Sum P(3) = 3.8e-103
Identities = 106/224 (47%), Positives = 154/224 (68%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL-EHIWS- 231
+D N++Q++ +R LP+ F++ I V ++ VV+I G TGCGKTTQVPQ++L E+I +
Sbjct: 376 QDPNIKQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRND 435
Query: 232 KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGV 290
+ C IV TQPRRISA SVAER++ ERGE IG + GY +R ES + H+S++FCT GV
Sbjct: 436 RAAQCNIVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGV 495
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
LLR L S G+ ++H+IVDEIHERD +DF+L ++RD++ ++P +
Sbjct: 496 LLRKLES-GIR---------------GISHVIVDEIHERDINTDFLLVVLRDVIQAFPEI 539
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
R+ILMSAT+D F +YF CP+I+V G T+PV+ +YLED + +
Sbjct: 540 RVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYLEDCIQM 583
Score = 44 (20.5 bits), Expect = 2.5e-53, Sum P(3) = 2.5e-53
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 81 RRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVL 114
RR+S +RV ++G+EI S +S + VL
Sbjct: 448 RRISAVSVAERVAFERGEEIGKSCGYSVRFESVL 481
Score = 38 (18.4 bits), Expect = 3.8e-103, Sum P(3) = 3.8e-103
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 496 RTALQLGEQENQPEVAQIIKKHME 519
R+ QL E+E E+ + + K++E
Sbjct: 624 RSMSQLSEKETPLELIEALLKYIE 647
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 642 (231.1 bits), Expect = 8.8e-103, Sum P(3) = 8.8e-103
Identities = 182/486 (37%), Positives = 258/486 (53%)
Query: 538 VNPELIDLVLIEQLL-------RKICMDSEDGAILVFLPGWEDINKTRDRLLANP-FFRD 589
+NP I+L LI +LL R + +GA+L+FLPG I + D L + FF +
Sbjct: 837 MNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSE 896
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
++ +I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VID+GR KE
Sbjct: 897 --RYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKEN 954
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
Y + +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P
Sbjct: 955 KYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVP 1014
Query: 710 IEELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELG 765
+EELCL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG
Sbjct: 1015 LEELCLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLG 1070
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
+ L L V+ + KML F + CLDP TLA + PFT PI K A AK L
Sbjct: 1071 QHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSAL 1128
Query: 826 ASLYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQL-QTE 881
A SD L + A+ WK A+Q G E +C + F++ + L ++ +T
Sbjct: 1129 AM---ADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKVSFPETI 1185
Query: 882 LIKNGFIPEDV-----SSCSHNARVPGI--IHAVLMAGLYPMVARL---RPPHKNGRR-- 929
I+ + + SS S I + AVL AGLY V ++ + +
Sbjct: 1186 AIQYFYRFYSIKTYYSSSASQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLAC 1245
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
VETA G K ++HP S+N L ++Y E R +++R T++ P +LL
Sbjct: 1246 IVETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKIRY-ARVYLRETTLITPFSVLLF 1298
Query: 990 ATEIAV 995
+I V
Sbjct: 1299 GGDIEV 1304
Score = 469 (170.2 bits), Expect = 8.8e-103, Sum P(3) = 8.8e-103
Identities = 101/244 (41%), Positives = 158/244 (64%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 539 KAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 598
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 599 STQVPHFLLEDLLLNEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCG 657
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 658 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 703
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 704 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 763
Query: 389 EDVL 392
ED++
Sbjct: 764 EDII 767
Score = 45 (20.9 bits), Expect = 8.8e-103, Sum P(3) = 8.8e-103
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 1051 VDRWLYFGSTALDIAQIYC-LRERLSVAILFKVTHPQKAL 1089
VD W+YF + IA I+ LR + + K+ +P+ +L
Sbjct: 1313 VDGWIYF-QAPVKIAVIFKQLRVLIDSVLRKKLENPKMSL 1351
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 615 (221.5 bits), Expect = 2.6e-101, Sum P(2) = 2.6e-101
Identities = 165/499 (33%), Positives = 262/499 (52%)
Query: 503 EQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDG 562
+ E EV K N L+D + L ++ ++ + I +IE +L I DG
Sbjct: 603 DDEGDEEVDD--KGRNMNILTDPSINESLKTAMSRISEKDIPFGVIEAILNDIASRGVDG 660
Query: 563 AILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
A+LVFLPGW +I +RLL + F +K+ I+PLHS + S +Q+KVF P G RKII
Sbjct: 661 AVLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYP-GKRKII 719
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQA 682
+STNIAET+ITIDDVVYVIDS + KE+ Y NN+ + W SK + QR GRAGR +A
Sbjct: 720 VSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVRA 779
Query: 683 GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTI 742
G +HL S++R +L D E+ RIP+ ++ L +KLL ++ +FL K L PP +
Sbjct: 780 GYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLG-SVGEFLGKALQPPPYDMV 838
Query: 743 RNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDY 802
+ VLQ +GAL + ++T LG+ L + + P+++K+L + +A A +
Sbjct: 839 VESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSF 898
Query: 803 RDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCS 859
PF P EK + + + SD +A+++ + ++ A Q G A FC
Sbjct: 899 PTPFV----PREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYREAVQMGASAAEREFCE 954
Query: 860 QYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS-SCSHNARVP----GIIHAVLMAGLY 914
+Y +S+ V+ M G R+QL L PED+ S N P ++ ++L+ LY
Sbjct: 955 RYSLSNPVLKMTDGARRQLIDVLRNQCSFPEDILFDISVNVNGPDRELNLMRSLLVMALY 1014
Query: 915 PMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDD--CPLMVYDEITRGDGG 972
P VA + G+R V T + ++ +S+ ++ ++ D PL+V+ E R
Sbjct: 1015 PNVA-----YYVGKRKVLTIEQSSALINKYSMLVPMNNRQEMDFPSPLLVFTEKVR-TRC 1068
Query: 973 MHVRNCTVVGPLPLLLLAT 991
+ + +V+ + LL+ +
Sbjct: 1069 ISCKQMSVISAIQLLVFGS 1087
Score = 479 (173.7 bits), Expect = 2.6e-101, Sum P(2) = 2.6e-101
Identities = 108/249 (43%), Positives = 160/249 (64%)
Query: 163 MKVESLTSRI-EKD-----ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
M +E ++ RI EK+ L +I +R +LP++ +++ I TV N+V LI GETGCG
Sbjct: 350 MSMEQISQRIMEKEDFKRGEALDKITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCG 409
Query: 217 KTTQVPQFLLEHIW--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
K+TQV QFLLE S G + V +QPRRISA S+AER++ ERGE +G+ GY +R +
Sbjct: 410 KSTQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGEEVGETCGYNVRFD 469
Query: 275 SKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
S + + SI+FCT GVLLR++ ++ + ++H+I+DEIHERD +
Sbjct: 470 SATPRPYGSIMFCTVGVLLRMM----------------ENGLRGISHVIIDEIHERDVDT 513
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF------GGCPVIQVPGFTYPVKSFY 387
DF+L ++R+M+ +Y LR++LMSAT+D D F+ +F G PVI + G T+PV+SFY
Sbjct: 514 DFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFY 573
Query: 388 LEDVLSILK 396
LED+L L+
Sbjct: 574 LEDILHNLQ 582
Score = 46 (21.3 bits), Expect = 4.3e-55, Sum P(3) = 4.3e-55
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 122 PPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRI-EKD 175
PPDD E E++D DK G+ ++I P ++++ +++ SRI EKD
Sbjct: 600 PPDDDEGDEEVD-------DK--GRNMNILTDPSINES-----LKTAMSRISEKD 640
Score = 43 (20.2 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 1152 SLMSPNTRQYFPLRDHKSRIPAHKGSTKGNQLSTQVAQPPLFHG 1195
S MS T + P H SR+ + GN+ S VA + G
Sbjct: 894 SAMSFPT-PFVPREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQG 936
Score = 41 (19.5 bits), Expect = 4.3e-55, Sum P(3) = 4.3e-55
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 81 RRVSVCKSKKRVETDKGKEI 100
RR+S +RV ++G+E+
Sbjct: 439 RRISAISLAERVANERGEEV 458
Score = 39 (18.8 bits), Expect = 5.6e-40, Sum P(2) = 5.6e-40
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
C Q V S + ++ G RK E + G + D + R+ + A + GL P +
Sbjct: 1071 CKQMSVISAIQLLVFGSRK---VECVGEGLVRIDETI---TIRM-NVSTAAALIGLRPCI 1123
Query: 918 ARL 920
L
Sbjct: 1124 EAL 1126
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 648 (233.2 bits), Expect = 7.5e-100, Sum P(2) = 7.5e-100
Identities = 148/374 (39%), Positives = 231/374 (61%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
D+ V+ E+I L LI ++ K+ SED +IL+FLPGWEDI++TR+ + +P R+ +
Sbjct: 922 DEQSDDVDHEMI-LQLIVHIVTKVSSTSED-SILIFLPGWEDISQTRELMRRHPMLRNEN 979
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+F+I+PLHS V Q KVF++PPP RKI+LSTNIAET+ITI+DVVYVIDS ++K K +
Sbjct: 980 EFLILPLHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYH 1039
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQA-GICYHLYSQLRAASLPDFQVPEIKRIPI 710
+ +++ Q+ W K+S KQR GRAGR + G+CYH+ S+ R +L +FQ+ E++R+P+
Sbjct: 1040 ETQRDLTLFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNTLEEFQLSEMRRMPL 1099
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
ELCLQVK+L ++ FL + L+PP + +I NAI +L D+GAL+ ++++T LG +L
Sbjct: 1100 HELCLQVKVLVLG-DVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLGLQLSF 1158
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISP------NEKKRATAAKF- 823
+ V P + KM+ CLDP LT+A S+ ++P T + N + +
Sbjct: 1159 IPVDPRIGKMIILGSYFRCLDPILTIASFSNQKNPITTLYNQGNDNNNNNNNNNNNSYYN 1218
Query: 824 --------ELASLYGG-QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGM 874
+ +LY QSD L+ + F W ++ G E +C Q F+S ++ +L +
Sbjct: 1219 NYYQQQPQQPKNLYPELQSDHLSFLNIFNGWLQSRMDGTEDQYC-QDFLSIPLLQQILKV 1277
Query: 875 RKQLQTELIKNGFI 888
+KQL + + G I
Sbjct: 1278 KKQLLSTINDLGII 1291
Score = 433 (157.5 bits), Expect = 7.5e-100, Sum P(2) = 7.5e-100
Identities = 99/296 (33%), Positives = 167/296 (56%)
Query: 121 YPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ 180
Y ++ P + L N+ + + +D+ ++S I + R + A ++
Sbjct: 652 YQNNEFYPRKILQLNKKINTYTPQQTLLDVKSFEELSDIGIERRAYEHNKR--QTAEYKR 709
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET--CKI 238
I ++R++LPI + + ++ +NQ+++I G+TGCGKTTQ+PQF++E + G C I
Sbjct: 710 IYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCNI 769
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLVS 297
V TQPRRIS AER++ ER E +GD +GY+IR ++ +S ++ CT G+LL+ + S
Sbjct: 770 VMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYS 829
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+L S H+ +DE+HERD ++DF+L I++ +L +LR+ILMSA
Sbjct: 830 D--MKLHNVS------------HLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSA 875
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNE 413
T+D S YFG CPVI++ + + + ++LED+ L ++ D S V +E
Sbjct: 876 TMDNSLVSAYFGTCPVIKLTSYHHIAQEYFLEDISKQLNDPTISYRDEQSDDVDHE 931
Score = 111 (44.1 bits), Expect = 2.4e-42, Sum P(2) = 2.4e-42
Identities = 37/128 (28%), Positives = 64/128 (50%)
Query: 832 QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTEL--------- 882
QSD L+ + F W ++ G E +C Q F+S ++ +L ++KQL + +
Sbjct: 1236 QSDHLSFLNIFNGWLQSRMDGTEDQYC-QDFLSIPLLQQILKVKKQLLSTINDLGIINAQ 1294
Query: 883 IKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLH 942
+++GF+ S + N+ II A++ +GL+P +AR R R F +T LH
Sbjct: 1295 LRDGFVNN--SFFNENSNNLDIIRAIICSGLFPNIARQRKK----REF-KTLS-ENTFLH 1346
Query: 943 PHSLNFKL 950
P S+ + L
Sbjct: 1347 PSSIVYNL 1354
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 556 (200.8 bits), Expect = 4.9e-98, Sum P(5) = 4.9e-98
Identities = 127/377 (33%), Positives = 213/377 (56%)
Query: 531 LDKYLATVNPELIDLVLIEQLLRKICMD--SEDGAILVFLPGWEDINKTRDRLLANPF-- 586
L++ +++ + I+L ++E L+ + +D +ILVF+PG DI + RL P
Sbjct: 865 LNQLKISIDQKRINLDVVESLILHLVNGVLKKDKSILVFVPGLSDILELCSRL-GKPIST 923
Query: 587 FRDT--SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSG 644
F + + +PLHS + Q+KVF++ P G K++++TNIAET+ITI+DV V+D G
Sbjct: 924 FTEAICQRIWCVPLHSSLSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCG 983
Query: 645 RMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPE 704
R+ + +++ S + W SKAS +QRAGRAGR +G+C+ ++++ + L D PE
Sbjct: 984 RVNQMTFNSITGNSVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFTKSMESQLQDQDTPE 1043
Query: 705 IKRIPIEELCLQVKLL---DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK- 760
I R +++LCL VKL + N I+DFL + ++PP S I+++I L I AL ++++
Sbjct: 1044 ILRTSLQQLCLHVKLFLKNNKNTTIQDFLNRAIEPPSSEQIQSSINELISIDALKINQQQ 1103
Query: 761 ---VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR 817
+T LG L L V + KML F + CLDP LT+A +Y+ PF ++P +K
Sbjct: 1104 QQELTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNYKSPF---LNPPDKTI 1160
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQ 877
KF + QSD +I A+ W+ + Q G E FC + ++S + + ++ Q
Sbjct: 1161 RPMDKFSSPN----QSDHQTLINAYNSWRKSIQDGNEYQFCRENYLSIPTLRTIQDLKLQ 1216
Query: 878 LQTELIKNGFIPEDVSS 894
L + GF+P+ +++
Sbjct: 1217 FVEILSEIGFLPQSITA 1233
Score = 477 (173.0 bits), Expect = 4.9e-98, Sum P(5) = 4.9e-98
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
++++R LP+ K + NQVV+I+ ETGCGK+TQ+PQ++LE S KG C I
Sbjct: 618 VIKKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSECNI 677
Query: 239 VCTQPRRISATSVAERISVERG----EN-IGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
VCTQPRRISA VAER+S E EN IG +GY+IR ESK + + ++FCT G+LLR
Sbjct: 678 VCTQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLR 737
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
R+ + SN +S L+HII+DE+HER +DF+L I+R+++ L++I
Sbjct: 738 --------RILDVSN------ISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKII 783
Query: 354 LMSATLDADRFSQYFGGCP---VIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
LMSATL+A + + YF C + +PGFT+PVK+ Y+ +VL ++ N+ DS +
Sbjct: 784 LMSATLNAKQIANYFK-CTDDSIFSIPGFTFPVKNIYINEVLPLINKYNPNYKDSITTTT 842
Query: 411 PNEDPELTEENKSTLDEAIS 430
T + +E ++
Sbjct: 843 TTTTTTTTNDTNEDEEEILN 862
Score = 76 (31.8 bits), Expect = 4.9e-98, Sum P(5) = 4.9e-98
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 872 LGMRKQLQTELIKNGFIPEDVSSC-SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
L ++Q + N I E V + N+ II +VL AG+YP +AR+ P ++
Sbjct: 1239 LQQQQQQKGNNYSNDCIDEFVGYIYNSNSSKSKIITSVLCAGMYPKIARIDYPDA---KY 1295
Query: 931 VETAGGA-KVRLHPHSLNFKLSFKKTDDC 958
+TA GA K + P SL L K +C
Sbjct: 1296 SQTASGAIKNKYSPESL---LLLTKPPNC 1321
Score = 55 (24.4 bits), Expect = 4.9e-98, Sum P(5) = 4.9e-98
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 1044 DKSV-TVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMAS 1102
DKS T+ +D+WL F +T+ I I L+E + ILF QK P S +
Sbjct: 1385 DKSYQTISLDKWLKFKATSGKI--IVLLKE---IRILFNHLLKQKIDQPSYSTSSSIIID 1439
Query: 1103 ILS 1105
I++
Sbjct: 1440 IIT 1442
Score = 52 (23.4 bits), Expect = 1.6e-95, Sum P(5) = 1.6e-95
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 938 KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+V +HP S NFK + P ++Y++ + + + + T + PL LLL +
Sbjct: 1329 RVFIHPRSTNFK---EGEWVYPFIIYNDKVK-TSKLFLHHITNLSPLTLLLFS 1377
Score = 46 (21.3 bits), Expect = 4.9e-98, Sum P(5) = 4.9e-98
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 52 NLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSK 111
++S +VH + ++ SS S + +K+++ +K KEI+ S G K
Sbjct: 212 HMSEEAMRIVHSLVLELCQNDVSSSSSDIASTSTYEERKQLD-EKEKEIILSTLVELGFK 270
Score = 41 (19.5 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 456 YQHTLTGLTPLMVL----AGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGE 503
+ H +T L+PL +L G + +SL + KA G+ + L E
Sbjct: 1361 FLHHITNLSPLTLLLFSLGGNIEIDKSYQTISLDKWLKFKATSGKIIVLLKE 1412
Score = 40 (19.1 bits), Expect = 2.1e-97, Sum P(5) = 2.1e-97
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 138 RKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRI-EKD 175
+K+ R +++ KP K ++ +K E +I EK+
Sbjct: 88 QKNQMDRPNYIEVKSKPGKHKFKVILKFEGKKKQITEKE 126
Score = 40 (19.1 bits), Expect = 2.1e-97, Sum P(5) = 2.1e-97
Identities = 24/105 (22%), Positives = 43/105 (40%)
Query: 94 TDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCK 153
T KG + P+ T +G K ++ PP + G K+ + T G + K
Sbjct: 13 TGKGGKSAPAPTPDKGGKGGKKETSAPVPPTSDKKGGKVSGVKDSVVAPTTGLPLAPE-K 71
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLR-QIVEERSKLPISSFKDVI 197
P+ + + V+ L +K+ R +E +SK FK ++
Sbjct: 72 PRWTGKQ---PVQYLNEYCQKNQMDRPNYIEVKSKPGKHKFKVIL 113
Score = 39 (18.8 bits), Expect = 1.2e-43, Sum P(5) = 1.2e-43
Identities = 33/154 (21%), Positives = 60/154 (38%)
Query: 470 AGK-GRVGD-VCM-LLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSM 526
AG+ GR +C + + + QL+ +D L+ Q+ V +K + + D +
Sbjct: 1013 AGRAGRTSSGLCFKVFTKSMESQLQDQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQDFL 1072
Query: 527 KQQLLDKYLATVNPELIDLVLIEQLLRKICMDSED-----GAILVFLPGWEDINKTRDRL 581
+ + + + +L+ I+ L KI + G L LP I K L
Sbjct: 1073 NRAIEPPSSEQIQSSINELISIDAL--KINQQQQQELTPLGYHLASLPVDVYIGKM---L 1127
Query: 582 LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
L FR + P+ ++ ++ K F PP
Sbjct: 1128 LFGCIFR-----CLDPILTIAATLNYKSPFLNPP 1156
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 547 (197.6 bits), Expect = 7.6e-97, Sum P(3) = 7.6e-97
Identities = 132/364 (36%), Positives = 202/364 (55%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDS--ED--GAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ ID LI QL+ +I D +D AILVFLPG +I D LL + F+
Sbjct: 937 LAQMDEYKIDFDLIVQLISRIASDPNYQDYSKAILVFLPGIAEIRTLNDLLLGDRSFQQN 996
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + +Q+ F PP G RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 997 --WLVYPLHSTIATEEQEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1054
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R A + D Q PE+ R+
Sbjct: 1055 FDERRQMSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLS 1114
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L K LDPP + IR AI L D+ AL+ E +T LG +L
Sbjct: 1115 LQDLAIRVKICKIG-GIEETLSKALDPPSAKNIRRAIDALIDVRALTQGEDLTPLGNQLA 1173
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD A+T+A + PF P ++ +A +
Sbjct: 1174 RLPLDVFLGKLILLGSIFKCLDMAITVAAILSSKSPFVAPFG--QRSQADTVRLGFRR-- 1229
Query: 830 GGQSDQLAVIAAFECWKNA-----KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L V A+ WK QE FC + F+S + + ++ QL L+
Sbjct: 1230 -GDSDILTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQLLVSLVD 1288
Query: 885 NGFI 888
+ F+
Sbjct: 1289 SKFL 1292
Score = 524 (189.5 bits), Expect = 7.6e-97, Sum P(3) = 7.6e-97
Identities = 117/308 (37%), Positives = 185/308 (60%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ ++ R +LP+ +F++ + S VD +QVV++ GETGCGK+TQVP FLLEH ++G+ CKI
Sbjct: 682 QNMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGKACKI 741
Query: 239 VCTQPRRISATSVAERISVERGE---NIGDN---IGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A R+S E GE ++G + +GY IRLE+ + + +VF T G+++
Sbjct: 742 YCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVM 801
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L E SN D+ +TH+++DE+HER SDF+L +++ ++ L++
Sbjct: 802 RML---------EGSN-----DLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKV 847
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
+LMSAT+DADRFS Y G PV+ VPG T+PV+ +LED + + + L+ +
Sbjct: 848 VLMSATVDADRFSNYLDGAPVLNVPGRTFPVQVNFLEDAVELTGYTIDQKVPQERLVEID 907
Query: 413 EDPELTEENKSTLDEAISL-AWSN---------DE----FDMLLELVS-LEGSPNVYNYQ 457
ED E+ E+ S + SL +S DE FD++++L+S + PN +Y
Sbjct: 908 EDAEVEPESSSKTELLKSLKGYSTRTRNTLAQMDEYKIDFDLIVQLISRIASDPNYQDYS 967
Query: 458 HTLTGLTP 465
+ P
Sbjct: 968 KAILVFLP 975
Score = 45 (20.9 bits), Expect = 1.2e-46, Sum P(3) = 1.2e-46
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLL 531
K KD Q QE +P VAQ + + ++ M ++L
Sbjct: 390 KIKDEEAKAQAASQEPEPAVAQSAEDEIARE-AEKMAAEIL 429
Score = 38 (18.4 bits), Expect = 7.6e-97, Sum P(3) = 7.6e-97
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEI 161
EP K + KS T ++V + C ++ E+
Sbjct: 272 EPDTKKKRKKDGKSRATSPRKVAVTCDEEIEPDEL 306
Score = 38 (18.4 bits), Expect = 4.8e-47, Sum P(2) = 4.8e-47
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 493 KDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQ 529
K T + +Q + E+ +++KH D+ +Q+
Sbjct: 80 KQELTPEEFEKQLEESELQLLVEKHAAKVRRDAQRQR 116
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 432 (157.1 bits), Expect = 3.5e-93, Sum P(4) = 3.5e-93
Identities = 90/220 (40%), Positives = 141/220 (64%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+++ + R+ LP S + D + ++ S VV+ISG TGCGKTTQVPQF+L+ + ++
Sbjct: 172 KELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVRV 231
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+ TQPRRI+A S+AER++ ERGE IG +GY++RL+S+ + + +CT GVLLR+L S
Sbjct: 232 MVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLRMLTSD 291
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
V+ S +THI++DEIHER+ +D++L +R+ L P L++ILMSAT
Sbjct: 292 PVA--------------SGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSAT 337
Query: 359 LDADR--FSQYFGG--CPVIQVPGFTYPVKSFYLEDVLSI 394
++ + FS YF VI++ + VK FYL+ +L++
Sbjct: 338 IEGNMQLFSNYFENHSMDVIRIESRAFDVKVFYLDQILAM 377
Score = 409 (149.0 bits), Expect = 3.5e-93, Sum P(4) = 3.5e-93
Identities = 95/268 (35%), Positives = 151/268 (56%)
Query: 496 RTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKI 555
+TAL P++ ++ K + L K L Y ++ N +D VL++Q+++ +
Sbjct: 582 KTALPDRTVYYHPQMNDVVDKTDFSKLRFGEKYNLF--YGSSSNNS-VDYVLLDQVIQYL 638
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLA-NPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
G ILVFLPG+EDI + + ++ +++PLHS + S+ +FK
Sbjct: 639 ADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSLKNMKNVIVLPLHSQMTSINHGDIFKSV 698
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
P RKIIL+TNIAE +ITI+DV++V+D+G++KEKS+D +STL +++++A QR+
Sbjct: 699 PKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRS 758
Query: 675 GRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC-NIEDFLQKT 733
GRAGR G C LY++ S+P+ Q+ E+KR I ++ L KL P I +FL
Sbjct: 759 GRAGRVANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLA 818
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKV 761
+PP +I AI L+ IGA K+
Sbjct: 819 PEPPEKESILQAITFLEQIGAFYTPIKI 846
Score = 205 (77.2 bits), Expect = 3.5e-93, Sum P(4) = 3.5e-93
Identities = 73/255 (28%), Positives = 120/255 (47%)
Query: 758 DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR 817
D ++T+LG + L + P +S+ML F + + CL P + L R+P+ L +S ++
Sbjct: 870 DPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALS-EDRDL 928
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFE--CWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMR 875
+ KFE+A SD L I C KN Q+ Q FC +F++ M M+ G R
Sbjct: 929 QSKMKFEMAQQ--DLSDHLLYIRLCNEFCSKNNSQQNQ---FCRDHFLNFSTMRMVQGTR 983
Query: 876 KQLQTELIKNGFI---PE-DVSSC--SHN----ARVPGIIHAVLMAGLYPMVARLRPPHK 925
+QL EL++ I P DV + H+ ++ +I AV+ AG YP + +
Sbjct: 984 RQLLRELVRAKLINISPNRDVLTVLTDHHFNQFSQCWPMIQAVIAAGCYPFIG-VSASES 1042
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFK--KTDDCPLMVY---DEITR--GDGGMHVRNC 978
N ++ V+T LHP S+ K K K++ P + Y E+ + D + ++
Sbjct: 1043 NLKK-VQTFNDKPAFLHPSSMVKKQIVKMGKSEKSPRVEYVAFQEMCQMPSDRSLSMKTV 1101
Query: 979 TVVGPLPLLLLATEI 993
TV+ + LL I
Sbjct: 1102 TVIPSMTALLFTGPI 1116
Score = 82 (33.9 bits), Expect = 3.5e-93, Sum P(4) = 3.5e-93
Identities = 37/136 (27%), Positives = 56/136 (41%)
Query: 23 TVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRR 82
T E R+ ++I+ FL S + T + + +R V+HEV MT+KS GR R
Sbjct: 37 TRKEYRRVA-NEIIRSFLKSGQKNTTLEP-MGRDQRKVMHEVALLNEMTTKSHGREPDRY 94
Query: 83 VSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDK 142
+ + K R+ P +T S L +P E E L Q+++
Sbjct: 95 MILSKRVNRLSKSTLVATEP-ITPSFECLQKLSKFVEKHPITREEMDEFLTETQTKQMHT 153
Query: 143 TRGKRVDIFCKPKMSK 158
T+G D P SK
Sbjct: 154 TKGHISDRMVIPPKSK 169
Score = 45 (20.9 bits), Expect = 9.7e-39, Sum P(3) = 9.7e-39
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 831 GQSDQLAVIAAFECWKNA 848
G D ++ A +CWKN+
Sbjct: 653 GYEDIQQMLKAIDCWKNS 670
Score = 44 (20.5 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 74 SSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLD 133
SSG K K+R+ T K+ F E K L D +Y P + +K D
Sbjct: 551 SSGLAKFTPFGGFGEKQRISTLLEKK------FKEELKTALPDRTVYYHPQMNDVVDKTD 604
Query: 134 ANQSRKSDK 142
++ R +K
Sbjct: 605 FSKLRFGEK 613
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 598 (215.6 bits), Expect = 5.9e-93, Sum P(2) = 5.9e-93
Identities = 140/370 (37%), Positives = 210/370 (56%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K K ET + + + +K ++ L +P + E E L +
Sbjct: 101 TV-KKKDGSET---AHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ G S L S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-GDSTL------------STVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL 392
VK +LED+L
Sbjct: 375 VKEMFLEDIL 384
Score = 367 (134.2 bits), Expect = 5.9e-93, Sum P(2) = 5.9e-93
Identities = 77/151 (50%), Positives = 105/151 (69%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP-- 585
++LL Y + + E +DL LI LL IC + GA+L+FLPG+++I RDR+L +
Sbjct: 589 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKR 648
Query: 586 FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
F T ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG+
Sbjct: 649 FADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGK 708
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
+KEKS+D N V+ L+ W+SKASA QR GR
Sbjct: 709 VKEKSFDALNFVTMLKMVWISKASAIQRKGR 739
Score = 206 (77.6 bits), Expect = 5.6e-76, Sum P(2) = 5.6e-76
Identities = 57/175 (32%), Positives = 93/175 (53%)
Query: 425 LDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLS 483
+D +S W + + D ++ L + NV +Y+H+ T T LMV AG+G V L+S
Sbjct: 469 MDACLSDIWLHKDIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQVEQLIS 528
Query: 484 LGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHM---------ENAL-----SD--SMK 527
+GA+ KA +G AL + Q E+ +++ + E++L SD +
Sbjct: 529 MGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSATLEFGNLDESSLVQTNGSDLSAED 588
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
++LL Y + + E +DL LI LL IC + GA+L+FLPG+++I RDR+L
Sbjct: 589 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRIL 643
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 550 (198.7 bits), Expect = 3.5e-90, Sum P(3) = 3.5e-90
Identities = 133/401 (33%), Positives = 212/401 (52%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
+DG+IL+FLPG +I+ T + + +KF+ +PLHS + S +QK +FK P G R
Sbjct: 819 QDGSILIFLPGVLEISSTIKEINKS----SDNKFMALPLHSGLTSAEQKSIFKTAPKGKR 874
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K+++STNIAET+ITI D V VID+G+ K +D N + L SW S+A +QR GRAGR
Sbjct: 875 KVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGR 934
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
AG CYHLY++ ++ +PEIKR +E L L VK + + N+ +FL LD P
Sbjct: 935 VTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGIS-NVNEFLSSGLDAPDK 993
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++ A L +IGAL + +T+LG + L P +K+L + CLD LTLA
Sbjct: 994 SSLDKANQFLHEIGALQ-ENSLTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAI 1052
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCS 859
S PF +K + KF GQ D +++ A+ + + K + F +
Sbjct: 1053 SSTGSPFINSYEQRDKLKQIQKKFG-----NGQGDFISMANAYNAYMSNKSKR----FLT 1103
Query: 860 QYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS-SCSHNARVPGIIHAVLMAGLYPMVA 918
+ ++S + + R Q + L++ GF+ + SC+ NA +I ++ YP VA
Sbjct: 1104 ENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVA 1163
Query: 919 RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP 959
R++ P ++ +++ G+ + + P + K K + P
Sbjct: 1164 RIQYPDP---KYFKSSSGS-IEIDPDARQIKFWIKSDGELP 1200
Score = 452 (164.2 bits), Expect = 3.5e-90, Sum P(3) = 3.5e-90
Identities = 104/263 (39%), Positives = 163/263 (61%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S +I + ES R D ++++ +RSKLP + ++ + + ++S QV LI+GETG
Sbjct: 542 ISDKDIELVKESYKKRKHSD-EFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGS 600
Query: 216 GKTTQVPQFLLEHIWSKGE-TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
GK+TQV QF+++ ++SKG+ T KI+CTQPRR+SA S+A+RIS ER + +G GY IR E
Sbjct: 601 GKSTQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGE 660
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+K ++ I F T GVLLR+L S N K+ + +I++DE+HER +D
Sbjct: 661 NKTSSNTRITFATTGVLLRMLQSS-------KKNGVLKN----IGYILIDEVHERSVDAD 709
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPV--IQVPGFTYPVKSFYLEDVL 392
F+L +++ M+ S P L++IL+SAT+ D F +F P+ + + G TYP++ FYL+
Sbjct: 710 FLLILLKKMIKSMPKLKIILLSATISVDTFINFFEK-PLTPLHIEGRTYPIQDFYLD--- 765
Query: 393 SILKSAESNHLDS-ASLIVPNED 414
SIL +E +S I P+ D
Sbjct: 766 SILAESEYKFQNSDGEFITPSAD 788
Score = 41 (19.5 bits), Expect = 3.5e-90, Sum P(3) = 3.5e-90
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1049 VVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKAL 1089
+V+D WL + + I LR + I K+++P+ L
Sbjct: 1316 IVIDNWLPIRTWCKNGVLIKHLRRLIDSVIDEKLSNPESPL 1356
Score = 40 (19.1 bits), Expect = 5.1e-47, Sum P(3) = 5.1e-47
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 217 KTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
K+T P +K + K V P +AT A +RG IGDN G+ +L
Sbjct: 9 KSTPEPTQTSASTNTKSKKKKDVTPTPST-TATQ-ATTPKPQRGLAIGDNFGWTGKL 63
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 550 (198.7 bits), Expect = 3.5e-90, Sum P(3) = 3.5e-90
Identities = 133/401 (33%), Positives = 212/401 (52%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
+DG+IL+FLPG +I+ T + + +KF+ +PLHS + S +QK +FK P G R
Sbjct: 819 QDGSILIFLPGVLEISSTIKEINKS----SDNKFMALPLHSGLTSAEQKSIFKTAPKGKR 874
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K+++STNIAET+ITI D V VID+G+ K +D N + L SW S+A +QR GRAGR
Sbjct: 875 KVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGR 934
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
AG CYHLY++ ++ +PEIKR +E L L VK + + N+ +FL LD P
Sbjct: 935 VTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGIS-NVNEFLSSGLDAPDK 993
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++ A L +IGAL + +T+LG + L P +K+L + CLD LTLA
Sbjct: 994 SSLDKANQFLHEIGALQ-ENSLTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAI 1052
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCS 859
S PF +K + KF GQ D +++ A+ + + K + F +
Sbjct: 1053 SSTGSPFINSYEQRDKLKQIQKKFG-----NGQGDFISMANAYNAYMSNKSKR----FLT 1103
Query: 860 QYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS-SCSHNARVPGIIHAVLMAGLYPMVA 918
+ ++S + + R Q + L++ GF+ + SC+ NA +I ++ YP VA
Sbjct: 1104 ENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVA 1163
Query: 919 RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP 959
R++ P ++ +++ G+ + + P + K K + P
Sbjct: 1164 RIQYPDP---KYFKSSSGS-IEIDPDARQIKFWIKSDGELP 1200
Score = 452 (164.2 bits), Expect = 3.5e-90, Sum P(3) = 3.5e-90
Identities = 104/263 (39%), Positives = 163/263 (61%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S +I + ES R D ++++ +RSKLP + ++ + + ++S QV LI+GETG
Sbjct: 542 ISDKDIELVKESYKKRKHSD-EFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGS 600
Query: 216 GKTTQVPQFLLEHIWSKGE-TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
GK+TQV QF+++ ++SKG+ T KI+CTQPRR+SA S+A+RIS ER + +G GY IR E
Sbjct: 601 GKSTQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGE 660
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+K ++ I F T GVLLR+L S N K+ + +I++DE+HER +D
Sbjct: 661 NKTSSNTRITFATTGVLLRMLQSS-------KKNGVLKN----IGYILIDEVHERSVDAD 709
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPV--IQVPGFTYPVKSFYLEDVL 392
F+L +++ M+ S P L++IL+SAT+ D F +F P+ + + G TYP++ FYL+
Sbjct: 710 FLLILLKKMIKSMPKLKIILLSATISVDTFINFFEK-PLTPLHIEGRTYPIQDFYLD--- 765
Query: 393 SILKSAESNHLDS-ASLIVPNED 414
SIL +E +S I P+ D
Sbjct: 766 SILAESEYKFQNSDGEFITPSAD 788
Score = 41 (19.5 bits), Expect = 3.5e-90, Sum P(3) = 3.5e-90
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1049 VVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKAL 1089
+V+D WL + + I LR + I K+++P+ L
Sbjct: 1316 IVIDNWLPIRTWCKNGVLIKHLRRLIDSVIDEKLSNPESPL 1356
Score = 40 (19.1 bits), Expect = 5.1e-47, Sum P(3) = 5.1e-47
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 217 KTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
K+T P +K + K V P +AT A +RG IGDN G+ +L
Sbjct: 9 KSTPEPTQTSASTNTKSKKKKDVTPTPST-TATQ-ATTPKPQRGLAIGDNFGWTGKL 63
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 531 (192.0 bits), Expect = 7.3e-88, Sum P(2) = 7.3e-88
Identities = 129/414 (31%), Positives = 224/414 (54%)
Query: 549 EQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQK 608
E + ++ + + G IL+FLPG +IN+ L R + ++PLH+ + + +Q+
Sbjct: 875 EAIDNELSLAQKSGGILIFLPGVAEINRACGML------RSLNCLHVLPLHASLETKEQR 928
Query: 609 KVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
KVF PP G RK++++TN+AET+ITIDD++ V+D+G++KE SYD NN+ L+ ++ S A
Sbjct: 929 KVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLA 988
Query: 669 SAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED 728
+ KQR GRAGR QAG CY LY++ + + + PE++R+P+E+LCL V+ + ++
Sbjct: 989 ACKQRRGRAGRVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQLCLSVRAMGI-ADVRG 1047
Query: 729 FLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMD 788
FL + PP + + AI +L+ +G L E++T LG +L + K++ + +
Sbjct: 1048 FLARAPTPPEAAAVEGAITMLRRMGCLD-GEELTALGRQLAAIPADLRCGKLMVYGAVFG 1106
Query: 789 CLDPALTLACA-SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK- 846
CL+ +++A S R F P P+++ +A A+ A+ G D L + AF+ W
Sbjct: 1107 CLEDCVSVAALLSSGRGVFVSP--PDKRDQAREARARFAA---GDGDLLTDLRAFQAWDA 1161
Query: 847 -----NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDV-------- 892
+ +QR + FC F+S ++ + R Q T L++ G + P D
Sbjct: 1162 MMRDPSVQQRHVRS-FCDDNFLSYLTLSDVASARTQYFTSLVELGLVRPGDAGYSNRGPP 1220
Query: 893 -SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
S+ A ++ A+ + P +AR++ P K +F + GA V + P +
Sbjct: 1221 PSTSEGGASSKYLLRALTASAFAPQIARIQYPDK---KFAASMSGA-VEIDPEA 1270
Score = 441 (160.3 bits), Expect = 7.3e-88, Sum P(2) = 7.3e-88
Identities = 115/306 (37%), Positives = 172/306 (56%)
Query: 140 SDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITS 199
S + R +R K + + A K E L R ++ R+++ +R KLP +D I
Sbjct: 587 STQIRARRKQRRPKNIVWNPDSASKNEWL--RRQETPEYRKMLGQRQKLPAWLLRDEIVR 644
Query: 200 TVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISV 257
TV +QV +I+GETG GK+TQ QF+L+ ++ +G I+ TQPRRISA +A+R+S
Sbjct: 645 TVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANILVTQPRRISALGLADRVSD 704
Query: 258 ERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA 317
ER +G +GY IR ES+ G + I F T GVLLR L G R+++ A DVS
Sbjct: 705 ERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSG-GRVEDVVASLA--DVS- 760
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF--GGCPV-- 373
H+++DE+HER +DF+L+IIRD+L L+L+LMSATLD+ F+ YF G V
Sbjct: 761 --HVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASYFVQDGIRVGQ 818
Query: 374 IQVPGFTYPVKSFYLEDVLSILKSAESN---HLDSASLIVPNEDPE----LTEENKSTLD 426
+++ G T+PV +YL+DV+ + + +N D + + N L E +D
Sbjct: 819 VEIAGRTFPVTDYYLDDVIRMTQFGTANIRADADPVAKAIQNLGTRINYNLLVETTEAID 878
Query: 427 EAISLA 432
+SLA
Sbjct: 879 NELSLA 884
Score = 37 (18.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 548 IEQLLRKICMDSEDGAIL 565
IE LLR+ C+ + G ++
Sbjct: 301 IESLLRRKCIWNPHGVVM 318
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 554 (200.1 bits), Expect = 7.8e-88, Sum P(3) = 7.8e-88
Identities = 143/391 (36%), Positives = 207/391 (52%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
V+P+ ID LI LL + + GA++V+LPG+ D+ RL ++ + II
Sbjct: 438 VHPD-IDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESS---LPREQITIIL 493
Query: 598 LHSMVPSVQQKKVFKRPPPGCR-KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
LHS V + +Q+KVF R PG R KIILSTNI +T+ITI D++YVID+G K K+YD +
Sbjct: 494 LHSQVDNSEQRKVF-RTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTID 552
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQ 716
S L +W+S+A AKQRAGRAGR G CY LY R A + + +PEI R ++E+CL
Sbjct: 553 ASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRTLDEICLL 612
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
KL P+ IE+FL LD P + + L+ +G L ++VT LG + L +
Sbjct: 613 TKLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQ 672
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
+ K L ++I + CLD + +A RDPF L I +K ++ A G SD L
Sbjct: 673 IGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAG--DGMSDSL 730
Query: 837 AVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN-GFIPEDVSSC 895
AVI +E + N K++ FC + F+ M M + L+ + + F
Sbjct: 731 AVIKLYEEFTNLKRK-DIGDFCERNFICRNAMEMFVSAASTLRDTVYRIFRFSEASARLA 789
Query: 896 SHNARVPGIIHAVLMAGLYPMVARLRPPHKN 926
S +I L AGLYP +A + +KN
Sbjct: 790 SSFNNDTNMIRLALTAGLYPKLAYMDRENKN 820
Score = 413 (150.4 bits), Expect = 7.8e-88, Sum P(3) = 7.8e-88
Identities = 121/367 (32%), Positives = 189/367 (51%)
Query: 32 ISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKR 91
+ Q++D FL S + L+ +R+ VH + + G+ + S G + R + + R
Sbjct: 69 LRQLVDDFLQSCEPEKQLPG-LTKAQRSHVHRLAQHRGLKTVSKGPEENRVLFI----SR 123
Query: 92 VETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIF 151
++D ++ + T KL D+ PP G+ + N R+ + G D+
Sbjct: 124 PQSDGQQQYILCNT-----KL---DIC---PPLLDVLGQ-MAGNVERRLMNSVG---DLK 168
Query: 152 CKPKMSK-----AEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQV 206
C + K + + + L + + N R I ER LPI ++ I + + +QV
Sbjct: 169 CNKQQYKDIRLPSNFGLVGQRLIPPPQSNRN-RNIQHERRSLPIYKQRESILNVLQRDQV 227
Query: 207 VLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDN 266
++I G TG GK+TQ+PQ++LE +IV +QPRRI+A SV+ERIS ERGE G
Sbjct: 228 LIIKGATGSGKSTQLPQYILEWAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTT 287
Query: 267 IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEI 326
+GY IR+ + ++ ++ T+G LLR L S K TH+I+DE
Sbjct: 288 VGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNT------------THLIIDEA 335
Query: 327 HERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSF 386
HERD +DF+L + L PHLRL+LMSAT+D + S YFGG V+ V G ++ V +
Sbjct: 336 HERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIY 395
Query: 387 YLEDVLS 393
+LED+LS
Sbjct: 396 HLEDILS 402
Score = 41 (19.5 bits), Expect = 7.8e-88, Sum P(3) = 7.8e-88
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRL 941
++ + H L++GL MVA G+RF+ A G+++ L
Sbjct: 863 QISSLEHTTLVSGL--MVALA-----GGKRFITEAHGSEMLL 897
Score = 40 (19.1 bits), Expect = 9.2e-49, Sum P(3) = 9.2e-49
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 502 GEQENQP-EVAQIIKKHMENALSDSMKQQLLDKYLATVNPE 541
G+Q+ +P + A+ + + M +QL+D +L + PE
Sbjct: 43 GKQKTRPGKNAKADAGDKLKSEDEKMLRQLVDDFLQSCEPE 83
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 668 (240.2 bits), Expect = 3.4e-81, Sum P(2) = 3.4e-81
Identities = 177/511 (34%), Positives = 291/511 (56%)
Query: 493 KDGRTALQLGEQENQPEVAQIIKKHMENALS--DSMKQQLLDKYLATVNPELIDLVLIEQ 550
+D R +L L +Q++ + + + L+ + + ++ K ++ ++ E ++L LIE
Sbjct: 99 EDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVI-KTMSIMDFEKVNLELIEA 157
Query: 551 LLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF--RDTSKFVIIPLHSMVPS 604
LL I +D + GAILVFLPG +I ++L +N F R +++ VI PLHS + S
Sbjct: 158 LLEWI-VDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSS 216
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK YD + +L+ ++
Sbjct: 217 EEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTF 276
Query: 665 VSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 723
VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+E+LCL++K+L+
Sbjct: 277 VSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMF 336
Query: 724 C--NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L L V + K++
Sbjct: 337 SAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLM 396
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR-ATAAKFELASLYGGQSDQLAVIA 840
F + CLDPALT+A + ++ PF +SP +KK A K E A SD LA++
Sbjct: 397 LFGSIFRCLDPALTIAASLAFKSPF---VSPWDKKEEANQKKLEFAF---ANSDYLALLQ 450
Query: 841 AFECWKNAKQRGQEAWF--CSQYFVSSGVMNMLLGMRKQLQTELIKN-GFIPEDVSSCSH 897
A++ W+ + + G A + C Q F+S V+ + +++Q TEL+ + GF E + +
Sbjct: 451 AYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDIGFAREGLRAREI 509
Query: 898 NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDD 957
R G G+ + + + A L+P+ + + F D
Sbjct: 510 EKRAQG------GDGVLDATGEEANSNAENPKLISAMLCAA--LYPNVVQVR-HF----D 556
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
P ++Y E + + +R+C++V PL+L
Sbjct: 557 SPYLLYHEKIK-TSRVFIRDCSMVSVYPLVL 586
Score = 183 (69.5 bits), Expect = 3.4e-81, Sum P(2) = 3.4e-81
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
DF+L +++D++ P L++ILMSATL+A+ FS YF CPVI +PG T+PV F+LED ++
Sbjct: 2 DFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIA 61
Query: 394 ILK 396
+ +
Sbjct: 62 VTR 64
Score = 39 (18.8 bits), Expect = 5.2e-66, Sum P(2) = 5.2e-66
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L+ IV +R L + + + + S+ T G+T V QF LE
Sbjct: 8 LKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLE 57
>UNIPROTKB|I3LCY3 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 GO:GO:0004386 GO:GO:0043330
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000023601 Uniprot:I3LCY3
Length = 987
Score = 740 (265.6 bits), Expect = 1.2e-78, Sum P(3) = 1.2e-78
Identities = 163/360 (45%), Positives = 227/360 (63%)
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
LPGW I + + F ++ +I HS + + +VFKR PPG RKI+++TNI
Sbjct: 469 LPGWLVILT----YMVSAFVKNRKFKIIFKYHSNLCYLNILQVFKRTPPGVRKIVIATNI 524
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET+ITIDDVVYVID G++KE +D NN+ST+ + WVSKA+AKQR GRAGR Q G CYH
Sbjct: 525 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYH 584
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L I FL + +DPP + + +I
Sbjct: 585 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLG-GIAYFLSRLMDPPSNEAVSLSIK 643
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L ++ AL E++T LG L L V P + KM+ F L CLDP LT+A + ++DPF
Sbjct: 644 HLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFV 703
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSS 865
+P+ ++K A A + ELA +SD L V+ AFE W+ A++RG E +C +YF+SS
Sbjct: 704 IPLG--KEKVADARRKELAK--DTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSS 759
Query: 866 GVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLR 921
+ ML M+ Q L+ GF+ P+D S + N+ II AV+ AGLYP VA++R
Sbjct: 760 NTLQMLHNMKGQFAEHLLGAGFVRSRNPKDPES-NINSDNEKIIKAVICAGLYPKVAKIR 818
Score = 55 (24.4 bits), Expect = 1.2e-78, Sum P(3) = 1.2e-78
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 1038 NVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHP 1085
++ D+ T+ VD W+ F S A + LR+ L + + K+ P
Sbjct: 897 SIQKDSDQE-TIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESP 943
Score = 48 (22.0 bits), Expect = 1.2e-78, Sum P(3) = 1.2e-78
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 333 SDFMLAIIRDMLPSYPHLRL--ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
SD + A + ++L Y L + + L+ F +G C ++ + Y V+ F L+
Sbjct: 323 SDVIKAFVNNLLFYYSSLIVPECIQFFLLNMIVFQLTYGNCSMLGFMQWLYSVEQFSLQG 382
Query: 391 VLS 393
V++
Sbjct: 383 VIA 385
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 489 (177.2 bits), Expect = 5.0e-78, Sum P(3) = 5.0e-78
Identities = 138/421 (32%), Positives = 220/421 (52%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
+N +L+ V +E + +++ +++G+I+VFLPG +INK + LLAN + + F+++P
Sbjct: 841 INYDLLCQV-VEYVHKRLKAANDNGSIIVFLPGVGEINKCCN-LLANK--SNEADFMVLP 896
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS + QK+VFK+ G RK+++STNIAET+ITIDD V ID+GR K Y+P +N
Sbjct: 897 LHSALTPEDQKRVFKKYH-GKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNT 955
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQ 716
+ L S++SKA KQR GRAGR + G+ Y L+S+ L + +PEIKRIP+E L L
Sbjct: 956 TKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLS 1015
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS-LDEKVTELGEKLGCLSVHP 775
VK + +++ FL LD P ++ A +L IG + D+ +T+LG+ + + V
Sbjct: 1016 VKAMGIK-DVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMD 1074
Query: 776 LM-SKMLFFAILMDCLDPALTLACASDYRD-PFTLPISPNEKKRATAAKFELASLYGGQS 833
K+L + IL C D ++ L PF EK + K+E +
Sbjct: 1075 SKHGKLLIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKIKKLLCKYE------SRG 1128
Query: 834 DQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED-- 891
D AV+ + K + + +S +N + Q + L GF+P D
Sbjct: 1129 DLFAVLEIVRDYFKIKDSSIKRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYK 1188
Query: 892 ---VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+S + N R I+ A+L YP +AR++ P +++ T+ GA V P +
Sbjct: 1189 VGSISDLNRNERNFDILRAILTGAFYPHIARVQLPDV---KYLSTSSGA-VEKDPEAKMI 1244
Query: 949 K 949
K
Sbjct: 1245 K 1245
Score = 399 (145.5 bits), Expect = 5.0e-78, Sum P(3) = 5.0e-78
Identities = 118/371 (31%), Positives = 189/371 (50%)
Query: 123 PDDGEPG--EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ 180
PD G K + + ++S R F K +S+ +++ E T RI K + +
Sbjct: 540 PDSDSKGAINKRNISNGKRSINNSSSRK--FTKTTISEDTLSVLREEYTKRI-KSSEYKS 596
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGE--TCK 237
+ R +LP + VI ++ N+VVLI+GETG GK+TQV QF+L+ + KG+ K
Sbjct: 597 MQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFGKTK 656
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
IVCTQPRRISA +AER+S ER G+ +GY IR +K + I F T GVL+RLL
Sbjct: 657 IVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLL-- 714
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
Q + E N T +++DE+HER +D ++ +++++L ++++LMSA
Sbjct: 715 QNARTMLE--N----------TIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSA 762
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL----KSAESNHLDSASLIVPNE 413
T++ D F ++F G + G T+P+ ++LED+LS L K ++ D S+ N
Sbjct: 763 TVNVDLFKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKREKALSYDDDSVDERNN 822
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMV-LAGK 472
D + K D + +D+L ++V V+ ++V L G
Sbjct: 823 DDQYL---KPRADSKFFTS-GQINYDLLCQVVEY-----VHKRLKAANDNGSIIVFLPGV 873
Query: 473 GRVGDVCMLLS 483
G + C LL+
Sbjct: 874 GEINKCCNLLA 884
Score = 44 (20.5 bits), Expect = 5.0e-78, Sum P(3) = 5.0e-78
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 1049 VVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKA 1088
+VVD WL + + I LR +L AI K+ P A
Sbjct: 1371 IVVDNWLPIRTWCKNGVLIKELRTQLDEAIRKKLESPDYA 1410
Score = 40 (19.1 bits), Expect = 1.8e-40, Sum P(3) = 1.8e-40
Identities = 11/53 (20%), Positives = 21/53 (39%)
Query: 389 EDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDML 441
++ L L+ + N ++A + P L + E S+ N E + L
Sbjct: 383 DEALLALQQNDMNENEAAGFLTREILPTLNSNTNEPVSETESIECWNQELESL 435
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 436 (158.5 bits), Expect = 3.1e-75, Sum P(4) = 3.1e-75
Identities = 100/260 (38%), Positives = 153/260 (58%)
Query: 135 NQSRKSDKTRGKRVDIFCKPKMSKA--EIAMKVESLTSRIEKDANLRQIVEERSKLPISS 192
+ KS T K+ + F KPK+ + E++ K+ + S K + + V ER KLP
Sbjct: 524 SSQNKSAPT-AKKNNSF-KPKLFRRSRELSEKLCNNWSERVKSPSYQLKVREREKLPAWE 581
Query: 193 FKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC--KIVCTQPRRISATS 250
+ I + +QVV+ISGETG GK+TQV QF+L+H S GE +VCTQPRRISA S
Sbjct: 582 SRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCTQPRRISAIS 641
Query: 251 VAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKP 310
+AER++ ER +G +GY + E K + + FCT G+LLR + G+ L
Sbjct: 642 LAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQQHGLGFL------- 694
Query: 311 AKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG 370
S L+ ++VDE+HER +D +L +++ ++ P+L++ILMSAT+++D F YFG
Sbjct: 695 -----STLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGN 749
Query: 371 CPVIQVPGFTYPVKSFYLED 390
+ + G T+P+K +Y+ED
Sbjct: 750 AGHLHIHGRTFPIKDYYIED 769
Score = 423 (154.0 bits), Expect = 3.1e-75, Sum P(4) = 3.1e-75
Identities = 105/277 (37%), Positives = 157/277 (56%)
Query: 543 IDLVLIEQLLRKICMD--SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
ID LI +L+ I + S G+ILVFLPG +I + + + +D SKF ++PLH+
Sbjct: 793 IDYHLISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKS----KDGSKFEVLPLHA 848
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ + +Q++ FK RKII +TNIAET+ITIDDVV VIDSGR+K+ YD ++ T
Sbjct: 849 SLNTSEQRRCFKTYTK--RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTF 906
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQV-- 717
+ +W S+A+ +QR GRAGR + GICY LY++ + PE+ R + ++CL V
Sbjct: 907 KETWASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVP 966
Query: 718 --KLLDPNCN------IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
K N I+ F+ +DPP T+ A+ L +GAL++ E +T LGE L
Sbjct: 967 LVKRFSSAGNSVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLV 1026
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPF 806
L + + K+L F + L+PALT+ + PF
Sbjct: 1027 SLPIDLKLGKLLVFGSIFGYLEPALTITAILSTKSPF 1063
Score = 55 (24.4 bits), Expect = 3.1e-75, Sum P(4) = 3.1e-75
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 941 LHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL-ATEIAVAP 997
+HP S F ++ C + Y++ +RNCT + ++LL A +I + P
Sbjct: 1209 IHPSSTMF-VNSPNASRCTFVAYEQKVETTKPF-LRNCTPINTYGMILLGANDILIDP 1264
Score = 40 (19.1 bits), Expect = 3.1e-75, Sum P(4) = 3.1e-75
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 70 MTSKSSGRGKQRRVSVCKSKKRVETDKGKE 99
M SK +GK V++ SK + + KGK+
Sbjct: 1 MGSKGK-KGKSSEVNLETSKNKEKNIKGKK 29
Score = 39 (18.8 bits), Expect = 6.0e-34, Sum P(4) = 6.0e-34
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 313 DDVSALTHIIVDEIHE-----RDR--Y--SDF--MLAIIRDMLPSYP-HLRLILMSAT 358
DDVSAL I+ +++ + R R Y S+F + R SYP H+ L+ +S+T
Sbjct: 405 DDVSALQSILDNKVSKIENGCRVRIDYPTSEFGELFVDFRRPARSYPAHIPLMSLSST 462
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 520 (188.1 bits), Expect = 5.7e-73, Sum P(3) = 5.7e-73
Identities = 165/531 (31%), Positives = 259/531 (48%)
Query: 505 ENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAI 564
E++P + I+ ++E S + D+ LA + + + L+ + I + G I
Sbjct: 818 EDKPFKSAAIQ-YLETETSSEW--DISDETLAERHAAYVPIDLVAATIAHIASSASPGDI 874
Query: 565 LVFLPGWEDINKTRDRL------LANPF----FRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
LVFLPG ++I D L L F F DTSKF I LHS V + +Q K+F++
Sbjct: 875 LVFLPGIKEIRSVNDVLRDRQGSLGIDFKDINFNDTSKFRIHFLHSAVSAAEQNKIFQKV 934
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
P GCR+IIL++NIAET++TI DVV+V+D G+ +++ YD ++ + + W +K+ A QR
Sbjct: 935 PLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDRKYDRSTRITGMYTGWQTKSKAMQRQ 994
Query: 675 GRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTL 734
GRAGR Q G Y LYS+ R S+ D +PE+ ++ + CL VK ++ DFL +
Sbjct: 995 GRAGRTQEGHYYGLYSEQRRQSMKDDALPEMLKLDLTNTCLSVKGFGFRDSVADFLAAAI 1054
Query: 735 DPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL 794
PP +++A+ L+ + AL+ +E +T LG L + +HPL+ KM+ + C+ P +
Sbjct: 1055 SPPPPSVVQDAVNSLKAMDALAENEGITSLGHLLLRIPLHPLLGKMILLGVFFRCVGPMI 1114
Query: 795 TLACASDYRDPFTLPI-SPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG- 852
L F +P SP+ KRA +F +A SD L+ + AF + +Q
Sbjct: 1115 VLCALHGGGSLFEVPPGSPSAAKRAHQ-QFRVAD-----SDHLSQMKAFNHLRQLEQISH 1168
Query: 853 QEAW-FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG-------- 903
+EA F ++ Q++ LI +G +P H PG
Sbjct: 1169 REAVDFARSEHLNFAKYEEAKLTAAQIEQVLINHGLVPPR-DELEHRFSSPGGVELNVNS 1227
Query: 904 ----IIHAVLMAGLYPMVAR--LRPPHKNGRRFVETAGGAKVRLHPHS------LNFKLS 951
++ A+L+ GLYP VA R P + + AGG+ L H+ N +L
Sbjct: 1228 GNEQLLKALLVKGLYPNVAVKVARSPTRMSLK--AAAGGSGHVLLGHASVVQPITNHEL- 1284
Query: 952 FKKTDDCPLMVYDEITRGD--GGMHVRNCT-VVGPLPLLLLATEIAVAPAP 999
F K L VY E+ R D M + N + + PL L L + + P P
Sbjct: 1285 FPKNS---LFVYSELVRQDYINLMFLTNVSHLESPLVLALFGGSL-LRPEP 1331
Score = 324 (119.1 bits), Expect = 5.7e-73, Sum P(3) = 5.7e-73
Identities = 81/301 (26%), Positives = 160/301 (53%)
Query: 130 EKLDANQSRKSDKTR-GKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKL 188
++L A+ R G R ++ P ++++ + ++ + + D +L I +R+ L
Sbjct: 527 QRLPASAVEHFHSNRPGARRSLWMHP-LARSSLNRRLAARLEAYQADRHLEHIRAQRASL 585
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCTQPRRI 246
P++ + + + V+ + ++ G TG GK+TQVPQ +L+ +G +I+C QPRR
Sbjct: 586 PMNKHRKQLLNLVEGSHFCIVIGATGSGKSTQVPQIILDDAIKQGRGADTRILCLQPRRA 645
Query: 247 SATSVAERISVERGENIGDNIGYKIRLESK--GGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
+A VA+R++ ERGE +G+++G++IR +++ + ++ F T G+LL+ L GV
Sbjct: 646 AAMWVAQRVASERGERLGESVGFRIRFDARLANRQGGTVSFVTLGILLKQL-QDGV---- 700
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR----DMLPSYPHL-RLILMSATL 359
++ + +HI++DE+HER D +L +++ + L L ++ILMSA++
Sbjct: 701 -------QETLDMYSHIVIDEVHERSLELDLLLVVLKKAIAERLAKGQSLPKIILMSASI 753
Query: 360 -DADRFSQYFG---------------GCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHL 403
+ ++ +Y CP++ +PG T+PV S YL+ +L +++ L
Sbjct: 754 SNQEQLQEYLADSLHDGKARRLPAHQACPILSIPGRTFPVSSIYLDRLLPMIRDKYGEQL 813
Query: 404 D 404
D
Sbjct: 814 D 814
Score = 42 (19.8 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 317 ALTHI--IVDEIHERDRYSDFMLAI 339
A+T I + D+ ERDRY M+ I
Sbjct: 288 AITDITDLCDKPDERDRYGPSMMKI 312
Score = 39 (18.8 bits), Expect = 2.7e-44, Sum P(2) = 2.7e-44
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 49 FDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSV 85
FDA L+NR+ V V +G+ K G Q + +
Sbjct: 672 FDARLANRQGGTVSFVT--LGILLKQLQDGVQETLDM 706
Score = 38 (18.4 bits), Expect = 5.7e-73, Sum P(3) = 5.7e-73
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 120 HYPPDDGEPGEKLDANQSRKSDKTRGK 146
H PP D P + A + + K + K
Sbjct: 131 HNPPADNPPADNPPAENPKAAHKEQIK 157
Score = 38 (18.4 bits), Expect = 8.7e-22, Sum P(3) = 8.7e-22
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 1120 ESLTSMIQATEIDKCPAARNRGTGQNPSNFLMSLMSP 1156
++L M++ + C + + G + ++FL + +SP
Sbjct: 1020 DALPEMLKLDLTNTCLSVKGFGFRDSVADFLAAAISP 1056
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 465 (168.7 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 119/350 (34%), Positives = 188/350 (53%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDT 590
L T PE +D LI L +I + +G ILVFL G E+I+ L ++
Sbjct: 697 LYTKQPETDYLDAALITVL--QIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNV 754
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPPG RK++++TNIAE ++TID + YV+D G K+
Sbjct: 755 PELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNV 814
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIP 709
Y+P + +L + +S+ASAKQRAGRAGR G CY LY++ + +P +PEI+RI
Sbjct: 815 YNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRIN 874
Query: 710 IEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
+ L +K + I D L +DPP + +A+ L +GAL + +T+LG K+
Sbjct: 875 LGMTTLTMKAM----GINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKM 930
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
+ P +SKML ++ + C D LT+ + F P +K+A A + + A
Sbjct: 931 AEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRP----REKQAQADQ-KRAKF 985
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
+ + D L ++A +E WK G W C + F+ S + +RKQL
Sbjct: 986 FQPEGDHLTLLAVYEAWKAKNFSGP--W-CFENFIQSRSLRRAQDVRKQL 1032
Score = 369 (135.0 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 88/231 (38%), Positives = 135/231 (58%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I E+R LPI K + V NQV+++ GETG GKTTQV Q+L E ++ KI C
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKG--KIGC 565
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR-LLVSQG 299
TQPRR++A SVA+R++ E G +G+ +GY IR E G + I + T+G+LLR +L+ +
Sbjct: 566 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 625
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+ I++DE HER ++D + +++ ++ LRLI+ SATL
Sbjct: 626 LSQYSV---------------IMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATL 670
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
DA++FS YF C + +PG T+PV+ Y K E+++LD+A + V
Sbjct: 671 DAEKFSGYFFNCNIFTIPGRTFPVEILYT-------KQPETDYLDAALITV 714
Score = 43 (20.2 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 164 KVESLTSRIEKDANLRQIVEERSK 187
KV+ L IE++A R+ E+R++
Sbjct: 106 KVKELEKEIEREAEERRREEDRNR 129
Score = 43 (20.2 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 76 GRGKQRRVSVCKSKKRVETDKGKEILPSL-TFSEGSKLVLQDL--FTHYPPDDGEPG-EK 131
G G+ RR + VE DKG P L +G + D F + G+ G
Sbjct: 185 GEGEDRRRDRRAKDEYVEEDKGGANEPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVH 244
Query: 132 LDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE--RSKLP 189
+ +R+ DK + F K M E+ +KV S++S + ++R + + R +P
Sbjct: 245 VSQMATRRVDKAKE-----FVKRDM---EVYVKVISISSD-KYSLSMRDVDQNTGRDLIP 295
Query: 190 ISSFKD 195
+ D
Sbjct: 296 LRKPSD 301
Score = 39 (18.8 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+ K + K KD V L I E ER R D
Sbjct: 94 KFKGLAIKDTKDKVKELEKEIEREAEERRREED 126
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 421 (153.3 bits), Expect = 3.7e-71, Sum P(2) = 3.7e-71
Identities = 110/358 (30%), Positives = 187/358 (52%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF--RDTSK 592
L T PE+ L + + +I + G ILVFL G E+I + + L + +
Sbjct: 522 LYTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSCEALHERMKLLGENIPE 581
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+I+P++S +PS Q ++F+ PPG RK+IL+TNIAET+ITID + YV+D G +K YD
Sbjct: 582 LIILPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYD 641
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ--LRAASLPDFQVPEIKRIPI 710
+ +L+ + +SKA A QR+GRAGR G CY LY++ +P+ +PEI+R +
Sbjct: 642 SKLGMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMIPN-TIPEIQRQNL 700
Query: 711 EELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
L +K + I D + + +DPP + T+ A+ L + AL D +T LG K+
Sbjct: 701 SHTILMLKAM----GIHDLVNFEFMDPPSTTTMLTALEDLYILDALDDDGNLTTLGRKMA 756
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + P ++K L ++ +C + L++ + F P + K+A A + + + +
Sbjct: 757 DLPMEPALAKTLIQSVEYECTEEILSIVAMLSVQTIFYRP----KDKQALADQRK-SRFH 811
Query: 830 GGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
D L ++ F+ W + + W C F+ M + +RKQL++ + + G+
Sbjct: 812 HSLGDHLTLLNVFQSW--CRNNYSKTW-CRDNFIQERSMRRAMEVRKQLKSIMQRFGY 866
Score = 391 (142.7 bits), Expect = 3.7e-71, Sum P(2) = 3.7e-71
Identities = 100/281 (35%), Positives = 156/281 (55%)
Query: 164 KVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQ 223
K + T K +L I E+R LP+ + + + + NQ V+I GETG GKTTQ+ Q
Sbjct: 313 KKSNKTETFGKRTSL-PIQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQ 371
Query: 224 FLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS 281
++ E +K G+T I CTQPRR++A SVA+R+S E G +GD +GY IR E +++
Sbjct: 372 YIYEEGMNKVGGQTKLIGCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENT 431
Query: 282 SIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR 341
I + T+G+L R EA N P + S I++DE HER +D + A+++
Sbjct: 432 VIKYMTDGMLER-----------EALNDPNMNRYSV---IMLDEAHERTIATDVLFALLK 477
Query: 342 DMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE----DVLSI-LK 396
+ P+L++I+ SATLD+++FS+YF CP+I +PG T+PV+ Y + D L+ L+
Sbjct: 478 NAAKQNPNLKVIVTSATLDSNKFSRYFNNCPIITIPGRTFPVEVLYTKAPEMDYLAAALE 537
Query: 397 SAESNHLD--SASLIVPNEDPELTEENKSTLDEAISLAWSN 435
S H+ + ++V E E + L E + L N
Sbjct: 538 SVIQIHVSEPAGDILVFLTGQEEIETSCEALHERMKLLGEN 578
Score = 47 (21.6 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 31/154 (20%), Positives = 61/154 (39%)
Query: 409 IVPNEDPELTEENKSTLDEAISLAWSNDEFDML-LELVSLEGSPNVYNYQHTLTGLTPLM 467
++PN PE+ +N L I + + D++ E + + + LT L L
Sbjct: 687 MIPNTIPEIQRQN---LSHTILMLKAMGIHDLVNFEFMDPPSTTTM------LTALEDLY 737
Query: 468 VLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENAL--SDS 525
+L G++ L AD ++ +T +Q E E E+ I+ +
Sbjct: 738 ILDALDDDGNLTTLGRKMADLPMEPALAKTLIQSVEYECTEEILSIVAMLSVQTIFYRPK 797
Query: 526 MKQQLLDKYLATVNPELIDLVLIEQLLRKICMDS 559
KQ L D+ + + L D + + + + C ++
Sbjct: 798 DKQALADQRKSRFHHSLGDHLTLLNVFQSWCRNN 831
Score = 43 (20.2 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 60 VVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFS-EGSKLVLQDLF 118
+ E K+G +K G + RRV+ KRV + G ++ ++ ++ + ++
Sbjct: 373 IYEEGMNKVGGQTKLIGCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTV 432
Query: 119 THYPPDDGEPGEKL-DANQSRKS 140
Y D E L D N +R S
Sbjct: 433 IKYMTDGMLEREALNDPNMNRYS 455
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 436 (158.5 bits), Expect = 5.4e-71, Sum P(2) = 5.4e-71
Identities = 135/447 (30%), Positives = 222/447 (49%)
Query: 511 AQIIKKHMENALSDSMKQQLLDKYLA-TVNPELIDLVLIEQLLRKICMDSEDGAILVFLP 569
AQ + + +NA ++ ++ + + T PE L + +I + G ILVFL
Sbjct: 639 AQKFQSYFDNAPIFNIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLT 698
Query: 570 GWEDINKTRDRL--LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
G E+I L A + +I P+++ +PS Q K+F+ PP RK++L+TNI
Sbjct: 699 GQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNI 758
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET++TID +VYVID G +KE ++P + +L + S+ASA QRAGRAGR G C+
Sbjct: 759 AETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFR 818
Query: 688 LYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIE-DFLQKTLDPPVSVTIRNA 745
LY++ + L + PEI+R + + L +K L + +E DF+ DPP + TI A
Sbjct: 819 LYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFM----DPPPAETIIRA 874
Query: 746 IIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDP 805
+ L +GAL+ ++T++G ++ P+++K + A C++ L++ S +
Sbjct: 875 LEQLYALGALNDRGELTKIGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIV--SMLGEA 932
Query: 806 FTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVS 864
L P +KK A +A+ GG D L ++ + W ++ W + F+
Sbjct: 933 SALFFRPKDKKIHADSARNRFTVKDGG--DHLTLLNIWNQWVDSDF--SYVW-AKENFLQ 987
Query: 865 SGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
+ +R QL +L + VSSC N VP I + AG +P ARL+
Sbjct: 988 QRSLTRARDVRDQL-AKLCDR--VEVTVSSCGSNNIVP--IQKAITAGFFPNAARLQ--- 1039
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFKLS 951
+ G + G V LHP S F+++
Sbjct: 1040 RGGDSYRTIKTGQTVYLHPSSTLFEVN 1066
Score = 376 (137.4 bits), Expect = 5.4e-71, Sum P(2) = 5.4e-71
Identities = 87/247 (35%), Positives = 137/247 (55%)
Query: 146 KRVDIFCKPKMSKAEIAMKVES--LTSRIEKDANLRQIVEE-RSKLPISSFKDVITSTVD 202
+R++ +M M E L ++++ Q +E+ R KLPI F+D I V
Sbjct: 436 QRINFTMDAQMKGTRKLMTQEQRMLQEKLDQAEQKAQTIEDTRKKLPIYQFRDQIIQAVH 495
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
+QV++I GETG GKTTQ+PQ+L E ++K K+ CTQPRR++A SVA R++ E G
Sbjct: 496 DHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGM-KVGCTQPRRVAAMSVAARVAEEMGVK 554
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
+G+ +GY IR E + + + T+G+LLR L+++ P SAL +
Sbjct: 555 LGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTE-----------PDLGQYSAL---M 600
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
+DE HER +D +++D+ + P L+L++ SAT+DA +F YF P+ +PG Y
Sbjct: 601 IDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNIPGRMYN 660
Query: 383 VKSFYLE 389
V Y +
Sbjct: 661 VDIHYTQ 667
Score = 42 (19.8 bits), Expect = 3.6e-35, Sum P(3) = 3.6e-35
Identities = 23/106 (21%), Positives = 44/106 (41%)
Query: 90 KRVET---DKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGK 146
+ VET D+G+ +G+ D + ++ E+ ++ R+S K R +
Sbjct: 120 RSVETERKDRGRRAHDKSRDGDGNSKSHSD---RWDKNENRKRERENSRDRRRSKKLRRR 176
Query: 147 RVDIFCKPKMSKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPIS 191
VD F + + EI + E + + + R +E+ S P S
Sbjct: 177 DVDDF-EDRWGDEEILEEEEQDVEGEFAESPSKRARLEDGSASPRS 221
Score = 41 (19.5 bits), Expect = 3.6e-35, Sum P(3) = 3.6e-35
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR-YSDFMLAIIRDMLPSYPH 349
L + L S+ R K+ KD +A + D+ RD D L ++ L
Sbjct: 248 LAKRLASKDDKRSKKIVEDRTKDSEAARRRALADDAKARDAAMPDLRLRSRQEYLKKRET 307
Query: 350 LRLILM 355
RL L+
Sbjct: 308 ERLALL 313
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 431 (156.8 bits), Expect = 1.5e-70, Sum P(2) = 1.5e-70
Identities = 133/422 (31%), Positives = 213/422 (50%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSED-GAILVFLPGWEDINKTRDRLLA--NPFFRDTSKF 593
T PE L + + +I M ED G +L+FL G E+I++ R+ + D
Sbjct: 298 TPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDI 357
Query: 594 VIIPLHSMVPSVQQKKVFKRPPP----GC--RKIILSTNIAETAITIDDVVYVIDSGRMK 647
IIPL+S +P QQ+++F+ PPP G RK+++STNIAET++TID VV+VID G K
Sbjct: 358 KIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 417
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIK 706
+K Y+P V +L + +SKASA+QRAGRAGR + G C+ LY++ + D PEI
Sbjct: 418 QKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEIL 477
Query: 707 RIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELG 765
R + + LQ+K L I+D + +DPP T+ A+ +L + AL+ D +TELG
Sbjct: 478 RSNLGSVVLQLKKL----GIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELG 533
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
+ + P ++KM+ + +C + L++ F P KK A +K
Sbjct: 534 SMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQCFVRPTEA--KKAADESKMRF 591
Query: 826 ASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
A + G D L ++ + +K + Q W C F++ + +R+QL + ++
Sbjct: 592 AHIDG---DHLTLLNVYHAFKQNHESVQ--W-CYDNFINYRSLMSADNVRQQL-SRIMDR 644
Query: 886 GFIPEDVSSCSHNARVPGI-IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPH 944
+P S +R I I L+ G + VA L + G ++ V+LHP
Sbjct: 645 FNLPR--RSTEFTSRDYYINIRRALVTGFFMQVAHLE---RTGH-YLTVKDNQVVQLHPS 698
Query: 945 SL 946
++
Sbjct: 699 TV 700
Score = 368 (134.6 bits), Expect = 1.5e-70, Sum P(2) = 1.5e-70
Identities = 97/309 (31%), Positives = 159/309 (51%)
Query: 90 KRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTR---GK 146
KR D G E S S K +D D + + D ++ R D+ R K
Sbjct: 3 KRHRLDLGDEYSSSKKRSSDGKDRDRDRDERSKDRDRDRDRERDRDRDRDRDRDRERDSK 62
Query: 147 RVDIFCKPKMSKAEIA-MKVESLTSRIEKDANLR------QIVEERSKLPISSFKDVITS 199
+S + I +K S+ +I NL +I+++R +LP+ +K+
Sbjct: 63 SSSAALSSSVSGSGILPLKQASMHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFND 122
Query: 200 TVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIVCTQPRRISATSVAERISVE 258
++ +Q ++ GETG GKTTQ+PQ+ ++ + S G + CTQPRR++A SVA+R++ E
Sbjct: 123 ILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVACTQPRRVAAMSVAQRVADE 182
Query: 259 RGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSAL 318
+G +GY IR E + + + T+G+LLR EA N P +
Sbjct: 183 MDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR-----------EAMNDPLLERYGV- 230
Query: 319 THIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPG 378
II+DE HER +D ++ ++++++ L++I+MSATLDA +F YF CP++ +PG
Sbjct: 231 --IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPG 288
Query: 379 FTYPVKSFY 387
T+PV+ FY
Sbjct: 289 RTHPVEIFY 297
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 408 (148.7 bits), Expect = 3.0e-70, Sum P(2) = 3.0e-70
Identities = 118/360 (32%), Positives = 181/360 (50%)
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSK-FVIIPLHSMVPSVQQKKVFKRPPPGCR 619
DG IL+F+PG EDI T + + D + ++P++S +PS Q K+F+R P G R
Sbjct: 650 DGDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMR 709
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K I++TNIAET++T+D +++VID G K K Y+P + L VS+ASA QR GRAGR
Sbjct: 710 KAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGR 769
Query: 680 CQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPP 737
G CY LY++ + L VPEI+R + + L +K L ++D L+ +D P
Sbjct: 770 TGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSL----GVDDLLKFHFMDAP 825
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
+ N++ L +GAL ++T +G K+ + P +SKML + M C D LT+
Sbjct: 826 PQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIV 885
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF 857
F P E+ A KF++ +SD L + + W+ K + W
Sbjct: 886 SMLSVPAIFFRPKGREEEADAKKEKFQVP-----ESDHLTFLNVYIQWRTHKYSAK--W- 937
Query: 858 CSQYFVSSGVMNMLLGMRKQLQT-------ELIKNGFIPEDVSSCS-----HNA-RVPGI 904
C+ ++ + + +R QL+ LI NG + V C HNA R+ GI
Sbjct: 938 CADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGI 997
Score = 398 (145.2 bits), Expect = 3.0e-70, Sum P(2) = 3.0e-70
Identities = 103/269 (38%), Positives = 158/269 (58%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ I ++R LP+ + + + + + N VV+I GETG GKTTQ+ Q+LLE + G++ I
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF--GDSGLI 489
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
CTQPRR++A SVA R++ E G ++G ++GY IR E + + I + T+G+LLR +
Sbjct: 490 GCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGD 549
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + D SA II+DE HER +D + ++R+++ L+LI+ SAT
Sbjct: 550 G-----------SLDQYSA---IIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSAT 595
Query: 359 LDADRFSQYFGG-CPVIQVPGFTYPVKSFY----LEDVL-SILKSAESNHL---DSASLI 409
+DAD+F+ +FGG CP +PG T+PV+ F+ +ED + + +K A + HL D LI
Sbjct: 596 MDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILI 655
Query: 410 -VPN-EDPELT----EENKSTLDEAISLA 432
+P ED E T +E LDEA LA
Sbjct: 656 FMPGQEDIECTCEMIKEKLGELDEAPPLA 684
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 408 (148.7 bits), Expect = 3.0e-70, Sum P(2) = 3.0e-70
Identities = 118/360 (32%), Positives = 181/360 (50%)
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSK-FVIIPLHSMVPSVQQKKVFKRPPPGCR 619
DG IL+F+PG EDI T + + D + ++P++S +PS Q K+F+R P G R
Sbjct: 650 DGDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMR 709
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K I++TNIAET++T+D +++VID G K K Y+P + L VS+ASA QR GRAGR
Sbjct: 710 KAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGR 769
Query: 680 CQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPP 737
G CY LY++ + L VPEI+R + + L +K L ++D L+ +D P
Sbjct: 770 TGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSL----GVDDLLKFHFMDAP 825
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
+ N++ L +GAL ++T +G K+ + P +SKML + M C D LT+
Sbjct: 826 PQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIV 885
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF 857
F P E+ A KF++ +SD L + + W+ K + W
Sbjct: 886 SMLSVPAIFFRPKGREEEADAKKEKFQVP-----ESDHLTFLNVYIQWRTHKYSAK--W- 937
Query: 858 CSQYFVSSGVMNMLLGMRKQLQT-------ELIKNGFIPEDVSSCS-----HNA-RVPGI 904
C+ ++ + + +R QL+ LI NG + V C HNA R+ GI
Sbjct: 938 CADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGI 997
Score = 398 (145.2 bits), Expect = 3.0e-70, Sum P(2) = 3.0e-70
Identities = 103/269 (38%), Positives = 158/269 (58%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ I ++R LP+ + + + + + N VV+I GETG GKTTQ+ Q+LLE + G++ I
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF--GDSGLI 489
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
CTQPRR++A SVA R++ E G ++G ++GY IR E + + I + T+G+LLR +
Sbjct: 490 GCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGD 549
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + D SA II+DE HER +D + ++R+++ L+LI+ SAT
Sbjct: 550 G-----------SLDQYSA---IIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSAT 595
Query: 359 LDADRFSQYFGG-CPVIQVPGFTYPVKSFY----LEDVL-SILKSAESNHL---DSASLI 409
+DAD+F+ +FGG CP +PG T+PV+ F+ +ED + + +K A + HL D LI
Sbjct: 596 MDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILI 655
Query: 410 -VPN-EDPELT----EENKSTLDEAISLA 432
+P ED E T +E LDEA LA
Sbjct: 656 FMPGQEDIECTCEMIKEKLGELDEAPPLA 684
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 429 (156.1 bits), Expect = 3.1e-70, Sum P(2) = 3.1e-70
Identities = 127/403 (31%), Positives = 207/403 (51%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLLA--NPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
+C + E+G +L+FL G E+I++ R+ + + IIPL+S +P QQ+++F+
Sbjct: 311 MC-EEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFE 369
Query: 613 RPPP----GC--RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
PPP G RK+++STNIAET++TID VV+VID G K+K Y+P V +L + +S
Sbjct: 370 PPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAIS 429
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
KASA+QRAGRAGR + G C+ LY++ + D PEI R + + LQ+K L
Sbjct: 430 KASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL----G 485
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I+D + +DPP T+ A+ +L + AL+ D +TELG + + P ++KM+ +
Sbjct: 486 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIAS 545
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+C + L++ F P KK A AK A + G D L ++ +
Sbjct: 546 CDYNCSNEVLSITAMLSVPQCFVRPTEA--KKAADEAKMRFAHIDG---DHLTLLNVYHA 600
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
+K + Q W C F++ + +R+QL + ++ +P S +R I
Sbjct: 601 FKQNHESVQ--W-CYDNFINYRSLMSADNVRQQL-SRIMDRFNLPR--RSTDFTSRDYYI 654
Query: 905 -IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
I L+ G + VA L + G ++ V+LHP ++
Sbjct: 655 NIRKALVTGYFMQVAHLE---RTGH-YLTVKDNQVVQLHPSTV 693
Score = 367 (134.2 bits), Expect = 3.1e-70, Sum P(2) = 3.1e-70
Identities = 81/235 (34%), Positives = 134/235 (57%)
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
P M A I + T+ + I+++R +LP+ +K+ T + +Q ++ GET
Sbjct: 71 PPMKPAMIPHSINPFTN-LPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGET 129
Query: 214 GCGKTTQVPQFLLEHIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
G GKTTQ+PQ+ ++++ S G + CTQPRR++A SVA+R++ E +G +GY IR
Sbjct: 130 GSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIR 189
Query: 273 LESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
E + + + T+G+LLR EA N P + II+DE HER
Sbjct: 190 FEDCSSAKTILKYMTDGMLLR-----------EAMNDPLLERYGV---IILDEAHERTLA 235
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
+D ++ ++++++ L++I+MSATLDA +F YF CP++ +PG T+PV+ FY
Sbjct: 236 TDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 290
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 430 (156.4 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 127/403 (31%), Positives = 207/403 (51%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
+C + E+G +L+FL G E+I++ R+ + + IIPL+S +P QQ+++F+
Sbjct: 344 MC-EEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFE 402
Query: 613 RPPP----GC--RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
PPP G RK+++STNIAET++TID VV+VID G K+K Y+P V +L + +S
Sbjct: 403 PPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAIS 462
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
KASA+QRAGRAGR + G C+ LY++ + D PEI R + + LQ+K L
Sbjct: 463 KASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL----G 518
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I+D + +DPP T+ A+ +L + AL+ D +TELG + + P ++KM+ +
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIAS 578
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+C + L++ F P KK A AK A + G D L ++ +
Sbjct: 579 CDYNCSNEVLSITAMLSVPQCFVRPTEA--KKAADEAKMRFAHIDG---DHLTLLNVYHA 633
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
+K + Q W C F++ + +R+QL + ++ +P S +R I
Sbjct: 634 FKQNHESVQ--W-CYDNFINYRSLMSADNVRQQL-SRIMDRFNLPR--RSTDFTSRDYYI 687
Query: 905 -IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
I L+ G + VA L + G ++ V+LHP ++
Sbjct: 688 NIRKALVTGYFMQVAHLE---RTGH-YLTVKDNQVVQLHPSTV 726
Score = 367 (134.2 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 78/208 (37%), Positives = 126/208 (60%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIV 239
I+++R +LP+ +KD T + +Q ++ GETG GKTTQ+PQ+ +E++ S G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E +G +GY IR E + + + T+G+LLR
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR------ 243
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
EA N P + II+DE HER +D ++ ++++++ L++I+MSATL
Sbjct: 244 -----EAMNDPLLERYGV---IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DA +F YF CP++ +PG T+PV+ FY
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 430 (156.4 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 127/403 (31%), Positives = 207/403 (51%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
+C + E+G +L+FL G E+I++ R+ + + IIPL+S +P QQ+++F+
Sbjct: 344 MC-EEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFE 402
Query: 613 RPPP----GC--RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
PPP G RK+++STNIAET++TID VV+VID G K+K Y+P V +L + +S
Sbjct: 403 PPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAIS 462
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
KASA+QRAGRAGR + G C+ LY++ + D PEI R + + LQ+K L
Sbjct: 463 KASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL----G 518
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I+D + +DPP T+ A+ +L + AL+ D +TELG + + P ++KM+ +
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIAS 578
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+C + L++ F P KK A AK A + G D L ++ +
Sbjct: 579 CDYNCSNEVLSITAMLSVPQCFVRPTEA--KKAADEAKMRFAHIDG---DHLTLLNVYHA 633
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
+K + Q W C F++ + +R+QL + ++ +P S +R I
Sbjct: 634 FKQNHESVQ--W-CYDNFINYRSLMSADNVRQQL-SRIMDRFNLPR--RSTDFTSRDYYI 687
Query: 905 -IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
I L+ G + VA L + G ++ V+LHP ++
Sbjct: 688 NIRKALVTGYFMQVAHLE---RTGH-YLTVKDNQVVQLHPSTV 726
Score = 367 (134.2 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 78/208 (37%), Positives = 126/208 (60%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIV 239
I+++R +LP+ +KD T + +Q ++ GETG GKTTQ+PQ+ +E++ S G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E +G +GY IR E + + + T+G+LLR
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR------ 243
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
EA N P + II+DE HER +D ++ ++++++ L++I+MSATL
Sbjct: 244 -----EAMNDPLLERYGV---IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DA +F YF CP++ +PG T+PV+ FY
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 430 (156.4 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 127/403 (31%), Positives = 207/403 (51%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
+C + E+G +L+FL G E+I++ R+ + + IIPL+S +P QQ+++F+
Sbjct: 344 MC-EEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFE 402
Query: 613 RPPP----GC--RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
PPP G RK+++STNIAET++TID VV+VID G K+K Y+P V +L + +S
Sbjct: 403 PPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAIS 462
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
KASA+QRAGRAGR + G C+ LY++ + D PEI R + + LQ+K L
Sbjct: 463 KASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL----G 518
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I+D + +DPP T+ A+ +L + AL+ D +TELG + + P ++KM+ +
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIAS 578
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+C + L++ F P KK A AK A + G D L ++ +
Sbjct: 579 CDYNCSNEVLSITAMLSVPQCFVRPTEA--KKAADEAKMRFAHIDG---DHLTLLNVYHA 633
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
+K + Q W C F++ + +R+QL + ++ +P S +R I
Sbjct: 634 FKQNHESVQ--W-CYDNFINYRSLMSADNVRQQL-SRIMDRFNLPR--RSTDFTSRDYYI 687
Query: 905 -IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
I L+ G + VA L + G ++ V+LHP ++
Sbjct: 688 NIRKALVTGYFMQVAHLE---RTGH-YLTVKDNQVVQLHPSTV 726
Score = 367 (134.2 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 78/208 (37%), Positives = 126/208 (60%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIV 239
I+++R +LP+ +KD T + +Q ++ GETG GKTTQ+PQ+ +E++ S G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E +G +GY IR E + + + T+G+LLR
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR------ 243
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
EA N P + II+DE HER +D ++ ++++++ L++I+MSATL
Sbjct: 244 -----EAMNDPLLERYGV---IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DA +F YF CP++ +PG T+PV+ FY
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 430 (156.4 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 127/403 (31%), Positives = 207/403 (51%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
+C + E+G +L+FL G E+I++ R+ + + IIPL+S +P QQ+++F+
Sbjct: 344 MC-EEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFE 402
Query: 613 RPPP----GC--RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
PPP G RK+++STNIAET++TID VV+VID G K+K Y+P V +L + +S
Sbjct: 403 PPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAIS 462
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
KASA+QRAGRAGR + G C+ LY++ + D PEI R + + LQ+K L
Sbjct: 463 KASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL----G 518
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I+D + +DPP T+ A+ +L + AL+ D +TELG + + P ++KM+ +
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIAS 578
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+C + L++ F P KK A AK A + G D L ++ +
Sbjct: 579 CDYNCSNEVLSITAMLSVPQCFVRPTEA--KKAADEAKMRFAHIDG---DHLTLLNVYHA 633
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
+K + Q W C F++ + +R+QL + ++ +P S +R I
Sbjct: 634 FKQNHESVQ--W-CYDNFINYRSLMSADNVRQQL-SRIMDRFNLPR--RSTDFTSRDYYI 687
Query: 905 -IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
I L+ G + VA L + G ++ V+LHP ++
Sbjct: 688 NIRKALVTGYFMQVAHLE---RTGH-YLTVKDNQVVQLHPSTV 726
Score = 367 (134.2 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 78/208 (37%), Positives = 126/208 (60%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIV 239
I+++R +LP+ +KD T + +Q ++ GETG GKTTQ+PQ+ +E++ S G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E +G +GY IR E + + + T+G+LLR
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR------ 243
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
EA N P + II+DE HER +D ++ ++++++ L++I+MSATL
Sbjct: 244 -----EAMNDPLLERYGV---IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DA +F YF CP++ +PG T+PV+ FY
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 430 (156.4 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 127/403 (31%), Positives = 207/403 (51%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
+C + E+G +L+FL G E+I++ R+ + + IIPL+S +P QQ+++F+
Sbjct: 344 MC-EEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFE 402
Query: 613 RPPP----GC--RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
PPP G RK+++STNIAET++TID VV+VID G K+K Y+P V +L + +S
Sbjct: 403 PPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAIS 462
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
KASA+QRAGRAGR + G C+ LY++ + D PEI R + + LQ+K L
Sbjct: 463 KASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL----G 518
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I+D + +DPP T+ A+ +L + AL+ D +TELG + + P ++KM+ +
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIAS 578
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+C + L++ F P KK A AK A + G D L ++ +
Sbjct: 579 CDYNCSNEVLSITAMLSVPQCFVRPTEA--KKAADEAKMRFAHIDG---DHLTLLNVYHA 633
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
+K + Q W C F++ + +R+QL + ++ +P S +R I
Sbjct: 634 FKQNHESVQ--W-CYDNFINYRSLMSADNVRQQL-SRIMDRFNLPR--RSTDFTSRDYYI 687
Query: 905 -IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
I L+ G + VA L + G ++ V+LHP ++
Sbjct: 688 NIRKALVTGYFMQVAHLE---RTGH-YLTVKDNQVVQLHPSTV 726
Score = 367 (134.2 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 78/208 (37%), Positives = 126/208 (60%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIV 239
I+++R +LP+ +KD T + +Q ++ GETG GKTTQ+PQ+ +E++ S G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E +G +GY IR E + + + T+G+LLR
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR------ 243
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
EA N P + II+DE HER +D ++ ++++++ L++I+MSATL
Sbjct: 244 -----EAMNDPLLERYGV---IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DA +F YF CP++ +PG T+PV+ FY
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 430 (156.4 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 127/403 (31%), Positives = 207/403 (51%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
+C + E+G +L+FL G E+I++ R+ + + IIPL+S +P QQ+++F+
Sbjct: 344 MC-EEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFE 402
Query: 613 RPPP----GC--RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
PPP G RK+++STNIAET++TID VV+VID G K+K Y+P V +L + +S
Sbjct: 403 PPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAIS 462
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
KASA+QRAGRAGR + G C+ LY++ + D PEI R + + LQ+K L
Sbjct: 463 KASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL----G 518
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I+D + +DPP T+ A+ +L + AL+ D +TELG + + P ++KM+ +
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIAS 578
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+C + L++ F P KK A AK A + G D L ++ +
Sbjct: 579 CDYNCSNEVLSITAMLSVPQCFVRPTEA--KKAADEAKMRFAHIDG---DHLTLLNVYHA 633
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
+K + Q W C F++ + +R+QL + ++ +P S +R I
Sbjct: 634 FKQNHESVQ--W-CYDNFINYRSLMSADNVRQQL-SRIMDRFNLPR--RSTDFTSRDYYI 687
Query: 905 -IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
I L+ G + VA L + G ++ V+LHP ++
Sbjct: 688 NIRKALVTGYFMQVAHLE---RTGH-YLTVKDNQVVQLHPSTV 726
Score = 367 (134.2 bits), Expect = 3.4e-70, Sum P(2) = 3.4e-70
Identities = 78/208 (37%), Positives = 126/208 (60%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIV 239
I+++R +LP+ +KD T + +Q ++ GETG GKTTQ+PQ+ +E++ S G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E +G +GY IR E + + + T+G+LLR
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR------ 243
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
EA N P + II+DE HER +D ++ ++++++ L++I+MSATL
Sbjct: 244 -----EAMNDPLLERYGV---IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DA +F YF CP++ +PG T+PV+ FY
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 404 (147.3 bits), Expect = 4.5e-70, Sum P(2) = 4.5e-70
Identities = 134/423 (31%), Positives = 209/423 (49%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL---LANPFFRDTSKF 593
T PE L + + +I M G ILVFL G E+I ++ ++N
Sbjct: 255 TQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSN-LGDQVGPV 313
Query: 594 VIIPLHSMVPSVQQKKVFKRPP-------PGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
++PL+S +P Q+K+F P P RKI++STNIAET++TID +VYVID G
Sbjct: 314 KVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEI 705
K+K Y+P V +L S +SKASA QR+GRAGR + G C+ LY++ + L PEI
Sbjct: 374 KQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEI 433
Query: 706 KRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R + L +K L I+D + +DPP T+ A+ VL +GAL + +T+
Sbjct: 434 LRSNLANTVLTLKKL----GIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKT 489
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNE-KKRATAAKF 823
GE + + P MSKML + +C + L+++ + F + P E +K A AK
Sbjct: 490 GEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCF---VRPREAQKAADEAKA 546
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
+ G D L ++ + +K Q ++ +C + FV++ M +R+QL I
Sbjct: 547 RFGHIDG---DHLTLLNVYHAYK---QNNEDPNWCFENFVNNRAMKSADNVRQQLVR--I 598
Query: 884 KNGFIPEDVSSCS--HNARVPGI-IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR 940
+ F ++ CS N+R + I ++AG + VA L + G ++ V
Sbjct: 599 MSRF---NLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLE---RTGH-YLTVKDNQVVH 651
Query: 941 LHP 943
LHP
Sbjct: 652 LHP 654
Score = 391 (142.7 bits), Expect = 4.5e-70, Sum P(2) = 4.5e-70
Identities = 82/215 (38%), Positives = 135/215 (62%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS----KGET 235
+I+E+R LP+ KD +T++SNQ +++ GETG GKTTQ+PQF+L+ + + KG
Sbjct: 57 EILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRK 116
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
+ CTQPRR++A SV+ R++ E +IG+ +GY IR E + + + T+G+LLR
Sbjct: 117 WLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLR-- 174
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
EA P + II+DE HER +D + +++++L + P L+L++M
Sbjct: 175 ---------EAMADPLLERYKV---IILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVM 222
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
SATL+A++F +YF G P+++VPG +PV+ FY ++
Sbjct: 223 SATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQE 257
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 409 (149.0 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 121/373 (32%), Positives = 191/373 (51%)
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVF 611
+I + G +LVFL G E+I + L S+ +++P+++ +PS Q K+F
Sbjct: 614 QIHVTQSPGDVLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIF 673
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
PPG RK++++TNIAET++TID ++YVID G K+KSY+ + +L + S+ASA
Sbjct: 674 NPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASAN 733
Query: 672 QRAGRAGRCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE-DF 729
QRAGRAGR AG C+ LY+ + + VPEI+R + + L +K L N I DF
Sbjct: 734 QRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDF 793
Query: 730 LQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDC 789
+ DPP T+ A+ L +GAL+ ++T+LG ++ L V P++SKM+ + C
Sbjct: 794 M----DPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKC 849
Query: 790 LDPALTLACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNA 848
+ LT+A + ++ P +K A A+ + GG D L ++ + W +
Sbjct: 850 SEEVLTIAAMLSVNN--SIFYRPKDKVVHADNARMNFV-VPGG--DHLVLLNVYTQWVES 904
Query: 849 KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE-DVSSCSHNARVPGIIHA 907
G +C + F+ M +R QL+ G + +V CS N I A
Sbjct: 905 ---GYSTQWCFENFIQFRSMKRARDVRDQLE------GLMDRIEVELCSSNGDSMPIRKA 955
Query: 908 VLMAGLYPMVARL 920
V AG + ARL
Sbjct: 956 VT-AGYFYHTARL 967
Score = 393 (143.4 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 110/362 (30%), Positives = 185/362 (51%)
Query: 43 KDEVYTFDA-NLSNRERAVVH--EVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKE 99
KDE Y F NL++RER + + M K +G +Q K++ + +K +
Sbjct: 253 KDEEYLFSTQNLTDRERKDLEYKRTIRDMAKEYKKAGAKEQEER---KNRYYMPEEKRNK 309
Query: 100 ILPS----LTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSD-KTRGKRVDIFCKP 154
+P L F E + + + A Q R+ K +R + +
Sbjct: 310 SIPQKDMDLEFEETPREGGGEQGRWEEARVATATLQFGARQERERRIKEEQERYQLILEE 369
Query: 155 K--MSKAEIAMKVESLTSRIEKDANLRQ-------IVEERSKLPISSFKDVITSTVDSNQ 205
+ ++ A+ ++ S E + L Q I E R LPI +++ + + + +Q
Sbjct: 370 EEMITFVSTAITMKGTLSEKESEPELSQAEKQKQSIQEVRRSLPIFPYREDLLAAIGDHQ 429
Query: 206 VVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGD 265
+++I GETG GKTTQ+PQ+LLE ++KG KI CTQPRR++A SVA R++ E +G+
Sbjct: 430 ILVIEGETGSGKTTQIPQYLLEEGYTKGGM-KIGCTQPRRVAAMSVAARVAQEMSVKLGN 488
Query: 266 NIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDE 325
+GY IR E + + + + T+G+LLR E +P D+++ + II+DE
Sbjct: 489 EVGYSIRFEDCTSERTILKYMTDGMLLR-----------EFLTEP---DLASYSVIIIDE 534
Query: 326 IHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKS 385
HER ++D + +I+D+ P L++++ SATLD +RFS +F PV ++PG +PV
Sbjct: 535 AHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDI 594
Query: 386 FY 387
+Y
Sbjct: 595 YY 596
Score = 39 (18.8 bits), Expect = 7.3e-32, Sum P(3) = 7.3e-32
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 87 KSKKRVETDKGKE 99
K KK E DKGK+
Sbjct: 112 KEKKSKERDKGKK 124
Score = 39 (18.8 bits), Expect = 7.3e-32, Sum P(3) = 7.3e-32
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 501 LGEQENQPEVAQIIKK 516
L E+E++PE++Q K+
Sbjct: 386 LSEKESEPELSQAEKQ 401
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 427 (155.4 bits), Expect = 6.1e-70, Sum P(2) = 6.1e-70
Identities = 120/345 (34%), Positives = 174/345 (50%)
Query: 548 IEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRL------LANPFFRDTSKFVIIP 597
IE L K+ +D +G IL+F+ G +DI K RL LA D +I P
Sbjct: 197 IESSL-KVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDA---IIYP 252
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LH +P Q +VF PPP CR+ I+STNIAET++T+D VVYVIDSG +K++ Y+P + +
Sbjct: 253 LHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGM 312
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYS-QLRAASLPDFQVPEIKRIPIEELCLQ 716
+L +SK A QRAGRAGR + G CY LY + D +PEI+R + L
Sbjct: 313 FSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLY 372
Query: 717 VKLLD-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
+K LD P+ +I F LD P S ++ +A+ L I A+ + +T +G + L + P
Sbjct: 373 LKSLDLPDIDILKF--DFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEP 430
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPI--SPNEKKRATAAKFELASLYGGQS 833
+S+ L A CL ALT+ + LP P+EKKR L + G
Sbjct: 431 SLSRTLIEANETGCLSQALTVVAMLS-AETTLLPARSKPSEKKRKHDEDSNLPN-GSGYG 488
Query: 834 DQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
D + ++ FE W W C + + M + +R+QL
Sbjct: 489 DHIQLLQIFESWDRTNY--DPVW-CKENGMQVRGMVFVKDVRRQL 530
Score = 363 (132.8 bits), Expect = 6.1e-70, Sum P(2) = 6.1e-70
Identities = 92/256 (35%), Positives = 145/256 (56%)
Query: 186 SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRR 245
+ LPI F++ I TV+ N VV+I GETG GK+TQ+ Q L H ++K I TQPRR
Sbjct: 2 ANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGV--IAITQPRR 59
Query: 246 ISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKE 305
++A SVA R++ E +G+++GY IR E + + I + T+GVLLR E
Sbjct: 60 VAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLR-----------E 108
Query: 306 ASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP-SYPHLRLILMSATLDADRF 364
+ + P DD S II+DE HER +D +L +++ ++ + ++++ SATLD ++
Sbjct: 109 SLSNPMLDDYSV---IILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKV 165
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLED-----VLSILKSAESNHL--DSASLIVPNEDPEL 417
S++F GCPV+ VPG YPV+ Y ++ + S LK A H+ +++ +
Sbjct: 166 SEFFSGCPVLNVPGKLYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDD 225
Query: 418 TEENKSTLDEAI-SLA 432
E+ S L+E + SLA
Sbjct: 226 IEKLVSRLEEKVRSLA 241
Score = 46 (21.3 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 888 IPEDVSSCSHNARVPGIIHAVLMAGLYP-MVARL-RPPHKNGRRFVETAGGAKVRL 941
+ E V S + + + II+ L L P M R+ PP N RRF+ + A+ L
Sbjct: 233 LEEKVRSLAEGSCMDAIIYP-LHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSL 287
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 420 (152.9 bits), Expect = 6.3e-70, Sum P(2) = 6.3e-70
Identities = 117/387 (30%), Positives = 194/387 (50%)
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS--KFVIIPL 598
+ +D LI + +I + G +L+FL G E+I+ + L S + VI+P+
Sbjct: 767 DYLDAALITVM--QIHLTEPPGDMLLFLTGQEEIDTACEILYERMKALGPSVPELVILPV 824
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
+S +PS Q ++F PPG RK++++TNIAET+ITID++ YVID G +K+K+YDP +
Sbjct: 825 YSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMD 884
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS--LPDFQVPEIKRIPIEELCLQ 716
+L + +S+A AKQRAGRAGR G C+ LY++ S LP +P+I+R + L
Sbjct: 885 SLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSEMLPT-TIPDIQRQNLSHTILM 943
Query: 717 VKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
+K + I D L +DPP + T+ A+ L + AL + +T LG K+ + P
Sbjct: 944 LKAM----GINDLLHFDFMDPPPTNTMLTALEELYALSALDDEGLLTRLGRKMADFPMEP 999
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
++K+L ++ M C + L++ + F P EK++ K A + D
Sbjct: 1000 ALAKVLIASVDMGCSEEMLSIVAMLSIQSVF---YRPKEKQQQADQK--KAKFHDPHGDH 1054
Query: 836 LAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC 895
L ++ + WK + AW C + F+ + + +R+QL + + + SC
Sbjct: 1055 LTLLNVYNAWK--RSGFSNAW-CYENFIQARQIRRAQDVRQQLLGIMQR---YHHKIVSC 1108
Query: 896 SHNARVPGIIHAVLMAGLYPMVARLRP 922
N + L G + AR P
Sbjct: 1109 GRNTTK---VRQALCTGFFRNSARKDP 1132
Score = 384 (140.2 bits), Expect = 6.3e-70, Sum P(2) = 6.3e-70
Identities = 89/230 (38%), Positives = 132/230 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I ++R LP+ F+ + V NQ++++ G+TG GKTTQV Q+L E W+ I C
Sbjct: 570 IKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKGI--IGC 627
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R++ E G +G +GY IR E + I + T+G+L R
Sbjct: 628 TQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQR------- 680
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D+ + I++DE HER +D + +++ L P LRLI+ SATLD
Sbjct: 681 ----EVLLDP---DLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLD 733
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
AD+FS+YF GCP+ +PG T+PV+ Y K ES++LD+A + V
Sbjct: 734 ADKFSEYFYGCPIFSIPGRTFPVEIMYS-------KEPESDYLDAALITV 776
Score = 47 (21.6 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 643 SGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
S R K + P +N + W + SA++R GR G
Sbjct: 1202 SKRKKAERIQPLHNRFAGEDDW--RLSAQRRQGRGG 1235
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 411 (149.7 bits), Expect = 7.1e-70, Sum P(2) = 7.1e-70
Identities = 103/303 (33%), Positives = 158/303 (52%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G++LVFLPG +I ++ L + R + + PLHS V +Q VF P PG R
Sbjct: 345 ERGSVLVFLPGLAEIQYMKEAL--SKLVR--KRLQVYPLHSTVTLEEQNGVFLVPVPGYR 400
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
KIILSTNIAE+++T+ DV YVID +++ + D N L+ +W SK S QR GRAGR
Sbjct: 401 KIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGR 460
Query: 680 CQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
G CY L ++ +P+F +PE+ R P+ L+VKLLD + L L PP+
Sbjct: 461 VSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMG-DPRSVLSTALTPPI 519
Query: 739 SVTIRNAIIVLQDIGALSL--------DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
I ++ L+ IGALS+ D +T LG L L V + K++ + CL
Sbjct: 520 LGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCL 579
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
+ L +A + + F +P ++ + +L+ SD +A + AF+ W ++
Sbjct: 580 EECLIIAASLSLKSFFAMP----SLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAWYTSRA 635
Query: 851 RGQ 853
+G+
Sbjct: 636 KGE 638
Score = 394 (143.8 bits), Expect = 7.1e-70, Sum P(2) = 7.1e-70
Identities = 98/261 (37%), Positives = 153/261 (58%)
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPI+ + + S +++N VV+I G TG GKTTQ+PQF+L+H + C +V TQPR+I
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHYAERNIPCNLVVTQPRKIG 148
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
ATS+A ++ ER +G +GY++ LE +H+ +++ T GVLL+ LVS L E S
Sbjct: 149 ATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSS--KTLTEYS 206
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP-HLRLILMSATLDADRFSQ 366
HI +DE+HER DF+L ++R +L S ++++ILMSAT++ F++
Sbjct: 207 ------------HIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAE 254
Query: 367 YFGGC------P--VIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELT 418
YFG P V +V G Y V+ +YL+++ ++L + LD L +P +DP +T
Sbjct: 255 YFGSPIRNQMNPAYVFEVEGAPYAVEEYYLDELKTMLPVGVN--LD---LTLP-QDPYIT 308
Query: 419 EENKSTLDEAISLAWSNDEFD 439
EE + A+SL S DE +
Sbjct: 309 EEMYNV---AVSLIQSFDEME 326
Score = 38 (18.4 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 555 ICMDSEDGAILVFLPGWEDI 574
+ ++ ++G LV +PG+ I
Sbjct: 383 VTLEEQNGVFLVPVPGYRKI 402
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 436 (158.5 bits), Expect = 9.0e-70, Sum P(2) = 9.0e-70
Identities = 123/395 (31%), Positives = 201/395 (50%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 695 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 752
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 753 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 812
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 813 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 871
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 872 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 927
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P + K+A A + + A
Sbjct: 928 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP----KDKQALADQ-KKAK 982
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 983 FHQTEGDHLTLLAVYNSWKNNKF--SNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1039
Query: 888 IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRP 922
DV SC A V + + +G + A+ P
Sbjct: 1040 ---DVVSCG-KATVR--VQKAICSGFFRNAAKKDP 1068
Score = 365 (133.5 bits), Expect = 9.0e-70, Sum P(2) = 9.0e-70
Identities = 89/229 (38%), Positives = 132/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 506 IIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG--KIGC 563
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 564 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------- 616
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D++ I++DE HER ++D + +++ + ++LI+ SATLD
Sbjct: 617 ----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD 669
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 670 AVKFSQYFYEAPIFTIPGRTYPVEILYT-------KEPETDYLD-ASLI 710
Score = 51 (23.0 bits), Expect = 7.6e-37, Sum P(3) = 7.6e-37
Identities = 24/102 (23%), Positives = 50/102 (49%)
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD---GRTALQLGE--QENQPEVAQIIKK 516
GL + L +GRV +V ++S G ++K +T+L + + Q+ ++ ++
Sbjct: 273 GLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRR 332
Query: 517 HMENALSD--SMKQQLLDKYLATVN-PELIDLVLIEQLLRKI 555
++ ++ SM+ +L+ VN PE+ D L + L +I
Sbjct: 333 NLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTLERKRLTRI 374
Score = 49 (22.3 bits), Expect = 7.6e-37, Sum P(3) = 7.6e-37
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 388 LEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSL 447
+ D+ ++ + A+ +L S + D L +K + ISLA N FD ++
Sbjct: 6 MADLAALEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKAVLIK 65
Query: 448 EGS 450
G+
Sbjct: 66 NGA 68
Score = 43 (20.2 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A R S+ FG C + Q G+T + + +++K L LI DP+LT+
Sbjct: 575 AKRVSEEFGCC-LGQEVGYTIRFEDCTSPE--TVIKYMTDGMLLRECLI----DPDLTQY 627
Query: 421 NKSTLDEA 428
LDEA
Sbjct: 628 AIIMLDEA 635
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 413 (150.4 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 112/377 (29%), Positives = 190/377 (50%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQ 606
++Q L+ + + G IL+F+PG EDI T D+++ + + ++P++S +PS
Sbjct: 267 VKQSLQ-VHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDL 325
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F++ P G RK I++TNIAET++T+D +++VIDSG K K ++P + LQ +S
Sbjct: 326 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 385
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
+A+A QR+GRAGR G C+ LY+Q + L VPEI+R + + L +K L
Sbjct: 386 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL----G 441
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
++D LQ +DPP + N++ L +GAL +T G + + P +SKML +
Sbjct: 442 VQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 501
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
M C L + F P E+ KF + +SD L + +
Sbjct: 502 CDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVP-----ESDHLTYLNVYLQ 556
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
WKN W C+ +F+ + M + +R QL+ +++ ++SC + I
Sbjct: 557 WKNNNY--STIW-CNDHFIHAKAMRKVREVRAQLKDIMVQQRM---SLASCGTDW---DI 607
Query: 905 IHAVLMAGLYPMVARLR 921
+ + A + A+L+
Sbjct: 608 VRKCICAAYFHQAAKLK 624
Score = 379 (138.5 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 98/271 (36%), Positives = 155/271 (57%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + I+E+R LPI + + + + + N +V++ GETG GKTTQ+ Q+L E ++ +
Sbjct: 59 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT--DY 116
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I CTQPRR++A SVA+R+S E G N+G+ +GY IR E + + I + T+G+LLR
Sbjct: 117 GMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLR-- 174
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+EA D SA II+DE HER +D + ++R+++ L+LI+
Sbjct: 175 -----ESLREAD----LDHYSA---IIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 222
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL----ED-VLSILKSAESNHLDSAS--- 407
SAT+DA++F+ +FG P+ +PG T+PV + ED V + +K + HL A
Sbjct: 223 SATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDI 282
Query: 408 -LIVPN-EDPELTE----ENKSTLDEAISLA 432
+ +P ED E+T E+ L+ A +LA
Sbjct: 283 LIFMPGQEDIEVTSDQIVEHLEELENAPALA 313
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 433 (157.5 bits), Expect = 1.4e-69, Sum P(2) = 1.4e-69
Identities = 118/368 (32%), Positives = 191/368 (51%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 739 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 796
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 797 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 856
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 857 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 915
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 916 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 971
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P + K+A A + + A
Sbjct: 972 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP----KDKQALADQ-KKAK 1026
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1027 FHQTEGDHLTLLAVYNSWKNNKF--SNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1083
Query: 888 IPEDVSSC 895
DV SC
Sbjct: 1084 ---DVVSC 1088
Score = 367 (134.2 bits), Expect = 1.4e-69, Sum P(2) = 1.4e-69
Identities = 89/229 (38%), Positives = 132/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 550 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG--KIGC 607
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 608 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------- 660
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D++ I++DE HER ++D + +++ + ++LI+ SATLD
Sbjct: 661 ----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD 713
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 714 AVKFSQYFYEAPIFTIPGRTYPVEILYT-------KEPETDYLD-ASLI 754
Score = 52 (23.4 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 399 ESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQH 458
E + +A+++ E P+ EE L + DE D+ +ELV E P + +
Sbjct: 393 EIKQMIAANVLSKEEFPDFDEET-GILPKVDD---EEDE-DLEIELVE-EEPPFLRGHTK 446
Query: 459 TLTGLTPLMVLAGK-GRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH 517
++P+ ++ G + M+ S AK+ R Q + + + KH
Sbjct: 447 QSMDMSPIKIVKNPDGSLSQAAMMQSA------LAKERRELKQAQREAEMDSIPMGLNKH 500
Query: 518 MENALSDSMKQQL 530
+ L D+ +Q+
Sbjct: 501 WVDPLPDAEGRQI 513
Score = 45 (20.9 bits), Expect = 4.6e-35, Sum P(3) = 4.6e-35
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD--G-RTALQLGE--QENQPEVAQIIKK 516
GL + L +GRV +V ++S G ++K G +T+L + + QE ++ ++
Sbjct: 285 GLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRR 344
Query: 517 HMENALSDSMKQQLLDK--YLATVN-PELIDLVLIEQLLRKI 555
++ ++ + D+ +L+ V+ PE+ D L + L +I
Sbjct: 345 NLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRI 386
Score = 43 (20.2 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A R S+ FG C + Q G+T + + +++K L LI DP+LT+
Sbjct: 619 AKRVSEEFGCC-LGQEVGYTIRFEDCTSPE--TVIKYMTDGMLLRECLI----DPDLTQY 671
Query: 421 NKSTLDEA 428
LDEA
Sbjct: 672 AIIMLDEA 679
Score = 42 (19.8 bits), Expect = 4.6e-35, Sum P(3) = 4.6e-35
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 398 AESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFD 439
A+ +L S + D L +K + ISLA N FD
Sbjct: 23 AKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFD 64
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 433 (157.5 bits), Expect = 1.5e-69, Sum P(2) = 1.5e-69
Identities = 118/368 (32%), Positives = 191/368 (51%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 757 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 814
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 815 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 874
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 875 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 933
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 934 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 989
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P + K+A A + + A
Sbjct: 990 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP----KDKQALADQ-KKAK 1044
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1045 FHQTEGDHLTLLAVYNSWKNNKF--SNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1101
Query: 888 IPEDVSSC 895
DV SC
Sbjct: 1102 ---DVVSC 1106
Score = 367 (134.2 bits), Expect = 1.5e-69, Sum P(2) = 1.5e-69
Identities = 89/229 (38%), Positives = 132/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 568 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG--KIGC 625
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 626 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------- 678
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D++ I++DE HER ++D + +++ + ++LI+ SATLD
Sbjct: 679 ----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD 731
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 732 AVKFSQYFYEAPIFTIPGRTYPVEILYT-------KEPETDYLD-ASLI 772
Score = 52 (23.4 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 399 ESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQH 458
E + +A+++ E P+ EE L + DE D+ +ELV E P + +
Sbjct: 411 EIKQMIAANVLSKEEFPDFDEET-GILPKVDD---EEDE-DLEIELVE-EEPPFLRGHTK 464
Query: 459 TLTGLTPLMVLAGK-GRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH 517
++P+ ++ G + M+ S AK+ R Q + + + KH
Sbjct: 465 QSMDMSPIKIVKNPDGSLSQAAMMQSA------LAKERRELKQAQREAEMDSIPMGLNKH 518
Query: 518 MENALSDSMKQQL 530
+ L D+ +Q+
Sbjct: 519 WVDPLPDAEGRQI 531
Score = 45 (20.9 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD--G-RTALQLGE--QENQPEVAQIIKK 516
GL + L +GRV +V ++S G ++K G +T+L + + QE ++ ++
Sbjct: 303 GLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRR 362
Query: 517 HMENALSDSMKQQLLDK--YLATVN-PELIDLVLIEQLLRKI 555
++ ++ + D+ +L+ V+ PE+ D L + L +I
Sbjct: 363 NLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRI 404
Score = 43 (20.2 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A R S+ FG C + Q G+T + + +++K L LI DP+LT+
Sbjct: 637 AKRVSEEFGCC-LGQEVGYTIRFEDCTSPE--TVIKYMTDGMLLRECLI----DPDLTQY 689
Query: 421 NKSTLDEA 428
LDEA
Sbjct: 690 AIIMLDEA 697
Score = 42 (19.8 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 398 AESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFD 439
A+ +L S + D L +K + ISLA N FD
Sbjct: 35 AKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFD 76
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 450 (163.5 bits), Expect = 1.6e-69, Sum P(3) = 1.6e-69
Identities = 116/350 (33%), Positives = 190/350 (54%)
Query: 537 TVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDTSK 592
T +PE +D LI + +I + G IL+FL G E+I+ L +
Sbjct: 692 TKDPEADYLDASLITVM--QIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPD 749
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+I+P++S +PS Q K+F+ PPG RK++++TNIAET++TID + YVID G K+K ++
Sbjct: 750 LIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFN 809
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIE 711
P N + +L + +S+A+A+QR+GRAGR G CY LY++ + + +PEI+R +
Sbjct: 810 PKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLG 869
Query: 712 ELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
L +K + I D L +DPP T+ +A+ L +GAL + +T LG K+
Sbjct: 870 NTVLTMKAM----GINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAE 925
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYG 830
+ P +SKML ++ + C D LT+ ++ F P ++K+A A + + A +
Sbjct: 926 FPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRP----KEKQALADQ-KKAKFFQ 980
Query: 831 GQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQT 880
+ D L ++ +E WKN+K W C + FV + + +RKQL T
Sbjct: 981 PEGDHLTLLNVYESWKNSKF--SNPW-CFENFVQARSLRRAQDVRKQLIT 1027
Score = 354 (129.7 bits), Expect = 1.6e-69, Sum P(3) = 1.6e-69
Identities = 88/234 (37%), Positives = 134/234 (57%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A R I E+R LPI ++ V +Q++++ GETG GKTTQ+ Q+L E + G
Sbjct: 496 ATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGY--GTR 553
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
KI CTQPRR++A SV++R++ E G +G +GY IR E + I F T+G+LLR
Sbjct: 554 GKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLR-- 611
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
E P ++SA + II+DE HER +D + +++ L P L++++
Sbjct: 612 ---------ECLLDP---NLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLIT 659
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
SATL+A++FS+YF + +PG T+PV Y +D E+++LD ASLI
Sbjct: 660 SATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKD-------PEADYLD-ASLI 705
Score = 44 (20.5 bits), Expect = 1.6e-69, Sum P(3) = 1.6e-69
Identities = 24/135 (17%), Positives = 51/135 (37%)
Query: 41 ASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEI 100
A + V F +LS+ ++ ++ KK T+ ++ + K+ T
Sbjct: 48 AISENVPDFPESLSSHLFNLIEKMKKKTTTTTNNNNNNNNNNTNTAKTTTTTTTTTTTTN 107
Query: 101 LPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE 160
+ SE + L + + PG + K + +GK VD+ + +K E
Sbjct: 108 NNNYKESEWEETKLNSNSNNQKKNQF-PGLSIP----NKVEWDQGKIVDVPIDDEKTKEE 162
Query: 161 IAMKVESLTSRIEKD 175
+ K + + E++
Sbjct: 163 LKRKQQDMDREFERE 177
Score = 43 (20.2 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 486 ADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQ 529
AD K KD A+ EN P+ + + H+ N L + MK++
Sbjct: 36 ADENPKLKDFNKAIS----ENVPDFPESLSSHLFN-LIEKMKKK 74
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 409 (149.0 bits), Expect = 1.8e-69, Sum P(4) = 1.8e-69
Identities = 123/365 (33%), Positives = 188/365 (51%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKF---VIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVFL G ++I +T +L + R SK ++IP+++ +PS Q K+F+ PP
Sbjct: 462 GDILVFLTGQDEI-ETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNA 520
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK+IL+TNIAET++TID+++YVID G K+ +++ + +L +SKASA QRAGRAG
Sbjct: 521 RKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAG 580
Query: 679 RCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE-DFLQKTLDP 736
R G C+ LY+ L D VPEI+RI + L +K L N I DFL DP
Sbjct: 581 RTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFL----DP 636
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P T+ A+ L +GAL+ ++T+LG ++ V P+M KML + C + +T+
Sbjct: 637 PPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTI 696
Query: 797 ACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A + P +K A A+ ++G D L+++ + W Q
Sbjct: 697 AAMLSVNS--AIFYRPKDKIIHADTARKNFNHMHG---DHLSLLQVYNQWAETDYSTQ-- 749
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYP 915
W C + F+ M +R+QL L++ + D+ SC V + AG +
Sbjct: 750 W-CYENFIQYRSMKRARDVREQL-VGLMQR--VEIDMVSCLPET-VN--VRKAATAGYFY 802
Query: 916 MVARL 920
VARL
Sbjct: 803 HVARL 807
Score = 391 (142.7 bits), Expect = 1.8e-69, Sum P(4) = 1.8e-69
Identities = 86/238 (36%), Positives = 142/238 (59%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK 232
EK+ + E R LP+ FK+ + + V +QV++I GETG GKTTQVPQ+L+E ++K
Sbjct: 237 EKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTK 296
Query: 233 GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLL 292
+ I CTQPRR++A SVA R++ E G +G+ +GY IR E + + + T+G L
Sbjct: 297 DKKM-IGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLH 355
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R +S+ P D+++ + +I+DE HER ++D + +++D+ P L+L
Sbjct: 356 REFLSE-----------P---DLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKL 401
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
++ SATLDA++FS +F P+ ++PG YPV FY K+ E++++D+ + V
Sbjct: 402 LISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYT-------KAPEADYIDACCVSV 452
Score = 44 (20.5 bits), Expect = 1.8e-69, Sum P(4) = 1.8e-69
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 69 GMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSE 108
G KSS R Q ++ K +KR+ D+ + LP F E
Sbjct: 223 GSREKSSSR--QPELTE-KERKRLTLDETRRSLPVYPFKE 259
Score = 43 (20.2 bits), Expect = 1.8e-69, Sum P(4) = 1.8e-69
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 1034 QHGENVMSSPDKSVTVVVDRWLYF 1057
+H + VM P+ S+ + RW+ +
Sbjct: 817 KHNQTVMIHPNSSLFEELPRWVLY 840
Score = 41 (19.5 bits), Expect = 5.6e-33, Sum P(3) = 5.6e-33
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 388 LEDVLSILKSAESNHLDSASLIVPNEDPELTEENKS--TLDE 427
L+D + +++ LD + + PELTE+ + TLDE
Sbjct: 209 LDDQIDFIQALT---LDGSREKSSSRQPELTEKERKRLTLDE 247
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 433 (157.5 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 118/368 (32%), Positives = 191/368 (51%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 747 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 804
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 805 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 864
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 865 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 923
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 924 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 979
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P + K+A A + + A
Sbjct: 980 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP----KDKQALADQ-KKAK 1034
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1035 FHQTEGDHLTLLAVYNSWKNNKF--SNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1091
Query: 888 IPEDVSSC 895
DV SC
Sbjct: 1092 ---DVVSC 1096
Score = 365 (133.5 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 89/229 (38%), Positives = 132/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG--KIGC 615
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 616 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------- 668
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D++ I++DE HER ++D + +++ + ++LI+ SATLD
Sbjct: 669 ----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD 721
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 722 AVKFSQYFYEAPIFTIPGRTYPVEILYT-------KEPETDYLD-ASLI 762
Score = 52 (23.4 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 399 ESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQH 458
E + +A+++ E P+ EE L + DE D+ +ELV E P + +
Sbjct: 401 EIKQMIAANVLSKEEFPDFDEET-GILPKVDD---EEDE-DLEIELVE-EEPPFLRGHTK 454
Query: 459 TLTGLTPLMVLAGK-GRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH 517
++P+ ++ G + M+ S AK+ R Q + + + KH
Sbjct: 455 QSMDMSPIKIVKNPDGSLSQAAMMQSA------LAKERRELKQAQREAEMDSIPMGLNKH 508
Query: 518 MENALSDSMKQQL 530
+ L D+ +Q+
Sbjct: 509 WVDPLPDAEGRQI 521
Score = 45 (20.9 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD--G-RTALQLGE--QENQPEVAQIIKK 516
GL + L +GRV +V ++S G ++K G +T+L + + QE ++ ++
Sbjct: 293 GLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRR 352
Query: 517 HMENALSDSMKQQLLDK--YLATVN-PELIDLVLIEQLLRKI 555
++ ++ + D+ +L+ V+ PE+ D L + L +I
Sbjct: 353 NLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRI 394
Score = 43 (20.2 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A R S+ FG C + Q G+T + + +++K L LI DP+LT+
Sbjct: 627 AKRVSEEFGCC-LGQEVGYTIRFEDCTSPE--TVIKYMTDGMLLRECLI----DPDLTQY 679
Query: 421 NKSTLDEA 428
LDEA
Sbjct: 680 AIIMLDEA 687
Score = 42 (19.8 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 398 AESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFD 439
A+ +L S + D L +K + ISLA N FD
Sbjct: 23 AKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFD 64
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 433 (157.5 bits), Expect = 2.2e-69, Sum P(2) = 2.2e-69
Identities = 118/368 (32%), Positives = 191/368 (51%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 716 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 773
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 774 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 833
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 834 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 892
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 893 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 948
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P + K+A A + + A
Sbjct: 949 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP----KDKQALADQ-KKAK 1003
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1004 FHQTEGDHLTLLAVYNSWKNNKF--SNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1060
Query: 888 IPEDVSSC 895
DV SC
Sbjct: 1061 ---DVVSC 1065
Score = 365 (133.5 bits), Expect = 2.2e-69, Sum P(2) = 2.2e-69
Identities = 89/229 (38%), Positives = 132/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 527 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG--KIGC 584
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 585 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------- 637
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D++ I++DE HER ++D + +++ + ++LI+ SATLD
Sbjct: 638 ----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD 690
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 691 AVKFSQYFYEAPIFTIPGRTYPVEILYT-------KEPETDYLD-ASLI 731
Score = 52 (23.4 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 399 ESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQH 458
E + +A+++ E P+ EE L + DE D+ +ELV E P + +
Sbjct: 370 EIKQMIAANVLSKEEFPDFDEET-GILPKVDD---EEDE-DLEIELVE-EEPPFLRGHTK 423
Query: 459 TLTGLTPLMVLAGK-GRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH 517
++P+ ++ G + M+ S AK+ R Q + + + KH
Sbjct: 424 QSMDMSPIKIVKNPDGSLSQAAMMQSA------LAKERRELKQAQREAEMDSIPMGLNKH 477
Query: 518 MENALSDSMKQQL 530
+ L D+ +Q+
Sbjct: 478 WVDPLPDAEGRQI 490
Score = 45 (20.9 bits), Expect = 4.5e-35, Sum P(3) = 4.5e-35
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD--G-RTALQLGE--QENQPEVAQIIKK 516
GL + L +GRV +V ++S G ++K G +T+L + + QE ++ ++
Sbjct: 262 GLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRR 321
Query: 517 HMENALSDSMKQQLLDK--YLATVN-PELIDLVLIEQLLRKI 555
++ ++ + D+ +L+ V+ PE+ D L + L +I
Sbjct: 322 NLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRI 363
Score = 43 (20.2 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A R S+ FG C + Q G+T + + +++K L LI DP+LT+
Sbjct: 596 AKRVSEEFGCC-LGQEVGYTIRFEDCTSPE--TVIKYMTDGMLLRECLI----DPDLTQY 648
Query: 421 NKSTLDEA 428
LDEA
Sbjct: 649 AIIMLDEA 656
Score = 42 (19.8 bits), Expect = 4.5e-35, Sum P(3) = 4.5e-35
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 398 AESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFD 439
A+ +L S + D L +K + ISLA N FD
Sbjct: 23 AKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFD 64
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 433 (157.5 bits), Expect = 2.3e-69, Sum P(2) = 2.3e-69
Identities = 118/368 (32%), Positives = 191/368 (51%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 747 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 804
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 805 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 864
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 865 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 923
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 924 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 979
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P + K+A A + + A
Sbjct: 980 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP----KDKQALADQ-KKAK 1034
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1035 FHQTEGDHLTLLAVYNSWKNNKF--SNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1091
Query: 888 IPEDVSSC 895
DV SC
Sbjct: 1092 ---DVVSC 1096
Score = 365 (133.5 bits), Expect = 2.3e-69, Sum P(2) = 2.3e-69
Identities = 89/229 (38%), Positives = 132/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG--KIGC 615
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 616 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------- 668
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D++ I++DE HER ++D + +++ + ++LI+ SATLD
Sbjct: 669 ----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD 721
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 722 AVKFSQYFYEAPIFTIPGRTYPVEILYT-------KEPETDYLD-ASLI 762
Score = 52 (23.4 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 399 ESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQH 458
E + +A+++ E P+ EE L + DE D+ +ELV E P + +
Sbjct: 401 EIKQMIAANVLSKEEFPDFDEET-GILPKVDD---EEDE-DLEIELVE-EEPPFLRGHTK 454
Query: 459 TLTGLTPLMVLAGK-GRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH 517
++P+ ++ G + M+ S AK+ R Q + + + KH
Sbjct: 455 QSMDMSPIKIVKNPDGSLSQAAMMQSA------LAKERRELKQAQREAEMDSIPMGLNKH 508
Query: 518 MENALSDSMKQQL 530
+ L D+ +Q+
Sbjct: 509 WVDPLPDAEGRQI 521
Score = 45 (20.9 bits), Expect = 4.7e-35, Sum P(3) = 4.7e-35
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD--G-RTALQLGE--QENQPEVAQIIKK 516
GL + L +GRV +V ++S G ++K G +T+L + + QE ++ ++
Sbjct: 293 GLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRR 352
Query: 517 HMENALSDSMKQQLLDK--YLATVN-PELIDLVLIEQLLRKI 555
++ ++ + D+ +L+ V+ PE+ D L + L +I
Sbjct: 353 NLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRI 394
Score = 43 (20.2 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A R S+ FG C + Q G+T + + +++K L LI DP+LT+
Sbjct: 627 AKRVSEEFGCC-LGQEVGYTIRFEDCTSPE--TVIKYMTDGMLLRECLI----DPDLTQY 679
Query: 421 NKSTLDEA 428
LDEA
Sbjct: 680 AIIMLDEA 687
Score = 42 (19.8 bits), Expect = 4.7e-35, Sum P(3) = 4.7e-35
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 398 AESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFD 439
A+ +L S + D L +K + ISLA N FD
Sbjct: 23 AKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFD 64
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 433 (157.5 bits), Expect = 2.4e-69, Sum P(2) = 2.4e-69
Identities = 118/368 (32%), Positives = 191/368 (51%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 769 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 826
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 827 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 886
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 887 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 945
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 946 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 1001
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P + K+A A + + A
Sbjct: 1002 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP----KDKQALADQ-KKAK 1056
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1057 FHQTEGDHLTLLAVYNSWKNNKF--SNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1113
Query: 888 IPEDVSSC 895
DV SC
Sbjct: 1114 ---DVVSC 1118
Score = 365 (133.5 bits), Expect = 2.4e-69, Sum P(2) = 2.4e-69
Identities = 89/229 (38%), Positives = 132/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 580 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG--KIGC 637
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 638 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------- 690
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D++ I++DE HER ++D + +++ + ++LI+ SATLD
Sbjct: 691 ----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD 743
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 744 AVKFSQYFYEAPIFTIPGRTYPVEILYT-------KEPETDYLD-ASLI 784
Score = 52 (23.4 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 399 ESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQH 458
E + +A+++ E P+ EE L + DE D+ +ELV E P + +
Sbjct: 423 EIKQMIAANVLSKEEFPDFDEET-GILPKVDD---EEDE-DLEIELVE-EEPPFLRGHTK 476
Query: 459 TLTGLTPLMVLAGK-GRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH 517
++P+ ++ G + M+ S AK+ R Q + + + KH
Sbjct: 477 QSMDMSPIKIVKNPDGSLSQAAMMQSA------LAKERRELKQAQREAEMDSIPMGLNKH 530
Query: 518 MENALSDSMKQQL 530
+ L D+ +Q+
Sbjct: 531 WVDPLPDAEGRQI 543
Score = 45 (20.9 bits), Expect = 5.2e-35, Sum P(3) = 5.2e-35
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD--G-RTALQLGE--QENQPEVAQIIKK 516
GL + L +GRV +V ++S G ++K G +T+L + + QE ++ ++
Sbjct: 315 GLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRR 374
Query: 517 HMENALSDSMKQQLLDK--YLATVN-PELIDLVLIEQLLRKI 555
++ ++ + D+ +L+ V+ PE+ D L + L +I
Sbjct: 375 NLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRI 416
Score = 43 (20.2 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A R S+ FG C + Q G+T + + +++K L LI DP+LT+
Sbjct: 649 AKRVSEEFGCC-LGQEVGYTIRFEDCTSPE--TVIKYMTDGMLLRECLI----DPDLTQY 701
Query: 421 NKSTLDEA 428
LDEA
Sbjct: 702 AIIMLDEA 709
Score = 42 (19.8 bits), Expect = 5.2e-35, Sum P(3) = 5.2e-35
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 398 AESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFD 439
A+ +L S + D L +K + ISLA N FD
Sbjct: 23 AKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFD 64
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 433 (157.5 bits), Expect = 2.5e-69, Sum P(2) = 2.5e-69
Identities = 118/368 (32%), Positives = 191/368 (51%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 771 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 828
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 829 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 888
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 889 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 947
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 948 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 1003
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P + K+A A + + A
Sbjct: 1004 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP----KDKQALADQ-KKAK 1058
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1059 FHQTEGDHLTLLAVYNSWKNNKF--SNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1115
Query: 888 IPEDVSSC 895
DV SC
Sbjct: 1116 ---DVVSC 1120
Score = 365 (133.5 bits), Expect = 2.5e-69, Sum P(2) = 2.5e-69
Identities = 89/229 (38%), Positives = 132/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 582 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG--KIGC 639
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 640 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------- 692
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D++ I++DE HER ++D + +++ + ++LI+ SATLD
Sbjct: 693 ----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD 745
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 746 AVKFSQYFYEAPIFTIPGRTYPVEILYT-------KEPETDYLD-ASLI 786
Score = 52 (23.4 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 399 ESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQH 458
E + +A+++ E P+ EE L + DE D+ +ELV E P + +
Sbjct: 425 EIKQMIAANVLSKEEFPDFDEET-GILPKVDD---EEDE-DLEIELVE-EEPPFLRGHTK 478
Query: 459 TLTGLTPLMVLAGK-GRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH 517
++P+ ++ G + M+ S AK+ R Q + + + KH
Sbjct: 479 QSMDMSPIKIVKNPDGSLSQAAMMQSA------LAKERRELKQAQREAEMDSIPMGLNKH 532
Query: 518 MENALSDSMKQQL 530
+ L D+ +Q+
Sbjct: 533 WVDPLPDAEGRQI 545
Score = 45 (20.9 bits), Expect = 5.3e-35, Sum P(3) = 5.3e-35
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD--G-RTALQLGE--QENQPEVAQIIKK 516
GL + L +GRV +V ++S G ++K G +T+L + + QE ++ ++
Sbjct: 317 GLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRR 376
Query: 517 HMENALSDSMKQQLLDK--YLATVN-PELIDLVLIEQLLRKI 555
++ ++ + D+ +L+ V+ PE+ D L + L +I
Sbjct: 377 NLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRI 418
Score = 43 (20.2 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A R S+ FG C + Q G+T + + +++K L LI DP+LT+
Sbjct: 651 AKRVSEEFGCC-LGQEVGYTIRFEDCTSPE--TVIKYMTDGMLLRECLI----DPDLTQY 703
Query: 421 NKSTLDEA 428
LDEA
Sbjct: 704 AIIMLDEA 711
Score = 42 (19.8 bits), Expect = 5.3e-35, Sum P(3) = 5.3e-35
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 398 AESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFD 439
A+ +L S + D L +K + ISLA N FD
Sbjct: 23 AKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFD 64
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 439 (159.6 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 111/348 (31%), Positives = 185/348 (53%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDTSK 592
L T PE L + +I + G +LVFL G E+I+ + + L D +
Sbjct: 722 LYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPE 781
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+I+P++ +PS Q ++F P G RK++++TNIAET++TID + YV+D G +K+K Y+
Sbjct: 782 LIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYN 841
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ--LRAASLPDFQVPEIKRIPI 710
P + + +L + +S+A+AKQR+GRAGR G CY LY++ R LP VPEI+R +
Sbjct: 842 PKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPT-PVPEIQRTNL 900
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
LQ+K + N N+ DF +D P ++ A+ L + AL D +T+LG ++
Sbjct: 901 ASTLLQLKAMGIN-NLIDF--DFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAE 957
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYG 830
+ P +SK+L ++ + C + LT+ + ++ F P K++ A + A +
Sbjct: 958 FPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRP-----KEKQDHADQKKAKFHQ 1012
Query: 831 GQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
+ D L ++A + WKN + W C + F+ M +RKQL
Sbjct: 1013 PEGDHLTLLAVYNSWKN--HHFSQPW-CFENFIQVRSMKRAQDIRKQL 1057
Score = 358 (131.1 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 84/230 (36%), Positives = 134/230 (58%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+VE+R LPI + K + + NQ++++ GETG GKTTQ+ Q+ +E G KI C
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEA--GLGRRGKIGC 590
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R++ E G +G ++GY IR E + + I + T+G+LLR
Sbjct: 591 TQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLR------- 643
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D+S + I++DE HER ++D + +++ P L+LI+ SATLD
Sbjct: 644 ----ECLIDP---DLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLD 696
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
+ +FS+YF P+ +PG T+PV+ Y + ES++L++A + V
Sbjct: 697 SVKFSEYFLEAPIFTIPGRTFPVEILYTRE-------PESDYLEAAHITV 739
Score = 45 (20.9 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 14/60 (23%), Positives = 24/60 (40%)
Query: 402 HLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLT 461
HL S ++ + K + I LA N FD L + + +G + ++ T T
Sbjct: 6 HLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTFDKLKKALDSQGLGDQFDDSLTAT 65
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 439 (159.6 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 111/348 (31%), Positives = 185/348 (53%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDTSK 592
L T PE L + +I + G +LVFL G E+I+ + + L D +
Sbjct: 722 LYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPE 781
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+I+P++ +PS Q ++F P G RK++++TNIAET++TID + YV+D G +K+K Y+
Sbjct: 782 LIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYN 841
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ--LRAASLPDFQVPEIKRIPI 710
P + + +L + +S+A+AKQR+GRAGR G CY LY++ R LP VPEI+R +
Sbjct: 842 PKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPT-PVPEIQRTNL 900
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
LQ+K + N N+ DF +D P ++ A+ L + AL D +T+LG ++
Sbjct: 901 ASTLLQLKAMGIN-NLIDF--DFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAE 957
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYG 830
+ P +SK+L ++ + C + LT+ + ++ F P K++ A + A +
Sbjct: 958 FPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRP-----KEKQDHADQKKAKFHQ 1012
Query: 831 GQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
+ D L ++A + WKN + W C + F+ M +RKQL
Sbjct: 1013 PEGDHLTLLAVYNSWKN--HHFSQPW-CFENFIQVRSMKRAQDIRKQL 1057
Score = 358 (131.1 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 84/230 (36%), Positives = 134/230 (58%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+VE+R LPI + K + + NQ++++ GETG GKTTQ+ Q+ +E G KI C
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEA--GLGRRGKIGC 590
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R++ E G +G ++GY IR E + + I + T+G+LLR
Sbjct: 591 TQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLR------- 643
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D+S + I++DE HER ++D + +++ P L+LI+ SATLD
Sbjct: 644 ----ECLIDP---DLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLD 696
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
+ +FS+YF P+ +PG T+PV+ Y + ES++L++A + V
Sbjct: 697 SVKFSEYFLEAPIFTIPGRTFPVEILYTRE-------PESDYLEAAHITV 739
Score = 45 (20.9 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 14/60 (23%), Positives = 24/60 (40%)
Query: 402 HLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLT 461
HL S ++ + K + I LA N FD L + + +G + ++ T T
Sbjct: 6 HLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTFDKLKKALDSQGLGDQFDDSLTAT 65
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 409 (149.0 bits), Expect = 3.1e-69, Sum P(2) = 3.1e-69
Identities = 125/403 (31%), Positives = 198/403 (49%)
Query: 557 MDSEDGAILVFLPGWEDINKTRDRL--LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
++ +G IL+FL G E+I + R+ D IPL+S +P Q+++F+
Sbjct: 289 VEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPA 348
Query: 615 PPG------CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
PP RK ++STNIAET++TID VV+VID G K+K Y+P V +L +SKA
Sbjct: 349 PPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKA 408
Query: 669 SAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIE 727
SA QRAGRAGR + G C+ LY++ S + D PEI R + + LQ+K L E
Sbjct: 409 SAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKL----GTE 464
Query: 728 DFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
D + +DPP T+ A+ +L + A++ D ++TELG + + P ++KML +
Sbjct: 465 DLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTE 524
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECW 845
++C + L++ + + PNE + A AK A + G D L ++ + +
Sbjct: 525 LNCSNEILSITAMLSVPQCW---VRPNEMRTEADEAKARFAHIDG---DHLTLLNVYHSF 578
Query: 846 KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF--IPEDVSSCSHNARVPG 903
K ++ Q W C F++ M +R QL + K + D S +
Sbjct: 579 KQNQEDPQ--W-CYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLN--- 632
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
I L+AG + VA L ++G +V V LHP ++
Sbjct: 633 -IRKALVAGFFMQVAHLE---RSGH-YVTVKDNQLVNLHPSTV 670
Score = 378 (138.1 bits), Expect = 3.1e-69, Sum P(2) = 3.1e-69
Identities = 83/232 (35%), Positives = 138/232 (59%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK------GE 234
I E+RS+LP+ +K+ + +NQ + + GETG GKTTQ+PQ+ +E + + G+
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
+ CTQPRR++A SVA R++ E +G +GY IR E + + + +CT+G+LLR
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLR- 187
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
EA N P D L I+DE HER +D ++ +I++++ + +++++
Sbjct: 188 ----------EAMNSPLLDKYKVL---ILDEAHERTLATDILMGLIKEIVRNRADIKVVI 234
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSA 406
MSATLDA +F +YF CP++ VPG T+PV+ F+ + AE ++L++A
Sbjct: 235 MSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPN-------AEKDYLEAA 279
Score = 41 (19.5 bits), Expect = 8.6e-34, Sum P(2) = 8.6e-34
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 522 LSDSMKQQLLDKYLATVNPELIDLVLIEQLL 552
L ++M LLDKY + E + L +L
Sbjct: 186 LREAMNSPLLDKYKVLILDEAHERTLATDIL 216
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 409 (149.0 bits), Expect = 3.1e-69, Sum P(2) = 3.1e-69
Identities = 125/403 (31%), Positives = 198/403 (49%)
Query: 557 MDSEDGAILVFLPGWEDINKTRDRL--LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
++ +G IL+FL G E+I + R+ D IPL+S +P Q+++F+
Sbjct: 289 VEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPA 348
Query: 615 PPG------CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
PP RK ++STNIAET++TID VV+VID G K+K Y+P V +L +SKA
Sbjct: 349 PPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKA 408
Query: 669 SAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIE 727
SA QRAGRAGR + G C+ LY++ S + D PEI R + + LQ+K L E
Sbjct: 409 SAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKL----GTE 464
Query: 728 DFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
D + +DPP T+ A+ +L + A++ D ++TELG + + P ++KML +
Sbjct: 465 DLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTE 524
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECW 845
++C + L++ + + PNE + A AK A + G D L ++ + +
Sbjct: 525 LNCSNEILSITAMLSVPQCW---VRPNEMRTEADEAKARFAHIDG---DHLTLLNVYHSF 578
Query: 846 KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF--IPEDVSSCSHNARVPG 903
K ++ Q W C F++ M +R QL + K + D S +
Sbjct: 579 KQNQEDPQ--W-CYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLN--- 632
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
I L+AG + VA L ++G +V V LHP ++
Sbjct: 633 -IRKALVAGFFMQVAHLE---RSGH-YVTVKDNQLVNLHPSTV 670
Score = 378 (138.1 bits), Expect = 3.1e-69, Sum P(2) = 3.1e-69
Identities = 83/232 (35%), Positives = 138/232 (59%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK------GE 234
I E+RS+LP+ +K+ + +NQ + + GETG GKTTQ+PQ+ +E + + G+
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
+ CTQPRR++A SVA R++ E +G +GY IR E + + + +CT+G+LLR
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLR- 187
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
EA N P D L I+DE HER +D ++ +I++++ + +++++
Sbjct: 188 ----------EAMNSPLLDKYKVL---ILDEAHERTLATDILMGLIKEIVRNRADIKVVI 234
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSA 406
MSATLDA +F +YF CP++ VPG T+PV+ F+ + AE ++L++A
Sbjct: 235 MSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPN-------AEKDYLEAA 279
Score = 41 (19.5 bits), Expect = 8.6e-34, Sum P(2) = 8.6e-34
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 522 LSDSMKQQLLDKYLATVNPELIDLVLIEQLL 552
L ++M LLDKY + E + L +L
Sbjct: 186 LREAMNSPLLDKYKVLILDEAHERTLATDIL 216
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 433 (157.5 bits), Expect = 3.3e-69, Sum P(3) = 3.3e-69
Identities = 118/368 (32%), Positives = 191/368 (51%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 743 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 800
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 801 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 860
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 861 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 919
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 920 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 975
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P + K+A A + + A
Sbjct: 976 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP----KDKQALADQ-KKAK 1030
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1031 FHQTEGDHLTLLAVYNSWKNNKF--SNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1087
Query: 888 IPEDVSSC 895
DV SC
Sbjct: 1088 ---DVVSC 1092
Score = 367 (134.2 bits), Expect = 3.3e-69, Sum P(3) = 3.3e-69
Identities = 89/229 (38%), Positives = 132/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 554 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG--KIGC 611
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 612 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------- 664
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D++ I++DE HER ++D + +++ + ++LI+ SATLD
Sbjct: 665 ----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD 717
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 718 AVKFSQYFYEAPIFTIPGRTYPVEILYT-------KEPETDYLD-ASLI 758
Score = 52 (23.4 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 399 ESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQH 458
E + +A+++ E P+ EE L + DE D+ +ELV E P + +
Sbjct: 397 EIKQMIAANVLSKEEFPDFDEET-GILPKVDD---EEDE-DLEIELVE-EEPPFLRGHTK 450
Query: 459 TLTGLTPLMVLAGK-GRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH 517
++P+ ++ G + M+ S AK+ R Q + + + KH
Sbjct: 451 QSMDMSPIKIVKNPDGSLSQAAMMQSA------LAKERRELKQAQREAEMDSIPMGLNKH 504
Query: 518 MENALSDSMKQQL 530
+ L D+ +Q+
Sbjct: 505 WVDPLPDAEGRQI 517
Score = 47 (21.6 bits), Expect = 3.3e-69, Sum P(3) = 3.3e-69
Identities = 20/94 (21%), Positives = 35/94 (37%)
Query: 56 RERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQ 115
++R H K S+S R ++R + KR + + + ++G
Sbjct: 161 KQRDAEHRDKAKKKKRSRSRDRDRERERDRDREHKRRHRSRSRSRSRTRERNKGKSRYRS 220
Query: 116 DLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVD 149
+ PP D + +K R D+ R K VD
Sbjct: 221 RSRSQSPPKDRKDRDKYG---ERNLDRWRDKHVD 251
Score = 45 (20.9 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD--G-RTALQLGE--QENQPEVAQIIKK 516
GL + L +GRV +V ++S G ++K G +T+L + + QE ++ ++
Sbjct: 289 GLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRR 348
Query: 517 HMENALSDSMKQQLLDK--YLATVN-PELIDLVLIEQLLRKI 555
++ ++ + D+ +L+ V+ PE+ D L + L +I
Sbjct: 349 NLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRI 390
Score = 43 (20.2 bits), Expect = 2.3e-35, Sum P(3) = 2.3e-35
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A R S+ FG C + Q G+T + + +++K L LI DP+LT+
Sbjct: 623 AKRVSEEFGCC-LGQEVGYTIRFEDCTSPE--TVIKYMTDGMLLRECLI----DPDLTQY 675
Query: 421 NKSTLDEA 428
LDEA
Sbjct: 676 AIIMLDEA 683
Score = 42 (19.8 bits), Expect = 4.7e-35, Sum P(3) = 4.7e-35
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 398 AESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFD 439
A+ +L S + D L +K + ISLA N FD
Sbjct: 23 AKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFD 64
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 424 (154.3 bits), Expect = 3.6e-69, Sum P(3) = 3.6e-69
Identities = 111/305 (36%), Positives = 159/305 (52%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E ++LVFLPG +IN + LL + + + + PLHS V +Q VF P PG R
Sbjct: 384 ERSSVLVFLPGLGEINYMHE-LLTSLVHK---RLQVYPLHSSVALEEQNNVFLSPVPGYR 439
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
KIILSTNIAE+++T+ DV YVID + D N +L+ SW SK S QR GRAGR
Sbjct: 440 KIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGR 499
Query: 680 CQAGICYHL-YSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
G CY L + S+PD VPE+ R P+ L+VKLLD L L PP
Sbjct: 500 VSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMG-EPRALLATALSPPG 558
Query: 739 SVTIRNAIIVLQDIGALSL-----DE-----KVTELGEKLGCLSVHPLMSKMLFFAILMD 788
I I++L+++GAL++ DE ++T LG L L V+ + K++ +
Sbjct: 559 LSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFG 618
Query: 789 CLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA 848
CLD L +A A ++ F +P + F +S +SD +A++ AF+ WK
Sbjct: 619 CLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSS----KSDCIALVEAFKTWKAC 674
Query: 849 KQRGQ 853
+Q G+
Sbjct: 675 RQTGE 679
Score = 384 (140.2 bits), Expect = 3.6e-69, Sum P(3) = 3.6e-69
Identities = 108/298 (36%), Positives = 162/298 (54%)
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPIS +K+ + S ++SN VV+I G TG GK+TQ+PQ++L+H + C IV TQPR+I
Sbjct: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYCSIVVTQPRKIG 191
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
A+S+A IS ER +G +GY++ LE + + +++ T GVLL+ +VS
Sbjct: 192 ASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVS---------- 241
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-LRLILMSATLDADRFSQ 366
AK + THII+DE+HER DF+L ++R +L + ++++LMSAT+ F+
Sbjct: 242 ---AKS-LMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFAD 297
Query: 367 YFGGCPV---------IQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN--EDP 415
YF PV +V G + V+ +YL D+ I S S HL +I + E
Sbjct: 298 YFA-VPVQNKMNPAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVA 356
Query: 416 ELTEENKSTLD--EAISLAWSNDEFDMLLE----LVSLEGSPNVYNYQHTLTGLTPLM 467
+ LD E+ + AWS +F +LE LV L G + NY H L LT L+
Sbjct: 357 VSLIQMFDDLDMKESGNKAWSGAQF--VLERSSVLVFLPGLGEI-NYMHEL--LTSLV 409
Score = 42 (19.8 bits), Expect = 3.6e-69, Sum P(3) = 3.6e-69
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 892 VSSCSHNARVPGIIHAVLMAGLY 914
VS C+ +V ++H+VL +Y
Sbjct: 1041 VSGCTLLVKVFSVVHSVLHVDVY 1063
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 428 (155.7 bits), Expect = 3.7e-69, Sum P(2) = 3.7e-69
Identities = 114/371 (30%), Positives = 189/371 (50%)
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS--KFVIIPLHSMVPSVQQKKVF 611
+I +D G IL+FL G E+I+ + + L S + +I+P++S +P+ Q ++F
Sbjct: 743 QIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEMQSRIF 802
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
PPG RK++++TNIAET+ITID + YV+D G +K+ +YDP + +L + +S+A A
Sbjct: 803 DPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQAN 862
Query: 672 QRAGRAGRCQAGICYHLYSQL--RAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDF 729
QRAGRAGR G C+ LY++ + LP +PEI+R + L +K + I D
Sbjct: 863 QRAGRAGRTGPGKCFRLYTEAAYQTEMLPT-SIPEIQRQNLSNTILLLKAM----GINDL 917
Query: 730 LQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMD 788
L +DPP T+ A+ L + AL + +T LG K+ + P +SK+L ++ M
Sbjct: 918 LHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMR 977
Query: 789 CLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA 848
C D L++ + + F P K++ T A + A + D L ++ + WK +
Sbjct: 978 CSDEMLSIVAMLNLPNVFYRP-----KEKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQS 1032
Query: 849 KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAV 908
R + W C++ F+ + +R Q+ E I F V SC + +
Sbjct: 1033 --RYSKPW-CAENFIQFRALTRARDVRNQI--ERIMQRF-KYQVMSCGSDTNR---VRQA 1083
Query: 909 LMAGLYPMVAR 919
L +G + AR
Sbjct: 1084 LCSGFFRNAAR 1094
Score = 368 (134.6 bits), Expect = 3.7e-69, Sum P(2) = 3.7e-69
Identities = 85/226 (37%), Positives = 132/226 (58%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I ++R LP+ +F++ + V NQ++++ GETG GKTTQ+ Q+L E ++ I C
Sbjct: 535 IKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEGV--IGC 592
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+L R +V
Sbjct: 593 TQPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVID-- 650
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
P D+ + I++DE HER +D + A+++ P L++I+ SATLD
Sbjct: 651 ---------P---DLKRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLD 698
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSA 406
AD+FS YF CP+ +PG T+PV+ Y +D ES++LD+A
Sbjct: 699 ADKFSAYFNECPIFTIPGRTFPVEILYSKD-------PESDYLDAA 737
Score = 49 (22.3 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 643 SGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
S R +++ P N ++ W + SA++RAGR G
Sbjct: 1167 SKRRQQERIQPLYNKFEGENDW--RLSAQRRAGRGG 1200
>RGD|1306942 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0007140 "male meiosis" evidence=ISO;ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009566
"fertilization" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=ISO;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISO;ISS] [GO:0071547 "piP-body"
evidence=ISO;ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
RGD:1306942 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0030154
GO:GO:0009566 GO:GO:0007283 GO:GO:0003676 GO:GO:0031047
GO:GO:0007140 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034587 eggNOG:COG1643 GeneTree:ENSGT00700000104393
GO:GO:0008026 GO:GO:0071547 CTD:122402 OrthoDB:EOG4F4S96
HOGENOM:HOG000047965 EMBL:AABR03050289 EMBL:AABR03048647
EMBL:AABR03049552 EMBL:AABR03049859 EMBL:AABR03050293
EMBL:AABR03051941 EMBL:BC104675 IPI:IPI00655293 IPI:IPI00895578
RefSeq:XP_001072421.2 UniGene:Rn.126122 STRING:Q3MHU3 PRIDE:Q3MHU3
Ensembl:ENSRNOT00000017118 GeneID:299343 KEGG:rno:299343
UCSC:RGD:1306942 NextBio:645254 Genevestigator:Q3MHU3
Uniprot:Q3MHU3
Length = 1384
Score = 440 (159.9 bits), Expect = 3.8e-69, Sum P(3) = 3.8e-69
Identities = 114/306 (37%), Positives = 161/306 (52%)
Query: 559 SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
SE ++LVFLPG +IN + LL N + + + PLHS V +Q VF P PG
Sbjct: 385 SERSSVLVFLPGLGEINYMHE-LLTNMIHK---RLQVYPLHSSVTLEEQNNVFLSPVPGY 440
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKIILSTNIAE+++T+ DV YVID + D N +L+ SW SK S QR GRAG
Sbjct: 441 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAG 500
Query: 679 RCQAGICYHL-YSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
R G CY L + +++PD VPE+ R P+ L+VKLLD L L PP
Sbjct: 501 RVSKGYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMG-EPRALLATALSPP 559
Query: 738 VSVTIRNAIIVLQDIGALSL-----DE-----KVTELGEKLGCLSVHPLMSKMLFFAILM 787
I I++L+++GAL++ DE ++T LG L L V + K++ +
Sbjct: 560 SLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVF 619
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
CLD L +A A ++ FT+P + F +S +SD LA++ AF W+
Sbjct: 620 GCLDECLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSS----RSDCLALVEAFRAWQA 675
Query: 848 AKQRGQ 853
+QRG+
Sbjct: 676 CRQRGE 681
Score = 365 (133.5 bits), Expect = 3.8e-69, Sum P(3) = 3.8e-69
Identities = 99/286 (34%), Positives = 155/286 (54%)
Query: 168 LTSRIEKDANLRQIVEERSK---LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
L S + K +N+ I E K LPI+ K+ + S ++SN VV+I G TG GK+TQ+PQ+
Sbjct: 111 LRSPLAKISNVACIPETTYKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQY 170
Query: 225 LLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
+L+H + C IV TQPR+I A+S+A IS ER +G +GY++ LE + + ++
Sbjct: 171 VLDHYTQRSAFCNIVVTQPRKIGASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLI 230
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
+ T GVLL+ +VS AK + TH+ +DE+HER DF+L ++R +L
Sbjct: 231 YMTTGVLLQKIVS-------------AKS-LMEFTHVFIDEVHERTEEMDFLLLVVRKLL 276
Query: 345 PSYPH-LRLILMSATLDADRFSQYFGGCPV---------IQVPGFTYPVKSFYLEDVLSI 394
+ +++ILMSAT++ +F+ YF PV +V G + ++ +YL D+ I
Sbjct: 277 RTNSRFVKVILMSATINCKQFADYFA-VPVQNKMNPAYVFEVEGKPHTIEQYYLNDLGHI 335
Query: 395 LKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDM 440
S L L E+P +T K + A+SL D+ DM
Sbjct: 336 YHSG----LPPYRL----EEPVIT---KDVYEVAVSLIQMFDDLDM 370
Score = 44 (20.5 bits), Expect = 3.8e-69, Sum P(3) = 3.8e-69
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 885 NGFIPEDVSSCSHNARVPGIIHAVLMAGLY 914
NG VS C +V I+H+VL +Y
Sbjct: 1036 NGRFAALVSGCPLLVKVFSIVHSVLHVDVY 1065
Score = 37 (18.1 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
A+ A+ I DV+ + E+SY+ + L+
Sbjct: 1070 AQDAVNIRDVLIREGYAELAEESYESKQSYEVLK 1103
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 428 (155.7 bits), Expect = 5.9e-69, Sum P(3) = 5.9e-69
Identities = 117/364 (32%), Positives = 191/364 (52%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTS--KFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
G +LVFLPG E+I + L T + +I P+++ +PS Q K+F+ P G R
Sbjct: 613 GDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGAR 672
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K++L+TNIAET++TID + YV+D G K KSY+P + +L + +SKASA QR GRAGR
Sbjct: 673 KVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGR 732
Query: 680 CQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
G CY LY+ + L D VPEI+R + + L +K L + N+ +F +DPP
Sbjct: 733 TSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIH-NLLNF--DFMDPPP 789
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
S + ++ +L +GAL+ ++T+ G ++ + P++SKM+ + C D +++A
Sbjct: 790 SEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAA 849
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLY-GGQSDQLAVIAAFECWKNAKQRGQEAWF 857
P ++ P +K+ A + + + G D +A + + WK Q W
Sbjct: 850 MLSI-GP-SIFYRPKDKQ--VHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQ--W- 902
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
C + ++ M +R QL+ L + + DVSS NA I ++AG +P
Sbjct: 903 CYENYIQVRSMKRARDIRDQLEGLLER---VEIDVSS---NANELDSIRKSIVAGFFPHT 956
Query: 918 ARLR 921
A+L+
Sbjct: 957 AKLQ 960
Score = 376 (137.4 bits), Expect = 5.9e-69, Sum P(3) = 5.9e-69
Identities = 88/249 (35%), Positives = 145/249 (58%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQ 242
E+R LPI +++D + + V +QV++I GETG GKTTQ+PQ+L E ++K K+ CTQ
Sbjct: 399 EDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTK--LGKVGCTQ 456
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRR++A SVA R++ E G +G +GY IR E + + + + T+G+LLR L+ +
Sbjct: 457 PRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGE---- 512
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
P D+ + + IIVDE HER +D + +++D+ + P L+L++ SAT+DA+
Sbjct: 513 -------P---DLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAE 562
Query: 363 RFSQYFGGCPVIQVPGFTYPV--------KSFYLEDVLS-ILKSAESNHLDSASLIVPN- 412
+FS +F P+ + PG YPV ++ Y++ ++ +L L + +P
Sbjct: 563 KFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQ 622
Query: 413 EDPELTEEN 421
E+ E EEN
Sbjct: 623 EEIEAVEEN 631
Score = 37 (18.1 bits), Expect = 5.9e-69, Sum P(3) = 5.9e-69
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 1034 QHGENVMSSPDKSVTVVVDRWLYFGSTAL 1062
+H + V P ++ V+ RW+ + L
Sbjct: 969 KHPQTVHIHPASGLSQVLPRWVVYHQLVL 997
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 455 (165.2 bits), Expect = 6.7e-69, Sum P(2) = 6.7e-69
Identities = 136/441 (30%), Positives = 225/441 (51%)
Query: 561 DGAILVFLPGWEDINKTRDRL---LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPG 617
DG ILVFL G ++I D + A+ +D + +PL S + + QQ +F+ P
Sbjct: 246 DGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRG-LLPLPLFSGLSTEQQMYIFEEAPAN 304
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
RK+I STNIAE ++TI +VYV+DSG +K ++Y+P + TL + +SKA+A QRAGRA
Sbjct: 305 TRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRA 364
Query: 678 GRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
GR + G C+ LY++ SL D +PE++R + LQ+K L + N+ F L PP
Sbjct: 365 GRTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALGID-NVLHF--DFLTPP 421
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTE-LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
+ + A+ +L +GAL K+T+ LG ++ L+V P+M+K L A CL LT+
Sbjct: 422 PAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTI 481
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW 856
A + + E+K+ + + + A+ G+ D L + ++ + K R +E+
Sbjct: 482 AAMTSAGGDVWIQ-HEGERKQFESRRRKFAA---GEGDHLTFLNVYQAFVT-KGR-KESG 535
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-IPEDVSSCSHNARVPGI----IHAVLMA 911
FC + ++ M+ + +R QL+ L + G + E ++S PG+ I L
Sbjct: 536 FCHENLLNYKTMSRAVSIRAQLKRYLERFGIRVDETLASGKTRGASPGVTGEQIRRCLTT 595
Query: 912 GLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
G + AR++ +G F GG + HP SL F +K D +++ E+
Sbjct: 596 GYFAHAARMQA---DGT-FQTVQGGTTLHAHPSSLMFN---RKAD---WVIFHEVMETGA 645
Query: 972 GMHVRNCTVVGPLPLLLLATE 992
+R+ + V LL A +
Sbjct: 646 KTFIRDISKVEKCWLLEYAPD 666
Score = 318 (117.0 bits), Expect = 6.7e-69, Sum P(2) = 6.7e-69
Identities = 88/237 (37%), Positives = 129/237 (54%)
Query: 186 SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW-SKGETCKIVCTQPR 244
S LPI+ KD + V+SN V ++ G+TG GKTTQ+PQFL + W S G+ + TQPR
Sbjct: 19 SLLPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGV--TQPR 76
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
RI+AT+VA R++ E G +G +GY IR E + + I F T+G+L+R
Sbjct: 77 RIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIR----------- 125
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
EA P +S + ++VDE HER +D +L +++ + P LR+I+ SATL A++F
Sbjct: 126 EALVDPL---LSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQF 182
Query: 365 SQYF----GGC------P------VIQVPGFTYPVKSFYLEDVLS-ILKSAESNHLD 404
+F GG P ++ + G TYP+ YLE L+ A S LD
Sbjct: 183 LAFFSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLD 239
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 413 (150.4 bits), Expect = 7.3e-69, Sum P(2) = 7.3e-69
Identities = 112/377 (29%), Positives = 190/377 (50%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQ 606
++Q L+ + + G IL+F+PG EDI T D+++ + + ++P++S +PS
Sbjct: 729 VKQSLQ-VHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDL 787
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F++ P G RK I++TNIAET++T+D +++VIDSG K K ++P + LQ +S
Sbjct: 788 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 847
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
+A+A QR+GRAGR G C+ LY+Q + L VPEI+R + + L +K L
Sbjct: 848 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL----G 903
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
++D LQ +DPP + N++ L +GAL +T G + + P +SKML +
Sbjct: 904 VQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 963
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
M C L + F P E+ KF + +SD L + +
Sbjct: 964 CDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVP-----ESDHLTYLNVYLQ 1018
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
WKN W C+ +F+ + M + +R QL+ +++ ++SC + I
Sbjct: 1019 WKNNNY--STIW-CNDHFIHAKAMRKVREVRAQLKDIMVQQRM---SLASCGTDW---DI 1069
Query: 905 IHAVLMAGLYPMVARLR 921
+ + A + A+L+
Sbjct: 1070 VRKCICAAYFHQAAKLK 1086
Score = 381 (139.2 bits), Expect = 7.3e-69, Sum P(2) = 7.3e-69
Identities = 98/271 (36%), Positives = 156/271 (57%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + I+E+R LPI + + + + + N +V++ GETG GKTTQ+ Q+L + ++ +
Sbjct: 521 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYT--DY 578
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I CTQPRR++A SVA+R+S E G N+G+ +GY IR E +++ I + T+G+LLR
Sbjct: 579 GMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLR-- 636
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+EA D SA II+DE HER +D + ++R+++ L+LI+
Sbjct: 637 -----ESLREAD----LDHYSA---IIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 684
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL----ED-VLSILKSAESNHLDSAS--- 407
SAT+DAD+F+ +FG P+ +PG T+PV + ED V + +K + HL A
Sbjct: 685 SATMDADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDI 744
Query: 408 -LIVPN-EDPELTE----ENKSTLDEAISLA 432
+ +P ED E+T E+ L+ A +LA
Sbjct: 745 LIFMPGQEDIEVTSDQIVEHLEELENAPALA 775
Score = 40 (19.1 bits), Expect = 5.3e-33, Sum P(2) = 5.3e-33
Identities = 20/94 (21%), Positives = 40/94 (42%)
Query: 129 GEKLDANQSRKSDKTRGKRVD--IFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERS 186
G LD+ KT+ + +F P + + + + + R E++ + E++
Sbjct: 15 GTNLDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRREREE--KDDGEDKK 72
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQ 220
K ISS+KD S D G+ G++++
Sbjct: 73 KSRISSYKDWEESKDDQKDAEE-DGDEQAGRSSR 105
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 436 (158.5 bits), Expect = 8.1e-69, Sum P(3) = 8.1e-69
Identities = 123/395 (31%), Positives = 201/395 (50%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 737 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 794
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 795 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 854
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 855 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 913
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 914 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 969
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P + K+A A + + A
Sbjct: 970 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP----KDKQALADQ-KKAK 1024
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1025 FHQPEGDHLTLLAVYNSWKNNKF--SNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1081
Query: 888 IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRP 922
DV SC A V + + +G + A+ P
Sbjct: 1082 ---DVVSCG-KATVR--VQKAICSGFFRNAAKKDP 1110
Score = 363 (132.8 bits), Expect = 8.1e-69, Sum P(3) = 8.1e-69
Identities = 89/229 (38%), Positives = 131/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 548 ILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRG--KIGC 605
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 606 TQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------- 658
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D+ I++DE HER ++D + +++ + ++LI+ SATLD
Sbjct: 659 ----ECLIDP---DLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLD 711
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 712 AVKFSQYFYEAPIFTIPGRTYPVEVLYT-------KEPETDYLD-ASLI 752
Score = 44 (20.5 bits), Expect = 8.1e-69, Sum P(3) = 8.1e-69
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 71 TSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSL 104
T + + + S +K + E DK KE+ P+L
Sbjct: 78 TMRPPAKASTSKASFPAAKPKNEKDKLKELFPAL 111
Score = 43 (20.2 bits), Expect = 7.0e-35, Sum P(3) = 7.0e-35
Identities = 26/119 (21%), Positives = 47/119 (39%)
Query: 244 RRISATSVAERISVERGENIGDN----IGYKIRLESKG----GKHSSIVFCTNGVLLRLL 295
+++ S+ ++ E ++G N + I L K G S++V NG
Sbjct: 10 KKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTAFDGFKSALV--KNGADFTDS 67
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
+ + RL + PAK S + +E+D+ + A+ R P P R +L
Sbjct: 68 LIGNLLRLIQTMRPPAKASTSKASFPAAKPKNEKDKLKELFPALCR---PDNPTTRNML 123
Score = 41 (19.5 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 395 LKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFD 439
LK E +L S + D L +K + ISLA N FD
Sbjct: 9 LKKLE--YLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTAFD 51
Score = 39 (18.8 bits), Expect = 5.5e-35, Sum P(3) = 5.5e-35
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLK 491
GL + L +GRV +V ++S G ++K
Sbjct: 283 GLVHISELRREGRVANVADVVSKGQRVKVK 312
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 410 (149.4 bits), Expect = 8.2e-69, Sum P(2) = 8.2e-69
Identities = 123/366 (33%), Positives = 192/366 (52%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKF---VIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVFL G E+I + +L + R SK +++P+++ +PS Q ++F+ PPG
Sbjct: 610 GDILVFLTGQEEIEAACE-MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 668
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK++++TNIAET++TI+ ++YV+D G K+KSY+P + +L + SKASA QRAGRAG
Sbjct: 669 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 728
Query: 679 RCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDP 736
R AG C+ LY+ L + VPEI+R + + L +K L I D + LDP
Sbjct: 729 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSL----GIHDLMHFDFLDP 784
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P T+ A+ L +GAL+ ++T G K+ L V P++SKM+ + C + LT+
Sbjct: 785 PPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTV 844
Query: 797 ACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A + ++ P +K A A+ L GG D L ++ + W + Q
Sbjct: 845 AAMLSVNN--SIFYRPKDKVVHADNARVNFF-LPGG--DHLVLLNVYTQWAESGYSSQ-- 897
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN-ARVPGIIHAVLMAGLY 914
W C + FV M +R+QL+ L + + +SSC + RV + AG +
Sbjct: 898 W-CYENFVQFRSMRRARDVREQLEGLLER---VEVGLSSCQGDYIRV----RKAITAGYF 949
Query: 915 PMVARL 920
ARL
Sbjct: 950 YHTARL 955
Score = 381 (139.2 bits), Expect = 8.2e-69, Sum P(2) = 8.2e-69
Identities = 78/203 (38%), Positives = 127/203 (62%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ F++ + + + +QV++I GETG GKTTQ+PQ+L E ++K + KI CTQPR
Sbjct: 397 RRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTK-KGMKIACTQPR 455
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A SVA R++ E G +G+ +GY IR E + + + + T+G+LLR +S+
Sbjct: 456 RVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE------ 509
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
P D+++ + ++VDE HER ++D + +I+D+ P L++++ SATLD RF
Sbjct: 510 -----P---DLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARF 561
Query: 365 SQYFGGCPVIQVPGFTYPVKSFY 387
S +F PV ++PG +PV FY
Sbjct: 562 STFFDDAPVFRIPGRRFPVDIFY 584
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 410 (149.4 bits), Expect = 8.3e-69, Sum P(2) = 8.3e-69
Identities = 123/366 (33%), Positives = 192/366 (52%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKF---VIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVFL G E+I + +L + R SK +++P+++ +PS Q ++F+ PPG
Sbjct: 613 GDILVFLTGQEEIEAACE-MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK++++TNIAET++TI+ ++YV+D G K+KSY+P + +L + SKASA QRAGRAG
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 679 RCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDP 736
R AG C+ LY+ L + VPEI+R + + L +K L I D + LDP
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSL----GIHDLMHFDFLDP 787
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P T+ A+ L +GAL+ ++T G K+ L V P++SKM+ + C + LT+
Sbjct: 788 PPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTV 847
Query: 797 ACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A + ++ P +K A A+ L GG D L ++ + W + Q
Sbjct: 848 AAMLSVNN--SIFYRPKDKVVHADNARVNFF-LPGG--DHLVLLNVYTQWAESGYSSQ-- 900
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN-ARVPGIIHAVLMAGLY 914
W C + FV M +R+QL+ L + + +SSC + RV + AG +
Sbjct: 901 W-CYENFVQFRSMRRARDVREQLEGLLER---VEVGLSSCQGDYIRV----RKAITAGYF 952
Query: 915 PMVARL 920
ARL
Sbjct: 953 YHTARL 958
Score = 381 (139.2 bits), Expect = 8.3e-69, Sum P(2) = 8.3e-69
Identities = 77/203 (37%), Positives = 128/203 (63%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ F++ + + + ++QV++I GETG GKTTQ+PQ+L E ++K + KI CTQPR
Sbjct: 400 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTK-KGMKIACTQPR 458
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A SVA R++ E G +G+ +GY IR E + + + + T+G+LLR +S+
Sbjct: 459 RVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE------ 512
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
P D+++ + ++VDE HER ++D + +I+D+ P L++++ SATLD RF
Sbjct: 513 -----P---DLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARF 564
Query: 365 SQYFGGCPVIQVPGFTYPVKSFY 387
S +F P+ ++PG +PV FY
Sbjct: 565 STFFDDAPIFRIPGRRFPVDIFY 587
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 446 (162.1 bits), Expect = 8.6e-69, Sum P(2) = 8.6e-69
Identities = 121/360 (33%), Positives = 196/360 (54%)
Query: 523 SDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGA-ILVFLPGWEDINKTRDRL 581
++ +++ +D L TV ++ L ++ + K + EDG ILVFL G ++I L
Sbjct: 260 TEEIQKDYVDAALITVL-QIHIAHLTDKSINK--EEEEDGGDILVFLTGRDEIENLEKLL 316
Query: 582 LAN-PFFRDTSKFVII-PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L P SK +I+ P+ S +P QQ KVF++ P G RK+IL+TNIAET++TI+ + Y
Sbjct: 317 LDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRY 376
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
V+DSG +K K ++P + +L +SKASAKQR GRAGR G CY LY+Q L
Sbjct: 377 VVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDT 436
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIE-DFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
+PEIKR I + LQ+K + N + DFL+ PPV+ I++ + +L + A+S +
Sbjct: 437 SSIPEIKRSNIANVILQLKTIGINDILSFDFLES---PPVASVIKS-LELLFCLDAISDN 492
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
+TELG+K+ + P+ SK L +I +C + L + F +P EKK+
Sbjct: 493 GSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVESIF---FTPKEKKKE 549
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
++ + D + + F ++ +K + Q+ W C +F++ M +L + +QL
Sbjct: 550 VEDVKKI--FFSPDGDHITFLNVFREFQKSKPQQQQQW-CFDHFINLKSMIKVLNVFEQL 606
Score = 333 (122.3 bits), Expect = 8.6e-69, Sum P(2) = 8.6e-69
Identities = 75/229 (32%), Positives = 130/229 (56%)
Query: 167 SLTSRIEKDANL-RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
+L +++E + ++I ++ LP+ + KD + + V+I ETG GKTTQ+PQ+L
Sbjct: 51 NLKNQLEIPKEIPKEIKLQKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYL 110
Query: 226 LEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVF 285
E+ + I TQPRR++A S+++R+S E G +GD +GY +R + K + + + +
Sbjct: 111 YENGYKDNGI--IAITQPRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKY 168
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
T+G+L+R EA +S + II+DE HER +D + +++ +
Sbjct: 169 MTDGMLVR-----------EAM---LDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQK 214
Query: 346 SYPH---LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
L++I+MSATLDA+ FSQYF PV+ + G +PV+ +Y E++
Sbjct: 215 RREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEI 263
Score = 46 (21.3 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPIS 191
PK EI ++ ESL KDA L+ E + + IS
Sbjct: 59 PKEIPKEIKLQKESLPVFTAKDALLKNFKEHSTVIIIS 96
Score = 38 (18.4 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 379 FTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISL 431
FT K +EDV I S + +H+ ++ + + ++ + D I+L
Sbjct: 541 FTPKEKKKEVEDVKKIFFSPDGDHITFLNVFREFQKSKPQQQQQWCFDHFINL 593
Score = 37 (18.1 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 81 RRVSVCKSKKRVETDKGKEI 100
RRV+ KRV + G E+
Sbjct: 127 RRVAAVSISKRVSQEMGVEL 146
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 431 (156.8 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 119/380 (31%), Positives = 197/380 (51%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKT----RDRLLANPFFRDTSKFVIIPLHSMVP 603
++Q+L I + G ILVF+ G EDI T R+RL A D K I+P++S +P
Sbjct: 499 VQQVLN-IHVSMGTGDILVFMTGQEDIEVTCELVRERLDA---LNDPPKLSILPIYSQMP 554
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+ Q K+F R PPG RK I++TNIAET++T+D ++YV+D+G K K Y+P + TLQ +
Sbjct: 555 ADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQIT 614
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKRIPIEELCLQVKLLDP 722
+S+A+A QR+GRAGR G + L+++ Q +PEI+R + L +K L
Sbjct: 615 PISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSL-- 672
Query: 723 NCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
++D L +DPP T+ ++ L +GAL +T+LG K+ + P ++K++
Sbjct: 673 --GVKDMLDFDFMDPPPQDTMTTSLFDLWALGALDNLGDMTDLGRKMNFFPMDPPLAKLI 730
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A C + +T+ + F P E+ A KF + +SD L +
Sbjct: 731 IMAEEYGCTEEMITIVSMLSVPNVFYRPKERQEESDAAREKF-----FVPESDHLTFLHV 785
Query: 842 FECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARV 901
+ WK +AW CS++F+ S + +R QL +++K + D+ SC + V
Sbjct: 786 YSQWK--ANGHSDAW-CSRHFLHSKSLRRAKEVRDQL-LDIMKTQKM--DIVSCGTDWDV 839
Query: 902 PGIIHAVLMAGLYPMVARLR 921
+ + +G Y A+++
Sbjct: 840 ---VRRCICSGYYHQAAKVK 856
Score = 357 (130.7 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 83/205 (40%), Positives = 121/205 (59%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ I E+R LP + ++ + + NQV+++ GETG GKTTQ+ QFL E + G+ I
Sbjct: 294 KSIREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGY--GQLGMI 351
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
CTQPRR++A SVA+R+S E +G +GY IR E K + I + T+GVLLR
Sbjct: 352 GCTQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLR----- 406
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
E+ N+P D S II+DE HER +D ++ + + +L L+LI+ SAT
Sbjct: 407 ------ESLNEPDLDRYSC---IIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSAT 457
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPV 383
++A RFS +FGG P +PG T+PV
Sbjct: 458 MNAKRFSDFFGGAPDFTIPGRTFPV 482
Score = 88 (36.0 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 34/141 (24%), Positives = 62/141 (43%)
Query: 812 PNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNML 871
P E++ + A E + +SD L + + WK +AW CS++F+ S +
Sbjct: 758 PKERQEESDAARE--KFFVPESDHLTFLHVYSQWK--ANGHSDAW-CSRHFLHSKSLRRA 812
Query: 872 LGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
+R QL +++K + D+ SC + V + + +G Y A++ K ++
Sbjct: 813 KEVRDQL-LDIMKTQKM--DIVSCGTDWDV---VRRCICSGYYHQAAKV----KGIGEYI 862
Query: 932 ETAGGAKVRLHPHSLNFKLSF 952
V+LHP S + L F
Sbjct: 863 NLRTSVTVQLHPTSALYGLGF 883
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 508 (183.9 bits), Expect = 1.3e-68, Sum P(3) = 1.3e-68
Identities = 117/332 (35%), Positives = 179/332 (53%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G +LVFL G +I+ + A + T ++V++PLHS + Q KVF PPG R
Sbjct: 377 ERGDLLVFLSGMAEISAVLEP--AQAYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVR 434
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K ILSTNIAET++TID + +V+DSG++KE SYDP + LQ W+S+ASA+QR GRAGR
Sbjct: 435 KCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGR 494
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
G+C+ LY++ + + VPEI+R+ ++ L LQ+K + + F ++PP
Sbjct: 495 TGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVG-DPRTF--PFIEPPPP 551
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++ AI+ L+D GAL E +T +G L L V ++ KML + +P LT+A A
Sbjct: 552 TSLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAA 611
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAK-QRGQEA--W 856
+ PFT N + AT E Q D ++ F W K +RG+ + W
Sbjct: 612 LSVQTPFTRSAQSNPECAATRRPLE-----SDQGDPFTLLNVFNTWVQVKSERGRNSRKW 666
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
C + + + +R+Q + L +G +
Sbjct: 667 -CRHRGIEEHRLYEMANLRRQFKELLEDHGLL 697
Score = 286 (105.7 bits), Expect = 1.3e-68, Sum P(3) = 1.3e-68
Identities = 60/150 (40%), Positives = 88/150 (58%)
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
+ CTQPRRI+ S+A+R+ E G +GY+IR ES + IVF T G+LLR
Sbjct: 207 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR---- 262
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+ +P+ L IVDE+HER ++DF+L +++ +LP P L+++LMSA
Sbjct: 263 -------QMQREPSLPQYQVL---IVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSA 312
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
T++ FS YFG PV+QVPG +P+ Y
Sbjct: 313 TINISLFSSYFGNAPVVQVPGRLFPITVVY 342
Score = 235 (87.8 bits), Expect = 2.9e-63, Sum P(3) = 2.9e-63
Identities = 51/117 (43%), Positives = 74/117 (63%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
L ++ ER+ LPI+ + I + +QVV+++G+TGCGK+TQVPQ+LL + G C
Sbjct: 152 LAKLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLL----AAG--CS 205
Query: 238 -IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
+ CTQPRRI+ S+A+R+ E G +GY+IR ES + IVF T G+LLR
Sbjct: 206 HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR 262
Score = 52 (23.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 482 LSLGADCQLKAKDGRTALQLGEQENQPEV--AQI-IKKHMENALSDSMKQQ 529
L DC DG LQL + E+ + A + ++ H E+AL + Q
Sbjct: 911 LDTNGDCSRLVADGWLELQLADTESAVRLLAASLRLRAHWESALDRQLAHQ 961
Score = 41 (19.5 bits), Expect = 1.3e-68, Sum P(3) = 1.3e-68
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 904 IIHAVLMAGLYPMVARLRP---PHKNGRRFVETAGGAKVRLHP 943
++ VL GLYP +A P K+ + T V LHP
Sbjct: 799 LLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQTKQGVVLHP 841
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 420 (152.9 bits), Expect = 1.5e-68, Sum P(2) = 1.5e-68
Identities = 124/391 (31%), Positives = 207/391 (52%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLA-NPFFRDT-SKFV 594
T PE L + +I + G ILVFL G E+I+ + + L + D+ + V
Sbjct: 695 TKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELV 754
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+P++S +PS Q ++F+ PPG RK++++TNIAET++TID + YV+D G +K+ +DP
Sbjct: 755 ILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPK 814
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ--LRAASLPDFQVPEIKRIPIEE 712
+ +L + +S+A A+QR+GRAGR G CY LY++ R LP +PEI+R +
Sbjct: 815 LGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPS-PIPEIQRQNLSH 873
Query: 713 LCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALS-LDEK--VTELGEKL 768
L +K + I D L +DPP + T+ I LQ++ ALS LD++ +T LG K+
Sbjct: 874 TILMLKAM----GINDLLNFDFMDPPPAQTM---IAALQNLYALSALDDEGLLTPLGRKM 926
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
+ P +SK+L ++ + C + L++ + ++ P EK++ A + A
Sbjct: 927 ADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWS---RPREKQQE--ADRQRAQF 981
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
+SD L ++ + WK R + W C ++++ + M +RKQL L+
Sbjct: 982 ANPESDHLTLLNVYTTWK--MNRCSDNW-CYEHYIQARGMRRAEDVRKQL-IRLMDRYRH 1037
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVAR 919
P V SC + I+ A L +G + VA+
Sbjct: 1038 P--VVSCGRKREL--ILRA-LCSGYFTNVAK 1063
Score = 370 (135.3 bits), Expect = 1.5e-68, Sum P(2) = 1.5e-68
Identities = 85/228 (37%), Positives = 132/228 (57%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQ 242
E+R LP+ + V NQ++++ GETG GKTTQ+ Q+L E ++ ++ I CTQ
Sbjct: 505 EQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTS-DSKMIGCTQ 563
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRR++A SVA+R++ E G +G+ +GY IR E K + + I + T+G+L R
Sbjct: 564 PRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQR--------- 614
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
E P +S + II+DE HER +D + +++ + P L+LI+ SATLDA+
Sbjct: 615 --ECLVDPL---LSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAE 669
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
RFS YF CP+ +PG +YPV+ Y K E+++LD+A + V
Sbjct: 670 RFSSYFYKCPIFTIPGRSYPVEIMYT-------KQPEADYLDAALMTV 710
Score = 41 (19.5 bits), Expect = 5.9e-34, Sum P(2) = 5.9e-34
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 42 SKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSS--GRGKQRRVSVCKSKKRVETDKG 97
SK+++ + + + + + G TS S G + RRV+ KRV + G
Sbjct: 524 SKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVG 581
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 408 (148.7 bits), Expect = 1.6e-68, Sum P(4) = 1.6e-68
Identities = 112/366 (30%), Positives = 191/366 (52%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKF---VIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVF G E+I +T + +L + +K +I P+++ +PS Q K+F+ P G
Sbjct: 613 GDILVFFTGQEEI-ETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA 671
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK++L+TNIAET++TID + YV+D G K KSY+P + +L + +SKASA QRAGRAG
Sbjct: 672 RKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAG 731
Query: 679 RCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDP 736
R G CY LY+ + L + VPE++R + + L +K L I D + +DP
Sbjct: 732 RTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSL----GIHDLINFDFMDP 787
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P + + ++ +L +GAL+ ++T+ G ++ + P++SKM+ + C D +++
Sbjct: 788 PPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISI 847
Query: 797 ACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A ++ P +K+ A A+ + G D +A++ + WK Q
Sbjct: 848 AAMLSIGG--SIFYRPKDKQVHADNARMNFHT--GNVGDHIALLKVYSSWKETNFSTQ-- 901
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYP 915
W C + ++ M +R QL+ L + + D+SS N + ++AG +P
Sbjct: 902 W-CYENYIQVRSMKRARDIRDQLEGLLER---VEIDISS---NLNELDSVRKSIVAGFFP 954
Query: 916 MVARLR 921
A+L+
Sbjct: 955 HTAKLQ 960
Score = 383 (139.9 bits), Expect = 1.6e-68, Sum P(4) = 1.6e-68
Identities = 86/251 (34%), Positives = 146/251 (58%)
Query: 160 EIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTT 219
E AM + + + + L ++ E R LPI +++D + V+ +QV++I G+TG GKTT
Sbjct: 376 EDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTT 435
Query: 220 QVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK 279
Q+PQ+L E ++K K+ CTQPRR++A SVA R++ E G +G +GY IR E
Sbjct: 436 QIPQYLHEAGYTKRG--KVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSD 493
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
+ + + T+G+LLR L+ + P D+++ + +IVDE HER +D + +
Sbjct: 494 KTVLKYMTDGMLLRELLGE-----------P---DLASYSVVIVDEAHERTLSTDILFGL 539
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAE 399
++D+ P L+L++ SAT+DA++FS YF P+ PG YPV+ Y + E
Sbjct: 540 VKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTS-------APE 592
Query: 400 SNHLDSASLIV 410
++++D+A + +
Sbjct: 593 ADYMDAAIVTI 603
Score = 53 (23.7 bits), Expect = 1.6e-68, Sum P(4) = 1.6e-68
Identities = 29/125 (23%), Positives = 45/125 (36%)
Query: 66 KKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDD 125
KK G + +S G R S +K E D G E + + ++L H D
Sbjct: 130 KKSGQSDESDGEVAVREDSRHVRRKVSEEDDGSESEEERVRDQKER---EELEQHLKDRD 186
Query: 126 GEPGEKLDANQSRKSDKTRG-KRVDIFCKPKMSKAEIAMKVESLTSRIEKDAN-LRQIVE 183
KL K +K +R + K + + E L R +K + LR +E
Sbjct: 187 TARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSRQEYLKKREQKKLDELRDEIE 246
Query: 184 ERSKL 188
+ L
Sbjct: 247 DEQYL 251
Score = 44 (20.5 bits), Expect = 1.4e-67, Sum P(4) = 1.4e-67
Identities = 21/86 (24%), Positives = 41/86 (47%)
Query: 107 SEGSKLVL-QDLFTHYPPDDGEPG----EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEI 161
+E + LV Q + DD E +K ++SRKSDK + + + S E+
Sbjct: 83 AEAAMLVRKQKTYALLDADDDEDEVVVEKKSSVSESRKSDKGKKRFRKKSGQSDESDGEV 142
Query: 162 AMKVES--LTSRIEKDANLRQIVEER 185
A++ +S + ++ ++ + + EER
Sbjct: 143 AVREDSRHVRRKVSEEDDGSESEEER 168
Score = 40 (19.1 bits), Expect = 1.6e-68, Sum P(4) = 1.6e-68
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 1034 QHGENVMSSPDKSVTVVVDRWLYFGSTAL 1062
+H + V P+ ++ V+ RW+ + L
Sbjct: 969 KHPQTVHIHPNSGLSQVLPRWVVYHELVL 997
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 410 (149.4 bits), Expect = 1.7e-68, Sum P(2) = 1.7e-68
Identities = 123/366 (33%), Positives = 192/366 (52%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKF---VIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVFL G E+I + +L + R SK +++P+++ +PS Q ++F+ PPG
Sbjct: 613 GDILVFLTGQEEIEAACE-MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK++++TNIAET++TI+ ++YV+D G K+KSY+P + +L + SKASA QRAGRAG
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 679 RCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDP 736
R AG C+ LY+ L + VPEI+R + + L +K L I D + LDP
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSL----GIHDLMHFDFLDP 787
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P T+ A+ L +GAL+ ++T G K+ L V P++SKM+ + C + LT+
Sbjct: 788 PPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTV 847
Query: 797 ACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A + ++ P +K A A+ L GG D L ++ + W + Q
Sbjct: 848 AAMLSVNN--SIFYRPKDKVVHADNARVNFF-LPGG--DHLVLLNVYTQWAESGYSSQ-- 900
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN-ARVPGIIHAVLMAGLY 914
W C + FV M +R+QL+ L + + +SSC + RV + AG +
Sbjct: 901 W-CYENFVQFRSMRRARDVREQLEGLLER---VEVGLSSCQGDYIRV----RKAITAGYF 952
Query: 915 PMVARL 920
ARL
Sbjct: 953 YHTARL 958
Score = 378 (138.1 bits), Expect = 1.7e-68, Sum P(2) = 1.7e-68
Identities = 77/203 (37%), Positives = 128/203 (63%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ F++ + + V ++Q+++I GETG GKTTQ+PQ+L E +++ + KI CTQPR
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQ-KGMKIACTQPR 458
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A SVA R++ E G +G+ +GY IR E + + + + T+G+LLR +S+
Sbjct: 459 RVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE------ 512
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
P D+++ + ++VDE HER ++D + +I+D+ P L++++ SATLD RF
Sbjct: 513 -----P---DLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARF 564
Query: 365 SQYFGGCPVIQVPGFTYPVKSFY 387
S +F PV ++PG +PV FY
Sbjct: 565 STFFDDAPVFRIPGRRFPVDIFY 587
Score = 44 (20.5 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 396 KSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSN 435
K A + ++ +L+ N L E+++ + +EA+ A S+
Sbjct: 78 KPARAAEREARALLEKNRSYRLLEDSEESSEEAVGRAGSS 117
Score = 37 (18.1 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 503 EQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDL 545
E+E + EV + KK + + K + D++ T L DL
Sbjct: 137 EEEEEEEVPEKGKKTTGGSKPQTEKPESEDEWERTERERLQDL 179
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 410 (149.4 bits), Expect = 1.7e-68, Sum P(2) = 1.7e-68
Identities = 123/366 (33%), Positives = 192/366 (52%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKF---VIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVFL G E+I + +L + R SK +++P+++ +PS Q ++F+ PPG
Sbjct: 613 GDILVFLTGQEEIEAACE-MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK++++TNIAET++TI+ ++YV+D G K+KSY+P + +L + SKASA QRAGRAG
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 679 RCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDP 736
R AG C+ LY+ L + VPEI+R + + L +K L I D + LDP
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSL----GIHDLMHFDFLDP 787
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P T+ A+ L +GAL+ ++T G K+ L V P++SKM+ + C + LT+
Sbjct: 788 PPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTV 847
Query: 797 ACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A + ++ P +K A A+ L GG D L ++ + W + Q
Sbjct: 848 AAMLSVNN--SIFYRPKDKVVHADNARVNFF-LPGG--DHLVLLNVYTQWAESGYSSQ-- 900
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN-ARVPGIIHAVLMAGLY 914
W C + FV M +R+QL+ L + + +SSC + RV + AG +
Sbjct: 901 W-CYENFVQFRSMRRARDVREQLEGLLER---VEVGLSSCQGDYIRV----RKAITAGYF 952
Query: 915 PMVARL 920
ARL
Sbjct: 953 YHTARL 958
Score = 378 (138.1 bits), Expect = 1.7e-68, Sum P(2) = 1.7e-68
Identities = 77/203 (37%), Positives = 128/203 (63%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ F++ + + V ++Q+++I GETG GKTTQ+PQ+L E +++ + KI CTQPR
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQ-KGMKIACTQPR 458
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A SVA R++ E G +G+ +GY IR E + + + + T+G+LLR +S+
Sbjct: 459 RVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE------ 512
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
P D+++ + ++VDE HER ++D + +I+D+ P L++++ SATLD RF
Sbjct: 513 -----P---DLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARF 564
Query: 365 SQYFGGCPVIQVPGFTYPVKSFY 387
S +F PV ++PG +PV FY
Sbjct: 565 STFFDDAPVFRIPGRRFPVDIFY 587
Score = 44 (20.5 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 396 KSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSN 435
K A + ++ +L+ N L E+++ + +EA+ A S+
Sbjct: 78 KPARAAEREARALLEKNRSYRLLEDSEESSEEAVGRAGSS 117
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 437 (158.9 bits), Expect = 2.1e-68, Sum P(3) = 2.1e-68
Identities = 114/306 (37%), Positives = 161/306 (52%)
Query: 559 SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
SE ++LVFLPG +IN + LL N + + + PLHS V +Q VF P PG
Sbjct: 384 SERSSVLVFLPGLGEINYMHE-LLTNMIHK---RLQVYPLHSSVTLEEQNNVFLSPVPGY 439
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKIILSTNIAE+++T+ DV YVID + D N +L+ SW SK S QR GRAG
Sbjct: 440 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAG 499
Query: 679 RCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
R G CY L + +++PD VPE+ R P+ L+VKLLD L L PP
Sbjct: 500 RVSKGYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLDMG-EPRALLATALSPP 558
Query: 738 VSVTIRNAIIVLQDIGALSL-----DE-----KVTELGEKLGCLSVHPLMSKMLFFAILM 787
I I++L+++GAL++ DE ++T LG L L V + K++ +
Sbjct: 559 SLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVF 618
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
CLD L +A A ++ FT+P + F +S +SD LA++ AF W+
Sbjct: 619 GCLDECLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSS----RSDCLALVEAFRAWQA 674
Query: 848 AKQRGQ 853
+QRG+
Sbjct: 675 CRQRGE 680
Score = 362 (132.5 bits), Expect = 2.1e-68, Sum P(3) = 2.1e-68
Identities = 102/313 (32%), Positives = 163/313 (52%)
Query: 168 LTSRIEKDANLRQIVEERSK---LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
L S + K +N+ I E K LPI+ K+ + S ++SN VV+I G TG GK+TQ+PQ+
Sbjct: 111 LRSPLAKLSNVACIPETTYKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQY 170
Query: 225 LLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
+L+H + C IV TQPR+I A+S+A IS ER +G +GY++ LE + + ++
Sbjct: 171 VLDHYTQRSAFCNIVVTQPRKIGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRLI 230
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
+ T GVLL+ +VS AK + THI +DE+HER DF+L ++R +L
Sbjct: 231 YMTTGVLLQKIVS-------------AKS-LMEFTHIFIDEVHERTEEMDFLLLVVRKLL 276
Query: 345 PSYPH-LRLILMSATLDADRFSQYFGGCPV---------IQVPGFTYPVKSFYLEDVLSI 394
+ ++++LMSAT++ +F+ YF PV +V G + ++ +YL D+ I
Sbjct: 277 RTNSRFVKVVLMSATINCKQFADYFA-VPVQNKMNPAYVFEVEGKPHAIEEYYLNDLGHI 335
Query: 395 LKSAESNHLDSASLIVPNEDPELTEENKSTLD-----EAISLAWSNDEF--DMLLELVSL 447
S L+ ++ + E+ D E+ + WS +F + LV L
Sbjct: 336 YHSGLPYRLEEP--VITKDVYEVAVSLIQMFDDLDMKESGNKTWSGAQFVSERSSVLVFL 393
Query: 448 EGSPNVYNYQHTL 460
G + NY H L
Sbjct: 394 PGLGEI-NYMHEL 405
Score = 43 (20.2 bits), Expect = 2.1e-68, Sum P(3) = 2.1e-68
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 945 SLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
+L FK+ K ++ E GG H R +VG PLL+
Sbjct: 1009 ALEFKIC-KMRPSAKSLICGE--HWSGGAHGRFAALVGGCPLLV 1049
Score = 37 (18.1 bits), Expect = 9.1e-68, Sum P(3) = 9.1e-68
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 892 VSSCSHNARVPGIIHAVLMAGLY 914
V C +V I+H+VL +Y
Sbjct: 1042 VGGCPLLVKVFSIVHSVLHVDVY 1064
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 512 (185.3 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 117/332 (35%), Positives = 179/332 (53%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G +LVFL G +I+ + A + T ++V++PLHS + Q KVF PPG R
Sbjct: 377 ERGDLLVFLSGMAEISAVLEA--AQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVR 434
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K ILSTNIAET++TID + +V+DSG++KE SYDP + LQ W+S+ASA+QR GRAGR
Sbjct: 435 KCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGR 494
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
G+C+ LY++ + + VPEI+R+ ++ L LQ+K + + F ++PP
Sbjct: 495 TGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVG-DPRTF--PFIEPPPP 551
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++ AI+ L+D GAL E +T +G L L V ++ KML + ++P LT+A A
Sbjct: 552 ASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAA 611
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW---KNAKQRGQEAW 856
+ PFT S AA+ L S Q D + F W K+ + R W
Sbjct: 612 LSVQSPFTR--SAQSSPECAAARRPLES---DQGDPFTLFNVFNAWVQVKSERSRNSRKW 666
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
C + + + + +R+Q + L +G +
Sbjct: 667 -CRRRGIEEHRLYEMANLRRQFKELLEDHGLL 697
Score = 282 (104.3 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 60/150 (40%), Positives = 88/150 (58%)
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
+ CTQPRRI+ S+A+R+ E G +GY+IR ES + IVF T G+LLR
Sbjct: 207 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR---- 262
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+ +P+ L IVDE+HER ++DF+L +++ +LP+ P L++ILMSA
Sbjct: 263 -------QIQREPSLPQYEVL---IVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSA 312
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
T++ FS YF PV+QVPG +P+ Y
Sbjct: 313 TINISLFSSYFSNAPVVQVPGRLFPITVVY 342
Score = 243 (90.6 bits), Expect = 3.1e-64, Sum P(3) = 3.1e-64
Identities = 51/116 (43%), Positives = 75/116 (64%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
L ++ ER+ LPI+ + + I T+ +QVV+++G+TGCGK+TQVPQ+LL +S
Sbjct: 152 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----- 206
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
+ CTQPRRI+ S+A+R+ E G +GY+IR ES + IVF T G+LLR
Sbjct: 207 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR 262
Score = 46 (21.3 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 482 LSLGADCQLKAKDGRTALQLGEQENQPEV--AQI-IKKHMENALSDSM----KQQLLDKY 534
L DC DG LQL + E+ + A + ++ E+AL + +QQL ++
Sbjct: 911 LDTNGDCSRLVADGWLELQLADSESAIRLLAASLRLRARWESALDRQLAHQAQQQLEEEE 970
Query: 535 LAT-VNPELIDLVLIEQLLR 553
T V+P+ + L ++LL+
Sbjct: 971 EDTPVSPKEV-ATLSKELLQ 989
Score = 38 (18.4 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 904 IIHAVLMAGLYPMVA---RLRPPHKNGRRFVETAGGAKVRLHP 943
++ VL GLYP +A K+ + T LHP
Sbjct: 799 LLKLVLGRGLYPQLAVPDAFNSSRKDSDQIFHTQAKQGAVLHP 841
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 410 (149.4 bits), Expect = 2.7e-68, Sum P(2) = 2.7e-68
Identities = 123/366 (33%), Positives = 192/366 (52%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKF---VIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVFL G E+I + +L + R SK +++P+++ +PS Q ++F+ PPG
Sbjct: 609 GDILVFLTGQEEIEAACE-MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 667
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK++++TNIAET++TI+ ++YV+D G K+KSY+P + +L + SKASA QRAGRAG
Sbjct: 668 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 727
Query: 679 RCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDP 736
R AG C+ LY+ L + VPEI+R + + L +K L I D + LDP
Sbjct: 728 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSL----GIHDLMHFDFLDP 783
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P T+ A+ L +GAL+ ++T G K+ L V P++SKM+ + C + LT+
Sbjct: 784 PPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTV 843
Query: 797 ACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A + ++ P +K A A+ L GG D L ++ + W + Q
Sbjct: 844 AAMLSVNN--SIFYRPKDKVVHADNARVNFF-LPGG--DHLVLLNVYTQWAESGYSSQ-- 896
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN-ARVPGIIHAVLMAGLY 914
W C + FV M +R+QL+ L + + +SSC + RV + AG +
Sbjct: 897 W-CYENFVQFRSMRRARDVREQLEGLLER---VEVGLSSCQGDYIRV----RKAITAGYF 948
Query: 915 PMVARL 920
ARL
Sbjct: 949 YHTARL 954
Score = 376 (137.4 bits), Expect = 2.7e-68, Sum P(2) = 2.7e-68
Identities = 78/204 (38%), Positives = 128/204 (62%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIVCTQP 243
R LP+ F++ + + + ++QV++I GETG GKTTQ+PQ+L E ++ KG KI CTQP
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKG--MKIACTQP 453
Query: 244 RRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRL 303
RR++A SVA R++ E G +G+ +GY IR E + + + + T+G+LLR +S+
Sbjct: 454 RRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE----- 508
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADR 363
P D+++ + ++VDE HER ++D + +I+D+ P L++++ SAT+D R
Sbjct: 509 ------P---DLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTAR 559
Query: 364 FSQYFGGCPVIQVPGFTYPVKSFY 387
FS +F PV ++PG +PV FY
Sbjct: 560 FSTFFDDAPVFRIPGRRFPVDIFY 583
Score = 46 (21.3 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 485 GADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELID 544
G+ Q K K + + E+E + E ++ KK + + K + D++ T L D
Sbjct: 115 GSSLQKKRKKRKHLRKKREEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQD 174
Query: 545 L 545
L
Sbjct: 175 L 175
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 407 (148.3 bits), Expect = 3.2e-68, Sum P(2) = 3.2e-68
Identities = 137/424 (32%), Positives = 210/424 (49%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL---LANPFFRDTSKF 593
T PE L + + +I M G ILVFL G E+I ++ + N
Sbjct: 251 TQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVGN-LGDQVGPI 309
Query: 594 VIIPLHSMVPSVQQKKVFK---RP-----PPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
++PL+S +P Q+K+F P PPG RKI++STNIAET++TID +VYVID G
Sbjct: 310 KVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPG-RKIVVSTNIAETSLTIDGIVYVIDPGF 368
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPE 704
K+K Y+P V +L S +SKASA QR+GRAGR + G C+ LY++ + L PE
Sbjct: 369 AKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPE 428
Query: 705 IKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
I R + L +K L I+D + +DPP T+ A+ VL +GAL D +T+
Sbjct: 429 ILRSNLANTVLTLKKL----GIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTK 484
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNE-KKRATAAK 822
GE + + P M+KML + +C + L+++ + F I P E +K A AK
Sbjct: 485 TGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCF---IRPREAQKAADEAK 541
Query: 823 FELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTEL 882
+ G D L ++ + +K Q ++ +C + F+++ M +R+QL
Sbjct: 542 ARFGHIEG---DHLTLLNVYHAFK---QNNEDPNWCYENFINNRAMKSADNVRQQLVR-- 593
Query: 883 IKNGFIPEDVSSCS--HNARVPGI-IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKV 939
I + F ++ CS N+R I I ++AG + VA L + G ++ V
Sbjct: 594 IMSRF---NLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLE---RTGH-YLTVKDNQVV 646
Query: 940 RLHP 943
LHP
Sbjct: 647 HLHP 650
Score = 370 (135.3 bits), Expect = 3.2e-68, Sum P(2) = 3.2e-68
Identities = 78/214 (36%), Positives = 130/214 (60%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS----KGETC 236
I+E+R LP+ K+ T+++NQ +++ GETG GKTTQ+PQF+++ + + K
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
+ CTQPRR++A SV+ R++ E IG+ +GY IR E + + + T+G+LLR
Sbjct: 114 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLR--- 170
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
EA P + II+DE HER +D + +++++L + P L+L++MS
Sbjct: 171 --------EAMADPLLERYKV---IILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 219
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
ATL+A++F YF G P+++VPG +PV+ FY ++
Sbjct: 220 ATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQE 253
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 507 (183.5 bits), Expect = 3.9e-68, Sum P(4) = 3.9e-68
Identities = 117/332 (35%), Positives = 177/332 (53%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G +LVFL G +I+ + A + T ++V++PLHS + Q KVF PPG R
Sbjct: 376 ERGDLLVFLSGMAEISSVLEA--AQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVR 433
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K ILSTNIAET++TID + +V+DSG++KE YDP + LQ W+S+ASA+QR GRAGR
Sbjct: 434 KCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGR 493
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
G+C+ LY++ + + VPEI+R+ ++ L LQ+K + + F ++PP
Sbjct: 494 TGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVG-DPRTF--PFIEPPPP 550
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++ AI+ LQD GAL E +T +G L L V ++ KML + +P LT+A A
Sbjct: 551 ASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAA 610
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW---KNAKQRGQEAW 856
+ PFT N + AA+ L S Q D + F W K+ + R W
Sbjct: 611 LSVQSPFTRSAQSNPE--CAAARRPLES---DQGDPFTLFNVFNAWVQVKSERSRNSRKW 665
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
C + + + +R+Q + L +G +
Sbjct: 666 -CRHRGIEEHRLYEMANLRRQFKELLEDHGLL 696
Score = 291 (107.5 bits), Expect = 3.9e-68, Sum P(4) = 3.9e-68
Identities = 63/150 (42%), Positives = 89/150 (59%)
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
+ CTQPRRI+ S+A+R+S E G +GY+IR ES + IVF T G+LLR
Sbjct: 206 VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLR---- 261
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+ +P+ L IVDE+HER ++DF+L ++R +LP P L++ILMSA
Sbjct: 262 -------QIQREPSLPQYQVL---IVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSA 311
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
T++ FS YFG PV+QVPG +P+ Y
Sbjct: 312 TINISLFSSYFGTAPVVQVPGRLFPITVVY 341
Score = 247 (92.0 bits), Expect = 1.5e-63, Sum P(4) = 1.5e-63
Identities = 62/161 (38%), Positives = 90/161 (55%)
Query: 135 NQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDA--NLRQIVEERSKLPISS 192
N S TRG R + +P E + +K A L ++ ER+ LPI+
Sbjct: 107 NLSVLGPDTRGSR-GLGRQPPERVTEFRRALLHYLDFSQKQAFGRLAKLQHERAALPIAQ 165
Query: 193 FKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVA 252
+ + I T+ +QVV+++G+TGCGK+TQVPQ+LL +S + CTQPRRI+ S+A
Sbjct: 166 YGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-----VACTQPRRIACISLA 220
Query: 253 ERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
+R+S E G +GY+IR ES + IVF T G+LLR
Sbjct: 221 KRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLR 261
Score = 53 (23.7 bits), Expect = 3.2e-20, Sum P(3) = 3.2e-20
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 482 LSLGADCQLKAKDGRTALQLGEQENQPEV--AQI-IKKHMENALSDSMKQQ 529
L DC DG LQL + E+ + A + ++ H E+ L + +Q
Sbjct: 904 LDTNGDCSRLVADGWLELQLADSESAVRLLAASVRLRAHWESTLDQQLARQ 954
Score = 39 (18.8 bits), Expect = 3.9e-68, Sum P(4) = 3.9e-68
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 904 IIHAVLMAGLYPMVARLRP---PHKNGRRFVETAGGAKVRLHP 943
++ VL GLYP +A P K+ + T LHP
Sbjct: 792 LLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQSKQGTVLHP 834
Score = 38 (18.4 bits), Expect = 3.9e-68, Sum P(4) = 3.9e-68
Identities = 11/48 (22%), Positives = 20/48 (41%)
Query: 1060 TALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
T L++ +Y + ++ A AL P YA+ L+Y+
Sbjct: 1000 TGLEVQNLYVGPQTITAAPSLPGLFGSSALSPHPTKGGYAVTDFLTYN 1047
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 422 (153.6 bits), Expect = 4.5e-68, Sum P(2) = 4.5e-68
Identities = 112/356 (31%), Positives = 185/356 (51%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKT----RDRLLANPFFRDTSKFVIIPLHSMVP 603
++Q+L I + G ILVF+ G EDI T +R+ ++P++S +P
Sbjct: 855 VKQIL-SIHVTQGVGDILVFMTGQEDIETTCATVEERI--KQLGPQAPPLTLLPIYSQLP 911
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
S Q K+F++ G RK I++TNIAET++T+D ++YVID+G K K Y+P + +LQ +
Sbjct: 912 SDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVT 971
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDP 722
+SKA+A QR+GRAGR G CY LY++ L D +PEI+R + + L +K +
Sbjct: 972 PISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGV 1031
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
N+ DF +DPP I N++ L +GAL ++T LG+++ + P +SKM+
Sbjct: 1032 K-NLLDF--DFMDPPPQDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVI 1088
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
A + C +T+ F P E+ A+ KF + +SD L ++ +
Sbjct: 1089 VAEQLGCGQDIVTIVSMLSMPSVFYRPKGAEEESDASREKF-----FVPESDHLTLLHVY 1143
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN 898
+ WK Q W C+++++ M + +R QL ++++ V SC N
Sbjct: 1144 QQWKINNYSSQ--W-CAEHYIHIKAMRKVREVRGQLLDIMVQHDM---KVESCGSN 1193
Score = 366 (133.9 bits), Expect = 4.5e-68, Sum P(2) = 4.5e-68
Identities = 94/258 (36%), Positives = 143/258 (55%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ I E+R LPI ++ + + N V++I GETG GKTTQ+ Q+L E +SK KI
Sbjct: 650 KTIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFG--KI 707
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
CTQPRR++A SVA+R+S E +G+ +GY IR E ++I + T+G+LLR
Sbjct: 708 GCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLR----- 762
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
E+ N P D SA II+DE HER +D + I++ ++ ++LI+ SAT
Sbjct: 763 ------ESFNDPNLDKYSA---IIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSAT 813
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFY----LEDVL-SILKSAESNHLDSA--SLIVP 411
+D+ +FS +FG PV +PG T+PV + ED + S +K S H+ ++V
Sbjct: 814 MDSKKFSMFFGDVPVFTIPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVF 873
Query: 412 NEDPELTEENKSTLDEAI 429
E E +T++E I
Sbjct: 874 MTGQEDIETTCATVEERI 891
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 426 (155.0 bits), Expect = 4.6e-68, Sum P(3) = 4.6e-68
Identities = 117/351 (33%), Positives = 180/351 (51%)
Query: 535 LATVNPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PFFRDT 590
L T PE +D LI + +I + G IL+FL G E+I+ + L D
Sbjct: 768 LYTKEPETDYLDASLITVM--QIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDV 825
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F P G RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 826 PELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKV 885
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ--LRAASLPDFQVPEIKRI 708
Y+ + +L + +S+A+AKQRAGRAGR G Y LY++ R LP VPEI+R
Sbjct: 886 YNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPT-PVPEIQRT 944
Query: 709 PIEELCLQVKLLDPNCNIE-DFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ LQ+K + N + DF+ PPV + A+ L + AL + +T LG +
Sbjct: 945 NLATTVLQLKTMGINDLLHFDFMDA---PPVESLVM-ALEQLHSLSALDDEGLLTRLGRR 1000
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P +SKML ++ + C D LT+ ++ F P AKF A
Sbjct: 1001 MAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQA- 1059
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
+ D L ++A + WKN K AW C + FV + +RKQL
Sbjct: 1060 ----EGDHLTLLAVYNSWKNNKF--SNAW-CYENFVQIRTLKRSQDVRKQL 1103
Score = 368 (134.6 bits), Expect = 4.6e-68, Sum P(3) = 4.6e-68
Identities = 89/229 (38%), Positives = 135/229 (58%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+VE+R LPI +D + V NQ++++ GETG GKTTQ+ Q+L E ++ KI C
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARG--KIGC 636
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R++ E G +G +GY IR E + I + T+G+LLR
Sbjct: 637 TQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLR------- 689
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
L EA ++ + + I++DE HER ++D + +++ + P L+LI+ SATLD
Sbjct: 690 ECLMEA-------ELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLD 742
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
A +FSQYF P+ +PG T+PV+ Y K E+++LD ASLI
Sbjct: 743 AVKFSQYFFKAPIFTIPGRTFPVEVLYT-------KEPETDYLD-ASLI 783
Score = 44 (20.5 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 270 KIRLESKGGKHSSIVFCTNGVLLRLL--VSQGVS-RLKEASNKPAKDDVSALTHIIVDEI 326
++R E + + +V V ++++ Q VS +KE KD ++ L+H D+
Sbjct: 319 QLRAEGRVTDVTEVVTRNQTVKVKVMSITGQKVSLSMKEVDQDSGKD-LNPLSHAPEDDE 377
Query: 327 HERDRYSD 334
RDR D
Sbjct: 378 SLRDRNPD 385
Score = 43 (20.2 bits), Expect = 4.6e-68, Sum P(3) = 4.6e-68
Identities = 21/83 (25%), Positives = 31/83 (37%)
Query: 85 VCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTR 144
V S K V+ D GK++ P L+ + L+D P L N +
Sbjct: 351 VSLSMKEVDQDSGKDLNP-LSHAPEDDESLRDRNPDGPFSSSTSMLNLQGNGMEGDEHES 409
Query: 145 GKRVDIFCKPKMSKAEIAMKVES 167
KRV P+ + EI + S
Sbjct: 410 RKRVTRISSPE--RWEIKQMISS 430
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 415 (151.1 bits), Expect = 4.8e-68, Sum P(2) = 4.8e-68
Identities = 109/309 (35%), Positives = 159/309 (51%)
Query: 559 SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
SE ++LVFLPG +IN + LL N + + + PLHS V +Q VF P PG
Sbjct: 389 SERSSVLVFLPGLGEINYMHE-LLTNMVHK---RLQVYPLHSSVTLEEQNNVFLSPVPGY 444
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKIILSTNIAE+++T+ DV YVID + D N +L+ SW SK S +QR GRAG
Sbjct: 445 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCEQRKGRAG 504
Query: 679 RCQAGICYHL-YSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
R G CY L + S+P+ +PE+ R P+ L+VKLLD L L PP
Sbjct: 505 RVSKGYCYRLVHKDFWDNSIPNHVIPEMLRCPLGSTILKVKLLDMG-EPRALLATALSPP 563
Query: 738 VSVTIRNAIIVLQDIGALSL----------DEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
I I++L+++GAL++ D ++T LG L L V + K++ +
Sbjct: 564 SLSDIERTILLLKEVGALAVSGRREDDNPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVF 623
Query: 788 DCLDPALTL---ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
CLD L + A + ++ F +P + F +S +SD +A++ AF
Sbjct: 624 GCLDECLIIVLIAASLSLKNFFAMPFRQHLDGYRNKVNFAGSS----RSDCIALVEAFRA 679
Query: 845 WKNAKQRGQ 853
W+ +QRG+
Sbjct: 680 WQTCRQRGE 688
Score = 373 (136.4 bits), Expect = 4.8e-68, Sum P(2) = 4.8e-68
Identities = 97/281 (34%), Positives = 156/281 (55%)
Query: 172 IEKDANLRQIVEERSK---LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH 228
+ K +++ +I E K LPIS K+ + S ++SN VV+I G TG GK+TQ+PQ++L+H
Sbjct: 119 LAKSSHVMRIPETAYKYPELPISRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDH 178
Query: 229 IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTN 288
+ C IV TQPR+I A+S+A IS ERG +G +GY++ LE + + +++ T
Sbjct: 179 YLQRSAYCNIVVTQPRKIGASSIARWISRERGWVLGGLVGYQVGLEKIATEDTKLIYMTT 238
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP 348
GVLL+ +VS AK V TH+ +DE+HER DF+L ++R +L +
Sbjct: 239 GVLLQKIVS-------------AKSLVE-FTHVFIDEVHERTEEMDFLLLVVRKLLRTNS 284
Query: 349 H-LRLILMSATLDADRFSQYFGG------CP--VIQVPGFTYPVKSFYLEDVLSILKSAE 399
++++LMSAT++ F+ YF P + +V G + ++ +YL D+ + S
Sbjct: 285 RFVKVVLMSATINCREFADYFAVPVQNKMSPAYIFEVEGKPFSIEEYYLNDLEHVHHSRL 344
Query: 400 SNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDM 440
S HL E+P +T ++ + AISL D+ DM
Sbjct: 345 SPHL--------LEEPVIT---RAVYEVAISLIQMFDDLDM 374
Score = 54 (24.1 bits), Expect = 5.7e-30, Sum P(2) = 5.7e-30
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766
KL + N+ DF +KT+DP V V+ N + + I L L +VTE+ E
Sbjct: 874 KLRNTRVNV-DFQKKTVDP-VQVSF-NMVDQSRTITDLLLTVEVTEVVE 919
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 392 (143.0 bits), Expect = 5.0e-68, Sum P(2) = 5.0e-68
Identities = 128/435 (29%), Positives = 219/435 (50%)
Query: 562 GAILVFLPGWEDINKTRDRL--LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
G ILVFL G E+I +T+ +L + + T + +I P+++ +P QQ K+F+ P CR
Sbjct: 436 GDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCR 495
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K++L+TNIAET++TID + YVID G +KE SY P ++ L + S+AS QRAGRAGR
Sbjct: 496 KVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGR 555
Query: 680 CQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTL-DPP 737
G C+ ++++ L PEI R + L + L + D ++ L D P
Sbjct: 556 VGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSL----GVTDLIKFPLMDKP 611
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMD-C---LDPA 793
T+R ++ L +GAL+ +T LG+ + P +K+L+ A + C L+
Sbjct: 612 SIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEEC 671
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LT+ + P +L I +KR AA L+ + +SD + + F W+N+K
Sbjct: 672 LTIVSML-HETP-SLFIG---QKRDAAASV-LSEV---ESDHILYLEIFNQWRNSKF--S 720
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVL---- 909
+W C + + M + +R QL K G + ++ + + G I+A +
Sbjct: 721 RSW-CQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCF 779
Query: 910 MAGLYPM-VARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP--LMVYDEI 966
++G +PM + +L P + ++GG V +HP S+ F ++ K+ P ++Y ++
Sbjct: 780 ISG-FPMNIVQLGPT--GYQTMGRSSGGLNVSVHPTSILF-VNHKEKAQRPSKYVLYQQL 835
Query: 967 TRGDGGMHVRNCTVV 981
+R+C V+
Sbjct: 836 MLTSKEF-IRDCLVI 849
Score = 389 (142.0 bits), Expect = 5.0e-68, Sum P(2) = 5.0e-68
Identities = 88/241 (36%), Positives = 143/241 (59%)
Query: 149 DIFCKPKMS-KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVV 207
D+ + K+ +A +A +E+ RI I E R LP+ +KD + + NQV+
Sbjct: 189 DLLPEEKLQYEARLAQALETEEKRI------LTIQEARKLLPVHQYKDELLQEIKKNQVL 242
Query: 208 LISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNI 267
+I GETG GKTTQ+PQ+L+E ++ +I TQPRR++ATSVA R++ E +G +
Sbjct: 243 IIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEV 302
Query: 268 GYKIRLESKGGKHSSIV-FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEI 326
GY+IR E K + +++ + T+G+LLR ++ S+L + S I++DE
Sbjct: 303 GYQIRFEDKTTPNKTVLKYMTDGMLLREFLTD--SKLSKYSC------------IMIDEA 348
Query: 327 HERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSF 386
HER +D ++ +++D+LP P L+L++ SAT++A +FS++F CP+ VPG YPV
Sbjct: 349 HERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIH 408
Query: 387 Y 387
Y
Sbjct: 409 Y 409
Score = 44 (20.5 bits), Expect = 9.4e-32, Sum P(2) = 9.4e-32
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 483 SLGADCQLKAKDGRTALQLGEQENQP 508
SLG + +AKD +ALQL P
Sbjct: 33 SLGEEEDKEAKDKNSALQLKRSRYDP 58
Score = 37 (18.1 bits), Expect = 5.1e-31, Sum P(2) = 5.1e-31
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 301 SRLKEASNKPAKDDVSAL 318
S L E +K AKD SAL
Sbjct: 32 SSLGEEEDKEAKDKNSAL 49
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 507 (183.5 bits), Expect = 5.4e-68, Sum P(4) = 5.4e-68
Identities = 117/332 (35%), Positives = 177/332 (53%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G +LVFL G +I+ + A + T ++V++PLHS + Q KVF PPG R
Sbjct: 381 ERGDLLVFLSGMAEISSVLEA--AQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVR 438
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K ILSTNIAET++TID + +V+DSG++KE YDP + LQ W+S+ASA+QR GRAGR
Sbjct: 439 KCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGR 498
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
G+C+ LY++ + + VPEI+R+ ++ L LQ+K + + F ++PP
Sbjct: 499 TGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVG-DPRTF--PFIEPPPP 555
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++ AI+ LQD GAL E +T +G L L V ++ KML + +P LT+A A
Sbjct: 556 ASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAA 615
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW---KNAKQRGQEAW 856
+ PFT N + AA+ L S Q D + F W K+ + R W
Sbjct: 616 LSVQSPFTRSAQSNPE--CAAARRPLES---DQGDPFTLFNVFNAWVQVKSERSRNSRKW 670
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
C + + + +R+Q + L +G +
Sbjct: 671 -CRHRGIEEHRLYEMANLRRQFKELLEDHGLL 701
Score = 291 (107.5 bits), Expect = 5.4e-68, Sum P(4) = 5.4e-68
Identities = 63/150 (42%), Positives = 89/150 (59%)
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
+ CTQPRRI+ S+A+R+S E G +GY+IR ES + IVF T G+LLR
Sbjct: 211 VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLR---- 266
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+ +P+ L IVDE+HER ++DF+L ++R +LP P L++ILMSA
Sbjct: 267 -------QIQREPSLPQYQVL---IVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSA 316
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
T++ FS YFG PV+QVPG +P+ Y
Sbjct: 317 TINISLFSSYFGTAPVVQVPGRLFPITVVY 346
Score = 247 (92.0 bits), Expect = 2.0e-63, Sum P(4) = 2.0e-63
Identities = 62/161 (38%), Positives = 90/161 (55%)
Query: 135 NQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDA--NLRQIVEERSKLPISS 192
N S TRG R + +P E + +K A L ++ ER+ LPI+
Sbjct: 112 NLSVLGPDTRGSR-GLGRQPPERVTEFRRALLHYLDFSQKQAFGRLAKLQHERAALPIAQ 170
Query: 193 FKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVA 252
+ + I T+ +QVV+++G+TGCGK+TQVPQ+LL +S + CTQPRRI+ S+A
Sbjct: 171 YGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-----VACTQPRRIACISLA 225
Query: 253 ERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
+R+S E G +GY+IR ES + IVF T G+LLR
Sbjct: 226 KRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLR 266
Score = 53 (23.7 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 482 LSLGADCQLKAKDGRTALQLGEQENQPEV--AQI-IKKHMENALSDSMKQQ 529
L DC DG LQL + E+ + A + ++ H E+ L + +Q
Sbjct: 909 LDTNGDCSRLVADGWLELQLADSESAVRLLAASVRLRAHWESTLDQQLARQ 959
Score = 39 (18.8 bits), Expect = 5.4e-68, Sum P(4) = 5.4e-68
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 904 IIHAVLMAGLYPMVARLRP---PHKNGRRFVETAGGAKVRLHP 943
++ VL GLYP +A P K+ + T LHP
Sbjct: 797 LLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQSKQGTVLHP 839
Score = 38 (18.4 bits), Expect = 5.4e-68, Sum P(4) = 5.4e-68
Identities = 11/48 (22%), Positives = 20/48 (41%)
Query: 1060 TALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
T L++ +Y + ++ A AL P YA+ L+Y+
Sbjct: 1004 TGLEVQNLYVGPQTITAAPSLPGLFGSSALSPHPTKGGYAVTDFLTYN 1051
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 422 (153.6 bits), Expect = 9.5e-68, Sum P(2) = 9.5e-68
Identities = 115/378 (30%), Positives = 195/378 (51%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQ 606
++Q+L I + G ILVF+ G EDI T + + D K I+P++S +P+ Q
Sbjct: 384 VKQVLA-IHVSQGPGDILVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMPAEQ 442
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F+R PG RK+I++TNIAET++T+D +++V+DSG K K Y+P + TLQ + +S
Sbjct: 443 QAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPIS 502
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKRIPIEELCLQVKLLDPNCN 725
+A+A QR+GRAGR G Y LY+++ + Q +PEI+R + L +K L
Sbjct: 503 QANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSL----G 558
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
++D L +DPP TI ++ L +GAL +T LG ++ + P ++K++ A
Sbjct: 559 VKDLLDFDFMDPPPQETISTSLFELWSLGALDNLGDLTHLGRQMTPFPMDPPLAKLIITA 618
Query: 785 ILM-DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFE 843
C + LT+ + F P E+ A KF + +SD L ++ +
Sbjct: 619 AEQYGCSEEMLTIVSMLSVPNVFYRPKERQEESDAAREKF-----FVPESDHLTLLHVYT 673
Query: 844 CWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG 903
WK+ G +C+++F+ + + +R QL ++ +P + SC +
Sbjct: 674 QWKS---NGYSDHWCTKHFLHAKTLRRAKEVRDQLNDIMVMQK-LP--LISCGTDWDE-- 725
Query: 904 IIHAVLMAGLYPMVARLR 921
I + +G Y AR++
Sbjct: 726 -IRKCICSGFYHQAARVK 742
Score = 356 (130.4 bits), Expect = 9.5e-68, Sum P(2) = 9.5e-68
Identities = 92/256 (35%), Positives = 144/256 (56%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQ 242
E+R LP + ++ + + NQVV++ GETG GKTTQ+ QFL E ++K I CTQ
Sbjct: 183 EQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKFGM--IGCTQ 240
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRR++A SVA+R+S E ++GD +GY IR E G +++I + T+GVLLR + Q
Sbjct: 241 PRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLVQ---- 296
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
D+ + II+DE HER +D ++ +++ +L L+LI+ SAT++A+
Sbjct: 297 ----------TDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAE 346
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFY----LEDVL-SILKSAESNHLDSA--SLIVPNEDP 415
RFS++FGG P +PG T+PV + ED + S +K + H+ ++V
Sbjct: 347 RFSRFFGGAPEFIIPGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQ 406
Query: 416 ELTEENKSTLDEAISL 431
E E +DE + L
Sbjct: 407 EDIEATCELVDERLKL 422
Score = 40 (19.1 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 516 KHMENA--LSDSMKQQLLDKYLATVNPELIDLVL----IEQLLRKICMDSEDGAILV 566
K+M + L +S+ Q LDKY + E + L + LL+KI D ++V
Sbjct: 282 KYMTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIV 338
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 414 (150.8 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 112/377 (29%), Positives = 191/377 (50%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQ 606
++Q L+ + + G IL+F+PG EDI T D+++ + + ++P++S +PS
Sbjct: 728 VKQSLQ-VHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDL 786
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F++ P G RK I++TNIAET++T+D +++VIDSG K K ++P + LQ +S
Sbjct: 787 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 846
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
+A+A QR+GRAGR G C+ LY+Q + L VPEI+R + + L +K L
Sbjct: 847 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL----G 902
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
++D LQ +DPP + N++ L +GAL +T G + + P +SKML +
Sbjct: 903 VQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 962
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
M C L + F P E+ KF + +SD L+ + +
Sbjct: 963 CDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVP-----ESDHLSYLNVYLQ 1017
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
WKN W C+ +F+ + M + +R QL+ +++ ++SC + I
Sbjct: 1018 WKNNNY--STIW-CNDHFIHAKAMRKVREVRAQLKDIMVQQRM---SLASCGTDW---DI 1068
Query: 905 IHAVLMAGLYPMVARLR 921
+ + A + A+L+
Sbjct: 1069 VRKCICAAYFHQAAKLK 1085
Score = 379 (138.5 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 98/271 (36%), Positives = 155/271 (57%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + I+E+R LPI + + + + + N +V++ GETG GKTTQ+ Q+L E ++ +
Sbjct: 520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT--DY 577
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I CTQPRR++A SVA+R+S E G N+G+ +GY IR E + + I + T+G+LLR
Sbjct: 578 GMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLR-- 635
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+EA D SA II+DE HER +D + ++R+++ L+LI+
Sbjct: 636 -----ESLREAD----LDHYSA---IIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 683
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL----ED-VLSILKSAESNHLDSAS--- 407
SAT+DA++F+ +FG P+ +PG T+PV + ED V + +K + HL A
Sbjct: 684 SATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDI 743
Query: 408 -LIVPN-EDPELTE----ENKSTLDEAISLA 432
+ +P ED E+T E+ L+ A +LA
Sbjct: 744 LIFMPGQEDIEVTSDQIVEHLEELENAPALA 774
Score = 39 (18.8 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKD 195
++ L S K+ + E++ K ISS+KD
Sbjct: 51 LDLLASLKRKEREEKDDGEDKKKSRISSYKD 81
Score = 38 (18.4 bits), Expect = 6.6e-33, Sum P(2) = 6.6e-33
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 540 PELIDLVLIEQLLRKICMDSEDG 562
P L+ L L+ L RK + +DG
Sbjct: 46 PSLLGLDLLASLKRKEREEKDDG 68
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 400 (145.9 bits), Expect = 2.3e-67, Sum P(3) = 2.3e-67
Identities = 110/366 (30%), Positives = 190/366 (51%)
Query: 527 KQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF 586
K ++ Y + +D ++ L +I + G ILVFL G E++++ + L
Sbjct: 643 KYEVTTHYTQAPEADYLDAAVVTVL--QIHITEPLGDILVFLTGQEEVDQAAEMLQTRTR 700
Query: 587 FRDTS--KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSG 644
T + +I ++S +P+ Q K+F+ PP RK++L+TNIAET++TID ++YVID G
Sbjct: 701 GLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPG 760
Query: 645 RMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVP 703
K+K ++P + +L + VS+ASA QR GRAGR G C+ L++ + L + +P
Sbjct: 761 FCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIP 820
Query: 704 EIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
EI+R + + L +K + N ++ +F +DPP + T+ A+ L +GAL+ ++T+
Sbjct: 821 EIQRTNLGNVVLLLKSMGIN-DLMNF--DFMDPPPAQTLIAALEQLYALGALNDRGQLTK 877
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG K+ V P +SKM+ + C + LT+ + T+ P +K A A
Sbjct: 878 LGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGN--TIFYRPKDKAFAADAAR 935
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
+L + Q D L ++ F W+ + G +C + F+ M +R QL+ L+
Sbjct: 936 KL--FFHPQGDHLTLMNVFNQWRES---GYAVQWCFENFIQHRSMKRAQDVRDQLEL-LL 989
Query: 884 KNGFIP 889
+ IP
Sbjct: 990 ERVEIP 995
Score = 378 (138.1 bits), Expect = 2.3e-67, Sum P(3) = 2.3e-67
Identities = 86/230 (37%), Positives = 137/230 (59%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I E R LP+ +++ + V QV++I GETG GKTTQ+PQ+L E +SK T KI C
Sbjct: 460 IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSK--TGKIGC 517
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA R++ E G +G+ +GY IR E + + + + T+G+L+R
Sbjct: 518 TQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVR------- 570
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D+++ + +I+DE HER ++D + +++D+ P L+L++ SAT+D
Sbjct: 571 ----EFLTAP---DLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMD 623
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
A+RFS YF G P +PG Y V + Y + + E+++LD+A + V
Sbjct: 624 AERFSDYFDGAPTFNIPGRKYEVTTHYTQ-------APEADYLDAAVVTV 666
Score = 51 (23.0 bits), Expect = 2.3e-67, Sum P(3) = 2.3e-67
Identities = 23/115 (20%), Positives = 51/115 (44%)
Query: 36 LDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVET 94
++ F+++ E + ++N + + ++++ +K+ + SS +S S K
Sbjct: 41 VNSFISTLTEQDFPINSNTKSFAQELLNKSQQKIQNITSSSSSSSSTSLSSSSSSK---- 96
Query: 95 DKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVD 149
DK KE + L ++ KLV+ D G D+ + RK + + ++ D
Sbjct: 97 DKEKEKIEFLKKNKSYKLVI-DHDDDIVNSSGSSDSDSDSERKRKKKEKKKEKKD 150
Score = 41 (19.5 bits), Expect = 2.5e-66, Sum P(3) = 2.5e-66
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 55 NRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVL 114
NR ++ + E G+++ + G G + V + + +E K +E+L +G ++L
Sbjct: 394 NRMKSAISE---NRGLSTANIGGGNEEYEYVFEDQ--IEFIK-EEVLKQGQKGDGV-MIL 446
Query: 115 QDLFTHYPPDDGEPGEKLDANQSRKS 140
+ P DDG K+ + RKS
Sbjct: 447 K------PGDDGSAQAKMTIQEVRKS 466
Score = 39 (18.8 bits), Expect = 5.4e-32, Sum P(3) = 5.4e-32
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 383 VKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLL 442
+KS Y+ D K+ + N S+S + +PE E ++ + AIS N L
Sbjct: 362 LKSSYINDN----KNKKGNDSSSSS----SYNPEQKEWEQNRMKSAIS---ENRG----L 406
Query: 443 ELVSLEGSPNVYNYQ-HTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAK 493
++ G Y Y VL +G+ GD M+L G D +AK
Sbjct: 407 STANIGGGNEEYEYVFEDQIEFIKEEVLK-QGQKGDGVMILKPGDDGSAQAK 457
Score = 37 (18.1 bits), Expect = 6.7e-66, Sum P(3) = 6.7e-66
Identities = 15/79 (18%), Positives = 34/79 (43%)
Query: 63 EVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYP 122
++ G + S ++R+ K +K+ + DK + + S+ + D
Sbjct: 121 DIVNSSGSSDSDSDSERKRKKKEKKKEKKDKKDKKDKKSSTRKKSDNN---WDD---EIE 174
Query: 123 PDDGEPGEKLDANQSRKSD 141
P+ +P EK D N + +++
Sbjct: 175 PEPIKPNEKEDENNNNENN 193
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 392 (143.0 bits), Expect = 2.7e-67, Sum P(2) = 2.7e-67
Identities = 97/300 (32%), Positives = 161/300 (53%)
Query: 88 SKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKR 147
SK+R ++ + S+ E + + ++L +P EP DA + + G +
Sbjct: 3 SKRRFSSEHPDPVETSIP--EQAAEIAEELSKQHPLPSEEPLVHHDAGEFK------GLQ 54
Query: 148 VDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVV 207
+ K E K+ T R E I++ R +LP+ + +D +NQ++
Sbjct: 55 RHHTSAEEAQKLEDG-KINPFTGR-EFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIM 112
Query: 208 LISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNI 267
+ GETG GKTTQ+PQF+L E ++ CTQPRR++A SVA+R++ E +G+ +
Sbjct: 113 VFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEV 172
Query: 268 GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
GY IR E+K + + + T+G+LLR EA D+S + II+DE H
Sbjct: 173 GYSIRFENKTSNKTILKYMTDGMLLR-----------EAMED---HDLSRYSCIILDEAH 218
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ER +D ++ +++ ++ P L++I+MSATLDA++F +YF P++ VPG TYPV+ +Y
Sbjct: 219 ERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYY 278
Score = 379 (138.5 bits), Expect = 2.7e-67, Sum P(2) = 2.7e-67
Identities = 120/399 (30%), Positives = 192/399 (48%)
Query: 560 EDGAILVFLPGWEDINKT--RDRLLANPFFRDTS--KFVIIPLHSMVPSVQQKKVFKRPP 615
E G IL+FL G ++I + L + R+ + PL+ +P QQ+++F+ P
Sbjct: 302 EAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP 361
Query: 616 ------PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKAS 669
PG RK+++STNIAET++TID +VYV+D G K+K Y+P V +L S +SKAS
Sbjct: 362 ESHNGRPG-RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 420
Query: 670 AKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED 728
A+QRAGRAGR + G C+ LY++ L + PEI R + L++K L I+D
Sbjct: 421 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKL----GIDD 476
Query: 729 FLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
+ +DPP T+ A+ L + L + +T LG + P+++ ML +
Sbjct: 477 LVHFDFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEF 536
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
C LT+ + F P +KKRA AK A G L V AF+
Sbjct: 537 QCSQEILTIVAMLSVPNVFIRPTK--DKKRADDAKNIFAHPDGDHITLLNVYHAFKS-DE 593
Query: 848 AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHA 907
A + G W C ++++ ++ +R QL E + N + E ++ + + I
Sbjct: 594 AYEYGIHKW-CRDHYLNYRSLSAADNIRSQL--ERLMNRYNLELNTTDYESPKYFDNIRK 650
Query: 908 VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
L +G + VA+ R K ++ V +HP ++
Sbjct: 651 ALASGFFMQVAKKRSGAKG---YITVKDNQDVLIHPSTV 686
Score = 37 (18.1 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 400 SNHLDSASLIVPNEDPELTEE 420
S H D +P + E+ EE
Sbjct: 9 SEHPDPVETSIPEQAAEIAEE 29
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 413 (150.4 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 112/377 (29%), Positives = 190/377 (50%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQ 606
++Q L+ + + G IL+F+PG EDI T D+++ + + ++P++S +PS
Sbjct: 727 VKQSLQ-VHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDL 785
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F++ P G RK I++TNIAET++T+D +++VIDSG K K ++P + LQ +S
Sbjct: 786 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 845
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
+A+A QR+GRAGR G C+ LY+Q + L VPEI+R + + L +K L
Sbjct: 846 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL----G 901
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
++D LQ +DPP + N++ L +GAL +T G + + P +SKML +
Sbjct: 902 VQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 961
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
M C L + F P E+ KF + +SD L + +
Sbjct: 962 CDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVP-----ESDHLTYLNVYLQ 1016
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
WKN W C+ +F+ + M + +R QL+ +++ ++SC + I
Sbjct: 1017 WKNNNY--STIW-CNDHFIHAKAMRKVREVRAQLKDIMVQQRM---SLASCGTDW---DI 1067
Query: 905 IHAVLMAGLYPMVARLR 921
+ + A + A+L+
Sbjct: 1068 VRKCICAAYFHQAAKLK 1084
Score = 379 (138.5 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 97/271 (35%), Positives = 156/271 (57%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + I+E+R LPI + + + + + N +V++ GETG GKTTQ+ Q+L E ++ +
Sbjct: 519 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT--DY 576
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I CTQPRR++A SVA+R+S E G N+G+ +GY IR E +++ I + T+G+LLR
Sbjct: 577 GMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLR-- 634
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+EA D SA +I+DE HER +D + ++R+++ L+LI+
Sbjct: 635 -----ESLREAD----LDHYSA---VIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 682
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL----ED-VLSILKSAESNHLDSAS--- 407
SAT+DA++F+ +FG P+ +PG T+PV + ED V + +K + HL A
Sbjct: 683 SATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDI 742
Query: 408 -LIVPN-EDPELTE----ENKSTLDEAISLA 432
+ +P ED E+T E+ L+ A +LA
Sbjct: 743 LIFMPGQEDIEVTSDQIVEHLEELENAPALA 773
Score = 38 (18.4 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 129 GEKLDANQSRKSDKTRGKRVD--IFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERS 186
G LD+ KT+ + +F P + + + + + R E++ + E++
Sbjct: 15 GTDLDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRREREE--KDEGEDKK 72
Query: 187 KLPISSFKD 195
K ISS+KD
Sbjct: 73 KSRISSYKD 81
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 413 (150.4 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 112/377 (29%), Positives = 190/377 (50%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQ 606
++Q L+ + + G IL+F+PG EDI T D+++ + + ++P++S +PS
Sbjct: 728 VKQSLQ-VHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDL 786
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F++ P G RK I++TNIAET++T+D +++VIDSG K K ++P + LQ +S
Sbjct: 787 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 846
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
+A+A QR+GRAGR G C+ LY+Q + L VPEI+R + + L +K L
Sbjct: 847 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL----G 902
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
++D LQ +DPP + N++ L +GAL +T G + + P +SKML +
Sbjct: 903 VQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 962
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
M C L + F P E+ KF + +SD L + +
Sbjct: 963 CDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVP-----ESDHLTYLNVYLQ 1017
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
WKN W C+ +F+ + M + +R QL+ +++ ++SC + I
Sbjct: 1018 WKNNNY--STIW-CNDHFIHAKAMRKVREVRAQLKDIMVQQRM---SLASCGTDW---DI 1068
Query: 905 IHAVLMAGLYPMVARLR 921
+ + A + A+L+
Sbjct: 1069 VRKCICAAYFHQAAKLK 1085
Score = 380 (138.8 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 98/271 (36%), Positives = 156/271 (57%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + I+E+R LPI + + + + + N +V++ GETG GKTTQ+ Q+L E ++ +
Sbjct: 520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT--DY 577
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I CTQPRR++A SVA+R+S E G N+G+ +GY IR E +++ I + T+G+LLR
Sbjct: 578 GMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLR-- 635
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+EA D SA II+DE HER +D + ++R+++ L+LI+
Sbjct: 636 -----ESLREAD----LDHYSA---IIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 683
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL----ED-VLSILKSAESNHLDSAS--- 407
SAT+DA++F+ +FG P+ +PG T+PV + ED V + +K + HL A
Sbjct: 684 SATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDI 743
Query: 408 -LIVPN-EDPELTE----ENKSTLDEAISLA 432
+ +P ED E+T E+ L+ A +LA
Sbjct: 744 LIFMPGQEDIEVTSDQIVEHLEELENAPALA 774
Score = 37 (18.1 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 142 KTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKD 195
K+ +F P + + + + + R E++ + E++ K +SS+KD
Sbjct: 30 KSAASEQHVFKAPAPRPSLLGLDLLASLKRREREE--KDDGEDKKKSKVSSYKD 81
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 405 (147.6 bits), Expect = 5.1e-67, Sum P(3) = 5.1e-67
Identities = 112/324 (34%), Positives = 175/324 (54%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKF---VIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVFL G E+I + +L + R SK +++P+++ +PS Q ++F+ PPG
Sbjct: 612 GDILVFLTGQEEIEAACE-MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 670
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK++++TNIAET++TI+ ++YV+D G K+KSY+P + +L + SKASA QRAGRAG
Sbjct: 671 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 730
Query: 679 RCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDP 736
R AG C+ LY+ L + VPEI+R + + L +K L I D + LDP
Sbjct: 731 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSL----GIHDLMHFDFLDP 786
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P T+ A+ L +GAL+ ++T G K+ L V P++SKM+ + C + LT+
Sbjct: 787 PPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTV 846
Query: 797 ACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A + ++ P +K A A+ L GG D L ++ + W + Q
Sbjct: 847 AAMLSVNN--SIFYRPKDKVVHADNARVNFF-LPGG--DHLVLLNVYTQWAESGYSSQ-- 899
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQ 879
W C + FV M +R+QL+
Sbjct: 900 W-CYENFVQFRSMRRARDVREQLE 922
Score = 382 (139.5 bits), Expect = 5.1e-67, Sum P(3) = 5.1e-67
Identities = 78/203 (38%), Positives = 128/203 (63%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ F++ + + + ++QV++I GETG GKTTQ+PQ+L E ++K + KI CTQPR
Sbjct: 399 RRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTK-KGMKIACTQPR 457
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A SVA R++ E G +G+ +GY IR E + + + + T+G+LLR +S+
Sbjct: 458 RVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE------ 511
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
P D+++ + ++VDE HER ++D + +I+D+ P L++++ SATLD RF
Sbjct: 512 -----P---DLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARF 563
Query: 365 SQYFGGCPVIQVPGFTYPVKSFY 387
S +F PV ++PG +PV FY
Sbjct: 564 SAFFDDAPVFRIPGRRFPVDIFY 586
Score = 37 (18.1 bits), Expect = 5.1e-67, Sum P(3) = 5.1e-67
Identities = 15/62 (24%), Positives = 25/62 (40%)
Query: 124 DDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVE 183
+D E GE+ A K R +R + K + + E + E+ S K + E
Sbjct: 101 EDSESGEEAVARDGSSLQKKRKRRKHLRKKQQEEEEE---EEEASESGKRKTGGSKSPTE 157
Query: 184 ER 185
E+
Sbjct: 158 EK 159
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 417 (151.9 bits), Expect = 6.0e-67, Sum P(2) = 6.0e-67
Identities = 109/349 (31%), Positives = 183/349 (52%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF--FRDTSKFVIIPLHSMVPSV 605
+ Q+L+ I + G ILVF+ G EDI T + ++A+ D + I+P++S +P+
Sbjct: 688 VRQVLQ-IHLSQPAGDILVFMTGQEDIEATCE-IIADRLNQLHDAPRLSILPIYSQMPAD 745
Query: 606 QQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 665
Q K+F PG RK++++TNIAET++T+ + YV+D+G K K Y+ + TLQ + +
Sbjct: 746 LQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPI 805
Query: 666 SKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
S+A+A QRAGRAGR GI Y LY+++ + + +PEI+R + L +K L
Sbjct: 806 SQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVE- 864
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I DF +D P + T+ ++ L +GAL K+T LG+K+ + P +SK++ A
Sbjct: 865 EISDF--DFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIA 922
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
C + +T+ F P E+ A KF + +SD L ++ ++
Sbjct: 923 EDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREKFNVP-----ESDHLMLLNIYQH 977
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS 893
W+ + G +CS++F+ S + +R+QL + K E VS
Sbjct: 978 WQ---RNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISLESVS 1023
Score = 358 (131.1 bits), Expect = 6.0e-67, Sum P(2) = 6.0e-67
Identities = 83/231 (35%), Positives = 130/231 (56%)
Query: 153 KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGE 212
K + ++A + E + + A + E+R LP + ++ + S + NQV+++ GE
Sbjct: 457 KAGTTPVKVAGRSEQSNKKDTEFARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGE 516
Query: 213 TGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
TG GKTTQ+ QFL E + + I CTQPRR++A SVA+R+S E G +G +GY IR
Sbjct: 517 TGSGKTTQLAQFLYEDGYHRNGM--IGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIR 574
Query: 273 LESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
E G + I + T+GVLLR + Q N K V II+DE HER
Sbjct: 575 FEDVTGPDTVIKYMTDGVLLRESLMQ---------NNLEKYSV-----IIMDEAHERSLN 620
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPV 383
+D ++ +++ +L ++L++ SAT+++ +FS +FGG P +PG TYPV
Sbjct: 621 TDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPV 671
Score = 39 (18.8 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 25/96 (26%), Positives = 39/96 (40%)
Query: 326 IHERDRYSDFMLAIIRDMLPSYPHLR--LILMSATLDADRFSQYFGGCPVIQVPGFT--Y 381
+H R+SD +I D+ S L L + L + SQ G + G
Sbjct: 52 LHTFGRFSDNDSVLIYDLCKSIIGLETNLGISKDKLPGNDGSQV-AGLVLSNRSGLKGRE 110
Query: 382 PVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPEL 417
P KS DVL++ K E + ++ S + E+ L
Sbjct: 111 PKKSQLGLDVLAVQKKKEKSQVEGRSELSQVENDSL 146
Score = 37 (18.1 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 404 DSASLIVPNEDPELTEENKSTLDEAISLA--W-SNDEFDMLL 442
D+ + P EDPE + + +E L W N E LL
Sbjct: 258 DARDVEYPEEDPESKADRQRWEEEQAHLDRDWYMNSESQNLL 299
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 398 (145.2 bits), Expect = 6.5e-67, Sum P(2) = 6.5e-67
Identities = 112/389 (28%), Positives = 198/389 (50%)
Query: 562 GAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
G IL+FL G ++I ++ A + VI P+++ +PS Q K+F+ P R
Sbjct: 583 GDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENAR 642
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K++L+TNIAET++TID +VYVID G +KE Y+P +S L S+ASA QR+GRAGR
Sbjct: 643 KVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGR 702
Query: 680 CQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
G C+ LY++ + + + PEI+R + + LQ+K L N + DF + +DPP
Sbjct: 703 VGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGIN-ELLDF--EFMDPPP 759
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
+ + A+ L + L+ ++T+LG ++ P+++K + A C++ L++
Sbjct: 760 TEALIGALNQLFALQGLNHKGELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVA 819
Query: 799 ASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF 857
+ L P +K+ A AA+ GG D + ++ + W ++ W
Sbjct: 820 MLS--EASALFFRPKDKQVHADAARGRFTVKEGG--DHVTLLNIWNQWLDSDY--SPIW- 872
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
+ F+ + +R+QL ++L + + +S+C + +P I A+ AG +P
Sbjct: 873 SKENFLQQRSLTRARDVREQL-SKLCER--VEVTLSTCGGISNMPPIKRAIT-AGFFPNA 928
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
AR++ ++G + V +HP S+
Sbjct: 929 ARMQ---RSGDSYRTVKNNTTVYIHPSSV 954
Score = 375 (137.1 bits), Expect = 6.5e-67, Sum P(2) = 6.5e-67
Identities = 80/222 (36%), Positives = 136/222 (61%)
Query: 168 LTSRIEKDANLRQIV--EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
L ++I+ A RQ+ E R LPI ++D + ++ Q+++I GETG GKTTQ+PQ+L
Sbjct: 352 LQAQIDA-AEKRQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYL 410
Query: 226 LEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVF 285
E ++K + ++ CTQPRR++A SVA R++ E G +G+ +GY IR E + + +
Sbjct: 411 HEAGYTK-DGMRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKY 469
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
T+G+LLR E +P D+S+ + +++DE HER ++D +LA+++D+
Sbjct: 470 MTDGMLLR-----------EFMTEP---DLSSYSALMIDEAHERTVHTDILLALVKDLAR 515
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
L+L++ SAT++A++F+ YF P+ +PG YPV +Y
Sbjct: 516 ERKDLKLLISSATMNAEKFASYFDDAPIFNIPGRRYPVDIYY 557
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 497 (180.0 bits), Expect = 3.2e-66, Sum P(3) = 3.2e-66
Identities = 118/331 (35%), Positives = 174/331 (52%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G +LVFL G +I D A + T ++V++PLHS + Q KVF P G R
Sbjct: 379 ERGDLLVFLSGMAEITTVLDA--AQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVR 436
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K ILSTNIAET++TID + +V+DSG++KE SYDP + LQ W+S+ASA+QR GRAGR
Sbjct: 437 KCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGR 496
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
G+CY LY++ + + VPEI+R+ ++ L LQ+K + + F ++PP
Sbjct: 497 TGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVG-DPRTF--PFIEPPPP 553
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++ AI+ LQ+ GAL E +T +G L L V ++ KML + +P LT+A A
Sbjct: 554 ASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAA 613
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR--GQEAWF 857
+ PFT N ATA + L Q D + F W K G +
Sbjct: 614 LSVQSPFTRSAQSN-LDCATARR----PLESDQGDPFTLFNVFNAWVQVKSERSGNSRKW 668
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
C + V + + +R+Q + L +G +
Sbjct: 669 CRRRGVEEHRLYEMANLRRQFKELLEDHGLL 699
Score = 279 (103.3 bits), Expect = 3.2e-66, Sum P(3) = 3.2e-66
Identities = 60/150 (40%), Positives = 87/150 (58%)
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
+ CTQPRRI+ S+A+R+ E G +GY+IR ES + IVF T G+LLR
Sbjct: 209 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR---- 264
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+ +P+ L IVDE+HER ++DF+L +++ +LP P L++ILMSA
Sbjct: 265 -------QIQREPSLPQYQVL---IVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSA 314
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
T++ FS YF PV+QVPG +P+ Y
Sbjct: 315 TINISLFSSYFSHAPVVQVPGRLFPITVVY 344
Score = 243 (90.6 bits), Expect = 1.9e-62, Sum P(3) = 1.9e-62
Identities = 51/116 (43%), Positives = 75/116 (64%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
L ++ ER+ LPI+ + + I T+ +QVV+++G+TGCGK+TQVPQ+LL +S
Sbjct: 154 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----- 208
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
+ CTQPRRI+ S+A+R+ E G +GY+IR ES + IVF T G+LLR
Sbjct: 209 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR 264
Score = 50 (22.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 482 LSLGADCQLKAKDGRTALQLGEQENQPEVAQI---IKKHMENALSDSMKQQ 529
+ DC DG LQL + E+ + ++ H E+AL + +Q
Sbjct: 911 IDTNGDCSRLVADGWLELQLADSESAVRLLATSLRLRAHWESALDRQLARQ 961
Score = 37 (18.1 bits), Expect = 3.2e-66, Sum P(3) = 3.2e-66
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 904 IIHAVLMAGLYPMVA---RLRPPHKNGRRFVETAGGAKVRLHP 943
++ VL GLYP +A K+ + T LHP
Sbjct: 799 LLKLVLGRGLYPQLAVPDAFNSGRKDSDQIFHTQAKQGTVLHP 841
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 389 (142.0 bits), Expect = 3.6e-66, Sum P(2) = 3.6e-66
Identities = 117/362 (32%), Positives = 182/362 (50%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
G ILVFL G E+I T ++ R +PL+S +P QQ K+F RK
Sbjct: 287 GDILVFLTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSKIFDTCKE--RKC 344
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
I+STNIAET++TID +V+V+D G K+K+Y+P + V +L + +SKASA QRAGRAGR +
Sbjct: 345 IVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTR 404
Query: 682 AGICYHLYSQLRAASLPDFQV-PEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVS 739
G C+ LY++ L Q PEI R + + LQ+ L + D + +DPPV
Sbjct: 405 PGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKL----GVVDLVHFDFMDPPVP 460
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
T+ A+ VL +GAL + ++TE+G + + P +SKML + C + LT+A
Sbjct: 461 DTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAM 520
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCS 859
+ F P + + A +AK G D L ++ + +K + G++ +C
Sbjct: 521 LSAPNCFMRP--KDNRIEADSAKKSFDHFDG---DHLTMLNVYHSFK---KNGEDPTWCY 572
Query: 860 QYFVSSGVMNMLLGMRKQLQTEL--IKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
F++ + +R QL L K + DV+S + + I AG + V
Sbjct: 573 DNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCI----AAGFFMQV 628
Query: 918 AR 919
A+
Sbjct: 629 AK 630
Score = 370 (135.3 bits), Expect = 3.6e-66, Sum P(2) = 3.6e-66
Identities = 85/227 (37%), Positives = 134/227 (59%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-IWSKGETCKI 238
+I+E+R +LP+ K+ + NQVV++ GETG GKTTQ+PQF+++ + G+ +
Sbjct: 69 EILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGV 128
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
TQPRR++A SVA+R+S E +G+ +GY IR E + + + T+G+LLR
Sbjct: 129 --TQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLR----- 181
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
E+ + P + II+DE HER +D + +I+D+L L+LI+MSAT
Sbjct: 182 ------ESMSDPTLNKYDV---IILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSAT 232
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS-ILKSAESNHLD 404
L+A +F +YF P+I+VPG +PV+ FY E+ L+SA +D
Sbjct: 233 LEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVID 279
Score = 41 (19.5 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 942 HPHSLNFKLSFKKTDDCPLMVYD 964
H LN SFKK + P YD
Sbjct: 551 HLTMLNVYHSFKKNGEDPTWCYD 573
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 406 (148.0 bits), Expect = 3.8e-66, Sum P(3) = 3.8e-66
Identities = 124/400 (31%), Positives = 201/400 (50%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLLA--NPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
+C + E G IL+FL G E+I + R+ + + + IPL+S +P Q+++F+
Sbjct: 277 MCEEIE-GDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFE 335
Query: 613 -RPPPGC-----RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
PPP RK+++STNIAET++TID VV+VID G K+K Y+P V +L S +S
Sbjct: 336 PAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS 395
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
KASA+QR+GRAGR + G C+ LY++ + + D PEI R + + LQ+K L
Sbjct: 396 KASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKL----G 451
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I+D + +DPP T+ A+ +L + AL D +T+LG + + P ++KML +
Sbjct: 452 IDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIAS 511
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNE-KKRATAAKFELASLYGGQSDQLAVIAAFE 843
+C + L++ F + PNE KK A AK A + G D L ++ +
Sbjct: 512 CQHNCSNEILSITAMLSVPQCF---VRPNEAKKAADEAKMRFAHIDG---DHLTLLNVYH 565
Query: 844 CWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG 903
+K + + W C + F++ + +R+QL + + S + V
Sbjct: 566 AFKQSSE--DPNW-CYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVN- 621
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHP 943
I L+ G + VA L + G ++ V+LHP
Sbjct: 622 -IRKALVQGFFMQVAHLE---RTGY-YLTIKDNQNVQLHP 656
Score = 360 (131.8 bits), Expect = 3.8e-66, Sum P(3) = 3.8e-66
Identities = 75/209 (35%), Positives = 125/209 (59%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ + ++R LP+ ++ + +Q +++ GETG GKTTQ+PQ+ ++ SKG +
Sbjct: 63 QNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRK-GV 121
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
CTQPRR++A SVA+R+S E +G+ +GY IR E + + + T+G+LLR
Sbjct: 122 SCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLR----- 176
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
EA + P D I++DE HER +D ++ ++++++ L+L++MSAT
Sbjct: 177 ------EAMSDPMLDQYQV---ILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSAT 227
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
LDA +F QYF P+++VPG T+PV+ FY
Sbjct: 228 LDAGKFQQYFDNAPLMKVPGRTHPVEIFY 256
Score = 37 (18.1 bits), Expect = 3.8e-66, Sum P(3) = 3.8e-66
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 21 SPTVAEATRIRISQILDGFLASK 43
S + A A ++QIL GF+ +K
Sbjct: 23 SSSSAAAAAGTVAQILGGFVPNK 45
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 384 (140.2 bits), Expect = 5.8e-66, Sum P(2) = 5.8e-66
Identities = 107/358 (29%), Positives = 180/358 (50%)
Query: 534 YLATVNPELIDLVL--IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL--LANPFFRD 589
Y T P+ +D L I QL K+ G ILVFL G ++I + + +
Sbjct: 279 YTYTPEPDYLDACLRTIFQLHTKL----PPGDILVFLTGQDEIEALEALIKSYSKQLPSN 334
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
+ PL + +P QQ +VF RK++LSTNIAET++TI + YVID+G K K
Sbjct: 335 LPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIK 394
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
++ + +L +S+++A QR+GRAGR AG CY +Y++ LP +PEIKRI
Sbjct: 395 QFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDKLPKETIPEIKRID 454
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+ + L +K N ++ +F +DPP + A+ L IGAL + + +LG ++
Sbjct: 455 LSQAVLTLKARGQN-DVINF--HYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMS 511
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
+ + P +++ + A +CL + + F P ++KR A + L L+
Sbjct: 512 LIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFP----QEKRDEAIEARLKFLH 567
Query: 830 GGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ D L + A + + ++ W CSQ F++ + +L +RKQL+ +K+G+
Sbjct: 568 S-EGDLLTCLNALRQYLESSHDSRKQW-CSQNFINRRALKTILDIRKQLREHCLKDGW 623
Score = 373 (136.4 bits), Expect = 5.8e-66, Sum P(2) = 5.8e-66
Identities = 81/218 (37%), Positives = 132/218 (60%)
Query: 171 RIEKDANLRQ-IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
R E + R+ I+E+R LPI D + + N+V+++ GETG GK+TQ+PQFL E
Sbjct: 78 RSENSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECP 137
Query: 230 WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNG 289
+++ E C + TQPRR++A ++A+R++ E+G +G+ +GY IR + K + I + T+G
Sbjct: 138 YAQ-EGC-VAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDG 195
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
+LLR L+ N P +S +I+DE HER +D +L ++ ++ P
Sbjct: 196 MLLRELI-----------NDPI---LSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPA 241
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
LR+I+MSATL+A+RFS++F G + + G YPV+ Y
Sbjct: 242 LRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHY 279
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 438 (159.2 bits), Expect = 7.8e-66, Sum P(2) = 7.8e-66
Identities = 132/436 (30%), Positives = 221/436 (50%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLL---ANPFFRDTSKFVIIPLHSMVPSVQQKKVF 611
I + +G IL+FL G E+I +T +L+ A + + +PL++ + + QQ VF
Sbjct: 240 IHLQEGEGDILIFLTGREEI-ETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVF 298
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
+ P RK+++STNIAE ++TI+ +VYV+D G K ++YDP + TL + +SKA+A
Sbjct: 299 EPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAV 358
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE-DFL 730
QRAGRAGR + G C+ LY+Q LPD +PEI+R + + +Q+K L + + DFL
Sbjct: 359 QRAGRAGRTKPGKCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFL 418
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKLGCLSVHPLMSKMLFFAILMDC 789
PP + IR A +L +GA+ K+T+ LG ++ L+V P+M+K+L A C
Sbjct: 419 TS---PPADLVIR-AFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGC 474
Query: 790 LDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAK 849
L LT+A + + +KK + +++ + A G L V AF K
Sbjct: 475 LSEILTIAAMVSLQGAVWVQ-HDGDKKSSESSRRKFAVEEGDHLTYLNVYQAFV----TK 529
Query: 850 QRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN----ARVPGII 905
+ + W C ++ + + +R QL+ L + G ++ +N ++ I
Sbjct: 530 GKKESKW-CRDNLLNYRSLLRAVSVRAQLKRYLERFGIQVDETFPSHYNKSDLSKPAEKI 588
Query: 906 HAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDE 965
L G + AR++P +G F +GG + HP SL F +K D +++ E
Sbjct: 589 QRCLTTGYFAHAARMQP---DGT-FKTVSGGMTLHAHPSSLMFN---RKAD---WVIFHE 638
Query: 966 ITRGDGGMHVRNCTVV 981
I + +R+ T +
Sbjct: 639 IMQTGEKTFIRDITKI 654
Score = 309 (113.8 bits), Expect = 7.8e-66, Sum P(2) = 7.8e-66
Identities = 102/296 (34%), Positives = 156/296 (52%)
Query: 186 SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW-SKGETCKIVCTQPR 244
S LPI+ K I V++ V ++ G+TG GKTTQ+PQ+L + W ++G+ I TQPR
Sbjct: 20 SLLPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKA--IAVTQPR 77
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++AT+VA R++ E +G+++GY IR E + + I F T+G+LLR
Sbjct: 78 RVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLR----------- 126
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
EA P +S + I+VDE HER +D +L I++ +L P LR+I+ SATL A+ F
Sbjct: 127 EALVDPL---LSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDF 183
Query: 365 SQYFGGC-----PVIQVPGFTYPVKSF----YLEDVLSILKSAESNHLDSASLIVPNEDP 415
+YF G P +V G T + S Y D L L+SA N+++ + V D
Sbjct: 184 LRYFAGDESQQGPNGEVGGNTGKIISIEGRMYPVDTL-FLESAAENYVERSVKTV--FDI 240
Query: 416 ELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAG 471
L E L I L +E + ++L+S E + ++ +L PL + AG
Sbjct: 241 HLQEGEGDIL---IFLT-GREEIETAIQLIS-ERATTLHPKSQSLL---PLPLYAG 288
>UNIPROTKB|F1S9V4 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:CU693433 Ensembl:ENSSSCT00000002836
ArrayExpress:F1S9V4 Uniprot:F1S9V4
Length = 1333
Score = 416 (151.5 bits), Expect = 8.5e-66, Sum P(2) = 8.5e-66
Identities = 108/306 (35%), Positives = 161/306 (52%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E ++LVFLPG +IN + LL N + + + PLHS V +Q VF P PG R
Sbjct: 391 ERSSVLVFLPGLGEINCMHE-LLTNMVHK---RLQVYPLHSSVTLEEQNNVFLSPVPGYR 446
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA-GRAG 678
K+ILSTNIAE+++T+ DV YVID + D N +L+ SW SK S QR GRAG
Sbjct: 447 KVILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKEGRAG 506
Query: 679 RCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
R G CY L + S+PD +PE+ R P+ L++KLLD L L PP
Sbjct: 507 RVSKGYCYRLVPKDFWDTSIPDHVIPEMLRCPLGSTILKLKLLDMG-EPRALLATALSPP 565
Query: 738 VSVTIRNAIIVLQDIGALSL-----DE-----KVTELGEKLGCLSVHPLMSKMLFFAILM 787
I I++L+++GAL++ DE ++T LG L L V+ + K++ +
Sbjct: 566 SLGDIERTILLLKEVGALAVRGPRDDENPHDGELTFLGRVLAHLPVNQQLGKLIVLGHVF 625
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
CLD L +A + ++ F +P + + F +S +SD +A++ AF+ W+
Sbjct: 626 GCLDECLIIAASLSLKNFFAMPFRQHLDGYRSKMNFSGSS----KSDCIALVEAFKAWQT 681
Query: 848 AKQRGQ 853
+QRG+
Sbjct: 682 CRQRGE 687
Score = 350 (128.3 bits), Expect = 8.5e-66, Sum P(2) = 8.5e-66
Identities = 91/263 (34%), Positives = 142/263 (53%)
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPI+ K+ + S ++SN VV+I G TG GK+TQ+PQ++L+ + C IV TQPR+I
Sbjct: 139 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYILDRSVQRSTYCNIVVTQPRKIG 198
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
A+S+A IS ER +G +GY++ LE + + +++ T GVLL+ +VS
Sbjct: 199 ASSIARWISKERAWTLGGLVGYQVGLEKIATEDTKLIYMTTGVLLQKIVS---------- 248
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-LRLILMSATLDADRFSQ 366
AK + THI +DE+HER DF+L ++R +L + ++++LMSAT+ F+
Sbjct: 249 ---AKS-LMEFTHIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFAD 304
Query: 367 YFG---------GCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPEL 417
YF C V +V G Y V+ YL+D+ + + S HL E+P +
Sbjct: 305 YFAVPVQNELNPAC-VYEVEGEPYAVEECYLDDLEHLHRGRLSPHL--------LEEPAI 355
Query: 418 TEENKSTLDEAISLAWSNDEFDM 440
E + A+SL D+ DM
Sbjct: 356 PTE---IYEVAVSLIQLFDDLDM 375
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 410 (149.4 bits), Expect = 9.5e-66, Sum P(3) = 9.5e-66
Identities = 112/377 (29%), Positives = 188/377 (49%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQ 606
++Q L+ I + G IL+F+PG EDI T D+++ + ++P++S +PS
Sbjct: 759 VKQALQ-IHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPALAVLPIYSQLPSDL 817
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F++ P G RK I++TNIAET++T+D +++V+DSG K K ++P + LQ +S
Sbjct: 818 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPIS 877
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
+A+A QRAGRAGR G CY LY+Q + + +PEI+R + + L +K L
Sbjct: 878 QANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSL----G 933
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
++D L +DPP + N++ L +GAL +T G + + P +SKML +
Sbjct: 934 VQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVS 993
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
M C L + F P E+ KF + +SD L + +
Sbjct: 994 CDMSCSADILIIVSMLSVPSIFYRPKGREEESDQVREKFSVP-----ESDHLTYLNVYLQ 1048
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
WKN W C+ +F+ + M + +R QL+ +++ ++ SC + V
Sbjct: 1049 WKNNNY--SSIW-CNDHFIHTKAMRKVREVRAQLKDIMVQQKM---NLISCGSDWDV--- 1099
Query: 905 IHAVLMAGLYPMVARLR 921
I + A + A+L+
Sbjct: 1100 IRKCICAAYFHQAAKLK 1116
Score = 365 (133.5 bits), Expect = 9.5e-66, Sum P(3) = 9.5e-66
Identities = 93/271 (34%), Positives = 152/271 (56%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + ++E+R LPI + + + + + N +V++ GETG GKTTQ+ Q+L E ++
Sbjct: 551 AKKKTLLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSYGM 610
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
+ CTQPRR++A SVA+R+S E N+G+ +GY IR E + + I + T+G+LLR
Sbjct: 611 --VGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLR-- 666
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+E+ D SA +I+DE HER +D + ++R+++ L+LI+
Sbjct: 667 -----ESLRESD----LDHYSA---VIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVT 714
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL----ED-VLSILKSAESNHLDSAS--- 407
SAT+D+D+F+ +FG P+ +PG T+PV + ED V + +K A HL
Sbjct: 715 SATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMVGDI 774
Query: 408 -LIVPN-EDPELTE----ENKSTLDEAISLA 432
+ +P ED E+T E + L+ A +LA
Sbjct: 775 LIFMPGQEDIEVTSDQIVERLADLENAPALA 805
Score = 41 (19.5 bits), Expect = 9.5e-66, Sum P(3) = 9.5e-66
Identities = 25/90 (27%), Positives = 35/90 (38%)
Query: 64 VCKKMGMTSKSSGRGKQRRVSVC-----KSKKRVETDKGKEILPSLTFSEGSKLVLQDLF 118
V KK T + R R S+ ++KR E + GKE L + SK+ +
Sbjct: 24 VKKKSAATEQHVFRAPAPRTSLLGLDLLAAQKRKERE-GKERLDDQP--KKSKVSSYKDW 80
Query: 119 THYPPDDGEPGEKLDANQSRKSDKTRGKRV 148
D G E + +SR K R RV
Sbjct: 81 EEGKSDSGSDDENQEDGESRNGKKERKYRV 110
Score = 37 (18.1 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 516 KHMENA--LSDSMKQQLLDKYLATVNPEL----IDLVLIEQLLRKICMDSEDGAILV 566
K+M + L +S+++ LD Y A + E ++ ++ LLR++ D ++V
Sbjct: 657 KYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIV 713
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 390 (142.3 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 137/448 (30%), Positives = 211/448 (47%)
Query: 558 DSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
++ DG ILVF+ G EDI T D + D I P++S +P QKK+F +
Sbjct: 579 NANDGDILVFMTGQEDIEITCDLIKEKLNLLEDPPPLDIFPIYSTMPQDLQKKIFNKTNL 638
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
RK++++TNIAET++T+D + YVID G +K K Y+P + TLQ +S A+A QR+GR
Sbjct: 639 QRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGR 698
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQ----VPEIKRIPIEELCLQVKLLDPNCNIEDFLQK 732
AGR AGI Y LY++ A+ PD +PEI+R + + L +K L N +I F
Sbjct: 699 AGRTGAGIAYRLYTE--KATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVN-DINSF--P 753
Query: 733 TLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMD--CL 790
LDPP + ++ L IGAL ++T+LG + + P ++K++ + + C
Sbjct: 754 FLDPPPKDLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCS 813
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK-NA- 848
+ +T+ + F P K+RA A +SD L ++ F W N
Sbjct: 814 EEVVTIVAMLSVPNIFNRP-----KERANEADMAREKFIISESDHLTLLNVFNQWNINLN 868
Query: 849 KQRGQEA----WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
K +G W C++ F+ + ++ QL + KN ++
Sbjct: 869 KFKGNYTKINNW-CNKNFLQLKSLYRAKDIKHQLMLIMKKNKL-------AILKSKTDDD 920
Query: 905 IHAVLMAGLYPMVARLRPPHKNGR-RFVETAGG-AKVRLHPHS--LNFKLSFKKTDDCPL 960
I L A Y A+L + NG+ FV K+ LHP S L+ LS T+
Sbjct: 921 IRKCLCASFYQQSAKLTKMNLNGQPEFVNLRHSYMKMFLHPTSSLLDSNLS---TN---Y 974
Query: 961 MVYDEITRGDGGMHVRNC-TVVGPLPLL 987
++Y E+ NC T V P+ LL
Sbjct: 975 VIYHELVLTK--KEYMNCVTTVDPIWLL 1000
Score = 372 (136.0 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 94/270 (34%), Positives = 150/270 (55%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRI---EKDANLRQ-----IVEERSK 187
Q+R+S + R + + S + + T I EK+A++ + I ++R
Sbjct: 298 QNRRSKRERALQAKEAAGVENSNIGSIIDTANTTEEIKQEEKNADVNETKHQDIQQQRKS 357
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-----HIWSKGETCKIVCTQ 242
LP + ++ + +T+ NQV ++ GETG GKTTQ+ QFL E +I GE I CTQ
Sbjct: 358 LPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNGEKRIIACTQ 417
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGVS 301
PRR++A SVA+R+S E +G+ +GY IR E K K + I + T G+LLR +++
Sbjct: 418 PRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLREILAD--- 474
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
P + S II+DE HER +D +L + +++L L+LI+ SAT++A
Sbjct: 475 --------PMLANYSC---IIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNA 523
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+RF+++FG P +PG T+PV+ F+ DV
Sbjct: 524 NRFTKFFGVAPQFHIPGRTFPVEVFFNRDV 553
Score = 46 (21.3 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 23/82 (28%), Positives = 34/82 (41%)
Query: 385 SFYLEDVLSILKSAESNH---LDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDML 441
S Y++ + I +S SN L S + N P L K L+ ++ W+ D L
Sbjct: 720 SMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKDLLNCSLYDLWAIGALDNL 779
Query: 442 LELVSLEGSPNVYNYQHTLTGL 463
EL L S + + TL L
Sbjct: 780 GELTKLGHSMTQFPIEPTLAKL 801
Score = 37 (18.1 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 419 EENKSTLDEAISLAWSNDEFDM 440
+E+K +D+ + L +D+F++
Sbjct: 69 KEDKPIVDDDLDLDLDDDDFNL 90
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 396 (144.5 bits), Expect = 1.9e-65, Sum P(2) = 1.9e-65
Identities = 112/377 (29%), Positives = 187/377 (49%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV-IIPLHSMVPSVQ 606
++Q L+ + + +G +L+F+PG EDI T + L D + + I+P++S +PS
Sbjct: 730 VKQALQ-VHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDL 788
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F++ G RK +++TNIAET++T+D ++YVIDSG K K Y+P + LQ +S
Sbjct: 789 QAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPIS 848
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
+A+A QR+GRAGR G Y LY+Q + L VPEI+R + L +K L
Sbjct: 849 QANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSL----G 904
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
+ D LQ +DPP I N++ L +GAL +T LG ++ + P +ML A
Sbjct: 905 VVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVA 964
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
M C L + F P ++ KF+ +SD L + ++
Sbjct: 965 CRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRP-----ESDHLTYLNVYQQ 1019
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
W+ Q + +C+++F+ M + +R+QL+ + + V SC + I
Sbjct: 1020 WR---QNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNL---SVISCGIDW---DI 1070
Query: 905 IHAVLMAGLYPMVARLR 921
+ + + + ARL+
Sbjct: 1071 VRKCICSAYFYQAARLK 1087
Score = 366 (133.9 bits), Expect = 1.9e-65, Sum P(2) = 1.9e-65
Identities = 96/268 (35%), Positives = 151/268 (56%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ I E+R LP+ + + + + + N V++I GETG GKTTQ+ Q+L E +SK I
Sbjct: 525 KTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGM--I 582
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
CTQPRR++A SVA+R+S E +G+++GY IR E + + I + T+G+LLR
Sbjct: 583 GCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLR----- 637
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
E+ P D SA II+DE HER +D + ++R+++ L+LI+ SAT
Sbjct: 638 ------ESLRDPELDSYSA---IIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSAT 688
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFY----LED-VLSILKSAESNHL--DSASLIV- 410
+D+ +F+ +FG P +PG T+PV + ED V S +K A HL + +++
Sbjct: 689 MDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIF 748
Query: 411 -PN-EDPELT----EENKSTLDEAISLA 432
P ED E+T EE + +D A +L+
Sbjct: 749 MPGQEDIEVTCEVLEERLAEIDNAPALS 776
Score = 55 (24.4 bits), Expect = 9.6e-33, Sum P(2) = 9.6e-33
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 412 NEDPELTEENKSTLDEAISLAWSNDEFDM-LLELVSL 447
N D EL E N+ ++L ND+FD LE V L
Sbjct: 370 NRDNELWERNRMLTSGVVTLISVNDDFDEEALERVHL 406
Score = 47 (21.6 bits), Expect = 6.6e-32, Sum P(2) = 6.6e-32
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 414 DPELTEENKSTLDEAISLAWSNDE-FDMLLELVS 446
DPEL + +DEA + S D F +L E+V+
Sbjct: 642 DPELDSYSAIIMDEAHERSLSTDVLFGLLREIVA 675
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 379 (138.5 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 122/402 (30%), Positives = 195/402 (48%)
Query: 560 EDGAILVFLPGWEDINKTRDR--LLANPFFR--DTSKFVIIPLHSMVPSVQQKKVFK-RP 614
++G IL+FL G E+I + L + R D + L+ +P Q+++F+ P
Sbjct: 308 DEGDILLFLTGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAP 367
Query: 615 PP---GCR---KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
PP G R K+I+STNIAET++TID +VYV+D G K+K Y+P V +L S +SKA
Sbjct: 368 PPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKA 427
Query: 669 SAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE 727
SA+QRAGRAGR + G C+ LY++ L D PEI R + L++K L I+
Sbjct: 428 SAQQRAGRAGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKL----GID 483
Query: 728 DFLQKTL-DPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
D + L DPP T+ A+ L + L D +T LG + P ++ ML +
Sbjct: 484 DLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPE 543
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGG-QSDQLAVIAAFECW 845
C + L++ F P S ++KRA E+ +L+ D L ++ A+ +
Sbjct: 544 FYCSNEILSITALLSVPQIFVRPAS--QRKRAD----EMKNLFAHPDGDHLTLLNAYHAF 597
Query: 846 KNAK-QRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
K+ + Q + W C +F+S + +R QL + + E +S+ + +
Sbjct: 598 KSPEAQENPKQW-CHDHFLSLRSLQSADNVRMQLLRIMEREEL--EMISTSFEDKKYYEN 654
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
I L AG + VA+ K+ ++ V LHP ++
Sbjct: 655 IRRALCAGFFMQVAKKENQGKS--MYMTIKDHQNVLLHPSTV 694
Score = 374 (136.7 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 89/262 (33%), Positives = 143/262 (54%)
Query: 133 DANQSRKSDKTRGKRVDIFCKPKMSK--AEIAMKVES-----LTSRIEKDANLRQIVEER 185
D + + S + F K + K A A KVE T+R + I++ R
Sbjct: 38 DTSSNGNSSSQADNKNSAFAKLQRHKTTAAQAQKVEDNEFNPFTNR-PYSSKYFSILKTR 96
Query: 186 SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRR 245
LP+ + +D +Q+++ GETG GKTTQ+PQF+L + + I CTQPRR
Sbjct: 97 RDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIACTQPRR 156
Query: 246 ISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKE 305
++A SVA+R++ E +G+ +GY IR E + + + T+G+LLR E
Sbjct: 157 VAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLR-----------E 205
Query: 306 ASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFS 365
A N ++S + II+DE HER +D ++ ++++++ P L++I+MSATLDA +F
Sbjct: 206 AMND---HELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQ 262
Query: 366 QYFGGCPVIQVPGFTYPVKSFY 387
+YF P++ VPG T+PV+ FY
Sbjct: 263 RYFNDAPLLAVPGRTHPVEIFY 284
Score = 38 (18.4 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 1066 QIYCLRERLSVAILFKVTHPQKALPP 1091
+ YC E LS+ L V PQ + P
Sbjct: 543 EFYCSNEILSITALLSV--PQIFVRP 566
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 481 (174.4 bits), Expect = 5.9e-65, Sum P(3) = 5.9e-65
Identities = 117/332 (35%), Positives = 180/332 (54%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G +LVFL G +I + A+ R + ++V++PLHS + Q KVF PPG R
Sbjct: 377 ERGDLLVFLSGLAEIGAVLEAAQAHA--RRSGRWVVLPLHSTLSVAAQDKVFDVAPPGVR 434
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K ILSTNIAET++TID + +V+DSG++KE SYDP + LQ W+S+ASA+QR GRAGR
Sbjct: 435 KCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGR 494
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
G+C+ LY++ + + VPEI+R+ ++ L LQ+K + + F ++PP +
Sbjct: 495 TGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVG-DPRTF--PFIEPPPA 551
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++ AI+ L+D GAL E +T +G L L V ++ KML ++ +P LT+A A
Sbjct: 552 ASLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAA 611
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ-RGQEA--W 856
+ PFT N K A L S +G D + F W K R ++ W
Sbjct: 612 LSVQSPFTRSTRSNPK----CAWRALESDHG---DPFTLFNVFNNWVQVKSDRSTKSRRW 664
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
C + + + + +R+Q + L +G +
Sbjct: 665 -CRREGIEEHRLYEMANLRRQFKELLEDHGLL 695
Score = 282 (104.3 bits), Expect = 5.9e-65, Sum P(3) = 5.9e-65
Identities = 61/150 (40%), Positives = 87/150 (58%)
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
+ CTQPRRI+ S+A+R+ +E G +GY+IR ES + IVF T G+LLR
Sbjct: 207 VACTQPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR---- 262
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+P L IVDE+HER ++DF+L +++ +LP P L++ILMSA
Sbjct: 263 -------HVQREPTLPQYRVL---IVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSA 312
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
T++ FS YFG PV+QVPG +P+ Y
Sbjct: 313 TVNTSLFSAYFGQAPVVQVPGRLFPITVVY 342
Score = 261 (96.9 bits), Expect = 9.4e-63, Sum P(3) = 9.4e-63
Identities = 54/118 (45%), Positives = 78/118 (66%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A L ++ ER+ LPIS ++D I T+ +QVV+++G+TGCGK+TQVPQ+LL +S
Sbjct: 150 ARLARLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH--- 206
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
+ CTQPRRI+ S+A+R+ +E G +GY+IR ES + IVF T G+LLR
Sbjct: 207 --VACTQPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR 262
Score = 41 (19.5 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 482 LSLGADCQLKAKDGRTALQLGEQENQPEV--AQI-IKKHMENALSDSMKQ 528
L DC DG LQL + E+ + A + ++ E+A+ + Q
Sbjct: 908 LDTNGDCSRLVADGWLELQLADGESAVRLLAATLRLRAQWESAMDGQLAQ 957
Score = 39 (18.8 bits), Expect = 5.9e-65, Sum P(3) = 5.9e-65
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRR 929
++ VL GLYP A + P + R+
Sbjct: 796 LLKLVLARGLYPQFA-IPDPFNSSRK 820
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 488 (176.8 bits), Expect = 7.0e-65, Sum P(3) = 7.0e-65
Identities = 114/336 (33%), Positives = 184/336 (54%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G +L+FL G +I+ ++ + T +++++PLHS + QQ KVF PPG R
Sbjct: 377 ERGDLLLFLSGVAEISTIQEA--CQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGVR 434
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K I+STNIAET++TID V +V+DSG++KE S+DP + LQ W+S+AS++QR GRAGR
Sbjct: 435 KCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGR 494
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT-LDPPV 738
G+CY LYS+ + + VPEI R+ ++ L LQ+K + + D T +DPP
Sbjct: 495 TGPGVCYRLYSESDYDAFAPYPVPEIHRVALDSLILQMKSM----GLGDPRTFTFIDPPP 550
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
+ +I+ A+ L++ GAL ++T +G L L V ++ KML + + ++P LT+A
Sbjct: 551 ASSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAA 610
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ---RGQEA 855
A + PF N + A+ L S +G D ++ F W K G
Sbjct: 611 ALSVQSPFLRSAQHNPD--CSTARQPLNSNHG---DPFTLMNTFNAWVQVKADRGSGSRK 665
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
W C + + + ++ +R+Q + L +G + +D
Sbjct: 666 W-CRRRGLEEQRLYEMVNLRRQFKELLRSHGLLEDD 700
Score = 274 (101.5 bits), Expect = 7.0e-65, Sum P(3) = 7.0e-65
Identities = 60/150 (40%), Positives = 89/150 (59%)
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I CTQPRRI+ S+A+R+S E G +GY+IR E+ + ++F T G+LLR +
Sbjct: 207 IACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQ- 265
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
++AS + +IVDE+HER + DF+L ++R +L P LRL+LMSA
Sbjct: 266 ------QDAS-------LGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSA 312
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
T++ FS YF PV+QVPG +P++ Y
Sbjct: 313 TINIKLFSSYFNDAPVLQVPGRLFPIQVIY 342
Score = 236 (88.1 bits), Expect = 6.6e-61, Sum P(3) = 6.6e-61
Identities = 49/118 (41%), Positives = 75/118 (63%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
+ L ++ E+ LPI ++D I V ++ VV+++G+TGCGK+TQVPQ+LL + G
Sbjct: 150 SKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLL----ASGIN 205
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
I CTQPRRI+ S+A+R+S E G +GY+IR E+ + ++F T G+LLR
Sbjct: 206 -NIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLR 262
Score = 39 (18.8 bits), Expect = 7.0e-65, Sum P(3) = 7.0e-65
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 904 IIHAVLMAGLYPMVARLRPPH----KNGRRFVETAGGAKVRLHPHSL 946
++ +L GLYP +A + H K+ + T V +HP S+
Sbjct: 808 LLKLLLCRGLYPQLA-IPDEHNATRKDSDQVFHTRNKQGVVIHPTSV 853
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 424 (154.3 bits), Expect = 7.3e-65, Sum P(2) = 7.3e-65
Identities = 125/413 (30%), Positives = 212/413 (51%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I +E ++ KI DG IL FL G E++ L+ A R
Sbjct: 241 YLQSPVPDYIKST-VETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 298
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K +
Sbjct: 299 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 358
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L + VS+ASA QRAGRAGR ++G CY LY++ LP VPE++R
Sbjct: 359 AYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSN 418
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKL 768
+ + LQ+K L + N+ F + PP + ++ A+ +L +G L D ++TE LG ++
Sbjct: 419 LAPVILQLKALGID-NVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRV 475
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
++P+ +KML + C L++A ++ F +P N+K +A + A
Sbjct: 476 AEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP--GNQKSQAIRVHRKFAVE 533
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
G D L ++ +E + + Q W C ++F++ + +R+QL+ L+K +
Sbjct: 534 EG---DHLTMLNVYEAFIKHNKNSQ--W-CQEHFLNYKGLIRAATVREQLKKLLVKFQ-V 586
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRL 941
P+ S P + +++G + AR R + A+V L
Sbjct: 587 PKKSSEGD-----PDPVLRCIVSGFFANAARFHSTGAYSRTLAHSGREAQVHL 634
Score = 318 (117.0 bits), Expect = 7.3e-65, Sum P(2) = 7.3e-65
Identities = 86/254 (33%), Positives = 136/254 (53%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S+ ++ S T+ + I ++R KLP+ ++ I V++ Q V+I GETGC
Sbjct: 14 ISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGC 73
Query: 216 GKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLES 275
GK+TQ+PQ+L E W+ E + TQPRR++A +VA R++ ERG +G +GY IR +
Sbjct: 74 GKSTQIPQYLAEAGWT-AEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDD 132
Query: 276 KGGKHSS-IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
++ I F T+G+L+R E P SA I++DE HER Y+D
Sbjct: 133 CTDPLATRIKFLTDGMLVR-----------EMMVDPLLTKYSA---IMLDEAHERTLYTD 178
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG----------CPVIQVPGFTYPVK 384
+ +++ + LRL++ SATLDA++F +F C ++ V G T+PV
Sbjct: 179 IAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVD 238
Query: 385 SFYLED-VLSILKS 397
FYL+ V +KS
Sbjct: 239 IFYLQSPVPDYIKS 252
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 379 (138.5 bits), Expect = 8.4e-65, Sum P(2) = 8.4e-65
Identities = 124/418 (29%), Positives = 200/418 (47%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKT--RDRLLANPFFRD--TSK 592
T PE L + + +I ++ G ILVFL G E+I + L A+ R+
Sbjct: 261 TQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGP 320
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGC-----RKIILSTNIAETAITIDDVVYVIDSGRMK 647
+ PL+ +P QQ+++F+ P RK+++STNIAET++TID +VYV+D G K
Sbjct: 321 LKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSK 380
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIK 706
+K Y+P V +L S +SKASA+QRAGRAGR + G C+ LY++ L + PEI
Sbjct: 381 QKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEIL 440
Query: 707 RIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELG 765
R + L++K L I+D + +DPP T+ A+ L + L + +T LG
Sbjct: 441 RSNLSSTVLELKKL----GIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNGDLTPLG 496
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
K + P ++ ML + C + L+L + F P S +K A + +
Sbjct: 497 RKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSA--RKLADEMRQQF 554
Query: 826 ASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G D L ++ + +K+ + G W C +F+S + +RKQL+ + +
Sbjct: 555 THPDG---DHLTLLNVYHAYKSGE--GTADW-CWNHFLSHRALISADNVRKQLRRTMERQ 608
Query: 886 GFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHP 943
E +S+ + I L++G + VA+ NG+ +V V LHP
Sbjct: 609 EV--ELISTPFDDKNYYVNIRRALVSGFFMQVAK---KSANGKNYVTMKDNQVVSLHP 661
Score = 368 (134.6 bits), Expect = 8.4e-65, Sum P(2) = 8.4e-65
Identities = 77/214 (35%), Positives = 128/214 (59%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC 236
N +I+E R +LP+ ++ NQ+++ GETG GKTTQ+PQF+L
Sbjct: 64 NYFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNT 123
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
+I CTQPRR++A SVA+R++ E ++G+ +GY IR E G ++ + + T+G+LLR +
Sbjct: 124 QIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAM 183
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
+ + +S + II+DE HER +D ++ +++ + P L++I+MS
Sbjct: 184 TDHM--------------LSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMS 229
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
ATLDA +F +YF P++ VPG TYPV+ +Y ++
Sbjct: 230 ATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQE 263
Score = 41 (19.5 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 466 LMVLAGKGRVGDVCMLLSLGAD 487
L+ L G+ + D C ++L AD
Sbjct: 289 LVFLTGEEEIEDACRKITLEAD 310
Score = 40 (19.1 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 226 LEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
L H+ + ++ ++V ++ AT+VA+ E G N
Sbjct: 17 LAHLNNGDDSEEVVSSKGLTRRATTVAQAAKAEEGPN 53
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 416 (151.5 bits), Expect = 8.9e-65, Sum P(3) = 8.9e-65
Identities = 122/414 (29%), Positives = 208/414 (50%)
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK----FVII 596
+ ++ LI L I ++ G ILVFL G ++IN T +L + S +I+
Sbjct: 821 DYVEASLITVL--NIHLNEHPGDILVFLTGQDEIN-TACEILHERMKKLESMSPPPLIIL 877
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
P++S +PS Q +F+ PPGCRK IL+TNIAE ++TID + +VID G K K YD +
Sbjct: 878 PIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRD 937
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCL 715
+ +L + +SKA+AKQRAGRAGR G CY LY++ + + + VPEI+RI + + L
Sbjct: 938 MDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVL 997
Query: 716 QVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
+K L I DFL +D P T+ +++ L +GAL + +T+LG+K+ +
Sbjct: 998 LLKAL----GINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPME 1053
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P +SK+L ++ +C D +T+ ++ F P + +A A + Q D
Sbjct: 1054 PNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRP-----QNKALLADKKKNKFIMPQGD 1108
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
+ + + WK + ++C + F+ S + +RKQ+ + K + + +S
Sbjct: 1109 LITYLNIYNKWK---ENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTS 1165
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ + I ++ +G + V + R + + +V +HP S F
Sbjct: 1166 KNDATKYVNICKSIC-SGYFNHVCK-RDTQQG---YTTLLTNQQVFIHPSSTLF 1214
Score = 353 (129.3 bits), Expect = 8.9e-65, Sum P(3) = 8.9e-65
Identities = 82/236 (34%), Positives = 137/236 (58%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC 236
N I E+RSKLPI + K+ + ++ N V+++ GETG GKTTQ+PQ+L E ++ E
Sbjct: 620 NTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYT--EKG 677
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
+ CTQPRR++A S+A+R+S E G +G +GY IR + + I + T+G+LLR +
Sbjct: 678 IVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETL 737
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
S + ++ + II+DE HER +D + +++D++ +LI+ S
Sbjct: 738 SDTL--------------LTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTS 783
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
ATLDA++FS YF P+ +PG +PV+ + K ES++++++ + V N
Sbjct: 784 ATLDAEKFSTYFFNSPIFTIPGKIFPVEILHS-------KEPESDYVEASLITVLN 832
Score = 75 (31.5 bits), Expect = 6.4e-29, Sum P(3) = 6.4e-29
Identities = 35/168 (20%), Positives = 73/168 (43%)
Query: 832 QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
Q D + + + WK + ++C + F+ S + +RKQ+ + K + +
Sbjct: 1106 QGDLITYLNIYNKWK---ENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKK 1162
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLS 951
+S + + I ++ +G + V + R + + +V +HP S F +
Sbjct: 1163 STSKNDATKYVNICKSIC-SGYFNHVCK-RDTQQG---YTTLLTNQQVFIHPSSTLFNKN 1217
Query: 952 FKKTDDCPL-MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPA 998
PL +VY E+ + ++R+CT++ P L+ LA + + PA
Sbjct: 1218 -------PLFVVYHELVLTNKE-YIRDCTIIQPQWLIQLAPNLFI-PA 1256
Score = 38 (18.4 bits), Expect = 8.9e-65, Sum P(3) = 8.9e-65
Identities = 19/112 (16%), Positives = 45/112 (40%)
Query: 42 SKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEIL 101
+K++ + + ++ + ++ + + +S R K++ S SK + + K+I
Sbjct: 146 TKEKKESIEITSKQKKNSDINVTTRDLSDSSYQKKRRKKKNSSGGSSKNTESSFETKDIK 205
Query: 102 PSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCK 153
+ G K + + Y D E +N+ R S + R + + K
Sbjct: 206 KDNKYESGKKRKYDERY--Y---DRHSKEHHHSNKHRHSKEHRHSKEHLHSK 252
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 416 (151.5 bits), Expect = 8.9e-65, Sum P(3) = 8.9e-65
Identities = 122/414 (29%), Positives = 208/414 (50%)
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK----FVII 596
+ ++ LI L I ++ G ILVFL G ++IN T +L + S +I+
Sbjct: 821 DYVEASLITVL--NIHLNEHPGDILVFLTGQDEIN-TACEILHERMKKLESMSPPPLIIL 877
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
P++S +PS Q +F+ PPGCRK IL+TNIAE ++TID + +VID G K K YD +
Sbjct: 878 PIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRD 937
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCL 715
+ +L + +SKA+AKQRAGRAGR G CY LY++ + + + VPEI+RI + + L
Sbjct: 938 MDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVL 997
Query: 716 QVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
+K L I DFL +D P T+ +++ L +GAL + +T+LG+K+ +
Sbjct: 998 LLKAL----GINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPME 1053
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P +SK+L ++ +C D +T+ ++ F P + +A A + Q D
Sbjct: 1054 PNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRP-----QNKALLADKKKNKFIMPQGD 1108
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
+ + + WK + ++C + F+ S + +RKQ+ + K + + +S
Sbjct: 1109 LITYLNIYNKWK---ENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTS 1165
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ + I ++ +G + V + R + + +V +HP S F
Sbjct: 1166 KNDATKYVNICKSIC-SGYFNHVCK-RDTQQG---YTTLLTNQQVFIHPSSTLF 1214
Score = 353 (129.3 bits), Expect = 8.9e-65, Sum P(3) = 8.9e-65
Identities = 82/236 (34%), Positives = 137/236 (58%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC 236
N I E+RSKLPI + K+ + ++ N V+++ GETG GKTTQ+PQ+L E ++ E
Sbjct: 620 NTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYT--EKG 677
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
+ CTQPRR++A S+A+R+S E G +G +GY IR + + I + T+G+LLR +
Sbjct: 678 IVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETL 737
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
S + ++ + II+DE HER +D + +++D++ +LI+ S
Sbjct: 738 SDTL--------------LTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTS 783
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
ATLDA++FS YF P+ +PG +PV+ + K ES++++++ + V N
Sbjct: 784 ATLDAEKFSTYFFNSPIFTIPGKIFPVEILHS-------KEPESDYVEASLITVLN 832
Score = 75 (31.5 bits), Expect = 6.4e-29, Sum P(3) = 6.4e-29
Identities = 35/168 (20%), Positives = 73/168 (43%)
Query: 832 QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
Q D + + + WK + ++C + F+ S + +RKQ+ + K + +
Sbjct: 1106 QGDLITYLNIYNKWK---ENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKK 1162
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLS 951
+S + + I ++ +G + V + R + + +V +HP S F +
Sbjct: 1163 STSKNDATKYVNICKSIC-SGYFNHVCK-RDTQQG---YTTLLTNQQVFIHPSSTLFNKN 1217
Query: 952 FKKTDDCPL-MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPA 998
PL +VY E+ + ++R+CT++ P L+ LA + + PA
Sbjct: 1218 -------PLFVVYHELVLTNKE-YIRDCTIIQPQWLIQLAPNLFI-PA 1256
Score = 38 (18.4 bits), Expect = 8.9e-65, Sum P(3) = 8.9e-65
Identities = 19/112 (16%), Positives = 45/112 (40%)
Query: 42 SKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEIL 101
+K++ + + ++ + ++ + + +S R K++ S SK + + K+I
Sbjct: 146 TKEKKESIEITSKQKKNSDINVTTRDLSDSSYQKKRRKKKNSSGGSSKNTESSFETKDIK 205
Query: 102 PSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCK 153
+ G K + + Y D E +N+ R S + R + + K
Sbjct: 206 KDNKYESGKKRKYDERY--Y---DRHSKEHHHSNKHRHSKEHRHSKEHLHSK 252
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 419 (152.6 bits), Expect = 9.8e-65, Sum P(2) = 9.8e-65
Identities = 120/391 (30%), Positives = 203/391 (51%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I +E ++ KI DG +L FL G E++ L+ A R
Sbjct: 249 YLQSPVPDYIKST-VETVV-KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K +
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L VS+ASA QRAGR GR ++G CY LY++ LP VPE++R
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 426
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKL 768
+ + LQ+K L + N+ F + PP + ++ A+ +L +G L D ++TE LG ++
Sbjct: 427 LAPVILQLKALGID-NVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRI 483
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
++P+ +KML + C L++A ++ F +P PN+K A + A
Sbjct: 484 AEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP--PNQKSHAIRVHRKFAVE 541
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
G D L ++ +E + K W C ++F++ + +R+QL+ L+K +
Sbjct: 542 EG---DHLTMLNIYEAF--IKHNKDSKW-CQEHFLNYKGLVRAATVREQLKKLLVKFQ-V 594
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVAR 919
P S P ++ +++G + AR
Sbjct: 595 PRKSSEGD-----PDLVLRCIVSGFFANAAR 620
Score = 321 (118.1 bits), Expect = 9.8e-65, Sum P(2) = 9.8e-65
Identities = 82/229 (35%), Positives = 131/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I ++R KLP+ ++ I +++ Q V+I GETGCGK+TQ+PQ+L E W+ E +
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWT-AEGRVVGV 105
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLVSQG 299
TQPRR++A +VA R++ ERG +G +GY IR + + ++ I F T+G+L+R ++
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMM--- 162
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
V L ++ + I++DE HER Y+D + +++ + LRLI+ SATL
Sbjct: 163 VDPL-----------LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 360 DADRFSQYFGG----------CPVIQVPGFTYPVKSFYLED-VLSILKS 397
DAD+F +F C ++ V G T+PV FYL+ V +KS
Sbjct: 212 DADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKS 260
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 395 (144.1 bits), Expect = 9.9e-65, Sum P(3) = 9.9e-65
Identities = 125/403 (31%), Positives = 195/403 (48%)
Query: 561 DGAILVFLPGWEDINKT--RDRLLANPFFRDTS--KFVIIPLHSMVPSVQQKKVFKRPP- 615
+G IL+FL G E+I + L + R+ + + PL+ +P QQ+K+F+ P
Sbjct: 304 EGDILLFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPT 363
Query: 616 -------PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
PG RK+I+STNIAET++TID +VYV+D G K+K Y+P V +L S +SKA
Sbjct: 364 NPNPNGRPG-RKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKA 422
Query: 669 SAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE 727
SA+QRAGRAGR + G C+ LY++ L + PEI R + L++K L I+
Sbjct: 423 SAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKL----GID 478
Query: 728 DFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
D + +DPP T+ A+ L + LS + +T LG + P+++ ML +
Sbjct: 479 DLVHFDFMDPPAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIGSPA 538
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW- 845
C + LT+ + F P S +KRA AK A G D L +I +E +
Sbjct: 539 YSCSEEILTIVAMLSVPNVFVRPASA--RKRADEAKLSFAQADG---DHLTLINVYEAFI 593
Query: 846 -KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-IPEDVSSCSHNARVPG 903
A + G W C F+S + +R QLQ + K + + S
Sbjct: 594 SPEASEIGTHKW-CRDNFLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQVSEFEYWEN 652
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
+ A L+AG + VA+ + +K ++ V +HP ++
Sbjct: 653 VKKA-LVAGFFMQVAKKKSGNKG---YLTVKDNQDVLIHPSTV 691
Score = 357 (130.7 bits), Expect = 9.9e-65, Sum P(3) = 9.9e-65
Identities = 77/211 (36%), Positives = 125/211 (59%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL----EHIWSKGETC 236
I++ R LP+ + ++ S Q+++ GETG GKTTQ+PQF+L H+ K
Sbjct: 87 ILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGK---- 142
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
++ CTQPRR++A SVA R++ E +G+ +GY IR E+ G + + + T+G+LLR
Sbjct: 143 QVACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLR--- 199
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
EA D++ + II+DE HER +D ++ +++ + P L++I+MS
Sbjct: 200 --------EAMED---HDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMS 248
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ATLDA++F YF P++ VPG T+PV+ +Y
Sbjct: 249 ATLDAEKFQNYFNNAPLLAVPGRTHPVEIYY 279
Score = 41 (19.5 bits), Expect = 9.9e-65, Sum P(3) = 9.9e-65
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 466 LMVLAGKGRVGDVCMLLSLGAD 487
L+ L G+ + D C +SL D
Sbjct: 308 LLFLTGEEEIEDACRKISLEGD 329
Score = 39 (18.8 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 413 EDPELTEENKSTLDEAISLAWSNDEFDMLLELVSL 447
ED +LT + LDEA + D LL+ VS+
Sbjct: 203 EDHDLTRYSCIILDEAHERTLATDILMGLLKQVSV 237
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 419 (152.6 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 120/391 (30%), Positives = 203/391 (51%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I +E ++ KI DG +L FL G E++ L+ A R
Sbjct: 249 YLQSPVPDYIKST-VETVV-KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K +
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L VS+ASA QRAGR GR ++G CY LY++ LP VPE++R
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 426
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKL 768
+ + LQ+K L + N+ F + PP + ++ A+ +L +G L D ++TE LG ++
Sbjct: 427 LAPVILQLKALGID-NVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRI 483
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
++P+ +KML + C L++A ++ F +P PN+K A + A
Sbjct: 484 AEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP--PNQKSHAIRVHRKFAVE 541
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
G D L ++ +E + K W C ++F++ + +R+QL+ L+K +
Sbjct: 542 EG---DHLTMLNIYEAF--IKHNKDSKW-CQEHFLNYKGLVRAATVREQLKKLLVKFQ-V 594
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVAR 919
P S P ++ +++G + AR
Sbjct: 595 PRKSSEGD-----PDLVLRCIVSGFFANAAR 620
Score = 321 (118.1 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 82/229 (35%), Positives = 131/229 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I ++R KLP+ ++ I +++ Q V+I GETGCGK+TQ+PQ+L E W+ E +
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWT-AEGRVVGV 105
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLVSQG 299
TQPRR++A +VA R++ ERG +G +GY IR + + ++ I F T+G+L+R ++
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMM--- 162
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
V L ++ + I++DE HER Y+D + +++ + LRLI+ SATL
Sbjct: 163 VDPL-----------LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 360 DADRFSQYFGG----------CPVIQVPGFTYPVKSFYLED-VLSILKS 397
DAD+F +F C ++ V G T+PV FYL+ V +KS
Sbjct: 212 DADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKS 260
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 388 (141.6 bits), Expect = 1.8e-64, Sum P(3) = 1.8e-64
Identities = 84/214 (39%), Positives = 129/214 (60%)
Query: 175 DANLRQIVEE-RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
D + + +E R LP+ +KD + ++ QV+LI ETG GKTTQ+PQFL E ++KG
Sbjct: 404 DVKVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKG 463
Query: 234 ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
KI CTQPRR++A SVA R++ E +G +GY IR E+ + + I + T+G+LLR
Sbjct: 464 NK-KICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLR 522
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
E +P D+++ + II+DE HER ++D + +++D+ P L+++
Sbjct: 523 -----------EFLTEP---DLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVL 568
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
+ SAT+DA++FS YF PV VPG YPV +Y
Sbjct: 569 ISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYY 602
Score = 363 (132.8 bits), Expect = 1.8e-64, Sum P(3) = 1.8e-64
Identities = 97/288 (33%), Positives = 156/288 (54%)
Query: 562 GAILVFLPGWEDINKTRDRL--LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
G ILVFL G ++I + + L + + ++ P+++ +PS Q K+F PPG R
Sbjct: 628 GDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGAR 687
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K++L+TNIAET+ITID V +VIDSG +K+ Y+P + +L S S+ASA QRAGRAGR
Sbjct: 688 KVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGR 747
Query: 680 CQAGICYHLYSQLRAASLPDFQV-PEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
G C+ LY++ + D PEI+R + + L +K L N N+ DF +D P
Sbjct: 748 VGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGIN-NLLDF--DFMDAPP 804
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
T+ ++ +L +GAL+ ++T+LG ++ P++SK L + C++ L++
Sbjct: 805 PETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIV- 863
Query: 799 ASDYRDPFTLPISPNEK-KRATAAKFELASLYGGQSDQLAVIAAFECW 845
S + +L P +K A A+ GG D L ++ + W
Sbjct: 864 -SMLGEASSLFYRPKDKIMEADKARANFTQP-GG--DHLTLLHIWNEW 907
Score = 50 (22.7 bits), Expect = 1.8e-64, Sum P(3) = 1.8e-64
Identities = 33/128 (25%), Positives = 54/128 (42%)
Query: 73 KSSGRGKQRRVSVCKSKKRVETDKGKEILPSLT--FSE--GSKLVLQDLFTHYPPDDGEP 128
KSS + R++ + ++ E ++ L + T F E SK ++L DD E
Sbjct: 169 KSSDP-ETERLNDLREREEFEERLRRKDLEAATNEFVEDYSSKFSSEELALRKLADDPES 227
Query: 129 GEKLDANQSRKSD----KTRGKRVDIFCKPKMSKAEIAMKVESLTS----RIEKDANLRQ 180
KL + +KS K R ++ + ++ E E LT +EK L +
Sbjct: 228 WRKLASELRKKSRQQYLKPRAQQQLEILRREIRDEEQLFAGEKLTQAEIRELEKKKELLR 287
Query: 181 IVEERSKL 188
I EER +L
Sbjct: 288 IAEERQRL 295
Score = 42 (19.8 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 397 SAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGS-PNVYN 455
S E D A ++ +P + E + EA + SN+ + L+ ++G P V
Sbjct: 2 SLEQYVSDKAISLLGMSEPSVVEY---LIAEAKGSSSSNNLYQKLVSF-GMDGDDPAVKE 57
Query: 456 YQHTLTGLTP 465
+ HTL P
Sbjct: 58 FAHTLYARIP 67
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 414 (150.8 bits), Expect = 2.1e-64, Sum P(2) = 2.1e-64
Identities = 115/356 (32%), Positives = 192/356 (53%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I +E ++ KI DG IL FL G E++ L+ A +
Sbjct: 249 YLQSPVPDYIKST-VETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGM 306
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K I+P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K +
Sbjct: 307 KRHLRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L VS+ASA QRAGR GR ++G CY LY++ LP VPE++R
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSN 426
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKL 768
+ + LQ+K L + N+ F + PP + ++ A+ +L +G L D ++TE LG ++
Sbjct: 427 LAPVILQLKALGID-NVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRI 483
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
++P+ +KML + C L++A ++ F +P N+K +A A + A
Sbjct: 484 AEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVP--SNQKSQAIRAHRKFAVE 541
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G D L ++ +E + + Q W C ++F++ + +R+QL+ L+K
Sbjct: 542 EG---DHLTMLNVYEAFIKHNKNSQ--W-CQEHFLNYKGLVRAATVREQLKKLLVK 591
Score = 325 (119.5 bits), Expect = 2.1e-64, Sum P(2) = 2.1e-64
Identities = 85/254 (33%), Positives = 137/254 (53%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S+ ++ S T+ + I ++R KLP+ ++ I +++ Q V+I GETGC
Sbjct: 22 ISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGC 81
Query: 216 GKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLES 275
GK+TQ+PQ+L E W+ E + TQPRR++A +VA R++ ERG +G +GY IR +
Sbjct: 82 GKSTQIPQYLAEAGWT-AEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDD 140
Query: 276 KGGKHSSIVFCTNGVLLRL-LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
CTN + R+ ++ G+ ++E P SA I++DE HER Y+D
Sbjct: 141 ----------CTNPLATRIKFLTDGML-VREMMVDPLLTKYSA---IMLDEAHERTLYTD 186
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG----------CPVIQVPGFTYPVK 384
+ +++ + LRLI+ SATLDA++F +F C ++ V G T+PV
Sbjct: 187 IAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVD 246
Query: 385 SFYLED-VLSILKS 397
FYL+ V +KS
Sbjct: 247 IFYLQSPVPDYIKS 260
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 419 (152.6 bits), Expect = 3.0e-64, Sum P(2) = 3.0e-64
Identities = 115/356 (32%), Positives = 193/356 (54%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I +E ++ KI DG IL FL G E++ L+ A R
Sbjct: 249 YLQSPVPDYIKST-VETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 306
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K +
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L + VS+ASA QRAGRAGR ++G CY LY++ LP VPE++R
Sbjct: 367 AYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSN 426
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKL 768
+ + LQ+K L + N+ F + PP + ++ A+ +L +G L D ++TE LG ++
Sbjct: 427 LAPVILQLKALGID-NVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRV 483
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
++P+ +KML + C L++A ++ F +P N+K +A + A
Sbjct: 484 AEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP--GNQKSQAIRVHRKFAVE 541
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G D L ++ +E + + Q W C ++F++ + +R+QL+ L+K
Sbjct: 542 EG---DHLTMLNVYEAFIKHNKNSQ--W-CQEHFLNYKGLIRAATVREQLKKLLVK 591
Score = 318 (117.0 bits), Expect = 3.0e-64, Sum P(2) = 3.0e-64
Identities = 86/254 (33%), Positives = 136/254 (53%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S+ ++ S T+ + I ++R KLP+ ++ I V++ Q V+I GETGC
Sbjct: 22 ISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGC 81
Query: 216 GKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLES 275
GK+TQ+PQ+L E W+ E + TQPRR++A +VA R++ ERG +G +GY IR +
Sbjct: 82 GKSTQIPQYLAEAGWT-AEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDD 140
Query: 276 KGGKHSS-IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
++ I F T+G+L+R E P SA I++DE HER Y+D
Sbjct: 141 CTDPLATRIKFLTDGMLVR-----------EMMVDPLLTKYSA---IMLDEAHERTLYTD 186
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG----------CPVIQVPGFTYPVK 384
+ +++ + LRL++ SATLDA++F +F C ++ V G T+PV
Sbjct: 187 IAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVD 246
Query: 385 SFYLED-VLSILKS 397
FYL+ V +KS
Sbjct: 247 IFYLQSPVPDYIKS 260
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 399 (145.5 bits), Expect = 3.2e-64, Sum P(2) = 3.2e-64
Identities = 119/391 (30%), Positives = 206/391 (52%)
Query: 537 TVNPELIDLV--LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSK 592
TV+P + D V +E +L KI +DG +L FL G E++ K L A R K
Sbjct: 240 TVSP-VPDYVKATVETVL-KIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMK 297
Query: 593 --FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++P+++ +P +Q +VF+R P RK++++TNIAET+ITI+ VV+VID +K ++
Sbjct: 298 KHLCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRA 357
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
Y+P + +L + +SKASA QRAGRAGR +AG C+ LY++ LP+ VPE++R +
Sbjct: 358 YNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEMQRSNL 417
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKLG 769
+ LQ+K L + N+ F L PP + ++ A+ +L +G L ++T+ +G ++
Sbjct: 418 APVILQLKALGID-NVLRF--SFLSPPPAQSMVQALELLFALGGLDQYGRLTDPMGVRMA 474
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
+ P+ +KML + C +T+A ++ F P N++K A + A
Sbjct: 475 EFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVAP--HNQRKSAAREHRKFAVAE 532
Query: 830 GGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP 889
G D L ++ +E + K + W C +F++ + +R+QL+ L+ +P
Sbjct: 533 G---DHLTMLNVYEAF--IKHQKSSQW-CQDHFLNYKGLLRATAVREQLR-HLLNKFKVP 585
Query: 890 EDVSSCSHNARVPGIIHAVLMAGLYPMVARL 920
S P +I +++G + AR+
Sbjct: 586 RTSSEGD-----PDVILRCIVSGFFANAARM 611
Score = 339 (124.4 bits), Expect = 3.2e-64, Sum P(2) = 3.2e-64
Identities = 86/218 (39%), Positives = 128/218 (58%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I ++R +LP+ ++ I V+S Q V+I GETG GK+TQ+PQ+LLE W+ E I
Sbjct: 37 IEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWA-AEGKVIGV 95
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLVSQG 299
TQPRR++ATSVA R++ ERG +G +GY IR + H++ I F T+G+L+R ++S
Sbjct: 96 TQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDP 155
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+ LK+ S +I+DE HER Y+D + +++ +L LRLI+ SATL
Sbjct: 156 L--LKKYSV------------LILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATL 201
Query: 360 DADRFSQYFG----G------CPVIQVPGFTYPVKSFY 387
DA +F +F G C ++ V G T+PV FY
Sbjct: 202 DAKKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFY 239
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 415 (151.1 bits), Expect = 6.6e-64, Sum P(2) = 6.6e-64
Identities = 115/356 (32%), Positives = 192/356 (53%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I +E ++ KI DG IL FL G E++ L+ A R
Sbjct: 249 YLQSPVPDYIKST-VETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 306
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K +
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L VS+ASA QRAGRAGR ++G CY LY++ LP VPE++R
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSN 426
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKL 768
+ + LQ+K L + N+ F + PP + ++ A+ +L +G L D ++TE LG ++
Sbjct: 427 LAPVILQLKALGID-NVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRI 483
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
++P+ +KML + C L++A ++ F +P N+K +A + A
Sbjct: 484 AEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP--SNQKSQAIRVHRKFAVE 541
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G D L ++ +E + + Q W C ++F++ + +R+QL+ L+K
Sbjct: 542 EG---DHLTMLNVYEAFIKHNKNSQ--W-CQEHFLNYKGLVRAATVREQLKKLLVK 591
Score = 320 (117.7 bits), Expect = 6.6e-64, Sum P(2) = 6.6e-64
Identities = 86/254 (33%), Positives = 136/254 (53%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S+ ++ S T+ + I ++R KLP+ ++ I +++ Q V+I GETGC
Sbjct: 22 ISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGC 81
Query: 216 GKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLES 275
GK+TQ+PQ+L E W+ E + TQPRR++A +VA R++ ERG +G +GY IR +
Sbjct: 82 GKSTQIPQYLAEAGWT-AEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDD 140
Query: 276 KGGKHSS-IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
++ I F T+G+L+R E P SA I++DE HER Y+D
Sbjct: 141 CTDPLATRIKFLTDGMLVR-----------EMMVDPLLTKYSA---IMLDEAHERTLYTD 186
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG----------CPVIQVPGFTYPVK 384
+ +++ + LRLI+ SATLDA++F +F C ++ V G T+PV
Sbjct: 187 IAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTSDPPRDTCVILTVEGRTFPVD 246
Query: 385 SFYLED-VLSILKS 397
FYL+ V +KS
Sbjct: 247 IFYLQSPVPDYIKS 260
Score = 39 (18.8 bits), Expect = 9.7e-24, Sum P(2) = 9.7e-24
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 372 PVIQ--VPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDP------ELTEENKS 423
PV++ V GF F+ V ++ H+ AS++ + P E+ + +K
Sbjct: 605 PVLRCIVSGFFANAARFHSTGVYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKY 664
Query: 424 TLDE--AISLAW 433
+ + AI AW
Sbjct: 665 YMRDVTAIESAW 676
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 379 (138.5 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 83/241 (34%), Positives = 147/241 (60%)
Query: 172 IEKDANLRQI-VEE-RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
+E +A +++ +EE R LP+ +F+D V +QV++I GETG GKTTQ+PQ+L E
Sbjct: 346 VETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAG 405
Query: 230 WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNG 289
+ +G +I CTQPRR++A SVA R++ E G +G +GY IR E + + + + T+G
Sbjct: 406 FCEGGK-RIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDG 464
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
+LLR E N+P D+++ + +++DE HER ++D + +++D+
Sbjct: 465 MLLR-----------EFLNEP---DLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKD 510
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
L+L++ SATLDA++FS +F P+ ++PG +PV +Y + + E++++D+A +
Sbjct: 511 LKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQ-------APEADYVDAAIVT 563
Query: 410 V 410
+
Sbjct: 564 I 564
Score = 363 (132.8 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 100/322 (31%), Positives = 161/322 (50%)
Query: 562 GAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
G ILVFL G E+I ++ L+ + + + +P+++ +PS Q K+F+ P R
Sbjct: 575 GDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDAR 634
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K++L+TNIAET++TID + YVID G K+ S+D + V L +SKA+A QRAGRAGR
Sbjct: 635 KVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGR 694
Query: 680 CQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPP 737
G C+ LY+ L + +PEI+R + + L +K L I D + LDPP
Sbjct: 695 TGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSL----GIHDLVHFDFLDPP 750
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
T+ A+ L +GAL+ ++T+LG ++ P MSKM+ + +C + +T+A
Sbjct: 751 PQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIA 810
Query: 798 CA-SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW 856
S F P K + A + D + ++ + W+ + + W
Sbjct: 811 AMLSCNAAVFYRP-----KAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSF--SQRW 863
Query: 857 FCSQYFVSSGVMNMLLGMRKQL 878
C + +V M +R QL
Sbjct: 864 -CVENYVQHRTMKRARDVRDQL 884
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 379 (138.5 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 83/241 (34%), Positives = 147/241 (60%)
Query: 172 IEKDANLRQI-VEE-RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
+E +A +++ +EE R LP+ +F+D V +QV++I GETG GKTTQ+PQ+L E
Sbjct: 346 VETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAG 405
Query: 230 WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNG 289
+ +G +I CTQPRR++A SVA R++ E G +G +GY IR E + + + + T+G
Sbjct: 406 FCEGGK-RIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDG 464
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
+LLR E N+P D+++ + +++DE HER ++D + +++D+
Sbjct: 465 MLLR-----------EFLNEP---DLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKD 510
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
L+L++ SATLDA++FS +F P+ ++PG +PV +Y + + E++++D+A +
Sbjct: 511 LKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQ-------APEADYVDAAIVT 563
Query: 410 V 410
+
Sbjct: 564 I 564
Score = 363 (132.8 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 100/322 (31%), Positives = 161/322 (50%)
Query: 562 GAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
G ILVFL G E+I ++ L+ + + + +P+++ +PS Q K+F+ P R
Sbjct: 575 GDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDAR 634
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K++L+TNIAET++TID + YVID G K+ S+D + V L +SKA+A QRAGRAGR
Sbjct: 635 KVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGR 694
Query: 680 CQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPP 737
G C+ LY+ L + +PEI+R + + L +K L I D + LDPP
Sbjct: 695 TGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSL----GIHDLVHFDFLDPP 750
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
T+ A+ L +GAL+ ++T+LG ++ P MSKM+ + +C + +T+A
Sbjct: 751 PQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIA 810
Query: 798 CA-SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW 856
S F P K + A + D + ++ + W+ + + W
Sbjct: 811 AMLSCNAAVFYRP-----KAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSF--SQRW 863
Query: 857 FCSQYFVSSGVMNMLLGMRKQL 878
C + +V M +R QL
Sbjct: 864 -CVENYVQHRTMKRARDVRDQL 884
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 416 (151.5 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 115/357 (32%), Positives = 189/357 (52%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I ++ ++ KI DG IL FL G E++ L+ A R
Sbjct: 249 YLQSPVPDYIKAT-VDTVV-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G MK +
Sbjct: 307 KKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLR 366
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L VS+ASA QRAGR GR ++G CY LY++ LP VPE++R
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSN 426
Query: 710 IEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEK 767
+ + LQ+K L I+ L+ + PP + ++ A+ +L +G L D ++TE LG +
Sbjct: 427 LAPVVLQLKAL----GIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMR 482
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ ++P+ +KML + C L++A ++ F P N+K +AT + A
Sbjct: 483 IAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFP--SNQKSQATRVHRKFAV 540
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G D L ++ +E + K W C ++F++ + +R QL+ L+K
Sbjct: 541 EEG---DHLTMLNVYEAF--IKHNKSSQW-CQEHFLNYKGLVRAATVRDQLKKLLVK 591
Score = 313 (115.2 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 79/220 (35%), Positives = 126/220 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I ++R KLP+ ++ I V++ Q V+I GETGCGK+TQVPQ+L E W+ E +
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWT-AEGRVVGV 105
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLVSQG 299
TQPRR++A +VA R++ ERG +G +GY IR + ++ I F T+G+L+R ++
Sbjct: 106 TQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMM--- 162
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
V L ++ + +++DE HER Y+D + +++ + LRLI+ SATL
Sbjct: 163 VDPL-----------LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 360 DADRFSQYFGG----------CPVIQVPGFTYPVKSFYLE 389
DA++F +F C ++ V G T+PV FYL+
Sbjct: 212 DAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 416 (151.5 bits), Expect = 2.2e-63, Sum P(2) = 2.2e-63
Identities = 115/357 (32%), Positives = 189/357 (52%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I ++ ++ KI DG IL FL G E++ L+ A R
Sbjct: 249 YLQSPVPDYIKAT-VDTVV-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G MK +
Sbjct: 307 KKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLR 366
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L VS+ASA QRAGR GR ++G CY LY++ LP VPE++R
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSN 426
Query: 710 IEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEK 767
+ + LQ+K L I+ L+ + PP + ++ A+ +L +G L D ++TE LG +
Sbjct: 427 LAPVVLQLKAL----GIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMR 482
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ ++P+ +KML + C L++A ++ F P N+K +AT + A
Sbjct: 483 IAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFP--SNQKSQATRVHRKFAV 540
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G D L ++ +E + K W C ++F++ + +R QL+ L+K
Sbjct: 541 EEG---DHLTMLNVYEAF--IKHNKSSQW-CQEHFLNYKGLVRAATVRDQLKKLLVK 591
Score = 313 (115.2 bits), Expect = 2.2e-63, Sum P(2) = 2.2e-63
Identities = 79/220 (35%), Positives = 126/220 (57%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I ++R KLP+ ++ I V++ Q V+I GETGCGK+TQVPQ+L E W+ E +
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWT-AEGRVVGV 105
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLVSQG 299
TQPRR++A +VA R++ ERG +G +GY IR + ++ I F T+G+L+R ++
Sbjct: 106 TQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMM--- 162
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
V L ++ + +++DE HER Y+D + +++ + LRLI+ SATL
Sbjct: 163 VDPL-----------LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 360 DADRFSQYFGG----------CPVIQVPGFTYPVKSFYLE 389
DA++F +F C ++ V G T+PV FYL+
Sbjct: 212 DAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 381 (139.2 bits), Expect = 3.8e-63, Sum P(2) = 3.8e-63
Identities = 120/432 (27%), Positives = 210/432 (48%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFR---DTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVFL G ++I +T + +L + + ++ +++ +P Q+K+F+ P
Sbjct: 443 GDILVFLTGQDEI-ETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNT 501
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKI+L+TNIAET+ITID + YVID G +K+ Y+P + +L S+ASA QRAGRAG
Sbjct: 502 RKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAG 561
Query: 679 RCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDP 736
R G C+ L+++ + L Q PEI+R+ + + L + L I D L + +DP
Sbjct: 562 RVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSL----GINDLLGFEFMDP 617
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P I A+ +L +GAL+ K+T+ G+K+ + P+ +K + + D +++
Sbjct: 618 PSKEAIIKALNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISI 677
Query: 797 -ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A ++ + F P ++K+ A K E L G DQ ++ ++ W ++ G
Sbjct: 678 IAMLNESSNLFYRP--KDKKELADKRKQEFNDLQG---DQFMLLKIWQQWVDS---GYSV 729
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-IPEDVSSCSH---NARVPGIIHAVLMA 911
+C YF+ M + + +QL K G + H N ++ L++
Sbjct: 730 QWCQDYFIQYKTMKRIKNIYEQLIRLSKKIGIEVNSRHQHRDHLQENTDNNTLLTKCLIS 789
Query: 912 GLYPMVARLRPPHKNGRRFVETAGGAKVR--LHPHSLNFKLSFKKTDDCPLMVYDEITRG 969
G + + +L P ++ GG +HP S +KL K L+ Y+ +
Sbjct: 790 GFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPSSCIYKLKPKPKY---LLYYELVLTS 846
Query: 970 DGGMHVRNCTVV 981
++RNC ++
Sbjct: 847 KE--YMRNCIIL 856
Score = 354 (129.7 bits), Expect = 3.8e-63, Sum P(2) = 3.8e-63
Identities = 75/207 (36%), Positives = 125/207 (60%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQ 242
E R LP+ S+++ ++ NQ +++ GETG GKTTQ+PQ+L E +S+ I CTQ
Sbjct: 224 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQV-IACTQ 282
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRR++ATSVA R++ E +G+ +GY IR + C +GV + V+ G+
Sbjct: 283 PRRVAATSVANRVANEMQVKLGEQVGYNIRFDDN---------CKDGVTVIKYVTDGML- 332
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY--PHLRLILMSATLD 360
L+E P SA I++DE HER ++ +L++++D++ + L++I+ SAT++
Sbjct: 333 LREFLQDPTLGKYSA---IMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATIN 389
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFY 387
A++FSQ+F P++ +PG +PVK Y
Sbjct: 390 AEKFSQFFNNAPILNIPGRRFPVKIHY 416
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 388 (141.6 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 114/399 (28%), Positives = 190/399 (47%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFF---------RDTSKFVIIPLHSMVPSVQQKKVFK 612
G ILVFL G +I K D L R +I+ L+ +P+ QQ+++F+
Sbjct: 238 GDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQIFQ 297
Query: 613 RPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQ 672
P G RK +++TNIA T++TID + Y++DSG +K+ +++ + L+ +SK+ A+Q
Sbjct: 298 PAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSEAQQ 357
Query: 673 RAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ 731
RAGRAGR AG C+ +YS+ +P++ +PEI+R + + L +K L + D ++
Sbjct: 358 RAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCL----GVHDVIR 413
Query: 732 -KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
LD P I A+ L A+ +VT+LG + + P +++ L A + C
Sbjct: 414 FPYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKAAALGCE 473
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
D L +A + F P P ++K A E+A+ GG +D L ++ FE K
Sbjct: 474 DIMLPVAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSNDFLMLLCVFE--KCRAS 531
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLM 910
AW C + ++ + + QL+ E++ +D ++ L
Sbjct: 532 ENPSAW-CKENWIHWRAVKSAFSVETQLR-EILLRLKQQKDFPHERFEGSRSELLRQCLC 589
Query: 911 AGLYPMVARLRPPHKNGRRFVETAG-GAKVRLHPHSLNF 948
G + VAR G+ F G G+ V +HP S F
Sbjct: 590 LGYFTNVAR----RSIGKSFCTMDGHGSSVLIHPSSCLF 624
Score = 337 (123.7 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 74/209 (35%), Positives = 123/209 (58%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQP 243
E KLPI +KD + V+ N ++++GETG GKTTQ+PQ+L + S+ +I TQP
Sbjct: 14 ESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNG--RIGVTQP 71
Query: 244 RRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRL 303
RR++A +VA+R+S E +G+ +GY++R + K + I + T+G LLR +++
Sbjct: 72 RRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILAD----- 126
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML-----PSYPHLRLILMSAT 358
P+ S +I+DE HER +D +L +++ L + L++++MSAT
Sbjct: 127 ------PSLTQYSI---VILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSAT 177
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
L+ ++ S ++G CPV +PG TYPVK +
Sbjct: 178 LETEKLSSFYGNCPVFTIPGRTYPVKETF 206
Score = 48 (22.0 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGS 450
DP LT+ + LDEA + + D LL+ L+GS
Sbjct: 126 DPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGS 162
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 411 (149.7 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 133/413 (32%), Positives = 203/413 (49%)
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDINK-TRD-RLLANPFFRDTSKFVIIPLHSMV 602
LV + Q+ ++ S+D ILVFL G E+I T+ R +A + ++PL++ +
Sbjct: 225 LVSVFQIHQE-APSSQD--ILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASL 281
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P QQ +VF+ P GCRK+ILSTNIAET+ITI + YV+D+G +K K Y+P + L
Sbjct: 282 PYSQQLRVFQAAPKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAV 341
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIK---RIPIEELCLQVKL 719
VSKA A QR GRAGR +GICY LY++ VPEI+ R + + LQ+
Sbjct: 342 QRVSKAQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLA 401
Query: 720 LD-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK---VTELGEKLGCLSVHP 775
L PN DF+ K P I+ AI L +GA+ E +T LG K+ + P
Sbjct: 402 LRIPNILTFDFMSK----PSPDAIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEP 457
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
SK + + C + LT+ P + ++ ++ KF ++S + D
Sbjct: 458 KFSKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKF-ISS----EGDH 512
Query: 836 LAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC 895
L ++ + +KN G + W C + FV+ M ++ +R QL+ +K +P + SS
Sbjct: 513 LTLLNVYRAFKNVS--GNKEW-CKENFVNGRNMMLVSDVRAQLRDICVKLS-MPME-SSR 567
Query: 896 SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
S A I L L+ A L+P +G + V +HP S+ F
Sbjct: 568 SDTAN----IRRCLAHSLFMNAAELQP---DGT-YSTVNSHQLVAIHPSSVLF 612
Score = 306 (112.8 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 81/233 (34%), Positives = 125/233 (53%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQP 243
+R +LPI + + S + + ++ GETG GKTTQ+PQ+L E G I TQP
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEA--GIGRQGIIAVTQP 77
Query: 244 RRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRL 303
RR++A S+A R+S E+ +G +GY +R + + I F T+G+LLR
Sbjct: 78 RRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLR---------- 127
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII------RDMLPSYPHLRLILMSA 357
EA P S +I+DE HER ++D + ++ R L P L++I+MSA
Sbjct: 128 -EAIGDPILRKYSV---VILDEAHERTIHTDVLFGVVKAAQKKRKELGKLP-LKVIVMSA 182
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
T+D D+FSQYF G PV+ + G +P++ FY K +S++L +A + V
Sbjct: 183 TMDVDQFSQYFNGAPVLYLEGRQHPIQVFYT-------KQPQSDYLQAALVSV 228
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 402 (146.6 bits), Expect = 2.8e-62, Sum P(2) = 2.8e-62
Identities = 115/358 (32%), Positives = 191/358 (53%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
Y+ + P+ I +E + KI DG IL FL G E++ L+ A R
Sbjct: 249 YIQSPVPDYIKST-VETAM-KIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGM 306
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
+ ++P+++ +PS Q KVF+R RK+I++TN+AET+ITI + YVID G +K +
Sbjct: 307 RKHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLR 366
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA--ASLPDFQVPEIKR 707
+Y+P + L VSKASA QRAGRAGR ++G CY LY+ LP VPE++R
Sbjct: 367 AYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQR 426
Query: 708 IPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGE 766
+ + LQ+K L + N+ F L PP + ++ A+ +L +G L + ++TE LG
Sbjct: 427 SNLAPVILQLKALGID-NVLRF--PFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGM 483
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
++ ++P+ +KML + C LT+A ++ F +P PN+K +A + A
Sbjct: 484 RIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFLIP--PNQKSQAARQHRKFA 541
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVS-SGVMNMLLGMRKQLQTELI 883
G D L ++ +E + + Q W C ++F++ G++ + +R+QL+ L+
Sbjct: 542 VEEG---DHLTMLNVYEAFVKHSKSSQ--W-CQEHFLNYKGLVRASV-VREQLKKLLV 592
Score = 318 (117.0 bits), Expect = 2.8e-62, Sum P(2) = 2.8e-62
Identities = 83/229 (36%), Positives = 129/229 (56%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I ++R KLP+ ++ I V+S Q ++I GETGCGK+TQ+PQ+L E W+ E +
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWT-AEGRVVGV 105
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLVSQG 299
TQPRR++A SVA R++ ERG +G +GY IR + ++ I F T+G+L+R +++
Sbjct: 106 TQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMAD- 164
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P S L ++DE HER Y+D + +++ + LRLI+ SATL
Sbjct: 165 ----------PLLTRYSVL---MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 360 DADRFSQYFG----GCP------VIQVPGFTYPVKSFYLED-VLSILKS 397
DA++F +F G P ++ V G T+PV FY++ V +KS
Sbjct: 212 DAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKS 260
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 421 (153.3 bits), Expect = 4.1e-62, Sum P(2) = 4.1e-62
Identities = 133/405 (32%), Positives = 200/405 (49%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLL--ANPF-FR----DTS--KFVIIPLHSMVPSV 605
I ++ +G ILVFL G +I K D L A +R D S +I+PL+ + +
Sbjct: 215 IHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTD 274
Query: 606 QQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 665
QQK++F P G RK ++STNIA T++TI+ V YV+DSG +K+ +++P + L+ +
Sbjct: 275 QQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPI 334
Query: 666 SKASAKQRAGRAGRCQAGICYHLYS-QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
SK+ A QRAGRAGR +G Y LYS + +PD VPEIKR + + L +K L
Sbjct: 335 SKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCL---- 390
Query: 725 NIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEK--VTELGEKLGCLSVHPLMSKML 781
++ D ++ LD P I A+ L A+ + VT LGE L + P +S +
Sbjct: 391 SVHDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSCAV 450
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A +DC D L +A + F P P ++K A EL+S GG +D ++
Sbjct: 451 IKAASLDCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLLNI 510
Query: 842 FECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARV 901
FE K +K AW C +Y++ + L + KQL+ K +P+ +R
Sbjct: 511 FEQCKASKS--PSAW-CHKYWIHWRAVKSALSVEKQLREITSKLKQLPDFPKETFEGSRT 567
Query: 902 PGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG-GAKVRLHPHS 945
++ L AG + VAR R F G G+ V +HP S
Sbjct: 568 E-LLRRCLCAGYFINVAR----RSAARTFCTMDGHGSIVYIHPSS 607
Score = 297 (109.6 bits), Expect = 4.1e-62, Sum P(2) = 4.1e-62
Identities = 72/238 (30%), Positives = 133/238 (55%)
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPI + + V ++++GETG GK+TQ+P++L E + I TQPRR++
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEA--GLAQHGAIGVTQPRRVA 58
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
SVA+R++ E G +G +GY++R + + ++I + T+G LLR +++ +
Sbjct: 59 TISVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPL------- 111
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM-LPSYP-----HLRLILMSATLDA 361
+S + II+DE HER +D + +++ + L + P +++++MSATL+
Sbjct: 112 -------LSKYSIIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEV 164
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSA---SLIVPNEDPE 416
D+ S++FG C V+ +PG +YPVK + ++LS + S ++ A +L + +PE
Sbjct: 165 DKLSEFFGHCSVLHIPGRSYPVKEIFC-NLLSPRDTGSSAYVTEAVKVTLDIHLNEPE 221
Score = 49 (22.3 bits), Expect = 4.9e-36, Sum P(2) = 4.9e-36
Identities = 24/100 (24%), Positives = 44/100 (44%)
Query: 32 ISQILDGFLASKDEVYTFD-ANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKK 90
+ IL L SK + D A+ + ++ + KK+ + +K GR + +V V +
Sbjct: 103 LRHILADPLLSKYSIIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSAT- 161
Query: 91 RVETDKGKEILP--SLTFSEGSKLVLQDLFTHY--PPDDG 126
+E DK E S+ G ++++F + P D G
Sbjct: 162 -LEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTG 200
Score = 42 (19.8 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSP 451
DP L++ + LDEA + S D LL+ + L+ P
Sbjct: 109 DPLLSKYSIIILDEAHERSLSTDILFGLLKKLFLQNKP 146
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 378 (138.1 bits), Expect = 6.8e-62, Sum P(2) = 6.8e-62
Identities = 121/380 (31%), Positives = 187/380 (49%)
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
K+ G IL FL G E++ + D L + ++P++ + S Q VF
Sbjct: 254 KLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMYGSMSSTDQLSVFFT 313
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PP G RK++L+TNIAET+ITI +VYVID G +K K Y+P +L VSKASA QR
Sbjct: 314 PPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQR 373
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
AGRAGR + G Y LY++ +L Q PE++R + LQ+K L I + L+
Sbjct: 374 AGRAGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKAL----GIGNILR-- 427
Query: 734 LDPPVSVTIRNAIIVLQDIGAL-SLDEK--VTE-LGEKLGCLSVHPLMSKMLFFAILMDC 789
D P +N + L+ + AL ++DE+ +T+ +G L L ++SKML+ + M C
Sbjct: 428 FDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGC 487
Query: 790 LDPALTLACASDYRDPFTLPISP--NEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
+ +T+ + F+ P S + R KFE+A + D + ++ A+ +
Sbjct: 488 SEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVA-----EGDFITMLNAYTGFV- 541
Query: 848 AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHA 907
+ G FC QYF+ + +R+QL T K IP + SC + +
Sbjct: 542 --EEGMTKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIP--IFSCKGDVEK---LCK 594
Query: 908 VLMAGLYPMVARLRPPHKNG 927
+ AG + VA L H +G
Sbjct: 595 CITAGFFTQVAYL---HHSG 611
Score = 339 (124.4 bits), Expect = 6.8e-62, Sum P(2) = 6.8e-62
Identities = 81/217 (37%), Positives = 126/217 (58%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW-SKGETCKIV 239
++E+R +LPI ++D I ++ +QVV++ GETG GK+TQVPQ+L E W +KG I
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKG---LIG 96
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
T+PRR+S ++A R++ ERGE +GD +GY +R + I F T G+LLR +++
Sbjct: 97 ITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLAD- 155
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P IIVDE HER+ +D +L +++ +L L+LI+ SAT+
Sbjct: 156 ----------PLLTQYGV---IIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATI 202
Query: 360 DADRFSQYF-----GGCPV-IQVPGFTYPVKSFYLED 390
DA FS++F G V + + G +PV +FYL +
Sbjct: 203 DASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNE 239
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 416 (151.5 bits), Expect = 9.3e-62, Sum P(3) = 9.3e-62
Identities = 146/475 (30%), Positives = 230/475 (48%)
Query: 535 LATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKT----RDRLLANPFFR 588
L TV+PE +D L+ + +I + + G ILVFL G ++I ++RL P
Sbjct: 265 LYTVHPESDYVDATLVT--IFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIP--E 320
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
D K + + + S +PS QQ KVF P G RK+IL+TNIAET+ITI + YVID G +K
Sbjct: 321 DKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKA 380
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRI 708
+SYDP + +L SKA QR+GRAGR G + LY + L D PEIKR
Sbjct: 381 RSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRC 440
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGE 766
+ + LQ+K L I+D + +D P I A+ L +GAL+ D K+ +G
Sbjct: 441 NLSNIILQLKAL----GIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGY 496
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR-ATAAKFEL 825
++ L + P+ SK L A +CL+ L F P EK+ A +K
Sbjct: 497 QMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIF---YDPREKREEARTSKNHF 553
Query: 826 ASLYGGQSDQLAVIA-AFECWKNAKQRGQ--------EAWFCSQYFVSSGVMNMLLGMRK 876
AS+ G L+V + E + K G + W C + +V+S + + +
Sbjct: 554 ASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKW-CKENYVNSRSLKHARDIYR 612
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGR-RFVETAG 935
Q++ + + GF +VSSC ++ L A + A+ + +G R +E+
Sbjct: 613 QIREHVEQIGF---NVSSCGNDMLA---FRRCLAASFFLKAAQRQ---LDGTYRALES-- 661
Query: 936 GAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
G V +HP S+ F+ +C ++++E+ + +++N T++ L L LA
Sbjct: 662 GEVVHIHPTSVLFRAK----PEC--VIFNELMQ-TSKKYIKNLTIIDSLWLSELA 709
Score = 242 (90.2 bits), Expect = 9.3e-62, Sum P(3) = 9.3e-62
Identities = 66/193 (34%), Positives = 105/193 (54%)
Query: 154 PKMSKAEIAMKVESLTSRIEKDA----NLRQ-IVEERSKLPISSFKDVITSTVDSNQVVL 208
P M++ E+ V++ + ++RQ I E R LPI+S + + V N +++
Sbjct: 2 PSMAQGELKSFVQNSRPNPKSPTVSPFSMRQKIAEHRRSLPIASVEKRLVEEVQKNDILI 61
Query: 209 ISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIG 268
I GETG GKTTQ+PQFL + + E I TQPRRI+A +VA+R++ E +G +G
Sbjct: 62 IVGETGSGKTTQLPQFLYNAGFCR-EGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVG 120
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y IR + + + + T+G+LLR EA P +S + IIVDE H+
Sbjct: 121 YSIRFDDTTSGSTRLKYMTDGLLLR-----------EALLDP---HLSRYSVIIVDEAHD 166
Query: 329 RDRYSDFMLAIIR 341
R ++D +LA+++
Sbjct: 167 RSVHTDVLLALLK 179
Score = 101 (40.6 bits), Expect = 9.3e-62, Sum P(3) = 9.3e-62
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
L+LI+MSA+LDA FS+YFGG + V G +PV Y
Sbjct: 229 LKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILY 266
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 392 (143.0 bits), Expect = 1.2e-61, Sum P(3) = 1.2e-61
Identities = 132/444 (29%), Positives = 208/444 (46%)
Query: 537 TVNP--ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL-------LANPF- 586
T NP + ++ + + + + D G IL+F+ G EDI T D L + F
Sbjct: 537 TSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFG 596
Query: 587 ---FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDS 643
F + + I+P++S +P+ Q K+F+ RKII++TNIAET++TI + YVID
Sbjct: 597 TANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDC 656
Query: 644 GRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-V 702
G K K Y+P + +L + +SKA+A QR+GRAGR G Y LY++ Q +
Sbjct: 657 GYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTI 716
Query: 703 PEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
PEI+R + L +K LD + F +D P T +++ L IGA+ ++T
Sbjct: 717 PEIQRTNLSNTLLLLKSLDVTDELSKF--PFIDKPPLQTFLSSLYELWFIGAIDTSGQLT 774
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
LG ++ + P +SK+L A+ C D LT+ F P K+R A
Sbjct: 775 PLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRP-----KERQKEAD 829
Query: 823 FELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTEL 882
+ +SD L ++ FE W+ W C+++FV + +R QL T +
Sbjct: 830 IARNKFFIAKSDHLTLLNVFEQWR--ANNFSSHW-CNKHFVQYKSLVRARDIRDQLLT-I 885
Query: 883 IKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLH 942
+K+ IP +SS + II + +G A++ R +V G V+LH
Sbjct: 886 LKSQKIPV-ISS----GKDWDIIKKCICSGFAHQAAKIT----GLRNYVHLKTGVSVQLH 936
Query: 943 PHSLNFKLSFKKTDDCPLMVYDEI 966
P S L D P +VY E+
Sbjct: 937 PTSALHGLG----DLPPYVVYHEL 956
Score = 330 (121.2 bits), Expect = 1.2e-61, Sum P(3) = 1.2e-61
Identities = 78/222 (35%), Positives = 125/222 (56%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I + +LP+ + + S + NQVV+I GETG GKTTQ+ Q+L E ++ IV
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLES-KGGKHSSIVFCTNGVLLRLLVSQG 299
TQPRR++A SVA+R+++E +G +GY IR E + + + F T+G+LLR
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLR------ 456
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
L + D + + +I+DE HER +D +L + +L L+LI+ SAT+
Sbjct: 457 -ETLLD-------DTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATM 508
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLED-VLSILKSAES 400
+A +FS +FG P +PG T+PV++ Y + V +++A S
Sbjct: 509 NAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVS 550
Score = 52 (23.4 bits), Expect = 1.2e-61, Sum P(3) = 1.2e-61
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 65 CKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPD 124
CK + S ++ + + K+K ++ K+I PS+ + K+ L DL D
Sbjct: 48 CKALTKLSSNNPIIFNELLELLKNKSEEDSTGPKKIAPSINKRKKFKIQL-DL------D 100
Query: 125 DGEPGEKLDANQSRKSDKTRG--KRVD 149
D E ++LD+ +K TR KR+D
Sbjct: 101 DNE--DELDSPVQKKPAPTRTLFKRID 125
Score = 40 (19.1 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 499 LQLGEQENQPEVAQIIKKHMENALSDSM 526
LQ+ + QP +++I+ + N SD M
Sbjct: 778 LQMAKFPLQPSLSKILLIAVRNGCSDEM 805
Score = 38 (18.4 bits), Expect = 3.4e-31, Sum P(3) = 3.4e-31
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF-----MLAIIRD 342
N + +L + ++ K+ SN+ DD + T D H +++ F +L++IR+
Sbjct: 306 NTAMGEVLGLENNNKAKDKSNQKICDDTALFTPSKDDIKHTKEQLPVFRCRSQLLSLIRE 365
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 381 (139.2 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 126/428 (29%), Positives = 206/428 (48%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKT--RDRLLANPFFRDTS 591
Y A + I+ + +L+ ++E G IL+FL G E+I + RL + RD
Sbjct: 292 YTAEAERDYIE-ASVRTVLQIHATEAE-GDILLFLTGEEEIEDVCRKVRLEVDELIRDAD 349
Query: 592 --KFVIIPLHSMVPSVQQKKVFKRPPPGC-------RKIILSTNIAETAITIDDVVYVID 642
+ PL+ +P QQ+K+F PP RK I++TNIAET++TID +VYV+D
Sbjct: 350 CGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVD 409
Query: 643 SGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQ 701
G K+K Y+ V +L + +S+ASA+QRAGRAGR + G C+ LY++ L +
Sbjct: 410 PGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQT 469
Query: 702 VPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEK 760
PEI R + L++K L ++D + +DPP T+ A+ L + L+ D
Sbjct: 470 YPEILRSNLSNTILELKKL----GVDDLVHFDFMDPPAPETMMRALEELNYLSCLNDDGD 525
Query: 761 VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATA 820
+T+LG + P ++ ML + C + L++ F P N +KRA
Sbjct: 526 LTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVTSLLSVPQVFMRPA--NNRKRADE 583
Query: 821 AKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQL 878
K + G D L ++ A+ +K+ +G + W C ++F+S ++ +R QL
Sbjct: 584 MKEHFKHMEG---DHLTLLNAYHAFKSEMAKGTDMKKW-CHEHFLSYRHLSSADNVRAQL 639
Query: 879 QTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAK 938
+ + + E VS+ + I L+AG + VA LR +G+ +
Sbjct: 640 KGIMERQDL--ELVSTPFTDKNYYTNIRRCLVAGFFMQVA-LR--ETSGKVYHTIKDNQN 694
Query: 939 VRLHPHSL 946
V LHP S+
Sbjct: 695 VMLHPSSV 702
Score = 336 (123.3 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 73/208 (35%), Positives = 119/208 (57%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIV 239
+I++ R LP+ + Q+++ GETG GKTTQ+PQ++L +
Sbjct: 99 KILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVA 158
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E +G +GY IR E+K + + + T+G LLR
Sbjct: 159 CTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLR------ 212
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
E + P +++ + II+DE HER +D ++A+++ + L++I+MSATL
Sbjct: 213 -----ETIHDP---NMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATL 264
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DA +F +YF P++ VPG T+PV+ FY
Sbjct: 265 DAAKFQRYFFEAPILAVPGRTHPVEIFY 292
Score = 42 (19.8 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 25/104 (24%), Positives = 40/104 (38%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSP-NVYNYQHTLTGLT------PL 466
DP +T + +DEA + D LL+ +SL S + TL
Sbjct: 217 DPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEA 276
Query: 467 MVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEV 510
+LA GR V + + A+ RT LQ+ E + ++
Sbjct: 277 PILAVPGRTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDI 320
Score = 42 (19.8 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 1066 QIYCLRERLSVAILFKVTHPQKALPP 1091
+ YC E LSV L V PQ + P
Sbjct: 551 EFYCSNEMLSVTSLLSV--PQVFMRP 574
Score = 40 (19.1 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 466 LMVLAGKGRVGDVCMLLSLGADCQLKAKD 494
L+ L G+ + DVC + L D ++ D
Sbjct: 321 LLFLTGEEEIEDVCRKVRLEVDELIRDAD 349
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 371 (135.7 bits), Expect = 2.1e-61, Sum P(4) = 2.1e-61
Identities = 80/226 (35%), Positives = 137/226 (60%)
Query: 164 KVESLTSRIEK--DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQV 221
++E L I+K + +++I++ER +LPI S++ I + +N+++++ GETG GK+TQ+
Sbjct: 412 ELEKLFEDIKKRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQL 471
Query: 222 PQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS 281
Q+L E + I+CTQPRRI+ ++A R++ E IG +GY IR ++K + +
Sbjct: 472 TQYLYECKYHMYGN--IICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEAT 529
Query: 282 SIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR 341
I++ T+G+ LRLL+ P +D+S L I+DE HER ++D +L I++
Sbjct: 530 KIMYMTDGMFLRLLLYN-----------PTLEDISVL---IIDEAHERALHTDVILPIVK 575
Query: 342 DMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
D+ ++R+++ SATLDA++ S YF P+ VPG Y V +Y
Sbjct: 576 DICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYY 621
Score = 330 (121.2 bits), Expect = 2.1e-61, Sum P(4) = 2.1e-61
Identities = 100/352 (28%), Positives = 176/352 (50%)
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKIILSTNI ET+ITID++VYVIDSG K+K Y+P + + +L + SKAS QR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 679 RCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE-DFLQKTLDPP 737
R + G C+ L+++ L D +PEI+R I + L +K L + I DFL DPP
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFL----DPP 918
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAI-LMDCLDPALTL 796
+ I + +L +GAL+ + +T G K+ SKM+ A +C+D L +
Sbjct: 919 SPIVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNV 978
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW 856
A + + + ++K A K ++ + GG D L + +K ++
Sbjct: 979 ASMLTHANNIFY-VQKGKEKEAENIK-KMFIIEGG-GDFLLFL---NIYKQCEENNFSTS 1032
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPM 916
FC +F+ + + ++ QL + + + IP ++ + I +++ A +
Sbjct: 1033 FCYDHFLQYHTLIKVKDVKTQLLS-ICEKIDIPITTCGIENHESINNIKKSIVSA-FFTN 1090
Query: 917 VARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITR 968
A P +K + ++ V ++P+S+ FK + + ++ +++ E+ +
Sbjct: 1091 AAL--PVNKTELKIIKL--NQVVSIYPNSVLFKKNIMEENENVCIIFYEVIK 1138
Score = 76 (31.8 bits), Expect = 2.1e-61, Sum P(4) = 2.1e-61
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 531 LDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL--LANPFFR 588
+D Y T+N E + I + +I + G ILVFLPG +I + L N
Sbjct: 617 VDIYY-TINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAP 675
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFK 612
VI+P++S +P Q ++F+
Sbjct: 676 KYRNLVILPIYSSLPVEYQARIFE 699
Score = 45 (20.9 bits), Expect = 2.1e-61, Sum P(4) = 2.1e-61
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 130 EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
E D ++S+K KT G+ DI + K K ++ +E R +K N + +E K
Sbjct: 13 EFTDNDESKKKIKTDGEENDIM-ESK-GKDSYSLYLEYQKGRNKKLKNNEEYIEYLKK 68
Score = 45 (20.9 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 18/80 (22%), Positives = 36/80 (45%)
Query: 124 DDGEPGEKLDANQSR-KSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIV 182
++GE EK D N+ K+DK + K K + + S+ + N+ + +
Sbjct: 731 ENGE-NEKNDKNEKNDKNDKNYKNEKNEKNNDKNDKNNVGNNSKMNVSQSKNKRNINEEI 789
Query: 183 EERSKLPISSF--KDVITST 200
EE ++ ++ + +I ST
Sbjct: 790 EELKRINTNNKIRRKIILST 809
Score = 41 (19.5 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 21/82 (25%), Positives = 33/82 (40%)
Query: 124 DDGEPGEKLDANQSRKSDKTR-GKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ-I 181
D EK + N K+DK G + +K I ++E L RI + +R+ I
Sbjct: 748 DKNYKNEKNEKNND-KNDKNNVGNNSKMNVSQSKNKRNINEEIEEL-KRINTNNKIRRKI 805
Query: 182 VEERSKLPISSFKDVITSTVDS 203
+ + S D I +DS
Sbjct: 806 ILSTNICETSITIDNIVYVIDS 827
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 371 (135.7 bits), Expect = 2.1e-61, Sum P(4) = 2.1e-61
Identities = 80/226 (35%), Positives = 137/226 (60%)
Query: 164 KVESLTSRIEK--DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQV 221
++E L I+K + +++I++ER +LPI S++ I + +N+++++ GETG GK+TQ+
Sbjct: 412 ELEKLFEDIKKRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQL 471
Query: 222 PQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS 281
Q+L E + I+CTQPRRI+ ++A R++ E IG +GY IR ++K + +
Sbjct: 472 TQYLYECKYHMYGN--IICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEAT 529
Query: 282 SIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR 341
I++ T+G+ LRLL+ P +D+S L I+DE HER ++D +L I++
Sbjct: 530 KIMYMTDGMFLRLLLYN-----------PTLEDISVL---IIDEAHERALHTDVILPIVK 575
Query: 342 DMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
D+ ++R+++ SATLDA++ S YF P+ VPG Y V +Y
Sbjct: 576 DICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYY 621
Score = 330 (121.2 bits), Expect = 2.1e-61, Sum P(4) = 2.1e-61
Identities = 100/352 (28%), Positives = 176/352 (50%)
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKIILSTNI ET+ITID++VYVIDSG K+K Y+P + + +L + SKAS QR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 679 RCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE-DFLQKTLDPP 737
R + G C+ L+++ L D +PEI+R I + L +K L + I DFL DPP
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFL----DPP 918
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAI-LMDCLDPALTL 796
+ I + +L +GAL+ + +T G K+ SKM+ A +C+D L +
Sbjct: 919 SPIVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNV 978
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW 856
A + + + ++K A K ++ + GG D L + +K ++
Sbjct: 979 ASMLTHANNIFY-VQKGKEKEAENIK-KMFIIEGG-GDFLLFL---NIYKQCEENNFSTS 1032
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPM 916
FC +F+ + + ++ QL + + + IP ++ + I +++ A +
Sbjct: 1033 FCYDHFLQYHTLIKVKDVKTQLLS-ICEKIDIPITTCGIENHESINNIKKSIVSA-FFTN 1090
Query: 917 VARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITR 968
A P +K + ++ V ++P+S+ FK + + ++ +++ E+ +
Sbjct: 1091 AAL--PVNKTELKIIKL--NQVVSIYPNSVLFKKNIMEENENVCIIFYEVIK 1138
Score = 76 (31.8 bits), Expect = 2.1e-61, Sum P(4) = 2.1e-61
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 531 LDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL--LANPFFR 588
+D Y T+N E + I + +I + G ILVFLPG +I + L N
Sbjct: 617 VDIYY-TINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAP 675
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFK 612
VI+P++S +P Q ++F+
Sbjct: 676 KYRNLVILPIYSSLPVEYQARIFE 699
Score = 45 (20.9 bits), Expect = 2.1e-61, Sum P(4) = 2.1e-61
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 130 EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
E D ++S+K KT G+ DI + K K ++ +E R +K N + +E K
Sbjct: 13 EFTDNDESKKKIKTDGEENDIM-ESK-GKDSYSLYLEYQKGRNKKLKNNEEYIEYLKK 68
Score = 45 (20.9 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 18/80 (22%), Positives = 36/80 (45%)
Query: 124 DDGEPGEKLDANQSR-KSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIV 182
++GE EK D N+ K+DK + K K + + S+ + N+ + +
Sbjct: 731 ENGE-NEKNDKNEKNDKNDKNYKNEKNEKNNDKNDKNNVGNNSKMNVSQSKNKRNINEEI 789
Query: 183 EERSKLPISSF--KDVITST 200
EE ++ ++ + +I ST
Sbjct: 790 EELKRINTNNKIRRKIILST 809
Score = 41 (19.5 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 21/82 (25%), Positives = 33/82 (40%)
Query: 124 DDGEPGEKLDANQSRKSDKTR-GKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ-I 181
D EK + N K+DK G + +K I ++E L RI + +R+ I
Sbjct: 748 DKNYKNEKNEKNND-KNDKNNVGNNSKMNVSQSKNKRNINEEIEEL-KRINTNNKIRRKI 805
Query: 182 VEERSKLPISSFKDVITSTVDS 203
+ + S D I +DS
Sbjct: 806 ILSTNICETSITIDNIVYVIDS 827
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 419 (152.6 bits), Expect = 6.5e-61, Sum P(2) = 6.5e-61
Identities = 129/430 (30%), Positives = 209/430 (48%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMD---SE-DGAILVFLPGWEDINKTRDRL--LANP 585
+K+ + P + Q + K+ MD +E G ILVFL G +I K+ + L +A
Sbjct: 239 EKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAES 298
Query: 586 F-----FRDTSK--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
+DT+ +I+P + + + QQ+++F PPPG RK ++STNI+ T++TID +
Sbjct: 299 VDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIR 358
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS-QLRAASL 697
YV+D G +K+ +++P + L+ +SK+ A QR+GRAGR +G C+ +YS + + +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCM 418
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALS 756
PD +PEIKR + + L +K L I D ++ LDPP I A+ L A+
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLA----IHDVIRFPYLDPPNERLILEALKQLYQCDAID 474
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
VT LG + + P ++ + A +DC D L +A + F P+ P +K
Sbjct: 475 RSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK 534
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
A ELA+ GG +D + FE K G A +C ++++ + +
Sbjct: 535 EAEQRHRELAAKAGGFNDFATLAVIFE---QCKSSGAPASWCQKHWIHWRCLFSAFRVEA 591
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG- 935
QL+ ELI+ D + ++ L AG + VAR GR F G
Sbjct: 592 QLR-ELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVAR----RSVGRTFCTMDGR 646
Query: 936 GAKVRLHPHS 945
G+ V +HP S
Sbjct: 647 GSPVHIHPSS 656
Score = 290 (107.1 bits), Expect = 6.5e-61, Sum P(2) = 6.5e-61
Identities = 64/201 (31%), Positives = 115/201 (57%)
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISA 248
PI + + V N ++++G TG GKTTQ+P++L E +S+ + TQPR+++A
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGV--TQPRKVAA 111
Query: 249 TSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
SVA+R++ E +G +GY++R + K ++I + T+G LL+ ++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGD---------- 161
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR----DMLPSYP-HLRLILMSATLDADR 363
P ++S + II+DE HER +D + +++ D P+ HL++++MSAT++ +
Sbjct: 162 -P---NLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAK 217
Query: 364 FSQYFGGCPVIQVPGFTYPVK 384
S +FG CP+ +PG YPV+
Sbjct: 218 LSAFFGNCPIFDIPGRLYPVR 238
Score = 43 (20.2 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPN 452
DP L++ + LDEA + D LL+ + + SPN
Sbjct: 161 DPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPN 199
Score = 38 (18.4 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 382 PVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPE---LTEENKSTLDEAIS 430
P++ ++ D+L L ++ L S + ED +EN L + IS
Sbjct: 686 PIRYEWVRDLLPKLHELNAHDLSSVARREMREDARRKWTNKENVKQLKDGIS 737
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 379 (138.5 bits), Expect = 1.0e-60, Sum P(3) = 1.0e-60
Identities = 98/271 (36%), Positives = 155/271 (57%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + I+E+R LPI + + + + + N +V++ GETG GKTTQ+ Q+L E ++ +
Sbjct: 520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT--DY 577
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I CTQPRR++A SVA+R+S E G N+G+ +GY IR E + + I + T+G+LLR
Sbjct: 578 GMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLR-- 635
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+EA D SA II+DE HER +D + ++R+++ L+LI+
Sbjct: 636 -----ESLREAD----LDHYSA---IIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 683
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL----ED-VLSILKSAESNHLDSAS--- 407
SAT+DA++F+ +FG P+ +PG T+PV + ED V + +K + HL A
Sbjct: 684 SATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDI 743
Query: 408 -LIVPN-EDPELTE----ENKSTLDEAISLA 432
+ +P ED E+T E+ L+ A +LA
Sbjct: 744 LIFMPGQEDIEVTSDQIVEHLEELENAPALA 774
Score = 351 (128.6 bits), Expect = 1.0e-60, Sum P(3) = 1.0e-60
Identities = 99/340 (29%), Positives = 166/340 (48%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQ 606
++Q L+ + + G IL+F+PG EDI T D+++ + + ++P++S +PS
Sbjct: 728 VKQSLQ-VHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDL 786
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F++ P G RK I++TNIAET++T+D +++VIDSG K K P S L+ +
Sbjct: 787 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQ 846
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
K G +G C + C LY+Q + L VPEI+R + + L +K L
Sbjct: 847 KIQKNINTGCSG-CTSPRCCRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL----G 901
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
++D LQ +DPP + N++ L +GAL +T G + + P +SKML +
Sbjct: 902 VQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 961
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
M C L + F P E+ KF + +SD L+ + +
Sbjct: 962 CDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVP-----ESDHLSYLNVYLQ 1016
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
WKN W C+ +F+ + M + +R QL+ +++
Sbjct: 1017 WKNNNY--STIW-CNDHFIHAKAMRKVREVRAQLKDIMVQ 1053
Score = 39 (18.8 bits), Expect = 1.0e-60, Sum P(3) = 1.0e-60
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKD 195
++ L S K+ + E++ K ISS+KD
Sbjct: 51 LDLLASLKRKEREEKDDGEDKKKSRISSYKD 81
Score = 38 (18.4 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 540 PELIDLVLIEQLLRKICMDSEDG 562
P L+ L L+ L RK + +DG
Sbjct: 46 PSLLGLDLLASLKRKEREEKDDG 68
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 405 (147.6 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 111/329 (33%), Positives = 172/329 (52%)
Query: 564 ILVFLPGWEDI---NKT-RDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
ILVFL G E+I +KT RD +A +++PL++ +P QQ +VF+R P G R
Sbjct: 298 ILVFLTGQEEIEAMSKTCRD--IAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYR 355
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K+I+STNIAET+ITI + YV+D+G +K K Y+P + + L VSK A QR GRAGR
Sbjct: 356 KVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGR 415
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD-PNCNIEDFLQKTLDPPV 738
+GICY LY++ VPEI+R + + LQ+ + PN DF+ K P
Sbjct: 416 EDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSK----PS 471
Query: 739 SVTIRNAIIVLQDIGALSLDE---KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALT 795
I+ AI L+ +GAL + +T +G K+ + P +K + + C + LT
Sbjct: 472 PDHIQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILT 531
Query: 796 LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
+ P S ++ ++ KF ++S + D L ++ + +KN G +
Sbjct: 532 IVALLSVDSILYNPPSRRDEVQSVRKKF-VSS----EGDHLTLLNVYRTFKNTG--GNKE 584
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
W C + FV+S M ++ +R QL+ IK
Sbjct: 585 W-CKENFVNSKNMMLVAEVRAQLRDICIK 612
Score = 299 (110.3 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 73/213 (34%), Positives = 115/213 (53%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+ ++R LPI + + + + + ++ GETG GKTTQ+PQ+L E G I
Sbjct: 74 VEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEG--GIGRQAIIAV 131
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A S+A R+S E+ +G +GY +R + + I F T+G+LLR +S +
Sbjct: 132 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCL 191
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII------RDMLPSYPHLRLIL 354
R II+DE HER ++D + ++ R L P L++++
Sbjct: 192 LRKYSC--------------IILDEAHERTLHTDVLFGVVKAAQKRRKELGKLP-LKVLV 236
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
MSAT+D D FSQYF G PV+ + G +P++ FY
Sbjct: 237 MSATMDVDLFSQYFNGAPVLYLEGRQHPIQIFY 269
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 375 (137.1 bits), Expect = 1.9e-60, Sum P(2) = 1.9e-60
Identities = 119/393 (30%), Positives = 193/393 (49%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
G IL+FL G +I T + L + + ++PL+S + +Q+K+FK P G R+I
Sbjct: 291 GDILIFLSGEREIRDTAESLRKH----HPADCEVLPLYSRLTVSEQEKIFK--PHGRRRI 344
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
+L+TN+AET++T+ + VID+G + Y + + L +S+ASA QRAGR GR
Sbjct: 345 VLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVG 404
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVT 741
G+C LYS+ + P+F PEI R + + LQ+K L+ +I F ++PP
Sbjct: 405 PGVCIRLYSEQDFLNRPEFTDPEILRTNLAAVILQMKALNLG-DIRVF--PFVEPPDERL 461
Query: 742 IRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASD 801
+R+ + LQ+I AL ++TELG +L L V P + ++L +CL + A
Sbjct: 462 VRDGLRTLQEINALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALS 521
Query: 802 YRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR--GQEA-WFC 858
DP P +A AA + A SD +A++A + ++ +Q G + +C
Sbjct: 522 VPDPRERPAD-----KAQAADQKHARFRHPDSDFMAILALWNDYEEQRQHLSGSKLRQYC 576
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKN--GFIPEDVSSCSHNARVPGIIHAVLMAGLYPM 916
F+S+ M + +Q+ E++K G P V + G IH L+ GL
Sbjct: 577 RDNFLSALRMREWRDIHQQI-LEVVKGELGLRPNQVPADY------GEIHRALLTGLLCH 629
Query: 917 VARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
V R ++ +V G K ++ P S FK
Sbjct: 630 VG-FR---QDQNEYVGVRG-QKFQIFPGSFLFK 657
Score = 341 (125.1 bits), Expect = 1.9e-60, Sum P(2) = 1.9e-60
Identities = 86/234 (36%), Positives = 125/234 (53%)
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
P+ + IA ++ES + +E +LP+S + I + NQVV++ GET
Sbjct: 40 PEEALEAIARRIESSMALCSARMAAVPPLEYPEELPVSERRGEIAEAIRQNQVVIVCGET 99
Query: 214 GCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
G GKTTQ+P+ LE +G I TQPRRI+A SVA RI+ E +G+ +GYK+R
Sbjct: 100 GSGKTTQLPKICLEA--GRGIQGYIGHTQPRRIAARSVAARIADELKRPLGETVGYKVRF 157
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
+ S I T+G+LL E D L IVDE HER
Sbjct: 158 HDQTRPDSLIKLMTDGILLA-----------ETQTDRFLDQYDTL---IVDEAHERSLNI 203
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DF+L ++ +LP L+L++ SAT+D +RFS++F P+++VPG TYPV+ Y
Sbjct: 204 DFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPGRTYPVEIRY 257
Score = 43 (20.2 bits), Expect = 2.6e-24, Sum P(3) = 2.6e-24
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 814 EKKRATAAKFELASLYG 830
E+K A A FE +LYG
Sbjct: 705 ERKAARGAVFERTALYG 721
Score = 38 (18.4 bits), Expect = 2.6e-24, Sum P(3) = 2.6e-24
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 840 AAFECWKNAKQR 851
A+FE W+ A +R
Sbjct: 806 ASFEVWRKAAER 817
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 417 (151.9 bits), Expect = 2.2e-60, Sum P(2) = 2.2e-60
Identities = 129/430 (30%), Positives = 208/430 (48%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMD---SE-DGAILVFLPGWEDINKTRDRL--LANP 585
+K+ + P + Q + K+ MD +E G ILVFL G +I K+ + L +A
Sbjct: 239 EKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAES 298
Query: 586 F-----FRDTSK--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
+DT+ +I+P + + + QQ+++F PPPG RK ++STNI+ T++TID +
Sbjct: 299 VDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIR 358
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASL 697
YV+D G +K+ +++P + L+ +SK+ A QR+GRAGR +G C+ +YS+ +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 418
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALS 756
PD +PEIKR + + L +K L I D ++ LDPP I A+ L A+
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLA----IHDVIRFPYLDPPNERLILEALKQLYQCDAID 474
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
VT LG + + P ++ + A +DC D L +A + F P+ P +K
Sbjct: 475 RSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK 534
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
A ELA+ GG +D + FE K G A +C ++++ + +
Sbjct: 535 EAEQRHRELAAKAGGFNDFATLAVIFE---QCKSSGAPASWCQKHWIHWRCLFSAFRVEA 591
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG- 935
QL+ ELI+ D + ++ L AG + VAR GR F G
Sbjct: 592 QLR-ELIRKLKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVAR----RSVGRTFCTMDGR 646
Query: 936 GAKVRLHPHS 945
G+ V +HP S
Sbjct: 647 GSPVHIHPSS 656
Score = 287 (106.1 bits), Expect = 2.2e-60, Sum P(2) = 2.2e-60
Identities = 63/201 (31%), Positives = 115/201 (57%)
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISA 248
PI + I V N ++++G TG GKTTQ+P++L E +S+ + TQPR+++A
Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGV--TQPRKVAA 111
Query: 249 TSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
SVA+R++ E +G +GY++R + K ++I + T+G LL+ ++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGD---------- 161
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML----PSYP-HLRLILMSATLDADR 363
P +++ + II+DE HER +D + +++ + P+ HL++++MSAT++ +
Sbjct: 162 -P---NLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAK 217
Query: 364 FSQYFGGCPVIQVPGFTYPVK 384
S +FG CP+ +PG YPV+
Sbjct: 218 LSAFFGNCPIFDIPGRLYPVR 238
Score = 50 (22.7 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPN 452
DP LT+ + LDEA + D LL+ + E SPN
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPN 199
Score = 37 (18.1 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 382 PVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPE---LTEENKSTLDEAIS 430
P++ ++ D+L L ++ L S + ED +EN L + IS
Sbjct: 686 PIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNKENVKQLKDGIS 737
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 405 (147.6 bits), Expect = 2.4e-60, Sum P(2) = 2.4e-60
Identities = 83/198 (41%), Positives = 122/198 (61%)
Query: 610 VFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKAS 669
VF PPG RK ILSTNIAET++TID + +V+DSG++KE SYDP + LQ W+S+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 670 AKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDF 729
A+QR GRAGR G+C+ LY++ + + VPEI+R+ ++ L LQ+K + + F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVG-DPRTF 458
Query: 730 LQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDC 789
++PP ++ AI+ L+D GAL E +T +G L L V ++ KML +
Sbjct: 459 --PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSL 516
Query: 790 LDPALTLACASDYRDPFT 807
++P LT+A A + PFT
Sbjct: 517 VEPVLTIAAALSVQSPFT 534
Score = 282 (104.3 bits), Expect = 2.4e-60, Sum P(2) = 2.4e-60
Identities = 60/149 (40%), Positives = 88/149 (59%)
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
+ CTQPRRI+ S+A+R+ E G +GY+IR ES + IVF T G+LLR
Sbjct: 207 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR---- 262
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+ +P+ L IVDE+HER ++DF+L +++ +LP+ P L++ILMSA
Sbjct: 263 -------QIQREPSLPQYEVL---IVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSA 312
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSF 386
T++ FS YF PV+QVPG +P+ F
Sbjct: 313 TINISLFSSYFSNAPVVQVPGRLFPITVF 341
Score = 243 (90.6 bits), Expect = 3.1e-56, Sum P(2) = 3.1e-56
Identities = 51/116 (43%), Positives = 75/116 (64%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
L ++ ER+ LPI+ + + I T+ +QVV+++G+TGCGK+TQVPQ+LL +S
Sbjct: 152 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----- 206
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
+ CTQPRRI+ S+A+R+ E G +GY+IR ES + IVF T G+LLR
Sbjct: 207 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR 262
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 415 (151.1 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 129/430 (30%), Positives = 208/430 (48%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMD---SE-DGAILVFLPGWEDINKTRDRL--LANP 585
+K+ + P + Q + K+ MD +E G ILVFL G +I K+ + L +A
Sbjct: 239 EKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAES 298
Query: 586 F-----FRDTSK--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
+DT+ +I+P + + + QQ+++F PPPG RK ++STNI+ T++TID +
Sbjct: 299 VDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIR 358
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASL 697
YV+D G +K+ +++P + L+ +SK+ A QR+GRAGR +G C+ +YS+ +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCM 418
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALS 756
PD +PEIKR + + L +K L I D ++ LDPP I A+ L A+
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLA----IHDVIRFPYLDPPNERLILEALKQLYQCDAID 474
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
VT LG + + P ++ + A +DC D L +A + F P+ P +K
Sbjct: 475 RSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK 534
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
A ELA+ GG +D + FE K G A +C ++++ + +
Sbjct: 535 EAEQKHRELAAKAGGFNDFATLAVIFE---QCKSSGAPASWCQKHWIHWRCLFSAFRVEA 591
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG- 935
QL+ ELI+ D + ++ L AG + VAR GR F G
Sbjct: 592 QLR-ELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVAR----RSVGRTFCTMDGR 646
Query: 936 GAKVRLHPHS 945
G+ V +HP S
Sbjct: 647 GSPVHIHPSS 656
Score = 288 (106.4 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 66/201 (32%), Positives = 115/201 (57%)
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISA 248
PI + + V N ++++G TG GKTTQ+P++L E +S+ + TQPR+++A
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGV--TQPRKVAA 111
Query: 249 TSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
SVA+R++ E +G +GY++R + K ++I + T+G LL+ ++ G L N
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHIL--GDPNL----N 165
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR----DMLPSYP-HLRLILMSATLDADR 363
K + II+DE HER +D + +++ D P+ HL++++MSAT++ +
Sbjct: 166 K--------FSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAK 217
Query: 364 FSQYFGGCPVIQVPGFTYPVK 384
S +FG CP+ +PG YPV+
Sbjct: 218 LSAFFGNCPIFDIPGRLYPVR 238
Score = 42 (19.8 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPN 452
DP L + + LDEA + D LL+ + + SPN
Sbjct: 161 DPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPN 199
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 376 (137.4 bits), Expect = 3.4e-60, Sum P(2) = 3.4e-60
Identities = 117/399 (29%), Positives = 200/399 (50%)
Query: 545 LVLIEQLLRKICMDSED--------GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVII 596
+V+I+ + RK + S GA+L+FLPG +I+ + L K I+
Sbjct: 341 IVIIDNMERKAAIQSRQSYDEALRYGAVLIFLPGIYEIDTMAENLTCMLENDPNIKVSIV 400
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
S++ Q+ VF PPPG RKIIL+TNIAE++IT+ DV YVID K K D ++
Sbjct: 401 RCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASS 460
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCL 715
S+L+ +W SKA+ +QRAGR GR ++G Y + ++ +P+F +PE+ R+P++ L
Sbjct: 461 FSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVL 520
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL---------SLDEKVTELGE 766
+ K+L+ +E L L PP I N I++L+++GAL LD +T G
Sbjct: 521 KAKVLNMGSPVE-ILALALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGT 579
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA-KFEL 825
+ L + S+++ + + L+ A+ +A T + +E R+ F +
Sbjct: 580 IMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLS-----TPGLFAHEGGRSQLGDSFWM 634
Query: 826 ASLY--GGQSDQLAVIAAFECWKNAKQRG--QEA---WFCSQYFVSSGVMNMLLGMRKQL 878
++ G SD +A+ + + N + G QE+ W ++ VS + + + ++L
Sbjct: 635 HYIFSDGSGSDLVAIWRVYLTYLNIVENGHDQESAIRW-AKRFHVSLRSLKEIHLLVQEL 693
Query: 879 QTELIKNGFIPEDVS-SCSHNARVPGIIHAVLMAG-LYP 915
+ G IP V+ + + R I+ V++AG YP
Sbjct: 694 RVRCTHLGLIPFPVNPNQMMDDREKAIMLKVIIAGAFYP 732
Score = 339 (124.4 bits), Expect = 3.4e-60, Sum P(2) = 3.4e-60
Identities = 82/223 (36%), Positives = 131/223 (58%)
Query: 185 RSK-LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQP 243
R K L I + ++ I + ++++ VV+I GETGCGKTTQVPQ++L+ + G+ C IV TQP
Sbjct: 111 RDKNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQP 170
Query: 244 RRISATSVAERISVERGENIGDNIGYKIRLESKGG-KHSSIVFCTNGVLLRLLVSQGVSR 302
RRI+A S+A R+ ER +++ L + + +++CT GVLL L++
Sbjct: 171 RRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLIN----- 225
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP-HLRLILMSATLDA 361
NK ++ THI++DE+HERD+ DF+L ++R +L + H+++ILMSAT+DA
Sbjct: 226 -----NKT----LTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDA 276
Query: 362 DRFSQYFGGC----PVIQVPGFT-YPVKSFYLEDVLSILKSAE 399
S YF PVI + ++ FY + + SI+ + E
Sbjct: 277 KELSDYFTTTNSIPPVITTNHRRKHSIEKFYRDQLGSIIWNEE 319
Score = 37 (18.1 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 6/23 (26%), Positives = 14/23 (60%)
Query: 869 NMLLGMRKQLQTELIKNGFIPED 891
N+ R+Q+ E +++ +P+D
Sbjct: 1104 NLSTAQRQQINEEYLRSCQLPQD 1126
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 416 (151.5 bits), Expect = 4.7e-60, Sum P(2) = 4.7e-60
Identities = 129/430 (30%), Positives = 208/430 (48%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMD---SE-DGAILVFLPGWEDINKTRDRL--LANP 585
+K+ + P + Q + K+ MD +E G ILVFL G +I K+ + L +A
Sbjct: 239 EKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAES 298
Query: 586 F-----FRDTSK--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
+DT+ +I+P + + + QQ+++F PPPG RK ++STNI+ T++TID +
Sbjct: 299 VDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIR 358
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASL 697
YV+D G +K+ +++P + L+ +SK+ A QR+GRAGR +G C+ +YS+ +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 418
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALS 756
PD +PEIKR + + L +K L I D ++ LDPP I A+ L A+
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLA----IHDVIRFPYLDPPNERLILEALKQLYQCDAID 474
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
VT LG + + P ++ + A +DC D L +A + F P+ P +K
Sbjct: 475 RSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK 534
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
A ELA+ GG +D + FE K G A +C ++++ + +
Sbjct: 535 EAEQRHRELAAKAGGFNDFATLAVIFE---QCKSSGAPASWCQKHWIHWRCLFSAFRVEA 591
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG- 935
QL+ ELI+ D + ++ L AG + VAR GR F G
Sbjct: 592 QLR-ELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVAR----RSVGRTFCTMDGR 646
Query: 936 GAKVRLHPHS 945
G+ V +HP S
Sbjct: 647 GSPVHIHPSS 656
Score = 285 (105.4 bits), Expect = 4.7e-60, Sum P(2) = 4.7e-60
Identities = 62/201 (30%), Positives = 115/201 (57%)
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISA 248
PI + + V N ++++G TG GKTTQ+P++L E +S+ + TQPR+++A
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGV--TQPRKVAA 111
Query: 249 TSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
SVA+R++ E +G +GY++R + K ++I + T+G LL+ ++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGD---------- 161
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML----PSYP-HLRLILMSATLDADR 363
P +++ + II+DE HER +D + +++ + P+ HL++++MSAT++ +
Sbjct: 162 -P---NLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAK 217
Query: 364 FSQYFGGCPVIQVPGFTYPVK 384
S +FG CP+ +PG YPV+
Sbjct: 218 LSAFFGNCPIFDIPGRLYPVR 238
Score = 50 (22.7 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPN 452
DP LT+ + LDEA + D LL+ + E SPN
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPN 199
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 416 (151.5 bits), Expect = 4.7e-60, Sum P(2) = 4.7e-60
Identities = 129/430 (30%), Positives = 208/430 (48%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMD---SE-DGAILVFLPGWEDINKTRDRL--LANP 585
+K+ + P + Q + K+ MD +E G ILVFL G +I K+ + L +A
Sbjct: 239 EKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAES 298
Query: 586 F-----FRDTSK--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
+DT+ +I+P + + + QQ+++F PPPG RK ++STNI+ T++TID +
Sbjct: 299 VDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIR 358
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASL 697
YV+D G +K+ +++P + L+ +SK+ A QR+GRAGR +G C+ +YS+ +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 418
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALS 756
PD +PEIKR + + L +K L I D ++ LDPP I A+ L A+
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLA----IHDVIRFPYLDPPNERLILEALKQLYQCDAID 474
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
VT LG + + P ++ + A +DC D L +A + F P+ P +K
Sbjct: 475 RSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK 534
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
A ELA+ GG +D + FE K G A +C ++++ + +
Sbjct: 535 EAEQRHRELAAKAGGFNDFATLAVIFE---QCKSSGAPASWCQKHWIHWRCLFSAFRVEA 591
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG- 935
QL+ ELI+ D + ++ L AG + VAR GR F G
Sbjct: 592 QLR-ELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVAR----RSVGRTFCTMDGR 646
Query: 936 GAKVRLHPHS 945
G+ V +HP S
Sbjct: 647 GSPVHIHPSS 656
Score = 285 (105.4 bits), Expect = 4.7e-60, Sum P(2) = 4.7e-60
Identities = 62/201 (30%), Positives = 115/201 (57%)
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISA 248
PI + + V N ++++G TG GKTTQ+P++L E +S+ + TQPR+++A
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGV--TQPRKVAA 111
Query: 249 TSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
SVA+R++ E +G +GY++R + K ++I + T+G LL+ ++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGD---------- 161
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML----PSYP-HLRLILMSATLDADR 363
P +++ + II+DE HER +D + +++ + P+ HL++++MSAT++ +
Sbjct: 162 -P---NLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAK 217
Query: 364 FSQYFGGCPVIQVPGFTYPVK 384
S +FG CP+ +PG YPV+
Sbjct: 218 LSAFFGNCPIFDIPGRLYPVR 238
Score = 50 (22.7 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPN 452
DP LT+ + LDEA + D LL+ + E SPN
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPN 199
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 404 (147.3 bits), Expect = 6.4e-60, Sum P(4) = 6.4e-60
Identities = 86/213 (40%), Positives = 134/213 (62%)
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPI+ +++ I +TV+SN V +I G+TG GKTTQVPQ++L+H C IV TQPRRI+
Sbjct: 142 LPITGYQEEIITTVESNSVTVIQGDTGSGKTTQVPQYILDHYARANRWCNIVVTQPRRIA 201
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
A S+A R++ ERG +G +GY++ ++ + + + + F T GVLL+ L++
Sbjct: 202 AISIARRVADERGWRLGGIVGYQVGMDKQQSEDTRLSFVTTGVLLQKLINT--------- 252
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP-HLRLILMSATLDADRFSQ 366
+++ TH+I+DE+HERD+ +DF L + R +L S H++++LMSATLD+ F+
Sbjct: 253 -----KNMNQFTHVILDEVHERDQETDFALLVARKLLRSNSRHVKVVLMSATLDSSMFAG 307
Query: 367 YFG----G----CPVIQVPGFTYPVKSFYLEDV 391
YF G PV+ V G +PV FY+ED+
Sbjct: 308 YFSIPVRGELAPAPVVTVEGRLFPVTEFYVEDL 340
Score = 293 (108.2 bits), Expect = 6.4e-60, Sum P(4) = 6.4e-60
Identities = 66/146 (45%), Positives = 91/146 (62%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
G +LVFLPG +IN T D LLA+ R K ++PLHS + S +Q +VF P P RK+
Sbjct: 392 GTVLVFLPGLAEIN-TLDELLAHETTR--YKLWVLPLHSTITSEEQAQVFVPPRPHQRKV 448
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
ILSTNIAE++IT+ D+ YVID K DP N +LQ +W S+A+ QR GRAGR
Sbjct: 449 ILSTNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQANCTQRKGRAGRVS 508
Query: 682 AGICYHLYS-QLRAASLPDFQVPEIK 706
+G Y + S + LP++ +PE++
Sbjct: 509 SGRAYRMVSREFYDIHLPEYGIPEMQ 534
Score = 69 (29.3 bits), Expect = 6.4e-60, Sum P(4) = 6.4e-60
Identities = 39/170 (22%), Positives = 69/170 (40%)
Query: 758 DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPN-EKK 816
D +T +G L L V + K+L + L L + + + F P + E
Sbjct: 550 DGDLTFIGRVLAALPVDVRVGKLLLLGHVFGYLKEVLVIGASLSLKSFFAKPFRGDLESY 609
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG------QEAWFCSQYFVSSGVMNM 870
R+ A E G SD LA++ A++ W++ Q G QE + + + M
Sbjct: 610 RSKMAWSE-----GTFSDCLAMLNAYKKWQDCCQAGMFRNRQQELEWAKRNMLQLKRMKE 664
Query: 871 LLGMRKQLQTEL----IKNGFIPEDVSSCSHNARVPGIIHAVLMAG-LYP 915
+ + K+LQ L I+ + + S + +I +++AG YP
Sbjct: 665 MSAVAKELQDRLANFNIRVSLERNPLVNHSRDTSQDNLILKMVLAGAFYP 714
Score = 48 (22.0 bits), Expect = 1.4e-22, Sum P(4) = 1.4e-22
Identities = 21/71 (29%), Positives = 31/71 (43%)
Query: 399 ESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVY---N 455
+ + LD A + + D +++ N LD SLA D LE L S N+Y N
Sbjct: 77 QQHELDMAQDDLESIDERMSDLNALDLDSINSLA--GDLGRQTLEEDPLR-SVNIYRNYN 133
Query: 456 YQHTLTGLTPL 466
+ HT P+
Sbjct: 134 FNHTYNPTLPI 144
Score = 46 (21.3 bits), Expect = 6.4e-60, Sum P(4) = 6.4e-60
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 1132 DKCPAARNRGTGQNPSNFLMSLMSPNTRQYFPLRDHKSRIPAHKGS---TKGNQLSTQVA 1188
D+ A R+ +G NP +M P Q + + + P +G + + + A
Sbjct: 723 DEAEAVRDL-SGSNPLTTVMLRGMPPAPQLYLKQLGAAMRPCGEGKFIKLEDTRAYVEFA 781
Query: 1189 QPPLFHGSPVV 1199
PP +HG+ V+
Sbjct: 782 PPPDYHGTGVL 792
Score = 43 (20.2 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 409 IVPNEDPELTEENKSTLDEAISL 431
I+P+ D E+T + + T D+ I++
Sbjct: 1197 ILPDHDLEITFDTRFTSDDLIAV 1219
Score = 37 (18.1 bits), Expect = 3.8e-30, Sum P(4) = 3.8e-30
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILV 566
+NP DL I ++L + +D G +L+
Sbjct: 546 INPHDGDLTFIGRVLAALPVDVRVGKLLL 574
Score = 37 (18.1 bits), Expect = 3.8e-30, Sum P(4) = 3.8e-30
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQK 732
CQAG+ + +L A Q+ +K + LQ +L N NI L++
Sbjct: 637 CQAGMFRNRQQELEWAKRNMLQLKRMKEMSAVAKELQDRLA--NFNIRVSLER 687
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 404 (147.3 bits), Expect = 9.3e-60, Sum P(2) = 9.3e-60
Identities = 122/386 (31%), Positives = 195/386 (50%)
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDI---NKT-RDRLLANPFFRDTSKFVIIPLHS 600
LV + Q+ ++ S+D ILVFL G E+I +KT RD +A +++PL++
Sbjct: 184 LVSVFQIHQE-APSSQD--ILVFLTGQEEIEAVSKTCRD--IAKHLPDGCPSMLVLPLYA 238
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+P QQ +VF+ P GCRK+I++TNIAET+ITI + YV+D+G +K K Y+P + + L
Sbjct: 239 SLPYAQQLRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVL 298
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
VSK A QRAGRAGR +GICY LY++ VPEI+R + + LQ+ +
Sbjct: 299 AVQRVSKTQAWQRAGRAGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAM 358
Query: 721 D-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK---VTELGEKLGCLSVHPL 776
PN DF+ K P ++ A+ L +GAL + +T +G K+ + P
Sbjct: 359 KVPNVLTFDFMSK----PSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPK 414
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
+K + + C + LT+ P S ++ +A KF L+S + D +
Sbjct: 415 FAKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPSRRDEVQAMRKKF-LSS----EGDHI 469
Query: 837 AVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS 896
++ + +K+ G + W C + FV+S M + +R QL+ +K +P + SC
Sbjct: 470 TLLNIYRTFKSLG--GDKDW-CRENFVNSRNMMLAAEVRAQLRDICLKMS-MP--MVSCR 523
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRP 922
+ I L L+ A L+P
Sbjct: 524 GDVES---IRRCLAHSLFMSAAELQP 546
Score = 285 (105.4 bits), Expect = 9.3e-60, Sum P(2) = 9.3e-60
Identities = 72/185 (38%), Positives = 106/185 (57%)
Query: 209 ISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIG 268
+SGETG GKTTQ+PQ+L E G I TQPRR++A S+A R+S E+ +G +G
Sbjct: 4 LSGETGSGKTTQLPQYLYEG--GIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVG 61
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y +R + + + I F T+G+LLR +S S L++ S II+DE HE
Sbjct: 62 YTVRFDDVSSEDTRIKFLTDGMLLREAISD--SLLRKYSC------------IILDEAHE 107
Query: 329 RDRYSDFMLAII------RDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
R ++D + ++ R L P L++I+MSAT+D D FSQYF G V+ + G +P
Sbjct: 108 RTVHTDVLFGVVKAAQRRRKELRKLP-LKVIVMSATMDVDLFSQYFNGASVLYLEGRQHP 166
Query: 383 VKSFY 387
++ FY
Sbjct: 167 IQVFY 171
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 399 (145.5 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 115/348 (33%), Positives = 181/348 (52%)
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDI---NKT-RDRLLANPFFRDTSKFVIIPLHS 600
LV + Q+ ++ S+D ILVFL G E+I +KT RD +A +++PL++
Sbjct: 275 LVSVFQIHQE-APSSQD--ILVFLTGQEEIEAMSKTCRD--IAKHLPDGCPAMLVLPLYA 329
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+P QQ +VF+ P G RK+I+STNIAET+ITI + YV+D+G +K K Y+P + + L
Sbjct: 330 SLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVL 389
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
VSK A QR GRAGR +GICY LY++ VPEI+R + + LQ+ +
Sbjct: 390 AVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAM 449
Query: 721 D-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS-LDEKVT--ELGEKLGCLSVHPL 776
PN DF+ K P I+ AI L +GAL D+++T +G K+ + P
Sbjct: 450 KVPNVLTFDFMSK----PSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPK 505
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
+K + + C + LT+ P S E+ + KF ++S + D +
Sbjct: 506 FAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKF-ISS----EGDHM 560
Query: 837 AVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
++ + +KN G + W C + FV+S M ++ +R QL+ +K
Sbjct: 561 TLLNIYRTFKNLG--GNKDW-CKENFVNSKNMTLVAEVRAQLRDICLK 605
Score = 296 (109.3 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 77/215 (35%), Positives = 121/215 (56%)
Query: 180 QIVE-ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ VE +R LPI + + + + + ++ GETG GKTTQ+PQ+L E S+ I
Sbjct: 65 EAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGI--I 122
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
TQPRR++A S+A R+S E+ +G +GY +R + + + I F T+G+LLR +S
Sbjct: 123 AVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISD 182
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII------RDMLPSYPHLRL 352
S L++ S +I+DE HER ++D + ++ R L P L++
Sbjct: 183 --SLLRKYSC------------VILDEAHERTIHTDVLFGVVKAAQKRRKELGKLP-LKV 227
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
I+MSAT+D D FSQYF G PV+ + G +P++ FY
Sbjct: 228 IVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFY 262
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 416 (151.5 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 129/430 (30%), Positives = 208/430 (48%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMD---SE-DGAILVFLPGWEDINKTRDRL--LANP 585
+K+ + P + Q + K+ MD +E G ILVFL G +I K+ + L +A
Sbjct: 317 EKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAES 376
Query: 586 F-----FRDTSK--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
+DT+ +I+P + + + QQ+++F PPPG RK ++STNI+ T++TID +
Sbjct: 377 VDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIR 436
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASL 697
YV+D G +K+ +++P + L+ +SK+ A QR+GRAGR +G C+ +YS+ +
Sbjct: 437 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 496
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALS 756
PD +PEIKR + + L +K L I D ++ LDPP I A+ L A+
Sbjct: 497 PDHVIPEIKRTSLTSVVLTLKCLA----IHDVIRFPYLDPPNERLILEALKQLYQCDAID 552
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
VT LG + + P ++ + A +DC D L +A + F P+ P +K
Sbjct: 553 RSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK 612
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
A ELA+ GG +D + FE K G A +C ++++ + +
Sbjct: 613 EAEQRHRELAAKAGGFNDFATLAVIFE---QCKSSGAPASWCQKHWIHWRCLFSAFRVEA 669
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG- 935
QL+ ELI+ D + ++ L AG + VAR GR F G
Sbjct: 670 QLR-ELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVAR----RSVGRTFCTMDGR 724
Query: 936 GAKVRLHPHS 945
G+ V +HP S
Sbjct: 725 GSPVHIHPSS 734
Score = 283 (104.7 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 62/201 (30%), Positives = 115/201 (57%)
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISA 248
PI + + V N ++++G TG GKTTQ+P++L E +S+ + TQPR+++A
Sbjct: 132 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGV--TQPRKVAA 189
Query: 249 TSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
SVA+R++ E +G +GY++R + K ++I + T+G LL+ ++
Sbjct: 190 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGD---------- 239
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML----PSYP-HLRLILMSATLDADR 363
P +++ + II+DE HER +D + +++ + P+ HL++++MSAT++ +
Sbjct: 240 -P---NLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAK 295
Query: 364 FSQYFGGCPVIQVPGFTYPVK 384
S +FG CP+ +PG YPV+
Sbjct: 296 LSAFFGNCPIFDIPGRLYPVR 316
Score = 50 (22.7 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPN 452
DP LT+ + LDEA + D LL+ + E SPN
Sbjct: 239 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPN 277
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 354 (129.7 bits), Expect = 1.8e-59, Sum P(2) = 1.8e-59
Identities = 81/234 (34%), Positives = 135/234 (57%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
S E + +SL SR +++ R LP+ K I S ++SN V ++ GETG G
Sbjct: 56 SNKENVLTYKSLKSRAS------DLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSG 109
Query: 217 KTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
K+TQ+PQF+LE ++ + I TQPRR++A ++A R++ E G +G+ +GY +R ++
Sbjct: 110 KSTQIPQFVLEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNT 169
Query: 277 GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFM 336
+ + + T+G+LLR L+ S L+E S I++DE HER +D +
Sbjct: 170 TTTRTRLKYLTDGMLLRELMMN--SDLREYSV------------IVIDEAHERTVLTDLI 215
Query: 337 LAIIRDMLPS-YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
L ++ ++ P LR+I+MSATL A++FS++F P++ V G + VK +YL+
Sbjct: 216 LGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLK 269
Score = 344 (126.2 bits), Expect = 1.8e-59, Sum P(2) = 1.8e-59
Identities = 130/460 (28%), Positives = 210/460 (45%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINK--TRDRLLANPFFRDTS 591
YL +++D V+ + +I E G IL FLPG E+I+K T +A + D +
Sbjct: 267 YLKAPTDDIVDAVI--RCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAK-YVSDEA 323
Query: 592 KFVII---PLHSMVPSVQQKKVFKRPPPGC-RKIILSTNIAETAITIDDVVYVIDSGRMK 647
+I PL++ +P+VQQ VF P G RK++ STNIAET++TI V +V+DSG K
Sbjct: 324 PVPLIVPYPLYAALPAVQQSLVFA-PIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRK 382
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKR 707
K + ++TL + +S+ASA QR+GRAGR G + LY + LP PEI R
Sbjct: 383 VKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVKLPKQSEPEIAR 442
Query: 708 IPIEELCLQVKLLDPNCNIEDFLQKT-LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766
+ L +K ++D L T + P I + L ++GAL K+T+ G+
Sbjct: 443 SDVTSPVLMLK----RYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRGQ 498
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
++ L + P +S +L A + CL + + + P SP E+ + L
Sbjct: 499 QMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNP-SPEERDEVNERRLSLC 557
Query: 827 SL---YGG--QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQT- 880
+ YG +L I +E K+ + +C +S ++ +R QL+
Sbjct: 558 NAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVY 617
Query: 881 -ELIKNGFIPEDVSS--CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA 937
+ + + ED S + + I + G A + P ++ R V T G
Sbjct: 618 CKRLFSSISEEDEESKKIGEDGELISKILKCFLTGFIKNTA-IGMPDRSYRT-VST--GE 673
Query: 938 KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRN 977
+ +HP S+ F K+ CP ++Y E G + RN
Sbjct: 674 PISIHPSSMLF---MNKS--CPGIMYTEYVFTTKG-YARN 707
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 408 (148.7 bits), Expect = 6.2e-59, Sum P(2) = 6.2e-59
Identities = 131/440 (29%), Positives = 212/440 (48%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMD---SE-DGAILVFLPGWEDINKTRDRL--LANP 585
+K+ + P + Q + K+ MD +E G ILVFL G +I K+ + L +A
Sbjct: 239 EKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAES 298
Query: 586 F-----FRDTSK--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
+DT+ +I+P + + + QQ+++F PPPG RK ++STNI+ T++TID +
Sbjct: 299 VDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIR 358
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASL 697
YV+D G +K+ +++P + L+ +SK+ A QR+GRAGR +G C+ +YS+ +
Sbjct: 359 YVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCM 418
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALS 756
PD +PEIKR + + L +K L I D ++ LDPP I A+ L A+
Sbjct: 419 PDHVIPEIKRTSLTSVVLTLKCLA----IHDVIRFPYLDPPNERLILEALKQLYQCDAID 474
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
VT LG + + P ++ + A +DC D L +A + F P+ P +K
Sbjct: 475 RSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK 534
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
A ELA+ GG +D + FE K G A +C ++++ + +
Sbjct: 535 EAEQRHRELAAKAGGFNDFATLAVIFE---QCKSSGAPASWCQKHWIHWRCLFSAFRVEA 591
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG- 935
QL+ ELI+ D + ++ L AG + VAR GR F G
Sbjct: 592 QLR-ELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVAR----RSVGRTFCTMDGR 646
Query: 936 GAKVRLHPHSLNFKLSFKKT 955
G+ V +H N KL ++T
Sbjct: 647 GSPVHIHQ---NCKLHEQET 663
Score = 283 (104.7 bits), Expect = 6.2e-59, Sum P(2) = 6.2e-59
Identities = 62/201 (30%), Positives = 115/201 (57%)
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISA 248
PI + + V N ++++G TG GKTTQ+P++L E +S+ + TQPR+++A
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGV--TQPRKVAA 111
Query: 249 TSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
SVA+R++ E +G +GY++R + K ++I + T+G LL+ ++
Sbjct: 112 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGD---------- 161
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML----PSYP-HLRLILMSATLDADR 363
P +++ + II+DE HER +D + +++ + P+ HL++++MSAT++ +
Sbjct: 162 -P---NLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAK 217
Query: 364 FSQYFGGCPVIQVPGFTYPVK 384
S +FG CP+ +PG YPV+
Sbjct: 218 LSAFFGNCPIFDIPGRLYPVR 238
Score = 50 (22.7 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPN 452
DP LT+ + LDEA + D LL+ + E SPN
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPN 199
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 365 (133.5 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
Identities = 106/362 (29%), Positives = 176/362 (48%)
Query: 562 GAILVFLPGWEDINKTRDRLLAN-PFFRDT-SKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
G ILVFL G E+I+ + L D+ + +I+P++S +PS Q K+F+ P G R
Sbjct: 692 GDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSR 751
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K++ +TNIAET+ITID + YV+D G K Y+ + L S +S+A A QR GRAGR
Sbjct: 752 KVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGR 811
Query: 680 CQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPP 737
G CY LY++ + + + VPEI+R + L +K + I D L+ +DPP
Sbjct: 812 TGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAM----GINDLLKFDFMDPP 867
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
+ NA+ L + +L + K+T LG+++ + P +S+ L ++ C D +T+
Sbjct: 868 PKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTII 927
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF 857
++ F P K R A + A + D L ++ + W+ A Q +
Sbjct: 928 SMLSVQNVFYRP-----KDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQ---Y 979
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
C F+ + ++ Q+ K G + SC H+ P +I ++G +
Sbjct: 980 CKTNFLHFRHLKRARDVKSQISMIFKKIGL---KLISC-HSD--PDLIRKTFVSGFFMNA 1033
Query: 918 AR 919
A+
Sbjct: 1034 AK 1035
Score = 342 (125.4 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
Identities = 79/207 (38%), Positives = 122/207 (58%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I +R LP+ + + + V NQ ++I GETG GKTTQ+ Q+L E +S I C
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGM--IGC 533
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R++ E G +G ++GY IR E G + I + T+G+L R
Sbjct: 534 TQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQR------- 586
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
EA P ++S + I++DE HER +D + A+++ P L++I+ SATL+
Sbjct: 587 ----EALLDP---EMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLN 639
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFY 387
+ +FS+YF CP+I +PG T+PV+ Y
Sbjct: 640 SAKFSEYFLNCPIINIPGKTFPVEVLY 666
Score = 61 (26.5 bits), Expect = 9.7e-27, Sum P(3) = 9.7e-27
Identities = 30/131 (22%), Positives = 52/131 (39%)
Query: 815 KKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGM 874
K R A + A + D L ++ + W+ A Q +C F+ + +
Sbjct: 940 KDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQ---YCKTNFLHFRHLKRARDV 996
Query: 875 RKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA 934
+ Q+ K G + SC H+ P +I ++G + M A R G + +
Sbjct: 997 KSQISMIFKKIGL---KLISC-HSD--PDLIRKTFVSGFF-MNAAKRDSQV-GYKTIN-- 1046
Query: 935 GGAKVRLHPHS 945
GG +V +HP S
Sbjct: 1047 GGTEVGIHPSS 1057
Score = 40 (19.1 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPIS-SFKDVI 197
+E + + I K NL++ + KL S++D I
Sbjct: 20 IEFVLNIINKSGNLQEFIRNIQKLDAGISYEDSI 53
Score = 39 (18.8 bits), Expect = 5.9e-27, Sum P(3) = 5.9e-27
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLE 448
DPE+++ + LDEA + D LL+ +++
Sbjct: 591 DPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIK 625
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 389 (142.0 bits), Expect = 4.2e-58, Sum P(2) = 4.2e-58
Identities = 110/334 (32%), Positives = 174/334 (52%)
Query: 559 SEDGAILVFLPGWEDI---NKT-RDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
S+D ILVFL G E+I +KT RD +A +++PL++ +P QQ +VF+
Sbjct: 279 SQD--ILVFLTGQEEIEAMSKTCRD--IARHLPDGCPSMLVLPLYASLPYSQQLRVFQGA 334
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
P G RK+I+STNIAET+ITI + YV+D+G +K K Y+P + + L VSK A QR
Sbjct: 335 PKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRT 394
Query: 675 GRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD-PNCNIEDFLQKT 733
GRAGR +GICY LY++ VPEI+R + + LQ+ + PN DF+ K
Sbjct: 395 GRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSK- 453
Query: 734 LDPPVSVTIRNAIIVLQDIGALS-LDEKVT--ELGEKLGCLSVHPLMSKMLFFAILMDCL 790
P I AI L +GAL D+++T +G K+ + P +K + + C
Sbjct: 454 ---PSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCT 510
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
+ LT+ P + ++ ++ KF ++S + D + ++ + +KN
Sbjct: 511 EEILTIVSLLSVDSVLYNPPARRDEVQSVRKKF-ISS----EGDHITLLNIYRTFKNIG- 564
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G + W C + FV+S M ++ +R QL+ +K
Sbjct: 565 -GNKDW-CKENFVNSKNMLLVAEVRAQLREICLK 596
Score = 292 (107.8 bits), Expect = 4.2e-58, Sum P(2) = 4.2e-58
Identities = 77/216 (35%), Positives = 121/216 (56%)
Query: 179 RQIVE-ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
R+ +E +R LPI + + + + + ++ GETG GKTTQ+PQ+L E S+
Sbjct: 55 REALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGI-- 112
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I TQPRR++A S+A R+S E+ +G +GY +R E + + I F T+G+LLR +S
Sbjct: 113 IAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAIS 172
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII------RDMLPSYPHLR 351
S L++ S +I+DE HER ++D + ++ R L P L+
Sbjct: 173 D--SLLRKYSC------------VILDEAHERTIHTDVLFGVVKTAQKRRKELGKLP-LK 217
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
+I+MSAT+D D FSQYF PV+ + G +P++ FY
Sbjct: 218 VIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFY 253
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 387 (141.3 bits), Expect = 4.8e-58, Sum P(3) = 4.8e-58
Identities = 115/348 (33%), Positives = 172/348 (49%)
Query: 562 GAILVFLPGWEDINKTRDRL--LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
G ILVFL G +++ ++L LA ++ + ++P + +P+ +Q K F P G R
Sbjct: 297 GDILVFLTGQDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGTR 355
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K++++TNIAE +ITI + YVID+G +K ++ N V TL VSKASA+QRAGRAGR
Sbjct: 356 KVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGR 415
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
+ G CY LY + + VPEI+R + LQ+K L N+ F L PP S
Sbjct: 416 IRPGKCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQ-NVHRF--HYLSPPPS 472
Query: 740 VTIRNAIIVLQDIGALSLDEKVTE-LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
+ N + +L +GA+ ++T LG ++ + P+ SK L + C +T+
Sbjct: 473 WAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVA 532
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFC 858
+D F P + KF + G L V F +N + + W C
Sbjct: 533 MMQIQDVFITPYRQRHQADVIRKKFAVEE--GDHMTMLNVFTKFV--ENGRSK---KW-C 584
Query: 859 SQYFVS-SGVMNMLLGMRKQLQTELIKNGFIPEDVSS-----CSHNAR 900
S +FV+ G+M +R QL L+K F E VSS CS N R
Sbjct: 585 SDHFVNYRGLMRAD-NVRSQL-VRLLKR-FEIEKVSSRGLINCSENIR 629
Score = 299 (110.3 bits), Expect = 4.8e-58, Sum P(3) = 4.8e-58
Identities = 90/281 (32%), Positives = 144/281 (51%)
Query: 121 YPPDDG---EPGEKLDANQ--SRKSDKTRGKRVD--IFCKPKMSKAEIAMKVES-LTSRI 172
Y P G EP + A + +R D R IF + A A +E L
Sbjct: 3 YHPGHGHRQEPRKGAGARRGFARPDDSADAPRTGPLIFEERSTENAGAAPPIEEQLKVHN 62
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK 232
A+L I ++R +LPI + I + + ++I GETGCGK+TQVPQFLLE W+
Sbjct: 63 NPYASLN-IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWA- 120
Query: 233 GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLL 292
+ +IV TQPRR++ ++A R++ E+ +G ++GY +R + K + + F T+G+LL
Sbjct: 121 ADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLL 180
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R +++ + +S + I++DE HER +D +L ++R ++ LR+
Sbjct: 181 REILADPL--------------LSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRI 226
Query: 353 ILMSATLDADRFSQYF-----GGCP-----VIQVPGFTYPV 383
I+ SATLDA+ F +F G +I V G T+PV
Sbjct: 227 IVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPV 267
Score = 42 (19.8 bits), Expect = 4.8e-58, Sum P(3) = 4.8e-58
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 1039 VMSSPDKSVTVVVDRWLY 1056
VM + VTV+ WLY
Sbjct: 681 VMQDSIRDVTVIEPEWLY 698
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 343 (125.8 bits), Expect = 3.1e-57, Sum P(3) = 3.1e-57
Identities = 100/330 (30%), Positives = 171/330 (51%)
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
F I P++S + S QQ K+FK+ RKII+STNIAET++T+D + YVID+G K K Y+
Sbjct: 772 FYIFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYN 829
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIE 711
+ LQ + +S+A+A QR+GRAGR AGICY LY++ L +PEI+R +
Sbjct: 830 QTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLS 889
Query: 712 ELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
+ L +K L N+ +F +D P +I N++ L +GA++ + +T++G K+
Sbjct: 890 NVVLLLKSLHVQ-NLFEF--DFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQF 946
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGG 831
+ P +SK++ ++ C L + F NE + KF +
Sbjct: 947 PLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVP----- 1001
Query: 832 QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
+SD L ++ + W++ +W C++ F+ +N + QL ++IK I ++
Sbjct: 1002 ESDHLTLLNIYLQWRSHNY--SYSW-CTKNFIQYKALNKAKEVYSQL-IDIIKTLNI-KN 1056
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLR 921
VS C + +I + +G + A+L+
Sbjct: 1057 VS-CDNKWE---LIRKTICSGYFHNAAKLK 1082
Score = 336 (123.3 bits), Expect = 3.1e-57, Sum P(3) = 3.1e-57
Identities = 88/264 (33%), Positives = 139/264 (52%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDA--NLRQIVEE 184
E + + N S +++K D+F K +E+ ++ +K+ + ++++
Sbjct: 418 EDYDNISYNSS-ENNKEDDNGSDVFDYKKDKIYSSLFNIEN-NNKDKKNTLKDKEELLKL 475
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
+ LPI K + V +N +++I GETG GKTTQ+ Q+L E + + I CTQPR
Sbjct: 476 KESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGI--ICCTQPR 533
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A SVA R+S E +IG +GY IR E K + I + T+G+LLR
Sbjct: 534 RVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLR----------- 582
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
E N D S II+DE HER +D +L I++++ L+LI+ SAT+DA +F
Sbjct: 583 ETLNDKELDKYSV---IIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKF 639
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYL 388
S +FG P+ + G T+ V YL
Sbjct: 640 SAFFGNAPIYNIQGRTFKVHIEYL 663
Score = 57 (25.1 bits), Expect = 3.1e-57, Sum P(3) = 3.1e-57
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 558 DSEDGAILVFLPGWEDINKTRDRLLANPFF 587
D+ G IL+F+ G EDIN T LL+ F+
Sbjct: 689 DNNFGDILIFMTGQEDINATC-YLLSERFY 717
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 343 (125.8 bits), Expect = 3.1e-57, Sum P(3) = 3.1e-57
Identities = 100/330 (30%), Positives = 171/330 (51%)
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
F I P++S + S QQ K+FK+ RKII+STNIAET++T+D + YVID+G K K Y+
Sbjct: 772 FYIFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYN 829
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIE 711
+ LQ + +S+A+A QR+GRAGR AGICY LY++ L +PEI+R +
Sbjct: 830 QTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLS 889
Query: 712 ELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
+ L +K L N+ +F +D P +I N++ L +GA++ + +T++G K+
Sbjct: 890 NVVLLLKSLHVQ-NLFEF--DFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQF 946
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGG 831
+ P +SK++ ++ C L + F NE + KF +
Sbjct: 947 PLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVP----- 1001
Query: 832 QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
+SD L ++ + W++ +W C++ F+ +N + QL ++IK I ++
Sbjct: 1002 ESDHLTLLNIYLQWRSHNY--SYSW-CTKNFIQYKALNKAKEVYSQL-IDIIKTLNI-KN 1056
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLR 921
VS C + +I + +G + A+L+
Sbjct: 1057 VS-CDNKWE---LIRKTICSGYFHNAAKLK 1082
Score = 336 (123.3 bits), Expect = 3.1e-57, Sum P(3) = 3.1e-57
Identities = 88/264 (33%), Positives = 139/264 (52%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDA--NLRQIVEE 184
E + + N S +++K D+F K +E+ ++ +K+ + ++++
Sbjct: 418 EDYDNISYNSS-ENNKEDDNGSDVFDYKKDKIYSSLFNIEN-NNKDKKNTLKDKEELLKL 475
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
+ LPI K + V +N +++I GETG GKTTQ+ Q+L E + + I CTQPR
Sbjct: 476 KESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGI--ICCTQPR 533
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A SVA R+S E +IG +GY IR E K + I + T+G+LLR
Sbjct: 534 RVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLR----------- 582
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
E N D S II+DE HER +D +L I++++ L+LI+ SAT+DA +F
Sbjct: 583 ETLNDKELDKYSV---IIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKF 639
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYL 388
S +FG P+ + G T+ V YL
Sbjct: 640 SAFFGNAPIYNIQGRTFKVHIEYL 663
Score = 57 (25.1 bits), Expect = 3.1e-57, Sum P(3) = 3.1e-57
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 558 DSEDGAILVFLPGWEDINKTRDRLLANPFF 587
D+ G IL+F+ G EDIN T LL+ F+
Sbjct: 689 DNNFGDILIFMTGQEDINATC-YLLSERFY 717
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 415 (151.1 bits), Expect = 7.0e-57, Sum P(2) = 7.0e-57
Identities = 113/381 (29%), Positives = 184/381 (48%)
Query: 559 SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
SE G +L+F+ G +I + + + + + + ++++PLHS Q KVF P G
Sbjct: 370 SERGDVLIFVSGVNEIESVVEAV--HEYATEQTHWLVLPLHSGQAIADQSKVFDYAPEGM 427
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK I+STNIAET++T+D V +V+DSG++KE ++D L+ WVSK+SA QR GRAG
Sbjct: 428 RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAG 487
Query: 679 RCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD-PNCNIEDFLQKTLDPP 737
R G+C+ LY+ + + + PEI R+P++ + LQ+ + P+ F++ P
Sbjct: 488 RTGPGVCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEA----P 543
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
+ I I+ L+ ALS++EK+T LG L L V + KML + ++ LTLA
Sbjct: 544 ETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLA 603
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR--GQEA 855
++P T ++ R + L S +G D ++ + W K R G
Sbjct: 604 AMLSVQNPLTNRAHTDQ--RCVRERESLESDHG---DLFTLVRLYNVWVQLKMRRDGTRQ 658
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYP 915
W C + + + +R+Q Q L G + S + H L L
Sbjct: 659 W-CRRLGIEEQRFYEVTKLRQQFQRILESCGMVVASDSDSQLTSAERATRHGELRQ-LKA 716
Query: 916 MVARLRPPHKNGRRFVETAGG 936
M R R R+ ++ + G
Sbjct: 717 MKRRQRFEQPRQRKLLKQSAG 737
Score = 264 (98.0 bits), Expect = 7.0e-57, Sum P(2) = 7.0e-57
Identities = 63/165 (38%), Positives = 99/165 (60%)
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I CTQPRR++ S+ +R++ E ++ G + ++IR E K ++I+F T G+LLR
Sbjct: 191 IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLR---- 246
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+L A+N D AL I+DEIHER+ + DF+L + + +L + P L+LILMSA
Sbjct: 247 ----QLAVAANL---DQYDAL---ILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSA 296
Query: 358 TLDADRFSQYFG--GCPVIQVPGFTYPVKSFYLEDVLSILKSAES 400
T++ + F YFG G ++QVPG +P+K YL LK+ ++
Sbjct: 297 TINVELFHGYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQA 341
Score = 230 (86.0 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 45/123 (36%), Positives = 80/123 (65%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK 232
EK +R++ + + LPI+ F+ + +D+++VV+++G+TGCGK+TQVPQ+L + +
Sbjct: 131 EKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS 190
Query: 233 GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLL 292
I CTQPRR++ S+ +R++ E ++ G + ++IR E K ++I+F T G+LL
Sbjct: 191 -----IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLL 245
Query: 293 RLL 295
R L
Sbjct: 246 RQL 248
Score = 37 (18.1 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 804 DPFTL--PISPNEKK 816
+PF + P++PNE+K
Sbjct: 1008 NPFAVDFPMTPNEEK 1022
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 416 (151.5 bits), Expect = 8.5e-57, Sum P(4) = 8.5e-57
Identities = 91/213 (42%), Positives = 130/213 (61%)
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PL+S++P+ +Q +VF++PP G R I++TN+AET++TI V YV+DSGR KE+ Y+
Sbjct: 731 VLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNES 790
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEEL 713
N V + + WVSKASA QR+GRAGR G CY LYS + F PEI R+P+E +
Sbjct: 791 NGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESI 850
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ+K + + NI +F T PP V + AI +LQ +GAL E +TE G+K+ +
Sbjct: 851 VLQMKSMAIH-NIINFPFPT--PPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPL 907
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPF 806
P SKML + CL + + A DPF
Sbjct: 908 SPRFSKMLLVSDEKACLPYIVAIVSALSVGDPF 940
Score = 256 (95.2 bits), Expect = 8.5e-57, Sum P(4) = 8.5e-57
Identities = 79/223 (35%), Positives = 122/223 (54%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK-- 237
+I + R +LP+ + I + N VV+I GETG GKTTQVPQFL E + ++
Sbjct: 383 EIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYP 442
Query: 238 --IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
+ TQPRR++A S+AER++ E G++ G +GY+IR +S + + + F T+GVLLR +
Sbjct: 443 GMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREM 501
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII------RDML----P 345
+ +L + S+ II+DE HER+ +D ++ ++ R L P
Sbjct: 502 MHD--FKLTKYSS------------IIIDEAHERNINTDILIGMLSRCVRLRAKLHKENP 547
Query: 346 -SYPHLRLILMSATLDADRFSQ---YFG-GCPVIQVPGFTYPV 383
+ L+LI+MSATL FS+ F PV+QV +PV
Sbjct: 548 IEHKKLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPV 590
Score = 58 (25.5 bits), Expect = 8.5e-57, Sum P(4) = 8.5e-57
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 549 EQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
++ RK C + GAILVFL G ++I RL F+ SK+
Sbjct: 604 DEAFRKTCKIHQKLPPGAILVFLTGQQEITHMVKRLRKEFPFKKNSKY 651
Score = 47 (21.6 bits), Expect = 8.5e-57, Sum P(4) = 8.5e-57
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN----ARVPGIIHAV 908
Q+ F + F+ +M ++ +RKQL +IK+ E+++ N + +P +I
Sbjct: 1020 QKEIFMKKNFLRGKLMEEIVKLRKQLMY-IIKSNTSKENIAVVIRNEDLKSDIPSVIQIK 1078
Query: 909 LM 910
L+
Sbjct: 1079 LL 1080
Score = 45 (20.9 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 411 PNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSL 447
P DPEL +E +S ++ S D+F + L+S+
Sbjct: 973 PGMDPELKKELRSKFYKSRSQFSKLDKFSDVFRLLSV 1009
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 401 (146.2 bits), Expect = 1.3e-56, Sum P(2) = 1.3e-56
Identities = 114/359 (31%), Positives = 189/359 (52%)
Query: 536 ATVNPELIDLVLIEQLL---RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
A+ + + + L+E+++ ++ + GAIL+FLPG I RL +FR K
Sbjct: 197 ASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITRLSHERWFR---K 253
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
++PL+ + +Q++VF R P G RK++++TNIAET+ITIDDV VIDSG +K SY+
Sbjct: 254 LFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYN 313
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEE 712
P + ++L + +S+AS QR GRAGR +AG CY LYS+ + + EI R + E
Sbjct: 314 PLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTLEEIYRTDLSE 373
Query: 713 LCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
+ +++ L I DF + PP + I A L+ +GAL D ++E+G K+ CL
Sbjct: 374 VVMRMAEL----GIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDDRSLSEIG-KMMCL 428
Query: 772 -SVHPLMSKMLFFAILM--DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
+ P S+M+ A+ +D L A R P L S +++++ A
Sbjct: 429 FPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSP--LIFSEDQEEKTKKA------- 479
Query: 829 YGGQSDQLAVIAAF-ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
+G SD + +F ++ Q + FC +++ +M + +++QL ELI +G
Sbjct: 480 HGTFSDPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEISNIKEQL--ELIVSG 536
Score = 263 (97.6 bits), Expect = 1.3e-56, Sum P(2) = 1.3e-56
Identities = 68/197 (34%), Positives = 106/197 (53%)
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRI 246
+LP+ S KD I S + + V+++ TG GKTTQ+P L E +++G + TQPRRI
Sbjct: 6 QLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGV--TQPRRI 63
Query: 247 SATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEA 306
+ SV+E I+ + +GYK+R E + I T+G+LL+ E
Sbjct: 64 AVLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQ-----------EM 112
Query: 307 SNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQ 366
P +S + I+VDE HER DF+L +++ +L R+++ SAT++ FS+
Sbjct: 113 KLDPL---LSKYSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSR 169
Query: 367 YFGGCPVIQVPGFTYPV 383
YF CPVI++ YPV
Sbjct: 170 YFNECPVIKIDAVAYPV 186
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 347 (127.2 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 90/254 (35%), Positives = 135/254 (53%)
Query: 141 DKTR-GKRVDIFCKPKMSKA------EIAMKVESLTSRIEKDANLRQIVEERSKLPISSF 193
D+ R KR+D K K A EIA+ + +E+ +E + LP+S
Sbjct: 33 DRFRFSKRIDGASKIKNESARNAVFDEIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQK 92
Query: 194 KDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAE 253
+D I + +QVV+++GETG GKTTQ+P+ E +G+ I TQPRR++A SVA
Sbjct: 93 RDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAE--LGRGKYGLIGHTQPRRLAARSVAN 150
Query: 254 RISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKD 313
RI+ E +G +GYK+R + + I T+G+LL E N +
Sbjct: 151 RIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLA-----------EIQNDRFLN 199
Query: 314 DVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPV 373
II+DE HER DF+L ++ +LP P L++I+ SAT+D +RFS++F P+
Sbjct: 200 QYDT---IIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPI 256
Query: 374 IQVPGFTYPVKSFY 387
I+V G TYPV+ Y
Sbjct: 257 IEVSGRTYPVEVRY 270
Score = 346 (126.9 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 92/267 (34%), Positives = 148/267 (55%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQ 607
I Q + ++C D G IL+F+ G +I T D L + RDT I+PL++ + + +Q
Sbjct: 289 IFQAVDELC-DEGLGDILIFMNGEREIRDTADAL-SKRNLRDTE---IVPLYARLSAGEQ 343
Query: 608 KKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSK 667
K+F+ P G R+I+L+TN+AET++T+ + YVID G + Y V L +S+
Sbjct: 344 NKIFQ-PHAG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 401
Query: 668 ASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE 727
ASA QR GR GR + GIC LYS+ S P+F PEI R + + LQ+ L +IE
Sbjct: 402 ASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLG-DIE 460
Query: 728 DFLQKTLDPPVSVTIRNAIIVLQDIGALS---LDEK--VTELGEKLGCLSVHPLMSKMLF 782
F ++ P I++ + +L+++GA++ D K +TE G++L L + P +++M+
Sbjct: 461 AF--PFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVL 518
Query: 783 FAILMDCLDPALTLACASDYRDPFTLP 809
A + CL + +A A +DP P
Sbjct: 519 EASKLGCLKEVMIIASALSIQDPRERP 545
Score = 38 (18.4 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYG 830
A +Y D F ++P E A + EL + G
Sbjct: 932 APNYADAFLARVTPFEMPLLDAMEKELRRMTG 963
Score = 38 (18.4 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 481 LLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATV 538
+L L DC D + + G +P+ + +K+H+ L D++ + + K + T+
Sbjct: 1116 VLDLIDDCIACGVD-KLIEERGGMVWEPQAFEALKEHVRAELGDTVVE--IAKQVETI 1170
Score = 37 (18.1 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 6/26 (23%), Positives = 16/26 (61%)
Query: 1062 LDIAQIYCLRERLSVAILFKVTHPQK 1087
L+ +++ CL+E + +A + P++
Sbjct: 518 LEASKLGCLKEVMIIASALSIQDPRE 543
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 347 (127.2 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 90/254 (35%), Positives = 135/254 (53%)
Query: 141 DKTR-GKRVDIFCKPKMSKA------EIAMKVESLTSRIEKDANLRQIVEERSKLPISSF 193
D+ R KR+D K K A EIA+ + +E+ +E + LP+S
Sbjct: 33 DRFRFSKRIDGASKIKNESARNAVFDEIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQK 92
Query: 194 KDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAE 253
+D I + +QVV+++GETG GKTTQ+P+ E +G+ I TQPRR++A SVA
Sbjct: 93 RDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAE--LGRGKYGLIGHTQPRRLAARSVAN 150
Query: 254 RISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKD 313
RI+ E +G +GYK+R + + I T+G+LL E N +
Sbjct: 151 RIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLA-----------EIQNDRFLN 199
Query: 314 DVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPV 373
II+DE HER DF+L ++ +LP P L++I+ SAT+D +RFS++F P+
Sbjct: 200 QYDT---IIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPI 256
Query: 374 IQVPGFTYPVKSFY 387
I+V G TYPV+ Y
Sbjct: 257 IEVSGRTYPVEVRY 270
Score = 346 (126.9 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 92/267 (34%), Positives = 148/267 (55%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQ 607
I Q + ++C D G IL+F+ G +I T D L + RDT I+PL++ + + +Q
Sbjct: 289 IFQAVDELC-DEGLGDILIFMNGEREIRDTADAL-SKRNLRDTE---IVPLYARLSAGEQ 343
Query: 608 KKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSK 667
K+F+ P G R+I+L+TN+AET++T+ + YVID G + Y V L +S+
Sbjct: 344 NKIFQ-PHAG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 401
Query: 668 ASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE 727
ASA QR GR GR + GIC LYS+ S P+F PEI R + + LQ+ L +IE
Sbjct: 402 ASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLG-DIE 460
Query: 728 DFLQKTLDPPVSVTIRNAIIVLQDIGALS---LDEK--VTELGEKLGCLSVHPLMSKMLF 782
F ++ P I++ + +L+++GA++ D K +TE G++L L + P +++M+
Sbjct: 461 AF--PFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVL 518
Query: 783 FAILMDCLDPALTLACASDYRDPFTLP 809
A + CL + +A A +DP P
Sbjct: 519 EASKLGCLKEVMIIASALSIQDPRERP 545
Score = 38 (18.4 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYG 830
A +Y D F ++P E A + EL + G
Sbjct: 932 APNYADAFLARVTPFEMPLLDAMEKELRRMTG 963
Score = 38 (18.4 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 481 LLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATV 538
+L L DC D + + G +P+ + +K+H+ L D++ + + K + T+
Sbjct: 1116 VLDLIDDCIACGVD-KLIEERGGMVWEPQAFEALKEHVRAELGDTVVE--IAKQVETI 1170
Score = 37 (18.1 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 6/26 (23%), Positives = 16/26 (61%)
Query: 1062 LDIAQIYCLRERLSVAILFKVTHPQK 1087
L+ +++ CL+E + +A + P++
Sbjct: 518 LEASKLGCLKEVMIIASALSIQDPRE 543
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 366 (133.9 bits), Expect = 2.4e-56, Sum P(2) = 2.4e-56
Identities = 104/320 (32%), Positives = 158/320 (49%)
Query: 564 ILVFLPGWEDINKTRDRL--LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
+L+FL G E+I ++ LA T+ + L++ + +Q + F P RK+
Sbjct: 284 VLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKV 343
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
IL+TNIAET+ITI + VID G +KEKS++ + + L+S +SKA A QRAGRAGR
Sbjct: 344 ILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDA 403
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVT 741
G CY Y++ S D PEI R + LQ+ LD +CN DFL DPP+
Sbjct: 404 DGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDIDCNNFDFL----DPPLEDG 459
Query: 742 IRNAIIVLQDIGALSL--DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
+R+A L +GA+ D +T LG ++ + P SK+L A C++ L+L
Sbjct: 460 LRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSV 519
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCS 859
F NE AKF+ S +G D L ++ F + K + W C
Sbjct: 520 LSSDHVFVSNSEKNEMAALAHAKFQ--SKHG---DHLTLLNVFNGF--LKSEKPKMW-CH 571
Query: 860 QYFVSSGVMNMLLGMRKQLQ 879
+++ + +R+QL+
Sbjct: 572 DNYLNLRSLTYARNVRRQLR 591
Score = 300 (110.7 bits), Expect = 2.4e-56, Sum P(2) = 2.4e-56
Identities = 80/242 (33%), Positives = 126/242 (52%)
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
P + K +++ + I + I +++ LP+ + + I +++N VLI ET
Sbjct: 34 PILEKKPHVAQIKQTIAPILLTSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSET 93
Query: 214 GCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
G GKTTQ+PQFLL ++K I TQPRR++A +VA R++ E IGD +GY +R
Sbjct: 94 GSGKTTQIPQFLLLAGYAKNGMIGI--TQPRRVAAITVARRVAQELNGTIGDTVGYTVRF 151
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
E + + I F T+GVLLR + RL K V II+DE HER +
Sbjct: 152 EDVTSRATKIRFLTDGVLLRESIKD---RLL------LKYSV-----IILDEAHERTVNA 197
Query: 334 DFMLAIIRDMLPS-----YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
D + I++D +L++++ SAT+D D F YF C + + G TYPV+ +
Sbjct: 198 DLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFN-CKGMYLEGRTYPVRVMHT 256
Query: 389 ED 390
++
Sbjct: 257 KE 258
Score = 43 (20.2 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 24/134 (17%), Positives = 56/134 (41%)
Query: 813 NEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLL 872
N +K AA A D L ++ F + K + W C +++ +
Sbjct: 529 NSEKNEMAALAH-AKFQSKHGDHLTLLNVFNGF--LKSEKPKMW-CHDNYLNLRSLTYAR 584
Query: 873 GMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE 932
+R+QL+ I E + +++ ++ ++ G + +A L+ ++G ++
Sbjct: 585 NVRRQLRE-------ISEHLHLALNSSDDIEMLKKCILNGFFENIAVLQ---RDGF-YIT 633
Query: 933 TAGGAKVRLHPHSL 946
+G + ++HP S+
Sbjct: 634 ASGNIRSKIHPSSV 647
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 353 (129.3 bits), Expect = 4.8e-55, Sum P(3) = 4.8e-55
Identities = 83/235 (35%), Positives = 130/235 (55%)
Query: 153 KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGE 212
K A++A + ++ ++E+ R + LP+S ++ I + +NQVV+I+GE
Sbjct: 41 KKTQELAKLAEQAQAAFEKVEQRLKARPRINYPDNLPVSGMREDIAKAISANQVVIIAGE 100
Query: 213 TGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
TG GKTTQ+P+ LE G I TQPRR++A SVA R++ E +G+ +G+K+R
Sbjct: 101 TGSGKTTQLPKICLE--LGLGSRGFIGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVR 158
Query: 273 LESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
S I T+G+LL L S R + + II+DE HER
Sbjct: 159 FADALKSESYIKLMTDGILLAELTSD---RYLDQYDT-----------IIIDEAHERSLN 204
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DF+L ++ +L P L++I+ SAT+D +RFS++F P+I+V G TYPV++ Y
Sbjct: 205 IDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRY 259
Score = 312 (114.9 bits), Expect = 4.8e-55, Sum P(3) = 4.8e-55
Identities = 102/347 (29%), Positives = 175/347 (50%)
Query: 516 KHMENA--LSDSMKQQLLD-KYLATVNPELIDLVLIEQLLRKIC-MDSED-GAILVFLPG 570
KH NA + S + ++ +Y V DL IE + + + +E G IL+F+ G
Sbjct: 238 KHFNNAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDELVAEGLGDILIFMNG 297
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
+I T ++L + RDT I+PL++ + +Q KVF G R+I+L+TN+AET
Sbjct: 298 EREIRDTAEQLNRRNY-RDTE---ILPLYARLSYGEQSKVFSSHT-G-RRIVLATNVAET 351
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
++T+ + YVID G + Y V L +S+ASA QR GR GR GIC LY
Sbjct: 352 SLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYD 411
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ + P F PEI R + + LQ+ + +I F ++PP IR+ ++L+
Sbjct: 412 EADFNNRPAFTDPEILRTNLASVILQMLAIGLG-DIAAF--PFIEPPDPRHIRDGFLLLE 468
Query: 751 DIGALSLDEK---VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
++ A+ + +T LG +L + V P +++M+ + + CL+ L +A +DP
Sbjct: 469 ELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRE 528
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQE 854
P+ ++K+ + A A QSD ++ + W++ K++ +E
Sbjct: 529 RPM--DKKQASDEAHRRFAD---PQSDFVSWV---NLWQHLKEQQKE 567
Score = 52 (23.4 bits), Expect = 4.8e-55, Sum P(3) = 4.8e-55
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1138 RNRGTGQNPSNFLMSLMSPNTRQYFPLRDHKSRIPA 1173
R GT NP +F +S M + + F + D K ++ A
Sbjct: 944 RMSGTRVNPEDFDVSQMPVHLQMNFKIEDDKGKLVA 979
Score = 43 (20.2 bits), Expect = 4.1e-54, Sum P(3) = 4.1e-54
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMY 1098
LR L + I V H Q+ALP + +MY
Sbjct: 1065 LRRLLLLNIPSPVKHLQQALPNKAKLAMY 1093
Score = 41 (19.5 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDL 545
+L D+M +QLL VNPE D+
Sbjct: 933 SLLDAMCKQLLRMSGTRVNPEDFDV 957
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 353 (129.3 bits), Expect = 4.8e-55, Sum P(3) = 4.8e-55
Identities = 83/235 (35%), Positives = 130/235 (55%)
Query: 153 KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGE 212
K A++A + ++ ++E+ R + LP+S ++ I + +NQVV+I+GE
Sbjct: 41 KKTQELAKLAEQAQAAFEKVEQRLKARPRINYPDNLPVSGMREDIAKAISANQVVIIAGE 100
Query: 213 TGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
TG GKTTQ+P+ LE G I TQPRR++A SVA R++ E +G+ +G+K+R
Sbjct: 101 TGSGKTTQLPKICLE--LGLGSRGFIGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVR 158
Query: 273 LESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
S I T+G+LL L S R + + II+DE HER
Sbjct: 159 FADALKSESYIKLMTDGILLAELTSD---RYLDQYDT-----------IIIDEAHERSLN 204
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DF+L ++ +L P L++I+ SAT+D +RFS++F P+I+V G TYPV++ Y
Sbjct: 205 IDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRY 259
Score = 312 (114.9 bits), Expect = 4.8e-55, Sum P(3) = 4.8e-55
Identities = 102/347 (29%), Positives = 175/347 (50%)
Query: 516 KHMENA--LSDSMKQQLLD-KYLATVNPELIDLVLIEQLLRKIC-MDSED-GAILVFLPG 570
KH NA + S + ++ +Y V DL IE + + + +E G IL+F+ G
Sbjct: 238 KHFNNAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDELVAEGLGDILIFMNG 297
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
+I T ++L + RDT I+PL++ + +Q KVF G R+I+L+TN+AET
Sbjct: 298 EREIRDTAEQLNRRNY-RDTE---ILPLYARLSYGEQSKVFSSHT-G-RRIVLATNVAET 351
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
++T+ + YVID G + Y V L +S+ASA QR GR GR GIC LY
Sbjct: 352 SLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYD 411
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ + P F PEI R + + LQ+ + +I F ++PP IR+ ++L+
Sbjct: 412 EADFNNRPAFTDPEILRTNLASVILQMLAIGLG-DIAAF--PFIEPPDPRHIRDGFLLLE 468
Query: 751 DIGALSLDEK---VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
++ A+ + +T LG +L + V P +++M+ + + CL+ L +A +DP
Sbjct: 469 ELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRE 528
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQE 854
P+ ++K+ + A A QSD ++ + W++ K++ +E
Sbjct: 529 RPM--DKKQASDEAHRRFAD---PQSDFVSWV---NLWQHLKEQQKE 567
Score = 52 (23.4 bits), Expect = 4.8e-55, Sum P(3) = 4.8e-55
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1138 RNRGTGQNPSNFLMSLMSPNTRQYFPLRDHKSRIPA 1173
R GT NP +F +S M + + F + D K ++ A
Sbjct: 944 RMSGTRVNPEDFDVSQMPVHLQMNFKIEDDKGKLVA 979
Score = 43 (20.2 bits), Expect = 4.1e-54, Sum P(3) = 4.1e-54
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMY 1098
LR L + I V H Q+ALP + +MY
Sbjct: 1065 LRRLLLLNIPSPVKHLQQALPNKAKLAMY 1093
Score = 41 (19.5 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDL 545
+L D+M +QLL VNPE D+
Sbjct: 933 SLLDAMCKQLLRMSGTRVNPEDFDV 957
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 339 (124.4 bits), Expect = 6.0e-55, Sum P(2) = 6.0e-55
Identities = 88/262 (33%), Positives = 139/262 (53%)
Query: 160 EIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTT 219
E+A +++ ++ R + LP+S K I + +QVV+++GETG GKTT
Sbjct: 49 EMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTT 108
Query: 220 QVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK 279
Q+P+ +E +G I TQPRR++A +VA RI+ E G IGYK+R
Sbjct: 109 QLPKICME--LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSD 166
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
++ + T+G+LL + Q RL + II+DE HER DF+L
Sbjct: 167 NTMVKLMTDGILLAE-IQQ--DRL-----------LMQYDTIIIDEAHERSLNIDFLLGY 212
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAE 399
++++LP P L++I+ SAT+D +RFS++F P+I+V G TYPV+ Y I++ A+
Sbjct: 213 LKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRP----IVEEAD 268
Query: 400 SNHLDSASLIVPNEDPELTEEN 421
D I D EL++E+
Sbjct: 269 DTERDQLQAIFDAVD-ELSQES 289
Score = 326 (119.8 bits), Expect = 6.0e-55, Sum P(2) = 6.0e-55
Identities = 94/284 (33%), Positives = 151/284 (53%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPF-FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
G IL+F+ G +I T D L N R T I+PL++ + + +Q +VF+ G R+
Sbjct: 291 GDILIFMSGEREIRDTADAL--NKLNLRHTE---ILPLYARLSNSEQNRVFQSHS-G-RR 343
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
I+L+TN+AET++T+ + YVID G + Y V L +S+ASA QR GR GR
Sbjct: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRV 403
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSV 740
GIC LYS+ S P+F PEI R + + LQ+ L +I F ++ P
Sbjct: 404 SEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG-DIAAF--PFVEAPDKR 460
Query: 741 TIRNAIIVLQDIGALSLDE-----KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALT 795
I++ + +L+++GA++ DE K+T LG +L L V P +++M+ A C+ A+
Sbjct: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520
Query: 796 LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
+ A +DP P+ +K++A+ K + +SD LA +
Sbjct: 521 ITSALSIQDPRERPM---DKQQASDEKHR--RFHDKESDFLAFV 559
Score = 41 (19.5 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 433 WSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKA 492
W+ + F L E V E + V + + + + K G V M ++LG +KA
Sbjct: 1129 WTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLS-DIKA 1187
Query: 493 KDG 495
+ G
Sbjct: 1188 QMG 1190
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 576 (207.8 bits), Expect = 8.2e-55, P = 8.2e-55
Identities = 124/284 (43%), Positives = 187/284 (65%)
Query: 533 KYLATVNPELIDLVLIEQLLR-----KICMDSEDGAILVFLPGWEDINKTRDRLLANPFF 587
K ++ ++ E ++L LIE LL K + GAILVFLPG +I ++L +N F
Sbjct: 8 KTMSIMDFEKVNLELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLF 67
Query: 588 --RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
R +++ V+ PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+
Sbjct: 68 NNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGK 127
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA-SLPDFQVPE 704
MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL++ L Q+PE
Sbjct: 128 MKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVTSGVCFHLFTSHHFNHQLLKQQLPE 187
Query: 705 IKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
I+R+P+E+LCL++K+L+ N++ + ++PP ++R + I L+D+GAL+ DEK+T
Sbjct: 188 IQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHPDSLRASKIRLRDLGALTPDEKLT 247
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPF 806
LG L L V + K++ F + CLDPALT+A + ++ PF
Sbjct: 248 PLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPF 291
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 326 (119.8 bits), Expect = 1.2e-54, Sum P(4) = 1.2e-54
Identities = 71/203 (34%), Positives = 129/203 (63%)
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+ L+S +P+ +QK +F+ PP RK+ILSTNIAET++TI ++ YVIDSG++K K +D
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
+ L+ + +SK SA QR+GRAGR G Y +Y++ ++ F +PEI R + ++
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIY 521
Query: 715 LQVKLLDPNCNIE-DFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
L++K ++ N +E +F + +P + + +A ++ + I A+ ++ +T+LG+KL +
Sbjct: 522 LELKAMNINNPLEFNFPE---NPRKELFVHSAKMLFK-INAIDMNNNLTDLGKKLCLFPL 577
Query: 774 HPLMSKMLFFAILMDCLDPALTL 796
+P+ + +L +I +C+D T+
Sbjct: 578 NPIYANILLCSIEFNCIDEIATI 600
Score = 300 (110.7 bits), Expect = 1.2e-54, Sum P(4) = 1.2e-54
Identities = 88/279 (31%), Positives = 143/279 (51%)
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC---------- 236
+LPI +K I + N +++I GETGCGKTTQVPQ + E + K E
Sbjct: 3 ELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKNDE 62
Query: 237 --------KIVCTQPRRISATSVAERISVE--RGENIGDNIGYKIRLESKGGKHSSIVFC 286
K++ + PRR++ +VAER+S E RG+ IG+ +GY IR ++ + I F
Sbjct: 63 KKKRKEKKKMLISLPRRVATITVAERVSKEMKRGD-IGNYVGYTIRFKNVCSDKTRIKFV 121
Query: 287 TNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS 346
T+G+L+R E N P + +I+DEIHER +D +L + +L
Sbjct: 122 TDGILIR-----------EIMNDPL---LKKYKFLILDEIHERSIRTDVLLGYTKILLQK 167
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY----LED-VLSILKSAESN 401
+++ILMSAT D + F+Q+F P+I +P + + +Y +ED +LS++ +
Sbjct: 168 RKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQI 227
Query: 402 HLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDM 440
H + S E+ + ENK +E L SN++ ++
Sbjct: 228 HFGNTSYSSEFENDDDHRENKP--NELNELNKSNEQNEL 264
Score = 73 (30.8 bits), Expect = 1.2e-54, Sum P(4) = 1.2e-54
Identities = 27/122 (22%), Positives = 55/122 (45%)
Query: 834 DQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS 893
D L ++ F W+ A + ++ FC+ Y +++ ++ + ++ QL E++KN E +
Sbjct: 714 DHLTLLHIFYLWQEADIK-EKKHFCNIYALNNEILQQVEKIKIQL-LEIMKNKMKIE-IP 770
Query: 894 SCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFK 953
H + I+ + A + +A+ N ++ K+R+HP S F K
Sbjct: 771 KKLHMHKWDQILICLCKACFFN-IAKST---SNTNVYINLVNKTKIRIHPSSTLFNSYIK 826
Query: 954 KT 955
T
Sbjct: 827 PT 828
Score = 52 (23.4 bits), Expect = 1.2e-54, Sum P(4) = 1.2e-54
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 504 QENQP-EVAQIIKKHMENALSDSMK-QQLLDKYLATVNPELIDLVLIEQL------LRKI 555
+EN+P E+ ++ K + +N L++S + + D Y + ++ ++ L + I
Sbjct: 245 RENKPNELNELNKSNEQNELNESNEVNKEHDSYESNKTHDINEIDEQNNLQTDNISMNNI 304
Query: 556 CMD---SED---GAILVFLPGWEDI 574
D +ED G ILVFLPG E+I
Sbjct: 305 NEDIKKTEDKSLGDILVFLPGQEEI 329
Score = 40 (19.1 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 399 ESNHL--DSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDML 441
E N+L D+ S+ NED + TE+ KS D + L +E +M+
Sbjct: 290 EQNNLQTDNISMNNINEDIKKTED-KSLGDILVFLP-GQEEIEMV 332
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 326 (119.8 bits), Expect = 1.2e-54, Sum P(4) = 1.2e-54
Identities = 71/203 (34%), Positives = 129/203 (63%)
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+ L+S +P+ +QK +F+ PP RK+ILSTNIAET++TI ++ YVIDSG++K K +D
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
+ L+ + +SK SA QR+GRAGR G Y +Y++ ++ F +PEI R + ++
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIY 521
Query: 715 LQVKLLDPNCNIE-DFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
L++K ++ N +E +F + +P + + +A ++ + I A+ ++ +T+LG+KL +
Sbjct: 522 LELKAMNINNPLEFNFPE---NPRKELFVHSAKMLFK-INAIDMNNNLTDLGKKLCLFPL 577
Query: 774 HPLMSKMLFFAILMDCLDPALTL 796
+P+ + +L +I +C+D T+
Sbjct: 578 NPIYANILLCSIEFNCIDEIATI 600
Score = 300 (110.7 bits), Expect = 1.2e-54, Sum P(4) = 1.2e-54
Identities = 88/279 (31%), Positives = 143/279 (51%)
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC---------- 236
+LPI +K I + N +++I GETGCGKTTQVPQ + E + K E
Sbjct: 3 ELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKNDE 62
Query: 237 --------KIVCTQPRRISATSVAERISVE--RGENIGDNIGYKIRLESKGGKHSSIVFC 286
K++ + PRR++ +VAER+S E RG+ IG+ +GY IR ++ + I F
Sbjct: 63 KKKRKEKKKMLISLPRRVATITVAERVSKEMKRGD-IGNYVGYTIRFKNVCSDKTRIKFV 121
Query: 287 TNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS 346
T+G+L+R E N P + +I+DEIHER +D +L + +L
Sbjct: 122 TDGILIR-----------EIMNDPL---LKKYKFLILDEIHERSIRTDVLLGYTKILLQK 167
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY----LED-VLSILKSAESN 401
+++ILMSAT D + F+Q+F P+I +P + + +Y +ED +LS++ +
Sbjct: 168 RKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQI 227
Query: 402 HLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDM 440
H + S E+ + ENK +E L SN++ ++
Sbjct: 228 HFGNTSYSSEFENDDDHRENKP--NELNELNKSNEQNEL 264
Score = 73 (30.8 bits), Expect = 1.2e-54, Sum P(4) = 1.2e-54
Identities = 27/122 (22%), Positives = 55/122 (45%)
Query: 834 DQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS 893
D L ++ F W+ A + ++ FC+ Y +++ ++ + ++ QL E++KN E +
Sbjct: 714 DHLTLLHIFYLWQEADIK-EKKHFCNIYALNNEILQQVEKIKIQL-LEIMKNKMKIE-IP 770
Query: 894 SCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFK 953
H + I+ + A + +A+ N ++ K+R+HP S F K
Sbjct: 771 KKLHMHKWDQILICLCKACFFN-IAKST---SNTNVYINLVNKTKIRIHPSSTLFNSYIK 826
Query: 954 KT 955
T
Sbjct: 827 PT 828
Score = 52 (23.4 bits), Expect = 1.2e-54, Sum P(4) = 1.2e-54
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 504 QENQP-EVAQIIKKHMENALSDSMK-QQLLDKYLATVNPELIDLVLIEQL------LRKI 555
+EN+P E+ ++ K + +N L++S + + D Y + ++ ++ L + I
Sbjct: 245 RENKPNELNELNKSNEQNELNESNEVNKEHDSYESNKTHDINEIDEQNNLQTDNISMNNI 304
Query: 556 CMD---SED---GAILVFLPGWEDI 574
D +ED G ILVFLPG E+I
Sbjct: 305 NEDIKKTEDKSLGDILVFLPGQEEI 329
Score = 40 (19.1 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 399 ESNHL--DSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDML 441
E N+L D+ S+ NED + TE+ KS D + L +E +M+
Sbjct: 290 EQNNLQTDNISMNNINEDIKKTED-KSLGDILVFLP-GQEEIEMV 332
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 432 (157.1 bits), Expect = 1.3e-53, Sum P(4) = 1.3e-53
Identities = 110/335 (32%), Positives = 180/335 (53%)
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PL+S++P+ QQ KVF+ PPPG R I++TN+AET++TI + YV+D GR KE+ Y+
Sbjct: 773 VLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQE 832
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIPIEEL 713
N V + + WVSKASA QRAGRAGR G CY LYS P F VPEI R+P E +
Sbjct: 833 NGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFEDFFPQFSVPEILRMPFESI 892
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK-VTELGEKLGCLS 772
L +K + + I +F T PP +++ A +L +GAL ++K +T+LG+K+
Sbjct: 893 VLSMKSMGID-QIANFPFPT--PPDRFSLKKAEELLVILGALDKEQKQITDLGKKMSLFP 949
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT----LPISPN-EKKRATAAKF---- 823
+ P +K+L +CL + + A DPF L + N E +R KF
Sbjct: 950 LSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGENELVGNMNDEARREFRTKFYHSR 1009
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
L S S+ + +++A + + + Q F ++++ +M + +RKQ+ ++
Sbjct: 1010 ALFSKLDASSNCMMLLSAVCAYDHVPKEEQNG-FLQKHYLRHKMMEEIQKLRKQVGN-IV 1067
Query: 884 KNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVA 918
+N + D ++P I + ++ + M+A
Sbjct: 1068 ENMIMSADGLQLEQKVKLP-IPNKKQVSAMKQMIA 1101
Score = 231 (86.4 bits), Expect = 1.3e-53, Sum P(4) = 1.3e-53
Identities = 79/227 (34%), Positives = 123/227 (54%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE----HIWSKGETC 236
I ++R+ LP+ + + I V + +++ GETG GKTTQVPQFL E ++
Sbjct: 436 IQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPG 495
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLES--KG-GKHS--SIVFCTNGVL 291
I TQPRR++A S+AER+ E G++ G +GY+IR ++ K GK + ++ F T+GVL
Sbjct: 496 MIGVTQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDGVL 554
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML------- 344
LR +++ + AK SA II+DE HER+ +D ++ ++ ++
Sbjct: 555 LREMMTDFLL---------AK--YSA---IIIDEAHERNINTDILIGMLTRVVKLRRKYH 600
Query: 345 ---PS-YPHLRLILMSATLDADRFSQ----YFGGCPVIQVPGFTYPV 383
P Y L+LI+MSATL FS+ + P+I V YPV
Sbjct: 601 KENPQLYKPLKLIIMSATLRVSDFSENPALFKTPPPIINVQARQYPV 647
Score = 44 (20.5 bits), Expect = 1.3e-53, Sum P(4) = 1.3e-53
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 548 IEQLLRKICMDSE---DGAILVFLPGWEDINKTRDRLLAN-PF 586
+E+ +K C +G IL+FL G +I +L PF
Sbjct: 660 LEEAFKKTCKIHRKLPEGGILIFLTGQNEITTLVKKLRQEFPF 702
Score = 41 (19.5 bits), Expect = 5.0e-34, Sum P(3) = 5.0e-34
Identities = 24/110 (21%), Positives = 45/110 (40%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLA-TVNPELIDLVLIE 549
K + TA E Q +I++ +N L+ + +++ KY TV E +D E
Sbjct: 354 KPRHSTTAASFKEWAEQQ--VRIMEGRDKNVLTPEVSEEIKKKYSKQTVRDEDVDHSSDE 411
Query: 550 QLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH 599
+ I + + A +V + + I + R L P F + + + H
Sbjct: 412 EGYIPINKEMQRRAFVVEVNRTDSIQQQRALL---PVFAEEHRIMEAVYH 458
Score = 38 (18.4 bits), Expect = 1.3e-53, Sum P(4) = 1.3e-53
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 153 KPKMSKAEIAMKVESLTSRIEKDANLRQIV-EER 185
K K +K E ++ L + D N R+++ EER
Sbjct: 135 KGKQTKKEEMIEALELERQGRADENTREVLYEER 168
Score = 37 (18.1 bits), Expect = 1.7e-53, Sum P(4) = 1.7e-53
Identities = 9/49 (18%), Positives = 22/49 (44%)
Query: 135 NQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVE 183
++ K + + KR+D + ++ + E + +E L +N + E
Sbjct: 84 SKKEKMSRAKKKRLDKYIDHQLKREEKKILLEKLAETKMDTSNFAALKE 132
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 384 (140.2 bits), Expect = 1.6e-53, Sum P(4) = 1.6e-53
Identities = 95/255 (37%), Positives = 149/255 (58%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + I+E+R LPI + + + S + N +V++ GETG GKTTQ+ Q+L E ++ +
Sbjct: 523 AKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYT--DY 580
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I CTQPRR++A SVA+R+S E G +G+ +GY IR E +++ I + T+G+LLR
Sbjct: 581 GMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLR-- 638
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+EA D+ SA II+DE HER +D + ++R+++ L+L++
Sbjct: 639 -----ESLREAD----LDNYSA---IIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVT 686
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL----ED-VLSILKSAESNHLDSAS--- 407
SAT+DAD+F+ +FG P+ +PG T+PV + ED V + +K A HL A
Sbjct: 687 SATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDI 746
Query: 408 -LIVPN-EDPELTEE 420
+ +P ED E+T E
Sbjct: 747 LVFMPGQEDIEVTSE 761
Score = 202 (76.2 bits), Expect = 1.6e-53, Sum P(4) = 1.6e-53
Identities = 44/120 (36%), Positives = 73/120 (60%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQ 606
++Q L+ + + G ILVF+PG EDI T ++++ + ++P++S +PS
Sbjct: 731 VKQALQ-VHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDL 789
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F++ P G RK I++TNIAET++T+D +++VIDSG K K + L SW+S
Sbjct: 790 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVSKGF-----LYCSWIS 844
Score = 110 (43.8 bits), Expect = 1.6e-53, Sum P(4) = 1.6e-53
Identities = 48/206 (23%), Positives = 82/206 (39%)
Query: 761 VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATA 820
+T G ++ + P +SKML + M C L + F P E+
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 935
Query: 821 AKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQT 880
KF + +SD L + + WKN W C+Q+F+ + M + +R QL+
Sbjct: 936 EKFAVP-----ESDHLTYLNVYLQWKNNNY--STLW-CNQHFIHAKAMRKVREVRAQLKD 987
Query: 881 ELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR 940
+++ ++SC + V + + A + A+L K +V G
Sbjct: 988 IMVQQRM---SLASCGTDWDV---VRKCICAAYFHQAAKL----KGIGEYVNIRTGMPCH 1037
Query: 941 LHPHSLNFKLSFKKTDDCPLMVYDEI 966
LHP S F + + T D +VY E+
Sbjct: 1038 LHPTSSLFGMGY--TPD--YIVYHEL 1059
Score = 49 (22.3 bits), Expect = 1.6e-53, Sum P(4) = 1.6e-53
Identities = 16/76 (21%), Positives = 29/76 (38%)
Query: 120 HYPPDDGEPGEKL-DANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANL 178
H P D P + S S R + P +E + + R ++D ++
Sbjct: 201 HRPKDAATPSRSSWEEEDSSYSSSRRSQWESPSPTPSYRDSERSHRASRDIDRRDRDRSV 260
Query: 179 RQIVEERSKLPISSFK 194
R +++ LP S+K
Sbjct: 261 RSRYSDKTPLPTPSYK 276
Score = 37 (18.1 bits), Expect = 2.9e-52, Sum P(4) = 2.9e-52
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 126 GEPGEKLDANQSRKSDKTRGKR 147
G P E+ D + R TR R
Sbjct: 87 GSPDEEEDEEEDRSGRSTRKDR 108
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 384 (140.2 bits), Expect = 1.7e-53, Sum P(4) = 1.7e-53
Identities = 95/255 (37%), Positives = 149/255 (58%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + I+E+R LPI + + + S + N +V++ GETG GKTTQ+ Q+L E ++ +
Sbjct: 526 AKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYT--DY 583
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I CTQPRR++A SVA+R+S E G +G+ +GY IR E +++ I + T+G+LLR
Sbjct: 584 GMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLR-- 641
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+EA D+ SA II+DE HER +D + ++R+++ L+L++
Sbjct: 642 -----ESLREAD----LDNYSA---IIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVT 689
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL----ED-VLSILKSAESNHLDSAS--- 407
SAT+DAD+F+ +FG P+ +PG T+PV + ED V + +K A HL A
Sbjct: 690 SATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDI 749
Query: 408 -LIVPN-EDPELTEE 420
+ +P ED E+T E
Sbjct: 750 LVFMPGQEDIEVTSE 764
Score = 202 (76.2 bits), Expect = 1.7e-53, Sum P(4) = 1.7e-53
Identities = 44/120 (36%), Positives = 73/120 (60%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQ 606
++Q L+ + + G ILVF+PG EDI T ++++ + ++P++S +PS
Sbjct: 734 VKQALQ-VHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDL 792
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q K+F++ P G RK I++TNIAET++T+D +++VIDSG K K + L SW+S
Sbjct: 793 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVSKGF-----LYCSWIS 847
Score = 110 (43.8 bits), Expect = 1.7e-53, Sum P(4) = 1.7e-53
Identities = 48/206 (23%), Positives = 82/206 (39%)
Query: 761 VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATA 820
+T G ++ + P +SKML + M C L + F P E+
Sbjct: 882 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 941
Query: 821 AKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQT 880
KF + +SD L + + WKN W C+Q+F+ + M + +R QL+
Sbjct: 942 EKFAVP-----ESDHLTYLNVYLQWKNNNY--STLW-CNQHFIHAKAMRKVREVRAQLKD 993
Query: 881 ELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR 940
+++ ++SC + V + + A + A+L K +V G
Sbjct: 994 IMVQQRM---SLASCGTDWDV---VRKCICAAYFHQAAKL----KGIGEYVNIRTGMPCH 1043
Query: 941 LHPHSLNFKLSFKKTDDCPLMVYDEI 966
LHP S F + + T D +VY E+
Sbjct: 1044 LHPTSSLFGMGY--TPD--YIVYHEL 1065
Score = 49 (22.3 bits), Expect = 1.7e-53, Sum P(4) = 1.7e-53
Identities = 16/76 (21%), Positives = 29/76 (38%)
Query: 120 HYPPDDGEPGEKL-DANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANL 178
H P D P + S S R + P +E + + R ++D ++
Sbjct: 204 HRPKDAATPSRSSWEEEDSSYSSSRRSQWESPSPTPSYRDSERSHRASRDIDRRDRDRSV 263
Query: 179 RQIVEERSKLPISSFK 194
R +++ LP S+K
Sbjct: 264 RSRYSDKTPLPTPSYK 279
Score = 37 (18.1 bits), Expect = 3.0e-52, Sum P(4) = 3.0e-52
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 126 GEPGEKLDANQSRKSDKTRGKR 147
G P E+ D + R TR R
Sbjct: 90 GSPDEEEDEEEDRSGRSTRKDR 111
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 419 (152.6 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 120/391 (30%), Positives = 203/391 (51%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I +E ++ KI DG +L FL G E++ L+ A R
Sbjct: 218 YLQSPVPDYIKST-VETVV-KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 275
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K +
Sbjct: 276 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 335
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L VS+ASA QRAGR GR ++G CY LY++ LP VPE++R
Sbjct: 336 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 395
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKL 768
+ + LQ+K L + N+ F + PP + ++ A+ +L +G L D ++TE LG ++
Sbjct: 396 LAPVILQLKALGID-NVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRI 452
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
++P+ +KML + C L++A ++ F +P PN+K A + A
Sbjct: 453 AEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP--PNQKSHAIRVHRKFAVE 510
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
G D L ++ +E + K W C ++F++ + +R+QL+ L+K +
Sbjct: 511 EG---DHLTMLNIYEAF--IKHNKDSKW-CQEHFLNYKGLVRAATVREQLKKLLVKFQ-V 563
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVAR 919
P S P ++ +++G + AR
Sbjct: 564 PRKSSEGD-----PDLVLRCIVSGFFANAAR 589
Score = 211 (79.3 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 69/211 (32%), Positives = 110/211 (52%)
Query: 199 STVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVE 258
+TV N +S E K V ++L E W+ E + TQPRR++A +VA R++ E
Sbjct: 35 TTVVYNPYAALSIEQQRQKLP-VFKYLAEAGWT-AEGRVVGVTQPRRVAAVTVAGRVAEE 92
Query: 259 RGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA 317
RG +G +GY IR + + ++ I F T+G+L+R ++ V L ++
Sbjct: 93 RGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMM---VDPL-----------LTK 138
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG------- 370
+ I++DE HER Y+D + +++ + LRLI+ SATLDAD+F +F
Sbjct: 139 YSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPA 198
Query: 371 ---CPVIQVPGFTYPVKSFYLED-VLSILKS 397
C ++ V G T+PV FYL+ V +KS
Sbjct: 199 RDTCVILTVEGRTFPVDIFYLQSPVPDYIKS 229
>RGD|1563192 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001374
InterPro:IPR011545 Pfam:PF00270 Pfam:PF01424 PROSITE:PS51061
RGD:1563192 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00700000104393
GO:GO:0008026 OrthoDB:EOG4JWVCN IPI:IPI00367844 RefSeq:XP_225959.5
Ensembl:ENSRNOT00000060098 UCSC:RGD:1563192 NextBio:657385
Uniprot:D3ZIV8
Length = 394
Score = 558 (201.5 bits), Expect = 7.0e-53, P = 7.0e-53
Identities = 132/352 (37%), Positives = 199/352 (56%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 45 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 104
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K K ET + + + +K ++ L +P + E E L +
Sbjct: 105 TV-KKKDGSET---AHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 153
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + ++ + R LP+ ++ I +
Sbjct: 154 RGNVFAVEAENREMSKT--SGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 211
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 212 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 271
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ G S L S +TH+I
Sbjct: 272 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-GDSTL------------STVTHVI 318
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI
Sbjct: 319 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 370
>UNIPROTKB|H7C5F5 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018452 EMBL:AC134026 HGNC:HGNC:14410
ProteinModelPortal:H7C5F5 Ensembl:ENST00000469977 Uniprot:H7C5F5
Length = 188
Score = 450 (163.5 bits), Expect = 1.5e-52, Sum P(2) = 1.5e-52
Identities = 82/123 (66%), Positives = 103/123 (83%)
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
IPLHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D N
Sbjct: 2 IPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQN 61
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
N+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCL
Sbjct: 62 NISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCL 121
Query: 716 QVK 718
Q+K
Sbjct: 122 QIK 124
Score = 135 (52.6 bits), Expect = 1.5e-52, Sum P(2) = 1.5e-52
Identities = 29/69 (42%), Positives = 40/69 (57%)
Query: 747 IVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPF 806
+ LQ AL E++T LG L L V P + KM+ F L CLDP LT+A + ++DPF
Sbjct: 119 LCLQIKNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPF 178
Query: 807 TLPISPNEK 815
+P+ EK
Sbjct: 179 VIPLG-KEK 186
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 560 (202.2 bits), Expect = 8.9e-52, Sum P(3) = 8.9e-52
Identities = 161/507 (31%), Positives = 258/507 (50%)
Query: 401 NHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTL 460
N ++S + ++ +E E + ++ L + L + L+++ + + N +Q
Sbjct: 747 NEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPH----LKIIIMSATLNAEKFQLYF 802
Query: 461 TGLTPLMVLAGKG----RVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKK 516
G + L+ + GK R +L G D G+ ++ + E + A I K
Sbjct: 803 EG-SNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQQDASISNK 861
Query: 517 HMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE---DGAILVFLPGWED 573
E+A+ ++ L+ A N + I+ LI LL+ I + + +LVFLPG +
Sbjct: 862 SAEDAI---VEMNLIP---AWYNEKAINYGLIVYLLKYIFTEGDPKFSKCVLVFLPGISE 915
Query: 574 INKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAIT 633
I + + + P FR+ KF I LHS + S QQ+ VF PP GCRKI+LSTNIAET +T
Sbjct: 916 ILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVT 975
Query: 634 IDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR 693
I DV VID+G +E Y+ ++S L ++VSKA+AKQR+GRAGR Q GICYHL+S+ +
Sbjct: 976 IPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFK 1035
Query: 694 A-ASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDI 752
+Q PEI R+ ++E+ L+VK+ +++D L K LDPP S I A+ L +
Sbjct: 1036 HDTQFLSYQTPEILRLNLQEVVLRVKMCQMG-DVQDVLGKALDPPSSTNIIRALEKLHQV 1094
Query: 753 GALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISP 812
GALS +EK+T+LG+ L L V + K+L C+D A ++ PF +
Sbjct: 1095 GALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIGSPFRKSVD- 1153
Query: 813 NEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA--KQRG-QEAWFCSQYFVSSGVMN 869
NE A A+ A +SD + + A+ W+ G E F + +++ ++
Sbjct: 1154 NEFS-ANKARLSFAK-ENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKEKYLNLEALS 1211
Query: 870 MLLGMRKQLQTELIKNGFI-PEDVSSC 895
M ++ QL +EL + DV +C
Sbjct: 1212 MTESLKIQLLSELKDMKLLGASDVDTC 1238
Score = 465 (168.7 bits), Expect = 2.7e-41, Sum P(3) = 2.7e-41
Identities = 108/287 (37%), Positives = 170/287 (59%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R++LP + F++ I V+++Q+++ISG+TGCGK+TQ+P FLLE+ G+ KI T+PR
Sbjct: 628 RNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENSTKNGKAVKIYVTEPR 687
Query: 245 RISATSVAERISVERGEN-----IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
RISA S+A R+S E G N + +GY +RL+SK + + + T G LRLL
Sbjct: 688 RISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLL---- 743
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
E N ++ ++TH+I+DE+HER SD +L + +L +PHL++I+MSATL
Sbjct: 744 -----EVGN-----EIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATL 793
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTE 419
+A++F YF G +I +PG TYPV FYLED+LS + +S + ++ +D E +
Sbjct: 794 NAEKFQLYFEGSNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQ 853
Query: 420 E-----NKSTLDEAISL----AWSNDE---FDM---LLELVSLEGSP 451
+ NKS D + + AW N++ + + LL+ + EG P
Sbjct: 854 QDASISNKSAEDAIVEMNLIPAWYNEKAINYGLIVYLLKYIFTEGDP 900
Score = 73 (30.8 bits), Expect = 8.9e-52, Sum P(3) = 8.9e-52
Identities = 22/116 (18%), Positives = 51/116 (43%)
Query: 93 ETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFC 152
ET ++ SL + L + ++ T P DD + D K + R+ I
Sbjct: 257 ETQPSNQVDDSLKSKDSKPLTMSEVLTQLPEDDIPFDDPFDLTSQYVKVKLKMLRLQIAN 316
Query: 153 KPKMSK-AEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVV 207
K + + + +++ES+TS+ + +IV +S++ + + +++ ++V
Sbjct: 317 KKNSEEFSTLNLQLESITSQYLFSSKEAEIVFRKSRIEFMNKLKALQQKLENERIV 372
Score = 44 (20.5 bits), Expect = 8.9e-52, Sum P(3) = 8.9e-52
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 876 KQLQTELIKN-GFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA 934
K L+ + + IP++ S NA I+ V+ A LYP + LR ++ R++ +
Sbjct: 1239 KSLKRSICRRFAVIPKEHDINSGNAE---ILCGVIAASLYPNI--LRYDYEK-RQWSTLS 1292
Query: 935 GGAKVRLHPHSLN 947
+VR+ S+N
Sbjct: 1293 TNKRVRILDVSVN 1305
Score = 39 (18.8 bits), Expect = 3.1e-48, Sum P(3) = 3.1e-48
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 302 RLKEASNKPAKDDVSALTHIIVDE 325
+++ SN D V A H+++D+
Sbjct: 52 KVENQSNDIGVDTVDAFDHLLLDK 75
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 355 (130.0 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 90/252 (35%), Positives = 135/252 (53%)
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PL+S++ +Q KVF+ PPPG R +++TN+AET++TI + YV+D G++K++ YD
Sbjct: 579 VLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDKI 638
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
VS+ + +W+S+ASA QRAGRAGR + G CY LYS F PEI + P+E+L
Sbjct: 639 TGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDFEKFSAPEITKRPVEDLI 698
Query: 715 LQVKLLDPNCNIEDFLQKTLD-PPVSVTIRNAIIVLQDIGALS-------LDEK------ 760
LQ+K L NIE + PP + + A +L +GAL L E+
Sbjct: 699 LQMKAL----NIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLS 754
Query: 761 --VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
++ LG + V P +KML + DCL +T+ A R+ F E R
Sbjct: 755 CPISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELF------EEFDRP 808
Query: 819 TAAKFELASLYG 830
A++ E L G
Sbjct: 809 AASEEETVKLKG 820
Score = 277 (102.6 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 79/214 (36%), Positives = 117/214 (54%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIV 239
+I E R KLPI + + VI ++ N +V+I GETG GKTTQVPQFL E ++ I
Sbjct: 234 EIQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGI-IG 292
Query: 240 CTQPRRISATSVAERISVERGENIGDNI-GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
T+PRR++A S+++R++ E N+ + Y+IR E + I F T+GVLL
Sbjct: 293 ITEPRRVAAVSMSQRVAKEM--NLSHRVVSYQIRYEGNTTDETQIKFMTDGVLL------ 344
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP-----SYPHLRLI 353
KE +S II+DE HER Y+D ++ ++ ++P P L+LI
Sbjct: 345 -----KEVQKDFL---LSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLP-LKLI 395
Query: 354 LMSATLDADRFSQ---YFGGCP-VIQVPGFTYPV 383
+MSATL + F++ F G P V+QV +PV
Sbjct: 396 IMSATLRVEDFTENTRLFAGTPPVLQVDARQFPV 429
Score = 51 (23.0 bits), Expect = 4.8e-28, Sum P(3) = 4.8e-28
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 482 LSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQL 530
L LG LK DG AL L ++ + + A + + LS K+ L
Sbjct: 33 LELGDGAPLKGIDGSNALVLPAKKEKKKKAPNAVRQQKKPLSKKQKKNL 81
Score = 49 (22.3 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 550 QLLRKICMDSE---DGAILVFLPGWEDINKTRDRLL-ANPFFRDTS 591
+ RK+C G ILVFL G +++ RL A PF ++++
Sbjct: 445 ECFRKVCKIHRMLPSGGILVFLTGQAEVHSLCRRLRKAFPFQKNST 490
Score = 48 (22.0 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 1097 MYAMASILSYDGFSGISLPAESVESLTSMIQATEIDK 1133
+Y+ A + ++ FS + VE L ++A I+K
Sbjct: 672 LYSSAVFMDFEKFSAPEITKRPVEDLILQMKALNIEK 708
Score = 47 (21.6 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 23/114 (20%), Positives = 48/114 (42%)
Query: 122 PPDDGEP-GEKLDANQSRKSDKTRGKRVDIFC--KPKMSKAEIAMKVESLTSRIEKDANL 178
PP EP G +L+ G + K K KA A++ + ++ NL
Sbjct: 22 PPAGAEPAGLQLELGDGAPLKGIDGSNALVLPAKKEKKKKAPNAVRQQKKPLSKKQKKNL 81
Query: 179 RQIVEERSKLP-----ISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
++++E++ K +S +V S + +++ + + G G P+ +L+
Sbjct: 82 QKVLEQKEKKKQRAELLSKLSEVQASQAEM-KLLYTTSKLGIGGRMYQPKRVLQ 134
Score = 44 (20.5 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 578 RDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
RD LLA ++ K+++ +P V V K+ PP
Sbjct: 1106 RDALLAA--WKKNPKYLLAAYCQWIPEVMHDDVAKQWPP 1142
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 322 (118.4 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 85/244 (34%), Positives = 130/244 (53%)
Query: 564 ILVFLPGWEDINKTRDRL--LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
ILVFL G E+I +L L + +PL++ + +QK+ F++ P G RK+
Sbjct: 383 ILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKV 442
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
I+STNIAET++TI + VIDSG++K K ++ +N + L+ VSKA AKQRAGRAGR
Sbjct: 443 IISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDA 502
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVT 741
G CY LYS+ +PEI R + L++ L N K +DPP +
Sbjct: 503 PGKCYRLYSREDFHKFEAENMPEILRCNLSATFLELMKLGMK-NPHRL--KLIDPPETDN 559
Query: 742 IRNAIIVLQDIGAL---SLDEK---VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALT 795
I A++ L +GA+ + D +TE+G+ + P +++LF A C+ A+
Sbjct: 560 INAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIK 619
Query: 796 LACA 799
+ A
Sbjct: 620 IVAA 623
Score = 317 (116.6 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 96/305 (31%), Positives = 153/305 (50%)
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISG 211
P SK M +S + + E+ R +LPI + + + + S + +++ G
Sbjct: 125 PSNSKNATPMSTRKHSSSQQSPPHFEANYEKFSRPQLPIDAVEQQLMYELASQETLIVIG 184
Query: 212 ETGCGKTTQVPQFLLEH-IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYK 270
ETG GK+TQVPQ + I + G I TQPRR++A S+A R++ E G NIG +GY
Sbjct: 185 ETGSGKSTQVPQLCVRAGIANSGS---IAVTQPRRVAAISLASRVATEMGTNIGGIVGYH 241
Query: 271 IRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
+R E+ + I + T+G++LR +A P D S +I+DE HER
Sbjct: 242 VRFENATCHKTKIEYMTDGIVLR-----------KALVSPLLDKYSC---VIIDEAHERS 287
Query: 331 RYSDFMLAIIRDMLPSYPH----LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSF 386
+SD ++ I+R LRLI+MSATL A++F YF V+ V G T+P++ F
Sbjct: 288 LHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVF 347
Query: 387 YLEDVLSILKSAES-NHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELV 445
++ ++ KS S +++ +A + V + LTE D + L S + + +L
Sbjct: 348 HVNPKIN--KSFSSTDYVYNAVICV--KYVHLTEPKGR--DILVFLTGSEEIEAVASQLA 401
Query: 446 SLEGS 450
L GS
Sbjct: 402 ELNGS 406
Score = 49 (22.3 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 40 LASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQ-RRVSVCKSKKRVETDKGK 98
LAS++ + S + V ++C + G+ + S Q RRV+ RV T+ G
Sbjct: 174 LASQETLIVIGETGSGKSTQVP-QLCVRAGIANSGSIAVTQPRRVAAISLASRVATEMGT 232
Query: 99 EI 100
I
Sbjct: 233 NI 234
Score = 41 (19.5 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 85 VCKSKKRVETDKGKEILPSLTFSEGSKLVLQDL 117
+C + KG++IL LT SE + V L
Sbjct: 368 ICVKYVHLTEPKGRDILVFLTGSEEIEAVASQL 400
Score = 37 (18.1 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 68 MGMTSK-SSGRGKQRRVSVCKSKKRVETDKGKEI 100
M + SK + + K+R+ + K K+++ + G +I
Sbjct: 1 MEIKSKFPAWKKKKRKFQIDKDGKKIKPNPGAQI 34
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 322 (118.4 bits), Expect = 5.8e-51, Sum P(2) = 5.8e-51
Identities = 72/208 (34%), Positives = 120/208 (57%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQP 243
++ LPI+ +++ + V+ NQ+ ++ G TGCGKTTQ+PQFL E W+ + I CTQP
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWAS-QNGIIGCTQP 79
Query: 244 RRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRL 303
RR+ A SV+ER+S+E G GY I+ + + + I + T+G+LL
Sbjct: 80 RRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLN---------- 129
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADR 363
E P + S +I+DE+HER +D +L +++ +L RL+L SA++DA++
Sbjct: 130 -EIFFDPLLERYSI---VILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANK 185
Query: 364 FSQYFGGCPV--IQVPGFTYPVKSFYLE 389
SQ+FG V + + G +PV++ +L+
Sbjct: 186 LSQFFGQDKVCTMSIEGKLFPVETLFLQ 213
Score = 294 (108.6 bits), Expect = 5.8e-51, Sum P(2) = 5.8e-51
Identities = 104/324 (32%), Positives = 161/324 (49%)
Query: 562 GAILVFLPGWEDIN----KTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPG 617
G ILVFL G ++I K D L+ D V +PLH+ + +Q +VF
Sbjct: 237 GDILVFLSGRKEIEYCIKKIEDSLIHAS--EDCQTLVPLPLHAGLTVDEQMRVFNIYDGD 294
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
RK+I STNIAET+ITID +VYV+DSG K++ Y+PY S L + +SK+SA QR+GRA
Sbjct: 295 FRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRA 354
Query: 678 GRCQAGICYHLYSQLRAASL--PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLD 735
GR G + LY++ +A SL +F+ +I + L L +K L NI F +
Sbjct: 355 GRTMRGKVFRLYTE-KAYSLMKEEFEA-DILNCDMSPLVLFLKGLGLK-NILQF-PFFVR 410
Query: 736 PPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKLGCLSVHPLMSKMLFFAILMDCLDPAL 794
PP +V + A+ L +G L +T+ LG ++ + +SK L + C L
Sbjct: 411 PP-TVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEIL 469
Query: 795 TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQE 854
++A + F P S + K A A +S + + D + + FE + K+ Q
Sbjct: 470 SIASILTAGEVFYNPTS-SSKNDAFVAH---SSFFANEGDIITALNVFESFVGNKKDLQ- 524
Query: 855 AWFCSQYFVSSGVMNMLLGMRKQL 878
W C + +++ + L +R L
Sbjct: 525 -W-CRKNYLNYQTLRQALDIRTHL 546
Score = 37 (18.1 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24
Identities = 6/35 (17%), Positives = 20/35 (57%)
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
+++ S ++ ++ N+S ++S W+ K +++
Sbjct: 613 WIMYSSAVESETQIFVKNISKIESFWLDKYYKREK 647
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 375 (137.1 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 117/351 (33%), Positives = 185/351 (52%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL--LANPFFRDTS 591
YL + +++D +I +++ I ++ +G +L FLPG E+I+ L LA R+
Sbjct: 364 YLDAESEDIVD-TMIRSIIQ-INLNEPEGDVLCFLPGQEEIDNCVKSLEQLAPQLPREAP 421
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
V +PL++ + QQ K+F++ P G RK+IL+TNIAET+IT+ V YVIDSG K K +
Sbjct: 422 LIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKVW 481
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+STL ++ +S+ASA+QRAGRAGR G + LY + +LP Q EIKR
Sbjct: 482 KHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMALPKQQESEIKR---N 538
Query: 712 ELCLQVKLLDPNCNIEDFLQKT-LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
++ L V L ++D L + L+ P I +A+ L +GAL+ KVT LG K+
Sbjct: 539 DIILPVLTLK-KLGVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSI 597
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLA-CASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + P +S +L A L P + +A C S D ++ + + + L
Sbjct: 598 LPLPPQLSVVLITAAEFGVLSPVIDIASCLSV--DNLITNVTGEARDEINFKRRQHCPLG 655
Query: 830 GGQSDQLAVIAAFECWKNAKQRGQEAWFCSQY-FVSSGVMNMLLGMRKQLQ 879
D +IA +E ++ + +G+E W C + F G N+ ++ QLQ
Sbjct: 656 NIHGD---LIALYEYFQAYQAQGKE-W-CKELAFSFKGFKNVEK-IKYQLQ 700
Score = 240 (89.5 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 54/159 (33%), Positives = 94/159 (59%)
Query: 234 ETCKIV-CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLL 292
E K++ TQPRR++A S+A R+S E G +G ++GY++R + + + + + T+G+LL
Sbjct: 222 ENPKMIGVTQPRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLL 281
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH--L 350
R ++ S L + S II+DE HER +D ++ ++ ++ S L
Sbjct: 282 REIMLD--SNLTKYST------------IILDEAHERTILTDLIMGFLKQIITSGKRKDL 327
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
++++MSATL+A+ FS +FG P++ + G YPV FYL+
Sbjct: 328 KIVVMSATLNAELFSNFFGNAPILYIEGKMYPVSQFYLD 366
Score = 236 (88.1 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 48/119 (40%), Positives = 78/119 (65%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A +Q+++ R KLPI KD I +++NQV ++ GETG GK+TQ+PQFL+ E
Sbjct: 170 ATAQQLLQIREKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMP------EN 223
Query: 236 CKIV-CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
K++ TQPRR++A S+A R+S E G +G ++GY++R + + + + + T+G+LLR
Sbjct: 224 PKMIGVTQPRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLR 282
Score = 37 (18.1 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
K +N P + T + D+IH +++ F
Sbjct: 28 KNDNNTPVETSEPIPTPVYEDDIHRQNKKFKF 59
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 410 (149.4 bits), Expect = 3.2e-50, Sum P(2) = 3.2e-50
Identities = 123/366 (33%), Positives = 192/366 (52%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKF---VIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVFL G E+I + +L + R SK +++P+++ +PS Q ++F+ PPG
Sbjct: 128 GDILVFLTGQEEIEAACE-MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 186
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK++++TNIAET++TI+ ++YV+D G K+KSY+P + +L + SKASA QRAGRAG
Sbjct: 187 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 246
Query: 679 RCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDP 736
R AG C+ LY+ L + VPEI+R + + L +K L I D + LDP
Sbjct: 247 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSL----GIHDLMHFDFLDP 302
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P T+ A+ L +GAL+ ++T G K+ L V P++SKM+ + C + LT+
Sbjct: 303 PPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTV 362
Query: 797 ACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A + ++ P +K A A+ L GG D L ++ + W + Q
Sbjct: 363 AAMLSVNN--SIFYRPKDKVVHADNARVNFF-LPGG--DHLVLLNVYTQWAESGYSSQ-- 415
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN-ARVPGIIHAVLMAGLY 914
W C + FV M +R+QL+ L + + +SSC + RV + AG +
Sbjct: 416 W-CYENFVQFRSMRRARDVREQLEGLLER---VEVGLSSCQGDYIRV----RKAITAGYF 467
Query: 915 PMVARL 920
ARL
Sbjct: 468 YHTARL 473
Score = 165 (63.1 bits), Expect = 3.2e-50, Sum P(2) = 3.2e-50
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 316 SALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQ 375
S L ++VDE HER ++D + +I+D+ P L++++ SAT+D RFS +F G PV +
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFR 90
Query: 376 VPGFTYPVKSFY 387
+PG +PV FY
Sbjct: 91 IPGRRFPVDIFY 102
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 366 (133.9 bits), Expect = 3.5e-50, Sum P(3) = 3.5e-50
Identities = 84/233 (36%), Positives = 135/233 (57%)
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
S+ ++PL+S++P+ +Q +VF+ PP G R ++L+TN+AET++TI + YV DSGR KE+
Sbjct: 673 SRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKERK 732
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIP 709
YD V + + W+SKASA QR GRAGR G C+ LYS + L +F +PE+ R
Sbjct: 733 YDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEFALPELLRTS 792
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+E + LQ+K ++ ++ +F T PP ++ + +L+ I A+S + +VT++G +
Sbjct: 793 LEGVVLQLKSMNLQ-HVVNFPFPT--PPERDSLVKSEKLLKYISAVSEEGRVTQVGYTMS 849
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
+ P S++L DCL +TL A + F I N+ AAK
Sbjct: 850 IFPLSPRFSRILLLGHQHDCLHYTVTLVAALSAAEIF---IPENQAIPQLAAK 899
Score = 255 (94.8 bits), Expect = 3.5e-50, Sum P(3) = 3.5e-50
Identities = 71/221 (32%), Positives = 121/221 (54%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK-- 237
+I R LP+ S + I + +N +V++ G TG GKTTQ+PQFL E + ++
Sbjct: 349 EIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPG 408
Query: 238 -IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I TQPRR++A S+++R++ E G++ +GY+IR E K +++ F T+GVLLR V
Sbjct: 409 MIGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLRE-V 466
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML----------PS 346
+Q ++ K ++ I+VDE HER +D ++ ++ ++ P+
Sbjct: 467 AQDLALRKYSA-------------IVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPT 513
Query: 347 YPHLRLILMSATLDADRFSQ----YFGGCPVIQVPGFTYPV 383
L+L++MSATL + ++ + PV++V G YPV
Sbjct: 514 VKPLKLVIMSATLRIEDLTENKNLFATPPPVLEVEGRQYPV 554
Score = 47 (21.6 bits), Expect = 3.5e-50, Sum P(3) = 3.5e-50
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 548 IEQLLRKICMDSED---GAILVFLPGWEDINKTRDRL 581
+E+ RKI + G +LVFL G +I + RL
Sbjct: 567 VEEAFRKISRGHKKLPPGGMLVFLTGQNEITQLSKRL 603
Score = 46 (21.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 512 QIIKKHMENALSD--SMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAI 564
++++ +E + SM Q + + PE LV E+LL+ I SE+G +
Sbjct: 787 ELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLLKYISAVSEEGRV 841
Score = 37 (18.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 5/29 (17%), Positives = 17/29 (58%)
Query: 1104 LSYDGFSGISLPAESVESLTSMIQATEID 1132
L ++G + ++ P + + + ++A ++D
Sbjct: 605 LQFNGVTSVNAPQVRISTQDAPMEAEDVD 633
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 335 (123.0 bits), Expect = 4.8e-50, Sum P(3) = 4.8e-50
Identities = 87/228 (38%), Positives = 129/228 (56%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
+ S+ + +K +L +I LPIS I++ +D+NQVV+I+GETG GKTTQ+P+
Sbjct: 77 LRSIQDKQQKIRSLPKITYPEG-LPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKI 135
Query: 225 LLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
LE +G I TQPRRI+A +VA RI+ E G +G+ +GYK+R + + S I
Sbjct: 136 CLE--LGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIK 193
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
T+G+LL + RL K D II+DE HER DF+L ++ +L
Sbjct: 194 LMTDGILLAEMQRD---RLL------LKYDT-----IIIDEAHERSLNIDFILGYLKQIL 239
Query: 345 PSYPHLRLILMSATLDADRFSQYFGG-----CPVIQVPGFTYPVKSFY 387
P L+LI+ SAT+D RF+++F P+I+V G T+PV+ Y
Sbjct: 240 IKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRY 287
Score = 294 (108.6 bits), Expect = 4.8e-50, Sum P(3) = 4.8e-50
Identities = 94/302 (31%), Positives = 156/302 (51%)
Query: 539 NPELIDLVLIEQLLRKI--CMDSEDGAILVFLPGWEDINKTRDRLL-ANPFFRDTSKFVI 595
+P+ +D+ I +L + D +G ILVFL G +I T L+ AN R T+ +
Sbjct: 302 SPQEVDI--ISGILSAVDELSDCGNGDILVFLNGEREIRDTAAALVKAN--LRHTN---V 354
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
+PL++ + +Q ++FK P G R I+L+TN+AET++T+ + YVID G + Y
Sbjct: 355 LPLYARLTVSEQNQIFK-PHSG-RNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRT 412
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
V L VS+ASA QR+GR GR GIC LYS+ S +F PEI R + + L
Sbjct: 413 KVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSRAEFTDPEILRTNLATVIL 472
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL-SLDE--------------K 760
Q+ LD +I +F ++ P + I + + +L++I A+ S++ +
Sbjct: 473 QMHALDLG-DIANF--PFVEAPDNRNITDGVRLLEEIAAVESIENADKNAKGKASSTATQ 529
Query: 761 VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATA 820
+T+ G L + P ++KM+ +I C++ L + A +DP P+EK++ +
Sbjct: 530 LTKSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQDPRE---RPHEKQQLSD 586
Query: 821 AK 822
K
Sbjct: 587 EK 588
Score = 42 (19.8 bits), Expect = 4.8e-50, Sum P(3) = 4.8e-50
Identities = 20/87 (22%), Positives = 37/87 (42%)
Query: 814 EKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLG 873
EKK+ FE +LYG L++++ + N E C + F+ ++N
Sbjct: 780 EKKQGAVMAFEQVTLYG-----LSIVSKRKINFNVI----EPVTCREIFIREALVNGDCV 830
Query: 874 MRKQLQTELIKNGFIPEDVSSCSHNAR 900
++++ L KN + E + AR
Sbjct: 831 IKEKF---LSKNQQLVESIEELEQKAR 854
>UNIPROTKB|I3LRU8 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000027576 Uniprot:I3LRU8
Length = 439
Score = 531 (192.0 bits), Expect = 5.5e-50, P = 5.5e-50
Identities = 116/279 (41%), Positives = 179/279 (64%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ ++ + R K +D + + + E + + + L +K +LR I +
Sbjct: 146 ENQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDVTLDQQLLEDLQKKKTDLRYIEMQ 205
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 206 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 265
Query: 241 TQPRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 266 TQPRRISAISVAERVAAERAETCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 325
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P +S+++HI++DEIHER+ SD ++ +I+D+L P L+++LMSA
Sbjct: 326 D-----------P---HLSSVSHILLDEIHERNLQSDVLMTVIKDLLSYRPDLKVVLMSA 371
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 372 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 410
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 385 (140.6 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 107/343 (31%), Positives = 168/343 (48%)
Query: 606 QQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 665
QQ+++F PPPG RK ++STNI+ T++TID + YV+D G +K+ +++P + L+ +
Sbjct: 278 QQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPI 337
Query: 666 SKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
SK+ A QR+GRAGR +G C+ +YS+ +PD +PEIKR + + L +K L
Sbjct: 338 SKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLA--- 394
Query: 725 NIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
I D ++ LDPP I A+ L A+ VT LG + + P ++ +
Sbjct: 395 -IHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIK 453
Query: 784 AILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFE 843
A +DC D L +A + F P+ P +K A ELA+ GG +D + FE
Sbjct: 454 AASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFE 513
Query: 844 CWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG 903
K G A +C ++++ + + QL+ ELI+ D +
Sbjct: 514 ---QCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLR-ELIRKLKQQSDFPKETFEGPKHE 569
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAG-GAKVRLHPHS 945
++ L AG + VAR GR F G G+ V +HP S
Sbjct: 570 VLRRCLCAGYFKNVAR----RSVGRTFCTMDGRGSPVHIHPSS 608
Score = 217 (81.4 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 46/149 (30%), Positives = 87/149 (58%)
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPR+++A SVA+R++ E +G +GY++R + K ++I + T+G LL+ ++
Sbjct: 5 TQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGD-- 62
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML----PSYP-HLRLILM 355
P +++ + II+DE HER +D + +++ + P+ HL++++M
Sbjct: 63 ---------P---NLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVM 110
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVK 384
SAT++ + S +FG CP+ +PG YPV+
Sbjct: 111 SATMELAKLSAFFGNCPIFDIPGRLYPVR 139
Score = 50 (22.7 bits), Expect = 3.5e-32, Sum P(3) = 3.5e-32
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 414 DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPN 452
DP LT+ + LDEA + D LL+ + E SPN
Sbjct: 62 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPN 100
Score = 45 (20.9 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMD---SE-DGAILVFLPGWEDINKTRDRL 581
+K+ + P + Q + K+ MD +E G ILVFL G +I K+ + L
Sbjct: 140 EKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 193
Score = 38 (18.4 bits), Expect = 7.8e-49, Sum P(3) = 7.8e-49
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 457 QHTLTGLT 464
QH+LTGLT
Sbjct: 247 QHSLTGLT 254
Score = 37 (18.1 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 382 PVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPE---LTEENKSTLDEAIS 430
P++ ++ D+L L ++ L S + ED +EN L + IS
Sbjct: 638 PIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNKENVKQLKDGIS 689
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 361 (132.1 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
Identities = 83/230 (36%), Positives = 133/230 (57%)
Query: 572 EDINKTRDRLLANPFFRDTSK-FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
EDI++ ++ + D S+ ++PL+S++ + Q KVF P G R I++TN+AET
Sbjct: 680 EDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAET 739
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI ++ YV+D G+ KE+ Y+ +V + W+SKA+A QRAGRAGR G CY LYS
Sbjct: 740 SITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYS 799
Query: 691 Q-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVL 749
+ +S P +PEI R P+E + LQ+K ++ + NI +F T P + ++ +L
Sbjct: 800 SAVFDSSFPLHSLPEILRTPVESIVLQMKNMNID-NIANFPFPT--SPGRSRLEKSLKLL 856
Query: 750 QDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++GA+ + +T+LGE++ + P SKML CL + L A
Sbjct: 857 SNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSA 906
Score = 258 (95.9 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
Identities = 93/281 (33%), Positives = 140/281 (49%)
Query: 125 DGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANL---R-- 179
D P K+D N +D R +R+ K KM + ++ + + + K R
Sbjct: 335 DVAPDNKID-NPD--ADMVRAQRMPR--KLKMREEDVEPTADDIEIKGRKTTYTIINRPP 389
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK-- 237
+I E R LPI + + I + +N VV+I G TG GKTTQ+PQFL E +S E+
Sbjct: 390 EIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPG 449
Query: 238 -IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I TQPRR++A S+A+R+S E + Y+IR +S ++I F T+G+LLR L
Sbjct: 450 MIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELS 508
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII-------RDMLPS--- 346
S + ++A + +IVDE HER +D +L ++ R+M S
Sbjct: 509 SDFL--------------LTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQK 554
Query: 347 YPHLRLILMSATLDADRFSQ---YFG-GCPVIQVPGFTYPV 383
L+LI+MSATL FS+ F P+I++ YPV
Sbjct: 555 VKPLKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPV 595
Score = 60 (26.2 bits), Expect = 1.5e-28, Sum P(4) = 1.5e-28
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 132 LDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESL------TSRIEKDANLRQIVEER 185
L N+ S K + KR+D + + K+ K E+A + L TS + NL + +
Sbjct: 77 LKENEGSISSKKK-KRLDKYIENKLKKEEVASLIAKLAEERIDTSLLSSSKNLGKQATAK 135
Query: 186 SKLPISSFKDVI---TSTVDSNQVVLISGETGCGKTT 219
KL S ++ + S DS ++ ET K++
Sbjct: 136 EKLKKSLLEEKLGLPLSDADSRLYKVVDVETTTTKSS 172
Score = 51 (23.0 bits), Expect = 6.2e-17, Sum P(3) = 6.2e-17
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
++F + L PP SV I+ + Q I + +D+ EK G +++ P S+++ F
Sbjct: 1023 KEFFKLQLKPPTSVQIK---ALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQF 1076
Score = 49 (22.3 bits), Expect = 8.5e-28, Sum P(3) = 8.5e-28
Identities = 10/45 (22%), Positives = 25/45 (55%)
Query: 504 QENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLI 548
+EN+ ++ KK ++ + + +K++ + +A + E ID L+
Sbjct: 78 KENEGSISSKKKKRLDKYIENKLKKEEVASLIAKLAEERIDTSLL 122
Score = 43 (20.2 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 548 IEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFFR 588
++ K+C+ + G+ILVFL G +++ + ++L F R
Sbjct: 608 LQDAFDKVCLIHKRLPAGSILVFLTGQQEVEQLC-QMLRKRFVR 650
Score = 41 (19.5 bits), Expect = 1.5e-28, Sum P(4) = 1.5e-28
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 397 SAESNHLDSASLIVPNEDPELTEENKST 424
SAE ++L + S + +EENK T
Sbjct: 230 SAEEDYLSTDSEEFSEDSDNSSEENKDT 257
Score = 39 (18.8 bits), Expect = 4.0e-28, Sum P(4) = 4.0e-28
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 539 NPELIDLVLIEQLLRKICMDSED 561
NP+ D+V +++ RK+ M ED
Sbjct: 344 NPDA-DMVRAQRMPRKLKMREED 365
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 410 (149.4 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 123/366 (33%), Positives = 192/366 (52%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKF---VIIPLHSMVPSVQQKKVFKRPPPGC 618
G ILVFL G E+I + +L + R SK +++P+++ +PS Q ++F+ PPG
Sbjct: 128 GDILVFLTGQEEIEAACE-MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 186
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK++++TNIAET++TI+ ++YV+D G K+KSY+P + +L + SKASA QRAGRAG
Sbjct: 187 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 246
Query: 679 RCQAGICYHLYSQLRAA-SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDP 736
R AG C+ LY+ L + VPEI+R + + L +K L I D + LDP
Sbjct: 247 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSL----GIHDLMHFDFLDP 302
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P T+ A+ L +GAL+ ++T G K+ L V P++SKM+ + C + LT+
Sbjct: 303 PPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTV 362
Query: 797 ACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
A + ++ P +K A A+ L GG D L ++ + W + Q
Sbjct: 363 AAMLSVNN--SIFYRPKDKVVHADNARVNFF-LPGG--DHLVLLNVYTQWAESGYSSQ-- 415
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN-ARVPGIIHAVLMAGLY 914
W C + FV M +R+QL+ L + + +SSC + RV + AG +
Sbjct: 416 W-CYENFVQFRSMRRARDVREQLEGLLER---VEVGLSSCQGDYIRV----RKAITAGYF 467
Query: 915 PMVARL 920
ARL
Sbjct: 468 YHTARL 473
Score = 158 (60.7 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 316 SALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQ 375
S L ++VDE HER ++D + +I+D+ P L++++ SAT+D RFS +F PV +
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFR 90
Query: 376 VPGFTYPVKSFY 387
+PG +PV FY
Sbjct: 91 IPGRRFPVDIFY 102
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 392 (143.0 bits), Expect = 8.5e-49, Sum P(2) = 8.5e-49
Identities = 120/398 (30%), Positives = 192/398 (48%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFR--DTS--KFVIIPLHSMVPSVQQKKVFKRPPPG 617
G ILVFL G E + + L N + D S K ++PL + +P Q++VF PP
Sbjct: 403 GDILVFLTGQETVEALEN--LVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPR 460
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
RKIIL+TNIAET++T+ V YV+D G+ K K + + +L +SK++A QR GRA
Sbjct: 461 TRKIILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRA 520
Query: 678 GRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
GR G CY LY++ +L + PEI R + + L +K + N+ +F L P
Sbjct: 521 GREAPGQCYRLYTEKDYLALDEVNTPEILRCDLSQAILNMKARGVD-NVIEF--PFLTRP 577
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILM--DCLDPALT 795
+ A++ L I AL K++E G + L + P + ++L A DCL +
Sbjct: 578 PREALEKALLQLLSIEALDETGKISETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVID 637
Query: 796 LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
+ + F S +K+ A AA+ +L Y + D L ++A + + + ++A
Sbjct: 638 IISCLSVENIFLNTTSEEKKEAAEAARRDL---YRREGDHLTMLATVRAYAS-ENTDRKA 693
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP---EDVSSCSHNARVPGIIHAV--LM 910
W ++ VS M ++ +RKQL + + +P E S S + R P + + +
Sbjct: 694 W-AERHLVSHRAMQSVMDVRKQLTAQCRQAKLLPSPTESRDSDSSSIREPSPVFILKSFL 752
Query: 911 AGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
G ARL P +G + G V +HP S+ F
Sbjct: 753 RGFATNTARLVP---DGS-YRTVVGNQTVAIHPSSVLF 786
Score = 205 (77.2 bits), Expect = 8.5e-49, Sum P(2) = 8.5e-49
Identities = 70/224 (31%), Positives = 114/224 (50%)
Query: 169 TSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH 228
T+ ++K A + + E R LPI + D I + N V+L+ GETG GK+TQ+PQFL++
Sbjct: 130 TASLKKKAQM--LYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDE 187
Query: 229 IWSKGETCKIV-------------C---TQPRRISATSVAERISVERGENIGDNIGYKIR 272
W + IV C TQPRR++A S+A R++ E G +G +
Sbjct: 188 SWCRPTKTTIVQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSSSP---- 243
Query: 273 LESKGGKHSSIVFCTN-GVLLRL-LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
SK G S+ F T+ R+ +++G+ L+E + P SA I+VDE+HER
Sbjct: 244 -ASKVGY--SVRFDTSVSPSTRVKFLTEGML-LQEMLHDPWLTKYSA---IVVDEVHERG 296
Query: 331 RYSDFMLAIIRDMLPSYPH------LRLILMSATLDADRFSQYF 368
D ++ +R+++ L+ ++MSAT D + ++F
Sbjct: 297 VNVDLVMGFLRNLVSGKREGRGGVPLKAVVMSATADMESLQEFF 340
Score = 91 (37.1 bits), Expect = 8.0e-37, Sum P(2) = 8.0e-37
Identities = 39/166 (23%), Positives = 71/166 (42%)
Query: 238 IVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGKHSSIVFCTNGVLL 292
I TQPRR++A S+A R++ E G +G + +GY +R ++ + + F T G+LL
Sbjct: 213 IAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSVSPSTRVKFLTEGMLL 272
Query: 293 R-LLVSQGVSR-----LKEASNKPAKDD-VSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
+ +L +++ + E + D V +V E R + A++
Sbjct: 273 QEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKRE-GRGGVPLKAVVMSATA 331
Query: 346 SYPHLRLILMSA----TLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
L+ + L + S+ G V + G +PVK+ Y
Sbjct: 332 DMESLQEFFVEGYKARELQKEEKSEK-DGIAVCHIKGRQFPVKTIY 376
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 351 (128.6 bits), Expect = 1.7e-48, Sum P(3) = 1.7e-48
Identities = 92/252 (36%), Positives = 133/252 (52%)
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PL+S++ +Q +VF+ PP G R +++TN+AET++TI + YV+D G++K++ YD
Sbjct: 588 VLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRV 647
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
VS+ + +WVS+ASA QRAGRAGR + G CY LYS + PEI R P+E+L
Sbjct: 648 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPPPEITRRPVEDLI 707
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSV-TIRNAIIVLQDIGALSLDEK------------- 760
LQ+K L NIE + P SV + A +L +GAL K
Sbjct: 708 LQMKAL----NIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLS 763
Query: 761 --VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
+TELG + V P +KML + CL +T+ A R+ F E R
Sbjct: 764 CPITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELF------EELDRP 817
Query: 819 TAAKFELASLYG 830
A+ ELA L G
Sbjct: 818 AASDEELARLKG 829
Score = 260 (96.6 bits), Expect = 1.7e-48, Sum P(3) = 1.7e-48
Identities = 76/213 (35%), Positives = 118/213 (55%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIV 239
++ EER KLPI S + VI V + +V+I GETG GKTTQVPQFL E +S + I
Sbjct: 242 EMQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSV-IG 300
Query: 240 CTQPRRISATSVAERISVERGENIGDNI-GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
T+PRR++A ++++R++ E N+ + Y+IR E + + I F T+GVLL+ + +
Sbjct: 301 VTEPRRVAAVAMSQRVAKEM--NLSPRVVSYQIRYEGNVTEETRIKFMTDGVLLKE-IQK 357
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM--LPSYPHL--RLIL 354
LK +I+DE HER Y+D ++ ++ + L HL +L++
Sbjct: 358 DFLLLKYKV-------------VIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLI 404
Query: 355 MSATLDADRFSQ----YFGGCPVIQVPGFTYPV 383
MSATL + F+Q + PVI+V +PV
Sbjct: 405 MSATLRVEDFTQNQRLFTQPPPVIKVESRQFPV 437
Score = 49 (22.3 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 117 LFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMS 157
L H PP+ + + ++ + K + R K+ P++S
Sbjct: 493 LTRHRPPEKDDQRDSVEETRRFKKSRARAKKAQAMTLPQIS 533
Score = 41 (19.5 bits), Expect = 1.7e-48, Sum P(3) = 1.7e-48
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 550 QLLRKICMDSE---DGAILVFLPGWEDINKTRDRL 581
+ RK+C G ILVFL G +++ RL
Sbjct: 453 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRL 487
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 380 (138.8 bits), Expect = 2.2e-48, Sum P(4) = 2.2e-48
Identities = 90/239 (37%), Positives = 135/239 (56%)
Query: 570 GWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAE 629
G EDI D A P F ++PL+S +P+ +Q +VF+ PP G R ++++TN+AE
Sbjct: 830 GKEDIITEDDEKPAGPLF-------VLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAE 882
Query: 630 TAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY 689
T++TI ++ YV+D+GR+K++ Y+ N +S+ + W SKASA QRAGRAGR G CY +Y
Sbjct: 883 TSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIY 942
Query: 690 SQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIV 748
S + F PEI IPI+ + LQ+K + I F T PP +++ A+
Sbjct: 943 SSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQ-KITGFPFPT--PPDESSLKLALRT 999
Query: 749 LQDIGALSLDE-KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPF 806
L ++GAL + +TELG K+ V P SKML +CL + + +DPF
Sbjct: 1000 LINLGALEVKTFSITELGMKMSQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTVKDPF 1058
Score = 231 (86.4 bits), Expect = 2.2e-48, Sum P(4) = 2.2e-48
Identities = 88/312 (28%), Positives = 155/312 (49%)
Query: 72 SKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEK 131
+K++ KQ + K +++V+ ++ +E + E + V ++ Y G++
Sbjct: 294 TKTNENKKQNKKQKNKVEEKVKEEEEEEEIKKEELEEIANQVNSEI-DRYNYSIEVFGKE 352
Query: 132 LDANQSR-KSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPI 190
+ N+ S KT + ++ ++ I V ++ ++E+ + + R LPI
Sbjct: 353 EEENREVFLSTKTGIETIEDAMSEEVDAKPIEYNVFNV--KVERKPEIDAV---RDNLPI 407
Query: 191 SSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS---KGETCKIV-CTQPRRI 246
+ I + N VV+I GETG GKTTQVPQFL E + G+ I+ TQPRR+
Sbjct: 408 MLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGVTQPRRV 467
Query: 247 SATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLR-----LLVSQGV 300
+A S A+R++ E G +GY+IR + K + I F T+G+L+R L+SQ
Sbjct: 468 AAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDFLLSQYS 527
Query: 301 SRL-KEASNKPAKDDV--SALTHIIV--DEIHERDRYSDFMLAIIR-DMLPSYPHLRLIL 354
S L EA + D+ L+ I+ +++ + ++ I DM+ YP L+L++
Sbjct: 528 SILIDEAHERNLNTDILIGLLSRIVPLRKKLYLKSLATNKANGTIGVDMI--YP-LKLVV 584
Query: 355 MSATLDADRFSQ 366
MSATL + F++
Sbjct: 585 MSATLRVEDFTK 596
Score = 53 (23.7 bits), Expect = 2.2e-48, Sum P(4) = 2.2e-48
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 836 LAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
L V+ A++ ++ K FCSQ F+++ M+ + +R QL TE++ +
Sbjct: 1124 LKVVGAYD-YQIRKSPKDIDHFCSQNFLNTKSMSEIHKLRHQL-TEIVNS 1171
Score = 38 (18.4 bits), Expect = 2.2e-48, Sum P(4) = 2.2e-48
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 554 KICMDSEDGAILVFLPGWEDI 574
KI + G ILVF+ G ++I
Sbjct: 640 KIHKNLPSGGILVFVTGKQEI 660
Score = 38 (18.4 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 507 QPEVAQIIKKHMENALSDSMKQQ 529
QPE Q +K +E + +D+ K++
Sbjct: 240 QPETEQKKRKTIEQSENDTKKKK 262
Score = 38 (18.4 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 606 QQKKVFKRPPP 616
+ K +F RPPP
Sbjct: 596 KNKTLFSRPPP 606
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 351 (128.6 bits), Expect = 4.4e-48, Sum P(3) = 4.4e-48
Identities = 92/252 (36%), Positives = 132/252 (52%)
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PL+S++ +Q +VFK PP G R +++TN+AET++TI + YV+D G++K++ YD
Sbjct: 583 VLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 642
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
VS+ + +WVS+ASA QRAGRAGR + G CY LYS F PEI R P+E+L
Sbjct: 643 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLI 702
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSV-TIRNAIIVLQDIGALSLDEK------------- 760
LQ+K L NIE + P SV + A +L +GAL K
Sbjct: 703 LQMKAL----NIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLS 758
Query: 761 --VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
+T LG + V P +KML + CL + + A R+ F E R
Sbjct: 759 CPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELF------EELDRP 812
Query: 819 TAAKFELASLYG 830
A++ ELA L G
Sbjct: 813 AASEEELAELKG 824
Score = 256 (95.2 bits), Expect = 4.4e-48, Sum P(3) = 4.4e-48
Identities = 74/213 (34%), Positives = 119/213 (55%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIV 239
++ EER KLPI + + I V + +V++ GETG GKTTQVPQFL E +S ++ I
Sbjct: 240 EMQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSI-IG 298
Query: 240 CTQPRRISATSVAERISVERGENIGDNI-GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
T+PRR++A ++++R++ E N+ + Y+IR E + + I F T+GVLL+ + +
Sbjct: 299 VTEPRRVAAVAMSQRVAKEM--NLSHRVVSYQIRYEGNVTEETRIKFMTDGVLLKE-IQK 355
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM--LPSYPHL--RLIL 354
LK +I+DE HER Y+D +L ++ + L + HL +L++
Sbjct: 356 DFLLLKYKV-------------VIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLI 402
Query: 355 MSATLDADRFSQ----YFGGCPVIQVPGFTYPV 383
MSATL + F+Q + PVI+V +PV
Sbjct: 403 MSATLRVEDFTQNQRLFTTPPPVIKVESRQFPV 435
Score = 41 (19.5 bits), Expect = 4.4e-48, Sum P(3) = 4.4e-48
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 550 QLLRKICMDSE---DGAILVFLPGWEDINKTRDRL 581
+ RK+C G ILVFL G +++ RL
Sbjct: 451 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRL 485
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 346 (126.9 bits), Expect = 9.6e-48, Sum P(3) = 9.6e-48
Identities = 84/228 (36%), Positives = 125/228 (54%)
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PL+S++ +Q +VFK PP G R +++TN+AET++TI + YV+D G++K++ YD
Sbjct: 377 VLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 436
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
VS+ + +WVS+ASA QRAGRAGR + G CY LYS F PEI R P+E+L
Sbjct: 437 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLI 496
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSV-TIRNAIIVLQDIGALSLDEK------------- 760
LQ+K L N+E + P SV + A +L +GAL +K
Sbjct: 497 LQMKAL----NVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLS 552
Query: 761 --VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPF 806
+T LG + V P +KML + CL A+T+ + R+ F
Sbjct: 553 CPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 600
Score = 254 (94.5 bits), Expect = 9.6e-48, Sum P(3) = 9.6e-48
Identities = 74/215 (34%), Positives = 120/215 (55%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIV 239
++ EER KLPI S + VI V + +V++ GETG GKTTQVPQFL E +S ++ I
Sbjct: 31 EMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSI-IG 89
Query: 240 CTQPRRISATSVAERISVERGENIGDNI-GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
T+PRR++A ++++R++ E N+ + Y+IR E + + I F T+GVLL+ +
Sbjct: 90 VTEPRRVAAVAMSQRVAKEM--NLSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKD 147
Query: 299 GVS-RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP-----SYPHLRL 352
+ R K +I+DE HER Y+D ++ ++ ++ + P L+L
Sbjct: 148 FLLLRYKV---------------VIIDEAHERSVYTDILIGLLSRIVTLRAKRNLP-LKL 191
Query: 353 ILMSATLDADRFSQ----YFGGCPVIQVPGFTYPV 383
++MSATL + F+Q + PVI+V +PV
Sbjct: 192 LIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPV 226
Score = 41 (19.5 bits), Expect = 9.6e-48, Sum P(3) = 9.6e-48
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 550 QLLRKICMDSE---DGAILVFLPGWEDINKTRDRL 581
+ RK+C G ILVFL G +++ RL
Sbjct: 242 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRL 276
Score = 41 (19.5 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 19/81 (23%), Positives = 34/81 (41%)
Query: 85 VCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTR 144
VCK + + G IL LT + + L +PP P EK D + + +
Sbjct: 247 VCKIHRMLPAG-G--ILVFLTGQAEVHALCRRLRKAFPPSRARPQEKDDDQKDSVEEMRK 303
Query: 145 GKRVDIFCKPKMSKAEIAMKV 165
K+ + K ++AE+ ++
Sbjct: 304 FKKSR--ARAKKARAEVLPQI 322
WARNING: HSPs involving 62 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1225 1183 0.00095 123 3 11 22 0.40 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 312
No. of states in DFA: 628 (67 KB)
Total size of DFA: 504 KB (2234 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 106.61u 0.11s 106.72t Elapsed: 00:00:05
Total cpu time: 106.72u 0.11s 106.83t Elapsed: 00:00:05
Start: Mon May 20 19:19:58 2013 End: Mon May 20 19:20:03 2013
WARNINGS ISSUED: 2