BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000916
(1225 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224085415|ref|XP_002307569.1| predicted protein [Populus trichocarpa]
gi|222857018|gb|EEE94565.1| predicted protein [Populus trichocarpa]
Length = 1195
Score = 1776 bits (4600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 883/1226 (72%), Positives = 1015/1226 (82%), Gaps = 38/1226 (3%)
Query: 1 MGKKKQKKAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAV 60
MGKK Q+KA QQQ+P VAEAT IRIS+IL+ F A+ D+VYTF+ANLSN +RAV
Sbjct: 1 MGKKNQRKA-------AQQQNPRVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAV 53
Query: 61 VHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTH 120
VHEVCKKMGM SKSSGRG QRRVSV K+ K+++ KGKE L LTFS SK+VL +LF++
Sbjct: 54 VHEVCKKMGMKSKSSGRGGQRRVSVYKNTKKLDDVKGKENLTHLTFSGESKMVLGELFSN 113
Query: 121 YPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ 180
YPP++G G +L+ S + KTR K+ DIF KP KAEIA KVES SRIEKD L+Q
Sbjct: 114 YPPEEGGFGAELEGKHSGTAGKTREKKDDIFSKPSRKKAEIAKKVESFASRIEKDVKLKQ 173
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
IVE RSKLPI+SF DVITST++S+QVVLISGETGCGKTTQVPQFLL+H+W KGE CKIVC
Sbjct: 174 IVEGRSKLPIASFMDVITSTIESHQVVLISGETGCGKTTQVPQFLLDHMWGKGEACKIVC 233
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRRISA SV+ERIS ERGEN+GD++GYKIRLESKGGKHSSIVFCTNGVLLR+LVS+G+
Sbjct: 234 TQPRRISAISVSERISYERGENVGDSVGYKIRLESKGGKHSSIVFCTNGVLLRILVSKGI 293
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
+ + +N AK++ DEIHERDR+SDFMLAIIRD+LPS+ HLRLILMSATLD
Sbjct: 294 TGSQNEANTAAKEN---------DEIHERDRFSDFMLAIIRDILPSHSHLRLILMSATLD 344
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A+RFSQYFGGCP+I+VPGFTYPVK+F+LEDVLSIL S + NHLDSA V +E ELTEE
Sbjct: 345 AERFSQYFGGCPIIRVPGFTYPVKAFHLEDVLSILNSRDDNHLDSAMPNVLDEGHELTEE 404
Query: 421 NKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCM 480
+K+ LDEAI+LAWSNDEFD LL+LVS EG+P VY+YQH+++GLTPLMV AGKGRVGDVCM
Sbjct: 405 DKAALDEAINLAWSNDEFDSLLDLVSSEGTPKVYDYQHSVSGLTPLMVFAGKGRVGDVCM 464
Query: 481 LLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSM-KQQLLDKYLATVN 539
LLSLGA+C L++K G TAL+ E+ENQ E A++I+KH +NAL+DS +QQLLDKY+AT+N
Sbjct: 465 LLSLGANCNLQSKCGLTALKWAERENQEEAAEVIRKHAQNALADSSEQQQLLDKYMATIN 524
Query: 540 PELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH 599
PELID+VLIEQL++KIC+DS+DGAILVFLPGW+DIN+TR+RLLANPFF+D SKF+II LH
Sbjct: 525 PELIDVVLIEQLIKKICVDSKDGAILVFLPGWDDINRTRERLLANPFFKDGSKFIIISLH 584
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
SMVPSV+QKKVFKRPP GCRKIILSTNI+E+AITIDDVVYVIDSGRMKEKSYDPYNNVST
Sbjct: 585 SMVPSVEQKKVFKRPPQGCRKIILSTNISESAITIDDVVYVIDSGRMKEKSYDPYNNVST 644
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
LQSSWVSKASAKQR GRAGRCQ GICYHLYS+LR +SLPDFQVPEIKR+PIEELCLQVKL
Sbjct: 645 LQSSWVSKASAKQREGRAGRCQPGICYHLYSKLRESSLPDFQVPEIKRMPIEELCLQVKL 704
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
LDP+C IE FLQKTLDPPV TIRNA+ VL DIGALS+DE +TELGEK+GCL VHPL SK
Sbjct: 705 LDPHCKIEAFLQKTLDPPVPETIRNAVAVLLDIGALSVDETLTELGEKIGCLPVHPLTSK 764
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
M+FFAILM+CLDPALTLACASDYRDPFTLP+ PNEKKRA AAKFELASLYGG SDQLAV+
Sbjct: 765 MIFFAILMNCLDPALTLACASDYRDPFTLPMLPNEKKRAAAAKFELASLYGGHSDQLAVL 824
Query: 840 AAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNA 899
AAFECW NAK RGQEA FCSQYF+SS MNML MRKQLQ ELI+ GFIPE+VSSC+ NA
Sbjct: 825 AAFECWNNAKNRGQEASFCSQYFISSSTMNMLQAMRKQLQRELIRKGFIPENVSSCNTNA 884
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP 959
VPGI+HAVL+AGLYPMV R PP KNG+R VET GAKVRLHP SLNFKLSF K++D P
Sbjct: 885 HVPGIVHAVLVAGLYPMVGRFLPP-KNGKRVVETTSGAKVRLHPQSLNFKLSFWKSNDYP 943
Query: 960 LMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENE 1019
L++YDEITRGDGGMH+RNCTV+GPLPLLLLATEI VAPA ++++DDE+DD D AD E
Sbjct: 944 LVIYDEITRGDGGMHIRNCTVIGPLPLLLLATEIVVAPAENDDEDDEEDDDDYDSADGAE 1003
Query: 1020 SDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAIL 1079
SDED MEI K Q GE +MSSPD SV VVVDRWLYFG+TALD+AQIYCLRE+LS AIL
Sbjct: 1004 SDEDGMEIHGKLGTQQGERIMSSPDNSVMVVVDRWLYFGATALDVAQIYCLREQLSAAIL 1063
Query: 1080 FKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARN 1139
FKVTHP K LPP L A Y A ILS DG SGISLP ESVESLTSM+ ATEID+ + R
Sbjct: 1064 FKVTHPHKELPPALAAYTYTTACILSNDGLSGISLPGESVESLTSMVHATEIDESCSGR- 1122
Query: 1140 RGTGQNPSNFLMSLMSPNTRQYFPLRDHKSRIPAHKGSTKGNQLSTQVAQPPLFHGSPVV 1199
RG QNP++FL SL + NT+Q P R H +R P Q P GS
Sbjct: 1123 RGISQNPNSFLSSLKN-NTQQTAP-RYHNARSP---------------NQRPTLQGS--T 1163
Query: 1200 GSGSGTHIPPGPRGDSFKRPRGNWSK 1225
+G P GPRGDS+KR RGN ++
Sbjct: 1164 SAGHSMQGPSGPRGDSYKRQRGNATR 1189
>gi|255558742|ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1229
Score = 1762 bits (4563), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 871/1237 (70%), Positives = 1019/1237 (82%), Gaps = 22/1237 (1%)
Query: 1 MGKKKQKKAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAV 60
MGKK+QKKAEQ +P VAEATRIRISQIL+ F A+KD+V+TF+ANLSNRERAV
Sbjct: 1 MGKKRQKKAEQG--------NPNVAEATRIRISQILEQFRAAKDQVFTFEANLSNRERAV 52
Query: 61 VHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTH 120
VHEVCKK+GM SKS+GRG QRRVS+ K ++ +T GKE L +LTFSE SKLVLQ+LF +
Sbjct: 53 VHEVCKKLGMKSKSTGRGHQRRVSIYKIIQKADTGNGKESLTNLTFSEESKLVLQELFAY 112
Query: 121 YPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ 180
YPP+DGE G K+ N K +GK+ IF P M+KA+I KVESL SRIEKDANLRQ
Sbjct: 113 YPPEDGELGAKIVGNCKAKDSIIQGKKDGIFSMPSMAKADITKKVESLNSRIEKDANLRQ 172
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
IVE+RSKLPI+SF+DVITSTV+S+Q+VLISGETGCGKTTQVPQ+LLE+ W K E CKI+C
Sbjct: 173 IVEQRSKLPIASFRDVITSTVESHQIVLISGETGCGKTTQVPQYLLEYKWGKCEACKIIC 232
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRRISA SVAERIS ERGEN+GD+IGYKIRLESKGGK+SSIV CTNGVLLRLLVS+G
Sbjct: 233 TQPRRISAISVAERISSERGENVGDDIGYKIRLESKGGKNSSIVLCTNGVLLRLLVSRGT 292
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
R K+ S+K AKDD+S +THIIVDEIHERDRYSDF+LAIIRD+LPSYPHLRLILMSATLD
Sbjct: 293 RRSKKKSSKNAKDDISNITHIIVDEIHERDRYSDFILAIIRDILPSYPHLRLILMSATLD 352
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
++RFSQYFGGCP+++VPGFTYPVK+FYLEDVLSIL SA++NH+DSA +P + EL EE
Sbjct: 353 SERFSQYFGGCPIVRVPGFTYPVKNFYLEDVLSILNSADNNHIDSAMPSIPIKSHELREE 412
Query: 421 NKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCM 480
+++ +DEAI+LAW+NDEFD LL+LVS EG P VYN+Q + TGL+PLMV AGKGRV DVCM
Sbjct: 413 DRAAVDEAINLAWTNDEFDTLLDLVSSEGIPEVYNFQESSTGLSPLMVFAGKGRVDDVCM 472
Query: 481 LLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSM-KQQLLDKYLATVN 539
LLS ADC L+ KDG TAL+ ++ENQ E A+++K+H+E + +D +QQLLD YL +N
Sbjct: 473 LLSFNADCHLQDKDGLTALEWAKRENQHETAEVLKRHVEVSPTDCREQQQLLDNYLGKIN 532
Query: 540 PELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH 599
PEL+D+ LIE+LLRKIC+ S DGAILVFLPGW+DI +TR+ LLANPFF+D+SKF+II LH
Sbjct: 533 PELVDVSLIERLLRKICISSRDGAILVFLPGWDDIRRTREGLLANPFFKDSSKFLIISLH 592
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
SMVPS++QKKVFKRPP GCRKIILSTNIAET+ITIDDV+YVIDSGRMKEKSYDPYNNVST
Sbjct: 593 SMVPSMEQKKVFKRPPQGCRKIILSTNIAETSITIDDVIYVIDSGRMKEKSYDPYNNVST 652
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
LQSSWVSKAS+KQR GRAGRCQ G+CYHLYS+LRAAS+PDFQVPEI+R+PIEELCLQVKL
Sbjct: 653 LQSSWVSKASSKQREGRAGRCQPGMCYHLYSKLRAASMPDFQVPEIRRMPIEELCLQVKL 712
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
LDPNC IE+FL K LDPPV TIRNAI+VLQDIGALS DE++TE+GEKLGCL VHPL+SK
Sbjct: 713 LDPNCKIEEFLGKMLDPPVPETIRNAILVLQDIGALSPDEQLTEVGEKLGCLPVHPLISK 772
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
MLFFAILM+CLDPALT+ACASDYRDPFTLP+ PNEKKRA A KFELASLYGG+SDQLAVI
Sbjct: 773 MLFFAILMNCLDPALTMACASDYRDPFTLPVLPNEKKRAAATKFELASLYGGRSDQLAVI 832
Query: 840 AAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNA 899
AA+ECWKNAK+RGQEA FCSQYF+SS M ML GMRKQL +ELI+NGFI ED S C+ N+
Sbjct: 833 AAYECWKNAKERGQEARFCSQYFISSSTMIMLHGMRKQLLSELIRNGFIQEDASCCNVNS 892
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAKVRLHPHSLNFKLSFKKTDDC 958
PGI++AVL+AGLYPMV R+ PP +NG+RF VETA GAKVRLHP SLNFKL KTDDC
Sbjct: 893 HDPGILYAVLVAGLYPMVGRVLPP-RNGKRFIVETATGAKVRLHPQSLNFKLLSNKTDDC 951
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPD-NEDDDEDDDMSD--DDA 1015
L+++DEITRG+ GM++RNCT+VGPL LLLLATEI V PA D +E+D+E DD +D D A
Sbjct: 952 SLIIFDEITRGEWGMNIRNCTIVGPLALLLLATEIVVTPAKDHDEEDNEGDDNNDGSDTA 1011
Query: 1016 DENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLS 1075
E+E DED MEIDD+ G + E +MSSPD SV VVVDRWLYF STAL++AQIYCLRERLS
Sbjct: 1012 PEDEGDEDKMEIDDRLGGHNDEKIMSSPDNSVNVVVDRWLYFSSTALEVAQIYCLRERLS 1071
Query: 1076 VAILFKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCP 1135
AILF+V HP++ LPP L ASM A A +LSYDG SGISLP ESV+SL SM+ ATEID
Sbjct: 1072 AAILFRVMHPKQELPPALAASMRATACVLSYDGQSGISLPQESVDSLASMVDATEIDSTA 1131
Query: 1136 AARNRGTGQNPSNFLMSLMSPNTRQYFPLRDHKSRIPAHKGSTKGNQLSTQVAQPPLF-- 1193
R + G NPS FL SLMS +Q P +R+PA KG + NQ ST PP+
Sbjct: 1132 PGRRKAMGHNPSGFLRSLMSNRRQQTTPHHYRNARLPAFKGKSNINQPSTCKNTPPVSSL 1191
Query: 1194 -----HGSPVVGSGSGTHIPPGPRGDSFKRPRGNWSK 1225
P+ G SG PRGDS KR RGN SK
Sbjct: 1192 DKIPDQRPPLQGHTSGKS-GSSPRGDSSKRQRGNASK 1227
>gi|359485181|ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
vinifera]
Length = 1231
Score = 1762 bits (4563), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 889/1234 (72%), Positives = 1025/1234 (83%), Gaps = 24/1234 (1%)
Query: 8 KAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKK 67
++ +++QK +Q +P VAE TRIRIS+ L F + +EVYTF+ANL+N ERAVVHEVC+K
Sbjct: 3 RSGKKRQKDGEQNNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRK 62
Query: 68 MGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGE 127
MGMTSKSSGRG QRRVSV K+KK+V+T K +E P L FSE +K VL DLFT YPPDD E
Sbjct: 63 MGMTSKSSGRGSQRRVSVYKTKKKVDTKK-EEGNPYLNFSEEAKEVLLDLFTRYPPDDKE 121
Query: 128 PGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
++ N S K++K GK+ DIF +P M+KAEIA KVE L SRIE+D +LRQI E RSK
Sbjct: 122 MVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEGRSK 181
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPI+SFKDVITST++S+QVVLISGETGCGKTTQVPQF+L+++W KGE CKIVCTQPRRIS
Sbjct: 182 LPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPRRIS 241
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK-EA 306
ATSVAERIS E+GEN+GD++GYKIRLESKGG+HSSI+FCTNG+LLR+LVS+G RLK EA
Sbjct: 242 ATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILLRVLVSKGTDRLKPEA 301
Query: 307 SNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQ 366
K AK D+S +THIIVDEIHERDRYSDFMLAI+RDML SYPHLRLILMSAT+DA+RFSQ
Sbjct: 302 LRKAAKRDISDITHIIVDEIHERDRYSDFMLAILRDMLASYPHLRLILMSATIDAERFSQ 361
Query: 367 YFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLD 426
YFGGCP+I+VPGFTYPVK+FYLEDVLSILKS +N+LDS L +P EDP+L E+ LD
Sbjct: 362 YFGGCPIIRVPGFTYPVKTFYLEDVLSILKSTGNNNLDSTLLSLPVEDPKLIEDYGVALD 421
Query: 427 EAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGA 486
EAI+LAWSNDEFD LL+ VS EG+P V+NYQH+ TGLTPLMV AGKGRV DVCM+LS GA
Sbjct: 422 EAINLAWSNDEFDPLLDFVSSEGTPQVFNYQHSSTGLTPLMVFAGKGRVADVCMMLSFGA 481
Query: 487 DCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK-QQLLDKYLATVNPELIDL 545
DC LKA D TAL L E+EN E A++IK+HMEN LS+S++ QQLLDKYLAT NPE+ID+
Sbjct: 482 DCHLKANDDTTALDLAERENHREAAEMIKQHMENLLSNSVEEQQLLDKYLATNNPEIIDV 541
Query: 546 VLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSV 605
L+EQLLRKIC DS+DGAILVFLPGW+DIN+TR++LL+ FF+D+SKFV+I LHSMVPSV
Sbjct: 542 ALVEQLLRKICNDSKDGAILVFLPGWDDINRTREKLLSASFFKDSSKFVVISLHSMVPSV 601
Query: 606 QQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 665
+QKKVFKRPPPGCRKI+LSTNI+ETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS+W+
Sbjct: 602 EQKKVFKRPPPGCRKIVLSTNISETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSAWI 661
Query: 666 SKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
SKASAKQR GRAGRC+ G+CYHLYS+LRAASLPDFQVPEIKR+PIEELCLQVKLLDPNC
Sbjct: 662 SKASAKQREGRAGRCRPGVCYHLYSKLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNCK 721
Query: 726 IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAI 785
IEDFL+KTLDPPV TIRNA+IVLQDIGALS+DEK+TELG+KLG L VHPL SKMLFFAI
Sbjct: 722 IEDFLRKTLDPPVFETIRNAVIVLQDIGALSVDEKLTELGKKLGSLPVHPLTSKMLFFAI 781
Query: 786 LMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW 845
L++CLDPALTLACASDYRDPFTLP+ P+EKKRATAAK ELASLYGG SDQLAVIAAFECW
Sbjct: 782 LLNCLDPALTLACASDYRDPFTLPMLPHEKKRATAAKAELASLYGGHSDQLAVIAAFECW 841
Query: 846 KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGII 905
K+AK++GQEA FCSQYFVSSG M+ML GMRKQLQTELI+NGFIPEDVSSCS NAR PGII
Sbjct: 842 KSAKEKGQEAQFCSQYFVSSGTMHMLAGMRKQLQTELIRNGFIPEDVSSCSLNARDPGII 901
Query: 906 HAVLMAGLYPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYD 964
HAVL+AGLYPMV RL PPHK+G+R VETA GAKVRLHPHS NFKLSFKK+D PL++YD
Sbjct: 902 HAVLVAGLYPMVGRLLPPHKSGKRSVVETASGAKVRLHPHSNNFKLSFKKSDGRPLIIYD 961
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDC 1024
EITRGDGGMH+RNCTV+GPLPLLLLATEI VAP N+DDDED D D D +E D +
Sbjct: 962 EITRGDGGMHIRNCTVIGPLPLLLLATEIVVAPGKGNDDDDEDCDDDSDGDDIDEDDSEG 1021
Query: 1025 M--EIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKV 1082
E ++K +GQ GE +MSSPD +V VVVDRW F STALD+AQIYCLRERL+ AI FK
Sbjct: 1022 DGKEANNKLNGQQGEKIMSSPDNTVAVVVDRWHSFESTALDVAQIYCLRERLTAAIFFKA 1081
Query: 1083 THPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGT 1142
TH ++ LPP+L AS+YA+A ILSYDG SGISL ESV+SLTSM+ ATEID + R R
Sbjct: 1082 THAREVLPPMLGASVYAIACILSYDGLSGISLSLESVDSLTSMVNATEIDNSASGRRR-M 1140
Query: 1143 GQNPSNFLMSLMSPNTRQYFPLRDHKSRIPAHKGSTKGNQLSTQVAQPPLFHGS------ 1196
GQNP+NFL +LMS TR P + HK +KG+ N T A P S
Sbjct: 1141 GQNPNNFLKTLMSHGTRHKSPSKHHK-----NKGAENWNSPPTYNAWSPYMPPSLTSNQR 1195
Query: 1197 ------PVVGSGSGTHIPPGPRGDSFKRPRGNWS 1224
G GS H P GPRGDSFKR RGN S
Sbjct: 1196 PSSQRPSFSGYGSSMHGPYGPRGDSFKRQRGNGS 1229
>gi|302143511|emb|CBI22072.3| unnamed protein product [Vitis vinifera]
Length = 1190
Score = 1746 bits (4523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 871/1231 (70%), Positives = 1003/1231 (81%), Gaps = 59/1231 (4%)
Query: 8 KAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKK 67
++ +++QK +Q +P VAE TRIRIS+ L F + +EVYTF+ANL+N ERAVVHEVC+K
Sbjct: 3 RSGKKRQKDGEQNNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRK 62
Query: 68 MGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGE 127
MGMTSKSSGRG QRRVSV K+KK+V+T K +E P L FSE +K VL DLFT YPPDD E
Sbjct: 63 MGMTSKSSGRGSQRRVSVYKTKKKVDTKK-EEGNPYLNFSEEAKEVLLDLFTRYPPDDKE 121
Query: 128 PGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
++ N S K++K GK+ DIF +P M+KAEIA KVE L SRIE+D +LRQI E RSK
Sbjct: 122 MVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEGRSK 181
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPI+SFKDVITST++S+QVVLISGETGCGKTTQVPQF+L+++W KGE CKIVCTQPRRIS
Sbjct: 182 LPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPRRIS 241
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
ATSVAERIS E+GEN+GD++GYKIRLESKGG+HSSI+FCTNG+LLR+LVS+G R
Sbjct: 242 ATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILLRVLVSKGTDR----- 296
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQY 367
D+S +THIIVDEIHERDRYSDFMLAI+RDML SYPHLRLILMSAT+DA+RFSQY
Sbjct: 297 ------DISDITHIIVDEIHERDRYSDFMLAILRDMLASYPHLRLILMSATIDAERFSQY 350
Query: 368 FGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDE 427
FGGCP+I+VPGFTYPVK+FYLEDVLSILKS +N+LDS L +P EDP+L E+ LDE
Sbjct: 351 FGGCPIIRVPGFTYPVKTFYLEDVLSILKSTGNNNLDSTLLSLPVEDPKLIEDYGVALDE 410
Query: 428 AISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGAD 487
AI+LAWSNDEFD LL+ VS EG+P V+NYQH+ TGLTPLMV AGKGRV DVCM+LS GAD
Sbjct: 411 AINLAWSNDEFDPLLDFVSSEGTPQVFNYQHSSTGLTPLMVFAGKGRVADVCMMLSFGAD 470
Query: 488 CQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK-QQLLDKYLATVNPELIDLV 546
C LKA D TAL L E+EN E A++IK+HMEN LS+S++ QQLLDKYLAT NPE+ID+
Sbjct: 471 CHLKANDDTTALDLAERENHREAAEMIKQHMENLLSNSVEEQQLLDKYLATNNPEIIDVA 530
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
L+EQLLRKIC DS+DGAILVFLPGW+DIN+TR++LL+ FF+D+SKFV+I LHSMVPSV+
Sbjct: 531 LVEQLLRKICNDSKDGAILVFLPGWDDINRTREKLLSASFFKDSSKFVVISLHSMVPSVE 590
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
QKKVFKRPPPGCRKI+LSTNI+ETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS+W+S
Sbjct: 591 QKKVFKRPPPGCRKIVLSTNISETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSAWIS 650
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
KASAKQR GRAGRC+ G+CYHLYS+LRAASLPDFQVPEIKR+PIEELCLQVKLLDPNC I
Sbjct: 651 KASAKQREGRAGRCRPGVCYHLYSKLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNCKI 710
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
EDFL+KTLDPPV TIRNA+IVLQDIGALS+DEK+TELG+KLG L VHPL SKMLFFAIL
Sbjct: 711 EDFLRKTLDPPVFETIRNAVIVLQDIGALSVDEKLTELGKKLGSLPVHPLTSKMLFFAIL 770
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
++CLDPALTLACASDYRDPFTLP+ P+EKKRATAAK ELASLYGG SDQLAVIAAFECWK
Sbjct: 771 LNCLDPALTLACASDYRDPFTLPMLPHEKKRATAAKAELASLYGGHSDQLAVIAAFECWK 830
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIH 906
+AK++GQEA FCSQYFVSSG M+ML GMRKQLQTELI+NGFIPEDVSSCS NAR PGIIH
Sbjct: 831 SAKEKGQEAQFCSQYFVSSGTMHMLAGMRKQLQTELIRNGFIPEDVSSCSLNARDPGIIH 890
Query: 907 AVLMAGLYPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDE 965
AVL+AGLYPMV RL PPHK+G+R VETA GAKVRLHPHS NFKLSFKK+D PL++YDE
Sbjct: 891 AVLVAGLYPMVGRLLPPHKSGKRSVVETASGAKVRLHPHSNNFKLSFKKSDGRPLIIYDE 950
Query: 966 ITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCM 1025
ITRGDGGMH+RNCTV+GPLPLLLLATEI VAP N
Sbjct: 951 ITRGDGGMHIRNCTVIGPLPLLLLATEIVVAPGKAN------------------------ 986
Query: 1026 EIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHP 1085
+K +GQ GE +MSSPD +V VVVDRW F STALD+AQIYCLRERL+ AI FK TH
Sbjct: 987 ---NKLNGQQGEKIMSSPDNTVAVVVDRWHSFESTALDVAQIYCLRERLTAAIFFKATHA 1043
Query: 1086 QKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQN 1145
++ LPP+L AS+YA+A ILSYDG SGISL ESV+SLTSM+ ATEID + R R GQN
Sbjct: 1044 REVLPPMLGASVYAIACILSYDGLSGISLSLESVDSLTSMVNATEIDNSASGRRR-MGQN 1102
Query: 1146 PSNFLMSLMSPNTRQYFPLRDHKSRIPAHKGSTKGNQLSTQVAQPPLFHGS--------- 1196
P+NFL +LMS TR P + HK +KG+ N T A P S
Sbjct: 1103 PNNFLKTLMSHGTRHKSPSKHHK-----NKGAENWNSPPTYNAWSPYMPPSLTSNQRPSS 1157
Query: 1197 ---PVVGSGSGTHIPPGPRGDSFKRPRGNWS 1224
G GS H P GPRGDSFKR RGN S
Sbjct: 1158 QRPSFSGYGSSMHGPYGPRGDSFKRQRGNGS 1188
>gi|356499332|ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
max]
Length = 1162
Score = 1600 bits (4142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 784/1161 (67%), Positives = 941/1161 (81%), Gaps = 8/1161 (0%)
Query: 1 MGKKKQKKAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAV 60
M + K E+++ + +Q+P V E TRIRISQIL+ F AS DEVY FDA+LSN+ERA+
Sbjct: 1 METTTKNKREKKKGEPLFRQNPNVDEVTRIRISQILEHFRASNDEVYKFDADLSNQERAL 60
Query: 61 VHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTH 120
VH++ KMG SKS G GK+RRV V K KK+V+TD G LP TFS +K VL DLF H
Sbjct: 61 VHQMALKMGFRSKSYGLGKERRVCVQKMKKKVDTDNGFGSLPQFTFSGEAKWVLGDLFAH 120
Query: 121 YPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ 180
YPP DG E + N +D+T+ + DIF +P M+KAEIA ++E+LTSR+ +NL+Q
Sbjct: 121 YPPGDGNSWEMVGENSDTATDRTKQRPDDIFSRPSMTKAEIARRLEALTSRMNNVSNLKQ 180
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I+E RSKLPI S+KD ITSTV+S+QVVLISGETGCGKTTQVPQF+L+H+W KGE CKIVC
Sbjct: 181 IIEGRSKLPIVSYKDSITSTVESHQVVLISGETGCGKTTQVPQFILDHMWGKGEVCKIVC 240
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRRISATSV+ERI+ ERGE IG+N+GYKIRLES+GG+ SSIV CT GVLLR+LVS+G
Sbjct: 241 TQPRRISATSVSERIASERGETIGENVGYKIRLESRGGRQSSIVLCTTGVLLRVLVSKGS 300
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
K KD++S +THII+DEIHERDRYSDFMLAIIRDMLP YPHL LILMSAT+D
Sbjct: 301 HSSKIGR---VKDEISGITHIIMDEIHERDRYSDFMLAIIRDMLPLYPHLCLILMSATID 357
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
A RFSQYFGGCP+I VPGFTYPVK+FYLEDVLSI+KS NHLDS + +P EL+EE
Sbjct: 358 AARFSQYFGGCPIIHVPGFTYPVKTFYLEDVLSIVKSRPDNHLDSTTCSIPKTTCELSEE 417
Query: 421 NKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCM 480
K ++DEAI+LAWSNDE+D+LLELVS EG+P++++YQH+LTGLTPLMV AGKGRVGD+CM
Sbjct: 418 EKLSIDEAINLAWSNDEWDLLLELVSSEGTPDLFHYQHSLTGLTPLMVFAGKGRVGDMCM 477
Query: 481 LLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQ-LLDKYLATVN 539
LLS GADC L+AKDG TAL++ E+ENQPE A+I+KKHM+N S+S++++ LLDKYLATVN
Sbjct: 478 LLSCGADCHLRAKDGMTALEIAERENQPEAAEILKKHMDNDFSNSIEEKKLLDKYLATVN 537
Query: 540 PELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH 599
PEL+D VLIEQL+RKIC+DS DG ILVFLPGW+DIN+TR+RLLA+PFF+++S F++I LH
Sbjct: 538 PELVDDVLIEQLIRKICIDSTDGGILVFLPGWDDINRTRERLLASPFFKNSSMFMLISLH 597
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
SMVPS++QKKVF+ PP GCRKI+LSTNIAETAITIDD+VYVID+GRMKEKSYDPYNNVST
Sbjct: 598 SMVPSMEQKKVFRHPPHGCRKIVLSTNIAETAITIDDIVYVIDTGRMKEKSYDPYNNVST 657
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
LQSSW+SKASAKQR GRAGRCQ GICYHLYS+ RAASLPDFQ+PEI+R+PIEELCLQVKL
Sbjct: 658 LQSSWISKASAKQREGRAGRCQPGICYHLYSRTRAASLPDFQIPEIRRMPIEELCLQVKL 717
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
LDP+C +E+FL+KTLDPPV +I NAI+VLQDIGA S DEK+T LGEKLG L VHPL+ +
Sbjct: 718 LDPSCKVEEFLRKTLDPPVFESISNAILVLQDIGAFSNDEKLTHLGEKLGSLPVHPLICR 777
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
MLFFAILM+CLDPALTLACASDYRDPFTLP+ P EKKRA+AAK ELASLYGG SDQ AV+
Sbjct: 778 MLFFAILMNCLDPALTLACASDYRDPFTLPMLPEEKKRASAAKSELASLYGGCSDQFAVL 837
Query: 840 AAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNA 899
AAFECW NAK+ G EA FCSQYFVSS MNML GMR+QLQ ELI+ GFI EDVS S N
Sbjct: 838 AAFECWNNAKKMGLEARFCSQYFVSSSAMNMLSGMRRQLQAELIRIGFIHEDVSGYSVNT 897
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP 959
PG++HAVL+AGLYP V R R VET G KVRLH HS NFKLSFKK D
Sbjct: 898 HDPGVLHAVLVAGLYPRVGRFLTNKGGKRVIVETTSGDKVRLHNHSTNFKLSFKKNLDNT 957
Query: 960 LMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENE 1019
L+VYDEITRGDGGM++RNCTVVGPLPLLLL+TEIAVAPA +N++ D DD + +D
Sbjct: 958 LIVYDEITRGDGGMNIRNCTVVGPLPLLLLSTEIAVAPAEENDEGDVDDAVGSED---EA 1014
Query: 1020 SDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAIL 1079
ED ME D ++SG + +MSSPD V V++DRWLYF STA+D+AQ+YCLRERLS AIL
Sbjct: 1015 GSEDGMEFDAESSGGREDKLMSSPDNMVKVIMDRWLYFRSTAIDVAQLYCLRERLSAAIL 1074
Query: 1080 FKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARN 1139
+KVTHP+ LPP++ AS++A+A ILS DG G+S E V++LT+M+ AT + K PA
Sbjct: 1075 YKVTHPRNTLPPIMAASVHAIACILSCDGCIGVSAMLEGVDTLTTMVNATSLGK-PATGT 1133
Query: 1140 RGTGQNPSNFLMSLMSPNTRQ 1160
R G+ P L L++ + RQ
Sbjct: 1134 RRFGKRPKGSLAELLNYDGRQ 1154
>gi|449460086|ref|XP_004147777.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1230
Score = 1582 bits (4095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 792/1221 (64%), Positives = 969/1221 (79%), Gaps = 48/1221 (3%)
Query: 32 ISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKR 91
I+Q L F + DEV+TF+A+LS RERA+VHEVC+KMGMTSKSSG G QRRVSV KSK +
Sbjct: 25 ITQALQRFCLTHDEVFTFEADLSKRERALVHEVCRKMGMTSKSSGHGDQRRVSVYKSKLQ 84
Query: 92 VETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIF 151
+ET K FSE +K VL DLF+ YPPDDGE G++ N +K+DK R ++ DIF
Sbjct: 85 METVK---------FSEKTKTVLDDLFSMYPPDDGELGKETVGNHHKKADKPRRRKDDIF 135
Query: 152 CKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISG 211
+P M+K E+ KV S T ++ AN++++ +RSKLPI+SF+DVITSTV+S+QVVLISG
Sbjct: 136 WRPSMTKEELTKKVGSYT--LKNVANMKKVSLKRSKLPIASFEDVITSTVESHQVVLISG 193
Query: 212 ETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
ETGCGKTTQVPQFLL+++W KGETCKIVCTQPRRISA SV+ERIS ERGEN+G +IGYKI
Sbjct: 194 ETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYERGENVGSDIGYKI 253
Query: 272 RLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK-EASNKPAKDDVSALTHIIVDEIHERD 330
RLESKGG+HSSIV CTNG+LLR+L+S+G+ +L EAS K K+ VS LTHIIVDE+HERD
Sbjct: 254 RLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSDLTHIIVDEVHERD 313
Query: 331 RYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
RYSDF+L I+RD+LPSYPHLRLILMSAT+DA+RFS+YFGGCP+I VPGFTYPVK+FYLED
Sbjct: 314 RYSDFILTILRDLLPSYPHLRLILMSATIDAERFSKYFGGCPIISVPGFTYPVKNFYLED 373
Query: 391 VLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGS 450
VLSI+KS+E NHLD + + V + +PELTEE+K LDE+I +AW NDEFD LLELV+ GS
Sbjct: 374 VLSIVKSSEENHLDDSIVGVSDGEPELTEEDKLDLDESIDMAWLNDEFDPLLELVASGGS 433
Query: 451 PNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEV 510
++NYQH++TGLTPLMVLAGKGRV DVCMLLS GA C+L+AKDG TAL+L E+ +Q E
Sbjct: 434 SQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGATCELQAKDGSTALELAERGDQKET 493
Query: 511 AQIIKKHMENALSDSMKQQ-LLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLP 569
A+ I+KH+E+++S+S +++ L+ YLA N +D+ LIEQLL KIC+DS++GAILVFLP
Sbjct: 494 AEAIRKHLESSMSNSKEERRLIGAYLAK-NSNSVDVRLIEQLLGKICLDSKEGAILVFLP 552
Query: 570 GWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAE 629
GW+DI+KTR+RL NP F+D SKF+II LHSMVPS +QKKVF+RPPPGCRKIILSTNIAE
Sbjct: 553 GWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAE 612
Query: 630 TAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY 689
TAITIDDVVYVIDSG MKEKSYDPY+NVST QSSW+SKASAKQR GRAGRCQ GICYHLY
Sbjct: 613 TAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLY 672
Query: 690 SQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVL 749
S+ RA+SLPDFQVPEIKR+PIEELCLQVKLLDPNC IEDFLQKTLDPPV TIRNAI+VL
Sbjct: 673 SKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPPVFDTIRNAILVL 732
Query: 750 QDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLP 809
QDIGALSLDEK+TELG+KLG L VHP+ SKML FAILM+CL PALTLACASDY+DPFTLP
Sbjct: 733 QDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLGPALTLACASDYKDPFTLP 792
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMN 869
+ P+E+K+A AAK ELASLYGG SDQLAV+AAF+CWKN K RGQE FCS+Y++SS M
Sbjct: 793 MLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNVKGRGQEVRFCSKYYISSSTMT 852
Query: 870 MLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
ML GMR+QL+ EL++NGFIPEDVS+C+ NA PGI+HAVL+AGLYPMV RL PP K G+R
Sbjct: 853 MLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKR 912
Query: 930 -FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
VET G++V LHP SLNF+LS K+TD PL+VYDE+TRGDGG H+RNCT+VGPLPLL+
Sbjct: 913 AVVETGSGSRVLLHPQSLNFELSLKQTDSHPLIVYDEVTRGDGGTHIRNCTIVGPLPLLM 972
Query: 989 LATEIAVAPAPDNED---DDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDK 1045
+A +IAVAPA ++ + ++ + + A +E+ ++ M+I++K++ Q E +MSSPD
Sbjct: 973 VAKDIAVAPAKESNNRKGGTKNKNKGNGKAGIDETAQEKMDIENKSNQQPEEMIMSSPDN 1032
Query: 1046 SVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
SVTVVVDRWL F S ALDIAQ+YCLRERLS AILFKV HP LPPVL ASM+A+A ILS
Sbjct: 1033 SVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVLGASMHALACILS 1092
Query: 1106 YDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQ-----NPSNFLMSLMSPNTRQ 1160
YDG SGISL ESVE LTSM+ ATEI R+ GT + +P++ + R+
Sbjct: 1093 YDGLSGISL--ESVEMLTSMVNATEIGHFAPGRSIGTHKKDVRTSPNSVYARSTPQSQRE 1150
Query: 1161 YFPLR-------------------DHKSRIPAHKGSTKGNQLSTQVAQPPLFHGSPVVGS 1201
+ P + +H +R + + +++ + +PP S + G
Sbjct: 1151 HKPFKLGKDQDAAQQQQQQQQHVQEHNTR---KQRKSHKERMAAKQQKPPSGDLS-LNGY 1206
Query: 1202 GSGTHIPPGPRGDSFKRPRGN 1222
G T+ P GPRG S KRPRGN
Sbjct: 1207 GLNTYGPYGPRGISLKRPRGN 1227
>gi|449502177|ref|XP_004161565.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36-like [Cucumis sativus]
Length = 1286
Score = 1564 bits (4049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 770/1124 (68%), Positives = 929/1124 (82%), Gaps = 20/1124 (1%)
Query: 32 ISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKR 91
I+Q L F + DEV+TF+A+LS RERA+VHEVC+KMGMTSKSSG G QRRVSV KSK +
Sbjct: 25 ITQALQRFCLTHDEVFTFEADLSKRERALVHEVCRKMGMTSKSSGHGDQRRVSVYKSKLQ 84
Query: 92 VETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIF 151
+ET K FSE +K VL DLF+ YPPDDGE G++ N +K+DK R ++ DIF
Sbjct: 85 METVK---------FSEXTKTVLDDLFSMYPPDDGELGKETVGNHHKKADKPRRRKDDIF 135
Query: 152 CKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISG 211
+P M+K E+ KV S T ++ AN++++ +RSKLPI+SF+DVITSTV+S+QVVLISG
Sbjct: 136 WRPSMTKEELTKKVGSYT--LKNVANMKKVSLKRSKLPIASFEDVITSTVESHQVVLISG 193
Query: 212 ETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
ETGCGKTTQVPQFLL+++W KGETCKIVCTQPRRISA SV+ERIS ERGEN+G +IGYKI
Sbjct: 194 ETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYERGENVGSDIGYKI 253
Query: 272 RLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK-EASNKPAKDDVSALTHIIVDEIHERD 330
RLESKGG+HSSIV CTNG+LLR+L+S+G+ +L EAS K K+ VS LTHIIVDE+HERD
Sbjct: 254 RLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSDLTHIIVDEVHERD 313
Query: 331 RYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
RYSDF+L I+RD+LPSYPHLRLILMSAT+DA+RFS+YFGGCP+I VPGFTYPVK+FYLED
Sbjct: 314 RYSDFILTILRDLLPSYPHLRLILMSATIDAERFSKYFGGCPIISVPGFTYPVKNFYLED 373
Query: 391 VLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGS 450
VLSI+KS+E NHLD + + V + +PELTEE+K LDE+I +AW NDEFD LLELV+ GS
Sbjct: 374 VLSIVKSSEENHLDDSIVGVSDGEPELTEEDKLDLDESIDMAWLNDEFDPLLELVASGGS 433
Query: 451 PNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEV 510
++NYQH++TGLTPLMVLAGKGRV DVCMLLS GA C+L+AKDG TAL+L E+ +Q E
Sbjct: 434 SQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGATCELQAKDGSTALELAERGDQKET 493
Query: 511 AQIIKKHMENALSDSMKQQ-LLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLP 569
A+ I+KH+E+++S+S +++ L+ YLA N +D+ LIEQLL KIC+DS++GAILVFLP
Sbjct: 494 AEAIRKHLESSMSNSKEERRLIGAYLAK-NSNSVDVRLIEQLLGKICLDSKEGAILVFLP 552
Query: 570 GWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAE 629
GW+DI+KTR+RL NP F+D SKF+II LHSMVPS +QKKVF+RPPPGCRKIILSTNIAE
Sbjct: 553 GWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAE 612
Query: 630 TAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY 689
TAITIDDVVYVIDSG MKEK YDPY+NVST QSSW+SKASAKQR GRAGRCQ GICYHLY
Sbjct: 613 TAITIDDVVYVIDSGWMKEKXYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLY 672
Query: 690 SQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVL 749
S+ RA+SLPDFQVPEIKR+PIEELCLQVKLLDPNC IEDFLQKTLDPPV TIRNAI+VL
Sbjct: 673 SKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPPVFDTIRNAILVL 732
Query: 750 QDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLP 809
QDIGALSLDEK+TELG+KLG L VHP+ SKML FAILM+CL PALTLACASDY+DPFTLP
Sbjct: 733 QDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLGPALTLACASDYKDPFTLP 792
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMN 869
+ P+E+K+A AAK ELASLYGG SDQLAV+AAF+CWKN K RGQE FCS+Y++SS M
Sbjct: 793 MLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNVKGRGQEVRFCSKYYISSSTMT 852
Query: 870 MLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
ML GMR+QL+ EL++NGFIPEDVS+C+ NA PGI+HAVL+AGLYPMV RL PP K G+R
Sbjct: 853 MLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKR 912
Query: 930 -FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
VET G++V LHP SLNF+LS K+TD PL+VYDE+TRGDGG H+RNCT+VGPLPLL+
Sbjct: 913 AVVETGSGSRVLLHPQSLNFELSLKQTDSHPLIVYDEVTRGDGGTHIRNCTIVGPLPLLM 972
Query: 989 LATEIAVAPAPDNED---DDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDK 1045
+A +IAVAPA ++ + ++ + + A +E+ ++ M+I++K++ Q E +MSSPD
Sbjct: 973 VAKDIAVAPAKESNNRKGGTKNKNKGNGKAGIDETAQEKMDIENKSNQQPEEMIMSSPDN 1032
Query: 1046 SVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
SVTVVVDRWL F S ALDIAQ+YCLRERLS AILFKV HP LPPVL ASM+A+A ILS
Sbjct: 1033 SVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVLGASMHALACILS 1092
Query: 1106 YDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPSNF 1149
YDG SGISL ESVE LTSM+ ATEI R+ GT + S F
Sbjct: 1093 YDGLSGISL--ESVEMLTSMVNATEIGHFAPGRSIGTHKKVSWF 1134
>gi|356553621|ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
max]
Length = 1164
Score = 1558 bits (4035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/1145 (67%), Positives = 932/1145 (81%), Gaps = 11/1145 (0%)
Query: 19 QQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRG 78
+Q+P V E TRI ISQIL+ F AS DEVY FDA LSN+ERA+VH++ KMG SKS G G
Sbjct: 20 RQNPNVDEVTRICISQILEQFRASNDEVYKFDAGLSNQERALVHQMALKMGFRSKSYGLG 79
Query: 79 KQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDAN-QS 137
K+RRV V K KK+V+TD G LP TFS +K VL DLF H+PP +G E + N +
Sbjct: 80 KERRVCVQKMKKKVDTDNGFGSLPPFTFSGEAKWVLGDLFAHHPPGEGNLWEMVGENSED 139
Query: 138 RKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVI 197
+D T+ + DIF +P M+KAEIA ++E+L SR+ +NL+QI E RSKLPI+SFKD I
Sbjct: 140 TTTDGTKQRPGDIFSRPSMTKAEIARRLEALASRMNNVSNLKQINEGRSKLPIASFKDSI 199
Query: 198 TSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISV 257
TSTV+S+QVVLISGETGCGKTTQVPQF+L+H+W KGE CKIVCTQPRRISATSV+ERI+
Sbjct: 200 TSTVESHQVVLISGETGCGKTTQVPQFILDHMWGKGEVCKIVCTQPRRISATSVSERIAS 259
Query: 258 ERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA 317
ERGE IG+N+GYKIRLES+GG+ SSIV CT GV+LR+LVS+G K KD++S
Sbjct: 260 ERGETIGENVGYKIRLESRGGRQSSIVLCTTGVVLRVLVSKGSHSSKTGR---VKDEISG 316
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVP 377
+THII+DEIHERDRYSDFMLAIIRDMLP YPHLRLILMSAT+DA RFSQYFGGCP+I VP
Sbjct: 317 ITHIIMDEIHERDRYSDFMLAIIRDMLPLYPHLRLILMSATIDAARFSQYFGGCPIIHVP 376
Query: 378 GFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDE 437
GFTYPVK+FYLEDVLSI+KS NHLDS + +P EL+EE K ++DEAI+LAWSNDE
Sbjct: 377 GFTYPVKTFYLEDVLSIVKSRHDNHLDSTTCSIPKNTCELSEEEKLSIDEAINLAWSNDE 436
Query: 438 FDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRT 497
+D+LLELVS EG+P ++NYQH+LTGLTPLMV AGKGRVGD+CMLLS GAD L+AKDG
Sbjct: 437 WDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGKGRVGDMCMLLSCGADFCLRAKDGMA 496
Query: 498 ALQLGEQENQPEVAQIIKKHMENALSDSMKQQ-LLDKYLATVNPELIDLVLIEQLLRKIC 556
AL++ E+ENQPE A+I+KKHM++ S+SM+++ LLDKYLATVNPEL+D VLIEQL+RKIC
Sbjct: 497 ALEIAERENQPEAAEILKKHMDSDFSNSMEEKKLLDKYLATVNPELVDDVLIEQLIRKIC 556
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
+DS DG ILVFLPGW+DIN+TR+RLLA+ FF+++S F++I LHSMVPS++QKKVF+RPP
Sbjct: 557 IDSTDGGILVFLPGWDDINRTRERLLASSFFKNSSMFMLISLHSMVPSMEQKKVFRRPPH 616
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
GCRKI+LSTNIAETAITIDD+VYVID+GRMKEKSYD YNNVSTLQSSW+SKASAKQR GR
Sbjct: 617 GCRKIVLSTNIAETAITIDDIVYVIDTGRMKEKSYDAYNNVSTLQSSWISKASAKQREGR 676
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDP 736
AGRCQ GICYHLYS+ RA SLPDFQ+PEI+R+PIEELCLQVKLLDP+C +E+FL KTLDP
Sbjct: 677 AGRCQPGICYHLYSRTRAVSLPDFQIPEIRRMPIEELCLQVKLLDPSCKVEEFLCKTLDP 736
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
PV +IRNAIIVLQDIGALS DEK+T+LGEKLG L VHPL+ +MLFFAILM+CLDPALTL
Sbjct: 737 PVFESIRNAIIVLQDIGALSNDEKLTQLGEKLGSLPVHPLICRMLFFAILMNCLDPALTL 796
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW 856
ACASDYRDPFTLP+ P EKKRA+AAK+ELASLYGG SDQ A++AAFECW NAK+ G EA
Sbjct: 797 ACASDYRDPFTLPMLPEEKKRASAAKYELASLYGGCSDQFAILAAFECWNNAKKMGLEAR 856
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPM 916
FCSQYFVSS MNML GMR+QLQ ELI+ GFI EDVS S N PG+++AVL+AGLYP
Sbjct: 857 FCSQYFVSSSTMNMLSGMRRQLQAELIRLGFIHEDVSGYSVNTHDPGVLNAVLVAGLYPR 916
Query: 917 VARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVR 976
V R R VET G KVRLH HS+NFKLSFKK D L+VYDEITRGDGGM++R
Sbjct: 917 VGRFLTNKSGKRVIVETTSGDKVRLHNHSINFKLSFKKKLDDTLIVYDEITRGDGGMNLR 976
Query: 977 NCTVVGPLPLLLLATEIAVAPAPDNEDDDEDD-DMSDDDADENESDEDCMEIDDKTSGQH 1035
NCTVVGPLPLLLL+TEIAVAPA +N++ DEDD S+D+A ED ME D ++SG
Sbjct: 977 NCTVVGPLPLLLLSTEIAVAPAEENDEGDEDDVGGSEDEA----GSEDVMEFDAESSGGR 1032
Query: 1036 GENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEA 1095
+ +MSSPD V V++DRWLYF STA+D+AQ+YCLRERLS AIL+KVT+P+ LPP++ A
Sbjct: 1033 EDKLMSSPDNMVKVIMDRWLYFCSTAIDVAQLYCLRERLSAAILYKVTNPRNTLPPIMAA 1092
Query: 1096 SMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPSNFLMSLMS 1155
S++A+A ILS DG G+ E VE+LT+M+ AT + K PA R G+ P L L++
Sbjct: 1093 SVHAIACILSCDGCIGVPAMLEGVETLTTMVNATTLGK-PATGTRRFGKRPKGSLAELLN 1151
Query: 1156 PNTRQ 1160
+ RQ
Sbjct: 1152 YDGRQ 1156
>gi|115440165|ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group]
gi|53792445|dbj|BAD53353.1| putative DEIH-box RNA/DNA helicase [Oryza sativa Japonica Group]
gi|53793557|dbj|BAD53327.1| putative DEIH-box RNA/DNA helicase [Oryza sativa Japonica Group]
gi|113533893|dbj|BAF06276.1| Os01g0767700 [Oryza sativa Japonica Group]
Length = 1223
Score = 1468 bits (3800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 735/1138 (64%), Positives = 896/1138 (78%), Gaps = 25/1138 (2%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
V EAT +R+S++L+ F AS +VY F+ +S +ERA +HE+C+KMGM SKSSG G++R +
Sbjct: 43 VREATLVRVSKVLEDFQASDAQVYKFEPGISKQERAAIHEMCRKMGMISKSSGNGERRCL 102
Query: 84 SVCKSKKR--VETDKGKEILPS-LTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKS 140
SV K K+ +ET++G PS L FS ++ VLQDLF HYPPDD E N S K+
Sbjct: 103 SVYKRKQNQGLETEEG----PSHLGFSVEARNVLQDLFMHYPPDDAELNGHTVRNSSDKA 158
Query: 141 DKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITST 200
K + K FC+P + K +I KVE L S++ K LR+IV++RSKLPISS+KD I+ST
Sbjct: 159 VKIQWKPDGAFCRPALRKPDILKKVEMLASKVNKSEQLRKIVQDRSKLPISSYKDAISST 218
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERG 260
++++QVVLISGETGCGKTTQVPQ++L+H+W KGE+CKIVCTQPRRISA SVAERIS ERG
Sbjct: 219 LENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVCTQPRRISAISVAERISAERG 278
Query: 261 ENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD-VSALT 319
E++GD +GYKIRLESKGGK+SSI+FCTNGVLLRLL+ + + KE + K + DD V+ +T
Sbjct: 279 ESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGRVTNISKEQNQKRSFDDAVTGIT 338
Query: 320 HIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGF 379
HIIVDEIHERDR+SDFMLAI+RD+LP YPHLRL+LMSAT+DA+RFS YF GCP IQVPGF
Sbjct: 339 HIIVDEIHERDRFSDFMLAILRDLLPLYPHLRLVLMSATIDAERFSNYFSGCPFIQVPGF 398
Query: 380 TYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFD 439
T+PVK+FYLEDVLSIL+S NHLD + + + LT++ KS++DEAI+LA NDEFD
Sbjct: 399 THPVKTFYLEDVLSILQSVGDNHLDPTTDDL-KQSSLLTDDYKSSMDEAINLALDNDEFD 457
Query: 440 MLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTAL 499
LLEL+S E + ++NYQH+ TG+TPLMVLAGKG+VGD+CMLLS G DC + DG++AL
Sbjct: 458 PLLELISAEQNQEIFNYQHSETGVTPLMVLAGKGQVGDICMLLSFGVDCSTRDHDGKSAL 517
Query: 500 QLGEQENQPEVAQIIKKHMENALSD-SMKQQLLDKYLATVNPELIDLVLIEQLLRKICMD 558
EQ NQ EV ++IKKHME + + + +LL+KYLAT+NPE ID VLIE+LLRKIC+D
Sbjct: 518 GWAEQGNQQEVCEVIKKHMECGSAKLTEENELLNKYLATINPEHIDTVLIERLLRKICVD 577
Query: 559 SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
S +GAILVFLPGWEDIN+TR+RLLA+PFF+D+SKF+++ LHSM+PS +QKKVFKRPP G
Sbjct: 578 SNEGAILVFLPGWEDINQTRERLLASPFFQDSSKFLVLSLHSMIPSSEQKKVFKRPPAGS 637
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKIILSTNIAETA+TIDDVV+VIDSGRMKEKSYDPYNNVSTL SSWVSKA+A+QR GRAG
Sbjct: 638 RKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHSSWVSKANARQRQGRAG 697
Query: 679 RCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
RCQ G CYHLYS+ RAASL ++Q+PEIKR+PIEELCLQVKLLDPNC I DFL+KTLDPP+
Sbjct: 698 RCQPGTCYHLYSRFRAASLLEYQIPEIKRMPIEELCLQVKLLDPNCRIADFLRKTLDPPI 757
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
T+RNAI VLQD+GAL+ DE++TELGEKLG L VHP SKML F ILM+CLDPALTLAC
Sbjct: 758 PETVRNAITVLQDLGALTQDEQLTELGEKLGSLPVHPSTSKMLLFGILMNCLDPALTLAC 817
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFC 858
A+DYRDPF LP++P+E+KRA AAK ELASLYGG SDQLAV+AA +CW+ AK RGQEA FC
Sbjct: 818 AADYRDPFLLPMAPDERKRAAAAKVELASLYGGYSDQLAVVAAMDCWRRAKDRGQEAQFC 877
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVA 918
S+YFVSS MNML MRKQLQ EL + GF+P D S+CS NAR PGII AVLMAG YPMV
Sbjct: 878 SKYFVSSNTMNMLSNMRKQLQNELAQRGFVPVDASACSLNARDPGIIRAVLMAGAYPMVG 937
Query: 919 RLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRN 977
RL PP KN RR +ETA GAKVRLHPHS NF LSF+KT PL++YDEITRGDGGM+++N
Sbjct: 938 RLLPPRKNTRRAVIETASGAKVRLHPHSCNFNLSFRKTSGNPLVIYDEITRGDGGMYIKN 997
Query: 978 CTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGE 1037
+VVG PL++LATE+ VAP P+++D DE+D S +D E T GQH E
Sbjct: 998 SSVVGSYPLIILATEMVVAP-PEDDDSDEEDGDSSEDETEK-----------VTLGQHKE 1045
Query: 1038 NVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASM 1097
+MSSPD SV+VV+DRWL F +TALD+AQIYCLRERL+ AILFKV HPQ LPP L A+M
Sbjct: 1046 -IMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPDLGATM 1104
Query: 1098 YAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPSNFLMSLMS 1155
YA+A ILSYDG + + S S + E + R G P FLMSL+S
Sbjct: 1105 YAIACILSYDGLPAMITSDDVATSQGSNQSSAESSRFSQGRRVGY-IPPGGFLMSLLS 1161
>gi|357131041|ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Brachypodium
distachyon]
Length = 1272
Score = 1466 bits (3796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/1157 (62%), Positives = 896/1157 (77%), Gaps = 24/1157 (2%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
++E T +R++ +L+ F AS +V+TF+AN+S +ERA +HE+C+KMGM SKS G ++R +
Sbjct: 93 LSEETLVRVTTVLEEFRASDAQVHTFEANISKQERAAIHEICRKMGMISKSKGYAERRCL 152
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
SV K K+ DK +E L FSE ++ VLQDLFTHYPP D E + N S K+ K
Sbjct: 153 SVYKRKQTQGPDK-EEGPSKLGFSEEARNVLQDLFTHYPPTDAELNGEAVKNSSDKAAKI 211
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDS 203
+ K FC+P M K +IA KVE L S+I + LR+IVE+RSKLPISSFKD I+ST+++
Sbjct: 212 QWKTDSAFCRPVMHKHDIAKKVEILASKINESRQLRKIVEDRSKLPISSFKDHISSTLEN 271
Query: 204 NQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENI 263
NQVVLISGETGCGKTTQVPQ++L+H+W KGE+CKI+CTQPRRISA SVAERIS ERGE +
Sbjct: 272 NQVVLISGETGCGKTTQVPQYILDHVWGKGESCKIICTQPRRISAISVAERISAERGEVV 331
Query: 264 GDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD-VSALTHII 322
GD +GYKIRLESKGGK+SSI+FCTNGVLLRLL+ + + K + K + DD V +THII
Sbjct: 332 GDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGRVTNMPKAKNPKRSFDDAVMGITHII 391
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDEIHERDR+SDFMLAI+RD+LP YPHL L+LMSAT+DA+RFSQYF GCP+IQVPG TYP
Sbjct: 392 VDEIHERDRFSDFMLAILRDLLPVYPHLHLVLMSATIDAERFSQYFNGCPIIQVPGHTYP 451
Query: 383 VKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLL 442
VK FYLEDVLSIL+S NHL+ A+ + +D LT++ +S++DE+IS+A +NDEFD L+
Sbjct: 452 VKIFYLEDVLSILQSVGDNHLNPATDDL-EQDSILTDDYRSSMDESISMALANDEFDPLI 510
Query: 443 ELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLG 502
EL+S+E SP ++NY+H+ +G+TPLMV AGKG++GDVCMLLS G DC + DG++AL
Sbjct: 511 ELISVEQSPEIFNYRHSESGVTPLMVFAGKGQIGDVCMLLSFGVDCSARDHDGKSALDWA 570
Query: 503 EQENQPEVAQIIKKHME-NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSED 561
+QENQ +V ++IKKHM+ ++ + +LL++YL T+NPE ID VLIE+LLRKIC+DS +
Sbjct: 571 QQENQQQVYEVIKKHMDCGSVKSPQENELLNRYLTTINPEHIDTVLIERLLRKICIDSNE 630
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
GA+LVFLPGWEDIN+TR+RL A+P F+D+SKF+I+ LHSM+PSV+QKKVFK PP G RKI
Sbjct: 631 GAVLVFLPGWEDINQTRERLFASPLFQDSSKFLILSLHSMIPSVEQKKVFKSPPVGVRKI 690
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
ILSTNIAETA+TIDDVV+VIDSG+MKEKSYDPYNNVSTL +SWVS+ASA+QR GRAGRCQ
Sbjct: 691 ILSTNIAETAVTIDDVVFVIDSGKMKEKSYDPYNNVSTLHTSWVSRASARQREGRAGRCQ 750
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVT 741
G CYHLYS RAASLP++Q+PEIKR+PIEELCLQVKLLDPNC I DFL+KTLDPP+ T
Sbjct: 751 PGTCYHLYSGFRAASLPEYQIPEIKRMPIEELCLQVKLLDPNCRIADFLKKTLDPPIPET 810
Query: 742 IRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASD 801
++NAI VLQD+GAL+ DE++T+LGEKLG L VHP SKML F ILM+CLDPALTLACA+D
Sbjct: 811 VKNAITVLQDLGALTQDEQLTDLGEKLGSLPVHPSTSKMLLFGILMNCLDPALTLACAAD 870
Query: 802 YRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQY 861
YRDPF LP++P+E+K+A AAK ELASLYGG SDQLAV+AAF+CW AK RGQEA FCS+Y
Sbjct: 871 YRDPFVLPMAPDERKKAAAAKVELASLYGGFSDQLAVVAAFDCWICAKDRGQEALFCSKY 930
Query: 862 FVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLR 921
FV++ MNML MRKQL +EL + GF+P D S+CS NA+VPGII AVL+AG YPMV RL
Sbjct: 931 FVAANTMNMLSNMRKQLHSELSQRGFLPADASACSLNAKVPGIISAVLVAGAYPMVGRLL 990
Query: 922 PPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTV 980
PP +N +R VETA GAKVRLHPHS NF LSF K+ PLM+YDEITRGDGGM+++NC+V
Sbjct: 991 PPRRNCKRAVVETASGAKVRLHPHSCNFNLSFNKSYGNPLMIYDEITRGDGGMYIKNCSV 1050
Query: 981 VGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVM 1040
VG PL+LLATE+AVAP D + E E + TSGQ E +M
Sbjct: 1051 VGSYPLVLLATEMAVAPP---------------DDSDEEEGSSEDEAEKNTSGQQNEEIM 1095
Query: 1041 SSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAM 1100
S PD +V+V++DRWL F +TALDIAQIYCLRERL+ AILFKV HPQ LPP L A+MYA+
Sbjct: 1096 SLPDNTVSVIIDRWLRFDATALDIAQIYCLRERLASAILFKVKHPQDVLPPALGATMYAV 1155
Query: 1101 ASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPSNFLMSLMS---PN 1157
A ILSYDG G+ A+ + S +TE + R R + P FLMSL+S PN
Sbjct: 1156 ACILSYDGLPGMVESADLSTNRGSNQSSTEASRFTQGR-RASYIPPGGFLMSLLSDIPPN 1214
Query: 1158 TRQYFPLRDHKSRIPAH 1174
Q+ H H
Sbjct: 1215 APQFRKSSHHPGGASGH 1231
>gi|357494083|ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
gi|355518665|gb|AET00289.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
Length = 1190
Score = 1458 bits (3774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 716/1135 (63%), Positives = 899/1135 (79%), Gaps = 10/1135 (0%)
Query: 1 MGKKKQKKAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAV 60
M KKA + + ++ Q + E+TR RI + L+ F +S +E Y F+A LSN +R
Sbjct: 1 MSNVSNKKANKLARFKKYAQPTKIDESTRRRIIRTLESFQSSDEEEYKFEAGLSNDDRRF 60
Query: 61 VHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTH 120
H + +KMG SKS G GK+RR+SV K K+ +D LP TFSE +K + DLF H
Sbjct: 61 AHLLAQKMGFKSKSYGTGKERRLSVRKGNKKGGSDNQSANLPHFTFSEEAKRAMGDLFAH 120
Query: 121 YPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ 180
+PP DG + + +S R + DIF +P M+K EI K+E++TSR E ++L+
Sbjct: 121 FPPGDGNLKDMV-GEKSGSMVNARHRHSDIFSRPIMTKDEITRKLEAVTSRRETVSDLKV 179
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I RSKLPI+S+KD ITS V+S+QVVLISGETGCGKTTQVPQ++L+++W KGETCKI+C
Sbjct: 180 ITVLRSKLPIASYKDAITSAVESHQVVLISGETGCGKTTQVPQYILDYMWGKGETCKILC 239
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRRISA SV+ERIS ERGE G+N+GYKIRL+SKGG+ SSIV CT GVLLR+LVS+G
Sbjct: 240 TQPRRISAMSVSERISRERGEAAGENVGYKIRLDSKGGQQSSIVLCTTGVLLRVLVSKGS 299
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
R + PAKD++S +THII+DEIHERDRYSDFMLAI+RDMLP YPHLRL+LMSAT+D
Sbjct: 300 RR---SMKNPAKDEISDITHIIMDEIHERDRYSDFMLAIMRDMLPLYPHLRLVLMSATID 356
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
RFSQYFGGCPVIQVPGFTYPVK++YLEDVLS +KS+ D ++ +P + ++EE
Sbjct: 357 TARFSQYFGGCPVIQVPGFTYPVKTYYLEDVLSAVKSSND---DGSTFSIPTNNHMISEE 413
Query: 421 NKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCM 480
+K + DEAI+LAWSNDE+D+L ELVS E +P ++NYQH+LTGLTPLMV AGKGR+G++CM
Sbjct: 414 HKLSFDEAINLAWSNDEWDLLSELVSSEETPELFNYQHSLTGLTPLMVFAGKGRIGEMCM 473
Query: 481 LLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNP 540
LLS GADC L++KDG TAL++ E+ENQPE A+IIKKHM+ + S + +Q +L+KYL V P
Sbjct: 474 LLSFGADCNLRSKDGTTALEIAERENQPEAAEIIKKHMDGS-SSTEEQSILNKYLERVRP 532
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
E++D+VLIEQL+RKIC DS+DG ILVF GW+DIN+ R++LLA+ FF + SKFV+I LHS
Sbjct: 533 EIVDVVLIEQLIRKICTDSKDGGILVFFSGWDDINRAREKLLASSFFNNPSKFVVISLHS 592
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
MVP+++QKKVFKRPPPGCRKI+LSTN+AETA+TIDD+VYVID+GRMKEKSYDPYNNVSTL
Sbjct: 593 MVPTLEQKKVFKRPPPGCRKIVLSTNLAETAVTIDDIVYVIDTGRMKEKSYDPYNNVSTL 652
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
QSSW+SKASAKQR GRAGRCQ GICYHLYS+LRAASLPDFQ PE+KR+PIEELCLQVK+L
Sbjct: 653 QSSWISKASAKQREGRAGRCQPGICYHLYSKLRAASLPDFQTPELKRMPIEELCLQVKML 712
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
DP+C IE FL KTLDPPVS +IRNAI+VL+DIGALS DE +T+LGEKLG L VHPL+S+M
Sbjct: 713 DPSCKIEVFLAKTLDPPVSESIRNAIVVLRDIGALSTDETLTDLGEKLGSLPVHPLISRM 772
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
LFFAILM+CLDPALTLACASDY+DPFTLP+ P +KKRA AK ELASLYGG DQ AV+A
Sbjct: 773 LFFAILMNCLDPALTLACASDYKDPFTLPMLPEDKKRAADAKTELASLYGGCGDQFAVLA 832
Query: 841 AFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNAR 900
AFECW N+K+ G EA FCSQYFVS G M ML GMRKQLQ ELI+ GFI DVSS S NA
Sbjct: 833 AFECWNNSKKMGLEARFCSQYFVSGGAMKMLSGMRKQLQKELIRIGFILSDVSSYSMNAH 892
Query: 901 VPGIIHAVLMAGLYPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCP 959
PG++HAVL++G+YPMV RL P+K +R +ETA G KVRLH S NFKLSFK+
Sbjct: 893 DPGVLHAVLVSGMYPMVGRLCFPNKGAKRAIIETASGDKVRLHNRSTNFKLSFKRNLGHT 952
Query: 960 LMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENE 1019
L+V+DE+TRGD G++++NC++VGPLPLLLL+TEIAVAP N+ E +D DD+ +E
Sbjct: 953 LVVFDEVTRGDMGVNIKNCSLVGPLPLLLLSTEIAVAPGEQNDHKKEAEDDDDDEGSGDE 1012
Query: 1020 SD-EDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAI 1078
+ +D M++D K+ G + + MSSPD V ++VDRWLYFGSTA+D++ +YCLRERLS AI
Sbjct: 1013 AGIDDGMDLDTKSIGNNEDKFMSSPDDMVRIIVDRWLYFGSTAIDVSLLYCLRERLSAAI 1072
Query: 1079 LFKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDK 1133
L+KVT+P LPP+L AS++A+A ILS DG SG+S+ + V++LT+M+ AT + K
Sbjct: 1073 LYKVTYPSNPLPPILGASIHAIACILSCDGCSGMSVATDGVDNLTTMVNATNLGK 1127
>gi|242054513|ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [Sorghum bicolor]
gi|241928377|gb|EES01522.1| hypothetical protein SORBIDRAFT_03g035700 [Sorghum bicolor]
Length = 1299
Score = 1452 bits (3759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 738/1234 (59%), Positives = 916/1234 (74%), Gaps = 57/1234 (4%)
Query: 1 MGKKKQKKAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAV 60
MG+K +K + S + EAT +R+S++L+ F AS EVYTF+ +S +ERA
Sbjct: 105 MGRKG-RKGKGAAAGPAAGGSGGMREATLVRVSKVLEDFRASNAEVYTFEPGISRQERAA 163
Query: 61 VHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPS-LTFSEGSKLVLQDLFT 119
+H++C+KMGM SKSSG G++R +SV K K++ E + E PS L FSE ++ VLQDLF
Sbjct: 164 IHQMCRKMGMLSKSSGNGEKRCLSVYKRKQKREPEM--EEGPSYLGFSEEARHVLQDLFM 221
Query: 120 HYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLR 179
HYPP D + D N S K+ + K FC+P MSK +I KVE L S++ LR
Sbjct: 222 HYPPGDADLNGDFDRNSSDKAANIKWKTDSAFCRPVMSKLDITKKVEMLASKVNGSYQLR 281
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIV 239
+I+E+R+KLPISSFKDVITST++++QVVLISG+TGCGKTTQVPQ++L+H+W KGE+CKI+
Sbjct: 282 KIMEDRTKLPISSFKDVITSTLENHQVVLISGQTGCGKTTQVPQYILDHMWGKGESCKII 341
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRRISA SVAERIS ERGE +GD +GYKIRLESKGG++SS++FCTNGVLLR+L+ +G
Sbjct: 342 CTQPRRISAISVAERISAERGEAVGDTVGYKIRLESKGGQNSSVLFCTNGVLLRVLIGRG 401
Query: 300 VSRLKEASNKPAK-------DDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
K + A+ D + +THIIVDEIHERDR+SDFML I+RD+LP YPHLRL
Sbjct: 402 TKTSKARNPSKARNQKRSLDDAILGITHIIVDEIHERDRFSDFMLTILRDLLPVYPHLRL 461
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
+LMSAT+DA+RFSQYF GC VIQVPGFTYPVKSFYLEDVLSIL+SA NHL++ S
Sbjct: 462 VLMSATIDAERFSQYFNGCSVIQVPGFTYPVKSFYLEDVLSILQSAGDNHLNTTS--DKK 519
Query: 413 EDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGK 472
E LT++ KS++D++I+LA NDEFD LLEL+S E + V NYQH+ TG+TPL+V A K
Sbjct: 520 ESIVLTDDFKSSMDDSINLALVNDEFDPLLELISAEQNREVCNYQHSETGVTPLIVFAAK 579
Query: 473 GRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK-QQLL 531
G++GDVCMLLS G DC + DG++AL ++ENQ EV ++IKKHME + S + +LL
Sbjct: 580 GQLGDVCMLLSFGVDCSAQDHDGKSALDWAQEENQQEVYEVIKKHMECSSEKSTEDNELL 639
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+KYLAT+NPE ID +LIE+LL KIC+DS +GAILVFLPGWEDIN+TR+RL A+PFFRD+S
Sbjct: 640 NKYLATINPEHIDTLLIERLLGKICVDSNEGAILVFLPGWEDINQTRERLFASPFFRDSS 699
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+F+++ LHSM+PS +QKKVFKRPP G RKIILSTNIAETA+TIDDVV+VIDSGRMKEKSY
Sbjct: 700 RFLVLSLHSMIPSSEQKKVFKRPPAGVRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSY 759
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
DPYNNVSTL +SWVSKASA+QR GRAGRCQ G CYHLYS+ RA+SLPD+Q+PEIKR+PIE
Sbjct: 760 DPYNNVSTLHASWVSKASARQREGRAGRCQPGTCYHLYSRFRASSLPDYQIPEIKRMPIE 819
Query: 712 ELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
ELCLQVKLLD NC I DFL+KTLDPP+ T+ NAI VLQD+GAL+ DE++TELGEKLG L
Sbjct: 820 ELCLQVKLLDSNCRIADFLKKTLDPPIPETVGNAIAVLQDLGALTQDEQLTELGEKLGSL 879
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGG 831
VHP +KML FAILM+CLDPALTLACA+DYRDPF LPI+P+E+KRA AA+ ELASLYGG
Sbjct: 880 PVHPSTTKMLLFAILMNCLDPALTLACAADYRDPFVLPIAPDERKRAAAARVELASLYGG 939
Query: 832 QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
SDQLAV+AAF+CW+ A+ RGQE+ FC++YFVSS +MNML MRKQLQ EL + GF+P D
Sbjct: 940 FSDQLAVVAAFDCWRRARDRGQESQFCAKYFVSSNIMNMLSNMRKQLQNELSQRGFVPAD 999
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKL 950
S+CS N++ PGI+ AVLMAG YPMV +L PP KN R+ VETA GAKVRLHPHS NF L
Sbjct: 1000 ASACSLNSKDPGIMRAVLMAGAYPMVGKLLPPRKNARKAVVETASGAKVRLHPHSCNFNL 1059
Query: 951 SFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDM 1010
SF K+ PL++YDEITRGDGGM+++N +VVG PLLL+ATE+ VAP
Sbjct: 1060 SFNKSYGNPLLIYDEITRGDGGMYIKNSSVVGSYPLLLIATEMVVAPP------------ 1107
Query: 1011 SDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCL 1070
DD + E + E ++ T QH E++MSSPD +V+VVVDRWL F +TALD+AQIYCL
Sbjct: 1108 --DDDSDEEENSSEDEAEESTLVQHKEDIMSSPDSTVSVVVDRWLRFDATALDVAQIYCL 1165
Query: 1071 RERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATE 1130
RERL+ AILFKV HPQ LPP L AS YA+A ILSYDG + P + + S E
Sbjct: 1166 RERLASAILFKVKHPQDVLPPALGASTYAIACILSYDGLPAMVPPNDLSANQGSGQNLAE 1225
Query: 1131 IDKCPAARNRGTGQNPSNFLMSLMSPNTRQYFPLRDHKSRIPAHKGSTKGNQLSTQVAQP 1190
+ R G PS FLMSL++ T H G G TQ ++
Sbjct: 1226 ASRFSQGRRTGY-IPPSGFLMSLLADKT---------------HPG---GASAHTQPSRA 1266
Query: 1191 PL--FHGS--PVVGSGSGTHIPPGPRGDSFKRPR 1220
P+ F S P SG G+ P SFKR R
Sbjct: 1267 PVGRFDRSQRPFRSSGPGSSAP-----RSFKRQR 1295
>gi|297826501|ref|XP_002881133.1| hypothetical protein ARALYDRAFT_902078 [Arabidopsis lyrata subsp.
lyrata]
gi|297326972|gb|EFH57392.1| hypothetical protein ARALYDRAFT_902078 [Arabidopsis lyrata subsp.
lyrata]
Length = 1299
Score = 1449 bits (3751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 733/1162 (63%), Positives = 899/1162 (77%), Gaps = 37/1162 (3%)
Query: 22 PTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQR 81
PT EATRI +++++ F AS +EVYTF+ NLSN ER V+H++C+KMG+ SKSSGRG+QR
Sbjct: 15 PTSVEATRIWATKVIEDFRASGNEVYTFEHNLSNSERGVIHQMCRKMGIQSKSSGRGEQR 74
Query: 82 RVSVCKSKKR------VETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDAN 135
R+S+ KS+ + KE L ++F GS +LQ+LFTHYPP DG+
Sbjct: 75 RLSIFKSRHKNGKNNEANEKSNKEKLKCVSFPPGSDAILQELFTHYPPCDGDTAATSFNK 134
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKD 195
S K + D F KP++S EI KV SL+SR++KD L++I + RSKLPI+S+KD
Sbjct: 135 YSGNKGKQGQWKDDFFRKPQISSEEILEKVASLSSRLKKDKALKEISKMRSKLPITSYKD 194
Query: 196 VITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIVCTQPRRISATSVAER 254
ITS V+SNQV+LISGETGCGKTTQVPQ+LL+H+WS K ETCKIVCTQPRRISA SV+ER
Sbjct: 195 AITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSVSER 254
Query: 255 ISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
IS ERGE+IG+NIGYK+RL+SKGG+HSS+VFCTNG+LLR+LV +G +
Sbjct: 255 ISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG-----------SVSS 303
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
VS +THIIVDEIHERD YSDFMLAIIRD+LPS PHLRLILMSATLDA+RFS YFGGCPV+
Sbjct: 304 VSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVV 363
Query: 375 QVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWS 434
+VPGFTYPV++ YLEDVLSILKS NHL SA+L +P+ +LT+E+K LDEAI LAW+
Sbjct: 364 RVPGFTYPVRTLYLEDVLSILKSGGDNHLSSANLSIPDHKLDLTDEDKLALDEAIILAWT 423
Query: 435 NDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD 494
NDEFD LL+LVS GS +YNYQH T LTPLMV AGKGR+ DVCMLLS GAD LK+KD
Sbjct: 424 NDEFDTLLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGRISDVCMLLSFGADWNLKSKD 483
Query: 495 GRTALQLGEQENQPEVAQIIKKHMENALSDSMK-QQLLDKYLATVNPELIDLVLIEQLLR 553
G TAL+L E ENQ E AQII++H +N S+S + QQLLDKY+AT+NPE +D+ LI+QL+R
Sbjct: 484 GMTALELAETENQLEAAQIIREHADNFQSNSQQGQQLLDKYMATINPEQVDVSLIQQLMR 543
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
KIC DSEDGAILVFLPGW+DINKTR RLL NPFF D++KF II LHSMVP+ +QKKVF R
Sbjct: 544 KICGDSEDGAILVFLPGWDDINKTRQRLLDNPFFADSAKFDIICLHSMVPAGEQKKVFNR 603
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PP GCRKI+L+TNIAE+A+TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA+AKQR
Sbjct: 604 PPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQR 663
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGRCQ GICYHLYS+LRAAS+PDF+VPEIKR+P+EELCLQVK+LDPNC DFLQK
Sbjct: 664 EGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKL 723
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
LDPPV +I NA+ +LQDIGAL+ E++TELGEK G L VHPL+SKMLFFA+L++CLDPA
Sbjct: 724 LDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPA 783
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LTLACA+DY++PFT+P+SP E+++A AAK ELASL GG SD LAV+AAFECWKNAK+RG
Sbjct: 784 LTLACAADYKEPFTMPMSPGERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKERGL 843
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGL 913
A FCSQYFVS M ML MR QL++EL ++G IP D+SSCS N+R PGI+ AVL GL
Sbjct: 844 SAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNSRDPGILRAVLAVGL 903
Query: 914 YPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
YPMV RL P N RR VETA GAKVR+H S NF LS KK D+ L+V+DEITRGDGG
Sbjct: 904 YPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDES-LVVFDEITRGDGG 962
Query: 973 MHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTS 1032
MH+RNCTV LPLLL++TEIAVAP ++ DD ++ +++ ++ED M+I K
Sbjct: 963 MHIRNCTVARDLPLLLVSTEIAVAPTGSSDSDDSGEEEEEEEEVGANTNEDRMDI-HKEE 1021
Query: 1033 GQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPV 1092
+ G +MSSP+ SV +VVDRWL F +TAL++AQ+Y LRERL +ILFKVTHP++ LPP
Sbjct: 1022 KRRGAKMMSSPENSVKLVVDRWLPFRTTALEVAQMYILRERLMASILFKVTHPREHLPPH 1081
Query: 1093 LEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPSNFLMS 1152
L ASM+A+A ILSYDG +G+S ES+ S + + G + P++FL S
Sbjct: 1082 LGASMHAIAGILSYDGQAGLSYTPESMGPKHSRNEMYDTG--------GWEEKPNSFLNS 1133
Query: 1153 LMSPNTRQYFPLRDHKSRIPAH 1174
L ++ L +++ P+H
Sbjct: 1134 L-------FWSLSLKENKHPSH 1148
>gi|218189117|gb|EEC71544.1| hypothetical protein OsI_03881 [Oryza sativa Indica Group]
Length = 1277
Score = 1442 bits (3732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 724/1137 (63%), Positives = 877/1137 (77%), Gaps = 49/1137 (4%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
V EAT +R+S++L+ F AS +VY F+ +S +ERA +HE+C+KMGM SKSSG G++R +
Sbjct: 123 VREATLVRVSKVLEDFQASDAQVYKFEPGISKQERAAIHEMCRKMGMISKSSGNGERRCL 182
Query: 84 SVCKSKKR--VETDKGKEILPS-LTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKS 140
SV K K+ +ET++G PS L FS ++ VLQDLF HYPPDD E N S K+
Sbjct: 183 SVYKRKQNQGLETEEG----PSHLGFSVEARNVLQDLFMHYPPDDAELNGHTVRNSSDKA 238
Query: 141 DKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITST 200
K + K FC+P + K +I KVE L S++ K LR+IV++RSKLPISS+KD I+ST
Sbjct: 239 VKIQWKPDGAFCRPALRKPDILKKVEMLASKVNKSEQLRKIVQDRSKLPISSYKDAISST 298
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERG 260
++++QVVLISGETGCGKTTQVPQ++L+H+W KGE+CKIVCTQPRRISA SVAERIS ERG
Sbjct: 299 LENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVCTQPRRISAISVAERISAERG 358
Query: 261 ENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTH 320
E++GD +GYKIRLESKGGK+SSI+FCTNGVLLRLL+ +
Sbjct: 359 ESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGR---------------------- 396
Query: 321 IIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFT 380
DEIHERDR+SDFMLAI+RD+LP YPHLRL+LMSAT+DA+RFS YF GCP IQVPGFT
Sbjct: 397 ---DEIHERDRFSDFMLAILRDLLPLYPHLRLVLMSATIDAERFSNYFSGCPFIQVPGFT 453
Query: 381 YPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDM 440
+PVK+FYLEDVLSIL+S NHLD + + + LT++ KS++DEAI+LA NDEFD
Sbjct: 454 HPVKTFYLEDVLSILQSVGDNHLDPTTDDL-KQSSLLTDDYKSSMDEAINLALDNDEFDP 512
Query: 441 LLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQ 500
LLEL+S E + ++NYQH+ TG+TPLMVLAGKG+VGD+CMLLS G DC + DG++AL
Sbjct: 513 LLELISAEQNQEIFNYQHSETGVTPLMVLAGKGQVGDICMLLSFGVDCSTRDHDGKSALD 572
Query: 501 LGEQENQPEVAQIIKKHMENALSD-SMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDS 559
EQ NQ EV ++IKKHME + + + +LL+KYLAT+NPE ID VLIE+LLRKIC+DS
Sbjct: 573 WAEQGNQQEVCEVIKKHMECGSAKLTEENELLNKYLATINPEHIDTVLIERLLRKICVDS 632
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
+GAILVFLPGWEDIN+TR+RLLA+PFF+D+SKF+++ LHSM+PS +QKKVFKRPP G R
Sbjct: 633 NEGAILVFLPGWEDINQTRERLLASPFFQDSSKFLVLSLHSMIPSSEQKKVFKRPPAGSR 692
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
KIILSTNIAETA+TIDDVV+VIDSGRMKEKSYDPYNNVSTL SSWVSKA+A+QR GRAGR
Sbjct: 693 KIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHSSWVSKANARQRQGRAGR 752
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
CQ G CYHLYS+ RAASL ++Q+PEIKR+PIEELCLQVKLLDPNC I DFL+KTLDPPV
Sbjct: 753 CQPGTCYHLYSRFRAASLLEYQIPEIKRMPIEELCLQVKLLDPNCRIADFLRKTLDPPVP 812
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
T+RNAI VLQD+GAL+ DE++TELGEKLG L VHP SKML F ILM+CLDPALTLACA
Sbjct: 813 ETVRNAITVLQDLGALTQDEQLTELGEKLGSLPVHPSTSKMLLFGILMNCLDPALTLACA 872
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCS 859
+DYRDPF LP++P+E+KRA AAK ELASLYGG SDQLAV+AA +CW+ AK RGQEA FCS
Sbjct: 873 ADYRDPFLLPMAPDERKRAAAAKVELASLYGGYSDQLAVVAAMDCWRRAKDRGQEAQFCS 932
Query: 860 QYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVAR 919
+YFVSS MNML MRKQLQ EL + GF+P D S+CS NAR PGII AVLMAG YPMV R
Sbjct: 933 KYFVSSNTMNMLSNMRKQLQNELAQRGFVPVDASACSLNARDPGIIRAVLMAGAYPMVGR 992
Query: 920 LRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNC 978
L PP KN RR +ETA GAKVRLHPHS NF LSF+KT PL++YDEITRGDGGM+++N
Sbjct: 993 LLPPRKNTRRAVIETASGAKVRLHPHSCNFNLSFRKTSGNPLVIYDEITRGDGGMYIKNS 1052
Query: 979 TVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGEN 1038
+VVG PL++LATE+ VAP DDD+DE + D E + T GQH E
Sbjct: 1053 SVVGSYPLIILATEMVVAPP------------EDDDSDEEDGDSSEDETEKVTLGQHKE- 1099
Query: 1039 VMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMY 1098
+MSSPD SV+VV+DRWL F +TALD+AQIYCLRERL+ AILFKV HPQ LPP L A+MY
Sbjct: 1100 IMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPDLGATMY 1159
Query: 1099 AMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPSNFLMSLMS 1155
A+A ILSYDG + + S S + E + R G P FLMSL+S
Sbjct: 1160 AIACILSYDGLPAMITSDDVATSQGSNQSSAESSRFSQGRRVGY-IPPGGFLMSLLS 1215
>gi|1353239|gb|AAB01660.1| putative RNA helicase A [Arabidopsis thaliana]
Length = 1291
Score = 1439 bits (3726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/1142 (64%), Positives = 890/1142 (77%), Gaps = 30/1142 (2%)
Query: 22 PTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQR 81
PT EATRI +++++ F AS +EVYTF+ NLSN ER V+H++C+KMG+ SKSSGRG+QR
Sbjct: 15 PTSVEATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQR 74
Query: 82 RVSVCKS------KKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDAN 135
R+S+ KS K KE L ++F G+ ++LQ+LFTHYPP DG+
Sbjct: 75 RLSIFKSRHKNGNKNEANEKSNKEKLKCVSFPPGADVILQELFTHYPPCDGDTAATSFTK 134
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKD 195
S K + D F KP++S EI KV SL+SR++KD L++I + RSKLPI+SFKD
Sbjct: 135 YSGNKGKQGQWKDDFFRKPQISSEEILEKVASLSSRLKKDKALKEITKLRSKLPITSFKD 194
Query: 196 VITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIVCTQPRRISATSVAER 254
ITS V+SNQV+LISGETGCGKTTQVPQ+LL+H+WS K ETCKIVCTQPRRISA SV+ER
Sbjct: 195 AITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSVSER 254
Query: 255 ISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
IS ERGE+IG+NIGYK+RL+SKGG+HSS+VFCTNG+LLR+LV +G +
Sbjct: 255 ISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG-----------SVSS 303
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
VS +THIIVDEIHERD YSDFMLAIIRD+LPS PHLRLILMSATLDA+RFS YFGGCPV+
Sbjct: 304 VSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVV 363
Query: 375 QVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWS 434
+VPGFTYPV++ YLEDVLSILKS NHL S +L + + +LT+E+K LDEAI LAW+
Sbjct: 364 RVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSISDHKLDLTDEDKLALDEAIILAWT 423
Query: 435 NDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD 494
NDEFD LL+LVS GS +YNYQH T LTPLMV AGKGR+ DVCMLLS GAD LK+KD
Sbjct: 424 NDEFDALLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGRISDVCMLLSFGADWSLKSKD 483
Query: 495 GRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQ-LLDKYLATVNPELIDLVLIEQLLR 553
G TAL+L E ENQ E AQII++H +N+ S+S + Q LLDKY+AT+NPE +D+ LI+QL+R
Sbjct: 484 GMTALELAEAENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATINPEQVDVSLIQQLMR 543
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
KIC DSEDGAILVFLPGW+DINKTR RLL NPFF D++KF II LHSMVP+ +QKKVF R
Sbjct: 544 KICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNR 603
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PPPGCRKI+L+TNIAE+A+TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA+AKQR
Sbjct: 604 PPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQR 663
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGRCQ GICYHLYS+LRAAS+PDF+VPEIKR+P+EELCLQVK+LDPNC DFLQK
Sbjct: 664 QGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKL 723
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
LDPPV +I NA+ +LQDIGAL+ E++TELGEK G L VHPL+SKMLFFA+L++CLDPA
Sbjct: 724 LDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPA 783
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LTLACA+DY++PFT+P+SP E+++A AAK ELASL GG SD LAV+AAFECWKNAK RG
Sbjct: 784 LTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRGL 843
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGL 913
A FCSQYFVS M ML MR QL++EL ++G IP D+SSCS N+R PGI+ AVL GL
Sbjct: 844 SAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNSRDPGILRAVLAVGL 903
Query: 914 YPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
YPMV RL P N RR VETA GAKVR+H S NF LS KK D+ L+V+DEITRGDGG
Sbjct: 904 YPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDES-LLVFDEITRGDGG 962
Query: 973 MHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTS 1032
MH+RNCTV LPLLL++TEIAVAP ++ DD +++ DD+ ++E+ M+I K
Sbjct: 963 MHIRNCTVARDLPLLLISTEIAVAPTGSSDSDDSNEEEEDDEEAAANTNEEGMDI-HKEE 1021
Query: 1033 GQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPV 1092
+ G +MSSP+ SV +VVDRWL F +TAL++AQ+Y LRERL +ILFKVTHP++ LPP
Sbjct: 1022 SRRGAKMMSSPENSVKLVVDRWLPFRTTALEVAQMYILRERLMASILFKVTHPREHLPPH 1081
Query: 1093 LEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPSNFLMS 1152
L ASM+A+A ILSYDG +G+S P ES+ S + + G + P++FL S
Sbjct: 1082 LGASMHAIAGILSYDGHAGLSCPPESMVPKHSRTEMYDTG--------GWEEKPNSFLNS 1133
Query: 1153 LM 1154
L
Sbjct: 1134 LF 1135
>gi|42570340|ref|NP_850154.2| protein helicase in vascular tissue and tapetum [Arabidopsis
thaliana]
gi|330253348|gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis
thaliana]
Length = 1299
Score = 1438 bits (3722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 737/1170 (62%), Positives = 903/1170 (77%), Gaps = 45/1170 (3%)
Query: 22 PTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQR 81
PT EATRI +++++ F AS +EVYTF+ NLSN ER V+H++C+KMG+ SKSSGRG+QR
Sbjct: 15 PTSVEATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQR 74
Query: 82 RVSVCKS------KKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDAN 135
R+S+ KS K KE L ++F G+ ++LQ+LFTHYPP DG+
Sbjct: 75 RLSIFKSRHKNGNKNEANEKSNKEKLKCVSFPPGADVILQELFTHYPPCDGDTAATSFTK 134
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKD 195
S K + D F KP++S EI KV SL+SR++KD L++I + RSKLPI+SFKD
Sbjct: 135 YSGNKGKQGQWKDDFFRKPQISSEEILEKVASLSSRLKKDKALKEITKLRSKLPITSFKD 194
Query: 196 VITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIVCTQPRRISATSVAER 254
ITS V+SNQV+LISGETGCGKTTQVPQ+LL+H+WS K ETCKIVCTQPRRISA SV+ER
Sbjct: 195 AITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSVSER 254
Query: 255 ISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
IS ERGE+IG+NIGYK+RL+SKGG+HSS+VFCTNG+LLR+LV +G +
Sbjct: 255 ISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG-----------SVSS 303
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
VS +THIIVDEIHERD YSDFMLAIIRD+LPS PHLRLILMSATLDA+RFS YFGGCPV+
Sbjct: 304 VSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVV 363
Query: 375 QVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWS 434
+VPGFTYPV++ YLEDVLSILKS NHL S +L + + +LT+E+K LDEAI LAW+
Sbjct: 364 RVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSISDHKLDLTDEDKLALDEAIILAWT 423
Query: 435 NDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD 494
NDEFD LL+LVS GS +YNYQH T LTPLMV AGKGR+ DVCMLLS GAD LK+KD
Sbjct: 424 NDEFDALLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGRISDVCMLLSFGADWSLKSKD 483
Query: 495 GRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQ-LLDKYLATVNPELIDLVLIEQLLR 553
G TAL+L E ENQ E AQII++H +N+ S+S + Q LLDKY+AT+NPE +D+ LI+QL+R
Sbjct: 484 GMTALELAEAENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATINPEQVDVSLIQQLMR 543
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
KIC DSEDGAILVFLPGW+DINKTR RLL NPFF D++KF II LHSMVP+ +QKKVF R
Sbjct: 544 KICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNR 603
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PPPGCRKI+L+TNIAE+A+TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA+AKQR
Sbjct: 604 PPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQR 663
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGRCQ GICYHLYS+LRAAS+PDF+VPEIKR+P+EELCLQVK+LDPNC DFLQK
Sbjct: 664 QGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKL 723
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
LDPPV +I NA+ +LQDIGAL+ E++TELGEK G L VHPL+SKMLFFA+L++CLDPA
Sbjct: 724 LDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPA 783
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LTLACA+DY++PFT+P+SP E+++A AAK ELASL GG SD LAV+AAFECWKNAK RG
Sbjct: 784 LTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRGL 843
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGL 913
A FCSQYFVS M ML MR QL++EL ++G IP D+SSCS N+R PGI+ AVL GL
Sbjct: 844 SAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNSRDPGILRAVLAVGL 903
Query: 914 YPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
YPMV RL P N RR VETA GAKVR+H S NF LS KK D+ L+V+DEITRGDGG
Sbjct: 904 YPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDES-LLVFDEITRGDGG 962
Query: 973 MHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDD---ADENE-----SDEDC 1024
MH+RNCTV LPLLL++TEIAVAP ++ DD +++ DD+ A+ NE ++E+
Sbjct: 963 MHIRNCTVARDLPLLLISTEIAVAPTGSSDSDDSNEEEEDDEEVAANTNEEVAANTNEEG 1022
Query: 1025 MEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTH 1084
M+I K + G +MSSP+ SV +VVDRWL F +TAL++AQ+Y LRERL +ILFKVTH
Sbjct: 1023 MDI-HKEESRRGAKMMSSPENSVKLVVDRWLPFRTTALEVAQMYILRERLMASILFKVTH 1081
Query: 1085 PQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQ 1144
P++ LPP L ASM+A+A ILSYDG +G+S P ES+ S + + G +
Sbjct: 1082 PREHLPPHLGASMHAIAGILSYDGHAGLSCPPESMVPKHSRTEMYDTG--------GWEE 1133
Query: 1145 NPSNFLMSLMSPNTRQYFPLRDHKSRIPAH 1174
P++FL SL ++ L +++ P+H
Sbjct: 1134 KPNSFLNSL-------FWSLSLKENKHPSH 1156
>gi|222619309|gb|EEE55441.1| hypothetical protein OsJ_03588 [Oryza sativa Japonica Group]
Length = 1286
Score = 1380 bits (3573), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 697/1083 (64%), Positives = 843/1083 (77%), Gaps = 29/1083 (2%)
Query: 78 GKQRRVSVCKSKKR--VETDKGKEILPS-LTFSEGSKLVLQDLFTHYPPDDGEPGEKLDA 134
G++R +SV K K+ +ET++G PS L FS ++ VLQDLF HYPPDD E
Sbjct: 166 GERRCLSVYKRKQNQGLETEEG----PSHLGFSVEARNVLQDLFMHYPPDDAELNGHTVR 221
Query: 135 NQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFK 194
N S K+ K + K FC+P + K +I KVE L S++ K LR+IV++RSKLPISS+K
Sbjct: 222 NSSDKAVKIQWKPDGAFCRPALRKPDILKKVEMLASKVNKSEQLRKIVQDRSKLPISSYK 281
Query: 195 DVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAER 254
D I+ST++++QVVLISGETGCGKTTQVPQ++L+H+W KGE+CKIVCTQPRRISA SVAER
Sbjct: 282 DAISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVCTQPRRISAISVAER 341
Query: 255 ISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
IS ERGE++GD +GYKIRLESKGGK+SSI+FCTNGVLLRLL+ + R+ E + +
Sbjct: 342 ISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGR---RIAENIYQLFLCN 398
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
H+ DEIHERDR+SDFMLAI+RD+LP YPHLRL+LMSAT+DA+RFS YF GCP I
Sbjct: 399 SERAEHL--DEIHERDRFSDFMLAILRDLLPLYPHLRLVLMSATIDAERFSNYFSGCPFI 456
Query: 375 QVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWS 434
QVPGFT+PVK+FYLEDVLSIL+S NHLD + + + LT++ KS++DEAI+LA
Sbjct: 457 QVPGFTHPVKTFYLEDVLSILQSVGDNHLDPTTDDL-KQSSLLTDDYKSSMDEAINLALD 515
Query: 435 NDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD 494
NDEFD LLEL+S E + ++NYQH+ TG+TPLMVLAGKG+VGD+CMLLS G DC + D
Sbjct: 516 NDEFDPLLELISAEQNQEIFNYQHSETGVTPLMVLAGKGQVGDICMLLSFGVDCSTRDHD 575
Query: 495 GRTALQLGEQENQPEVAQIIKKHMENALSD-SMKQQLLDKYLATVNPELIDLVLIEQLLR 553
G++AL EQ NQ EV ++IKKHME + + + +LL+KYLAT+NPE ID VLIE+LLR
Sbjct: 576 GKSALGWAEQGNQQEVCEVIKKHMECGSAKLTEENELLNKYLATINPEHIDTVLIERLLR 635
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
KIC+DS +GAILVFLPGWEDIN+TR+RLLA+PFF+D+SKF+++ LHSM+PS +QKKVFKR
Sbjct: 636 KICVDSNEGAILVFLPGWEDINQTRERLLASPFFQDSSKFLVLSLHSMIPSSEQKKVFKR 695
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PP G RKIILSTNIAETA+TIDDVV+VIDSGRMKEKSYDPYNNVSTL SSWVSKA+A+QR
Sbjct: 696 PPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHSSWVSKANARQR 755
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGRCQ G CYHLYS+ RAASL ++Q+PEIKR+PIEELCLQVKLLDPNC I DFL+KT
Sbjct: 756 QGRAGRCQPGTCYHLYSRFRAASLLEYQIPEIKRMPIEELCLQVKLLDPNCRIADFLRKT 815
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
LDPP+ T+RNAI VLQD+GAL+ DE++TELGEKLG L VHP SKML F ILM+CLDPA
Sbjct: 816 LDPPIPETVRNAITVLQDLGALTQDEQLTELGEKLGSLPVHPSTSKMLLFGILMNCLDPA 875
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LTLACA+DYRDPF LP++P+E+KRA AAK ELASLYGG SDQLAV+AA +CW+ AK RGQ
Sbjct: 876 LTLACAADYRDPFLLPMAPDERKRAAAAKVELASLYGGYSDQLAVVAAMDCWRRAKDRGQ 935
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGL 913
EA FCS+YFVSS MNML MRKQLQ EL + GF+P D S+CS NAR PGII AVLMAG
Sbjct: 936 EAQFCSKYFVSSNTMNMLSNMRKQLQNELAQRGFVPVDASACSLNARDPGIIRAVLMAGA 995
Query: 914 YPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
YPMV RL PP KN RR +ETA GAKVRLHPHS NF LSF+KT PL++YDEITRGDGG
Sbjct: 996 YPMVGRLLPPRKNTRRAVIETASGAKVRLHPHSCNFNLSFRKTSGNPLVIYDEITRGDGG 1055
Query: 973 MHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTS 1032
M+++N +VVG PL++LATE+ VAP DDD+DE + D E + T
Sbjct: 1056 MYIKNSSVVGSYPLIILATEMVVAPP------------EDDDSDEEDGDSSEDETEKVTL 1103
Query: 1033 GQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPV 1092
GQH E +MSSPD SV+VV+DRWL F +TALD+AQIYCLRERL+ AILFKV HPQ LPP
Sbjct: 1104 GQHKE-IMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPD 1162
Query: 1093 LEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPSNFLMS 1152
L A+MYA+A ILSYDG + + S S + E + R G P FLMS
Sbjct: 1163 LGATMYAIACILSYDGLPAMITSDDVATSQGSNQSSAESSRFSQGRRVGY-IPPGGFLMS 1221
Query: 1153 LMS 1155
L+S
Sbjct: 1222 LLS 1224
>gi|297843464|ref|XP_002889613.1| nuclear deih-boxhelicase [Arabidopsis lyrata subsp. lyrata]
gi|297335455|gb|EFH65872.1| nuclear deih-boxhelicase [Arabidopsis lyrata subsp. lyrata]
Length = 1580
Score = 1308 bits (3385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/1157 (57%), Positives = 854/1157 (73%), Gaps = 65/1157 (5%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E T +++L+ F AS ++ Y F+ +L+N ER ++H++C+ MG+ SKS G G++RR+
Sbjct: 13 LCETTGAWATKLLEDFRASGNDSYVFEQHLTNSERGIIHQMCRTMGIRSKSHGTGEERRL 72
Query: 84 SVCK--------SKKRVET--DKGKE---------------------------ILPSLTF 106
S+ K SK+R ET KG+E L ++F
Sbjct: 73 SLFKRDDISKSDSKRRFETRNQKGREGDGLSKSYSKHRYETKFQKGGAIRKSQKLKCVSF 132
Query: 107 SEGSKLVLQDLFTHYPPDDGEP-GEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKV 165
+K VL DLFT YPP DG+ G L + D F KP+++K +I KV
Sbjct: 133 PPEAKAVLHDLFTRYPPCDGDTTGTSLGIYTGNVHSNWKD---DFFKKPQLTKNDIQNKV 189
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
SL+SR+EK+ R+I+E RSKLPI+SF+D I S V+SNQVVLI+GETGCGKTTQVPQ+L
Sbjct: 190 ASLSSRLEKEKRFREIIEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYL 249
Query: 226 LEHIW-SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
L+H+W SK E CKI+CTQPRRISA SV++RIS ERGE IG +GYK+RL+S+GG+ SS+V
Sbjct: 250 LDHMWHSKQEVCKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRGSSVV 309
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCTNG+LLR+L+ +GV+ V +THIIVDEIHERD YSDFML I+RD+L
Sbjct: 310 FCTNGILLRVLIGKGVNSC-----------VPDITHIIVDEIHERDSYSDFMLMILRDLL 358
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLD 404
PS PHLRLILMSATLDA+RFS+YFGGCPV++VPGFTYPV++F+LED L++L S ++NHL
Sbjct: 359 PSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLEDALAVLNSDKNNHLL 418
Query: 405 SASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLT 464
SA +P++ + +E+K +LDEAI LAW+NDEFD L++LVS EGS YNYQ++ TGLT
Sbjct: 419 SADSNIPSDKRDFKDEDKVSLDEAIDLAWTNDEFDCLIDLVSSEGSHEAYNYQNSTTGLT 478
Query: 465 PLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSD 524
PLMV AGKGRV DVC LLS GADC LK+K+G TAL L E+ENQ E AQII++H N S+
Sbjct: 479 PLMVFAGKGRVSDVCKLLSFGADCTLKSKEGITALVLAEKENQFETAQIIREHGGNIQSN 538
Query: 525 SMK-QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLA 583
S + Q LLDKY+AT+ PE +D+ LI +L++KIC DSE GAILVFLPGWE+I KT+++LL
Sbjct: 539 SQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSEAGAILVFLPGWEEIRKTKEKLLD 598
Query: 584 NPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDS 643
+ FF D+ KF+I+ LHS VP+ +QKKVF RPP GCRKI+L+TNIAE+A+TIDDVVYVIDS
Sbjct: 599 DRFFADSDKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDS 658
Query: 644 GRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVP 703
GRMKEKSYDPYN+VSTLQSSWVSKA+AKQRAGRAGRCQAGICYHLYS+LRAASL +++VP
Sbjct: 659 GRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLSEYRVP 718
Query: 704 EIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
E+ R+P++ELCLQVK+LDPNCN+ DFL K +DPPV+ +I NA+I+L+DIGAL+ E++TE
Sbjct: 719 EVMRMPVDELCLQVKMLDPNCNVNDFLHKLMDPPVAQSIANALIILKDIGALTPQEELTE 778
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG+K G L VHP +SKM++FAIL++CLDPAL LACA+D +DPFT+P+SP ++K+A AAK
Sbjct: 779 LGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKH 838
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
ELASLYG SD LA +AAF+CWKNAK+ GQ FCS+YF+S VM L +R++LQ EL
Sbjct: 839 ELASLYGDHSDHLATVAAFQCWKNAKESGQAKEFCSKYFISQIVMKRLDDLRRKLQGELS 898
Query: 884 KNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKN-GRRFVETAGGAKVRLH 942
++G IP S+CS NA PGI+ AV+ GLYPM+ R+ P KN R VET GAKVR+
Sbjct: 899 RHGVIPSS-SNCSLNAHDPGILRAVIAVGLYPMLGRMCPVSKNQTRSVVETIAGAKVRVP 957
Query: 943 PHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
S N LS K D+ L+V+DEITRGD G+ +R+C+V+ +PLLL + EIAV+
Sbjct: 958 SLSKNVDLSSTKYDEA-LIVFDEITRGDWGVQIRSCSVLPTIPLLLFSREIAVSTT---- 1012
Query: 1003 DDDEDDDMSDDDAD-ENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTA 1061
+ D SDD+ D E E+ D M+I DK G+ GE +M +P+ SV VVVDRWL F TA
Sbjct: 1013 -ESYDAVKSDDEEDHEVENVGDAMDI-DKEGGRPGEKIMLAPENSVKVVVDRWLPFKVTA 1070
Query: 1062 LDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVES 1121
+IAQ+Y LRERL +ILFKV HP++ LPP L ASMYA+ASILSYD + S+ +V+
Sbjct: 1071 FEIAQMYILRERLMASILFKVKHPKENLPPHLGASMYAIASILSYDSLAQSSVQTGAVQP 1130
Query: 1122 LTSMIQATE-IDKCPAA 1137
+ S++ AT D P+A
Sbjct: 1131 IASVVDATSPRDDIPSA 1147
>gi|20196900|gb|AAM14828.1| putative RNA helicase A [Arabidopsis thaliana]
Length = 1114
Score = 1293 bits (3346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 659/999 (65%), Positives = 794/999 (79%), Gaps = 39/999 (3%)
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIVCTQPRR 245
KLPI+SFKD ITS V+SNQV+LISGETGCGKTTQVPQ+LL+H+WS K ETCKIVCTQPRR
Sbjct: 1 KLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRR 60
Query: 246 ISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKE 305
ISA SV+ERIS ERGE+IG+NIGYK+RL+SKGG+HSS+VFCTNG+LLR+LV +G
Sbjct: 61 ISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG------ 114
Query: 306 ASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFS 365
+ VS +THIIVDEIHERD YSDFMLAIIRD+LPS PHLRLILMSATLDA+RFS
Sbjct: 115 -----SVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFS 169
Query: 366 QYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTL 425
YFGGCPV++VPGFTYPV++ YLEDVLSILKS NHL S +L + + +LT+E+K L
Sbjct: 170 GYFGGCPVVRVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSISDHKLDLTDEDKLAL 229
Query: 426 DEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLG 485
DEAI LAW+NDEFD LL+LVS GS +YNYQH T LTPLMV AGKGR+ DVCMLLS G
Sbjct: 230 DEAIILAWTNDEFDALLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGRISDVCMLLSFG 289
Query: 486 ADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQ-LLDKYLATVNPELID 544
AD LK+KDG TAL+L E ENQ E AQII++H +N+ S+S + Q LLDKY+AT+NPE +D
Sbjct: 290 ADWSLKSKDGMTALELAEAENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATINPEQVD 349
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPS 604
+ LI+QL+RKIC DSEDGAILVFLPGW+DINKTR RLL NPFF D++KF II LHSMVP+
Sbjct: 350 VSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPA 409
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+QKKVF RPPPGCRKI+L+TNIAE+A+TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW
Sbjct: 410 GEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 469
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
VSKA+AKQR GRAGRCQ GICYHLYS+LRAAS+PDF+VPEIKR+P+EELCLQVK+LDPNC
Sbjct: 470 VSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNC 529
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
DFLQK LDPPV +I NA+ +LQDIGAL+ E++TELGEK G L VHPL+SKMLFFA
Sbjct: 530 KTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFA 589
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+L++CLDPALTLACA+DY++PFT+P+SP E+++A AAK ELASL GG SD LAV+AAFEC
Sbjct: 590 VLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFEC 649
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
WKNAK RG A FCSQYFVS M ML MR QL++EL ++G IP D+SSCS N+R PGI
Sbjct: 650 WKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNSRDPGI 709
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVY 963
+ AVL GLYPMV RL P N RR VETA GAKVR+H S NF LS KK D+ L+V+
Sbjct: 710 LRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDES-LLVF 768
Query: 964 DEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDD---ADENE- 1019
DEITRGDGGMH+RNCTV LPLLL++TEIAVAP ++ DD +++ DD+ A+ NE
Sbjct: 769 DEITRGDGGMHIRNCTVARDLPLLLISTEIAVAPTGSSDSDDSNEEEEDDEEVAANTNEE 828
Query: 1020 ----SDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLS 1075
++E+ M+I K + G +MSSP+ SV +VVDRWL F +TAL++AQ+Y LRERL
Sbjct: 829 VAANTNEEGMDI-HKEESRRGAKMMSSPENSVKLVVDRWLPFRTTALEVAQMYILRERLM 887
Query: 1076 VAILFKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCP 1135
+ILFKVTHP++ LPP L ASM+A+A ILSYDG +G+S P ES+ S + +
Sbjct: 888 ASILFKVTHPREHLPPHLGASMHAIAGILSYDGHAGLSCPPESMVPKHSRTEMYDTG--- 944
Query: 1136 AARNRGTGQNPSNFLMSLMSPNTRQYFPLRDHKSRIPAH 1174
G + P++FL SL ++ L +++ P+H
Sbjct: 945 -----GWEEKPNSFLNSL-------FWSLSLKENKHPSH 971
>gi|5881579|dbj|BAA84364.1| DEIH-box RNA/DNA helicase [Arabidopsis thaliana]
Length = 1538
Score = 1293 bits (3346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/1162 (55%), Positives = 852/1162 (73%), Gaps = 72/1162 (6%)
Query: 14 QKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSK 73
+K++ + + EAT +++L+ F AS ++ Y F+ L+N ER ++H++C+ MG+ SK
Sbjct: 3 KKKKDTKHTRLCEATGAWATKVLEDFRASGNDSYVFEQQLTNSERGIIHQMCRTMGLRSK 62
Query: 74 SSGRGKQRRVSVCK------------------------------SKKRVETDKGK----- 98
S+G G++RR+S+ K SK R ET K
Sbjct: 63 SNGSGEERRLSLFKGDGISKSDKRRMYEARNQKEKEGDGISKSYSKHRYETRFQKAGGIR 122
Query: 99 ------EILPSLTFSEGSKLVLQDLFTHYPPDDGEP-GEKLDANQSRKSDKTRGKRVDIF 151
+ L ++F +K VL DLFT YPP DG+ G L + + + D F
Sbjct: 123 KTRISPKKLKCVSFPPEAKAVLHDLFTRYPPCDGDTTGTSLGIYTT--GNVNSNWKDDFF 180
Query: 152 CKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISG 211
KP M+K +I V SL+SR++K+ + R+I E RSKLPI+SF+D I S V+SNQVVLI+G
Sbjct: 181 KKPHMTKHDIENNVVSLSSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAG 240
Query: 212 ETGCGKTTQVPQFLLEHIW-SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYK 270
ETGCGKTTQVPQ+LL+H+W SK E CKI+CTQPRRISA SV++RIS ERGE IG +GYK
Sbjct: 241 ETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAISVSDRISWERGETIGRTVGYK 300
Query: 271 IRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
+RL+S+GG+ SS+VFCTNG+LLR+L+ +GV+ V +THIIVDEIHERD
Sbjct: 301 VRLQSEGGRESSVVFCTNGILLRVLIGKGVN-----------SSVPDITHIIVDEIHERD 349
Query: 331 RYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
YSDFML I+RD+LPS PHLRLILMSATLDA+RFS+YFGGCPV++VPGFTYPV++F+L+D
Sbjct: 350 SYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDD 409
Query: 391 VLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGS 450
LS+L S +++HL SA + +E+K +LDEAI LAW+NDEFD L++LVS EGS
Sbjct: 410 ALSVLNSDKNSHLLSAV------KRDFKDEDKVSLDEAIDLAWTNDEFDCLVDLVSSEGS 463
Query: 451 PNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEV 510
YNYQ++ TGLTPLMV AGKGRV DVC LLS+GADC LK+K+G TAL+L E+ENQ E
Sbjct: 464 HEAYNYQNSTTGLTPLMVFAGKGRVSDVCKLLSVGADCTLKSKEGITALELAEKENQFET 523
Query: 511 AQIIKKHMENALSDSMK-QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLP 569
AQII++H N S+S + Q LLDKY+AT+ PE +D+ LI +L++KIC DS+DGAILVFLP
Sbjct: 524 AQIIREHAGNIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLP 583
Query: 570 GWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAE 629
GWE+I+KT+++LL + FF ++KF+I+ LHS VP+ +QKKVF RPP GCRKI+L+TNIAE
Sbjct: 584 GWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAE 643
Query: 630 TAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY 689
+A+TIDDVVYVIDSGRMKEKSYDPYN+VSTLQSSWVSKA+AKQRAGRAGRCQAGICYHLY
Sbjct: 644 SAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLY 703
Query: 690 SQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVL 749
S+LRAASLP+++VPE+ R+P++ELCLQVK+LDPNCN+ DFLQK +DPPV+ +I NA+I+L
Sbjct: 704 SKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIIL 763
Query: 750 QDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLP 809
+DIGAL+ +E++TELG+K G L VHP +SKM++FAIL++CLDPAL LACA+D +DPFT+P
Sbjct: 764 KDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMP 823
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMN 869
+SP ++K+A AAK ELASLYG SD LA +AAF+CWKNAK GQ FCS+YF+S VM
Sbjct: 824 LSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMK 883
Query: 870 MLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKN-GR 928
L + ++LQ EL ++G IP S+CS NA PGI+ AV+ GLYPM+ R+ P KN R
Sbjct: 884 RLDDLCRKLQGELNRHGVIPSSSSNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRTR 943
Query: 929 RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
+ET GAKVR+ S N +S K D+ L+V+DEITRGD G+ +R+CTV+ +P+LL
Sbjct: 944 SVIETIAGAKVRVPSLSNNVDMSSTKFDEA-LIVFDEITRGDWGVVIRSCTVLPTIPVLL 1002
Query: 989 LATEIAVAPAPDNEDDDEDDDMSDDDADENESD-EDCMEIDDKTSGQHGENVMSSPDKSV 1047
+ EIAV+ + D SDD+ D + D M+I DK G+ GE +M P+ SV
Sbjct: 1003 FSREIAVSTT-----ESYDAVKSDDEEDHKVGNVGDAMDI-DKEVGRPGEKIMLGPENSV 1056
Query: 1048 TVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
VVVDRWL F TA +IAQ+Y LRERL +ILFKV HP++ LPP L ASMYA+AS+LSYD
Sbjct: 1057 KVVVDRWLPFKVTAFEIAQMYILRERLMASILFKVKHPKENLPPHLGASMYAIASVLSYD 1116
Query: 1108 GFSGISLPAESVESLTSMIQAT 1129
+ S+ +V+ +TS++ AT
Sbjct: 1117 SLAQSSVQTVAVQPITSVVDAT 1138
>gi|15221547|ref|NP_172152.1| nuclear DEIH-boxhelicase [Arabidopsis thaliana]
gi|332189900|gb|AEE28021.1| nuclear DEIH-boxhelicase [Arabidopsis thaliana]
Length = 1576
Score = 1293 bits (3345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/1162 (55%), Positives = 852/1162 (73%), Gaps = 72/1162 (6%)
Query: 14 QKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSK 73
+K++ + + EAT +++L+ F AS ++ Y F+ L+N ER ++H++C+ MG+ SK
Sbjct: 3 KKKKDTKHTRLCEATGAWATKVLEDFRASGNDSYVFEQQLTNSERGIIHQMCRTMGLRSK 62
Query: 74 SSGRGKQRRVSVCK------------------------------SKKRVETDKGK----- 98
S+G G++RR+S+ K SK R ET K
Sbjct: 63 SNGSGEERRLSLFKGDGISKSDKRRMYEARNQKEKEGDGISKSYSKHRYETRFQKAGGIR 122
Query: 99 ------EILPSLTFSEGSKLVLQDLFTHYPPDDGEP-GEKLDANQSRKSDKTRGKRVDIF 151
+ L ++F +K VL DLFT YPP DG+ G L + + + D F
Sbjct: 123 KTRISPKKLKCVSFPPEAKAVLHDLFTRYPPCDGDTTGTSLGIYTT--GNVNSNWKDDFF 180
Query: 152 CKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISG 211
KP M+K +I V SL+SR++K+ + R+I E RSKLPI+SF+D I S V+SNQVVLI+G
Sbjct: 181 KKPHMTKHDIENNVVSLSSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAG 240
Query: 212 ETGCGKTTQVPQFLLEHIW-SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYK 270
ETGCGKTTQVPQ+LL+H+W SK E CKI+CTQPRRISA SV++RIS ERGE IG +GYK
Sbjct: 241 ETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAISVSDRISWERGETIGRTVGYK 300
Query: 271 IRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
+RL+S+GG+ SS+VFCTNG+LLR+L+ +GV+ V +THIIVDEIHERD
Sbjct: 301 VRLQSEGGRESSVVFCTNGILLRVLIGKGVN-----------SSVPDITHIIVDEIHERD 349
Query: 331 RYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
YSDFML I+RD+LPS PHLRLILMSATLDA+RFS+YFGGCPV++VPGFTYPV++F+L+D
Sbjct: 350 SYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDD 409
Query: 391 VLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGS 450
LS+L S +++HL SA + +E+K +LDEAI LAW+NDEFD L++LVS EGS
Sbjct: 410 ALSVLNSDKNSHLLSAV------KRDFKDEDKVSLDEAIDLAWTNDEFDCLVDLVSSEGS 463
Query: 451 PNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEV 510
YNYQ++ TGLTPLMV AGKGRV DVC LLS+GADC LK+K+G TAL+L E+ENQ E
Sbjct: 464 HEAYNYQNSTTGLTPLMVFAGKGRVSDVCKLLSVGADCTLKSKEGITALELAEKENQFET 523
Query: 511 AQIIKKHMENALSDSMK-QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLP 569
AQII++H N S+S + Q LLDKY+AT+ PE +D+ LI +L++KIC DS+DGAILVFLP
Sbjct: 524 AQIIREHAGNIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLP 583
Query: 570 GWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAE 629
GWE+I+KT+++LL + FF ++KF+I+ LHS VP+ +QKKVF RPP GCRKI+L+TNIAE
Sbjct: 584 GWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAE 643
Query: 630 TAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY 689
+A+TIDDVVYVIDSGRMKEKSYDPYN+VSTLQSSWVSKA+AKQRAGRAGRCQAGICYHLY
Sbjct: 644 SAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLY 703
Query: 690 SQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVL 749
S+LRAASLP+++VPE+ R+P++ELCLQVK+LDPNCN+ DFLQK +DPPV+ +I NA+I+L
Sbjct: 704 SKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIIL 763
Query: 750 QDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLP 809
+DIGAL+ +E++TELG+K G L VHP +SKM++FAIL++CLDPAL LACA+D +DPFT+P
Sbjct: 764 KDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMP 823
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMN 869
+SP ++K+A AAK ELASLYG SD LA +AAF+CWKNAK GQ FCS+YF+S VM
Sbjct: 824 LSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMK 883
Query: 870 MLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKN-GR 928
L + ++LQ EL ++G IP S+CS NA PGI+ AV+ GLYPM+ R+ P KN R
Sbjct: 884 RLDDLCRKLQGELNRHGVIPSSSSNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRTR 943
Query: 929 RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
+ET GAKVR+ S N +S K D+ L+V+DEITRGD G+ +R+CTV+ +P+LL
Sbjct: 944 SVIETIAGAKVRVPSLSNNVDMSSTKFDEA-LIVFDEITRGDWGVVIRSCTVLPTIPVLL 1002
Query: 989 LATEIAVAPAPDNEDDDEDDDMSDDDADENESD-EDCMEIDDKTSGQHGENVMSSPDKSV 1047
+ EIAV+ + D SDD+ D + D M+I DK G+ GE +M P+ SV
Sbjct: 1003 FSREIAVSTT-----ESYDAVKSDDEEDHKVGNVGDAMDI-DKEVGRPGEKIMLGPENSV 1056
Query: 1048 TVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
VVVDRWL F TA +IAQ+Y LRERL +ILFKV HP++ LPP L ASMYA+AS+LSYD
Sbjct: 1057 KVVVDRWLPFKVTAFEIAQMYILRERLMASILFKVKHPKENLPPHLGASMYAIASVLSYD 1116
Query: 1108 GFSGISLPAESVESLTSMIQAT 1129
+ S+ +V+ +TS++ AT
Sbjct: 1117 SLAQSSVQTVAVQPITSVVDAT 1138
>gi|6692694|gb|AAF24828.1|AC007592_21 F12K11.4 [Arabidopsis thaliana]
Length = 1760
Score = 1273 bits (3294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/1188 (54%), Positives = 857/1188 (72%), Gaps = 88/1188 (7%)
Query: 4 KKQKKAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHE 63
+++K + +K++ + + EAT +++L+ F AS ++ Y F+ L+N ER ++H+
Sbjct: 161 REKKPLKAMAKKKKDTKHTRLCEATGAWATKVLEDFRASGNDSYVFEQQLTNSERGIIHQ 220
Query: 64 VCKKMGMTSKSSGRGKQRRVSVCK------------------------------SKKRVE 93
+C+ MG+ SKS+G G++RR+S+ K SK R E
Sbjct: 221 MCRTMGLRSKSNGSGEERRLSLFKGDGISKSDKRRMYEARNQKEKEGDGISKSYSKHRYE 280
Query: 94 TDKGK-----------EILPSLTFSEGSKLVLQDLFTHYPPDDGEP-GEKLDANQSRKSD 141
T K + L ++F +K VL DLFT YPP DG+ G L + +
Sbjct: 281 TRFQKAGGIRKTRISPKKLKCVSFPPEAKAVLHDLFTRYPPCDGDTTGTSLGIYTT--GN 338
Query: 142 KTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ----------IVEERSKLPIS 191
+ D F KP M+K +I V SL+SR++K+ + R+ I E RSKLPI+
Sbjct: 339 VNSNWKDDFFKKPHMTKHDIENNVVSLSSRLKKERHFREVSSYMYFQKIIFEARSKLPIA 398
Query: 192 SFKDVITSTVDSNQV---VLISGETGCGKTTQVPQFLLEHIW-SKGETCKIVCTQPRRIS 247
SF+D I S V+SNQV VLI+GETGCGKTTQVPQ+LL+H+W SK E CKI+CTQPRRIS
Sbjct: 399 SFRDAIISAVESNQVIWVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRIS 458
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
A SV++RIS ERGE IG +GYK+RL+S+GG+ SS+VFCTNG+LLR+L+ +GV+
Sbjct: 459 AISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVN------ 512
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL---ILMSATLDADRF 364
V +THIIVDEIHERD YSDFML I+RD+LPS PHLRL ILMSATLDA+RF
Sbjct: 513 -----SSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLVGYILMSATLDAERF 567
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKST 424
S+YFGGCPV++VPGFTYPV++F+L+D LS+L S +++HL SA + +E+K +
Sbjct: 568 SEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNSDKNSHLLSAV------KRDFKDEDKVS 621
Query: 425 LDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSL 484
LDEAI LAW+NDEFD L++LVS EGS YNYQ++ TGLTPLMV AGKGRV DVC LLS+
Sbjct: 622 LDEAIDLAWTNDEFDCLVDLVSSEGSHEAYNYQNSTTGLTPLMVFAGKGRVSDVCKLLSV 681
Query: 485 GADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK-QQLLDKYLATVNPELI 543
GADC LK+K+G TAL+L E+ENQ E AQII++H N S+S + Q LLDKY+AT+ PE +
Sbjct: 682 GADCTLKSKEGITALELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEEV 741
Query: 544 DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVP 603
D+ LI +L++KIC DS+DGAILVFLPGWE+I+KT+++LL + FF ++KF+I+ LHS VP
Sbjct: 742 DVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVP 801
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+ +QKKVF RPP GCRKI+L+TNIAE+A+TIDDVVYVIDSGRMKEKSYDPYN+VSTLQSS
Sbjct: 802 AEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSS 861
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 723
WVSKA+AKQRAGRAGRCQAGICYHLYS+LRAASLP+++VPE+ R+P++ELCLQVK+LDPN
Sbjct: 862 WVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPN 921
Query: 724 CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
CN+ DFLQK +DPPV+ +I NA+I+L+DIGAL+ +E++TELG+K G L VHP +SKM++F
Sbjct: 922 CNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYF 981
Query: 784 AILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFE 843
AIL++CLDPAL LACA+D +DPFT+P+SP ++K+A AAK ELASLYG SD LA +AAF+
Sbjct: 982 AILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQ 1041
Query: 844 CWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG 903
CWKNAK GQ FCS+YF+S VM L + ++LQ EL ++G IP S+CS NA PG
Sbjct: 1042 CWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLNAHDPG 1101
Query: 904 IIHAVLMAGLYPMVARLRPPHKN-GRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMV 962
I+ AV+ GLYPM+ R+ P KN R +ET GAKVR+ S N +S K D+ L+V
Sbjct: 1102 ILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNNVDMSSTKFDEA-LIV 1160
Query: 963 YDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESD- 1021
+DEITRGD G+ +R+CTV+ +P+LL + EIAV+ + D SDD+ D +
Sbjct: 1161 FDEITRGDWGVVIRSCTVLPTIPVLLFSREIAVSTT-----ESYDAVKSDDEEDHKVGNV 1215
Query: 1022 EDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFK 1081
D M+I DK G+ GE +M P+ SV VVVDRWL F TA +IAQ+Y LRERL +ILFK
Sbjct: 1216 GDAMDI-DKEVGRPGEKIMLGPENSVKVVVDRWLPFKVTAFEIAQMYILRERLMASILFK 1274
Query: 1082 VTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQAT 1129
V HP++ LPP L ASMYA+AS+LSYD + S+ +V+ +TS++ AT
Sbjct: 1275 VKHPKENLPPHLGASMYAIASVLSYDSLAQSSVQTVAVQPITSVVDAT 1322
>gi|413952304|gb|AFW84953.1| hypothetical protein ZEAMMB73_997107 [Zea mays]
Length = 985
Score = 1219 bits (3154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/883 (65%), Positives = 724/883 (81%), Gaps = 13/883 (1%)
Query: 26 EATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSV 85
EAT +R+S+ L+ F AS EVYTF+ ++S +ERA +HE+C+KMGM SKSSG G++RR+SV
Sbjct: 100 EATLVRVSKALEDFRASNAEVYTFEPDISKQERAAIHEMCRKMGMISKSSGNGERRRLSV 159
Query: 86 CKSKKRVETDKGKEIL--PS-LTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDK 142
K K++ +G E+ PS L FSE ++ VLQDLF HYPP D + +D + S K+
Sbjct: 160 YKRKQK----RGPELEQGPSYLGFSEEARHVLQDLFMHYPPGDADLSGDVDQSSSDKAAN 215
Query: 143 TRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
+ + + FC+P MSK +I KVE L S+I LR+++E+R+KLPISSFKDVITST++
Sbjct: 216 IKWRTDNAFCRPAMSKLDITKKVEMLASKINGSEQLRKVMEDRTKLPISSFKDVITSTLE 275
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
++QVVLISG+TGCGKTTQVPQ++L+H+W KGE+CKI+CTQPRRISA SVAERIS ERGE
Sbjct: 276 NHQVVLISGQTGCGKTTQVPQYILDHMWGKGESCKIICTQPRRISAISVAERISAERGEA 335
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD-VSALTHI 321
+GD +GYKIRLESKGGK+SS++FCTNGVLLRLL+ +G + K + K + DD V +THI
Sbjct: 336 VGDTVGYKIRLESKGGKNSSVLFCTNGVLLRLLIGRGTNASKARNQKRSLDDAVLGITHI 395
Query: 322 IVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTY 381
IVDEIHERDR+SDFML I+RD+LP YPHLR++LMSAT+DA+RFSQYF GC VIQVPGFTY
Sbjct: 396 IVDEIHERDRFSDFMLTILRDLLPLYPHLRMVLMSATIDAERFSQYFNGCSVIQVPGFTY 455
Query: 382 PVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDML 441
PVK+FYLEDVLSIL+SA NHL S E LT + KS++D++I+LA NDEFD L
Sbjct: 456 PVKTFYLEDVLSILQSAGDNHLTSHK----TEGSVLTHDFKSSMDDSINLALVNDEFDPL 511
Query: 442 LELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQL 501
LEL+S E + VYNYQH+ TG+TPLMV A KG++GDVCMLLS G DC + DG++AL
Sbjct: 512 LELISAEQNTEVYNYQHSETGITPLMVFAMKGQLGDVCMLLSFGVDCSAQDHDGKSALDW 571
Query: 502 GEQENQPEVAQIIKKHMENALSDSMK-QQLLDKYLATVNPELIDLVLIEQLLRKICMDSE 560
+QENQ EV ++IKKHME + S + +LL+KYLA++NPE ID +LIE+LLRKIC+DS
Sbjct: 572 AQQENQQEVCEVIKKHMECSSEKSTEDNELLNKYLASINPEHIDTLLIERLLRKICVDSN 631
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
+GAILVFLPGWEDI++TR+RL A+PFF+D+S+F+++ LHSM+PS +QKKVFKRPP G RK
Sbjct: 632 EGAILVFLPGWEDISQTRERLFASPFFQDSSRFLVLSLHSMIPSSEQKKVFKRPPVGVRK 691
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
IILSTNIAETA+TIDDVV+VIDSGRMKEKSYDPYNNVSTL +SWVSKASA+QR GRAGRC
Sbjct: 692 IILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHASWVSKASARQREGRAGRC 751
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSV 740
Q G CYHLYS+ RA+SLPD+Q+PEIKR+PIEELCLQVKLLD NC I DFL+KTLDPP+
Sbjct: 752 QPGTCYHLYSRFRASSLPDYQIPEIKRMPIEELCLQVKLLDSNCRIADFLKKTLDPPIPE 811
Query: 741 TIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACAS 800
T+RNAI VLQD+GAL+ DE++TELGEKLG L VHP +KML FAILM+CLDPALTLACA+
Sbjct: 812 TVRNAIAVLQDLGALTQDEQLTELGEKLGSLPVHPSTTKMLLFAILMNCLDPALTLACAA 871
Query: 801 DYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQ 860
DYRDPF LP++P+E+KRA AAK ELASLYGG SDQLAV+AAF+ W++AK RGQ++ FC++
Sbjct: 872 DYRDPFVLPVAPDERKRAAAAKVELASLYGGFSDQLAVVAAFDFWRHAKDRGQDSQFCAK 931
Query: 861 YFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG 903
YFVSS +MNML MRKQLQ EL + GF+P D S+CS N++ PG
Sbjct: 932 YFVSSNIMNMLSSMRKQLQNELSQRGFVPADASACSLNSKDPG 974
>gi|168022099|ref|XP_001763578.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685371|gb|EDQ71767.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1143
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/1123 (51%), Positives = 782/1123 (69%), Gaps = 48/1123 (4%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
VAEA RI I L+ F AS +E F+A+LSN +RAVVH+ CKK+G+ SKS G G RRV
Sbjct: 27 VAEADRISIVDRLNQFKASNEEELIFEADLSNHDRAVVHDTCKKLGLKSKSRGYGDDRRV 86
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPP-------DDGEPGEKLDANQ 136
+V K +R LTFS S +L DLF +PP + EP +
Sbjct: 87 AVFKPSQRTGIKPASAT--PLTFSPASYEILADLFQRHPPVEDELLANKWEPPAITSTSS 144
Query: 137 SRKSDKTRGKRVDIFCKPK---MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSF 193
S S K + + K M+ ++ + +L SRI+K L++I E+RS LPI+SF
Sbjct: 145 SAVSKKESNRHYNRGKASKQWTMNPGDVVRQAAALASRIQKQPALQKIAEKRSTLPIASF 204
Query: 194 KDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAE 253
KD IT+ VD +QVVLI+GETGCGKTTQVPQ++L+H+WS+ + C+I+CTQPRRISATSVAE
Sbjct: 205 KDEITAVVDKHQVVLIAGETGCGKTTQVPQYILDHMWSQNKPCRIICTQPRRISATSVAE 264
Query: 254 RISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKE-ASNKPAK 312
RI+ ERGEN+G+ +GY+IRLESKGG+HSS++FCTNGVLLR LV G +LKE S
Sbjct: 265 RIAAERGENVGNTVGYQIRLESKGGRHSSLMFCTNGVLLRKLVGSGRLKLKENESVLDES 324
Query: 313 DDVSAL--THIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG 370
++ S L TH+IVDEIHERDR +DF+L ++RD+L P+LRLILMSATLDAD FS YF
Sbjct: 325 EEFSGLDATHVIVDEIHERDRNADFLLIVLRDLLALKPNLRLILMSATLDADLFSSYFNN 384
Query: 371 CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAIS 430
CPV++VPGFT+PV+++YLEDVL++ ++ +S++ + + + LTEE+ ++DEAI
Sbjct: 385 CPVVRVPGFTFPVRTYYLEDVLALTENQQSSNQNGRN---SEKKLSLTEEDVQSMDEAIQ 441
Query: 431 LAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQL 490
LAW D+F+ L++ + N+ NY+H+LTG T LMV AGKGRV DV +LLSLGAD
Sbjct: 442 LAWLEDDFETLMDTIEEFPRLNLCNYKHSLTGATALMVSAGKGRVEDVKLLLSLGADISA 501
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHM---ENALSDSMKQQLLDKYLATVNPELIDLVL 547
A +G TA + Q EV I+ +HM + A + + LL Y + + + ID+ L
Sbjct: 502 AANNGHTAFDWAKNNGQEEVVSILTEHMVKVQQAQFQAAETALLQNYQMSADQDEIDVAL 561
Query: 548 IEQLLRKIC------MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
IE+LL ++ +D++ GA+LVFLPGWEDI++ R+ L +P F + S+F+++PLHS+
Sbjct: 562 IERLLHRLHEAAGERLDTQ-GAVLVFLPGWEDISRLRECLQVSPIFGNPSRFLLLPLHSL 620
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
VPS +Q+KVF+ PP G KI+L+TNIAETAITIDD+VYVID+GRMKEKSYDPY+NVSTLQ
Sbjct: 621 VPSSEQRKVFQSPPSGVCKIVLATNIAETAITIDDIVYVIDTGRMKEKSYDPYSNVSTLQ 680
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+ W+SKASAKQR GRAGRCQ G+CYHL+S+LR +LP+FQ+PEIKR P+EELCLQVKL +
Sbjct: 681 TVWISKASAKQREGRAGRCQPGVCYHLFSRLRMQALPEFQLPEIKRTPLEELCLQVKLYE 740
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
P+ I +F+ + LDPP+ + +RNA+ +LQDIGAL+ DE +TE+G++LG L VHP S+M+
Sbjct: 741 PHGRIAEFILRALDPPLEIAVRNAVTLLQDIGALTSDELLTEMGKQLGSLPVHPSTSRMI 800
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
AIL++CLDPALT+ACA+ +RDPF LP+ P +KK+A A+ ELA++YGG SD L+++AA
Sbjct: 801 LLAILLNCLDPALTVACAAGFRDPFVLPLHPYQKKQAQHARQELAAMYGGSSDHLSIVAA 860
Query: 842 FECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARV 901
F+ W+NA+ GQE+ FCS+YFVS G M L GMR+QLQ EL++ GFI + CS NAR
Sbjct: 861 FDRWENARVNGQESNFCSRYFVSGGTMFQLAGMRQQLQGELVQKGFIKMEPHPCSLNARD 920
Query: 902 PGIIHAVLMAGLYPMVARLRPP-HKNGRRFVETAGGAKVRLHPHSLNFK----LSFKKTD 956
PGI+ AVL AG+YPMV L PP + + V+TA G KVR+HPHS++ + S +T
Sbjct: 921 PGIVRAVLAAGMYPMVGNLLPPLPGSAKAIVQTARGEKVRIHPHSISIQPNELASMDQTK 980
Query: 957 -DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDA 1015
+ L+V+DE+TRG+ ++VR CT++ P PL+LL+TE+ + PD + E +
Sbjct: 981 LNQLLVVFDEVTRGEAQVYVRKCTLITPHPLILLSTEMVIT-FPDGK---ESAALEPSSV 1036
Query: 1016 DENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLS 1075
E S E QH +MSS D V+VVVDR YF STALD AQ++ LR R++
Sbjct: 1037 KERPSRE--------VPAQH--RLMSSADALVSVVVDRRFYFSSTALDGAQLFVLRSRMN 1086
Query: 1076 VAILFKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAES 1118
A+ FKVT P+ LP VL S++A+A ILS+D ++LP+ S
Sbjct: 1087 AALNFKVTQPRLYLPAVLADSVHAIACILSFDAMPAMALPSTS 1129
>gi|302793863|ref|XP_002978696.1| hypothetical protein SELMODRAFT_50132 [Selaginella moellendorffii]
gi|300153505|gb|EFJ20143.1| hypothetical protein SELMODRAFT_50132 [Selaginella moellendorffii]
Length = 908
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/939 (52%), Positives = 680/939 (72%), Gaps = 50/939 (5%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIV 239
Q+ E KLPI F+DVIT+TVD N+VV+I+GETGCGK+TQVPQ+LL+H+W +G++C++V
Sbjct: 9 QLTETTQKLPIWKFRDVITTTVDQNKVVIIAGETGCGKSTQVPQYLLDHMWGQGKSCRVV 68
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRRISATSVA+RI+ ERGE IG+ +GY+IRLES+GG HSS++FCTNGVLLR LV+
Sbjct: 69 CTQPRRISATSVADRIATERGEAIGETVGYQIRLESRGGPHSSLMFCTNGVLLRKLVT-- 126
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
AK+ + THIIVDEIHERD +DF+L +++ +L + P LRL+LMSATL
Sbjct: 127 -----------AKEAGVSATHIIVDEIHERDCNADFLLIVLKGLLLAQPDLRLVLMSATL 175
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPEL-T 418
DA+ FS YF CPV+++PGFT+PV +YLEDVLS+ + SA P D L +
Sbjct: 176 DAELFSSYFNNCPVLKIPGFTHPVTVYYLEDVLSMTNFEANARKRSAE---PAADSLLLS 232
Query: 419 EENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDV 478
EE+ +D A++ AW +D+F+ LL LV+ P V +YQH+ TG+T LMV AGKGRV DV
Sbjct: 233 EEDADEMDNALTCAWLDDDFEQLLSLVTENPRPEVVDYQHSSTGITALMVAAGKGRVEDV 292
Query: 479 CMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENAL---SDSMKQQLLDKYL 535
+LLSLG+ C L +++G+TAL + E + E A+ I++H++ A + + ++L KY
Sbjct: 293 GVLLSLGSSCSLVSQEGQTALDMAESNGEEEAAETIREHIKQAAEVQTAEKEAEILGKYH 352
Query: 536 ATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVI 595
+V+ E +D++LIE+LL IC D DGA+LVFLPGWEDI + RD+L+A+PF+ D ++F+I
Sbjct: 353 GSVDQEEVDILLIERLLHTICSDPGDGAVLVFLPGWEDITRCRDQLMASPFYSDETRFLI 412
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
+PLHSM+P QKK+F +PPPG RKI+L+TNIAE+AITIDDVVYVIDSGRMKEKSYDPY
Sbjct: 413 LPLHSMIPMSDQKKIFTKPPPGARKIVLATNIAESAITIDDVVYVIDSGRMKEKSYDPYT 472
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
NVST Q++WVSKASA+QR GRAGRC+AG CYHL+S++RAASL DFQ+PE+KR P+EE+CL
Sbjct: 473 NVSTFQTTWVSKASARQRQGRAGRCRAGFCYHLFSKVRAASLADFQLPEMKRTPLEEVCL 532
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
+VKLL P ++ DFL LDPP+ ++I+NA+ +LQDIGAL+ +++ELG++LG L VHP
Sbjct: 533 KVKLLQPRGDVRDFLSSALDPPLDISIQNAMSLLQDIGALTPAGELSELGQQLGSLPVHP 592
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
SKML +IL++CLDPALT+ACA+ YRDPF LP++P+ K+ A AAK LAS YGG SD
Sbjct: 593 ATSKMLLLSILLNCLDPALTIACAAGYRDPFVLPMAPHLKREAFAAKNHLASKYGGYSDH 652
Query: 836 LAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC 895
LAV+AAF+ W+ A++RGQ+ FCSQY +S GVMNML GMRKQL EL GF+ D C
Sbjct: 653 LAVVAAFDGWEAARKRGQDYSFCSQYSLSPGVMNMLDGMRKQLLRELTLKGFVKRDPRPC 712
Query: 896 SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV-ETAGGAKVRLHPHSLNFKLSFKK 954
S NA+ PGI+ A+L A LYP VAR+ PP ++GR+ + + A G KVR+HP S NF+L ++
Sbjct: 713 SLNAKDPGIVRAILSACLYPSVARILPPDESGRKVIAQIARGEKVRIHPQSSNFRLLVQQ 772
Query: 955 ------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDD 1008
+ L+V+DE+TRG+ +++RN T V P PLL TE++VAP +++ +
Sbjct: 773 QFPDLNVYNDHLLVFDEVTRGESQVYIRNNTCVKPHPLLFFCTELSVAPLRSYREEEYE- 831
Query: 1009 DMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIY 1068
+G +M + D ++ +V+DRWL + ++++ AQ+Y
Sbjct: 832 ----------------------MAGPAERELMEAADDTLAMVIDRWLKYQTSSVMAAQVY 869
Query: 1069 CLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
CLRERL A+LFKV +P LP +L AS++A+A + SY+
Sbjct: 870 CLRERLLSALLFKVKNPSANLPDMLAASVHALACVFSYE 908
>gi|302805745|ref|XP_002984623.1| hypothetical protein SELMODRAFT_40134 [Selaginella moellendorffii]
gi|300147605|gb|EFJ14268.1| hypothetical protein SELMODRAFT_40134 [Selaginella moellendorffii]
Length = 908
Score = 976 bits (2524), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/940 (52%), Positives = 680/940 (72%), Gaps = 52/940 (5%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIV 239
Q+ E KLPI F+DVIT+TVD N+VV+I+GETGCGK+TQVPQ+LL+H+W +G++C++V
Sbjct: 9 QLTETTQKLPIWKFRDVITTTVDQNKVVIIAGETGCGKSTQVPQYLLDHMWGQGKSCRVV 68
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRRISATSVA+RI+ ERGE IG+ +GY+IRLES+GG HSS++FCTNGVLLR LV+
Sbjct: 69 CTQPRRISATSVADRIATERGEAIGETVGYQIRLESRGGPHSSLMFCTNGVLLRKLVT-- 126
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
AK+ + THIIVDEIHERD +DF+L +++ +L + P LRL+LMSATL
Sbjct: 127 -----------AKEAGVSATHIIVDEIHERDCNADFLLIVLKGLLLAQPDLRLVLMSATL 175
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK-SAESNHLDSASLIVPNEDPEL- 417
DA+ FS YF CPV+++PGFT+PV +YLEDVLSI A + L + P D L
Sbjct: 176 DAELFSSYFNNCPVLKIPGFTHPVTVYYLEDVLSITNFEANARKLTAE----PAADSLLL 231
Query: 418 TEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGD 477
+EE+ +D A++ AW +D+F+ LL LV+ P V +YQH+ TG+T LMV AGKGRV D
Sbjct: 232 SEEDADEMDNALTCAWLDDDFEQLLSLVTENPRPEVVDYQHSSTGITALMVAAGKGRVED 291
Query: 478 VCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENAL---SDSMKQQLLDKY 534
V +LL LG+ C L +++G+TAL + E + E A+ I++H++ A + + ++L KY
Sbjct: 292 VGVLLLLGSSCSLVSQEGQTALDMAESNGEEEAAETIREHIKQATEVQTAEKEAEILGKY 351
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+V+ E +D++LIE+LL IC D DGA+LVFLPGWEDI + RD+L+A+PF+ D ++F+
Sbjct: 352 HGSVDQEEVDILLIERLLHTICSDPGDGAVLVFLPGWEDITRCRDQLMASPFYSDETRFL 411
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHSM+P QKK+F +PPPG RKI+L+TNIAE+AITIDDVVYVIDSGRMKEKSYDPY
Sbjct: 412 ILPLHSMIPMSDQKKIFTKPPPGARKIVLATNIAESAITIDDVVYVIDSGRMKEKSYDPY 471
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NVST Q++WVSKASA+QR GRAGRC+AG CYHL+S++RAASL DFQ+PE+KR P+EE+C
Sbjct: 472 TNVSTFQTTWVSKASARQRQGRAGRCRAGFCYHLFSKVRAASLADFQLPEMKRTPLEEVC 531
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L+VKLL P ++ DFL LDPP+ ++I+NA+ +LQDIGAL+ +++ELG++LG L VH
Sbjct: 532 LKVKLLQPRGDVRDFLSSALDPPLDISIQNAMSLLQDIGALTPAGELSELGQQLGSLPVH 591
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P SKML +IL++CLDPALT+ACA+ YRDPF LP++P+ K+ A AAK LAS YGG SD
Sbjct: 592 PATSKMLLLSILLNCLDPALTIACAAGYRDPFVLPMAPHLKREAFAAKNHLASKYGGYSD 651
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LAV+AAF+ W+ A++RGQE FCSQY +S GVMNML GMRKQL EL GF+ D
Sbjct: 652 HLAVVAAFDGWEAARKRGQEYSFCSQYSLSPGVMNMLDGMRKQLLRELTLKGFVKRDPRP 711
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV-ETAGGAKVRLHPHSLNFKLSFK 953
CS NA+ PGI+ A+L A LYP VAR+ PP ++GR+ + + A G KVR+HP S NF+L +
Sbjct: 712 CSLNAKDPGIVRAILSACLYPSVARILPPDESGRKVIAQIARGEKVRIHPQSSNFRLLVQ 771
Query: 954 K------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDED 1007
+ + L+V++E+TRG+ +++RN T V P PLL TE++VAP +++ +
Sbjct: 772 QQFPDLNVYNDHLLVFEEVTRGESQVYIRNNTCVKPHPLLFFCTELSVAPLRSYREEEYE 831
Query: 1008 DDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQI 1067
+G +M + D ++ +V+DRWL + ++++ AQ+
Sbjct: 832 -----------------------MAGPAERELMEAADDTLAMVIDRWLKYQTSSVMAAQV 868
Query: 1068 YCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
YCLRERL A+LFKV +P LP +L AS++A+A + SY+
Sbjct: 869 YCLRERLLSALLFKVKNPSANLPDMLAASVHALACVFSYE 908
>gi|110741780|dbj|BAE98834.1| hypothetical protein [Arabidopsis thaliana]
Length = 636
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/633 (64%), Positives = 496/633 (78%), Gaps = 19/633 (3%)
Query: 22 PTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQR 81
PT EATRI +++++ F AS +EVYTF+ NLSN ER V+H++C+KMG+ SKSSGRG+QR
Sbjct: 15 PTSVEATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQR 74
Query: 82 RVSVCKS------KKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDAN 135
R+S+ KS K KE L ++F G+ ++LQ+LFTHYPP DG+
Sbjct: 75 RLSIFKSRHKNGNKNEANEKSNKEKLKCVSFPPGADVILQELFTHYPPCDGDTAATSFTK 134
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKD 195
S K + D F KP++S EI KV SL+SR++KD L++I + RSKLPI+SFKD
Sbjct: 135 YSGNKGKQGQWKDDFFRKPQISSEEILEKVASLSSRLKKDKALKEITKLRSKLPITSFKD 194
Query: 196 VITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIVCTQPRRISATSVAER 254
ITS V+SNQV+LISGETGCGKTTQVPQ+LL+H+WS K ETCKIVCTQPRRISA SV+ER
Sbjct: 195 AITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSVSER 254
Query: 255 ISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
IS ERGE+IG+NIGYK+RL+SKGG+HSS+VFCTNG+LLR+LV +G +
Sbjct: 255 ISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG-----------SVSS 303
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
VS +THIIVDEIHERD YSDFMLAIIRD+LPS PHLRLILMSATLDA+RFS YFGGCPV+
Sbjct: 304 VSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVV 363
Query: 375 QVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWS 434
+VPGFTYPV++ YLEDVLSILKS NHL S +L + + +LT+E+K LDEAI LAW+
Sbjct: 364 RVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSISDHKLDLTDEDKLALDEAIILAWT 423
Query: 435 NDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKD 494
NDEFD LL+LVS GS +YNYQH T LTPLMV AGKGR+ DVCMLLS GAD LK+KD
Sbjct: 424 NDEFDALLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGRISDVCMLLSFGADWSLKSKD 483
Query: 495 GRTALQLGEQENQPEVAQIIKKHME-NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLR 553
G TAL+L E ENQ E AQII++H + + + QQLLDKY+AT+NPE +D+ LI+QL+R
Sbjct: 484 GMTALELAEAENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATINPEQVDVSLIQQLMR 543
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
KIC DSEDGAILVFLPGW+DINKTR RLL NPFF D++KF II LHSMVP+ +QKKVF R
Sbjct: 544 KICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNR 603
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
PPPGCRKI+L+TNIAE+A+TIDDVVYVIDSGRM
Sbjct: 604 PPPGCRKIVLATNIAESAVTIDDVVYVIDSGRM 636
>gi|384247114|gb|EIE20602.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 1212
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/1145 (40%), Positives = 667/1145 (58%), Gaps = 97/1145 (8%)
Query: 36 LDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETD 95
+ GF+ S Y F LSN +RAVVH C+K G TSKS G+ R+V+V K
Sbjct: 1 MGGFVQS----YVFPPGLSNHDRAVVHAECRKYGFTSKSQGKNDNRQVTVYKPAASGRLV 56
Query: 96 KGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGE--------KLDANQSRKSDKTRGKR 147
K LP + S VLQ + +PP D E L A + + + G++
Sbjct: 57 KEAFDLP---IAPASLDVLQAYYERHPPSDAELAAAMQGGAVASLGAAEHQVHQQVSGRK 113
Query: 148 VDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVV 207
E + + +R ++ + I R+ LPI+ +++ I + +NQVV
Sbjct: 114 RRSTVGAAHFPEEEVRRHHAAWARAQQTPAVAAITATRNALPIAPYRNQILQAIANNQVV 173
Query: 208 LISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNI 267
L++GETGCGKTTQVPQFLLE W+ G C+I+CTQPRRISA S+AER++ ERGE G ++
Sbjct: 174 LVAGETGCGKTTQVPQFLLEDAWAAGRGCRIMCTQPRRISAISIAERVAAERGEKCGTSV 233
Query: 268 GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
GY IRLESKGG SS++FCTNGVLLR+L +QG + + +THIIVDEIH
Sbjct: 234 GYTIRLESKGGPGSSLMFCTNGVLLRML-TQG-------------EGLDDITHIIVDEIH 279
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ERDR++DF+L ++RD+L ++P+LR++LMSATL + FS YFGGCPVI+VPGFTYPV Y
Sbjct: 280 ERDRFADFLLILLRDLLLAHPNLRVVLMSATLHIELFSNYFGGCPVIEVPGFTYPVTDMY 339
Query: 388 LEDVLSIL---------KSAESNHLDSASLIVPN----EDPELTEENKSTLDEAISLAW- 433
LEDVL ++ + S+ ++ P E ++ +E + ++ AI A+
Sbjct: 340 LEDVLRLIGYQDALLAQQDGNSSRRGHGGILPPAPNRAEPSDIPKEQREAIESAIMQAFL 399
Query: 434 --SNDEFDMLLELVSLEG-----SPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGA 486
++ FD LLE+ S N H TG T LM AGKGR+ DV LL+ GA
Sbjct: 400 HGDDEHFDHLLEMTGANSMDEACSTACLNVTHMSTGATALMAAAGKGRLEDVAALLTAGA 459
Query: 487 DCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQ---LLDKYLATVNPELI 543
D L+++DG +A + EVA + HME A + S + + +Y A+ + + +
Sbjct: 460 DPLLRSRDGSSAQDWATKFGHSEVADFLSSHMEVAQTSSHAEVSALAVSRYQASTDADEV 519
Query: 544 DLVLIEQLLRKICMD----------SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
DL LIE LL IC + + GA+L+FLPGW++I + +++L SK+
Sbjct: 520 DLSLIEALLMYICGEGPYSRAEEQGASLGAVLIFLPGWDEIIRLKEQLEGRQSALSGSKY 579
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+++PLHSMVP+ +Q+KVFKR P G RKI+L+TNIAETA+TIDD+V VI+SGR KEKSYDP
Sbjct: 580 MVLPLHSMVPAAEQRKVFKRAPVGVRKIVLATNIAETAVTIDDIVCVINSGRHKEKSYDP 639
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
Y NVSTLQ++W+SKAS +QR GRAGRCQ G+C+HLYS++R+ L DFQ+PE++R P++EL
Sbjct: 640 YTNVSTLQATWISKASERQRRGRAGRCQQGVCFHLYSRVRSEGLADFQLPELQRSPLDEL 699
Query: 714 CLQVKLLD----PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-DEKVTELGEKL 768
LQVKLL+ + ++ +FL K ++PP +V++ NA+ +LQDIGA E++T LG L
Sbjct: 700 SLQVKLLEGAGFGHTSVAEFLDKAVEPPPAVSVANAVRLLQDIGAFEAPGERLTLLGRHL 759
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L + P + KML + +L CLDP LT++C YRDP+ LPI ++ A+AAK L+
Sbjct: 760 AALPLPPRIGKMLLYGVLFGCLDPILTVSCCMAYRDPWVLPIEATARRAASAAKQTLSDG 819
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
GG SD LA++ A+ W K RG+E + + +S G M M+ GMR QL EL GF+
Sbjct: 820 AGGCSDHLALVRAYNTWSAEKGRGREYAYAAATHISGGTMCMIEGMRGQLLGELTARGFV 879
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARL--------RPPHKNGRRFVETAGGAKVR 940
+ + S NAR G++ +V+ AG YP+V RL + P K+ + TA KV+
Sbjct: 880 -SSLDAASVNARDVGLVRSVMAAGFYPLVGRLLSKKLERGQAPRKSAH--ILTAKEEKVK 936
Query: 941 LHPHSLNFKLS---FKKTD--DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+HP S+NF+L +K + CP+++++E+TR + + VR CT V P L L+A + V
Sbjct: 937 IHPSSVNFQLDAPVVRKGEPRPCPIIIFEEVTRNESVLAVRQCTAVNPHVLPLVAASLRV 996
Query: 996 APAPDNEDDDEDDDMSDDDAD-ENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRW 1054
A + ED D SD D D N +DD E++ + + +D W
Sbjct: 997 --AGEVEDSDMGGWNSDSDGDGANGLPSGPAWVDD-------EDMEEGMGPATQLEIDGW 1047
Query: 1055 LYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGF---SG 1111
L A + CLR+RL+ KV++P+ L ++ AS+ S + SG
Sbjct: 1048 LSLRVPTAAAAPLLCLRQRLNTCFAAKVSNPRGVLDEAHAGALQTAASLFSLEAGGPESG 1107
Query: 1112 ISLPA 1116
SL A
Sbjct: 1108 FSLEA 1112
>gi|308800944|ref|XP_003075253.1| putative DEIH-box RNA/DNA helicase (ISS) [Ostreococcus tauri]
gi|116061807|emb|CAL52525.1| putative DEIH-box RNA/DNA helicase (ISS) [Ostreococcus tauri]
Length = 1240
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/1130 (38%), Positives = 645/1130 (57%), Gaps = 98/1130 (8%)
Query: 24 VAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRR 82
V E RI I++ L+ F A + F N+ N RAVVH CKK+G+ SKS G+G RR
Sbjct: 20 VTELARIDIAKALEDFRADPNASELEFPPNVDNHFRAVVHAECKKLGLKSKSHGKGDDRR 79
Query: 83 VSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDAN------- 135
V V K++ D E L L + +++ F P + E + +
Sbjct: 80 VRVTKAEAFRPDDA--EDLFDLGLGARAAAAMEEYFEKAPQSEAEIRRSVAGSVGDFDGD 137
Query: 136 ---QSRKSDKTRGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPIS 191
++R K R + + + + + E + ++L RI DA L ++ ++R+ LP++
Sbjct: 138 GEREARVKTKKRSYKGGVEMRGRAIDAGEATRRADALAGRIRSDAALGELQKKRAALPVA 197
Query: 192 SFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSV 251
F+D I + V ++QV L++G TGCGKTTQVPQ+LL+ W+ G IVCTQPRRISA +V
Sbjct: 198 KFRDDILNAVRNHQVTLVAGSTGCGKTTQVPQYLLDDAWASGSGAAIVCTQPRRISAMTV 257
Query: 252 AERISVERGENIGDN-IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKP 310
+ERI+ ERGE+IG + +GY+IRLES+ S++FCT+GVLLR L S E S+K
Sbjct: 258 SERIANERGESIGQSTVGYQIRLESRVAADCSLLFCTSGVLLRKLTS-------ETSDKT 310
Query: 311 AKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG 370
+ ALTHII+DE+HERD ++DF+ I+R +LP +PHL+L+LMSAT+ D FS YFGG
Sbjct: 311 CE----ALTHIIIDELHERDLFADFLTIILRQVLPKHPHLKLVLMSATMREDLFSNYFGG 366
Query: 371 CPVIQVPGFTYPVKSFYLEDVLSILKSAESNH--LDSASLIVPNEDPELTEENKSTLDEA 428
CPVI VPGF +PV ++LED+L ++ ++H + + P + + + EA
Sbjct: 367 CPVISVPGFIHPVTEYHLEDILPMVGWGGTHHTAVGAKKSDGPIVNAPTSGSGVDVMREA 426
Query: 429 ISLAW---SNDEFDMLLELVSLEGSPNVYNYQHTL--TGLTPLMVLAGKGRVGDVCMLLS 483
I A+ +++ FD L++ + E P +Y + TG T LM AGKGR +V LL
Sbjct: 427 IMRAFLEDTDESFDWLMQ-CARESDPQGLSYVNVCHSTGATALMAAAGKGRQMEVSQLLG 485
Query: 484 LGADCQLKAKDGRTALQLGEQENQPEVAQIIKK---HMENALSDSMKQQLLDKYLATVNP 540
LGA +++ DG A E+ E+A+ ++ ++A S LL Y +++P
Sbjct: 486 LGASPAMRSSDGSNAADWAERFGHIELAEALRSVDDEDDHAGSHEQSALLLSNYQLSIDP 545
Query: 541 ELIDLVLIEQLL----RKICMDSE-DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVI 595
+ +D+ LI L+ R+ +D + +GAILVFLPGW++I+K RD L A+ + I
Sbjct: 546 DEVDIDLIHNLIVWIVRERTVDEKSEGAILVFLPGWDEISKLRDSLSAD--YNVCRAASI 603
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
+PLHSMV +Q+KVF+RP G RKI+LSTNIAETA+TIDDVV+VIDSGR+KEKSYD Y+
Sbjct: 604 LPLHSMVAPAEQRKVFQRPAKGMRKIVLSTNIAETAVTIDDVVFVIDSGRLKEKSYDAYS 663
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
VSTLQ++W+S+ASAKQR GRAGR + G C+ +YS R +S ++Q+PE++R P+EELCL
Sbjct: 664 AVSTLQAAWISQASAKQRRGRAGRVRPGECFRVYSSSRYSSFAEYQLPEMQRSPLEELCL 723
Query: 716 QVKLL---------DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766
QV++L D + FL + ++PPV NA+ +L+DIGAL+ DE++T LG
Sbjct: 724 QVRVLAESGAGVVEDGPGSTAGFLARAIEPPVPQATENAVQLLKDIGALTNDERLTRLGR 783
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
LG L +HP + KM+ +A L LDP LT+ACA+ YR PF IS + ++ A+ +
Sbjct: 784 HLGELPLHPRVGKMILYAALFGVLDPILTVACAAAYRPPFI--ISTDGRRTGDIARAAFS 841
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQ---RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
GG SDQLAV A+E W+ + R E F + +S ++M+ GMR+QL LI
Sbjct: 842 DQAGGGSDQLAVTKAYEAWERVLRDGGRSGERMFLNANSLSPSTLHMIKGMRQQLVQALI 901
Query: 884 KNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHP 943
+ G I D+ S S N++ ++ AVL G+YP+V R P K + T G +VR+H
Sbjct: 902 QRGII-SDLRSASVNSQSGALVRAVLAVGMYPLVGRFLPQCKAPT--LATLRGERVRVHA 958
Query: 944 HSLNFKLSFKKTDD--------CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
HS+N K+ + L +DE+ RG + VR CT+V ++ + ++ V
Sbjct: 959 HSVNGKVDVAEISSRRESGEKIATLCCFDELIRGSHAVQVRECTLVAAAAIVFVCAKLTV 1018
Query: 996 APAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWL 1055
P D +D +T GE + S +VVD WL
Sbjct: 1019 RP-------------------------DVPHVDPET----GEEIPRPGPPSALLVVDDWL 1049
Query: 1056 YFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
F +AQI LR RL A KV HPQ+ LP + S+ ++ +L+
Sbjct: 1050 RFRVPLRAVAQITVLRLRLQNAFAMKVEHPQEMLPKDIHESVRCVSRVLA 1099
>gi|303283312|ref|XP_003060947.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457298|gb|EEH54597.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1111
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/1151 (37%), Positives = 631/1151 (54%), Gaps = 110/1151 (9%)
Query: 26 EATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSV 85
E TRI I Q L F AS + F +L+N +RAVVH KK+G+ SKS G+G +RRV V
Sbjct: 1 EGTRINIDQQLARFKASDEVEIAFPPDLNNHDRAVVHSEAKKLGLKSKSHGKGDERRVHV 60
Query: 86 CKSKKRVETD---KGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDK 142
K K+ D +G+ + T + ++ D+ K K
Sbjct: 61 TKPKEFKPEDHEVRGR----ARTRTRELEIAASGSLDAAWDDEDRGAAGASGGHGGKRAK 116
Query: 143 TRGKRVDIFCKPKMSKAEIAMKVE-------SLTSRIEKDANLRQIVEERSKLPISSFKD 195
T P + + A+ E +L +R+ D +L +I +R+ LP+ +FK
Sbjct: 117 T--------APPLLMRPHGAVTPEMATACAAALATRVATDRDLAEIQRKRAALPVDAFKA 168
Query: 196 VITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERI 255
I S S+QVVLI+G TGCGKTTQVPQ+L++ W +G I+CTQPRRISA +VAER+
Sbjct: 169 EILSACASHQVVLIAGATGCGKTTQVPQYLIDDAWQRGVGAAIMCTQPRRISAITVAERV 228
Query: 256 SVERGENIGD-NIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
+ ERGE IG ++GY+IRLE+K ++++FCTNGVLLR L S G ++
Sbjct: 229 AAERGEQIGKGSVGYQIRLENKACADTALLFCTNGVLLRRLTSPGADKM----------- 277
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
+++L+HI++DE+HERD ++DF+ ++R + +PHLRL+LMSAT+ FS+YFGGCPVI
Sbjct: 278 LASLSHIVIDELHERDLFADFLTIVLRSAMARHPHLRLVLMSATVRESLFSEYFGGCPVI 337
Query: 375 QVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWS 434
+VPG+T+PV ++LED+L + ++ + D + ++ + A L S
Sbjct: 338 RVPGYTHPVADYHLEDILDRVGYGGASGGGLTRTATADPDSPEGKAMQAAVMHAF-LEGS 396
Query: 435 NDEFDMLLELV-------SLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGAD 487
+D FD L+ + G + H TG T LM AGKGR +V LL GAD
Sbjct: 397 DDAFDALMCTIRGVGGGGVTVGETALVGVAHEQTGATALMAAAGKGRHVEVGQLLGCGAD 456
Query: 488 CQLKAKDGRTALQLGEQENQPEVAQII---KKHMENALSDSMKQQLLDKYLATVNPELID 544
+++DG ++ + ++A + + +E L +Y +P+ +D
Sbjct: 457 PTQRSRDGSSSADWARRFGHDDIAATLDQAQAELERLAHFQDSAIALSRYQLDADPDEVD 516
Query: 545 LVLIEQLL----RKICMD--------SEDGAILVFLPGWEDINKTRDRLLANP-FFRDTS 591
L L ++L+ R+ D DGAILVFLPGW +I++ RD L A+ F RD
Sbjct: 517 LQLAQELIHWIVRRRAADVAAEQGGGGPDGAILVFLPGWFEISQLRDNLAADSRFGRDV- 575
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+++PLHSMVP +QKKVF+RPP G +K++L+TNIAETA+TIDDVV+VIDSGR+KEKSY
Sbjct: 576 --LVLPLHSMVPPAEQKKVFQRPPRGVKKVVLATNIAETAVTIDDVVFVIDSGRLKEKSY 633
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
D + VSTLQS+W+S+ASA+QR GRAGR + G CY LYS R A+ DFQ+PE++R P+E
Sbjct: 634 DAHTGVSTLQSAWISRASAQQRRGRAGRVRPGECYRLYSSARLAAFADFQLPEMQRSPLE 693
Query: 712 ELCLQVKLLDPNCNI------------------EDFLQKTLDPPVSVTIRNAIIVLQDIG 753
ELCLQV++L ++ +FL + ++PP+ I +A+ +LQDIG
Sbjct: 694 ELCLQVRMLAEASSLGGELGGGAAAVGAGAGSTANFLLQAVEPPIPQAIAHAVTLLQDIG 753
Query: 754 ALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPN 813
AL DE +T LG LG + VHP + KML +A L+ LDP LT+ACA+ YR PF + + N
Sbjct: 754 ALKEDEGLTRLGRHLGEMPVHPRVGKMLLYATLLGVLDPVLTVACAAAYRSPFVMAMDGN 813
Query: 814 EKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNM 870
++ A+ ++ GG SD LAV AF W+ ++ G E F + +S +NM
Sbjct: 814 -REAGKLARQGFSNEAGGASDHLAVSRAFAGWETSRANGGSSGERAFNQRNSLSGATLNM 872
Query: 871 LLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
L GMR QL T L G I D+ S NA ++ AVL G+YP+V RL P
Sbjct: 873 LRGMRSQLLTALSGRGLI-HDLRGASANAGAGSLVRAVLAVGMYPLVGRLLVPGVGANNA 931
Query: 931 -------VETAGGAKVRLHPHSLNFKL-----SFKKTDDCPLMV-YDEITRGDGGMHVRN 977
+ T G KV++HPHS+N KL S D P +V +D++TRG+ ++VR
Sbjct: 932 GGGRTPTLATLRGEKVKIHPHSVNAKLHDAARSSGVADKGPTLVCFDDVTRGEAQLYVRE 991
Query: 978 CTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGE 1037
CT V L+L+A+ + V P D ED + +
Sbjct: 992 CTAVSAASLVLVASSLTVEALPPARLPPHD-------------PEDAAAAAEAMMERDLA 1038
Query: 1038 NVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASM 1097
+V D WL F ++Q+ CLR RL+ A KV P AL P L ++
Sbjct: 1039 QAAQDAANEAVLVCDDWLKFRVPLPVLSQLACLRIRLARAFAAKVQRPADALAPDLAEAL 1098
Query: 1098 YAMASILSYDG 1108
A A++L++DG
Sbjct: 1099 RATATLLAHDG 1109
>gi|145343362|ref|XP_001416316.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576541|gb|ABO94609.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 998
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/981 (40%), Positives = 577/981 (58%), Gaps = 88/981 (8%)
Query: 164 KVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQ 223
+ L ++I DA+L I +R +LP+ FKD I + V +NQVVL++G TGCGKTTQVPQ
Sbjct: 14 RAARLRAKIASDASLAAIQTKREQLPVREFKDAILNAVRANQVVLVAGSTGCGKTTQVPQ 73
Query: 224 FLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDN-IGYKIRLESKGGKHSS 282
++L+ W+ G IVCTQPRRISA +V+ERI+ ERGE+IG + +GY+IRLES+ S
Sbjct: 74 YVLDDAWANGRGASIVCTQPRRISAMTVSERIANERGESIGQSTVGYQIRLESRVSADCS 133
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
++FCT+GVLLR L S+ +L E+ LTHII+DE+HERD ++DF+ I++
Sbjct: 134 LLFCTSGVLLRRLTSEASDKLCES-----------LTHIIIDELHERDLFADFLTIILKG 182
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
++P +PHL+L+LMSAT+ D FS+YFGGCPVI VPG+T+PV ++LED+L ++ +H
Sbjct: 183 VIPKHPHLKLVLMSATMREDLFSEYFGGCPVISVPGYTHPVNEYHLEDILPMIGWGGVHH 242
Query: 403 LDSASLIVPNEDPEL----TEENKSTLDEAISLAW---SNDEFDMLLELV----SLEGSP 451
+ +P + + + + EAI A+ +++ FD L++ S G
Sbjct: 243 TSKKASGGGGGEPRVRAPTSGASVDVMREAIMRAFLEDTDESFDWLMQCARETDSASGLS 302
Query: 452 NVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVA 511
+V N H+ TG T LM AGKGR +V LL LGA +++ DG A ++ E+A
Sbjct: 303 HV-NVAHS-TGATALMAAAGKGRQMEVSQLLGLGASPAMRSTDGSNAADWADKFGHVELA 360
Query: 512 QIIKK---HMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMD-----SEDGA 563
++ E+A S LL Y +V+P+ +D+ LI L+ I + +GA
Sbjct: 361 DALRSVDDENEDAGSHEQSALLLSDYQLSVDPDEVDVDLIHNLIVWIMKERAIDEGSEGA 420
Query: 564 ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIIL 623
ILVFLPGW++I+K RD L A+ + ++PLHSMV Q+KVF+RPP G RKI+L
Sbjct: 421 ILVFLPGWDEISKLRDSLTAD--YNVCHSASVLPLHSMVAPADQRKVFQRPPKGLRKIVL 478
Query: 624 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAG 683
STNIAETA+TIDDVV+VIDSGR+KEKSYD Y+ VSTLQ++W+S+ASAKQR GRAGR + G
Sbjct: 479 STNIAETAVTIDDVVFVIDSGRLKEKSYDAYSAVSTLQAAWISQASAKQRRGRAGRVRPG 538
Query: 684 ICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL---------DPNCNIEDFLQKTL 734
CY +YS R S +Q+PE++R P+EELCLQV++L D + FL + +
Sbjct: 539 ECYRVYSTSRYDSFAQYQLPEMQRSPLEELCLQVRVLAESGAGVVDDGPGSTAGFLARAV 598
Query: 735 DPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL 794
+PPV+ NA+ +L+DIGAL+ +E++T LG LG L +HP + KM+ +A L LDP L
Sbjct: 599 EPPVAQATDNAVQLLKDIGALTEEERLTRLGRHLGELPLHPRVGKMILYAALFGVLDPIL 658
Query: 795 TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ- 853
T+ACA+ YR PF IS + +K A++ ++ GG SD LAV A+ W+ ++ G+
Sbjct: 659 TVACAAAYRPPFI--ISADGRKSGDASRAAFSNEAGGGSDHLAVTKAYMAWEQVQRDGRQ 716
Query: 854 -EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAG 912
E +F + +S ++M+ GMR+QL T LI+ G I D+ S S N+ ++ AVL G
Sbjct: 717 NERYFLNANSLSPSTLHMIKGMRQQLITALIQRGII-SDLRSASANSSSGALVRAVLAVG 775
Query: 913 LYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDD--------CPLMVYD 964
+YP+V R P K + T G +VR+H S+N KL + L +D
Sbjct: 776 MYPLVGRFLPKCKAPT--LATLRGERVRVHAFSVNGKLDVSALGELNESGEKIATLACFD 833
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDC 1024
E+ RG + VR CT+V ++ + + + V P D
Sbjct: 834 ELIRGPHAVQVRECTLVAAAAIVFVCSTLTVKP-------------------------DV 868
Query: 1025 MEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTH 1084
+ID +T GE S +VVD WL F +AQI LR RL A +V
Sbjct: 869 PQIDPET----GEARARDGPPSALLVVDNWLRFRVPLRAVAQITVLRLRLHKAFAMRVER 924
Query: 1085 PQKALPPVLEASMYAMASILS 1105
P+ ALP + ++ A+A +LS
Sbjct: 925 PKDALPADMRGAVDAIARVLS 945
>gi|412990022|emb|CCO20664.1| predicted protein [Bathycoccus prasinos]
Length = 1219
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/1179 (36%), Positives = 637/1179 (54%), Gaps = 151/1179 (12%)
Query: 24 VAEATRIRISQILDGFLASKD-EVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRR 82
V E TRI I + L F A+ D + F A+LSN +RA+VH CKK+G+ SKS G+G++RR
Sbjct: 24 VLEGTRIAIDKQLAEFRANVDCDEIVFPADLSNHDRAIVHTECKKLGLKSKSHGKGEERR 83
Query: 83 VSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGE----PGEKLDANQSR 138
V V K K + D +L SE L + F+ +PP E LD
Sbjct: 84 VHVTKPDKFIAVDADDS--RTLNLSEKGARQLNEYFSKFPPSSNELEMASRGTLDVAWED 141
Query: 139 KSDKTRGKR--------------VDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE 184
++ K+R + D F + + E L + L QI +
Sbjct: 142 ENTKSRAENNNNNATTTTARKPYTDAFLTTFGNNVDYKRLHEELEHKRTHVHELAQISMK 201
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ +KD I V++NQVVL++G TGCGKTTQVPQFLL+ W+ G+ KI+CTQPR
Sbjct: 202 RQTLPVFKYKDEIIERVNANQVVLLAGSTGCGKTTQVPQFLLDDCWANGKPAKIICTQPR 261
Query: 245 RISATSVAERISVERGENIGD-NIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRL 303
RISA +V++RI+ ERGENIG+ +GY+IRLESK K S++ T GVLLR L S+G
Sbjct: 262 RISAMTVSDRIASERGENIGEGTVGYQIRLESKISKACSLLLVTTGVLLRRLTSEG---- 317
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADR 363
A +S+LTHII+DE+HERDR++DF++ +++D+LP YP+L+LILMSAT+ D
Sbjct: 318 -------ADAYLSSLTHIIIDELHERDRFADFLMIVLKDVLPKYPNLKLILMSATMREDL 370
Query: 364 FSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN----------- 412
FS YF CPVI+VPGF +PV+ ++LEDVL+ +N A L P
Sbjct: 371 FSNYFDDCPVIKVPGFIHPVREYHLEDVLAFTNWGGNN----AGLANPQPSKHRKVDASS 426
Query: 413 ----------------EDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNY 456
E +E ++ ++ A +A S++ FD LL+ + ++ N
Sbjct: 427 SFSSQQQQQQQQQQEPSTSEASEMMRAAIENAF-VAPSDETFDWLLQCAAQSKDEDLVNV 485
Query: 457 QHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKK 516
QH+ TG T LM AG+ R +V LL LGA+ LK+++G A E+ ++A +++
Sbjct: 486 QHSATGATALMAAAGRNRTMEVSQLLQLGANVNLKSQNGMLASDWAERFEHEDLASQLRE 545
Query: 517 -----------HMEN------------ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLR 553
ME + D L KY +P+ +D+ L+ L++
Sbjct: 546 LESTPGNNDVAMMEEDGAARDGSFDGPVVLDEAALMRLSKYQLESDPDEVDVDLVCSLVK 605
Query: 554 KICMDSE---DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
+ + DGAILVFLPGW++I+K +D L D I+PLHSMV Q+KV
Sbjct: 606 HVHEKNRAKPDGAILVFLPGWDEISKIKDALSDQAGLTDVQ---IMPLHSMVSPQDQRKV 662
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
F++PP G RK++LSTNIAETA+TIDDVVYVIDSG++KEK YD Y VSTL +W+SKASA
Sbjct: 663 FQKPPRGVRKVVLSTNIAETAVTIDDVVYVIDSGKLKEKGYDAYTAVSTLHQTWISKASA 722
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD--------- 721
QR GRAGR + G Y L+S+ R + +FQ+PE++R P+EE+CLQVK++
Sbjct: 723 TQRKGRAGRVRPGEVYRLFSKSRFEAFAEFQLPEMQRSPLEEICLQVKMMQETLRGMIHS 782
Query: 722 ---PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL---DEKVTELGEKLGCLSVHP 775
P+ FL++ ++ P+ + +A+ +L DIGA + DE++T LG L L +HP
Sbjct: 783 NGAPSPTCASFLKRAVEAPLPQAVDSAVTLLIDIGAFTSAEEDERITRLGRHLADLPLHP 842
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
+ KML +A L+ LDP LT+ACA YR PF + + + ++ A AK + GG SD
Sbjct: 843 RVGKMLLYASLLGVLDPILTIACAGAYRPPFIIG-TDSGRQNANRAKKGFSDALGGGSDH 901
Query: 836 LAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS 893
LA++ AF+ W+ A + G++A F +S ++M+ GMR QL T L + GFI +++
Sbjct: 902 LAIVQAFKEWEVACRNGRQAENQFLWNNSLSGSTLHMIKGMRMQLITALTQRGFI-QNLQ 960
Query: 894 SCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFK 953
S S+N ++ +VL G+YP+V R+ P + + T G +VR+HP S+N + F
Sbjct: 961 SASYNTNATSLVRSVLAVGMYPLVGRMLPQCRAPT--LGTLKGERVRIHPGSVNARFEFS 1018
Query: 954 K-------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
+ + L ++EITR + M+VR+ T++ L+L+A + V P
Sbjct: 1019 QDELENTSSSTTTLACFEEITRNESNMYVRDSTLISGTSLVLIANTVKVEADPP------ 1072
Query: 1007 DDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQ 1066
+D T GE+ S + VD W+ F IAQ
Sbjct: 1073 -------------------VVDPLT----GESFPKPGVPSALLNVDDWISFRVPLTQIAQ 1109
Query: 1067 IYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
+ LR RL A +V +K L L+ ++ + +L+
Sbjct: 1110 LCTLRLRLFKAFASRVERTKKPLAANLQQCLHTTSIVLA 1148
>gi|410903275|ref|XP_003965119.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Takifugu
rubripes]
Length = 1382
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/1259 (34%), Positives = 651/1259 (51%), Gaps = 178/1259 (14%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F S +V F ++LS+ ERA +H + +G +SKS G+G R +
Sbjct: 31 IDEEVKIALNLSLERFYYSDQKVMEFPSSLSSNERAFLHRAAQSLGYSSKSKGKGPNRFL 90
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K DK + + L S + V+ +L +P + E ++D S +S +
Sbjct: 91 TVTKKDG---PDKPQHSM-LLNPSHNTLFVIHNLLERFPISNKE---RVDMQLSTRSAAS 143
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANL----RQIVEE---RSKLPISSFKDV 196
+S+AE A+ + R+ K + R E R LP+ K
Sbjct: 144 L-----------VSEAENALDKNKASGRLNKGIPVVPPQRGSSEHDAFRCSLPVQEHKQE 192
Query: 197 ITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERIS 256
I + N+VVL+ G TG GKTTQ+PQFLL+ E C+I CTQPRR++ +VA+R++
Sbjct: 193 IIKLIRENRVVLVVGATGSGKTTQIPQFLLDECHKNHEPCRIFCTQPRRLATITVADRVA 252
Query: 257 VERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVS 316
ERGEN+G +GY IRLES+ + + FCT+GV LR L++ S ++
Sbjct: 253 AERGENVGKTVGYHIRLESRVSPKTVLTFCTSGVFLRTLMAGDAS-------------LT 299
Query: 317 ALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQV 376
+TH+IVDE+HERD +DF+L +RD+LP +P L+LIL SA LD + F QYFG CPVI +
Sbjct: 300 TVTHVIVDEVHERDGLTDFLLTKLRDVLPKFPSLKLILCSAALDTELFRQYFGSCPVINL 359
Query: 377 PGFTYPVKSFYLEDVLSI--LKSAESNHLDSASLIVPNEDPELTE--------------- 419
G + VK F+LED+L + K E + ++ + N+ LTE
Sbjct: 360 KGRLFDVKEFFLEDILKLTGFKKKEIMNHNAEAHETKNKQKSLTEWCETLKNTSVEEEEG 419
Query: 420 --------ENKSTLD--------------------------EAISLAWSNDEFDMLLELV 445
E+ S LD IS + N++ D ++L
Sbjct: 420 TSVLSRVPEDSSVLDGEDGALNSLPENNPEQLEPWLVREMDSCISNIFLNEDQDAFIQLF 479
Query: 446 SLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQ 504
+L N+ NY+H+ TG T LMV AG+G + + LL +GAD +KA +G TA +
Sbjct: 480 NLILYENMNVNYRHSETGTTALMVTAGQGFLTQMEQLLHMGADVNIKASNGWTAADFAKH 539
Query: 505 ENQPEVAQIIKKHME-------------NALSDSMKQQLLDKYLATVNPELIDLVLIEQL 551
+Q E +++K +E S + +++LL Y + + EL+DL LI L
Sbjct: 540 FHQSESLELLKSFLEVCSPDGSPVEQQVTVESSNKEEELLKLYHQSFDDELVDLDLIMDL 599
Query: 552 LRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTS-KFVIIPLHSMVPSVQQKK 609
L IC S DGAIL+FLPG+++I RDR+L N F D S ++ + LHS + ++ QKK
Sbjct: 600 LHYICSTSSDGAILIFLPGYDEIVAMRDRILYNDSRFSDVSCRYQLFILHSEMQTLDQKK 659
Query: 610 VFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKAS 669
K PP G RKIILSTNIAET+ITI DVV+VIDSG++KEKSYD + VS L++ W+SKAS
Sbjct: 660 ALKTPPSGVRKIILSTNIAETSITISDVVFVIDSGKVKEKSYDTLSRVSMLKTIWISKAS 719
Query: 670 AKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIED 728
QR GRAGRC+ G C+HL+S+LR ++ +FQVP++ R+P++ELCLQ KLL P +C + +
Sbjct: 720 VLQRKGRAGRCKPGYCFHLFSRLRFDNMLEFQVPQLLRMPLQELCLQTKLLAPASCQVAE 779
Query: 729 FLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMD 788
FL K PP + I+NA+ +L+ I A+ E +T+LG L L V P + KM+ A+++
Sbjct: 780 FLAKAPQPPPAHAIKNALQILKSIDAMEQHEDLTDLGFHLADLPVEPPLGKMVLCAVVLK 839
Query: 789 CLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA 848
CLDP LT+AC YRDPF LP ++KK A + AS SD +A++ AF+ W+ A
Sbjct: 840 CLDPILTIACTLAYRDPFILPAEGSKKKAALHCRKHFAS--SSFSDHMALLRAFQAWQKA 897
Query: 849 KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGI 904
+ G E FC +YF+S MNM+LGMR QL +L GF+ D+ + N+ +
Sbjct: 898 RSDGWERAFCEKYFLSQATMNMILGMRTQLLGQLRAIGFVRAHGGSDIRDVNQNSENWAV 957
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDD------- 957
+ A L+AG+YP +A + + ++ K+ HP S+ + K+
Sbjct: 958 VKAALVAGMYPNLAHV----DQETALLSSSRKKKLHFHPTSVLNQSQLKEVRQPFPPYGN 1013
Query: 958 ---------CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDED- 1007
+VYDE++RG + +R C++V P+ + A A P P ++ E
Sbjct: 1014 PAKTPQKYPTEWLVYDEMSRGHRMVIIRCCSMVTPITAAIFAG-CAKLPFPALQEAAEPR 1072
Query: 1008 ------DDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTA 1061
D SD D+D + +ID K ++ WL F
Sbjct: 1073 SAGTQLDGTSDSDSDTED------QIDFK--------------------INDWLIFQMDR 1106
Query: 1062 LDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGF-SGISLPAESVE 1120
+Y +R + + K+ P K EA ++A+ S+L+ + +G+ P +
Sbjct: 1107 NAARLVYEMRHKWQNLFIKKMRFPSKPWSQQDEAIIHAVVSVLAAEEHAAGLQQPTGIGQ 1166
Query: 1121 SLTSMIQATEIDKCPAARNRGTGQNPSNFLMSLMSPNTRQYFPLRDHKSRIPAHKGSTK 1179
M A E D A ++ T P+ +P+ Y PLRD ++PA G +
Sbjct: 1167 RPRPM--AMEEDHSSAKSSKSTPHLPA------AAPS---YSPLRDSSGKMPAASGQVQ 1214
>gi|383860720|ref|XP_003705837.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Megachile
rotundata]
Length = 1166
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/1176 (35%), Positives = 641/1176 (54%), Gaps = 148/1176 (12%)
Query: 14 QKQQQQQSPTVAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTS 72
++ + ++SP + E TRI ++ L L + D+ F ++ + ERA +H++ ++G+ S
Sbjct: 3 RRNRHKKSPLIGEDTRIAVNLTLKKLLETSDQKELEFPSSYTAEERAYIHKLAHELGLKS 62
Query: 73 KSSGRGKQRRVSVCKSKKRVETDKGKEILPS---LTFSEGSKLVLQDLFTHYPPDDGEPG 129
KS G+G R ++V K + G I+ S + + S+ + +L +P + E
Sbjct: 63 KSRGKGTNRFLTVYKRE-------GSTIVQSDAVIKLQKASRQSIYNLLQTFPLNHKECQ 115
Query: 130 EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAM-KVESLTSRIEKDANLRQIVEERSKL 188
+ L ++ R D+ S + AM ++ + ++ + ++ R L
Sbjct: 116 DLLPP-----IERERPLNADV------STSTKAMGRLNNSVPQVPQLKTNFDVLNYRKAL 164
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISA 248
PI F++ I + +++NQV++I GETG GKTTQVPQF+LEH + + C+I+CTQPRR+SA
Sbjct: 165 PIFGFREDILNALNTNQVIIIGGETGSGKTTQVPQFILEHCQQRHQPCRIICTQPRRLSA 224
Query: 249 TSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
SVAER++ ER E IG GY+IRLES+ + + +CTNGVLLR L++ G S L
Sbjct: 225 VSVAERVAFERDEKIGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMA-GDSAL----- 278
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF 368
S +TH+IVDEIHERDR+ DF+L ++D L + L+LILMSATLD + F +YF
Sbjct: 279 -------STVTHVIVDEIHERDRFCDFLLIALKDALQKHKSLKLILMSATLDVNIFVKYF 331
Query: 369 GGCPVIQVPGFTYPVKSFYLEDVLSIL----------------KSAESNHLDSASLIVPN 412
C VI V G +Y V +++LEDVL I K + L+S + P
Sbjct: 332 SKCAVINVLGRSYDVDTYFLEDVLKITGYMTKEMLSKRKELMNKKDQRKLLESWTQYKPQ 391
Query: 413 ED-------------PELTEENK-------------STLDEAISLAWSNDEFDMLLELVS 446
+ P L ++N+ +D++IS AW D +L+
Sbjct: 392 QSGSHTGNERCLLPAPILAQQNEPLPEKVKLEPWLIEEMDKSISDAWLRGGEDNFAQLLY 451
Query: 447 LEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQE 505
S NV +YQH+ T +TPLMV AG+G + LL+LGA+ L+A + TAL
Sbjct: 452 FILSENVSVDYQHSTTSVTPLMVAAGRGCINTTEQLLNLGANLNLRAGNEWTALDWARNM 511
Query: 506 NQPEVAQIIKKHMEN---ALSD---------SMKQQ---LLDKYLATVNPELIDLVLIEQ 550
NQ E A++I+ +M+ A+ D S+ ++ LLD Y T N E I+ L+ Q
Sbjct: 512 NQTECAELIEAYMKTYDCAVQDDAITHAKDVSLSEEDKLLLDVYHHTFNDENINYDLLLQ 571
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS---KFVIIPLHSMVPSVQQ 607
L+ I + G++L+FLPG++DI R+++ N R+ + ++V+ LHS + + Q
Sbjct: 572 LIMHIHLKMPLGSLLIFLPGYDDIVTMREKI--NNEEREMNQGLRYVLYILHSNMQTCDQ 629
Query: 608 KKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSK 667
KKVFK P G RKIILSTNIAET+ITIDDVVYVIDSG++KEKS+D + V TL+S+W+S+
Sbjct: 630 KKVFKPSPLGTRKIILSTNIAETSITIDDVVYVIDSGKVKEKSFDAISGVCTLKSNWISQ 689
Query: 668 ASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNI 726
A AKQR GRAGRC+ GICY L+S +R S+ +Q PEI R+P++ELCL K L P N I
Sbjct: 690 ACAKQRKGRAGRCRKGICYRLFSSIRYNSMQPYQTPEILRLPLQELCLYTKHLAPGNTPI 749
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
+FL + ++PP ++ RNA+ +L+ I AL E +TELG L L + P + KML +A++
Sbjct: 750 AEFLDRAIEPPSNMVTRNAVQLLKTIDALDPWEDLTELGSHLLDLPIEPRLGKMLLYAVV 809
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
+ CLDP LT+ C+ Y+DPF LP P++K+ ATAA+ A+ SD +AV+ AF+ W+
Sbjct: 810 LKCLDPVLTIVCSLAYKDPFVLPSQPSQKRAATAARKRFAT--NTYSDHMAVLRAFQGWQ 867
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVP 902
NA+ G+E FC Q F+S+ VM M++GMR QL +L +GF+ P D+ + N+
Sbjct: 868 NARASGKERAFCEQNFISAAVMEMVVGMRTQLLGQLRASGFVRARGPGDIRDLNSNSENW 927
Query: 903 GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL--NFKLSFKKTDD--- 957
++ A L AGLYP + R+ H R T KV HP S ++ S + T
Sbjct: 928 AVVKAALTAGLYPNLIRVDRDHMQLR----TQKEVKVFFHPSSTLRDYPKSPRMTSAQTH 983
Query: 958 --------CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDD 1009
C ++Y+E++R HVR T+V PL + L ++ E + +
Sbjct: 984 AANVETLPCDWLLYEEMSRTGRFCHVRMATLVNPLTVALFCGPARLSVDVIYEAESVPES 1043
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
SD +ADEN ++ +D W+ F
Sbjct: 1044 ESDSEADEN-------------------------NEGTIFKLDDWVVFKLDPETARFFLH 1078
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
LR++ + L ++ P KA+ + E + + S+++
Sbjct: 1079 LRQKWNALFLRRMKTPNKAMSQLDEKVVSTLVSVIT 1114
>gi|348504281|ref|XP_003439690.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Oreochromis niloticus]
Length = 1393
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/1172 (34%), Positives = 619/1172 (52%), Gaps = 160/1172 (13%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F S + F ++L++ ERA +H + + +G S S G+G R +
Sbjct: 28 IDEEVKIAVTLALERFQYSDQKEMEFPSSLTSTERAFIHRMAQSLGYISNSKGKGPNRFL 87
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
++ +K+ ETD + +P +T S+ + ++ L +P E ++D + KS
Sbjct: 88 TI---RKKNETDNPQPTIP-MTLSQNTLYFIRSLLQRFPISKKE---RIDIQPNEKSG-- 138
Query: 144 RGKRVDIFCKPKMS--KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTV 201
+ + +P S K + ++ + + + + ++ R LP+ ++ I +
Sbjct: 139 ----ISVSAEPDNSYDKNRASGRLNNGIPMVPRRRSPSELDSFRCSLPVYEHQEEIIQII 194
Query: 202 DSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGE 261
N+VVL+ GETG GKTTQ+PQFLL+ KGE+C+I CTQPRR++A +VA+R++ ERGE
Sbjct: 195 KKNRVVLVLGETGSGKTTQIPQFLLDDCSKKGESCRIFCTQPRRLAAIAVADRVAAERGE 254
Query: 262 NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHI 321
+G +GY IRLES+ + + FCT+GVLLR L+S S ++ +TH+
Sbjct: 255 GVGQTVGYHIRLESRVSPKTLLTFCTSGVLLRTLMSGDAS-------------LTTVTHV 301
Query: 322 IVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTY 381
IVDE+HERD +DF+L +RD+L P L+LIL SA LD D F QYFG CPVI + G +
Sbjct: 302 IVDEVHERDGLTDFLLTKMRDVLQKIPTLKLILSSAALDIDLFRQYFGSCPVIHLKGRHF 361
Query: 382 PVKSFYLEDVLSI--LKSAESNHLDSASLIVPNEDPELTE-----------ENKST---- 424
VK F+L D+L + S + + + LTE E +ST
Sbjct: 362 EVKEFFLGDILRLTGFTSKDMRKYKEETETKERKQKYLTEWCQAVQTSSVGEKQSTHAKG 421
Query: 425 -----------------------------LDEAISLAWSNDEFDMLLELVSLEGSPNV-Y 454
+D IS + N++ D ++L +L S +V
Sbjct: 422 FLPDSGCGTRGFKQNENDTEQMEPWLRREMDSCISSIFLNEDQDSFIQLFNLILSESVNV 481
Query: 455 NYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQII 514
+Y H+ TG T LM AG+G + + LLSLGAD +KA +G TAL E Q + ++
Sbjct: 482 DYMHSETGTTALMAAAGRGFITQLEQLLSLGADINIKASNGWTALDFAEHFQQTDAVDLL 541
Query: 515 KKHM------------------ENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKIC 556
K + E +L D Q+LL Y + + + +DL LI LL IC
Sbjct: 542 KSSIPLGEVSNLDESALVQCGPEMSLED---QELLRLYHHSFDDQWVDLELIMNLLHNIC 598
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
+ DGA+L+FLPG+++I + RDR+L + F + ++ + LHS + + QKK K
Sbjct: 599 SSTSDGAVLIFLPGYDEIVELRDRILHDDKRFSGQSERYHVFTLHSDMQTQDQKKALKTS 658
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
PPG RKIILSTNIAET+ITI+DVV+VIDSG++KEKS+D +NVS L++ W+SKASA QR
Sbjct: 659 PPGVRKIILSTNIAETSITINDVVFVIDSGKVKEKSFDTLSNVSMLKTVWISKASALQRK 718
Query: 675 GRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKT 733
GRAGRC+ GIC+HL+S+LR ++ +FQVP++ R+P++ELCLQ KLL P +C + +FL K
Sbjct: 719 GRAGRCRPGICFHLFSRLRFNNMLEFQVPQLLRMPLQELCLQTKLLAPSSCPVAEFLAKA 778
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
PP + +RNA+ +L+ I A++ E +T+LG L L V P + KM+ A+++ CLDP
Sbjct: 779 PQPPSTHAVRNAVQMLKKIDAMNQYEDLTDLGYHLADLPVEPHLGKMVLCAVVLKCLDPI 838
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LT+AC YRDPF LP ++K+ A + + S SD +A++ AF+ W+ A+ G
Sbjct: 839 LTIACTLAYRDPFILPTQSSQKRAALSCRKRFTS--NTFSDHMALLRAFQAWQKARSEGW 896
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVL 909
E FC + F+S M+M+LGMR QL +L GF+ D+ + N+ ++ A L
Sbjct: 897 ERGFCEKNFLSQATMDMILGMRTQLLGQLRAIGFVRARGGCDIRDVNLNSENWAMVKAAL 956
Query: 910 MAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDD-----------C 958
+AG+YP N F + + K+ HP S+ + FK+ D
Sbjct: 957 VAGMYP----------NMVNFNKESTLKKLHFHPTSVLSQFQFKEVGDKNQTRMAQALPT 1006
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLL------LATEIAVAPAPDNEDDDEDDDMSD 1012
M+YDE++RG + VR CT+V + + + L + PA + + DD+SD
Sbjct: 1007 DWMIYDEMSRGHRMVTVRCCTLVTSITVAIFGGCARLHSSALHEPAVQKTNGNPLDDISD 1066
Query: 1013 DDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRE 1072
+ ED EI +D WL F + LR+
Sbjct: 1067 SET------EDLSEIR----------------------IDDWLVFEMDREAAGLLSELRQ 1098
Query: 1073 RLSVAILFKVTHPQKALPPVLEASMYAMASIL 1104
+ + ++ P K EA + + S+L
Sbjct: 1099 KWQSLFIKRIRCPSKPWSQQDEAVIQTLVSVL 1130
>gi|307184869|gb|EFN71147.1| YTH domain-containing protein 2 [Camponotus floridanus]
Length = 1154
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/1192 (35%), Positives = 649/1192 (54%), Gaps = 158/1192 (13%)
Query: 15 KQQQQQSPTVAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTSK 73
+++QQ+ + E TRI ++ + L ++D+ F ++ + ERA +HE+ +++G+ SK
Sbjct: 3 RRKQQRHRPIGEDTRIAVNLTIKKLLETQDQKELEFPSSYTAEERAYIHELARELGLKSK 62
Query: 74 SSGRGKQRRVSVCKSKKRVETDKGKEILPS---LTFSEGSKLVLQDLFTHYPPDDGEPGE 130
S G+G R ++V K + G I+ + + + SK + +L +P + E +
Sbjct: 63 SRGKGMNRFLTVYKRE-------GSTIVQADAVIKLRKPSKQSIYNLMQSFPLNHKECQD 115
Query: 131 KLDANQSRKSDKTRGKRVDIFCKPK-MSKAEIAM-KVESLTSRIEKDANLRQIVEERSKL 188
L ++ R D+ K M + ++ +V L + + ++ R L
Sbjct: 116 LLPP-----IERERPLNNDVNTNTKTMGRLNNSIPQVPQLKTNFD-------VLHFRKSL 163
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISA 248
PI S ++ I + ++++QVV+I+GETGCGKTTQVPQ++LEH K + C+I+CTQPRR+SA
Sbjct: 164 PIFSAREEIINALNNHQVVIIAGETGCGKTTQVPQYILEHYQQKHQACRIICTQPRRLSA 223
Query: 249 TSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
SVAER++ ER E IG GY+IRLES+ + + +CTNGVLLR L+ G S L
Sbjct: 224 VSVAERVAFERDEKIGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMG-GDSAL----- 277
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF 368
+ LTHIIVDE+HERDR+ DF+L ++D L Y L+LILMSAT+D F++YF
Sbjct: 278 -------TTLTHIIVDEVHERDRFCDFLLIALKDALVKYRSLKLILMSATMDISIFAKYF 330
Query: 369 GGCPVIQVPGFTYPVKSFYLEDVLSI------------------------LKS------- 397
C VI VPG +Y V ++LED+L + L+S
Sbjct: 331 NKCTVINVPGRSYDVDVYFLEDILKMTGYMTKEMLIKKKEFLKCKDKQKTLESWKQYKPQ 390
Query: 398 -------AESNHLDSASLIVPNE--------DPELTEENKSTLDEAISLAWSNDEFDMLL 442
+E N L + L N+ +P L EE +D++I AW N D
Sbjct: 391 HSNRNTRSEKNVLPAPILAQQNDPIPEKVKLEPWLIEE----MDKSIFDAWVNGREDNFA 446
Query: 443 ELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQL 501
+L+ S NV +YQH+ T +TPLM A +G + LL+LGA+ L+A + TAL
Sbjct: 447 QLLHFILSENVSVDYQHSETSITPLMAAAVRGCINTTEQLLNLGANLHLRAVNDYTALDW 506
Query: 502 GEQENQPEVAQIIKKHME--------NAL-----SDSMKQQ---LLDKYLATVNPELIDL 545
+ N E A++I+ +M+ N L + S+ ++ LLD Y T N + ID
Sbjct: 507 AKSRNHTECAELIEAYMKTYDCVVPNNELAHVTDTTSLSEEDKLLLDVYHHTFNDDNIDY 566
Query: 546 VLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPS 604
L+ +L+ I + G+IL+FLPG++DI R+R+ A ++ + LHS + +
Sbjct: 567 NLLLELIFYIHVKMPPGSILIFLPGYDDIVTMRERINAEEKRMNQNLRYNLYVLHSNMQT 626
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
QKKVFK P G RKIILSTNI+ET+ITIDDVVYVIDSG++KEKS+D + V TL S+W
Sbjct: 627 CDQKKVFKPSPQGTRKIILSTNISETSITIDDVVYVIDSGKVKEKSFDAISGVCTLTSNW 686
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-N 723
+S+A AKQR GRAGRC+ GICY L+S +R ++ +Q PEI R+P++ELCL K L P N
Sbjct: 687 ISQACAKQRKGRAGRCRRGICYRLFSSVRYNNMQLYQTPEILRLPLQELCLFTKHLTPGN 746
Query: 724 CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
I +FL K L+PP +V RNA+ +L+ I AL E +TELG L L + P + KML +
Sbjct: 747 TPIAEFLDKALEPPSNVVTRNAVQLLKTIDALDPWEDLTELGSHLLDLPIEPRLGKMLLY 806
Query: 784 AILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFE 843
A+++ CLDP LT+ C+ Y+DPF LP P++K+ TAA+ + A+ G SD + V+ AF+
Sbjct: 807 AVVLKCLDPILTIVCSLAYKDPFILPSQPSQKRALTAARKKFAT--GTYSDHMVVLRAFQ 864
Query: 844 CWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNA 899
W+NA+ G+E FC + F+S+ VM M++GMR QL +L +GF+ P D+ + N+
Sbjct: 865 GWQNARAAGKERAFCEKNFISAPVMEMVVGMRTQLLGQLRASGFVRARSPGDIRDLNSNS 924
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL--NFKLSFKKTDD 957
++ A L AGLYP + R H R T KV HP S ++ S + T
Sbjct: 925 ENWAVVKAALTAGLYPNLIRADREHMQLR----TQKEVKVFFHPSSTLRDYPKSPRMTSA 980
Query: 958 -----------CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
C ++Y+E++R HV+ T+V PL + L + A P N
Sbjct: 981 QTHAANVQTLPCDWLIYEEMSRTGRFCHVKVVTLVNPLTVALFS---GPARLPMN----- 1032
Query: 1007 DDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQ 1066
+ E+ESD E+D+ G +D W+ F + AQ
Sbjct: 1033 -IICETEAVPESESDS---EVDESHEG-------------TIFKLDDWVVFKLDP-ETAQ 1074
Query: 1067 IYC-LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
++ LR++ + L ++ P KA+ + E + + ++++ + + G+ PA
Sbjct: 1075 LFLYLRQKWNALFLRRMKAPSKAMSALDEKVINTLVTVITNEEQACGLQQPA 1126
>gi|118104219|ref|XP_413970.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Gallus gallus]
Length = 1439
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/1305 (33%), Positives = 664/1305 (50%), Gaps = 182/1305 (13%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
V+E I ++ L+ F S D+ +F ++ ++ ERA +H +C+ +G+ SKS G+G R +
Sbjct: 52 VSEELEIALNLALERFWYSDDQEMSFPSSFTSTERAFIHRLCQSLGLISKSKGKGSSRYL 111
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V KK E+ LT +K + L +P + E E L Q
Sbjct: 112 TV--RKKNGSEVAHAEMTCCLT--PRTKQTVHSLIHRFPLTNKERIELLPKTQ------- 160
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE---RSKLPISSFKDVITST 200
RG + + K E+ L+S I + R E R LP+ K+ I
Sbjct: 161 RGNAFAVETENK----EVGKTSGRLSSGIPQVPLKRGESEYDSFRQSLPVFEKKEEIVKI 216
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERG 260
+ N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++ +VAER++ ER
Sbjct: 217 IKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCRIFCTQPRRLAVIAVAERVAAERR 276
Query: 261 ENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTH 320
E +G +GY+IRLES+ + + FCTNG+LLR L++ +S +TH
Sbjct: 277 EKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMA-------------GDSALSTVTH 323
Query: 321 IIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFT 380
+IVDE+HERDR+SDF+L +RD+L + +L+LI+ SA LDA+ F +YFG CPVI + G
Sbjct: 324 VIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYFGSCPVIHIQGRP 383
Query: 381 YPVKSFYLEDVL--------SILK------------------------------------ 396
+ VK +LED+L ++K
Sbjct: 384 FEVKEMFLEDILRSTGYTNKEMIKYKKEKQREEKQQSTLTEWCCAQENSSNPESRRRRSV 443
Query: 397 ---SAESNHLDSASLIVPNE---------DPELTEENKSTLDEAISLAWSNDEFDMLLEL 444
S E N LDS+ V N +P L +E +D +S W + + D ++
Sbjct: 444 ASVSEEYNLLDSSGDTVFNHLIERDTSCLEPWLIKE----MDSCLSDIWLHKDIDSFAQV 499
Query: 445 VSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGE 503
+ NV +Y+H+ T T LM+ +G+G + V L+S+GA K+ +G AL +
Sbjct: 500 FHFILTENVSVDYRHSETSATALMIASGRGFLSQVEQLISMGASVHCKSSNGWMALDWAK 559
Query: 504 QENQPEVAQIIKKHMENALSDSMKQ----------------QLLDKYLATVNPELIDLVL 547
Q EV +++ + + S ++ + +LL Y + + E +DL L
Sbjct: 560 HFGQTEVVDLLESYSASMESGNLDESSLVQASGNDLGAEDRELLKAYHHSFDDEKVDLDL 619
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSV 605
I LL IC S+ GAIL+FLPG+++I RDR++ + F + ++ + LHS + ++
Sbjct: 620 IMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHRYQVFMLHSNMQTL 679
Query: 606 QQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 665
QK V K PP G RKIILSTNIAET+IT++DVV+VIDSG+MKEKS+D + V+ L++ W+
Sbjct: 680 DQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWI 739
Query: 666 SKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NC 724
SKASA QR GRAGRC+ G+C+HL+S+LR ++ +FQ PE++R+P++ELCL KLL P NC
Sbjct: 740 SKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQTPELRRMPLQELCLHTKLLAPVNC 799
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
+ DFL K DPP ++ +RNAI +L+ I A+ + E +TELG L L V P + KM+ A
Sbjct: 800 PVVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCA 859
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+++ CLDP LT+AC YRDPF LP ++K+ A + LA+ G SD + ++ AF+
Sbjct: 860 VVLKCLDPILTIACTLAYRDPFVLPTVASQKRAAMLCRKRLAA--GTFSDHMVLLRAFQA 917
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNAR 900
W+ A+ G E FC + F+S M +++GMR QL +L GF+ D+ + N+
Sbjct: 918 WQKARSDGWERVFCEKNFLSQATMEIIIGMRTQLLGQLRALGFVRARGGADIRDVNVNSE 977
Query: 901 VPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----- 954
++ A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 978 NWAVVKAALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPTSVLSQAQYKKIPPSN 1032
Query: 955 ----------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDD 1004
TD ++YDE+TR ++R C+VV P+ + L + A P N
Sbjct: 1033 GQAAAVQALPTD---WLIYDEMTRAHRIANIRCCSVVTPVTVALFS---GPARLPRNALQ 1086
Query: 1005 DEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDI 1064
+ + +++N+SD SG E + +D WL+F +
Sbjct: 1087 EPLSFRGNRVSNDNDSD----------SGMEDER-----SNVALLKLDEWLHFKLDSEVA 1131
Query: 1065 AQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSY-DGFSGISLPAESVESLT 1123
+ L+ + +L ++ P K E ++ A+ S+LS + F+G+ P+ V
Sbjct: 1132 GLLMQLKLKWHSLLLRRMRAPSKPWSQADEITIRAIISVLSTEEQFAGLLQPS-GVGQRP 1190
Query: 1124 SMIQATEIDKCPAARNRGT---------GQNPSNFLMSLMSPNTRQYFPLRDHKSRIPAH 1174
+ E+ P R+ + N L P Q P R + + A
Sbjct: 1191 RPVSYNELPSAPTWRSSSSSAETELSDDSSNAEKVLRKSAPPAFHQ--PRRHKEKNVVAS 1248
Query: 1175 KGST--KGNQLSTQVAQ-----PPLFHGSPVVGSGSGTHIPPGPR 1212
K ++ K +Q S + P SPV G GS T P PR
Sbjct: 1249 KRTSDEKSDQSSVKSTDSSCYPSPCVSPSPVSGKGSKT---PSPR 1290
>gi|332221479|ref|XP_003259888.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Nomascus
leucogenys]
Length = 1430
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/1176 (34%), Positives = 623/1176 (52%), Gaps = 149/1176 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS------LI 409
VK +LED+L +LK SA+ N L S L
Sbjct: 375 VKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSLKPESQRQRTVLN 434
Query: 410 VPNED-----------PELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
V +E +LTE++ + L D +S W + + D ++ L +
Sbjct: 435 VTDEYDFLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 494
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 495 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 554
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 555 IVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 614
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+F+PG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 615 NICHTCDAGAVLIFVPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 674
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 675 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 734
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+HL+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC+I DFL
Sbjct: 735 QRKGRAGRCRPGICFHLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCSIADFL 794
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ + A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 795 MKAPEPPPALIVRNAVQMLKTVDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 854
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 855 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARS 912
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 913 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 972
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 AALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAI 1027
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1028 KALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRADG 1084
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++DKT+ + +D WL+F + +
Sbjct: 1085 IPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLHFKLQPEAASLLLQ 1125
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
LR++ L ++ P K V EA++ A+ ++LS
Sbjct: 1126 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLS 1161
>gi|344265985|ref|XP_003405061.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Loxodonta
africana]
Length = 1437
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/1188 (34%), Positives = 626/1188 (52%), Gaps = 150/1188 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 48 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 107
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 108 TV----KKKDGSEAAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 156
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 157 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 214
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 215 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 274
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 275 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 321
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 322 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIHIQGRPFE 381
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 382 VKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRTVPN 441
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 442 VTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 501
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 502 ENVSVDYRHSETSATALMVAAGRGFTSQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 561
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 562 IVDLLESYSASLEFGNLDESSLVQTNGSDLSTEDRELLKAYHHSFDDEKVDLDLIMHLLY 621
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 622 NICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 681
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 682 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 741
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 742 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPINCPIADFL 801
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 802 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 861
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 862 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 919
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 920 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 979
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAGG-AKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V TA KVR HP S+ + +KK
Sbjct: 980 AALVAGMYPNLV-----HVDRENVVLTAQKEKKVRFHPTSVLSQPQYKKIPPANGQAAAI 1034
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1035 QALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRADG 1091
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++D+T+ T+ +D WL F + +
Sbjct: 1092 IPNDSSDS--------EMEDRTTANLA-----------TLKLDEWLSFKLDPEAASLLLQ 1132
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1133 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1180
>gi|300796442|ref|NP_001179740.1| probable ATP-dependent RNA helicase YTHDC2 [Bos taurus]
gi|296483779|tpg|DAA25894.1| TPA: YTH domain containing 2-like [Bos taurus]
gi|440900126|gb|ELR51325.1| Putative ATP-dependent RNA helicase YTHDC2 [Bos grunniens mutus]
Length = 1429
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/1189 (34%), Positives = 628/1189 (52%), Gaps = 152/1189 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 40 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 99
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 100 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 148
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 149 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 206
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 207 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 266
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 267 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 313
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 314 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 373
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S +PN
Sbjct: 374 VKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENSFKPESQRQRAIPN 433
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 434 VTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 493
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 494 ENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 553
Query: 510 VAQIIKKH--------------MENALSD--SMKQQLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + ++ + SD + ++LL Y + + E +DL LI LL
Sbjct: 554 IVDLLESYSASLEFGNLDESSLVQTSGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 613
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC E GAIL+FLPG+++I RDR+L + F + ++ + LHS + + QKKV
Sbjct: 614 NICHSCEAGAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVL 673
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 674 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 733
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 734 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCAIADFL 793
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 794 MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 853
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 854 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 911
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 912 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 971
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAG--GAKVRLHPHSLNFKLSFKK---------- 954
A L+AG+YP + + R V AG KVR HP S+ + +KK
Sbjct: 972 AALVAGMYPHLVHV------DRENVVLAGPKEKKVRFHPTSVLSQPQYKKIPPANGQTAA 1025
Query: 955 -----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDD 1008
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1026 IQALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRAD 1082
Query: 1009 DMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIY 1068
+ +D +D E++D+T+ T+ +D WL F + +
Sbjct: 1083 GIPNDSSDS--------EMEDRTTANLA-----------TLKLDEWLSFKLEPEAASLLL 1123
Query: 1069 CLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1124 QLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1172
>gi|327276569|ref|XP_003223042.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Anolis
carolinensis]
Length = 1440
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/1190 (34%), Positives = 626/1190 (52%), Gaps = 154/1190 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++ ++ ERA +H + + +G+ SKS G+G R +
Sbjct: 45 IDEEVKIAVNIALERFRYGDQREMEFPSSFTSTERAFIHRLSQSLGLISKSKGKGANRYL 104
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V KK+ ++ ++ + +K ++ L +P + E E L +
Sbjct: 105 TV---KKKDGSELAHAVM-TCNLIPNTKHAIRSLVQRFPVTNKERTELLPKTE------- 153
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ +D I +
Sbjct: 154 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVYEKQDEIVRIIK 211
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 212 ENKVVLIVGETGSGKTTQIPQFLLDDSYKNGIPCRIFCTQPRRLAAIAVAERVAAERREK 271
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ G S L S +TH+I
Sbjct: 272 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-GDSAL------------STVTHVI 318
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD L + L+LIL SA LD + F +YFGGCPVI +PG +
Sbjct: 319 VDEVHERDRFSDFLLTKLRDTLQKHSSLKLILSSAALDVNLFVRYFGGCPVIYIPGRPFE 378
Query: 383 VKSFYLEDV---------------------------LSILKSAESN-----HLDSASLIV 410
VK +LED+ L+ SA+ N A L V
Sbjct: 379 VKEMFLEDLLRTTGYTNKEMIKYKKEKQREEKQQTTLTEWYSAQDNSKPELQRQRAVLNV 438
Query: 411 PNE-----------------------DPELTEENKSTLDEAISLAWSNDEFDMLLELVSL 447
E +P L +E +D +S W + + D ++ L
Sbjct: 439 AEEYDLLDDGGDTVFSQLAEKDVNCLEPWLIKE----MDACLSDIWLHKDIDAFAQVFHL 494
Query: 448 EGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQEN 506
+ NV +Y+H+ T T LMV +G+G + V L+ +GA+ +K+ +G TAL+ +
Sbjct: 495 ILTENVSVDYRHSETSATTLMVASGRGFLSQVEQLIGMGANVHIKSSNGWTALEWAKHFG 554
Query: 507 QPEVAQIIKKHMENALSDSMK----------------QQLLDKYLATVNPELIDLVLIEQ 550
Q EV +++ + + S ++ Q+LL Y + + E +DL LI
Sbjct: 555 QTEVVDLLESYCASLESGNLDESSLVHANASELSVEDQELLKAYHHSFDDEKVDLDLIMH 614
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQK 608
LL IC E GA+L+FLPG+++I RDR+L + F + +F + LHS + + QK
Sbjct: 615 LLYNICHSCEAGAVLIFLPGYDEIVGLRDRILFDDKRFADNAHRFQVFMLHSNMQTSDQK 674
Query: 609 KVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
KV K PPG RKIILSTNIAET+IT++DVV+VIDSG+MKEKS+D N V+ L+ W+SKA
Sbjct: 675 KVLKTSPPGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALNCVTMLKMVWISKA 734
Query: 669 SAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIE 727
SA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I
Sbjct: 735 SAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPINCPIA 794
Query: 728 DFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
DFL K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++
Sbjct: 795 DFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVL 854
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
CLDP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+
Sbjct: 855 KCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQK 912
Query: 848 AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPG 903
A+ G E FC + F+S M +++GMR QL +L +GF+ D+ + N+
Sbjct: 913 ARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWA 972
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK-------- 954
++ L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 VVKGALVAGMYPNIV-----HVDRENTVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQV 1027
Query: 955 -------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDED 1007
TD ++YDE+TR ++R C+VV P+ + L A P N + E
Sbjct: 1028 AAIQALPTD---WLIYDEMTRAHRIANIRCCSVVTPVTVALFC---GSARLPSNASEVEL 1081
Query: 1008 DDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQI 1067
+ D A + SD E++D+T+ + +D WL F + +
Sbjct: 1082 SYKNLDGAPNDSSDS---EMEDRTTANLA-----------ALKLDEWLNFKLDPEAASLL 1127
Query: 1068 YCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1128 LQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1177
>gi|307197900|gb|EFN78999.1| Uncharacterized protein KIAA0564-like protein [Harpegnathos saltator]
Length = 2886
Score = 640 bits (1651), Expect = e-180, Method: Compositional matrix adjust.
Identities = 420/1170 (35%), Positives = 628/1170 (53%), Gaps = 156/1170 (13%)
Query: 24 VAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRR 82
+ E TRI ++ L L + D+ F ++ + ERA +HE+ + +G+ SKS G+G R
Sbjct: 12 IGEDTRIAVNLTLKKLLETSDQKELEFPSSYTAEERAYIHELARGLGLKSKSRGKGMNRF 71
Query: 83 VSVCKSKKRVETDKGKEILPS---LTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRK 139
++V K + G I+ + + SK + +L +P + E + L
Sbjct: 72 LTVYKRE-------GSTIVQADAVIKLQNASKQCIYNLSHTFPLNQKEYQDLLPP----- 119
Query: 140 SDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLR---QIVEERSKLPISSFKDV 196
++ R D+ K + L S I + L+ ++ R LPI + ++
Sbjct: 120 IERERPLNTDVNTSTK--------AMGRLNSSIPQVPQLKTNFDVLHFRKSLPIFNAREE 171
Query: 197 ITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERIS 256
I + +++ QVV+I+GETGCGKTTQVPQ++LEH K + C+I+CTQPRR+SA SVAER++
Sbjct: 172 ILTALNNYQVVIIAGETGCGKTTQVPQYILEHCQQKHQACRIICTQPRRLSAVSVAERVA 231
Query: 257 VERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVS 316
ER E IG GY+IRLES+ + + +CTNGVLLR L+ G S L S
Sbjct: 232 FERDEKIGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMG-GDSAL------------S 278
Query: 317 ALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQV 376
LTHIIVDE+HERDR+ DF+L ++D L Y L+LILMSAT+D F++YF C VI V
Sbjct: 279 TLTHIIVDEVHERDRFCDFLLIALKDALVKYRSLKLILMSATMDTSIFAKYFNKCTVINV 338
Query: 377 PGFTYPVKSFYLEDVLSI------------------------------LKSAESNH---- 402
PG +Y V ++LED+L + K SN
Sbjct: 339 PGRSYDVDVYFLEDILKMTGYMTKEMLAMKKEFFKLKDQRKVLESWTQYKPQHSNRNTTK 398
Query: 403 ---LDSASLIVPNEDP-----ELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNV- 453
L A ++ DP +L +D++IS AW N D +L+ S NV
Sbjct: 399 EKCLLPAPILAQQSDPIPERVKLEPWLMEEMDKSISDAWLNGGEDNFAQLLHFILSENVS 458
Query: 454 YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQI 513
+YQH+ T +TPLMV AG+G + LL+LGA+ L+A + TAL ++ NQ E A++
Sbjct: 459 VDYQHSKTSVTPLMVAAGRGCINTTEQLLNLGANLNLRAGNEWTALDWAKKMNQTECAEL 518
Query: 514 IKKHM----------------ENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICM 557
I+ +M E +LS+ K LLD Y T N + ID L+ +++ I +
Sbjct: 519 IEAYMKTYDCTVSNDELMRVAETSLSEESKI-LLDIYHHTFNDDNIDYNLLLEVIFYIHL 577
Query: 558 DSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS-KFVIIPLHSMVPSVQQKKVFKRPPP 616
+ G+IL+FLPG++DI RD++ A + ++ + LHS + + QKKVFK P
Sbjct: 578 KMQPGSILIFLPGYDDIVTMRDKINAEEKRMNQGLRYSLYVLHSNMQTCDQKKVFKSSPH 637
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
G RKIILSTNIAET+ITIDDVVYVIDSG++KEKS+D + V TL S+W+S+A AKQR GR
Sbjct: 638 GTRKIILSTNIAETSITIDDVVYVIDSGKIKEKSFDAISGVCTLTSNWISQACAKQRKGR 697
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLD 735
AGRC+ GICY ++S +R ++ +Q PEI R+P++ELCL K L P N I +FL + L+
Sbjct: 698 AGRCKRGICYRMFSSVRFNNMQLYQTPEILRLPLQELCLYTKYLTPGNTPIAEFLDRALE 757
Query: 736 PPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALT 795
PP ++ RNA+ +L+ I AL E +TE+G L L + P + KML +A+++ CLDP LT
Sbjct: 758 PPSNIVTRNAVQLLKTIDALDPWEDLTEMGSHLLDLPIEPRLGKMLLYAVVLKCLDPILT 817
Query: 796 LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
+ C+ Y+DPF LP P++K+ TAA+ + A+ G SD + V+ AF+ W+NA+ G+E
Sbjct: 818 IVCSLAYKDPFVLPSQPSQKRALTAARKKFAT--GTYSDHMVVLRAFQGWQNARASGKER 875
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMA 911
FC + F+S+ VM M++GMR QL +L +GF+ P D+ + N+ ++ A L A
Sbjct: 876 AFCEKNFISAPVMEMVVGMRTQLLGQLRASGFVRARSPSDIRDLNSNSENWAVVKAALTA 935
Query: 912 GLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL--NFKLSFKKTDD-----------C 958
GLYP + R+ H R T KV HP S +F S + T C
Sbjct: 936 GLYPNLIRVDRDHFQLR----TQKEVKVFFHPSSTLRDFPKSPRMTSAQTHASNVHSLPC 991
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAP---DNEDDDEDDDMSDDDA 1015
++Y+E++R HV+ T+V PL + L + PA D + E SD D+
Sbjct: 992 DWLLYEEMSRTGRFCHVKFVTLVNPLTVALFS-----GPARLPMDVLHEAEAVWESDSDS 1046
Query: 1016 DENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLS 1075
+ +ES E + +D W+ F LR++ +
Sbjct: 1047 EVDESHEGTI-----------------------FKLDDWVVFKLDPETADLFLQLRQKWN 1083
Query: 1076 VAILFKVTHPQKALPPVLEASMYAMASILS 1105
L ++ P KA+ + E + + ++L+
Sbjct: 1084 ALFLRRMKAPNKAMSALDEKVINTLVTVLT 1113
>gi|431907961|gb|ELK11568.1| Putative ATP-dependent RNA helicase YTHDC2 [Pteropus alecto]
Length = 1438
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 408/1189 (34%), Positives = 625/1189 (52%), Gaps = 152/1189 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 49 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 108
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 109 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 157
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 158 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 215
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 216 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 275
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 276 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 322
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 323 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 382
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 383 VKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRTVPN 442
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 443 VTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 502
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GAD KA +G AL + Q E
Sbjct: 503 ENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGADVHSKASNGWMALDWAKHFGQTE 562
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 563 IVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 622
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + + GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 623 NICHNCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 682
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 683 KNPPTGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 742
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 743 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 802
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 803 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 862
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 863 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 920
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 921 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 980
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAG--GAKVRLHPHSLNFKLSFKK---------- 954
A L+AG+YP + + R V G KVR HP S+ + +KK
Sbjct: 981 AALVAGMYPNLVHV------DRENVLLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAA 1034
Query: 955 -----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDD 1008
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1035 IQALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPTSFRAD 1091
Query: 1009 DMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIY 1068
+ +D +D E++D+T+ + +D WL F + +
Sbjct: 1092 GIPNDSSDS--------EMEDRTTANLA-----------ALKLDEWLSFKLEPEAASLLL 1132
Query: 1069 CLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1133 QLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1181
>gi|350414377|ref|XP_003490298.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Bombus
impatiens]
Length = 1157
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 414/1179 (35%), Positives = 638/1179 (54%), Gaps = 152/1179 (12%)
Query: 14 QKQQQQQSPTVAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTS 72
++ + +++P + E TRI ++ L L + D+ F ++ + ER +H++ ++G+ S
Sbjct: 3 RRNRTKKAPLIGEDTRIAVNLTLKKLLETHDQKELEFPSSYTAEERGYIHKLAHELGLKS 62
Query: 73 KSSGRGKQRRVSVCKSKKRVETDKGKEILPS---LTFSEGSKLVLQDLFTHYPPDDGEPG 129
KS G+G R ++V K + G I+ + + + S+ + +L +P + E
Sbjct: 63 KSRGKGTNRFLTVYKRE-------GSTIVQADAVIKLQKASRQSIYNLLQAFPLNHKECQ 115
Query: 130 EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLP 189
+ L ++ R D+ + + ++ + +I + ++ R LP
Sbjct: 116 DLLPP-----IERERPPNTDVSVN---TNTKAMGRLNNSVPQIPQLKTNFDVLNYRKALP 167
Query: 190 ISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISAT 249
I SF++ I +++NQVV+I GETG GKTTQVPQF+LEH + + C+I+CTQPRR+SA
Sbjct: 168 IFSFREDILDALNTNQVVIIGGETGSGKTTQVPQFILEHCQQRQQPCRIICTQPRRLSAV 227
Query: 250 SVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNK 309
SVAER++ ER E IG GY+IRLES+ + + +CTNGVLLR L++ G S L
Sbjct: 228 SVAERVAFERDEKIGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMA-GDSAL------ 280
Query: 310 PAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFG 369
S +TH+I+DE+HERDR+ DF+L ++D + + L+L+LMSATLD + F +YF
Sbjct: 281 ------STVTHVIMDEVHERDRFCDFLLIALKDAIQKHKSLKLVLMSATLDVNIFVKYFN 334
Query: 370 GCPVIQVPGFTYPVKSFYLEDVLSIL--------------------------------KS 397
C V+ V G +Y V +++LEDVL + +
Sbjct: 335 KCAVVNVLGRSYDVDTYFLEDVLKMTGYMTKEMLSKRKEFMNKKDQHKVLETWTQYKPQQ 394
Query: 398 AESNHLDSASLI-----------VPNE---DPELTEENKSTLDEAISLAWSNDEFDMLLE 443
+ SN ++ ++ VP + +P L EE +D++IS AW D +
Sbjct: 395 SGSNTMNERCILPAPILAQQNEPVPEKIKLEPWLAEE----MDKSISEAWLRGGEDNFAQ 450
Query: 444 LVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLG 502
L+ S NV +YQH+ T +TPLM+ AGKG + LL+LGA+ L+A + TAL
Sbjct: 451 LLYFILSENVSVDYQHSTTFVTPLMIAAGKGCINTTEQLLNLGANLNLRAANEWTALDWA 510
Query: 503 EQENQPEVAQIIKKHMEN---ALSDSMKQQ------------LLDKYLATVNPELIDLVL 547
+ NQ E A++I+ +M+ L D K LLD Y T + + I+ L
Sbjct: 511 KNMNQAECAELIEAYMKTYDCTLQDETKVHAKDVSLSEEDKFLLDVYQHTFDDDKINYDL 570
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK---FVIIPLHSMVPS 604
+ QL+ I + G++LVFLPG++DI R+++ N ++ SK + + LHS + +
Sbjct: 571 LFQLILHIHLKMPPGSLLVFLPGYDDIVTMREKI--NNEEKEMSKGLRYNLYVLHSNMQT 628
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
QKKVFK P G RKIILSTNIAET+ITIDDVVYVIDSG++KEKS+D + V TL+S+W
Sbjct: 629 CDQKKVFKPSPVGSRKIILSTNIAETSITIDDVVYVIDSGKVKEKSFDALSGVCTLKSNW 688
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-N 723
+S+A AKQR GRAGRC+ GICY L+S +R S+ +Q PEI R P++ELCL K L P N
Sbjct: 689 ISQACAKQRKGRAGRCRKGICYRLFSAVRYNSMEPYQTPEILRSPLQELCLYTKHLAPGN 748
Query: 724 CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
I +FL + L+PP +V RNA+ +L+ I AL E +TELG L L + P + KML +
Sbjct: 749 TPIAEFLDRALEPPSNVVTRNAVQLLKTIDALDPWEDLTELGSHLLDLPIEPRLGKMLLY 808
Query: 784 AILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFE 843
A+++ CLDP LT+ C+ Y+DPF LP+ P++K+ ATAA+ A+ SD +AV+ AF+
Sbjct: 809 AVVLKCLDPVLTIVCSLAYKDPFILPLEPSQKRAATAARKRFAT--NTYSDHMAVLRAFQ 866
Query: 844 CWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNA 899
W+NA+ G+E FC Q F+S+ VM M++GMR QL +L +GF+ P D+ + N+
Sbjct: 867 GWQNARASGKERTFCEQNFISAAVMEMVVGMRTQLLGQLRASGFVRARGPGDIRDLNSNS 926
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL--NFKLSFKKTDD 957
++ A L AGLYP + RL H R T KV HP S ++ S + T
Sbjct: 927 ENWAVVKAALTAGLYPNLIRLDREHLQLR----TQKEVKVSFHPSSTLRDYPKSPRMTST 982
Query: 958 -----------CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
C ++Y+E++R HV+ T++ PL + L PA + D
Sbjct: 983 QTYAANVEALPCDWLLYEEMSRTGRFCHVKMVTLINPLTVALFC-----GPARLSVDVIY 1037
Query: 1007 DDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQ 1066
+ + E+ESD E+D+ G +D W+ F
Sbjct: 1038 E----AESVPESESDS---EVDESNEG-------------TIFKLDDWVVFKLDPETARF 1077
Query: 1067 IYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
LR++ + L ++ P KA+ + E + + S+++
Sbjct: 1078 FLHLRQKWNALFLRRMKTPNKAMSQLDEKVVSTLVSVIT 1116
>gi|348575085|ref|XP_003473320.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Cavia
porcellus]
Length = 1438
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 405/1188 (34%), Positives = 624/1188 (52%), Gaps = 150/1188 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 49 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 108
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 109 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 157
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 158 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 215
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 216 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 275
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 276 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 322
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 323 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIHIQGRPFE 382
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 383 VKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRTVPN 442
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E L+E++ + L D +S W + + D ++ L +
Sbjct: 443 VTEEYDLLDDGGDAVFSQLSEKDVNCLEPWLIKEMDTCLSDIWLHKDVDAFAQVFHLILT 502
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 503 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 562
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 563 IVDLLESYSASLEFGNLDESSLVQTNGNDLSVEDRELLKAYHHSFDDEKVDLDLIMHLLY 622
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F + ++ + LHS + + QKKV
Sbjct: 623 NICHSCDTGAVLIFLPGYDEIVGLRDRILFDDKRFADNAHRYQVFMLHSNMQTSDQKKVL 682
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 683 KTPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 742
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 743 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPINCTIADFL 802
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 803 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 862
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP P++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 863 DPILTIACTLAYRDPFVLPTQPSQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 920
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 921 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 980
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 981 AALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAI 1035
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1036 QALPTD---WLIYDEMTRAYRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRADG 1092
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++D+T+ + +D WL F + +
Sbjct: 1093 IPNDSSDS--------EMEDRTTANLA-----------ALKLDEWLNFKLEPEAASLLLQ 1133
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1134 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1181
>gi|383409739|gb|AFH28083.1| putative ATP-dependent RNA helicase YTHDC2 [Macaca mulatta]
Length = 1430
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 404/1178 (34%), Positives = 618/1178 (52%), Gaps = 149/1178 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFLRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 375 VKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENTFKPESQRQRTVPN 434
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 435 VTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 494
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 495 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 554
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 555 IVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 614
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F T ++ + LHS + + QKKV
Sbjct: 615 NICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVL 674
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 675 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 734
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 735 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 794
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 795 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 854
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 855 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARS 912
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 913 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 972
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 AALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAI 1027
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1028 KALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRVDG 1084
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++DKT+ + +D WL F + +
Sbjct: 1085 IPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLNFKLEPEAASLLLQ 1125
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1126 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1163
>gi|269847874|ref|NP_073739.3| probable ATP-dependent RNA helicase YTHDC2 [Homo sapiens]
gi|239938805|sp|Q9H6S0.2|YTDC2_HUMAN RecName: Full=Probable ATP-dependent RNA helicase YTHDC2
gi|187950589|gb|AAI37286.1| YTH domain containing 2 [Homo sapiens]
Length = 1430
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 403/1178 (34%), Positives = 620/1178 (52%), Gaps = 149/1178 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS------LI 409
VK +LED+L +LK SA+ N S L
Sbjct: 375 VKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPESQRQRTVLN 434
Query: 410 VPNED-----------PELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
V +E +LTE++ + L D +S W + + D ++ L +
Sbjct: 435 VTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 494
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 495 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 554
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 555 IVDLLESYSATLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 614
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F T ++ + LHS + + QKKV
Sbjct: 615 NICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVL 674
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 675 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 734
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 735 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 794
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 795 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 854
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 855 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARS 912
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 913 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 972
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 AALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAI 1027
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1028 KALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRVDG 1084
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++DKT+ + +D WL+F + +
Sbjct: 1085 IPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLHFTLEPEAASLLLQ 1125
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1126 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1163
>gi|395831759|ref|XP_003788959.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Otolemur
garnettii]
Length = 1436
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 407/1188 (34%), Positives = 625/1188 (52%), Gaps = 150/1188 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F + F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 47 IDEEVKIAVNIALERFRYGEQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 106
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 107 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 155
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 156 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 213
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 214 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 273
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 274 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 320
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 321 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 380
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 381 VKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRTVPN 440
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 441 VTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 500
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 501 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 560
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 561 IVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 620
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 621 NICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 680
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 681 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 740
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 741 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 800
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 801 MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 860
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 861 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 918
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 919 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 978
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 979 AALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAI 1033
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1034 QALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRVDG 1090
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++D+T+ + +D WL F + +
Sbjct: 1091 IPNDSSDS--------EMEDRTTANLA-----------ALKLDEWLNFKLEPEAASLLLQ 1131
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1132 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1179
>gi|403256107|ref|XP_003920739.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Saimiri
boliviensis boliviensis]
Length = 1430
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 404/1178 (34%), Positives = 619/1178 (52%), Gaps = 149/1178 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 375 VKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENTFKPESQRQRTVPN 434
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 435 VTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 494
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + E
Sbjct: 495 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGHTE 554
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 555 IVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 614
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 615 NICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 674
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 675 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 734
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 735 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 794
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 795 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 854
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+ACA YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 855 DPILTIACALAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 912
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 913 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 972
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 AALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAI 1027
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1028 QALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRVDG 1084
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++DKT+ + +D WL F + +
Sbjct: 1085 IPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLNFKLEPEAASLLLQ 1125
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1126 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1163
>gi|126320676|ref|XP_001370066.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Monodelphis
domestica]
Length = 1447
Score = 637 bits (1643), Expect = e-179, Method: Compositional matrix adjust.
Identities = 402/1177 (34%), Positives = 623/1177 (52%), Gaps = 147/1177 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 58 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 117
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + + +K ++ L +P + E E L +
Sbjct: 118 TV----KKKDGSETAHAMMTCSLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 166
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 167 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 224
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 225 DNKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERREK 284
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 285 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 331
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 332 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 391
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N + S VPN
Sbjct: 392 VKEMFLEDILRSTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENSIKPESQRQRTVPN 451
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 452 VTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 511
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G + V L+S+GA+ KA +G AL + Q E
Sbjct: 512 ENVSVDYRHSETSATALMVAAGRGFLSQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 571
Query: 510 VAQIIKKHM---------ENALS-------DSMKQQLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + E++L ++ ++LL Y + + E +DL LI LL
Sbjct: 572 IVDLLESYSASLEFGNLDESSLVQANGSDLNAEDRELLKAYHHSFDDEKVDLDLIMHLLY 631
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 632 NICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 691
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 692 KNPPSGIRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNYVTMLKMVWISKASAI 751
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 752 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPINCPIADFL 811
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 812 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 871
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 872 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 929
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 930 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 989
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 990 AALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAL 1044
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDM 1010
TD ++YDE+TR ++R C+ V P+ ++V P + +
Sbjct: 1045 QALPTD---WLIYDEMTRAHRIANIRCCSAVTPV-------TVSVFCGPARLASNALQEP 1094
Query: 1011 SDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCL 1070
S D +D E++D+T+ + +D WL F + + L
Sbjct: 1095 SSFRVDGVPNDSSDSEMEDRTTANLA-----------ALKLDEWLNFKMDPEAASLLLQL 1143
Query: 1071 RERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
R++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1144 RQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1180
>gi|426233785|ref|XP_004010894.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Ovis aries]
Length = 1431
Score = 637 bits (1643), Expect = e-179, Method: Compositional matrix adjust.
Identities = 404/1164 (34%), Positives = 616/1164 (52%), Gaps = 152/1164 (13%)
Query: 49 FDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSE 108
F ++L++ ERA +H + + +G+ SKS G+G R ++V K+ + + + + +
Sbjct: 67 FPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTV----KKKDGSETAHAMMTCNLTH 122
Query: 109 GSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPK-MSKAEIAMKVES 167
+K ++ L +P + E E L + RG + + + MSK + ++ +
Sbjct: 123 NTKHAVRSLIQRFPVTNKERTELLPKTE-------RGNVFAVEAENREMSKT--SGRLNN 173
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
+I + R LP+ ++ I + N+VVLI GETG GKTTQ+PQFLL+
Sbjct: 174 GIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLD 233
Query: 228 HIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
+ G C+I CTQPRR++A +VAER++ ER E IG IGY+IRLES+ + + FCT
Sbjct: 234 DCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCT 293
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
NGVLLR L++ +S +TH+IVDE+HERDR+SDF+L +RD+L +
Sbjct: 294 NGVLLRTLMA-------------GDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKH 340
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--------SILK--- 396
P L+LIL SA LD + F +YFG CPVI + G + VK +LED+L +LK
Sbjct: 341 PTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKK 400
Query: 397 ----------------SAESNHLDSAS---LIVPNEDPE--------------LTEENKS 423
SA+ N S +PN E LTE++ +
Sbjct: 401 EKQREEKQQTTLTEWYSAQENTFKPESQRQRAIPNVTEEYDLLDDGGDAVFSQLTEKDVN 460
Query: 424 TL--------DEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGR 474
L D +S W + + D ++ L + NV +Y+H+ T T LMV AG+G
Sbjct: 461 CLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGF 520
Query: 475 VGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH-----MENALSDSMKQ- 528
V L+S+GA+ KA +G AL + Q E+ +++ + N S+ Q
Sbjct: 521 SSQVEQLISMGANIHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQT 580
Query: 529 ----------QLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTR 578
+LL Y + + E +DL LI LL IC E GAIL+FLPG+++I R
Sbjct: 581 NGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCEAGAILIFLPGYDEIVGLR 640
Query: 579 DRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
DR+L + F + ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++D
Sbjct: 641 DRILFDDKRFADNAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVND 700
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
VV+VIDSG++KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR +
Sbjct: 701 VVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN 760
Query: 697 LPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL 755
+ +FQ PE+ R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+
Sbjct: 761 MLEFQTPELLRMPLQELCLHTKLLAPVNCAIADFLMKAPEPPPALIVRNAVQMLKTIDAM 820
Query: 756 SLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEK 815
E +TELG L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K
Sbjct: 821 DAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQK 880
Query: 816 KRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMR 875
+ A + + G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR
Sbjct: 881 RAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMR 938
Query: 876 KQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
QL +L +GF+ D+ + N+ ++ A L+AG+YP + + R V
Sbjct: 939 TQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPHLVHV------DRENV 992
Query: 932 ETAG--GAKVRLHPHSLNFKLSFKK---------------TDDCPLMVYDEITRGDGGMH 974
AG KVR HP S+ + +KK TD ++YDE+TR +
Sbjct: 993 VLAGPKEKKVRFHPTSVLSQPQYKKIPPANGQTAAIQALPTD---WLIYDEMTRAHRIAN 1049
Query: 975 VRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDDMSDDDADENESDEDCMEIDDKTSG 1033
+R C+ V P+ +L+ +A E D + +D +D E++D+T+
Sbjct: 1050 IRCCSAVTPVTVLVFCGPARLASNALQEPSSFRADGIPNDSSDS--------EMEDRTTA 1101
Query: 1034 QHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVL 1093
T+ +D WL F + + LR++ L ++ P K V
Sbjct: 1102 NLA-----------TLKLDEWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVD 1150
Query: 1094 EASMYAMASILSYDGFS-GISLPA 1116
EA++ A+ ++LS + S G+ P+
Sbjct: 1151 EATIRAIIAVLSTEEQSAGLQQPS 1174
>gi|260829479|ref|XP_002609689.1| hypothetical protein BRAFLDRAFT_123593 [Branchiostoma floridae]
gi|229295051|gb|EEN65699.1| hypothetical protein BRAFLDRAFT_123593 [Branchiostoma floridae]
Length = 1907
Score = 637 bits (1642), Expect = e-179, Method: Compositional matrix adjust.
Identities = 376/981 (38%), Positives = 561/981 (57%), Gaps = 98/981 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP++ ++VI TV+ NQVVLI+GETG GKTTQVPQF+L+ C+I+CTQPR
Sbjct: 487 RRTLPVAVLQEVIVKTVNENQVVLIAGETGSGKTTQVPQFILDDAQRSNRPCRIICTQPR 546
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
RISA +VAER++ ERGE IG +GY+IRLES+ + + FCTNGVLLR L+
Sbjct: 547 RISALTVAERVASERGEKIGQTVGYQIRLESRVSPRTLLTFCTNGVLLRTLMG------- 599
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
++ +TH+IVDEIHERDR+SDF+L +R+ML + L+++LMSATL+ + F
Sbjct: 600 ------GDSALTTITHVIVDEIHERDRFSDFLLIKLREMLGYFKGLKVVLMSATLNTELF 653
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVL-------------------------SILKSAE 399
QYFG CP+I G + V F+LEDVL S+ + +
Sbjct: 654 QQYFGSCPIIN--GNLFDVTEFFLEDVLRSTNYSNQKMQKYKKERGQLEQQQSSLDQWYQ 711
Query: 400 SNHLDSASLIVPNEDPELTEE-NKSTLDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQ 457
+ + ++ P E +LT+ + LD A + ND D ++L L S NV +Y+
Sbjct: 712 QSGTPAPGVVSPKE--QLTQHLAEKDLDTAQQEDYENDA-DAYVQLFHLIMSENVSVDYR 768
Query: 458 HTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH 517
H+ T T LM+ AG+G + V LL+LGA+ L+A +G TAL + Q + ++++ +
Sbjct: 769 HSETCSTTLMIAAGRGNMAAVEQLLALGANINLRAPNGLTALDWARKFGQTDTVEVLEAY 828
Query: 518 M---ENALSD------------SMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDG 562
+ E +SD + ++LL Y + + E +DL LI LL IC E+G
Sbjct: 829 IASSEITVSDDTLLVSESSQLSTEDRELLKAYHQSFDDEHVDLDLILCLLFNICSSQEEG 888
Query: 563 AILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
AILVFLPG+E+I RD ++ + F DTS++ + LHS + S QK+VF++ P G RKI
Sbjct: 889 AILVFLPGYEEIVTLRDAIMWDDKRFSDTSRYQVYTLHSAMQSGDQKRVFQQAPAGVRKI 948
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
ILSTNIAET++TI+DVV+VIDSG++KEKS+D +VS L+S WVSKASA+QR GRAGRC+
Sbjct: 949 ILSTNIAETSVTINDVVFVIDSGKVKEKSFDALTSVSMLKSVWVSKASAQQRKGRAGRCR 1008
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD-PNCNIEDFLQKTLDPPVSV 740
G+C+HL+S++R SL ++Q PE+ R P++ELCLQ KLL PN I +FL K +PP +
Sbjct: 1009 PGVCFHLFSRVRYESLQEYQDPELLRTPLQELCLQTKLLSAPNTPIAEFLAKAPEPPAFL 1068
Query: 741 TIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACAS 800
+RNA+ +L+ + AL + E +TELG + L + P ++KM+ +++++ CLDP LT+ACA
Sbjct: 1069 VLRNAVQLLKTVDALDMWEDLTELGHHMVDLPIEPRLAKMVLYSVVLKCLDPVLTIACAL 1128
Query: 801 DYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQ 860
YRDPF LP P++K+ A + + ++ G SD +A++ AF+ W+ AK G E FC +
Sbjct: 1129 AYRDPFILPNQPSQKRAAVYCRKKFSA--GAYSDHMALLRAFQGWQKAKSDGWERSFCEK 1186
Query: 861 YFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPM 916
F+ M M+ GMR QL +L +GF+ D+ + N+ +I A L AG YP
Sbjct: 1187 NFLCQATMEMIFGMRTQLLGQLRASGFVRARGGGDIRDLNTNSENWAVIKAALCAGSYPN 1246
Query: 917 VARLRPPHKNGRRFVETAGGAKVRLHPHSL-----NFKLSF-----KKTDDCP--LMVYD 964
+ R+ ++ T VR H S+ N K++ + P +VY+
Sbjct: 1247 MVRV----DRENLWLTTQMEKSVRFHNTSVLGQAANPKVTVALSHAQSVTKLPTDWLVYE 1302
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDC 1024
EI+R +VR CT++ P+ + + A + + + D+ DD EN SD
Sbjct: 1303 EISRAHRYAYVRCCTLMSPVTVAIFAGPSRLPLDALTDPNAPDNRPGGDDQFENYSD--- 1359
Query: 1025 MEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTH 1084
+ G+ GEN +K T +D W+ F + + LR + L ++
Sbjct: 1360 ------SGGEEGEN-----NKRATTKLDDWISFKLDSEAAHLLLQLRFKWHSLFLRRMRA 1408
Query: 1085 PQKALPPVLEASMYAMASILS 1105
P K V E + A+ +LS
Sbjct: 1409 PAKPWSQVDEGVIRAVIGVLS 1429
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 201/355 (56%), Gaps = 45/355 (12%)
Query: 47 YTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTF 106
Y F ++L++ ERA +H C+ +G+ +KS G+G R +++ K R L + TF
Sbjct: 96 YEFPSSLTSVERAFIHRYCQSLGIKTKSRGKGSNRYLTIFKKDSRTMG------LGTATF 149
Query: 107 S--EGSKLVLQDLFTHYPPDDGEPGE-------KLDANQSRKSDKTRGKRVDIFCKPKMS 157
S ++ L +P E E + SR ++ G +++
Sbjct: 150 SLCRSARHHTHTLLQRFPITGRERQELMPRTERGIGEGHSRDGNRASG------LNGRLN 203
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
+V S+ E D N R+ LP++ ++VI TV+ NQVVLI+GETG GK
Sbjct: 204 NG--IQQVPPPRSQSEYD-NFRRT------LPVAVLQEVIVKTVNENQVVLIAGETGSGK 254
Query: 218 TTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG 277
TTQVPQF+L+ C+I+CTQPRRISA +VAER++ ERGE IG +GY+IRLES+
Sbjct: 255 TTQVPQFILDDAQRSNRPCRIICTQPRRISALTVAERVASERGEKIGQTVGYQIRLESRV 314
Query: 278 GKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFML 337
+ + FCTNGVLLR L+ ++ +TH+IVDEIHERDR+SDF+L
Sbjct: 315 SPRTLLTFCTNGVLLRTLMG-------------GDSALTTITHVIVDEIHERDRFSDFLL 361
Query: 338 AIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+R+ML + L+++LMSATL+ + F QYFG CP+I G + V F+LEDVL
Sbjct: 362 IKLREMLGYFKGLKVVLMSATLNTELFQQYFGSCPIIN--GNLFDVTEFFLEDVL 414
>gi|114601166|ref|XP_517881.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform 2 [Pan
troglodytes]
gi|410213520|gb|JAA03979.1| YTH domain containing 2 [Pan troglodytes]
gi|410259616|gb|JAA17774.1| YTH domain containing 2 [Pan troglodytes]
gi|410298748|gb|JAA27974.1| YTH domain containing 2 [Pan troglodytes]
gi|410335283|gb|JAA36588.1| YTH domain containing 2 [Pan troglodytes]
Length = 1430
Score = 637 bits (1642), Expect = e-179, Method: Compositional matrix adjust.
Identities = 402/1178 (34%), Positives = 621/1178 (52%), Gaps = 149/1178 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
++VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ESKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS------LI 409
VK +LED+L +LK SA+ N S L
Sbjct: 375 VKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPESQRQRTVLN 434
Query: 410 VPNED-----------PELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
V +E +LTE++ + L D +S W + + D ++ L +
Sbjct: 435 VTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 494
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 495 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 554
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 555 IVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 614
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 615 NICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 674
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 675 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 734
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 735 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 794
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 795 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 854
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 855 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARS 912
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 913 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 972
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 AALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAI 1027
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1028 KALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRVDG 1084
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++DKT+ + +D WL+F + +
Sbjct: 1085 IPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLHFKLEPEAASLLLQ 1125
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1126 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1163
>gi|432114676|gb|ELK36515.1| Putative ATP-dependent RNA helicase YTHDC2 [Myotis davidii]
Length = 1365
Score = 637 bits (1642), Expect = e-179, Method: Compositional matrix adjust.
Identities = 403/1163 (34%), Positives = 619/1163 (53%), Gaps = 150/1163 (12%)
Query: 49 FDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSE 108
F ++L++ ERA +H + + +G+ SKS G+G R ++V K+ + + + + +
Sbjct: 3 FPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTV----KKKDGSETAHAMMTCNLTH 58
Query: 109 GSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPK-MSKAEIAMKVES 167
+K ++ L +P + E E L + RG + + + MSK + ++ +
Sbjct: 59 NTKHAVRSLIQRFPVTNKERTELLPKTE-------RGNVFAVEAENREMSKT--SGRLNN 109
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
+I + R LP+ ++ I + N+VVLI GETG GKTTQ+PQFLL+
Sbjct: 110 GIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLD 169
Query: 228 HIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
+ G C+I CTQPRR++A +VAER++ ER E IG IGY+IRLES+ + + FCT
Sbjct: 170 DCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCT 229
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
NGVLLR L++ +SA+TH+IVDE+HERDR+SDF+L +RD+L +
Sbjct: 230 NGVLLRTLMA-------------GDSTLSAVTHVIVDEVHERDRFSDFLLTKLRDLLQKH 276
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--------SILK--- 396
P L+LIL SA LD + F +YFG CPVI + G + VK +LED+L +LK
Sbjct: 277 PTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKK 336
Query: 397 ----------------SAESNHLDSAS---LIVPNEDPE--------------LTEENKS 423
SA+ N + S +PN E LTE++ +
Sbjct: 337 EKQREEKQQTTLTEWYSAQENTVKPESQRQRTIPNVTEEYDLLDDGGDAVFSQLTEKDVN 396
Query: 424 TL--------DEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGR 474
L D +S W N + + ++ L + NV +Y+H+ T T LMV AG+G
Sbjct: 397 CLEPWLIKEMDACLSDIWLNKDVEAFAQIFHLILTENVSVDYRHSETSATVLMVAAGRGF 456
Query: 475 VGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHM---------ENALS-- 523
V L+S+GA+ KA +G AL + Q EV +++ + E++L
Sbjct: 457 SSQVEQLISMGANVHSKASNGWMALDWAKHFGQTEVVDLLESYSASLEFGNLDESSLVQT 516
Query: 524 -----DSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTR 578
++ ++LL Y + + E +DL LI LL IC + GAIL+FLPG+++I R
Sbjct: 517 NGSDLNAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLR 576
Query: 579 DRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
DR+L + F +T ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++D
Sbjct: 577 DRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVND 636
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
VV+VIDSG++KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR +
Sbjct: 637 VVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN 696
Query: 697 LPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL 755
+ +FQ PE+ R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+
Sbjct: 697 MLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAM 756
Query: 756 SLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEK 815
E +TELG L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K
Sbjct: 757 DAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQK 816
Query: 816 KRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMR 875
+ A + + G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR
Sbjct: 817 RAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMR 874
Query: 876 KQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
QL +L +GF+ D+ + N+ ++ A L+AG+YP + H + V
Sbjct: 875 TQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENLV 929
Query: 932 ETAGG-AKVRLHPHSLNFKLSFKK---------------TDDCPLMVYDEITRGDGGMHV 975
T KVR HP S+ + +KK TD ++YDE+TR ++
Sbjct: 930 LTGSKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTD---WLIYDEMTRAHRIANI 986
Query: 976 RNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDDMSDDDADENESDEDCMEIDDKTSGQ 1034
R C+ V P+ +L+ +A E D + +D +D E++D+T+
Sbjct: 987 RCCSAVTPVTVLVFCGPARLASNALQESSSFRADGIPNDSSDS--------EMEDRTTAN 1038
Query: 1035 HGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLE 1094
+ +D WL F + + LR++ L ++ P K V E
Sbjct: 1039 LA-----------ALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDE 1087
Query: 1095 ASMYAMASILSYDGFS-GISLPA 1116
A++ A+ + LS + S G+ P+
Sbjct: 1088 ATIRAIIAALSTEEQSAGLQQPS 1110
>gi|405968436|gb|EKC33508.1| Putative ATP-dependent RNA helicase YTHDC2 [Crassostrea gigas]
Length = 1572
Score = 637 bits (1642), Expect = e-179, Method: Compositional matrix adjust.
Identities = 402/1171 (34%), Positives = 639/1171 (54%), Gaps = 130/1171 (11%)
Query: 24 VAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRR 82
+ E RI + ++ F ++++ F ++L+ ERA VH C +G+ KS G+G R
Sbjct: 55 IGEEVRISLHLAIERFRRNEEQKELEFPSSLTATERAYVHRYCDTVGLKHKSKGKGNNRL 114
Query: 83 VSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGE---KLDANQSRK 139
++V K E+++ + SL S+ + +L +P E E +++ N +
Sbjct: 115 LTVTKK----ESNQTQTSASSLNMIRNSRQQICNLLQRFPLTTKERQELMPQMERNPAYD 170
Query: 140 SDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITS 199
+++ ++KA I K+ + ++I ++ RS LP+ K+ I
Sbjct: 171 ANR------------DIAKATIG-KLNNGVAQIPPARISTELDSFRSTLPVFQHKEEIIR 217
Query: 200 TVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVER 259
+++SN+ +LI+GETG GKTTQ+PQ +L+ + + C+I+CTQPRRI+A S+AER+S ER
Sbjct: 218 SINSNRTLLITGETGSGKTTQIPQMILDDGTANNKRCRILCTQPRRIAALSIAERVSAER 277
Query: 260 GENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALT 319
GE IG +GY+IRLESK + + FCTNGVLLR L++ S +S +T
Sbjct: 278 GEKIGQTVGYQIRLESKTSPKTLLTFCTNGVLLRTLMNGSHS-------------LSTVT 324
Query: 320 HIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGF 379
H+IVDE+HERDR+SDF+L IRD L YPH++LILMSA+++ D F +YF CPV++ PG
Sbjct: 325 HVIVDEVHERDRFSDFLLTAIRDELSKYPHMKLILMSASMNVDLFIRYFNNCPVLRFPGN 384
Query: 380 TYPVKSFYLEDVLSI----------LKSAESN--------------HLDSASLIVPNED- 414
+ V+ +LEDVL LK + + +D +E+
Sbjct: 385 LFDVEEHFLEDVLKWTGYTNKKMEKLKKTQPDVANQQKQLSQWCKIQMDEVQTTAHSEEI 444
Query: 415 -----PELTEENKS----------------TLDEAISLAWSNDEFDMLLELVSLEGSPNV 453
EL EE K+ +DE +S W D +L+ L S NV
Sbjct: 445 EEKMAKELLEEGKTPQTADEKEELEPWLVKEMDELLSEIWLTGNEDCFSQLIHLIKSENV 504
Query: 454 -YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQ 512
+YQH+ T L+PLM+ A +G V LL+ GA+ +L+ + TAL ++ N EV +
Sbjct: 505 SVDYQHSETSLSPLMIAAARGFTAIVEHLLTFGANVKLQFSNDWTALDFAKRFNHEEVIE 564
Query: 513 IIKKHM---ENALSDSMK--------------QQLLDKYLATVNPELIDLVLIEQLLRKI 555
+++ +M E SD +K ++LL+ Y + + + +D+ LI L+ KI
Sbjct: 565 MLQAYMIEYEMGPSDDIKALDTVAARELSEEEKELLNLYQHSFDDDKVDIELILSLVIKI 624
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
S++GA+L+FLPG++DI R+ + + D ++V+ LHS + S QK+VFK P
Sbjct: 625 LSTSKEGAVLIFLPGYDDIVTLRE-AIGDSKSMDKFRYVLYTLHSSMQSNDQKRVFKSVP 683
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAG 675
G RKIIL+TNIAET+ITI+DVVYVIDSG++KEK++D ++S L+S+W+SKASA QR G
Sbjct: 684 QGVRKIILATNIAETSITINDVVYVIDSGKVKEKAFDALLSLSMLKSTWISKASALQRKG 743
Query: 676 RAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTL 734
RAGRC+ G+CYHL+S++R + + D+ PEI R P++E+CL KL+ P +C I +FL K
Sbjct: 744 RAGRCRPGVCYHLFSRIRHSMMQDYATPEILRYPLQEICLHTKLIAPIHCPIAEFLAKAP 803
Query: 735 DPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL 794
+PP + RNA+++L+ I AL E +TE+G L L + P + K++ ++I++ CLDP L
Sbjct: 804 EPPPYMVTRNAVLLLKQIDALDHFEDLTEIGYHLADLPLEPRLGKVVLYSIVLKCLDPVL 863
Query: 795 TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQE 854
T+ CA Y+DPF LP +P+ K+ A A+ +S SD + ++ AF+ W+ A+ E
Sbjct: 864 TIVCALAYKDPFMLPSAPHLKRAADQARRMYSS--NTFSDHMTLLRAFQGWQRARTDNCE 921
Query: 855 AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLM 910
+C + F+SS M M++GMR QL +L +GF+ D+ + N+ + A L
Sbjct: 922 RSYCEKNFLSSASMEMIVGMRTQLLGQLRASGFVRARGGGDIRDLNTNSENWAAVKAALC 981
Query: 911 AGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS-LNFKLSFKK-TDDCP--LMVYDEI 966
AG+YP +A++ +K+ + F + + G ++ H S L S KK P ++Y+E+
Sbjct: 982 AGIYPNLAKIE-KNKHYKMFSQKSSG--IKFHTSSVLRNSASLKKPAQSIPTEWILYEEM 1038
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCME 1026
+R + ++R CT + P+ + L I + P++ D E+ SD + E
Sbjct: 1039 SRYERSAYIRCCTAISPITVALFTGPIKL--PPESVRDGAKQHAMLHGGLEDSSDSEGEE 1096
Query: 1027 IDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQ 1086
+D T T+ D WL F + + LR + + L ++ P
Sbjct: 1097 KEDTT--------------KTTLQFDDWLSFKLDNETASLVLQLRHKWNCLFLRRMKAPS 1142
Query: 1087 KALPPVLEASMYAMASILSYDGFS-GISLPA 1116
K V EA + A+ S+LS + S G PA
Sbjct: 1143 KPWSQVDEAVIKAVISVLSNEEQSLGFQQPA 1173
>gi|301777390|ref|XP_002924113.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Ailuropoda melanoleuca]
Length = 1460
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 402/1178 (34%), Positives = 617/1178 (52%), Gaps = 149/1178 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 71 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 130
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 131 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 179
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 180 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 237
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 238 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 297
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 298 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 344
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 345 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 404
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 405 VKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRTVPN 464
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 465 VTEEYDLLDDSGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 524
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 525 ENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 584
Query: 510 VAQIIKK----------------HMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ H + + ++LL Y + + E +DL LI LL
Sbjct: 585 IVDLLESYSASLEFGNLDESSLVHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 644
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 645 NICHGCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 704
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 705 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 764
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 765 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 824
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 825 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 884
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 885 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 942
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 943 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 1002
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 1003 AALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAI 1057
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1058 QALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRADG 1114
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++D+T+ + +D WL F + +
Sbjct: 1115 IPNDSSDS--------EMEDRTTANLA-----------ALKLDEWLNFKLEPEAASLLLQ 1155
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
LR + L ++ P K V EA++ A+ ++LS +
Sbjct: 1156 LRHKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1193
>gi|397512911|ref|XP_003826777.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Pan paniscus]
Length = 1430
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 402/1178 (34%), Positives = 621/1178 (52%), Gaps = 149/1178 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
++VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ESKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS------LI 409
VK +LED+L +LK SA+ N S L
Sbjct: 375 VKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPESQRQRTVLN 434
Query: 410 VPNED-----------PELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
V +E +LTE++ + L D +S W + + D ++ L +
Sbjct: 435 VTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 494
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 495 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 554
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 555 IVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 614
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 615 NICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 674
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 675 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 734
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 735 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 794
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 795 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 854
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 855 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARS 912
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 913 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 972
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 AALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAI 1027
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1028 KALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRVDG 1084
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++DKT+ + +D WL+F + +
Sbjct: 1085 IPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLHFKLEPEAASLLLQ 1125
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1126 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1163
>gi|291410671|ref|XP_002721618.1| PREDICTED: YTH domain containing 2 [Oryctolagus cuniculus]
Length = 1533
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 400/1152 (34%), Positives = 610/1152 (52%), Gaps = 147/1152 (12%)
Query: 49 FDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSE 108
F ++L++ ERA +H + + +G+ SKS G+G R ++V K+ + + + + +
Sbjct: 169 FPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTV----KKKDGSETAHAMMTCNLTH 224
Query: 109 GSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPK-MSKAEIAMKVES 167
+K ++ L +P + E E L + RG + + + MSK + ++ +
Sbjct: 225 NTKHAVRSLIQRFPVTNKERTELLPKTE-------RGNVFAVEAENREMSKT--SGRLNN 275
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
+I + R LP+ ++ I + N+VVLI GETG GKTTQ+PQFLL+
Sbjct: 276 GIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLD 335
Query: 228 HIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
+ G C+I CTQPRR++A +VAER++ ER E IG IGY+IRLES+ + + FCT
Sbjct: 336 DCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCT 395
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
NGVLLR L++ +S +TH+IVDE+HERDR+SDF+L +RD+L +
Sbjct: 396 NGVLLRTLMA-------------GDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKH 442
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--------SILK--- 396
P L+LIL SA LD + F +YFG CPVI + G + VK +LED+L +LK
Sbjct: 443 PSLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKK 502
Query: 397 ----------------SAESNHLDSAS---LIVPNEDPE--------------LTEENKS 423
SA+ N L S VPN E LTE++ +
Sbjct: 503 EKQREEKQQTTLTEWYSAQENTLKPESQRQRTVPNVTEEYDLLDDGGDAAFSQLTEKDVN 562
Query: 424 TL--------DEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGR 474
L D +S W + + D ++ L + NV +Y+H+ T T LMV AG+G
Sbjct: 563 CLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGF 622
Query: 475 VGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH-----MENALSDSMKQ- 528
V L+S+GA+ KA +G AL + Q EV +++ + N S+ Q
Sbjct: 623 TSQVEQLISMGANVHSKASNGWMALDWAKHFGQTEVVDLLESYSASLEFGNLDESSLVQT 682
Query: 529 ----------QLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTR 578
+LL Y + + E +DL LI LL IC + GA+L+FLPG+++I R
Sbjct: 683 NGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLR 742
Query: 579 DRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
DR+L + F +T ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++D
Sbjct: 743 DRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVND 802
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
VV+VIDSG++KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR +
Sbjct: 803 VVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN 862
Query: 697 LPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL 755
+ +FQ PE+ R+P++ELCL KLL P NC + DFL K +PP ++ +RNA+ +L+ I A+
Sbjct: 863 MLEFQTPELLRMPLQELCLHTKLLAPVNCAVADFLMKAPEPPPALIVRNAVQMLKTIDAM 922
Query: 756 SLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEK 815
E +TELG L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K
Sbjct: 923 DAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQK 982
Query: 816 KRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMR 875
+ A + + G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR
Sbjct: 983 RAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMR 1040
Query: 876 KQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
QL +L +GF+ D+ + N+ ++ A L+AG+YP + H + V
Sbjct: 1041 TQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENVV 1095
Query: 932 ETA-GGAKVRLHPHSLNFKLSFKK---------------TDDCPLMVYDEITRGDGGMHV 975
T KVR HP S+ + +KK TD ++YDE+TR ++
Sbjct: 1096 LTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTD---WLLYDEMTRAHRIANI 1152
Query: 976 RNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQH 1035
R C+ V P+ +L+ P + + S AD +D E++D+T+
Sbjct: 1153 RCCSAVTPVTVLVFC-------GPARLASNALQEPSSFRADGIPNDSSDSEVEDRTTAHL 1205
Query: 1036 GENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEA 1095
+ +D WL F + + LR++ L ++ P K V EA
Sbjct: 1206 A-----------ALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEA 1254
Query: 1096 SMYAMASILSYD 1107
++ A+ ++LS +
Sbjct: 1255 TIRAIIAVLSTE 1266
>gi|338713357|ref|XP_001918336.2| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Equus caballus]
Length = 1434
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 408/1189 (34%), Positives = 623/1189 (52%), Gaps = 152/1189 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 46 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 105
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 106 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 154
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 155 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 212
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 213 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 272
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 273 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 319
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 320 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 379
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 380 VKEMFLEDILRTTGYTNKEMLKYKKENSEEEKQQTTLTEWYSAQENTFKPESQRQRTVPN 439
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 440 VTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 499
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 500 ENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 559
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 560 IVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 619
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GAIL+FLPG+++I RDR+L + F T ++ + LHS + + QKKV
Sbjct: 620 NICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVL 679
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 680 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 739
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 740 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 799
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNAI +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 800 MKAPEPPPALIVRNAIQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 859
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 860 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 917
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 918 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 977
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAG--GAKVRLHPHSLNFKLSFKK---------- 954
A L+AG+YP + + R V G KVR HP S+ + +KK
Sbjct: 978 AALVAGMYPNLVHV------DRENVLLTGPKEKKVRFHPTSVLSQPQYKKIPPTNGQAAA 1031
Query: 955 -----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDD 1008
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1032 IQALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRAD 1088
Query: 1009 DMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIY 1068
+ +D +D E++D+T+ + +D WL F + +
Sbjct: 1089 GIPNDSSDS--------EMEDRTTANLA-----------ALKLDEWLNFKLEPEAASLLL 1129
Query: 1069 CLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1130 QLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1178
>gi|395510586|ref|XP_003759555.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2, partial
[Sarcophilus harrisii]
Length = 1420
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 405/1187 (34%), Positives = 628/1187 (52%), Gaps = 148/1187 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 31 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 90
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + + +K ++ L +P + E E L +
Sbjct: 91 TV----KKKDGSETAHAMMTCSLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 139
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 140 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 197
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 198 DNKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERREK 257
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 258 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 304
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 305 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 364
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N + S VPN
Sbjct: 365 VKEMFLEDILRSTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENSIKPESQRQRTVPN 424
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 425 VTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 484
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G + V L+S+GA+ KA +G AL + Q E
Sbjct: 485 ENVSVDYRHSETSATALMVAAGRGFLSQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 544
Query: 510 VAQIIKKHM---------ENALS-------DSMKQQLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + E++L ++ ++LL Y + + E +DL LI LL
Sbjct: 545 IVDLLESYSASLEFGNLDESSLVQANGSDLNAEDRELLKAYHHSFDDEKVDLDLIMHLLC 604
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 605 NICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 664
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 665 KNPPSGIRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNYVTMLKMVWISKASAI 724
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 725 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPINCPIADFL 784
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 785 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 844
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 845 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 902
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 903 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 962
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 963 AALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAL 1017
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDM 1010
TD ++YDE+TR ++R C+ V P+ ++V P + +
Sbjct: 1018 QALPTD---WLIYDEMTRAHRIANIRCCSAVTPV-------TVSVFCGPARLASNALQEP 1067
Query: 1011 SDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCL 1070
S D +D E++D+T+ + +D WL F + + L
Sbjct: 1068 SSFRVDGVPNDSSDSEMEDRTTANLA-----------ALKLDEWLNFKMDPEAASLLLQL 1116
Query: 1071 RERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
R++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1117 RQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1163
>gi|296193949|ref|XP_002744748.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Callithrix
jacchus]
Length = 1429
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 406/1188 (34%), Positives = 626/1188 (52%), Gaps = 150/1188 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 40 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 99
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 100 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 148
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 149 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 206
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 207 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 266
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 267 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 313
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 314 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 373
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 374 VKEMFLEDILRTTGYTNKEMLKYKNEKQQEEKQQTTLTEWYSAQENTFKPESQRQRTVPN 433
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 434 VTDEYDLLDDGGDAIFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 493
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 494 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 553
Query: 510 VAQIIKKH--------------MENALSD--SMKQQLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + ++ SD + ++LL Y + + E +DL LI LL
Sbjct: 554 IVDLLESYSASLEFGNLDESPLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 613
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 614 NICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 673
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G +KIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 674 KNPPAGVQKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 733
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 734 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 793
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ IRNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 794 MKAPEPPPALIIRNAVQMLKTIDAMDTWEDMTELGYHLADLPVEPHLGKMVLCAVVLKCL 853
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 854 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 911
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 912 DGWERAFCEKNFLSQAAMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 971
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 972 AALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPVNGQAAAI 1026
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1027 QALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRVDG 1083
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++DKT+ + +D WL F + +
Sbjct: 1084 IPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLNFKLEPEAASLLLQ 1124
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1125 LRQKWHNLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1172
>gi|410948040|ref|XP_003980749.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Felis catus]
Length = 1411
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 402/1165 (34%), Positives = 611/1165 (52%), Gaps = 147/1165 (12%)
Query: 36 LDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETD 95
L+ F F ++L++ ERA +H + + +G+ SKS G+G R ++V K+ +
Sbjct: 34 LERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTV----KKKDGS 89
Query: 96 KGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPK 155
+ + + + +K ++ L +P + E E L + RG + + +
Sbjct: 90 ETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE-------RGNVFAVEAENR 142
Query: 156 -MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETG 214
MSK + ++ + +I + R LP+ ++ I + N+VVLI GETG
Sbjct: 143 EMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETG 200
Query: 215 CGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E IG IGY+IRLE
Sbjct: 201 SGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLE 260
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
S+ + + FCTNGVLLR L++ +S +TH+IVDE+HERDR+SD
Sbjct: 261 SRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVIVDEVHERDRFSD 307
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL-- 392
F+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G + VK +LED+L
Sbjct: 308 FLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRT 367
Query: 393 ------SILK-------------------SAESNHLDSAS---LIVPNEDPE-------- 416
+LK SA+ N S VPN E
Sbjct: 368 TGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRTVPNVTEEYDLLDDGG 427
Query: 417 ------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLT 461
LTE++ + L D +S W + + D ++ L + NV +Y+H+ T
Sbjct: 428 DAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILTENVSVDYRHSET 487
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKK----- 516
T LMV AG+G V L+S+GA+ KA +G AL + Q E+ +++
Sbjct: 488 SATALMVAAGRGFSSQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASL 547
Query: 517 -----------HMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAIL 565
H + + ++LL Y + + E +DL LI LL IC + GAIL
Sbjct: 548 EFGNLDESSLVHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHGCDAGAIL 607
Query: 566 VFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIIL 623
+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV K PP G RKIIL
Sbjct: 608 IFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIIL 667
Query: 624 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAG 683
STNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA QR GRAGRC+ G
Sbjct: 668 STNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPG 727
Query: 684 ICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTI 742
IC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL K +PP ++ +
Sbjct: 728 ICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIV 787
Query: 743 RNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDY 802
RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CLDP LT+AC Y
Sbjct: 788 RNAVHMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 847
Query: 803 RDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYF 862
RDPF LP ++K+ A + + G SD +A++ AF+ W+ A+ G E FC + F
Sbjct: 848 RDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNF 905
Query: 863 VSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVA 918
+S M +++GMR QL +L +GF+ D+ + N+ ++ A L+AG+YP V
Sbjct: 906 LSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNVV 965
Query: 919 RLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK---------------TDDCPLMV 962
H + V T KVR HP S+ + +KK TD ++
Sbjct: 966 -----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTD---WLI 1017
Query: 963 YDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDE 1022
YDE+TR ++R C+ V P+ +L+ +A E S AD +D
Sbjct: 1018 YDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEP-------SSFRADGVPNDS 1070
Query: 1023 DCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKV 1082
E++D+T+ + +D WL F + + LR++ L ++
Sbjct: 1071 SDSEMEDRTTANLA-----------ALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRM 1119
Query: 1083 THPQKALPPVLEASMYAMASILSYD 1107
P K V EA++ A+ ++LS +
Sbjct: 1120 RAPSKPWSQVDEATIRAIIAVLSTE 1144
>gi|244793002|ref|NP_001156485.1| probable ATP-dependent RNA helicase YTHDC2 [Mus musculus]
gi|239983830|sp|B2RR83.1|YTDC2_MOUSE RecName: Full=Probable ATP-dependent RNA helicase YTHDC2
gi|187957072|gb|AAI38264.1| YTH domain containing 2 [Mus musculus]
gi|219520864|gb|AAI71951.1| Ythdc2 protein [Mus musculus]
Length = 1445
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 403/1188 (33%), Positives = 624/1188 (52%), Gaps = 150/1188 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 56 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 115
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 116 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 164
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + ++ + R LP+ ++ I +
Sbjct: 165 RGNVFAVEAENREMSKT--SGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 222
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 223 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 282
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 283 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 329
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 330 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 389
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS-------- 407
VK +LED+L +LK SA+ N S
Sbjct: 390 VKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRAVAS 449
Query: 408 ------LIVPNEDP---ELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
L+ D +LTE++ + L D +S W + + D ++ L +
Sbjct: 450 VSEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 509
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 510 ENVSVDYRHSETSATALMVAAGRGFTSQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 569
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 570 IVDLLESYSASLEFGNLDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 629
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 630 NICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 689
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 690 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 749
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 750 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFL 809
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 810 MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 869
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 870 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 927
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 928 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 987
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + + T KVR HP S+ + +KK
Sbjct: 988 AALVAGMYPNLV-----HVDRENVILTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAI 1042
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1043 QALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRADG 1099
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++D+T+ + +D WL F + +
Sbjct: 1100 IPNDSSDS--------EMEDRTTANLA-----------ALKLDEWLNFKLEPEAASLLLQ 1140
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1141 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1188
>gi|281353451|gb|EFB29035.1| hypothetical protein PANDA_013369 [Ailuropoda melanoleuca]
Length = 1342
Score = 634 bits (1634), Expect = e-178, Method: Compositional matrix adjust.
Identities = 398/1153 (34%), Positives = 608/1153 (52%), Gaps = 149/1153 (12%)
Query: 49 FDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSE 108
F ++L++ ERA +H + + +G+ SKS G+G R ++V K+ + + + + +
Sbjct: 4 FPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTV----KKKDGSETAHAMMTCNLTH 59
Query: 109 GSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPK-MSKAEIAMKVES 167
+K ++ L +P + E E L + RG + + + MSK + ++ +
Sbjct: 60 NTKHAVRSLIQRFPVTNKERTELLPKTE-------RGNVFAVEAENREMSKT--SGRLNN 110
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
+I + R LP+ ++ I + N+VVLI GETG GKTTQ+PQFLL+
Sbjct: 111 GIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLD 170
Query: 228 HIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
+ G C+I CTQPRR++A +VAER++ ER E IG IGY+IRLES+ + + FCT
Sbjct: 171 DCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCT 230
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
NGVLLR L++ +S +TH+IVDE+HERDR+SDF+L +RD+L +
Sbjct: 231 NGVLLRTLMA-------------GDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKH 277
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--------SILK--- 396
P L+LIL SA LD + F +YFG CPVI + G + VK +LED+L +LK
Sbjct: 278 PTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKK 337
Query: 397 ----------------SAESNHLDSAS---LIVPNEDPE--------------LTEENKS 423
SA+ N S VPN E LTE++ +
Sbjct: 338 EKQREEKQQTTLTEWYSAQENTFKPESQRQRTVPNVTEEYDLLDDSGDAVFSQLTEKDVN 397
Query: 424 TL--------DEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGR 474
L D +S W + + D ++ L + NV +Y+H+ T T LMV AG+G
Sbjct: 398 CLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGF 457
Query: 475 VGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKK----------------HM 518
V L+S+GA+ KA +G AL + Q E+ +++ H
Sbjct: 458 SSQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVHT 517
Query: 519 ENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTR 578
+ + ++LL Y + + E +DL LI LL IC + GAIL+FLPG+++I R
Sbjct: 518 NGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLR 577
Query: 579 DRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
DR+L + F +T ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++D
Sbjct: 578 DRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVND 637
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
VV+VIDSG++KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR +
Sbjct: 638 VVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN 697
Query: 697 LPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL 755
+ +FQ PE+ R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+
Sbjct: 698 MLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAM 757
Query: 756 SLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEK 815
E +TELG L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K
Sbjct: 758 DTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQK 817
Query: 816 KRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMR 875
+ A + + G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR
Sbjct: 818 RAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMR 875
Query: 876 KQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
QL +L +GF+ D+ + N+ ++ A L+AG+YP + H + V
Sbjct: 876 TQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENVV 930
Query: 932 ETA-GGAKVRLHPHSLNFKLSFKK---------------TDDCPLMVYDEITRGDGGMHV 975
T KVR HP S+ + +KK TD ++YDE+TR ++
Sbjct: 931 LTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTD---WLIYDEMTRAHRIANI 987
Query: 976 RNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDDMSDDDADENESDEDCMEIDDKTSGQ 1034
R C+ V P+ +L+ +A E D + +D +D E++D+T+
Sbjct: 988 RCCSAVTPVTVLVFCGPARLASNALQEPSSFRADGIPNDSSDS--------EMEDRTTAN 1039
Query: 1035 HGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLE 1094
+ +D WL F + + LR + L ++ P K V E
Sbjct: 1040 LA-----------ALKLDEWLNFKLEPEAASLLLQLRHKWHSLFLRRMRAPSKPWSQVDE 1088
Query: 1095 ASMYAMASILSYD 1107
A++ A+ ++LS +
Sbjct: 1089 ATIRAIIAVLSTE 1101
>gi|354490378|ref|XP_003507335.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2-like [Cricetulus griseus]
Length = 1433
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 399/1181 (33%), Positives = 619/1181 (52%), Gaps = 155/1181 (13%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 44 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 103
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P N+
Sbjct: 104 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPV----------TNKKHSXLLP 149
Query: 144 RGKRVDIFC----KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITS 199
+ +R ++F +MSK + ++ + ++ + R LP+ ++ I
Sbjct: 150 KTERGNVFAVEAENREMSKT--SGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVK 207
Query: 200 TVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVER 259
+ N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER
Sbjct: 208 IIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAER 267
Query: 260 GENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALT 319
E IG IGY+IRLES+ + + FCTNGVLLR L++ +S +T
Sbjct: 268 RERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVT 314
Query: 320 HIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGF 379
H+IVDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G
Sbjct: 315 HVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGR 374
Query: 380 TYPVKSFYLEDVL--------SILK-------------------SAESNHLDSAS----- 407
+ VK +LED+L +LK SA+ N S
Sbjct: 375 PFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRA 434
Query: 408 ---------LIVPNEDP---ELTEENKSTL--------DEAISLAWSNDEFDMLLELVSL 447
L+ D +LTE++ + L D +S W + + D ++ L
Sbjct: 435 VASVSEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHL 494
Query: 448 EGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQEN 506
+ NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL +
Sbjct: 495 ILTENVSVDYRHSETSATALMVAAGRGFTSQVEQLISMGANVHSKASNGWMALDWAKHFG 554
Query: 507 QPEVAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQ 550
Q E+ +++ + N S+ Q +LL Y + + E +DL LI
Sbjct: 555 QTEIVDLLESYSASLEFGNLDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMH 614
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQK 608
LL IC + GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QK
Sbjct: 615 LLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQK 674
Query: 609 KVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
KV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKA
Sbjct: 675 KVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKA 734
Query: 669 SAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIE 727
SA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I
Sbjct: 735 SAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIA 794
Query: 728 DFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
DFL K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++
Sbjct: 795 DFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVL 854
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
CLDP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+
Sbjct: 855 KCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQK 912
Query: 848 AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPG 903
A+ G E FC + F+S M +++GMR QL +L +GF+ D+ + N+
Sbjct: 913 ARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWA 972
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK-------- 954
++ A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 VVKAALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQA 1027
Query: 955 -------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-E 1006
TD ++YDE+TRG ++R C+ V P+ +++ +A E
Sbjct: 1028 AAIQALPTD---WLIYDEMTRGHVIANIRCCSAVTPVTVVVFCGPARLASNALQEPSSFR 1084
Query: 1007 DDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQ 1066
D + +D +D E++D+T+ + +D WL F +
Sbjct: 1085 ADGIPNDSSDS--------EMEDRTTANLA-----------ALKLDEWLNFKLEPEAASL 1125
Query: 1067 IYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
+ LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1126 LLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1166
>gi|392342510|ref|XP_003754609.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Rattus
norvegicus]
Length = 1434
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 402/1187 (33%), Positives = 621/1187 (52%), Gaps = 148/1187 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 45 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 104
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 105 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 153
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + ++ + R LP+ ++ I +
Sbjct: 154 RGNVFAVEAENREMSKT--SGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 211
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 212 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 271
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 272 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 318
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 319 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 378
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS-------- 407
VK +LED+L +LK SA+ N S
Sbjct: 379 VKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRAVAS 438
Query: 408 ------LIVPNEDP---ELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
L+ D +LTE++ + L D +S W + + D ++ L +
Sbjct: 439 VSEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 498
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 499 ENVSVDYRHSETSATALMVAAGRGFTSQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 558
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 559 IVDLLESYSASLEFGNLDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 618
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + G L+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 619 NICHSCDAGXXLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 678
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 679 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 738
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 739 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFL 798
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 799 MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 858
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 859 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 916
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 917 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 976
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 977 AALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAI 1031
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDM 1010
TD ++YDE+TR ++R C+ V P+ +L+ P + +
Sbjct: 1032 QALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFC-------GPARLTSNALQEP 1081
Query: 1011 SDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCL 1070
S AD +D E++D+T+ + +D WL F + + L
Sbjct: 1082 SSFRADGIPNDSSDSEMEDRTTANLA-----------ALKLDEWLNFKLEPEAASLLLQL 1130
Query: 1071 RERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
R++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1131 RQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1177
>gi|345496316|ref|XP_001604084.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Nasonia
vitripennis]
Length = 1154
Score = 631 bits (1627), Expect = e-177, Method: Compositional matrix adjust.
Identities = 389/1095 (35%), Positives = 599/1095 (54%), Gaps = 116/1095 (10%)
Query: 15 KQQQQQSPTVAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTSK 73
+++ Q+ + E TRI ++ + + + D+ F ++ + ERA +H++ +++G+ SK
Sbjct: 3 RRKNQRHRDIGEDTRIAVNLTIKKLMETADQKELEFPSSYTAEERAYIHDLARQLGLKSK 62
Query: 74 SSGRGKQRRVSVCKSKKRVETDKGKEILPS---LTFSEGSKLVLQDLFTHYPPDDGEPGE 130
S GRG R ++V K + G I+ + + + S+ V+ +L P E E
Sbjct: 63 SRGRGANRFLTVFKRE-------GSTIVQADAVIKLQKTSRQVIYNLIKKCPL---ESKE 112
Query: 131 KLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPI 190
+ D + ++T V+ K +V L + + ++ R+ L +
Sbjct: 113 RRDLLPPTERERTVESEVNTNTKAMGRLNNSIPQVPQLKTNYD-------VLNFRNSLTV 165
Query: 191 SSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATS 250
+ ++ I T+ +NQVV+I+GETGCGKTTQ+PQF+LE+ K +TC+I+CTQPRR+SA S
Sbjct: 166 VTKREEILHTLSTNQVVIIAGETGCGKTTQIPQFILENCQQKNQTCRIICTQPRRLSAVS 225
Query: 251 VAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKP 310
VAER++ ER E IG GY+IRLES+ + + +CTNGVLLR L+ +
Sbjct: 226 VAERVAFERDEKIGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMGDDSA--------- 276
Query: 311 AKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG 370
++ +THIIVDE+HERDR+ DF+L ++D L Y L++ILMSAT+D F++YF
Sbjct: 277 ----LAMITHIIVDEVHERDRFCDFLLIALKDALVKYRSLKVILMSATIDTTIFTKYFNN 332
Query: 371 CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV-----------------PNE 413
CPV+ VPG + V +YLEDVL I+ L +V P+
Sbjct: 333 CPVVSVPGKLFDVDVYYLEDVLKIINYTTKEMLSKKKELVNSKEQQKVLESWTQYNPPSS 392
Query: 414 DPELTEENKST-------------------------LDEAISLAWSNDEFDMLLELVSLE 448
P +E + +D++I+ AW + D +++ L
Sbjct: 393 GPAKNKERNTIPIPIQKQHNEPVSEKVELEPWLIEEMDKSIADAWLSGGEDKFTQILHLI 452
Query: 449 GSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQ 507
S NV +YQH+ T +T LMV AG+G + V LL+LGA+ LK+ + TAL + Q
Sbjct: 453 HSENVSVDYQHSKTFVTSLMVAAGRGLLNTVEQLLNLGANLNLKSCNDWTALDWAKNMKQ 512
Query: 508 PEVAQIIKKHME---------------NALSDSMKQQLLDKYLATVNPELIDLVLIEQLL 552
E A++I+ +++ NA + LLD Y T N E +D L+ L+
Sbjct: 513 AECAELIEAYIKTYDCPTSEVELSRAKNAPISEEDKMLLDVYHHTFNDENVDYNLLLTLI 572
Query: 553 RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
I + G+ILVFLPG++DI R+++ +++ + LHS + + QK+VF+
Sbjct: 573 LHIHLQMPMGSILVFLPGYDDIVTMREKINGENRMNQGNRYNLYILHSNMQTSDQKRVFR 632
Query: 613 RPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQ 672
P G RKIILSTNIAET+ITIDDVVYVIDSG++KEKS+D + V L+S+W+S+A AKQ
Sbjct: 633 PSPQGTRKIILSTNIAETSITIDDVVYVIDSGKVKEKSFDAISGVCMLRSNWISQACAKQ 692
Query: 673 RAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQ 731
R GRAGRCQ GICY LYS +R S+ +Q PE+ R+P+++LCL K L P N I +FL+
Sbjct: 693 RKGRAGRCQKGICYRLYSSVRYNSMQLYQTPEMLRLPLQQLCLYTKHLAPGNTPIAEFLE 752
Query: 732 KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLD 791
K ++PP +V RNA+ +L+ I AL E +TELG L L + P + KML +A+++ CLD
Sbjct: 753 KAIEPPSNVITRNAVQLLKTIDALDPWEDLTELGSHLLDLPIEPRLGKMLLYAVVLKCLD 812
Query: 792 PALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR 851
P LT+ C+ Y+DPF +P P++K+ A A+ E AS SD ++V+ AF+ W+NA+
Sbjct: 813 PILTIVCSLAYKDPFVIPFQPSKKQAAMLARKEFAS--NTYSDHMSVLRAFQIWQNARAN 870
Query: 852 GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIHA 907
G E FC + F+S+ VM M++GMR QL +L +GF+ D+ + N+ ++ A
Sbjct: 871 GWERAFCEKNFISAAVMEMVVGMRTQLLGQLRASGFVKSRGSGDIRDLNSNSENWAVVKA 930
Query: 908 VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL--NFKLSFKKTDD-------- 957
L AGLYP + R+ H R T KV HP S +F S + T
Sbjct: 931 ALTAGLYPNLIRVDREHAQLR----TQKEVKVFFHPSSTLRDFSKSLRTTSAQVHAANVN 986
Query: 958 ---CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDD 1014
C M+Y+E++R H R T+V P+ + + + + E + + SD +
Sbjct: 987 SLPCDWMLYEEMSRSGRFCHARTVTLVNPITVAIFSGPARLPMDVIYEAECIPESESDSE 1046
Query: 1015 ADENESDEDCMEIDD 1029
DE+ +++DD
Sbjct: 1047 VDESHEGTTILKLDD 1061
>gi|426349664|ref|XP_004042411.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Gorilla gorilla gorilla]
Length = 1424
Score = 630 bits (1625), Expect = e-177, Method: Compositional matrix adjust.
Identities = 404/1175 (34%), Positives = 620/1175 (52%), Gaps = 149/1175 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS------LI 409
VK +LED+L +LK SA+ N S S L
Sbjct: 375 VKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKSESQRQRTVLN 434
Query: 410 VPNED-----------PELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
V +E +LTE++ + L D +S W + + D ++ L +
Sbjct: 435 VTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 494
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDG---RTALQLG---- 502
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G T L L
Sbjct: 495 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWXFXTTLILHISLY 554
Query: 503 ------EQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKIC 556
E N E + + + + D ++LL Y + + E +DL LI LL IC
Sbjct: 555 SYTASLEFGNLDESSLVQTNGSDLSAED---RELLKAYHHSFDDEKVDLDLIMHLLYNIC 611
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
+ GA+L+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV K P
Sbjct: 612 HSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNP 671
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
P G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA QR
Sbjct: 672 PAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRK 731
Query: 675 GRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKT 733
GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL K
Sbjct: 732 GRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKA 791
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
+PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CLDP
Sbjct: 792 PEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPI 851
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+ G
Sbjct: 852 LTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARSDGW 909
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVL 909
E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++ A L
Sbjct: 910 ERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAAL 969
Query: 910 MAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK-------------- 954
+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 970 VAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAIKAL 1024
Query: 955 -TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDDMSD 1012
TD ++YDE+TR ++R C+ V P+ +L+ +A E D + +
Sbjct: 1025 PTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRVDGIPN 1081
Query: 1013 DDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRE 1072
D +D E++DKT+ + +D WL+F + + LR+
Sbjct: 1082 DSSDS--------EMEDKTTANLA-----------ALKLDEWLHFKLEPEAASLLLQLRQ 1122
Query: 1073 RLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
+ L ++ P K V EA++ A+ ++LS +
Sbjct: 1123 KWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1157
>gi|340715187|ref|XP_003396100.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Bombus
terrestris]
Length = 1157
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 410/1177 (34%), Positives = 639/1177 (54%), Gaps = 148/1177 (12%)
Query: 14 QKQQQQQSPTVAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTS 72
++ + +++P + E TRI ++ L L + D+ F ++ + ERA +H++ ++G+ S
Sbjct: 3 RRNRSKKAPLIGEDTRIAVNLTLKKLLETHDQKELEFPSSYTAEERAYIHKLAHELGLKS 62
Query: 73 KSSGRGKQRRVSVCKSKKRVETDKGKEILPS---LTFSEGSKLVLQDLFTHYPPDDGEPG 129
KS G+G R ++V K + G I+ + + + S+ + +L +P + E
Sbjct: 63 KSRGKGTNRFLTVYKRE-------GSTIVQADAVIKLQKASRQSIYNLLQAFPLNHKECQ 115
Query: 130 EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLP 189
+ L ++ R D+ + + ++ + +I + ++ R LP
Sbjct: 116 DLLPP-----IERERPPNTDVSVN---TNTKAMGRLNNSVPQIPQLKTNFDVLNYRKALP 167
Query: 190 ISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISAT 249
I SF++ I +++NQVV+I GETG GKTTQVPQF+LEH + + C+I+CTQPRR+SA
Sbjct: 168 IFSFREDILDALNTNQVVIIGGETGSGKTTQVPQFILEHCQQRQQPCRIICTQPRRLSAV 227
Query: 250 SVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNK 309
SVAER++ ER E IG GY+IRLES+ + + +CTNGVLLR L++ G S L
Sbjct: 228 SVAERVAFERDEKIGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMA-GDSAL------ 280
Query: 310 PAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFG 369
S +TH+I+DE+HERDR+ DF+L ++D + + L+L+LMSATLD + F +YF
Sbjct: 281 ------STVTHVIMDEVHERDRFCDFLLIALKDAIQKHKSLKLVLMSATLDVNIFVKYFN 334
Query: 370 GCPVIQVPGFTYPVKSFYLEDVLSIL----------------KSAESNHLDSASLIVPNE 413
C V+ V G +Y V +++LEDVL + K + L++ + P +
Sbjct: 335 KCAVVNVLGRSYDVDTYFLEDVLKMTGYMTKEMLSERKEFMNKKDQHKMLETWTQYKPQQ 394
Query: 414 D-------------PELTEENKST-------------LDEAISLAWSNDEFDMLLELVSL 447
P L ++N+ +D++IS AW D +L+
Sbjct: 395 SGSNTMNERCILPAPILAQQNEPVPEKIKLEPWLAEEMDKSISEAWLCGGEDKFAQLLYF 454
Query: 448 EGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQEN 506
S NV +YQH+ T +TPLM+ AGKG + LL+LGA+ L+A + TAL + N
Sbjct: 455 ILSENVSVDYQHSATFVTPLMIAAGKGCINTTEQLLNLGANLNLRAANEWTALDWAKNMN 514
Query: 507 QPEVAQIIKKHMEN---ALSDSMKQQ------------LLDKYLATVNPELIDLVLIEQL 551
Q E A++I+ +M+ L D K LLD Y T N + I+ L+ QL
Sbjct: 515 QAECAELIEAYMKTYDCTLQDETKVHVKDVSLSEEDKFLLDVYQHTFNDDKINYDLLLQL 574
Query: 552 LRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK---FVIIPLHSMVPSVQQK 608
+ I + G++L+FLPG++DI R+++ N ++ +K + + LHS + + QK
Sbjct: 575 ILHIHLKMPPGSLLIFLPGYDDIVTMREKI--NNEEKEMNKGLRYNLYVLHSNMQTCDQK 632
Query: 609 KVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
KVFK P G RKIILSTNIAET+ITIDDVVYVIDSG++KEKS+D + V TL+S+W+S+A
Sbjct: 633 KVFKPSPAGSRKIILSTNIAETSITIDDVVYVIDSGKVKEKSFDALSGVCTLKSNWISQA 692
Query: 669 SAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIE 727
AKQR GRAGRC+ GICY L+S +R +++ +Q PEI R P++ELCL K L P N I
Sbjct: 693 CAKQRKGRAGRCRKGICYRLFSSVRYSNMEPYQTPEILRSPLQELCLYTKHLAPGNTPIA 752
Query: 728 DFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
+FL + L+PP +V RNA+ +L+ I AL E +TELG L L V P + KML +A+++
Sbjct: 753 EFLDRALEPPSNVITRNAVQLLKTIDALDPWEDLTELGSHLLDLPVEPRLGKMLLYAVVL 812
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
CLDP LT+ C+ Y+DPF LP+ P++K+ ATAA+ A+ SD +AV+ AF+ W+N
Sbjct: 813 KCLDPVLTIVCSLAYKDPFVLPLQPSQKRAATAARKRFAT--NTYSDHMAVLRAFQGWQN 870
Query: 848 AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPG 903
A+ G+E FC Q F+S+ VM M++GMR QL +L +GF+ P D+ + N+
Sbjct: 871 ARASGKERTFCEQNFISAAVMEMIVGMRTQLLGQLRASGFVRARGPGDIRDLNSNSENWA 930
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL------NFKLSFKKTDD 957
++ A L AGLYP + RL H R T KV HP S + +++ +T
Sbjct: 931 VVKAALTAGLYPNLIRLDREHLQLR----TQKEVKVFFHPSSTLRDCPKSPRMTSTQTYA 986
Query: 958 -------CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA--TEIAVAPAPDNEDDDEDD 1008
C ++Y+E++R HV+ T++ PL + L + ++V D
Sbjct: 987 ANVEALPCDWLLYEEMSRTGRFCHVKMVTLINPLTVALFCGPSRLSV-----------DV 1035
Query: 1009 DMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIY 1068
+ E+ESD E+D+ G +D W+ F
Sbjct: 1036 IYEAESVPESESDS---EVDESNEG-------------TIFKLDDWVVFKLDPETARFFL 1079
Query: 1069 CLRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
LR++ + L ++ P KA+ + E + + S+++
Sbjct: 1080 HLRQKWNALFLRRMKTPNKAMSQLDEKVVSTLVSVIT 1116
>gi|402872279|ref|XP_003900050.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Papio anubis]
Length = 1365
Score = 627 bits (1617), Expect = e-176, Method: Compositional matrix adjust.
Identities = 398/1158 (34%), Positives = 605/1158 (52%), Gaps = 149/1158 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I +S L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVSIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 375 VKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENTFKPESQRQRTVPN 434
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E L E++ + L D +S W + + D ++ L +
Sbjct: 435 VTDEYDLLDDGGDAVFSQLPEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 494
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 495 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 554
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 555 IVDLLESYSASLEFGNLDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 614
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F T ++ + LHS + + QKKV
Sbjct: 615 NICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVL 674
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 675 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 734
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 735 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 794
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 795 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 854
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 855 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARS 912
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 913 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 972
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 AALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAI 1027
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1028 KALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRVDG 1084
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++DKT+ + +D WL F + +
Sbjct: 1085 IPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLNFKLEPEAASLLLQ 1125
Query: 1070 LRERLSVAILFKVTHPQK 1087
LR++ L ++ P K
Sbjct: 1126 LRQKWHNLFLRRMRAPSK 1143
>gi|328780685|ref|XP_392558.3| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Apis
mellifera]
Length = 1155
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 416/1180 (35%), Positives = 635/1180 (53%), Gaps = 156/1180 (13%)
Query: 14 QKQQQQQSPTVAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTS 72
++ + +++P + E TRI ++ L L + D+ F ++ + ERA +H++ ++G+ S
Sbjct: 3 RRNRHKKTPLIGEDTRIAVNLTLKKLLETPDQKELEFPSSYTAEERAYIHKLAYELGLKS 62
Query: 73 KSSGRGKQRRVSVCKSKKRVETDKGKEILPS---LTFSEGSKLVLQDLFTHYPPDDGEPG 129
KS G+G R ++V K + G I+ + + + S+ + +L +P + E
Sbjct: 63 KSRGKGTNRFLTVYKRE-------GSTIVQADAVIKLQKSSRQSIYNLLQAFPLNHKECQ 115
Query: 130 EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAM-KVESLTSRIEKDANLRQIVEERSKL 188
+ L ++ R D+ K AM ++ + +I + ++ R L
Sbjct: 116 DLLPP-----IERERPPNTDVNTNTK------AMGRLNNSVPQIPQLKTNFDVLNYRKAL 164
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISA 248
PI +F++ I +++NQVV+I GETG GKTTQVPQF+LEH + + C+I+CTQPRR+SA
Sbjct: 165 PIFNFREDILDALNNNQVVIIGGETGSGKTTQVPQFILEHCQQRQQPCRIICTQPRRLSA 224
Query: 249 TSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
SVAER++ ER E IG GY+IRLES+ + + +CTNGVLLR L++ G S L
Sbjct: 225 VSVAERVAFERDEKIGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMA-GDSAL----- 278
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF 368
S +TH+IVDE+HERDR+ DF+L ++D L + L+L+LMSATLD + F +YF
Sbjct: 279 -------STVTHVIVDEVHERDRFCDFLLIALKDALQKHKSLKLVLMSATLDVNIFVKYF 331
Query: 369 GGCPVIQVPGFTYPVKSFYLEDVLSIL--------------------------------K 396
C VI V G +Y V +++LEDVL + +
Sbjct: 332 NKCAVINVLGRSYDVDTYFLEDVLKMTGYMTKEMLSKRKEFMNKKDQHKILETWTQYKPQ 391
Query: 397 SAESNHLDSASLI-----------VPNE---DPELTEENKSTLDEAISLAWSNDEFDMLL 442
+ SN ++ ++ VP + +P L EE +D++IS AW D
Sbjct: 392 QSGSNAMNERCILPAPILAQQNEPVPEKVKLEPWLAEE----MDKSISDAWLRGGEDNFA 447
Query: 443 ELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQL 501
+L+ S NV +YQH+ T +TPLMV AGKG + LL+LGA+ L+A + TAL
Sbjct: 448 QLLYFILSENVSVDYQHSTTLVTPLMVAAGKGCINTTEQLLNLGANLNLRAANEWTALDW 507
Query: 502 GEQENQPEVAQIIKKHMEN---ALSDSMKQQ------------LLDKYLATVNPELIDLV 546
+ NQ E A++I+ +M+ + D K LLD Y T N + I+
Sbjct: 508 AKNMNQTECAELIEAYMKTYDCTVQDETKAHAKDISLPEEDKFLLDVYQHTFNDDKINYD 567
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK---FVIIPLHSMVP 603
L+ L+ I + G++LVFLPG++DI R+++ N ++ +K + + LHS +
Sbjct: 568 LLLHLILHIHLKMPPGSLLVFLPGYDDIVTMREKI--NNEEKEMNKGLRYNLYVLHSNMQ 625
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+ QKKVFK P G RKIILSTNIAET+ITIDDVVYVIDSG++KEKS+D + V TL+S+
Sbjct: 626 TCDQKKVFKPSPVGTRKIILSTNIAETSITIDDVVYVIDSGKVKEKSFDALSGVCTLKSN 685
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP- 722
W+S+A AKQR GRAGRC+ GICY L+S +R S+ +Q PEI R P++ELCL K L
Sbjct: 686 WISQACAKQRKGRAGRCRKGICYRLFSSVRYNSMEPYQTPEILRSPLQELCLYTKHLAAG 745
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
N I +FL + L+PP +V RNA+ +L+ I AL E +TELG L L + P + KML
Sbjct: 746 NTPIAEFLDRALEPPSNVVTRNAVQLLKTIDALDPWEDLTELGSHLLDLPIEPRLGKMLL 805
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+A+++ CLDP LT+ C+ Y+DPF LP P++K+ ATAA+ A+ SD +AV+ AF
Sbjct: 806 YAVVLKCLDPVLTIVCSLAYKDPFVLPFQPSQKRAATAARKRFAT--NTYSDHMAVLRAF 863
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHN 898
+ W+NA+ G+E FC Q F+S+ VM M++GMR QL +L +GF+ P D+ + N
Sbjct: 864 QGWQNARAGGKERIFCEQNFISAAVMEMVVGMRTQLLGQLRASGFVRARGPGDIRDLNSN 923
Query: 899 ARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL--NFKLSFKKTD 956
+ ++ A L AGLYP + R+ H R T KV HP S ++ S + T
Sbjct: 924 SENWAVVKAALTAGLYPNLIRVDREHLQLR----TQKEVKVFFHPSSTLRDYPKSPRMTS 979
Query: 957 D-----------CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD 1005
C ++Y+E++R HV+ T+V PL + L ++
Sbjct: 980 TQTYAANVEALPCDWLLYEEMSRTGRFCHVKMVTLVNPLTVALFCGPARLSV-------- 1031
Query: 1006 EDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIA 1065
D + E+ESD E+D+ G +D W+ F
Sbjct: 1032 -DVIYEAESVPESESDS---EVDESNEG-------------TIFKLDDWVVFKLDPETAR 1074
Query: 1066 QIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
LR++ + L ++ P KA+ + E + + S+++
Sbjct: 1075 FFLHLRQKWNALFLRRMKTPNKAMSQLDEKVVSTLVSVIT 1114
>gi|351703291|gb|EHB06210.1| Putative ATP-dependent RNA helicase YTHDC2 [Heterocephalus glaber]
Length = 1433
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 401/1188 (33%), Positives = 621/1188 (52%), Gaps = 151/1188 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 45 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 104
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + + ++ L +P + E E L +
Sbjct: 105 TV----KKKDGSETAHAMMTCNLTHNTTHAVRSLIQRFPVTNKERTELLPKTE------- 153
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 154 RGNVFAVEAENREMSKT--SGRLSNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 211
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ G C+I CTQPRR++A +VAER++ ER E
Sbjct: 212 ENKVVLIVGETGSGKTTQIPQFLLDDCCKNGIPCRIFCTQPRRLAAIAVAERVAAERKER 271
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 272 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 318
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 319 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 378
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 379 VKEMFLEDILRSTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRTVPN 438
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E L+E++ + L D +S W + + D ++ L +
Sbjct: 439 VTEEYDLLDDGGDAVFSQLSEKDVNCLEPWLIKEMDTCLSDIWLHKDVDAFAQVFHLILT 498
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 499 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 558
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
V +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 559 VVDLLESYSASLEFGNLDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 618
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F ++ + LHS + + QKKV
Sbjct: 619 NICHSCDTGAVLIFLPGYDEIVGLRDRILFDDKRFADSAHRYQVFMLHSNMQTSDQKKVL 678
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASAK
Sbjct: 679 KTPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAK 738
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ G+C+ L+S++R ++ +FQ PE+ R+P++ELCL KLL P +C I DFL
Sbjct: 739 QRKGRAGRCRPGVCFRLFSRIRFQNMLEFQTPELLRMPLQELCLHTKLLAPISCTIADFL 798
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
+ +PP ++ +RNA+ +L+ + A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 799 MRAPEPPPALIVRNAVQMLK-VDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 857
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 858 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 915
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 916 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 975
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAG--GAKVRLHPHSLNFKLSFKK---------- 954
A L+AG+YP + + R V G KVR HP S+ + +KK
Sbjct: 976 AALVAGMYPNLVHV------DRENVALTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAA 1029
Query: 955 -----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ P + +
Sbjct: 1030 IQALPTD---WLIYDEMTRAYRIANIRCCSAVTPVTVLVFC-------GPARLPSNALQE 1079
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
S AD +D E++D+T+ V + +D WL F + +
Sbjct: 1080 PSSFRADGIPNDSSDSEMEDRTTAN-----------LVALKLDEWLNFKLEPEAASLLLQ 1128
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1129 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1176
>gi|392344596|ref|XP_003749024.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Rattus norvegicus]
Length = 1430
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 392/1173 (33%), Positives = 607/1173 (51%), Gaps = 143/1173 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 45 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 104
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 105 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 153
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + ++ + R LP+ ++ I +
Sbjct: 154 RGNVFAVEAENREMSKT--SGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 211
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 212 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 271
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 272 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 318
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 319 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 378
Query: 383 VKSFYLEDVLSIL-----------KSAESNHLDSASLI--------------VPNEDPEL 417
VK +LED+L K + SA LI P + ++
Sbjct: 379 VKEMFLEDILRTTGYTNKEMLKYKKEKQRAWQQSAPLIHITRASSPALFMGRAPQQQTDI 438
Query: 418 TEENK-----------------------STLDEAISLAWSNDEFDMLLELVSLEGSPNV- 453
+ N +D +S W + + D ++ L + NV
Sbjct: 439 KQLNNLXSLLFCFXKTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILTENVS 498
Query: 454 YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQI 513
+Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E+ +
Sbjct: 499 VDYRHSETSATALMVAAGRGFTSQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDL 558
Query: 514 IKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLRKICM 557
++ + N S+ Q +LL Y + + E +DL LI LL IC
Sbjct: 559 LESYSASLEFGNLDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICH 618
Query: 558 DSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
+ GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV K PP
Sbjct: 619 SCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPP 678
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAG 675
G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA QR G
Sbjct: 679 AGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKG 738
Query: 676 RAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTL 734
RAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL K
Sbjct: 739 RAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAP 798
Query: 735 DPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL 794
+PP ++ +RNA+ +L+ I A+ E +TELG L L V + KM+ A++ P L
Sbjct: 799 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEXHLGKMVLCAVVXSVWTPIL 858
Query: 795 TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQE 854
T+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+ G E
Sbjct: 859 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARSDGWE 916
Query: 855 AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLM 910
FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++ A L+
Sbjct: 917 RAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALV 976
Query: 911 AGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK--------------- 954
AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 977 AGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALP 1031
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDD 1014
TD ++YDE+TR ++R C+ V P+ +L+ P + + S
Sbjct: 1032 TD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFC-------GPARLTSNALQEPSSFR 1081
Query: 1015 ADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERL 1074
AD +D E++D+T+ + +D WL F + + LR++
Sbjct: 1082 ADGIPNDSSDSEMEDRTTANLA-----------ALKLDEWLNFKLEPEAASLLLQLRQKW 1130
Query: 1075 SVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
L ++ P K V EA++ A+ ++LS +
Sbjct: 1131 HSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1163
>gi|321465352|gb|EFX76354.1| hypothetical protein DAPPUDRAFT_306238 [Daphnia pulex]
Length = 1426
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 404/1076 (37%), Positives = 590/1076 (54%), Gaps = 119/1076 (11%)
Query: 22 PTVAEATRIRISQILDGFLASKD-EVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQ 80
P + E+ + + +L F ++ E YTFDA+LS +RA +H + MGM SKS G+G +
Sbjct: 15 PNIYESMKKGLDILLKAFRDDEEAEEYTFDASLSTEQRAYIHASAQSMGMKSKSQGKGSE 74
Query: 81 RRVSVCKSKKRVETDKGK-EILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDAN---- 135
RR++V K+ V+ K ILP T +KL+ + T+ D P +K AN
Sbjct: 75 RRLTVTKTVVHVKNKVSKLNILPH-TVERATKLLQEFPLTNEELQDVHPLQKQVANIATG 133
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKD 195
Q +D + + I +P S A IA +R LP S ++
Sbjct: 134 QQSHADCIK-YHMPIIPQPAKSSALIA---------------------DRKSLPTWSHRE 171
Query: 196 VITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERI 255
I + + N+VV+I+G+TG GKTTQVPQ+LLE + E +I+CTQPRRI+A SVAER+
Sbjct: 172 EILNMIAQNKVVMITGDTGSGKTTQVPQYLLELFSERNEPVRIICTQPRRIAAISVAERV 231
Query: 256 SVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDV 315
+ ERGE +G +GY+IRLE++ ++++FCT G+LLR L+ Q + ++
Sbjct: 232 ANERGEQLGGTVGYQIRLENRMSSKTALMFCTTGILLRTLMYQ-------------EGNL 278
Query: 316 SALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQ 375
+TH+I+DE+HERDR+ DF+L +++ LP P LRLILMSA LD FS YFG CPV+
Sbjct: 279 ERVTHLIIDEVHERDRFVDFLLGVLKSRLPRLPKLRLILMSAALDISVFSNYFGSCPVMH 338
Query: 376 VPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI---VPNEDPELT-------------- 418
V G +PV ++LEDVL + ++HL +++ + V + D + T
Sbjct: 339 VQGKCFPVAEYFLEDVLEL-----TDHLGNSTPLEIGVWDGDDKNTKNGAVGFSRNGGQA 393
Query: 419 ------EENK-STLDEAISL---AWSNDEF-----DMLLELV-SLEGSPNVYNYQHTLTG 462
E+NK S LD L +W + F D L L ++ S NY+H+ T
Sbjct: 394 ARMSKLEKNKPSVLDSGAKLTFDSWIQEVFVLDNSDALCRLADAVMRSHMPINYKHSQTQ 453
Query: 463 LTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENAL 522
+TPLMV+A +GR+ V L LGAD L A TA L VA ++ +
Sbjct: 454 ITPLMVVAARGRIDLVNSFLQLGADPALTAGQW-TAANLARSMQHHSVASALEVYQSGK- 511
Query: 523 SDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
+ LL Y + E++++ L+ LL I + +GA+LVFLPG+++I RDR++
Sbjct: 512 ----AESLLQNYKFRYDEEIVNVDLVLDLLHVIEQQNSEGAVLVFLPGYDEIMNIRDRIM 567
Query: 583 AN-PFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
N F + KF + LHS + S Q++VF RPP G RKI+LSTN+AET+ITIDD+V+VI
Sbjct: 568 YNDSRFAGSGKFEVYTLHSSMQSGDQRRVFFRPPSGKRKIVLSTNLAETSITIDDIVFVI 627
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ 701
D+G++K KS+D VS L++ WV +ASA QR GRAGRC+ GICYHL+S+ R S +Q
Sbjct: 628 DTGKVKVKSFDALTGVSALKAEWVPQASAIQRKGRAGRCREGICYHLFSRERYESFEKYQ 687
Query: 702 VPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIV----------LQ 750
+PEI R+P+EELCLQ K L P + +IE F+ + + P I+ A+ + LQ
Sbjct: 688 IPEIFRVPLEELCLQSKNLAPIDLSIEQFIGQVPEAPNPHVIQRAVKIARSTLNSWQMLQ 747
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPI 810
+ AL E VT+LG L L V P KML A ++ CLDP LT+ C +RDPF LP
Sbjct: 748 WMDALDPWENVTDLGRLLLELPVEPRAGKMLLTATVLHCLDPVLTIVCCLSHRDPFLLPA 807
Query: 811 SPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNM 870
PNEKK A A K ELA+ G SD +A++ AF W A+ G+E FC ++F+SS VM++
Sbjct: 808 EPNEKKIAAARKLELAA--GTLSDHMAMLRAFNLWLAARANGKEREFCHRHFLSSAVMDV 865
Query: 871 LLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVA-RLRPPHKNGRR 929
+ +R Q+ +L K+GF+ + NA I A +++GLYP VA R R RR
Sbjct: 866 IHQLRIQILDQLRKSGFV-RSFQELNTNASSWVAIKACILSGLYPQVARRCRSGKLTTRR 924
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGD--GGM--HVRNCTVVGPLP 985
++ P S NF+++ T Y +GD GG+ +R T+V +
Sbjct: 925 EASVKMATHLKERP-SPNFRVNGWFTRK-----YQGKFQGDTYGGLVASLRCVTLVNTVA 978
Query: 986 LLL------LATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQH 1035
L + L+ E P +E +D DD+ D+ + SDE +I++ G H
Sbjct: 979 LAIFGGHCRLSNESIKDPVFSSESEDYDDNYEDESTTDESSDE-SDDIEELNEGLH 1033
>gi|380016698|ref|XP_003692312.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Apis
florea]
Length = 1141
Score = 620 bits (1599), Expect = e-174, Method: Compositional matrix adjust.
Identities = 409/1176 (34%), Positives = 626/1176 (53%), Gaps = 162/1176 (13%)
Query: 14 QKQQQQQSPTVAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTS 72
++ + +++P + E TRI ++ L L + D+ F ++ + ERA +H++ ++G+ S
Sbjct: 3 RRNRHKKTPLIGEDTRIAVNLTLKKLLETPDQKELEFPSSYTAEERAYIHKLAYELGLKS 62
Query: 73 KSSGRGKQRRVSVCKSKKRVETDKGKEILPS---LTFSEGSKLVLQDLFTHYPPDDGEPG 129
KS G+G R ++V K + G I+ + + + S+ + +L +P + E
Sbjct: 63 KSRGKGTNRFLTVYKRE-------GSTIVQADAVIKLQKSSRQSIYNLLQAFPLNHKECQ 115
Query: 130 EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLP 189
+ L ++ R D+ + + ++ + +I + ++ R LP
Sbjct: 116 DLLPP-----IERERPPNTDVSVN---TNTKAMGRLNNSVPQIPQLKTNFDVLNYRKALP 167
Query: 190 ISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISAT 249
I +F++ I +++NQVV+I GETG GKTTQVPQF+LEH + + C+I+CTQPRR+SA
Sbjct: 168 IFNFREDILDALNNNQVVIIGGETGSGKTTQVPQFILEHCQQRQQPCRIICTQPRRLSAV 227
Query: 250 SVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNK 309
SVAER++ ER E IG GY+IRLES+ + + +CTNGVLLR L++ G S L
Sbjct: 228 SVAERVAFERDEKIGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMA-GDSAL------ 280
Query: 310 PAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFG 369
S +TH+IVDE+HERDR+ DF+L ++D L + L+L+LMSATLD + F +YF
Sbjct: 281 ------STVTHVIVDEVHERDRFCDFLLIALKDALQKHKSLKLVLMSATLDVNIFVKYFN 334
Query: 370 GCPVIQVPGFTYPVKSFYLEDVLSIL--------------------------------KS 397
C VI V G +Y V +++LED+L + +
Sbjct: 335 KCAVINVLGRSYDVDTYFLEDILKMTGYMTKEMLSKRKEFMNKKDQHQILETWTQYKPQQ 394
Query: 398 AESNHLDSASLI-----------VPNE---DPELTEENKSTLDEAISLAWSNDEFDMLLE 443
+ SN ++ ++ VP + +P L EE +D++IS AW D +
Sbjct: 395 SGSNAMNERCILPAPILAQQNEPVPEKVKLEPWLAEE----MDKSISDAWLRGGEDNFAQ 450
Query: 444 LVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLG 502
L+ S NV +YQH+ T +TPLMV AGKG + LL+LGA+ L+A + TAL
Sbjct: 451 LLYFILSENVSVDYQHSTTLVTPLMVAAGKGCINTTEQLLNLGANLNLRAANEWTALDWA 510
Query: 503 EQENQPEVAQIIKKHMEN---ALSDSMKQQ------------LLDKYLATVNPELIDLVL 547
+ NQ E A++I+ +M+ + D K LLD Y T N + I+ L
Sbjct: 511 KNMNQTECAELIEAYMKTYDCTVQDETKTHAKDISLPEEDKFLLDVYQHTFNDDKINYDL 570
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQ 607
+ L+ I + G++LVFLPG++DI ++ + LHS + + Q
Sbjct: 571 LLHLILHIHLKMPPGSLLVFLPGYDDIG---------------LRYNLYVLHSNMQTCDQ 615
Query: 608 KKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSK 667
KKVFK P G RKIILSTNIAET+ITIDDVVYVIDSG++KEKS+D + V TL+S+W+S+
Sbjct: 616 KKVFKPSPVGTRKIILSTNIAETSITIDDVVYVIDSGKVKEKSFDALSGVCTLKSNWISQ 675
Query: 668 ASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNI 726
A AKQR GRAGRC+ GICY L+S +R S+ +Q PEI R P++ELCL K L N I
Sbjct: 676 ACAKQRKGRAGRCRKGICYRLFSSVRYNSMEPYQTPEILRSPLQELCLYTKHLAAGNTPI 735
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
+FL + L+PP +V RNA+ +L+ I AL E +TELG L L + P + KML +A++
Sbjct: 736 AEFLDRALEPPSNVVTRNAVQLLKTIDALDPWEDLTELGSHLLDLPIEPRLGKMLLYAVV 795
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
+ CLDP LT+ C+ Y+DPF LP P++K+ ATAA+ A+ SD +AV+ AF+ W+
Sbjct: 796 LKCLDPVLTIVCSLAYKDPFVLPFQPSQKRAATAARKRFAT--NTYSDHMAVLRAFQGWQ 853
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVP 902
NA+ G+E FC Q F+S+ VM M++GMR QL +L +GF+ P D+ + N+
Sbjct: 854 NARAGGKERIFCEQNFISAAVMEMVVGMRTQLLGQLRASGFVRARGPGDIRDLNSNSENW 913
Query: 903 GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL--NFKLSFKKTDD--- 957
++ A L AGLYP + R+ H R T KV HP S ++ S + T
Sbjct: 914 AVVKAALTAGLYPNLIRVDREHLQLR----TQKEVKVFFHPSSTLRDYPKSPRMTSTQTY 969
Query: 958 --------CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDD 1009
C ++Y+E++R HV+ T+V PL + L ++ D
Sbjct: 970 AANVEALPCDWLLYEEMSRTGRFCHVKMVTLVNPLTVALFCGPARLSV---------DVI 1020
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ E+ESD E+D+ G +D W+ F
Sbjct: 1021 YEAESVPESESDS---EVDESNEG-------------TIFKLDDWVVFKLDPETARFFLH 1064
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
LR++ + L ++ P KA+ + E + + S+++
Sbjct: 1065 LRQKWNALFLRRMKTPNKAMSQLDEKVVSTLVSVIT 1100
>gi|47077415|dbj|BAD18595.1| unnamed protein product [Homo sapiens]
Length = 1340
Score = 613 bits (1582), Expect = e-172, Method: Compositional matrix adjust.
Identities = 372/1016 (36%), Positives = 552/1016 (54%), Gaps = 135/1016 (13%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ ++ I + N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPR
Sbjct: 100 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 159
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A +VAER++ ER E IG IGY+IRLES+ + + FCTNGVLLR L++
Sbjct: 160 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA------- 212
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
+S +TH+IVDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F
Sbjct: 213 ------GDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLF 266
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVL--------SILK-------------------S 397
+YFG CPVI + G + VK +LED+L +LK S
Sbjct: 267 IRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYS 326
Query: 398 AESNHLDSAS------LIVPNED-----------PELTEENKSTL--------DEAISLA 432
A+ N S L V +E +LTE++ + L D +S
Sbjct: 327 AQENSFKPESQRQRTVLNVTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDI 386
Query: 433 WSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLK 491
W + + D ++ L + NV +Y+H+ T T LMV AG+G V L+S+GA+ K
Sbjct: 387 WLHKDIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSK 446
Query: 492 AKDGRTALQLGEQENQPEVAQIIKKH-----MENALSDSMKQ-----------QLLDKYL 535
A +G AL + Q E+ +++ + N S+ Q +LL Y
Sbjct: 447 ASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYH 506
Query: 536 ATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKF 593
+ + E +DL LI LL IC + GA+L+FLPG+++I RDR+L + F +T ++
Sbjct: 507 HSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHRY 566
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+ LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D
Sbjct: 567 QVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDA 626
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++EL
Sbjct: 627 LNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL 686
Query: 714 CLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLS 772
CL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TELG L L
Sbjct: 687 CLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLP 746
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A + + G
Sbjct: 747 VEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAF 804
Query: 833 SDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE-- 890
SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR QL +L +GF+
Sbjct: 805 SDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARG 864
Query: 891 --DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLN 947
D+ + N+ ++ A L+AG+YP + H + V T KVR HP S+
Sbjct: 865 GGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVL 919
Query: 948 FKLSFKK---------------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
+ +KK TD ++YDE+TR ++R C+ V P+ +L+
Sbjct: 920 SQPQYKKIPPANGQAAAIKALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGP 976
Query: 993 IAVAPAPDNEDDD-EDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVV 1051
+A E D + +D +D E++DKT+ + +
Sbjct: 977 ARLASNALQEPSSFRVDGIPNDSSDS--------EMEDKTTANLA-----------ALKL 1017
Query: 1052 DRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
D WL+F + + LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1018 DEWLHFTLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1073
>gi|380798777|gb|AFE71264.1| putative ATP-dependent RNA helicase YTHDC2, partial [Macaca mulatta]
Length = 1303
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 373/1016 (36%), Positives = 549/1016 (54%), Gaps = 135/1016 (13%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ ++ I + N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPR
Sbjct: 63 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 122
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A +VAER++ ER E IG IGY+IRLES+ + + FCTNGVLLR L++
Sbjct: 123 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA------- 175
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
+S +TH+IVDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F
Sbjct: 176 ------GDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLF 229
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVL--------SILK-------------------S 397
+YFG CPVI + G + VK +LED+L +LK S
Sbjct: 230 LRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYS 289
Query: 398 AESNHLDSAS---LIVPNEDPE--------------LTEENKSTL--------DEAISLA 432
A+ N S VPN E LTE++ + L D +S
Sbjct: 290 AQENTFKPESQRQRTVPNVTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDI 349
Query: 433 WSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLK 491
W + + D ++ L + NV +Y+H+ T T LMV AG+G V L+S+GA+ K
Sbjct: 350 WLHKDIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSK 409
Query: 492 AKDGRTALQLGEQENQPEVAQIIKKH-----MENALSDSMKQ-----------QLLDKYL 535
A +G AL + Q E+ +++ + N S+ Q +LL Y
Sbjct: 410 ASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYH 469
Query: 536 ATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKF 593
+ + E +DL LI LL IC + GA+L+FLPG+++I RDR+L + F T ++
Sbjct: 470 HSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRY 529
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+ LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D
Sbjct: 530 QVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDA 589
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++EL
Sbjct: 590 LNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL 649
Query: 714 CLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLS 772
CL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TELG L L
Sbjct: 650 CLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLP 709
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A + + G
Sbjct: 710 VEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAF 767
Query: 833 SDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE-- 890
SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR QL +L +GF+
Sbjct: 768 SDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARG 827
Query: 891 --DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLN 947
D+ + N+ ++ A L+AG+YP + H + V T KVR HP S+
Sbjct: 828 GGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVL 882
Query: 948 FKLSFKK---------------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
+ +KK TD ++YDE+TR ++R C+ V P+ +L+
Sbjct: 883 SQPQYKKIPPANGQAAAIKALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGP 939
Query: 993 IAVAPAPDNEDDD-EDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVV 1051
+A E D + +D +D E++DKT+ + +
Sbjct: 940 ARLASNALQEPSSFRVDGIPNDSSDS--------EMEDKTTANLA-----------ALKL 980
Query: 1052 DRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
D WL F + + LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 981 DEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1036
>gi|344254992|gb|EGW11096.1| putative ATP-dependent RNA helicase YTHDC2 [Cricetulus griseus]
Length = 1268
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 371/1016 (36%), Positives = 551/1016 (54%), Gaps = 135/1016 (13%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ ++ I + N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPR
Sbjct: 28 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 87
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A +VAER++ ER E IG IGY+IRLES+ + + FCTNGVLLR L++
Sbjct: 88 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA------- 140
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
+S +TH+IVDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F
Sbjct: 141 ------GDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLF 194
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVL--------SILK-------------------S 397
+YFG CPVI + G + VK +LED+L +LK S
Sbjct: 195 IRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYS 254
Query: 398 AESNHLDSAS--------------LIVPNEDP---ELTEENKSTL--------DEAISLA 432
A+ N S L+ D +LTE++ + L D +S
Sbjct: 255 AQENTFKPESQRQRAVASVSEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDI 314
Query: 433 WSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLK 491
W + + D ++ L + NV +Y+H+ T T LMV AG+G V L+S+GA+ K
Sbjct: 315 WLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFTSQVEQLISMGANVHSK 374
Query: 492 AKDGRTALQLGEQENQPEVAQIIKKH-----MENALSDSMKQ-----------QLLDKYL 535
A +G AL + Q E+ +++ + N S+ Q +LL Y
Sbjct: 375 ASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGNDLSAEDRELLKAYH 434
Query: 536 ATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKF 593
+ + E +DL LI LL IC + GAIL+FLPG+++I RDR+L + F +T ++
Sbjct: 435 HSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRY 494
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+ LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D
Sbjct: 495 QVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDA 554
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++EL
Sbjct: 555 LNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL 614
Query: 714 CLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLS 772
CL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TELG L L
Sbjct: 615 CLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLP 674
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A + + G
Sbjct: 675 VEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTF 732
Query: 833 SDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE-- 890
SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR QL +L +GF+
Sbjct: 733 SDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARG 792
Query: 891 --DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLN 947
D+ + N+ ++ A L+AG+YP + H + V T KVR HP S+
Sbjct: 793 GGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVL 847
Query: 948 FKLSFKK---------------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
+ +KK TD ++YDE+TRG ++R C+ V P+ +++
Sbjct: 848 SQPQYKKIPPANGQAAAIQALPTD---WLIYDEMTRGHVIANIRCCSAVTPVTVVVFCGP 904
Query: 993 IAVAPAPDNEDDD-EDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVV 1051
+A E D + +D +D E++D+T+ + +
Sbjct: 905 ARLASNALQEPSSFRADGIPNDSSDS--------EMEDRTTANLA-----------ALKL 945
Query: 1052 DRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
D WL F + + LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 946 DEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1001
>gi|359320707|ref|XP_531871.3| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Canis lupus
familiaris]
Length = 1374
Score = 607 bits (1566), Expect = e-170, Method: Compositional matrix adjust.
Identities = 356/969 (36%), Positives = 536/969 (55%), Gaps = 105/969 (10%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 40 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 99
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 100 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 148
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 149 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 206
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 207 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 266
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 267 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 313
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 314 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 373
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 374 VKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQSTLTEWYSAQENTFKPESQRQRTVPN 433
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 434 VTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 493
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 494 ENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 553
Query: 510 VAQIIKK----------------HMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ H + + ++LL Y + + E +DL LI LL
Sbjct: 554 IVDLLESYSASLEFGNLDESSLVHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 613
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 614 NICHGCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 673
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 674 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAV 733
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 734 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 793
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 794 MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 853
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 854 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 911
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 912 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 971
Query: 907 AVLMAGLYP 915
A L+AG+YP
Sbjct: 972 AALVAGMYP 980
>gi|297294858|ref|XP_002804526.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Macaca
mulatta]
Length = 1443
Score = 603 bits (1556), Expect = e-169, Method: Compositional matrix adjust.
Identities = 391/1187 (32%), Positives = 606/1187 (51%), Gaps = 154/1187 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L K+++
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLP-----KTERG 151
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDS 203
V+ +++ + ++ + +I + R LP+ ++ I +
Sbjct: 152 NVFAVEAALVRDWTESSTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKE 211
Query: 204 NQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENI 263
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E I
Sbjct: 212 NKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERI 271
Query: 264 GDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIV 323
G IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+IV
Sbjct: 272 GQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVIV 318
Query: 324 DEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPV 383
DE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G + V
Sbjct: 319 DEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFLRYFGSCPVIYIQGRPFEV 378
Query: 384 KSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPNE 413
K +LED+L +LK SA+ N S VPN
Sbjct: 379 KEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENTFKPESQRQRTVPNV 438
Query: 414 DPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGSP 451
E LTE++ + L D +S W + + D ++ L +
Sbjct: 439 TDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILTE 498
Query: 452 NV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEV 510
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E+
Sbjct: 499 NVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTEI 558
Query: 511 AQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLRK 554
+++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 559 VDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYN 618
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFK 612
IC + GA+L+FLPG+++I RDR+L + F T ++ + LHS + + QKKV K
Sbjct: 619 ICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLK 678
Query: 613 RPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ----------S 662
PP G RKIILSTNIAET+IT++DVV+VIDSG++KE N VS+ S
Sbjct: 679 NPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEVCMGKANFVSSSTGGKVEVFKNIS 738
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W + RAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P
Sbjct: 739 LWDKVIDGYSYSARAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAP 798
Query: 723 -NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+
Sbjct: 799 VNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMV 858
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A+++ CLDP LT+AC YRDPF LP ++K+ A + + G SD +A++ A
Sbjct: 859 LCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRA 916
Query: 842 FECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSH 897
F+ W+ A+ G E FC + F+S M +++GMR QL +L +GF+ D+ +
Sbjct: 917 FQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNT 976
Query: 898 NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK-- 954
N+ ++ A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 977 NSENWAVVKAALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIP 1031
Query: 955 -------------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDN 1001
TD ++YDE+TR ++R C+ V P+ +L+ +A
Sbjct: 1032 PANGQAAAIKALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQ 1088
Query: 1002 EDDD-EDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGST 1060
E D + +D +D E++DKT+ + +D WL F
Sbjct: 1089 EPSSFRVDGIPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLNFKLE 1129
Query: 1061 ALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
+ + LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1130 PEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1176
>gi|355691523|gb|EHH26708.1| hypothetical protein EGK_16756 [Macaca mulatta]
gi|355750107|gb|EHH54445.1| hypothetical protein EGM_15291 [Macaca fascicularis]
Length = 1432
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 393/1180 (33%), Positives = 609/1180 (51%), Gaps = 151/1180 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFLRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS---LIVPN 412
VK +LED+L +LK SA+ N S VPN
Sbjct: 375 VKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENTFKPESQRQRTVPN 434
Query: 413 EDPE--------------LTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
E LTE++ + L D +S W + + D ++ L +
Sbjct: 435 VTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 494
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 495 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 554
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 555 IVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 614
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F T ++ + LHS + + QKKV
Sbjct: 615 NICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVL 674
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV-STLQSSWVSKASA 670
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KE + + L+++W S
Sbjct: 675 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEVCMVIFLLILPLLKTAWTSMCFY 734
Query: 671 KQRAGR-AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIED 728
KQ + AGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I D
Sbjct: 735 KQNLRKMAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIAD 794
Query: 729 FLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMD 788
FL K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++
Sbjct: 795 FLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLK 854
Query: 789 CLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA 848
CLDP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A
Sbjct: 855 CLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKA 912
Query: 849 KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGI 904
+ G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ +
Sbjct: 913 RSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAV 972
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK--------- 954
+ A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 VKAALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAA 1027
Query: 955 ------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-ED 1007
TD ++YDE+TR ++R C+ V P+ +L+ +A E
Sbjct: 1028 AIKALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRV 1084
Query: 1008 DDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQI 1067
D + +D +D E++DKT+ + +D WL F + +
Sbjct: 1085 DGIPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLNFKLEPEAASLL 1125
Query: 1068 YCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1126 LQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1165
>gi|170033973|ref|XP_001844850.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
gi|167875095|gb|EDS38478.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
Length = 1313
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 384/1149 (33%), Positives = 603/1149 (52%), Gaps = 165/1149 (14%)
Query: 24 VAEATRIRISQILDGFLA-SKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRR 82
+ E RI I ++D F+ K + F + + RA +H+ K + S+S G+G QR
Sbjct: 15 IEEDVRIAIHYMIDKFVQDEKLNEFDFPVSFTREHRAYIHDYVKNKSLKSRSHGKGNQRY 74
Query: 83 VSVCKSK--KRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRK- 139
+++ KS + D SL S+ S+ +Q + G E D+ +RK
Sbjct: 75 LTIYKSNILSLIHDD------ASLELSDTSQKYIQQVLN---KQGGFQKEIADSYANRKL 125
Query: 140 ------------SDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
S GK C P + A +A +++ER +
Sbjct: 126 FPSLTAYTLNLGSPNNCGK-----CVPPPTNASMA------------------VLQERHR 162
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPIS ++D I + ++ NQV +ISG TG GKTTQ+PQ++LE +GE C+I+CTQPRR+S
Sbjct: 163 LPISPYRDTIMNCLNQNQVTIISGSTGSGKTTQIPQYILESSTLRGEPCQIICTQPRRLS 222
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
A +VA+R+S ER E++G +GY+IRLES+ ++++FCTNGVLLR L+
Sbjct: 223 AITVADRVSYERNESLGQTVGYQIRLESRLSPLTNLIFCTNGVLLRCLMG---------- 272
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQY 367
K A ++ LTHIIVDE+HERD+YSDF+L +R+ + + +++ILMSAT++++ FS+Y
Sbjct: 273 -KNANSILNDLTHIIVDEVHERDQYSDFLLISLREKVLQHTKIKIILMSATIESNTFSRY 331
Query: 368 FGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLD------------------SASLI 409
F P+I++PG +P++SF+LED+L + S S D L
Sbjct: 332 FNNAPLIEIPGRLFPIESFFLEDILYRVDSYNSKINDVRRQYKGTPDFARALGGQQQLLR 391
Query: 410 VPNE---DPELTEENKSTLDEAISLAW---SNDEFDMLLELVSLEGSPNVYNYQHTLTGL 463
+P++ + +E +++ + L W S D+F+ LV E +P N+QHT T +
Sbjct: 392 LPSDVASTANMDDETILLMNDILELCWIENSPDDFNHFFYLVEDENNP--INFQHTETKM 449
Query: 464 TPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTAL-------------QLGEQENQPEV 510
T LM+ A KG V V LL +GAD +K K TAL QL E +Q
Sbjct: 450 TALMIAAAKGYVNVVKRLLDMGADPSVKGKHNFTALDWSVSINGYNGCSQLLEMASQQSQ 509
Query: 511 AQIIKKHMENALSDSMKQQ------------LLDKYLATVNPELIDLVLIEQLLRKICMD 558
A + S + QQ LLD Y +T N + ID LI ++ IC
Sbjct: 510 ALAAASSSSCSSSALLAQQQMQSPPKHLAKILLDVYQSTTNDDKIDHRLIFDVISYICAQ 569
Query: 559 SEDGAILVFLPGWEDINKTRD-----RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
G ILVFLPG++DI + + R LAN FR I LHS + + Q VFK
Sbjct: 570 LGPGGILVFLPGYDDILEQYELLSGSRSLANGSFR------IYMLHSNMQTNDQNAVFKS 623
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
P G RKIILSTNIAET+ITIDDVV+VIDSG++K+K YD + ++L ++W+S+A A QR
Sbjct: 624 VPHGTRKIILSTNIAETSITIDDVVFVIDSGKVKQKHYDSVTSTTSLTATWISQACATQR 683
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
+GRAGR + G+C+ L+S+ R ++ F +PEI R+P+ E+CLQ ++ + +I +FL K
Sbjct: 684 SGRAGRTKPGMCFRLFSRQRFEAMDKFTLPEILRVPLTEICLQTSIIASHTSILNFLSKA 743
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
+ PP +++I+ +I +LQ +GAL DE +TELG L L V + K+L + I + CLDP
Sbjct: 744 IQPPSTMSIKQSIKLLQKLGALDDDENLTELGLILADLPVDARLGKILLYGIFLKCLDPV 803
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LT+ A DPF LP + +K RA+ +K ++A SD L ++ AF+ W + + +
Sbjct: 804 LTIVSALSVNDPFVLPTNAADKDRASKSKRDMAE--DSYSDCLCLLRAFQKWNDVRPSTK 861
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVL 909
E FC+++F++SG M+ + +R ++ L G + ++ + + ++ A L
Sbjct: 862 ERQFCNRFFLNSGTMDTIGSLRTKILGHLRSIGLVKSYGAGNIQDLNQYSDSWAVVKACL 921
Query: 910 MAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL------MVY 963
+AGLYP V R+ + ++T K+ HP S+ S KK + L +V+
Sbjct: 922 VAGLYPNVCRVDKENAT----IKTRIDKKISPHPSSVIRDKSLKKNKESILSLPSEWIVF 977
Query: 964 DEITRGDGGMH--VRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESD 1021
+E TR G+H ++ TVV P + + + + ++E+ + + DE SD
Sbjct: 978 EEKTR--AGIHCLIKCNTVVTPATVAMFCGPLFL--------NEEESLIPWKELDECNSD 1027
Query: 1022 EDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFK 1081
D ++ DK+ ++VD W+ F + ++ R +LS L
Sbjct: 1028 NDEHDMSDKSK----------------LIVDDWINFAVDSDFGTSVFHFRHKLSALFLKF 1071
Query: 1082 VTHPQKALP 1090
+++P+ P
Sbjct: 1072 ISNPRSYQP 1080
>gi|242017002|ref|XP_002428983.1| ATP-dependent RNA helicase, putative [Pediculus humanus corporis]
gi|212513816|gb|EEB16245.1| ATP-dependent RNA helicase, putative [Pediculus humanus corporis]
Length = 1364
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 387/1185 (32%), Positives = 609/1185 (51%), Gaps = 166/1185 (14%)
Query: 14 QKQQQQQSPTVAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSK 73
+K+ V+E RI + L F +S+ F ++L+ ERA +H + K+G+ K
Sbjct: 3 KKKNNNNVGLVSEHVRIAVDVALRNFSSSEQTEIEFPSSLAAYERAYIHGLAAKLGLRKK 62
Query: 74 SSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLD 133
++ R ++V K EGS +V D G ++
Sbjct: 63 TN-----RVLTVYKR-------------------EGSTIVQADAKFQL----NRVGRQMI 94
Query: 134 ANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEK-DANLRQIVEE-------- 184
N K + +R D+ P+ + I + L + + A + Q+
Sbjct: 95 YNLLTKFPLSSRERQDLL--PQTERDRINHDLRELNKPLGRLPAGMIQVPPAPGSNPILQ 152
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQ 242
R LPI S KD I T++++QV +I GETG GKTTQVPQF+LEH S + C+IV +
Sbjct: 153 AFRQTLPIWSHKDEIIRTINNHQVCIIQGETGSGKTTQVPQFILEHYRSLNKRCRIVVVE 212
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRI+ +V ER+ +ER E +G ++GY+IRLES+ + + FCT+GVLLR L+ S
Sbjct: 213 PRRIAVVNVCERVCLERNEKMGHSVGYQIRLESRISPMTVLTFCTSGVLLRTLMFGETS- 271
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
V+ ++HII+DE+ ERD++ DF+L ++RD+L + +L LILMSATLD+D
Sbjct: 272 ------------VANISHIIIDEVQERDKFCDFLLIVLRDLLSKFRNLHLILMSATLDSD 319
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK-------------------------- 396
FS+YF CPV+ VPG +PVK ++LEDVL + +
Sbjct: 320 MFSKYFMNCPVVSVPGRMFPVKEYFLEDVLKLTRYMSKPMLKIKQELMSKKLQKEKLQKW 379
Query: 397 -------------SAESNHLDSASLIVPNEDPE--LTEENKSTLDEAISLAWSNDEFDML 441
+ N + + ++ ED + + E T++EA L +D+ L
Sbjct: 380 EALINSECKTDKENVSPNPILDKNNVIKKEDADSSVNEVMDITIEEAF-LTGLDDKMTQL 438
Query: 442 LELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTA--- 498
L L+ E +YQH+ TG+TPLMV A + + + LL LGAD +KA + +TA
Sbjct: 439 LHLILSEHVS--VDYQHSKTGMTPLMVAAARNSLNTIEQLLLLGADMSIKASNDKTAFDW 496
Query: 499 -LQLGEQE--------NQPEVAQIIKKHM---ENALSDSMKQQLLDKYLATVNPELIDLV 546
+ LG +E ++ +AQI + + E +LS+ K+ LLD Y ++ N + ID+
Sbjct: 497 TVMLGHKEAADLIQSYSEKNIAQINEAVLISKETSLSEEDKE-LLDIYHSSFNDDDIDIN 555
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLA-NPFFRDTSKFVIIPLHSMVPSV 605
L+ LL ++ GAILVFL G++DI ++R+ + + F K+V+ LHS + +
Sbjct: 556 LLMSLLIQVHCTQPKGAILVFLAGYDDITAVKERIASEDAKFFGHMKYVVYTLHSKMQTG 615
Query: 606 QQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 665
Q+KVFK+ P RKIIL+TNIAET++ IDDV YVIDSG+MKEK +DP NVS L W+
Sbjct: 616 DQRKVFKQTPHNVRKIILATNIAETSLNIDDVAYVIDSGKMKEKCHDPLTNVSGLNKIWI 675
Query: 666 SKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NC 724
S+ A+QR GRAGR Q G+CY L+S +R ++ Q P + R+ ++ELCL KLL P N
Sbjct: 676 SQYCAEQRKGRAGRTQPGVCYRLFSSIRYKAMEPQQTPAMLRLSLQELCLHSKLLAPANT 735
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I +FL K ++PP R+++ L+ I AL E +TELG L L V P + K+L +
Sbjct: 736 PIAEFLSKAIEPPPFTVTRSSVQHLKTIEALDSWEDLTELGIHLLDLPVEPRLGKILLYG 795
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
++ CLDP LT+ C Y DPF LP+ ++K+ + + A+ G SD + ++ AF+
Sbjct: 796 CILKCLDPVLTIVCCLAYNDPFVLPLRSSQKQELNLVRQKFAA--GTFSDHMVLLRAFQG 853
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNAR 900
W+ A+ G E FC + F+SS M M++G+R QL +L +GF+ P D+ + N+
Sbjct: 854 WQQARSNGWEKSFCQKNFISSATMEMIMGIRTQLLAQLRASGFVRSRAPGDIRDLNANSE 913
Query: 901 VPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK----------- 949
+ A L AGLYP +AR+ + + T KV +H S K
Sbjct: 914 NWAAVKAALCAGLYPNLARV----DREQGVLRTRKECKVNIHTSSALRKVSNNNNNNNNE 969
Query: 950 -----LSFKKTDDCP--LMVYDEITRGDGGMHVRNCTVVGPLPLLLLA--TEIAVAPAPD 1000
+S K ++ P ++Y+E+ R H++ CTVV PL + + + + + + +
Sbjct: 970 ISLAQVSLKTIENLPSDWIIYEELERYGRYCHLKRCTVVSPLTIAIFSGPSRLPLESVCE 1029
Query: 1001 NEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGST 1060
E + + + D D+D E+++KT G ++ +D W+ F
Sbjct: 1030 AE-AYQPNGIVDVDSDS--------EVEEKTEGNRS-----------SLKIDDWVLFKID 1069
Query: 1061 ALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
+ + LR++ L K+ P + P + + + S+LS
Sbjct: 1070 SEAAQLVLQLRQKWHSLFLRKMRTPGRPGLPFDDIVVKTVISVLS 1114
>gi|326667516|ref|XP_695496.5| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Danio
rerio]
Length = 1329
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 369/1154 (31%), Positives = 589/1154 (51%), Gaps = 152/1154 (13%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F S ++ F ++L+N ERA +H + + +G SKS G+G R +
Sbjct: 22 IDEEVKIAVNIALERFQYSDEKELDFPSSLTNSERAFIHRLAQSLGYISKSRGKGCSRFL 81
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGE-KLDANQSRKS-- 140
+V ++ + + + S + S + ++Q L +P E + + A + +S
Sbjct: 82 TV----RKKDGMEAQRSSMSCSLSPSCRALVQSLMQRFPISSRERSQLQPHAERGLQSPP 137
Query: 141 DKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITST 200
D T K + ++ + + R L R LP+ ++ I +
Sbjct: 138 DTTDSK--------SRTSGRLSHGIPQVPPRRSSAPELDAF---RKALPVYELQEQIIQS 186
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERG 260
+ +QVVL+ GETG GKTTQ+PQFLL+ + C+I CTQPRR++ +VAER++ ERG
Sbjct: 187 IRDHQVVLVLGETGSGKTTQIPQFLLDDCSATASPCRIFCTQPRRLATIAVAERVAAERG 246
Query: 261 ENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTH 320
ENIG +GY+IRLES+ + + FCT+GVLLR L++ + +S +TH
Sbjct: 247 ENIGQTVGYQIRLESRVSPKTLLTFCTSGVLLRTLMA-------------GDEALSTVTH 293
Query: 321 IIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFT 380
+IVDE+HERD +DF+L ++++L P+LRL+L SA LD F +YFG CPVI + G
Sbjct: 294 VIVDEVHERDGLTDFLLTKMKEVLQKMPNLRLVLSSAALDVSLFMRYFGSCPVIHIKGCP 353
Query: 381 YPVKSFYLEDVL-----------SILKSAESNHLDSASLI------VPNEDP-------- 415
Y VK +LED+L K A+ SL VP DP
Sbjct: 354 YEVKQLFLEDILRSTAYTNKDMIKYKKEAQKEESQQCSLSEWCERDVPQADPPERPTVCV 413
Query: 416 ----------------ELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGSP 451
+++E++ S+L D IS + N + D +L +L +
Sbjct: 414 LQDNQLLDDGGDSVFSQMSEKDVSSLEPWLLREMDSCISSIFLNQDADAFTQLFNLILNE 473
Query: 452 NV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEV 510
N+ +Y+H+ T T LMV AG+G V LL++GA+ +KA +G TAL + Q E
Sbjct: 474 NISVDYRHSETSATALMVSAGRGFVSHTEQLLNMGANINIKASNGWTALDWAKHFKQTEA 533
Query: 511 AQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+++ H+ + A +P+ +L C D E + +
Sbjct: 534 VDLLESHI---------------WCAEASPQDEASLLQNSSCELSCEDQE--LLKAYHHS 576
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
++D F + LHS + + QKKV K P G RKIILSTNIAET
Sbjct: 577 FDDEKGXXXX--------XXXXFQVFVLHSSMQTSDQKKVLKSTPKGVRKIILSTNIAET 628
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+IT+ DVV+VIDSG++KEK+YD NNV+ L+ W+SKASA QR GRAGRC+ G+C+HL+S
Sbjct: 629 SITVSDVVFVIDSGKVKEKAYDALNNVTMLKMVWISKASALQRKGRAGRCRPGVCFHLFS 688
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVL 749
+LR +++ + Q+P++ R+P++ELCL KLL P NC + +FL + +PP T+++A+ +L
Sbjct: 689 RLRFSNMLEHQIPQLLRMPLQELCLHTKLLAPINCPVAEFLSRAPEPPHINTVKHAVQML 748
Query: 750 QDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLP 809
+ I A+ E +TELG L L V P + KM+ A+++ CLDP LT+AC +R+PF LP
Sbjct: 749 KTIDAMDPWENLTELGLHLADLPVEPHLGKMVLCAVVLKCLDPVLTIACTLAHREPFVLP 808
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMN 869
+++ A + + SD +A++ AF+ W+ A+ G E FC + F+S M
Sbjct: 809 AQAAQRRVAMLCRRRFTA--NTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATME 866
Query: 870 MLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
+++ MR QL +L GF+ D+ + N+ ++ A L+AG+YP + H+
Sbjct: 867 IIVSMRTQLLGQLRATGFVRARGGGDIRDVNQNSENWAVVKAALVAGMYPNLI-----HR 921
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFKK----------TDDCP--LMVYDEITRGDGGM 973
+G + KVRLHP S+ + +KK D P ++YDE+TR
Sbjct: 922 DGLS-LSGEKEKKVRLHPTSVLSQPQYKKIPPANGQAAAVDSLPTDWLIYDEMTRAHRIA 980
Query: 974 HVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSG 1033
VR CT V PL + L A P + ++ + AD ++S E++D+ S
Sbjct: 981 SVRCCTAVTPLTIALFG---GGAKLPSSA--LQEAVLQRGSADSSDS-----EVEDQCSA 1030
Query: 1034 QHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVL 1093
+ + +D W+ F ++ LR+R L ++ P KA +
Sbjct: 1031 RQAH-----------LTLDHWINFRLDPETAELVFGLRQRWQSVFLRRIRSPSKACSQLD 1079
Query: 1094 EASMYAMASILSYD 1107
E+++ + S+LS +
Sbjct: 1080 ESTIRTLVSVLSAE 1093
>gi|301613947|ref|XP_002936459.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Xenopus (Silurana) tropicalis]
Length = 1406
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 380/1182 (32%), Positives = 591/1182 (50%), Gaps = 173/1182 (14%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F S + F ++L++ ERA +H + + +G+ SKS G+G R
Sbjct: 33 IDEEVKIAVNIALEKFRYSDQKEMEFPSSLTSTERAFIHRLAQSLGLVSKSKGKGPNR-- 90
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
C + K+ + L S T ++ +K + +L +P + E E L +
Sbjct: 91 --CLTLKKKNGSEASSSLMSCTLTQNTKKAVCNLIQRFPLTNKERTELLPKTE------- 141
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE---RSKLPISSFKDVITST 200
RG I + EI L I + + R + R LP+ ++ I
Sbjct: 142 RGNVYAI----EAENREIGKTSGCLNGGIPQVPDKRGESKYDFFRQSLPVFEKQEDIIRI 197
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERG 260
+ +N+VVLI GETG GKTTQV S C C + R + I +
Sbjct: 198 IKNNKVVLIVGETGSGKTTQV---------SYNVHCD--CFKGTRSVCLIYSSFIKLXNA 246
Query: 261 ENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTH 320
EN+ + + + ++ + + FCTNGVLLR L+ +SA+TH
Sbjct: 247 ENLVKTLIF--FMLNRVSPKTLLTFCTNGVLLRTLMG-------------GDSTLSAITH 291
Query: 321 IIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFT 380
IIVDE+HERDR+SDF+L +RD + +P L+LIL SA LD + F +YFGGCPVI + G
Sbjct: 292 IIVDEVHERDRFSDFLLTKLRDAIQEHPTLKLILSSAALDVNLFIRYFGGCPVIYIQGRP 351
Query: 381 YPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSN----- 435
+ VK +LED+L S + ++ N++ + E+ K+TL E S N
Sbjct: 352 FEVKEMFLEDIL------RSTGYRNKGMLKYNKEKQCEEKQKTTLTEWYSAKQKNMKPET 405
Query: 436 ----------DEFDML-------------------------------------------L 442
+E+D+L
Sbjct: 406 QRQRSVPAIKEEYDILDDGGDTAFGQMTEKDANCLEPWLIKEIDACLSDIWLYRDKDAFA 465
Query: 443 ELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQL 501
+L L + NV +Y+H+ T TPLMV AG+G + V L+S+GA+ Q KA +G AL
Sbjct: 466 QLFHLISTENVSVDYRHSETSATPLMVAAGQGFLSHVEQLISMGANIQSKASNGWMALDW 525
Query: 502 GEQENQPEVAQIIKKHM---------ENALSDS-------MKQQLLDKYLATVNPELIDL 545
+ Q EV +++ + EN L S ++LL Y + + E +DL
Sbjct: 526 AKHFGQTEVVDLLESYSASLETEDLDENTLVQSDGNDLSIEDRELLKAYHHSFDDEKVDL 585
Query: 546 VLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVP 603
LI +L IC ++ GAIL+FLPG+++I RDR+L + F + ++ + LHS +
Sbjct: 586 DLIMHVLFNICQITDTGAILIFLPGYDEIVGLRDRILLDDKRFADNAQRYHVFMLHSNMQ 645
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+ QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D NNV+ L+
Sbjct: 646 TSDQKKVLKLPPAGIRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNNVTMLKMV 705
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP- 722
W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ RIP+ ELCL KLL P
Sbjct: 706 WISKASAIQRKGRAGRCRPGICFRLFSKLRFQNMLEFQTPELLRIPLHELCLHTKLLVPI 765
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
NC + DFL K +PP ++ +RNA+ +L+ I A+ E +TE+G L L V P + KM+
Sbjct: 766 NCPVADFLMKAPEPPPALIVRNAVQMLKTIDAMDNWEDLTEIGHHLADLPVEPHLGKMVL 825
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
A+++ CLDP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF
Sbjct: 826 CAVILKCLDPILTIACTLAYRDPFVLPSQASQKRAAMLCRKRFTA--GTFSDHMALLRAF 883
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHN 898
+ W+ AK G E FC + F+S M +++G+R QL +L +GF+ D+ + N
Sbjct: 884 QAWQKAKSDGWERAFCEKNFLSQATMEIIIGLRTQLLGQLRASGFVRARGGGDIRDVNIN 943
Query: 899 ARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAK-VRLHPHSLNFKLSFKK--T 955
+ ++ A L++G+YP + H + V + K VR HP S + +KK +
Sbjct: 944 SENWAVVKAALLSGMYPNLI-----HVDRENMVLSGVKEKRVRFHPSSALSEPQYKKIPS 998
Query: 956 DDCP----------LMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD 1005
+C +VYDE+TR +++ C+VV P+ +L A + + E
Sbjct: 999 ANCQAEAVQALPTDWLVYDEMTRSHRIANIKCCSVVTPVTAVLFAGPARLPSSALKEPSS 1058
Query: 1006 ED--DDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALD 1063
D + +D +D D + + T+ +D WL+F
Sbjct: 1059 FQVGDGIPNDSSDSEMEDRNTFTL-------------------ATLKLDEWLHFRLDPEA 1099
Query: 1064 IAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
++ LR++ L ++ P K V EA++ + ++L+
Sbjct: 1100 AGLLFQLRQKWQSLFLRRIQAPSKPWSQVDEATIRVIIAVLN 1141
>gi|270001262|gb|EEZ97709.1| benign gonial cell neoplasm [Tribolium castaneum]
Length = 1181
Score = 554 bits (1427), Expect = e-154, Method: Compositional matrix adjust.
Identities = 355/996 (35%), Positives = 535/996 (53%), Gaps = 87/996 (8%)
Query: 25 AEATRIRISQILDGFLASKD-EVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+E RI + + FLA + Y+F NL+N ER +H+ + S+S G+ R +
Sbjct: 26 SETFRIEVDKAFQTFLADGGAKEYSFPTNLNNFERKHIHQKAASYNLVSRSHGKDPNRVI 85
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDAN-QSRKSDK 142
++ K +G+K + + P E +LD Q
Sbjct: 86 TIYK--------------------KGAKSNFESFYIDLTP---ETVRELDKTLQVVGMSP 122
Query: 143 TRGKRVDIFCKPKM-SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTV 201
+ C+ K+ K + + R+ QI R +LPI + VI S V
Sbjct: 123 MGAPPLRWTCRDKVFGKLSLGVPPPVTAPRLTP-----QIAAFRKQLPIYDLRQVIVSKV 177
Query: 202 DSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGE 261
N+V+++S ETG GKTTQ+PQF+++ +GE C+I+CTQPRRISA SVAER+S ERG
Sbjct: 178 RKNRVLIVSSETGSGKTTQIPQFIMDDALQRGEPCRILCTQPRRISAVSVAERVSFERGA 237
Query: 262 NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHI 321
+G+ +GY IRLESK G + ++++CTNGVL+R L+S G+ L LTH+
Sbjct: 238 PLGETVGYHIRLESKVGSNCNLIYCTNGVLVRSLMS-GMGAL------------GTLTHV 284
Query: 322 IVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTY 381
I+DE+HERD+ SDF+L +R+ L ++L+LMSAT++ ++F +YF G V+ VPG +
Sbjct: 285 IIDEVHERDKLSDFLLICLRESLRKGAPIKLLLMSATINVEKFQRYFEGAEVLAVPGRLF 344
Query: 382 PVKSFYLEDVLSI-----LKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSND 436
++ F+L+DVL + + + N + A E+P E L I +
Sbjct: 345 AIREFFLDDVLELTGYDAVVREKRNFFEGAV----GENPLFDEVIMRVLQGGID---NEQ 397
Query: 437 EFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGR 496
+ LL+ + L P NY+H+ G T LM + V V L SLGAD + +K G+
Sbjct: 398 NWAQLLQFL-LTDMP--VNYRHSENGATALMAAVSQDNVDMVEKLCSLGADPHIPSKSGQ 454
Query: 497 TALQLGEQENQPEVAQIIKKHMENALSDSM--KQQLLDKYLATVNPELIDLVLIEQLLRK 554
TAL + E ++ E+ I+ N S + ++ LL Y T E I+ L+ +L+
Sbjct: 455 TALSIAENKHLEEILLIL-----NVTSRPLLPREDLLTNYYKTCADEDINYDLLIRLIYT 509
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
I + GAILVFLPG++DI DRLL D + + + LH + +Q +VFK
Sbjct: 510 IHLQYHTGAILVFLPGYDDIMICNDRLLETNI--DKNSYRVFFLHGSMNIKEQHEVFKPF 567
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
P RKIILSTNIAET++TIDDVVYV+D G+ K ++YD + +S+LQ+ W+SKA KQRA
Sbjct: 568 PDNVRKIILSTNIAETSLTIDDVVYVVDCGKAKVQTYDSCSGLSSLQTQWISKACVKQRA 627
Query: 675 GRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTL 734
GRAGR Q+G+C+HL+S+ R S D ++PEI R+P+EELCL K L N +I +FL
Sbjct: 628 GRAGRTQSGVCFHLFSRTRYDSFLDERIPEILRVPLEELCLNTKSLADNISIYNFLVMAP 687
Query: 735 DPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL 794
DPP S T++ AI L+ +GAL +E++T LGE L L++ P + KML ++ + CLDP L
Sbjct: 688 DPPSSNTVKTAIENLECLGALDKEERLTPLGEYLSQLTIEPHLGKMLIYSAIFKCLDPIL 747
Query: 795 TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQE 854
T+ + +DPF LP P R+ AA+ + SD + + AF W+++ + +E
Sbjct: 748 TIVASLAQKDPFQLP--PQANLRSFAAEKRKSLTANTYSDHMVYLKAFIKWQDSVKYRKE 805
Query: 855 AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS---CSHNARVPGIIHAVLMA 911
FC ++F+S M +L R QL +L F+P + +S + N+ ++ AV+ +
Sbjct: 806 RNFCREFFISPSTMETILKTRSQLLGQLRAAKFVPSNGTSMVALNTNSENWPLVKAVISS 865
Query: 912 GLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL-MVYDEITRGD 970
GLYP +A K G F T KV +H S + D PL +VYDE+ +
Sbjct: 866 GLYPKLA-----FKKGANFC-TRTEKKVLVHNTS-------PMSKDLPLWLVYDEMVKVR 912
Query: 971 GGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
G VR T V P+ + L+ P + + DE
Sbjct: 913 NGHQVRGVTPVTPVTISLMCGIKVTYPMQNYLEIDE 948
>gi|189241637|ref|XP_001808443.1| PREDICTED: similar to ATP-dependent RNA helicase A [Tribolium
castaneum]
Length = 1393
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 355/996 (35%), Positives = 535/996 (53%), Gaps = 87/996 (8%)
Query: 25 AEATRIRISQILDGFLASKD-EVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+E RI + + FLA + Y+F NL+N ER +H+ + S+S G+ R +
Sbjct: 238 SETFRIEVDKAFQTFLADGGAKEYSFPTNLNNFERKHIHQKAASYNLVSRSHGKDPNRVI 297
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDAN-QSRKSDK 142
++ K +G+K + + P E +LD Q
Sbjct: 298 TIYK--------------------KGAKSNFESFYIDLTP---ETVRELDKTLQVVGMSP 334
Query: 143 TRGKRVDIFCKPKM-SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTV 201
+ C+ K+ K + + R+ QI R +LPI + VI S V
Sbjct: 335 MGAPPLRWTCRDKVFGKLSLGVPPPVTAPRLTP-----QIAAFRKQLPIYDLRQVIVSKV 389
Query: 202 DSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGE 261
N+V+++S ETG GKTTQ+PQF+++ +GE C+I+CTQPRRISA SVAER+S ERG
Sbjct: 390 RKNRVLIVSSETGSGKTTQIPQFIMDDALQRGEPCRILCTQPRRISAVSVAERVSFERGA 449
Query: 262 NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHI 321
+G+ +GY IRLESK G + ++++CTNGVL+R L+S G+ L LTH+
Sbjct: 450 PLGETVGYHIRLESKVGSNCNLIYCTNGVLVRSLMS-GMGAL------------GTLTHV 496
Query: 322 IVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTY 381
I+DE+HERD+ SDF+L +R+ L ++L+LMSAT++ ++F +YF G V+ VPG +
Sbjct: 497 IIDEVHERDKLSDFLLICLRESLRKGAPIKLLLMSATINVEKFQRYFEGAEVLAVPGRLF 556
Query: 382 PVKSFYLEDVLSI-----LKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSND 436
++ F+L+DVL + + + N + A E+P E L I +
Sbjct: 557 AIREFFLDDVLELTGYDAVVREKRNFFEGAV----GENPLFDEVIMRVLQGGID---NEQ 609
Query: 437 EFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGR 496
+ LL+ + L P NY+H+ G T LM + V V L SLGAD + +K G+
Sbjct: 610 NWAQLLQFL-LTDMP--VNYRHSENGATALMAAVSQDNVDMVEKLCSLGADPHIPSKSGQ 666
Query: 497 TALQLGEQENQPEVAQIIKKHMENALSDSM--KQQLLDKYLATVNPELIDLVLIEQLLRK 554
TAL + E ++ E+ I+ N S + ++ LL Y T E I+ L+ +L+
Sbjct: 667 TALSIAENKHLEEILLIL-----NVTSRPLLPREDLLTNYYKTCADEDINYDLLIRLIYT 721
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
I + GAILVFLPG++DI DRLL D + + + LH + +Q +VFK
Sbjct: 722 IHLQYHTGAILVFLPGYDDIMICNDRLLETNI--DKNSYRVFFLHGSMNIKEQHEVFKPF 779
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
P RKIILSTNIAET++TIDDVVYV+D G+ K ++YD + +S+LQ+ W+SKA KQRA
Sbjct: 780 PDNVRKIILSTNIAETSLTIDDVVYVVDCGKAKVQTYDSCSGLSSLQTQWISKACVKQRA 839
Query: 675 GRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTL 734
GRAGR Q+G+C+HL+S+ R S D ++PEI R+P+EELCL K L N +I +FL
Sbjct: 840 GRAGRTQSGVCFHLFSRTRYDSFLDERIPEILRVPLEELCLNTKSLADNISIYNFLVMAP 899
Query: 735 DPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL 794
DPP S T++ AI L+ +GAL +E++T LGE L L++ P + KML ++ + CLDP L
Sbjct: 900 DPPSSNTVKTAIENLECLGALDKEERLTPLGEYLSQLTIEPHLGKMLIYSAIFKCLDPIL 959
Query: 795 TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQE 854
T+ + +DPF LP P R+ AA+ + SD + + AF W+++ + +E
Sbjct: 960 TIVASLAQKDPFQLP--PQANLRSFAAEKRKSLTANTYSDHMVYLKAFIKWQDSVKYRKE 1017
Query: 855 AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS---CSHNARVPGIIHAVLMA 911
FC ++F+S M +L R QL +L F+P + +S + N+ ++ AV+ +
Sbjct: 1018 RNFCREFFISPSTMETILKTRSQLLGQLRAAKFVPSNGTSMVALNTNSENWPLVKAVISS 1077
Query: 912 GLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL-MVYDEITRGD 970
GLYP +A K G F T KV +H S + D PL +VYDE+ +
Sbjct: 1078 GLYPKLA-----FKKGANFC-TRTEKKVLVHNTS-------PMSKDLPLWLVYDEMVKVR 1124
Query: 971 GGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
G VR T V P+ + L+ P + + DE
Sbjct: 1125 NGHQVRGVTPVTPVTISLMCGIKVTYPMQNYLEIDE 1160
>gi|241628392|ref|XP_002409971.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215503270|gb|EEC12764.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 1337
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 322/893 (36%), Positives = 499/893 (55%), Gaps = 108/893 (12%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQP 243
+R +LPI ++ + ST+ NQV ++ GETGCGKTTQVPQ+LLEH S G+ +I+CT+P
Sbjct: 97 QRQQLPIWQSREALVSTIARNQVTIVVGETGCGKTTQVPQYLLEHHASVGQPIRIICTEP 156
Query: 244 RRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRL 303
RR++A +VAER+S ER E +G +GY+IRLE++ + + CTNG+LLR L+ +
Sbjct: 157 RRLAAVAVAERVSAERNERLGHTVGYQIRLENRVSPKTLLTVCTNGILLRTLMGNDSA-- 214
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADR 363
++ +TH+IVDE+HERDR+SDF+L ++RD+LP + +L+LILMSAT+D +
Sbjct: 215 -----------MATITHVIVDEVHERDRFSDFLLIVLRDLLPKFRNLKLILMSATVDVEH 263
Query: 364 FSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI----------LKS---------------- 397
F +YFGGCPV++V +F+L L+ LKS
Sbjct: 264 FVKYFGGCPVLRVTHKFLFFHTFFLPCNLAATNYTSGEMVKLKSVQRKTEAQRAQLAKWC 323
Query: 398 -------------AESNHLDSASLIVPNEDPELTEENK-----------STLDEAISLAW 433
A +HL S E E+ E + + +D A+ AW
Sbjct: 324 EGTQSQNAIPNTDAWKSHLSVFSSRFAKEGLEVKEGEEEGAQRLDSTLAAEMDRALHQAW 383
Query: 434 ---SNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQL 490
+++ F LL L S NV +++H+ T T LM+ AG+G+ V LL+LGAD +
Sbjct: 384 MSGTDEAFSQLLYHF-LSESVNV-DHRHSETSATALMLAAGRGKTEVVEELLALGADPRA 441
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENA-------------LSDSMKQQLLDKYLAT 537
KA + TAL + Q + Q++ H+ LSD+ ++ L + Y +
Sbjct: 442 KASNDWTALDWAQHFQQEDAVQVLLAHLLVLQSGISRPDTGVPDLSDADREHL-ELYQRS 500
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF-FRDTSKFVII 596
++ + DL L+ LLR + ++GAILVFL G++D+ ++++LA+ F ++V+
Sbjct: 501 IDDDQTDLDLVFALLRTLHGSQDEGAILVFLAGFDDMASLKEKILADHHNFSSQMRYVLC 560
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
LHS V +Q++VF PPG RKIILSTNIAET+ITI DV +VIDSG++KEKS+D
Sbjct: 561 MLHSNVQCSEQRQVFNTMPPGVRKIILSTNIAETSITISDVSFVIDSGKVKEKSFDSLTG 620
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQ 716
+ L+S WVS+ASA QR GRAGR + G+C+HL+S+ R L FQ PE+ R+P++ELCLQ
Sbjct: 621 TTLLKSVWVSRASALQRKGRAGRTRPGVCFHLFSRQRFLGLAPFQQPELLRLPLQELCLQ 680
Query: 717 VKLL-DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
KLL PN I DFL + +PP + R A+ +L+ I AL E++TE+G L L + P
Sbjct: 681 AKLLVAPNVPIADFLARAPNPPAFMVTRTAVSLLKAIDALDPSEQLTEMGLHLLDLPIDP 740
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
+ KM+ +++++ CLDP LT+ C +DPF LP P +++ A A+ +LA+ SD
Sbjct: 741 QLGKMVLYSVVLKCLDPVLTIVCCLSVKDPFVLPTHPGQRRSAYLARRKLAA--DTYSDH 798
Query: 836 LAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PED 891
+A++ AF+ W+ A+ E +FC ++ +S M +L +R QL +L +GF+ D
Sbjct: 799 MALLRAFQGWQRARCENVERYFCERHCISGSTMATILAVRGQLLGQLRASGFVRARGSGD 858
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLS 951
+ + ++ ++ A L AG YP + R+ RR + ++VR H S+ +
Sbjct: 859 IKDLNAHSDNWAVVKAALCAGSYPSLLRV----DRERRQLVAQRASRVRFHTRSVLSQPE 914
Query: 952 FKKTDDCP--------------LMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+ T + ++Y E+ R + CT+V P+ + L A
Sbjct: 915 IRTTGEAGTTTRAAAVASLPTDWLLYGELARAGPTAYAHMCTLVSPVTVALFA 967
>gi|158297255|ref|XP_555531.3| AGAP007953-PA [Anopheles gambiae str. PEST]
gi|157015106|gb|EAL39691.3| AGAP007953-PA [Anopheles gambiae str. PEST]
Length = 875
Score = 548 bits (1411), Expect = e-152, Method: Compositional matrix adjust.
Identities = 328/906 (36%), Positives = 496/906 (54%), Gaps = 77/906 (8%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIV 239
+IV R LPI+ F ++I + NQV++ISG TG GKTTQVPQF+LE + C+I+
Sbjct: 14 EIVAVRKSLPIAQFHEIILKCIQHNQVIIISGNTGSGKTTQVPQFILEEAAQQNLPCRII 73
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRRISA +V+ER+ VER E +GD +GY+IRLES+ ++ +FCTNGVLLR L+ +
Sbjct: 74 CTQPRRISAVTVSERVCVERNEQLGDTVGYQIRLESRAKSTTNALFCTNGVLLRCLMGKH 133
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
S+ + +THII+DE+HERD+YSDF+L ++D L HL++ILMSAT+
Sbjct: 134 SSKF-----------LKNVTHIIIDEVHERDQYSDFLLIALKDKLSKNAHLKIILMSATI 182
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL---------------SILKSAESNHLD 404
++D FS+YF CPVI++PG +P+++F+LED+L ++KS E+ ++
Sbjct: 183 ESDTFSKYFNNCPVIEIPGRLFPIETFFLEDILLNVDTSNHNVKDIRKKMMKSFEAQAVE 242
Query: 405 SASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGL 463
I N D +E +++ + + W + D +L N+ ++QHT T +
Sbjct: 243 RTKPITVNMD----DETILLMNDILEVCWIENNPDDFRNFFTLIEEENISIDFQHTETKM 298
Query: 464 TPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALS 523
T LM+ A KG + V LL +GAD ++ K A H + S
Sbjct: 299 TALMIAAAKGYIAIVQKLLEMGADPSIQEKHNYNAFDWA-----------CFVHGSSTCS 347
Query: 524 DSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLA 583
D +KQ L +V + ID LI ++ IC +G ILVFLPG+EDI + L
Sbjct: 348 DILKQALNK----SVGDDRIDHNLIIDVILHICRKHPEGGILVFLPGFEDIQEQYG--LL 401
Query: 584 NPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDS 643
N + + LHS + + Q VFK P G RKIILSTNIAET+IT+DDVVYVIDS
Sbjct: 402 NSKVSNIHCIRMFMLHSKMQTADQHSVFKPVPSGVRKIILSTNIAETSITMDDVVYVIDS 461
Query: 644 GRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVP 703
G++K+K YD + S+L ++W+S+A A QRAGRAGR + G C+ LYS++R + + + +P
Sbjct: 462 GKVKQKYYDSLTSTSSLAATWISQACATQRAGRAGRTRPGTCFRLYSRMRHSEMDQYTLP 521
Query: 704 EIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
EI R+P+ E+CLQ L+ + +I++FL K + P S +I+ +I LQ +GAL +E VT+
Sbjct: 522 EIMRVPLTEICLQTALIIKDESIQEFLNKAITAPSSTSIKQSIKYLQKVGALDDEESVTD 581
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG L L V + KML + IL+ C +P L + C D F +P P +K+RA +
Sbjct: 582 LGYTLAELPVDARLGKMLLYGILLKCYEPVLLVVCILSINDLFVIPPFPGDKERAKKVRQ 641
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
+LA SD ++ A++ W +A+ + C+Q F++ G + M+ +R +L L
Sbjct: 642 DLAE--NSYSDCYCLLRAYQRWLDARSVQKRKELCNQLFLNHGKLTMVSELRNKLHAHLC 699
Query: 884 KNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKV 939
G + P V + A ++ +L+ GLYP V+ L K ++T K+
Sbjct: 700 SIGVVKSYGPGSVKDLNEFANNWSLVKGILLVGLYPNVSYLEKYSKT----MKTRFEKKI 755
Query: 940 RLHPHS-LNFKLSFK-KTDDCPL------MVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
+HP S + K S K KT D L + ++E + G +R TV+ P+
Sbjct: 756 FIHPSSVVGGKASKKQKTTDNALCLPSEWITFEEKCKSGRGSMIRCNTVISPIT------ 809
Query: 992 EIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVV 1051
IA+ P + DD E +D E D + +DD + E+V S + +V
Sbjct: 810 -IAIFAGPLSLDDTE----CITKSDAMEQDHCRIAVDDWINLMAKESVAKSVLHTRRMVH 864
Query: 1052 DRWLYF 1057
+L F
Sbjct: 865 GLFLKF 870
>gi|432962041|ref|XP_004086639.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Oryzias
latipes]
Length = 1383
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 323/878 (36%), Positives = 492/878 (56%), Gaps = 70/878 (7%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
RS LP+ + I + N+VVLI GETG GKTTQ+PQFLL+ S + C+I CTQPR
Sbjct: 132 RSTLPVWESRVEILQLIQQNRVVLILGETGSGKTTQIPQFLLDDCSSSSQCCRIFCTQPR 191
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R +A +VAER++ ERGE++G +GY +RLES+ + + +CT+GVLLR L++ S
Sbjct: 192 RSAAIAVAERVAAERGESVGQTVGYHVRLESRVSPKTLLTYCTSGVLLRTLMAGDAS--- 248
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
+S +TH+IVDE+HERD +DF+L I+D+L P L+LIL SA+LD D F
Sbjct: 249 ----------LSTVTHVIVDEVHERDGVTDFLLTKIKDVLKKIPSLKLILSSASLDVDLF 298
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHL------DSASLIVPNEDPELT 418
QYFG CPVI + VK + + + + S + H+ DS + E L
Sbjct: 299 RQYFGSCPVIS--QWCGAVKQKAVGEEQNDVSSPDFLHVRGRGAADSGAFNQTGEKTRLQ 356
Query: 419 EENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGD 477
+ +D IS + ++ ++ +L SL + V + H+ TG TPLM+ A +G V
Sbjct: 357 RQ----IDACISKLFFYEDQEIFCQLFSLILNEGVDVDCSHSETGATPLMMSAARGFVTQ 412
Query: 478 VCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIK----KHMENALSDSM------- 526
+ LLS+GAD + +G TAL + +Q E +++ +E +S+
Sbjct: 413 MQQLLSIGADLNKRESNGWTALDFAKHFHQTEAIDLLQCCKYLQVETTAEESILIPSDYV 472
Query: 527 -----KQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL 581
++ LL + + + + DL LI LL IC S DGA+L+FLPG+E+I R+ +
Sbjct: 473 EPNNDEEDLLKLFHHSFDGQWGDLKLIMTLLHHICSTSSDGAVLIFLPGYEEIVALREHI 532
Query: 582 LANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F + ++ LHS V ++ +K K PPG RKIILS+NI ET+ITI+DVV+
Sbjct: 533 LNEDKMFCTHPESYQVLILHSDVHTLDRKMAVKPSPPGIRKIILSSNIGETSITINDVVF 592
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VIDSGR+KEK +D ++ STL+ SW+SKAS QR GRAGRC+ G C+HL+S+LR + +
Sbjct: 593 VIDSGRVKEKYFDAVSHTSTLKMSWISKASVLQRKGRAGRCRPGYCFHLFSRLRFRDMLE 652
Query: 700 FQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
F VP++ +P++ LCLQ KLL P +C I DFL K PP + ++ +A+ VL+ I AL +
Sbjct: 653 FPVPQLLLMPLQGLCLQTKLLAPSSCLIGDFLSKAPQPPPARSVSSAVQVLKKIDALEQN 712
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
E +TELG +L L V P + KM+ +++ CLDP LT+ CA YRDPF +P ++K+ A
Sbjct: 713 EDLTELGYRLADLPVEPQLGKMVLCGVVLKCLDPILTIVCALAYRDPFIIPTENSQKRSA 772
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
+ AS SD +A++ AF+ W+ A+ G E FC + F+S M+++LGMR QL
Sbjct: 773 LNCRKRFAS--NSFSDHMALLRAFQAWQKARSDGWERTFCEKNFLSQATMDIILGMRTQL 830
Query: 879 QTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA 934
L GF+ D+ + N+ ++ A L+ G+YP + ++ +E
Sbjct: 831 LGHLRAIGFVRARGGSDIRDVNLNSENWAVVKAALVTGIYPNLIKVNKKSSLLSSLME-- 888
Query: 935 GGAKVRLHPHSLNFKLSFKKTDD---------CPLMVYDEITRGDGGMHVRNCTVVGPLP 985
KV H S+ + K+ D ++YD+++RG VR C++V +
Sbjct: 889 --KKVHFHSTSVLSQQPNKEVDSPAENGPAFPTDWLIYDQMSRGHRMASVRCCSLVTSVT 946
Query: 986 LLLLA--TEIAVAPAPDNE----DDDEDDDMSDDDADE 1017
+ + + + + DN DD D ++++ DE
Sbjct: 947 VAIFGGCARLPCSASYDNAALKTKDDRDIELAEMKVDE 984
>gi|47210322|emb|CAF91170.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1297
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 329/905 (36%), Positives = 477/905 (52%), Gaps = 158/905 (17%)
Query: 219 TQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGG 278
Q+PQFLL+ K E C+I CTQPRR++ +VA+R++ ERGEN+G +GY IRLES+
Sbjct: 116 VQIPQFLLDECHKKREPCRIFCTQPRRLATITVADRVAAERGENVGKTVGYHIRLESRVS 175
Query: 279 KHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIV----------DEIHE 328
+ + FCT+GV LR L++ S +S +TH+IV DE+HE
Sbjct: 176 PKTVLTFCTSGVFLRTLMAGDAS-------------LSTVTHVIVKTPSLAVCKQDEVHE 222
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
RD +DF+L +R++L +P L+LIL SA LDAD F QYFG CPVI + G + VK +L
Sbjct: 223 RDGLTDFLLTKLREVLQKFPSLKLILSSAALDADLFRQYFGSCPVIHLKGRLFEVKELFL 282
Query: 389 EDVL--------SILKSAE----------------------SNHLDSASLIVPNEDPELT 418
EDVL +LK E S + S +P + L
Sbjct: 283 EDVLKLTGFRSKEVLKHDEVAQKGEKKRKSLTEWCETVKRSSAEEEEGSGGLPGDGAVLD 342
Query: 419 EENKS--------------------------TLDEAISLAWSNDEFDMLLELVSLEGSPN 452
E+ S +D IS + N++ D ++L +L N
Sbjct: 343 REDGSFGSPVDKQDTRHDEGGPGQLEPWLVKEMDSCISSIFLNEDQDAFIQLFNLILYEN 402
Query: 453 V-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVA 511
V NY+H+ TG T LMV AG+G + + LL +GAD +KA +G TA+ + +Q E
Sbjct: 403 VNVNYRHSETGTTALMVTAGQGFLPQMEQLLHMGADVGIKASNGWTAVDFAKHFHQNESM 462
Query: 512 QIIKKHME-------------NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMD 558
+++K +E A S ++LL Y + + EL+DL LI LL IC
Sbjct: 463 ELLKSFLEVCRPGGPAVDQQVTAESGDKDEELLKLYHQSFDDELVDLDLIMDLLHYICST 522
Query: 559 SEDG----------------------------AILVFLPGWEDINKTRDRLLANP--FFR 588
S DG A+L+FLPG+++I RDR+L N F
Sbjct: 523 SSDGEPSASIDQMCLMDPCGSLSTRSICLLLGAVLIFLPGYDEIVSIRDRILYNDNRFSL 582
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
+ ++ + LHS + + QKK K PP G RKIILSTNIAET+ITI DVV+VIDSG+ +
Sbjct: 583 QSERYQLFILHSEMQTQDQKKALKNPPAGVRKIILSTNIAETSITISDVVFVIDSGKGSK 642
Query: 649 ------KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQV 702
KS+D + VS L++ W+SKASA QR GRAGRC+ G C+HL+S+LR ++ +FQV
Sbjct: 643 CPFSLKKSFDTLSRVSMLKTVWISKASALQRKGRAGRCKPGCCFHLFSRLRFDNMLEFQV 702
Query: 703 PEIKRIPIEELCLQVKLLD-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
P++ R+P++ELCLQ KLL P+C + +FL K PP + I+NA+ +L+ I A+ E +
Sbjct: 703 PQLLRMPLQELCLQTKLLAPPSCQVAEFLSKAPQPPPAHAIKNALQMLKSIDAMEQHEDL 762
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T+LG L L V P + KM+ A+ + CLDP LT+AC YRDPFTLP ++KK A
Sbjct: 763 TDLGFHLADLPVEPHLGKMVLCAVALKCLDPILTIACTLAYRDPFTLPAEGSKKKAALHC 822
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTE 881
+ AS SD +A++ AF+ W+ A+ G E FC +YF+S MNM+ GMR QL +
Sbjct: 823 RKHFAS--SSFSDHMALLRAFQAWQKARSDGWERAFCEKYFLSQATMNMIFGMRTQLLGQ 880
Query: 882 LIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA 937
L GF+ D+ + N+ ++ A L+AG+YP +A + + ++
Sbjct: 881 LRAIGFVRAHGGSDIRDVNLNSENWAVVKAALVAGMYPNLAHI----DQETALLSSSRKK 936
Query: 938 KVRLHPHSLNFKLSFKKT----------------DDCP--LMVYDEITRGDGGMHVRNCT 979
K+ HP S+ K+ + P +VYDE++RG + R C+
Sbjct: 937 KLHFHPTSVLNPAHLKEVGRTVVSGPQSSPAQSPQNYPTEWLVYDEMSRGHRMVVTRCCS 996
Query: 980 VVGPL 984
+ G L
Sbjct: 997 LSGWL 1001
>gi|326428596|gb|EGD74166.1| hypothetical protein PTSG_06173 [Salpingoeca sp. ATCC 50818]
Length = 1404
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 349/977 (35%), Positives = 510/977 (52%), Gaps = 90/977 (9%)
Query: 32 ISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKR 91
IS+ F S E F ++LS+ ER +H K G +KS G+G R + + K K
Sbjct: 51 ISREFTTFAESDREELQFPSSLSSFERKYIHHYAPKHGFITKSYGKGDSRHIMIRKPKNA 110
Query: 92 VETDKGKEILPSLTFSEGSKLVLQDLFTHYPP---DDGEPGEKLDANQSRKSDKTRGKRV 148
E + +L S + + PP DD + K S K T+G R
Sbjct: 111 AAE---HEYMLTLDPKVASYATV-----NAPPLSEDDDDLVRKGMPLASNKKTWTKGSRA 162
Query: 149 DIFC----KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSN 204
C +PK K Q E + +LP ++ + + +
Sbjct: 163 GPKCIVPPEPKTPK---------------------QFREFQQRLPAAAHEQELLELLQHE 201
Query: 205 QVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIG 264
QVVL+SGETGCGKTTQVPQF++ ++ C I+C+QPRRISA SVA+R++ E G +G
Sbjct: 202 QVVLVSGETGCGKTTQVPQFVMRDAAARDMPCTILCSQPRRISAMSVAKRVAQEWGCRLG 261
Query: 265 DNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVD 324
+GY +RLESK G +++ FCT G LL+ +++ + +TH+++D
Sbjct: 262 STVGYHVRLESKAGAETNLAFCTTGWLLQRVITDIT--------------LKNITHVVLD 307
Query: 325 EIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVK 384
EIHERDR+SDF+L +R L P +RL+LMSATL +D F+ YFGGCP + + G YPV+
Sbjct: 308 EIHERDRFSDFLLVCMRKCLELRPDIRLVLMSATLHSDLFTDYFGGCPRVHMQGIAYPVE 367
Query: 385 SFYLEDVLSIL------KSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEF 438
+L VLS L + + S ++P D EL E T E ++++
Sbjct: 368 DVFLGGVLSRLGRTMGVTQGDIENQASCPDVIPELD-ELIEHGWHTEGEE----YADNVK 422
Query: 439 DMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLK-AKDGRT 497
++ LV + + NY+H+ TG++ LM+ A KG V ML LGA +G T
Sbjct: 423 RIMHHLVITD--VDAVNYRHSRTGVSVLMLAAAKGDAETVDMLQRLGARHDTACTTNGWT 480
Query: 498 ALQLGEQENQPEVAQIIKKHMENALS----DSMKQQLLDKY-----LATVNPELIDLVLI 548
A Q ++A + +ALS +Q L+ Y L V E +D L+
Sbjct: 481 AAQFARNFAFEDLAVKLDDTSGDALSLDPEARFEQALVSAYEKRRGLGKV--EELDYELM 538
Query: 549 EQLLRKICMDSEDG--AILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
L+ I D G AILVFLPG +I R + R KF+I+ LHS +
Sbjct: 539 ADLIETIVKDEPKGPGAILVFLPGHAEITAMRAACW-DLEHRIGKKFMIVRLHSSCTLRE 597
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q+ F+RPP G KI+LSTNIAET++TIDDVVYVIDSGRMKEKS+D V+TL + W S
Sbjct: 598 QQSAFQRPPKGKVKIVLSTNIAETSVTIDDVVYVIDSGRMKEKSFDTVTGVNTLMTVWAS 657
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
KA++ QR GRAGRCQ G+CYH++S+ + L DFQ PE+ R+ +E+LCL + L I
Sbjct: 658 KANSTQRRGRAGRCQPGVCYHMFSRETFSYLDDFQRPEMLRVSLEDLCLNARTLT-TSTI 716
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
E FL + +PP S I +A+ L+ I AL E++T G++L LS+ P +++M+ A+
Sbjct: 717 ESFLNEAPEPPSSRAIGHAVQYLKHIQALDKSERLTVFGQRLCQLSLEPPLARMVLLAVH 776
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
M CLDP LTL C +R P LPI P ++ A A +LA G SD A+I+A +
Sbjct: 777 MGCLDPILTLCCIRSHRSPLRLPIDPAQRSEAKKAHKQLAQ--GQHSDHFALISAVARYH 834
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-IPEDVSSCSHNARVPGII 905
A+ +G FC ++++ + + GM++Q+ +L + +D+ + NA ++
Sbjct: 835 QARMKGSARQFCERFYLHESTLETIEGMKQQITNQLRRMILHTRDDMETADANANSWPVV 894
Query: 906 HAVLMAGLYPMVARLRPPHKN-GRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYD 964
A L+AG YP +AR P + RF AKVR S + S K + +++D
Sbjct: 895 LACLVAGAYPNLARRNPGQQTYATRFQRK---AKVR----SESSVSSAKPARNQGWLIFD 947
Query: 965 EITRGDGGMHVRNCTVV 981
EITR G + CT+V
Sbjct: 948 EITRLGGATLLDTCTLV 964
>gi|328696978|ref|XP_001944198.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Acyrthosiphon pisum]
Length = 1170
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 326/1033 (31%), Positives = 559/1033 (54%), Gaps = 110/1033 (10%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+++ +R + L F++S + YTF ++L++ ER +H ++G+ SKS G+ R +
Sbjct: 8 LSQDSRDSLLHQLQKFISSDTKSYTFPSSLTSEERKYLHLKSAELGLKSKSYGKPGHRSI 67
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYP----------PDDGEPGEKLD 133
++ KK+V S+ S S +++ + H P P+ +P ++
Sbjct: 68 TIQMDKKKVNNKAC-----SIEVSVASNDIIKKICDHVPITKQMYDDLLPNPMKPYRRMA 122
Query: 134 ANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSF 193
+++ + + C MS A +++D ++ R LPI +
Sbjct: 123 VANCKRN-------LPLMCDKPMSIPRFA---------VDED-----LLLMRKSLPIWAK 161
Query: 194 KDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAE 253
K IT +++N VV+I+ ETG GKTTQ+PQF+++ +K + C+++C QPRRI+A S+A+
Sbjct: 162 KGQITHAIENNPVVIITAETGSGKTTQIPQFIIDDSAAKNKPCRVICCQPRRIAAISMAD 221
Query: 254 RISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKD 313
R+S ERGE+IG + GY++RLES + ++I++CT GVL R L+ + + N+P K
Sbjct: 222 RVSNERGESIGMSTGYQVRLESCVSQDTTIIYCTTGVLTRTLMDR-----HQKDNEPNKG 276
Query: 314 DVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPV 373
+ ++H+IVDE+HERD++ DF+L +R +LP Y HL+LILMSAT D FS YF CPV
Sbjct: 277 MLMNVSHVIVDEVHERDKHVDFLLIALRMILPKYNHLKLILMSATADIHLFSNYFNNCPV 336
Query: 374 IQVPGFTYPVKSFYLEDVLSILK-------------------------SAES----NHLD 404
++V G +PV+ ++LED+L +K + E+ N ++
Sbjct: 337 LKVEGKIFPVQDYFLEDILDTIKYESPSMSRIKNKTKIGYWDNDIVERTVEAVQNMNLIE 396
Query: 405 SASLIVPNEDPELTEENKSTLDEAISLAWSN---DEFDMLLELVSLEGSPNVYNYQHTLT 461
+ ++P++ E KS LD+ + W N ++ D ++ + EG P +YQH+ T
Sbjct: 397 PITTLMPDQ-----EWLKSELDDCMHQIWFNAEVEQIDRMIYYIMSEGIP--VDYQHSDT 449
Query: 462 GLTPLMVLAGKGRVGDVCMLLSLGADCQLKAK----DGRTALQLGEQENQPEVAQIIKKH 517
G+T LM++A G V LL++GA+ ++ + D T +Q + ++ II
Sbjct: 450 GVTLLMLVAVHGLNDYVTTLLNMGANPNIRTRVFNMDAATWATEFKQFDTRDL--IINSK 507
Query: 518 MENALSDSMKQQLLDK---------YLATVNPE-LIDLVLIEQLLRKICMDSEDGAILVF 567
+D K + LD+ Y ++ P +ID LI L++ I G+ILVF
Sbjct: 508 GILTQTDIQKNENLDEVEVKERLELYKKSLPPNIIIDAYLITYLIKHILFKKNAGSILVF 567
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
LPG+ED++ ++ +D K I LHSM+ + Q++VF+ P G +K+IL+TNI
Sbjct: 568 LPGFEDMSMVNKVIVEELITKDNLKITIYMLHSMMQTSDQRRVFQPAPKGHQKVILATNI 627
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
ET++TI+DVVYVIDSGR+K+K Y+ +N +S + +W+S++ AKQRAGRAGR AG CY
Sbjct: 628 VETSVTINDVVYVIDSGRVKQKGYNAFNGISCMNVNWISQSCAKQRAGRAGRLCAGECYR 687
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY++ + + VPEI R+P++ELC+ K++ N + DFL + PP ++++ +A+
Sbjct: 688 LYTREHHSHMASHDVPEILRMPLQELCMLAKVISNNMRVVDFLASAIQPPPTLSVTSALE 747
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ I A+ ++E +T+LG + LS+ +K L FAI + CLDP LT+ R+PF
Sbjct: 748 YLKTIEAMDVNEDLTDLGFFMLDLSIESHYAKSLVFAIFLKCLDPVLTIISCLANREPFN 807
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
L ++ N K + + +LA SD + ++ ++ + + + VS +
Sbjct: 808 LTLNVNMKTSLGSIRKKLAG--DSLSDHIVLLRLYQAFNEGNMVDSDLF----NLVSQSI 861
Query: 868 MNMLLGMRKQL-----QTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRP 922
M ++ R QL ELI+ P D+ + N+ + A L+AGLYP +A+L
Sbjct: 862 MGLITQTRTQLLGQLRALELIQTRAGPNDIRDVNINSNNWAAVKACLLAGLYPNLAKL-- 919
Query: 923 PHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVG 982
N R ++T V H S+ + ++ K ++++E++ + ++NCTVV
Sbjct: 920 DKSNPRPILKTKTEKSVIYHGSSV-LRENYVKDLPSEWIIFEEMSSFNTKKFIKNCTVVS 978
Query: 983 PLPLLLLATEIAV 995
P+ + L ++ + +
Sbjct: 979 PMSVALFSSAMKL 991
>gi|350581003|ref|XP_003123893.3| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like, partial
[Sus scrofa]
Length = 1151
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 326/916 (35%), Positives = 485/916 (52%), Gaps = 135/916 (14%)
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
+ FCTNGVLLR L++ G S L S +TH+IVDE+HERDR+SDF+L +RD
Sbjct: 9 LTFCTNGVLLRTLMA-GDSTL------------STVTHVIVDEVHERDRFSDFLLTKLRD 55
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--------SI 394
+L +P L+LIL SA LD + F +YFG CPVI + G + VK +LED+L +
Sbjct: 56 LLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEM 115
Query: 395 LK-------------------SAESNHLDSAS---LIVPNEDPE--------------LT 418
LK SA+ N S VPN E LT
Sbjct: 116 LKYKKEKQREEKQQSTLTEWYSAQENTFKPESQRQRAVPNVTEEYDLLDDGGDAVFSQLT 175
Query: 419 EENKSTL--------DEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVL 469
E++ + L D +S W + + D ++ L + NV +Y+H+ T T LMV
Sbjct: 176 EKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVA 235
Query: 470 AGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH-----MENALSD 524
AG+G V L+S+GA+ KA +G AL + Q E+ +++ + N
Sbjct: 236 AGRGFSSQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDES 295
Query: 525 SMKQ-----------QLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWED 573
S+ Q +LL Y + + E +DL LI LL IC + GA+L+FLPG+++
Sbjct: 296 SLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDE 355
Query: 574 INKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETA 631
I RDR+L + F +T ++ + LHS + + QKKV K PP G RKIILSTNIAET+
Sbjct: 356 IVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETS 415
Query: 632 ITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ 691
IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+
Sbjct: 416 ITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSR 475
Query: 692 LRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+
Sbjct: 476 LRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLK 535
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPI 810
I A+ E +TELG L L V P + KM+ A+++ CLDP LT+AC YRDPF LP
Sbjct: 536 TIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPT 595
Query: 811 SPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNM 870
++K+ A + + G SD +A++ AF+ W+ A+ G E FC + F+S M +
Sbjct: 596 QASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEI 653
Query: 871 LLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKN 926
++GMR QL +L +GF+ D+ + N+ ++ A L+AG+YP + H +
Sbjct: 654 IIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVD 708
Query: 927 GRRFVETA-GGAKVRLHPHSLNFKLSFKK---------------TDDCPLMVYDEITRGD 970
V T KVR HP S+ + +KK TD ++YDE+TR
Sbjct: 709 RENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTD---WLIYDEMTRAH 765
Query: 971 GGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDDMSDDDADENESDEDCMEIDD 1029
++R C+ V P+ +L+ +A E D + +D +D E++D
Sbjct: 766 RIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRADGIPNDSSDS--------EMED 817
Query: 1030 KTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKAL 1089
+T+ T+ +D WL F + + LR++ L ++ P K
Sbjct: 818 RTTANLA-----------TLKLDEWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPW 866
Query: 1090 PPVLEASMYAMASILS 1105
V EA++ A+ ++LS
Sbjct: 867 SQVDEATIRAIIAVLS 882
>gi|224049015|ref|XP_002189096.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like, partial
[Taeniopygia guttata]
Length = 1074
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 317/928 (34%), Positives = 494/928 (53%), Gaps = 136/928 (14%)
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
+ FCTN +LL L++ +S +TH+IVDE+HERDR+SDF+L +RD
Sbjct: 6 VTFCTNDMLLGTLMA-------------GDSTLSTVTHVIVDEVHERDRFSDFLLIKLRD 52
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--------SI 394
+L + +L+LIL SA LDA+ F +YFG CPVI + G + VK +LED+L +
Sbjct: 53 LLQNQNNLKLILSSAALDANLFIRYFGSCPVIHIQGRPFQVKEMFLEDILRSTGYANKEM 112
Query: 395 LK-------------------SAESNHLDSASL---IVPNEDPE--------------LT 418
+K SA+ N S VP + E LT
Sbjct: 113 VKYKEKKQQEEKQKNTLAEWCSAQDNTNKGTSRRQKSVPRTNEEYKWLDDGGDTVFNQLT 172
Query: 419 EENKSTL--------DEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVL 469
E++ + L D +S W + + D+ +L++L + NV +Y+H+ TG T LM+
Sbjct: 173 EKDVNCLEPWIVKEMDSCLSDIWLHKDIDLFAQLLNLILTENVSVDYRHSETGATALMIS 232
Query: 470 AGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKH------------ 517
+G+G + V L+S+GA K+ +G A+ Q EV +++ +
Sbjct: 233 SGRGFLSQVEQLISMGASIYCKSSNGWMAVDWARHFGQTEVVHLLESYSASFGFGNMDES 292
Query: 518 --MENALSD--SMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWED 573
++ + SD + ++LL Y + + E +DL LI LL IC S+ GAIL+FLPG+++
Sbjct: 293 SLVQKSASDLSAEDRELLTAYHHSFDDEKVDLDLIMHLLHSICHSSDAGAILIFLPGYDE 352
Query: 574 INKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETA 631
I RDR++ + F + ++ + LHS + ++ QKKV + PP G RKIILSTNIAET+
Sbjct: 353 IVSLRDRIVFDDKRFTDNAHRYQVFMLHSSMQTLYQKKVLESPPFGIRKIILSTNIAETS 412
Query: 632 ITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ 691
IT+ DVV+VIDSG++KEKS+D + V+ ++ W+SKASA QR GRAGRCQ G+C+ L+S+
Sbjct: 413 ITVSDVVFVIDSGKVKEKSFDAPSRVTMVKMGWISKASAIQRKGRAGRCQPGVCFRLFSR 472
Query: 692 LRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
LR ++ +FQ PE+ R+P++E+CL K+L P NC I DFL K DPP +VT+RNA+ +L+
Sbjct: 473 LRFQNMLEFQSPELLRMPLQEICLYTKILAPINCPIVDFLMKAPDPPPAVTVRNAVHMLK 532
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPI 810
I A+ E +TELG L L V P + KM+ +A+++ CLDP LT+ACA YRDPF LP
Sbjct: 533 TIDAMDPWEDLTELGYHLTELPVEPHLGKMVLYAVVLKCLDPVLTIACALAYRDPFVLPT 592
Query: 811 SPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNM 870
++K+ A + A+ G SD +A++ AF+ W+ A+ G E FC + F+S M
Sbjct: 593 LASQKRAAVLCRKRFAA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMET 650
Query: 871 LLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKN 926
+ GMR Q+ +L +GF+ D+ + N+ +I L+AG+YP + H +
Sbjct: 651 IAGMRTQVLGQLRASGFVRARGGADIRDVNTNSENWAVIKGALVAGMYPNLV-----HVD 705
Query: 927 GRRFVET-AGGAKVRLHPHSLNFKLSFKK---------------TDDCPLMVYDEITRGD 970
V T + KVR HP S+ + +KK TD ++YDE+TR
Sbjct: 706 RDSLVLTESKEKKVRFHPTSVLGQSQYKKIAPANGQAAAIQALPTD---WLIYDEMTRAH 762
Query: 971 GGMHVRNCTVVGPLPLLLLATEIAV-APAPDNEDDDEDDDMSDDDADENESDEDCMEIDD 1029
++R C+VV P+ + L + + A +S+D +D E++D
Sbjct: 763 KTANIRCCSVVTPVTVALFCGPARLPSNALQTSSSFRGRGVSNDSSDS--------EMED 814
Query: 1030 KTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKAL 1089
KTS + +D WL+ + LR++ L ++ P K
Sbjct: 815 KTSADLA-----------LLKLDEWLHLKLDPEAAGMLLQLRQKWHSLFLRRMRAPSKLW 863
Query: 1090 PPVLEASMYAMASILSY-DGFSGISLPA 1116
V E ++ A+ ++LS + F+G+ P+
Sbjct: 864 SEVDETTVRAITAVLSAEEQFAGLQQPS 891
>gi|196002115|ref|XP_002110925.1| hypothetical protein TRIADDRAFT_54364 [Trichoplax adhaerens]
gi|190586876|gb|EDV26929.1| hypothetical protein TRIADDRAFT_54364 [Trichoplax adhaerens]
Length = 1256
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 298/783 (38%), Positives = 454/783 (57%), Gaps = 72/783 (9%)
Query: 15 KQQQQQSPTVAEATRIRISQILDGFLASKD-EVYTFDANLSNRERAVVHEVCKKMGMTSK 73
++++ Q+P +++ + RIS +++ F+A + F +L ERA +H+ CK +G+ SK
Sbjct: 4 RKRKYQTPNISQELQDRISAVINNFIADHTVQELEFPPSLLKEERAFIHQFCKPLGLISK 63
Query: 74 SSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPD-DGEPGEKL 132
S G G +R ++V +S + K + +LT + SK L DL + +P D G +
Sbjct: 64 SQGWGSERFLTVRRSGNLNDDAK----ITTLTLNGASKKGLTDLISQFPHGLDQYHGSQP 119
Query: 133 DANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISS 192
+ +G ++ IF P++ + + +SL R +LPI
Sbjct: 120 EEAIKSTVYSGQGHKL-IFSSPRIPPHHYSTQ-QSL----------------RHQLPIVH 161
Query: 193 FKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVA 252
+ I + + SN+V+++ GETGCGKTTQ+PQ++LE + G+ C+I+CTQPRR+SA VA
Sbjct: 162 QRSQILAAIQSNKVIIVMGETGCGKTTQIPQYILEDGQATGKPCRIICTQPRRLSAIGVA 221
Query: 253 ERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAK 312
ER++ ERGE IG IGY+IRLESK + +++CT G+LLR L P
Sbjct: 222 ERVAYERGEPIGSTIGYQIRLESKISPDTCLLYCTTGILLRYLTLGA----------PFL 271
Query: 313 DDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCP 372
D +THI+VDE+HERD+ DF+L +R ++ +++LIL SATL++ FSQYF CP
Sbjct: 272 D---CITHIVVDEVHERDKLCDFLLITLRKLIEQESNIKLILSSATLNSKLFSQYFFNCP 328
Query: 373 VIQVPGFTYPVKSFYLEDVL--------------------SILKSAESNH---LDSASLI 409
+++V G TYPV+ YLED+L S+++ E N + +
Sbjct: 329 ILKVDGHTYPVEELYLEDILIRTKYISKLIPKNIKQDTSSSLVQDKELNDNQAVKDKKKL 388
Query: 410 VPNEDPELTEENKSTLDEAISLAW-SNDE--FDMLLELVSLEGSPNVYNYQHTLTGLTPL 466
V N+D + +D + AW ND+ F ++E++ G +V +YQH+ T + L
Sbjct: 389 VENDDGNINA--NQAMDNYLENAWIKNDDNSFRGIIEMIE-NGHIHV-DYQHSETSASSL 444
Query: 467 MVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALS--- 523
M+ AG G++ + LL L A+ LK+ +G TA + N+PE + + + S
Sbjct: 445 MIAAGHGKLATIESLLQLSANVNLKSINGWTARDWALKWNRPEAVEKLDQFSMEKPSVMD 504
Query: 524 -DSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
+ + LL ++ E ID LI ++ IC + GAILVFLPG+EDI +DR+L
Sbjct: 505 VNYNRNSLLKLCTDSIQGEKIDYDLITHIISYICKEDNKGAILVFLPGYEDIVNVKDRIL 564
Query: 583 ANPFFRDTS-KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
F + + K I LHS+V +Q+++FK P +KIILSTNIAET+ITIDDVV VI
Sbjct: 565 QRKFSKHSRLKIRIFILHSLVEITRQREIFKSCPHDVKKIILSTNIAETSITIDDVVDVI 624
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ 701
DSGR+K K++D ++ S+L S+W+SKA+AKQRAGRAGRCQ G CYH+YS+ + SL D+
Sbjct: 625 DSGRIKMKNFDALSSASSLTSAWISKANAKQRAGRAGRCQPGRCYHIYSKSKYNSLSDYL 684
Query: 702 VPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
EI RIP++EL LQVKLL+ N +I +FL ++PP + + NA+ L+ IGAL +E +
Sbjct: 685 RAEILRIPLQELALQVKLLNTNVSIAEFLNDAIEPPSFIAVNNAVECLKAIGALDENENL 744
Query: 762 TEL 764
TEL
Sbjct: 745 TEL 747
>gi|322787531|gb|EFZ13619.1| hypothetical protein SINV_15668 [Solenopsis invicta]
Length = 700
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 290/687 (42%), Positives = 414/687 (60%), Gaps = 81/687 (11%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
++ R LPI + ++ I S + ++QV++I+GETGCGKTTQVPQ++LEH K + C+I+C
Sbjct: 27 VLHFRKSLPIFNAREEILSALSNHQVIIIAGETGCGKTTQVPQYILEHYQQKHQPCRIIC 86
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR+SA SVAER++ ER E IG GY+IRLES+ + + +CTNGVLLR L+ G
Sbjct: 87 TQPRRLSAVSVAERVAFERDEKIGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMG-GD 145
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
S L + LTHIIVDE+HERDR+ DF+L ++D L Y L+LILMSAT+D
Sbjct: 146 SAL------------TTLTHIIVDEVHERDRFCDFLLIALKDALVKYRSLKLILMSATMD 193
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL---------------------KSAE 399
F++YF C VI VPG +Y V ++LEDVL I K+ E
Sbjct: 194 TTIFAKYFNKCVVINVPGRSYDVDVYFLEDVLKITNYMTKEMLVKKKEFLKWKDKQKALE 253
Query: 400 S-----------NHLDSASLI-----------VPNE---DPELTEENKSTLDEAISLAWS 434
S N + SL+ +P + +P L EE +D+++ AW
Sbjct: 254 SWKQYKPQLPTRNTKNEKSLLPSPILAQQNDPIPEKVKLEPWLIEE----MDKSVFDAWV 309
Query: 435 NDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAK 493
N D +L+ S NV +YQH+ T +TPLM A +G + LL+LGA+ ++
Sbjct: 310 NGREDNFAQLLHFILSENVSVDYQHSETSITPLMAAAARGCINTTEQLLNLGANLNSRSA 369
Query: 494 DGRTALQLGEQENQPEVAQIIKKHMEN---ALSD---------SMKQQ---LLDKYLATV 538
+ TAL + N E A++I+ +M+ ALS+ S+ ++ LLD Y T
Sbjct: 370 NDWTALDWAKNRNHTECAELIEAYMKTYDCALSNNELAHVAETSLSEEDKLLLDVYHHTF 429
Query: 539 NPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS-KFVIIP 597
N + ID L+ +L+ + + G+IL+FLPG++DI R+++ + + ++ +
Sbjct: 430 NDDNIDYDLLLELIFHVHLKMPPGSILIFLPGYDDIVTMREKINTDEKKMNQGLRYNLYV 489
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS + + QKKVFK P G RKIILSTNIAET+ITIDDVVYVIDSG++KEKS+D ++V
Sbjct: 490 LHSNMQTCDQKKVFKPSPQGTRKIILSTNIAETSITIDDVVYVIDSGKVKEKSFDAISSV 549
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
TL S+W+S+A AKQR GRAGRC+ GICY L+S +R ++ +Q PEI R+P++ELCL
Sbjct: 550 CTLTSNWISQACAKQRRGRAGRCRRGICYRLFSSIRYENMQAYQTPEILRLPLQELCLYT 609
Query: 718 K-LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
K L N I +FL K L+PP +V RNA+ +L+ I AL E +TELG L L + P
Sbjct: 610 KHLTSGNTPIAEFLDKALEPPSNVVTRNAVQLLKTIDALDPWEDLTELGSHLLDLPIEPR 669
Query: 777 MSKMLFFAILMDCLDPALTLACASDYR 803
+ KML +A+++ CLDP LT+ C+ Y+
Sbjct: 670 LGKMLLYAVVLKCLDPILTIVCSLAYK 696
>gi|327262695|ref|XP_003216159.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Anolis
carolinensis]
Length = 1305
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 304/866 (35%), Positives = 471/866 (54%), Gaps = 142/866 (16%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGE 234
+ + +++ER KLP ++ I ++ +QV+++SG TGCGKTTQ+PQF+L+ +
Sbjct: 453 HYQALLQERQKLPAWEKRETILRLLNKHQVLVVSGMTGCGKTTQIPQFILDSSLEGPSSQ 512
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR
Sbjct: 513 LANIICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVMSSATRLLYCTTGVLLR- 571
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
RL+ N + TH+I+DE+HER SDF++ +++D++ P LR+IL
Sbjct: 572 -------RLEGDLN------LQGFTHVIIDEVHERTEESDFLMLVLKDIMIQRPDLRIIL 618
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNED 414
MSATL+AD FSQYF CPV+ +PG T+PV F+LED +++ + ++ +
Sbjct: 619 MSATLNADLFSQYFNSCPVVNIPGRTFPVDQFFLEDAIAVTR-----------YVLEHGS 667
Query: 415 PELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGR 474
P + + +A L + +E + L AG G+
Sbjct: 668 PYMRNTKQGPGKKARHLRTAAEEVEEDLR-------------------------RAGLGQ 702
Query: 475 VGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKY 534
+ + AKD QL Q+ I K + ++ +M LDK
Sbjct: 703 I-------------TVTAKDSVPDQQLTVQQ-----LMIRYKGISTSVLKTMATMDLDK- 743
Query: 535 LATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RD 589
VN E LIE LL I GA+LVFLPG +I +L +N F R
Sbjct: 744 ---VNLE-----LIEALLEWIVSGKHSYPPGAVLVFLPGLAEIKALYKQLQSNALFNNRH 795
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
+ + V+ PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK
Sbjct: 796 SRRCVVYPLHSSLSSAEQQAVFLKPPAGVVKIIISTNIAETSITIDDVVYVIDSGKMKEK 855
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRI 708
YDP + +L+ +VSKA+A QR GRAGR +G+C+HL+S L Q+PEI+R+
Sbjct: 856 RYDPSKGMESLEDMFVSKANALQRKGRAGRVASGVCFHLFSSHHYNHHLLKQQLPEIQRV 915
Query: 709 PIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766
P+E+LCL++K+L+ + ++ L + ++PP S ++R + + LQD+GAL+ DEK+T LG
Sbjct: 916 PLEQLCLRIKILEMFSSYSLHSVLSQLIEPPTSDSLRASKVRLQDVGALTSDEKLTPLGY 975
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L V + K++ F + CLDPALT+A + Y+ PF P ++++ A K E A
Sbjct: 976 HLASLPVDVRIGKLILFGTIFRCLDPALTIAASRAYKSPFLSPW--DKREEAFKKKMEFA 1033
Query: 827 SLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD LA++ A++ W+ ++K+ Q A+ FC + F+S V+ + +++Q TEL+
Sbjct: 1034 I---GNSDYLALLQAYKGWQLSSKESSQAAYSFCRESFLSENVLQEMASLKRQF-TELLS 1089
Query: 885 N-GFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVARLRP 922
+ GF+ E + + + NA +I A+L A LYP V +++
Sbjct: 1090 DIGFVKEGLRARDIERRWSQGGDGILEATGEEANANADNVKLISAMLCAALYPNVVQVKV 1149
Query: 923 PHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYD 964
P ++ +T+ GA V +HP S+N++ + D P +VY
Sbjct: 1150 PEG---KYQKTSTGAVKMNPKPGELKFVTKKEGNVYIHPSSVNYQ---TRHFDSPYLVYH 1203
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLA 990
E+ + + +R+C++V PL+L
Sbjct: 1204 EMVK-TSRVFIRDCSMVSVYPLILFG 1228
>gi|57098573|ref|XP_540155.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform 1 [Canis
lupus familiaris]
Length = 1382
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 302/870 (34%), Positives = 471/870 (54%), Gaps = 149/870 (17%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GE 234
+ I++ER LP ++ I + +QV++ISG TGCGKTTQ+PQF+L+ S +
Sbjct: 529 QFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEK 588
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR
Sbjct: 589 VANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 648
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G + L+ +THIIVDE+HER SDF+L +++D++ P+L++IL
Sbjct: 649 L--EGDTSLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVIL 694
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNED 414
MSATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 695 MSATLNAELFSEYFSSCPVITIPGRTFPVDQFFLEDAIAVTR------------------ 736
Query: 415 PELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGR 474
V +GSP Y ++ +T + A + R
Sbjct: 737 -----------------------------YVLQDGSP----YMRSMKQMTKEKLKARRSR 763
Query: 475 VG----DVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQL 530
+ + LSL Q KD QL + Q++ ++ +S S+ + +
Sbjct: 764 TAFEEVEEDLRLSLHLQHQDSVKDAVPDQQL-------DFKQLLARY--KGVSKSVIKTM 814
Query: 531 LDKYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPF 586
VN ELI+ +L + +D + GAILVFLPG +I ++L +N
Sbjct: 815 SIMDFEKVNLELIEALL------EWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSL 868
Query: 587 F--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSG 644
F R + + V+ PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG
Sbjct: 869 FNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSG 928
Query: 645 RMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVP 703
+MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+P
Sbjct: 929 KMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLP 988
Query: 704 EIKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
EI+R+P+E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+
Sbjct: 989 EIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKL 1048
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T LG L L V + K++ F + CLDPALT+A + ++ PF P ++K+ A
Sbjct: 1049 TPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQK 1106
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQ 879
K E A SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q
Sbjct: 1107 KLEFAF---ANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQF- 1162
Query: 880 TELIKN-GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVA 918
TEL+ + GF+ E + + + NA P +I A+L A LYP V
Sbjct: 1163 TELLSDIGFVKEGLRAREIEKRAQGGDGILDATGEEANSNAENPKLISAMLCAALYPNVV 1222
Query: 919 RLRPPHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPL 960
+++ P +F +T+ GA V +HP S+N+++ + D P
Sbjct: 1223 QVKSPEG---KFQKTSTGAVRMQPKSDELKFVTKNDGYVHIHPSSVNYQV---RHFDSPY 1276
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+VY E + + +R+C++V PL+L
Sbjct: 1277 LVYHEKIK-TSRVFIRDCSMVSVYPLVLFG 1305
>gi|390366519|ref|XP_783600.3| PREDICTED: probable ATP-dependent RNA helicase YTHDC2
[Strongylocentrotus purpuratus]
Length = 1436
Score = 458 bits (1178), Expect = e-125, Method: Compositional matrix adjust.
Identities = 277/727 (38%), Positives = 406/727 (55%), Gaps = 74/727 (10%)
Query: 425 LDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLS 483
+D AIS W + D +L+ L + NV +Y H+ + +TPLMV AG+G+V V LLS
Sbjct: 500 MDSAISDCWKTGDNDYFSQLLYLLLNENVSVDYAHSESSVTPLMVGAGRGKVEMVEQLLS 559
Query: 484 LGADCQLKAKDGRTALQLGEQENQPEV------------------AQIIKKHMENALSDS 525
LGA+ LKA D RTAL NQ EV +++++ H+E + D
Sbjct: 560 LGANASLKASDERTALDFARMFNQTEVVDLLQAYLDTVQASNEDESELLRNHIEVSTED- 618
Query: 526 MKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP 585
++LL Y + + E +DL L+ LL IC S++GAILVFLPG++DI RD LL +
Sbjct: 619 --RELLQAYHHSFDDERVDLNLVLALLDYICSHSQEGAILVFLPGYDDIVSLRDMLLQDD 676
Query: 586 FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
F D F I LHS + S QKKVFK P G RKI+LSTNIAET++TI+DVV+V+DSG+
Sbjct: 677 TFSDRQSFQIYTLHSSMQSHDQKKVFKTPGAGIRKIVLSTNIAETSVTINDVVFVVDSGK 736
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEI 705
+KEKS+D N+S+L+S+W+SKASAKQR GRAGR + G+C+H+ S++R SLPDFQVPEI
Sbjct: 737 VKEKSFDAIANISSLKSNWISKASAKQRRGRAGRVRPGMCFHMISRVRFQSLPDFQVPEI 796
Query: 706 KRIPIEELCLQVKLLDPN-CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R P+ ELCL KLL PN +I DFL++ +PP ++ I+NAI +L+ I A+ E +TEL
Sbjct: 797 LRTPLHELCLHTKLLAPNETSIGDFLKRAPEPPSTIAIKNAIGLLKSIDAMDKWEDLTEL 856
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V P + KM+ +AI++ CLDP LT+ CA Y+DPF LP P++K+ A + +
Sbjct: 857 GCHLADLPVDPRLGKMVLYAIVLKCLDPVLTIVCALAYKDPFVLPSHPSQKRAAMQVRKK 916
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
S SD +A++ AF+ W+ A+ G E FC + F+S M M++GMR QL +L
Sbjct: 917 YTS--NTFSDHMALLRAFQSWQRARSDGWEGTFCDRNFLSRATMEMIVGMRTQLLGQLRA 974
Query: 885 NGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR 940
+GF+ P D+ + N+ ++ A L AG+YP + ++ RR + T +KVR
Sbjct: 975 SGFVRARGPGDIRDLNTNSENWAVVKASLCAGMYPNILKV----DRERRQLTTKTESKVR 1030
Query: 941 LHPHSLNFKLSFKKT----------DDCP--LMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
HP+S+ +++ KT D P ++YDE+T VR T++ P+ + L
Sbjct: 1031 FHPNSVLHEVTKGKTSLSEEHMRTVDSLPSDWLLYDELTSSHFRTSVRCVTLISPITIAL 1090
Query: 989 LATEIAVAPA---------PDNEDDDEDDDMS-DDDADENESDEDCMEIDDKTSGQHGEN 1038
+ PA P+ M + DA N+S E E DD +
Sbjct: 1091 VC-----GPARLPYDALVLPEGTASSMATRMGPNGDAAANDSSEG--EDDDYRVAK---- 1139
Query: 1039 VMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMY 1098
T+ +D WL S + + + LR + + ++ P K EA +
Sbjct: 1140 --------ATLKLDEWLVIKSESQAASLVLQLRTKWHTLFMRRMRTPAKPWSQADEAVLK 1191
Query: 1099 AMASILS 1105
+ +L+
Sbjct: 1192 TLIKVLT 1198
Score = 248 bits (633), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 212/380 (55%), Gaps = 40/380 (10%)
Query: 24 VAEATRIRISQILDGFLASKDE-VYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRR 82
V E +I + + F + E V F A+ SN ERA +H + G+ SKS G+G R
Sbjct: 18 VGEEFKISVDLAIQEFRHDESETVLEFPASFSNNERAYIHRLAISCGLKSKSKGKGSNRY 77
Query: 83 VSVCK-SKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSD 141
+++ K S R++ D + P + LQ L +P E E + R+
Sbjct: 78 LTLIKKSVNRMDDDGEDDGSPVFQMGAATCNELQGLLQQFPVTAKERQELQPKVERRRFG 137
Query: 142 KTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK---------LPISS 192
S+A A ++ T R+ +++L Q+ +R+K LP+ +
Sbjct: 138 P--------------SEANPAREMNKATGRL--NSSLPQVPSKRNKSDLDSFRQTLPVFA 181
Query: 193 FKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVA 252
++ I ST+++N+VVLI GETG GKTTQ+PQF+L+ + C+I+CTQPRRISA SV+
Sbjct: 182 MQNEILSTINNNKVVLIVGETGSGKTTQLPQFILDECFEMNRPCRIICTQPRRISALSVS 241
Query: 253 ERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAK 312
ER++ ERGE IG +GY+IRLES+ + + +CTNGVLLR L++ +
Sbjct: 242 ERVASERGEAIGQTVGYQIRLESRVSPKTLLTYCTNGVLLRTLMTGDAA----------- 290
Query: 313 DDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCP 372
+ +TH+I+DEIHERDR+SDF++ IRD++ HL LILMSA LD F +YF CP
Sbjct: 291 --LDVITHVIIDEIHERDRFSDFLVTQIRDLMVRKRHLTLILMSAALDVQLFIRYFNNCP 348
Query: 373 VIQVPGFTYPVKSFYLEDVL 392
V+ VPG Y V+ +LED L
Sbjct: 349 VVSVPGNMYDVEELFLEDAL 368
>gi|302794426|ref|XP_002978977.1| hypothetical protein SELMODRAFT_177444 [Selaginella moellendorffii]
gi|300153295|gb|EFJ19934.1| hypothetical protein SELMODRAFT_177444 [Selaginella moellendorffii]
Length = 1426
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 309/919 (33%), Positives = 477/919 (51%), Gaps = 156/919 (16%)
Query: 140 SDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIE-------KDANLRQIVEERSKLPISS 192
S + G++V + ++ A + ++++S ++ KD + ++ R LPI+S
Sbjct: 534 SARVSGRQVSPCYQEDLANARVLADHDAVSSHLKLIQERKLKDKKYQAMLSARHSLPIAS 593
Query: 193 FKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATS 250
K+ I + ++ V+++SGETG GKTTQVPQ++L+ + + G +CKI+CTQPRRI+A S
Sbjct: 594 VKETILQHLVTSNVLVVSGETGSGKTTQVPQYILDDMIAAGHGSSCKIICTQPRRIAAIS 653
Query: 251 VAERISVERGE----NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEA 306
V+ER++ ER E G +GY++RL++ + + FCT G+LLR L S
Sbjct: 654 VSERVASERCEAGPGEAGSTVGYQVRLDASWTDDTRLFFCTTGILLRRLASD-------- 705
Query: 307 SNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-----LRLILMSATLDA 361
D+ ++H++VDE+HER DF+++++RD++ L++ILMSATLDA
Sbjct: 706 ------PDLCDVSHVVVDEVHERTVLGDFLISLLRDLVAKRNEDKMNPLKVILMSATLDA 759
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPE----L 417
DRFSQYFGGCPV+ G TYPV++FYLED+ L+ S+ +A + D +
Sbjct: 760 DRFSQYFGGCPVVVATGRTYPVQTFYLEDIYEQLEYRLSSDNPAALQNYSSHDKRASQNV 819
Query: 418 TEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGD 477
++N+ D A + W +D+ LE P + PL
Sbjct: 820 VDKNRGRQDLA-RMGWGDDQI--------LESRP-----------VNPLY---------- 849
Query: 478 VCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLAT 537
E+ + ++ +K++ N D + +LL+ +
Sbjct: 850 -------------------------EESLYRKYSENTRKNLANVNEDVIDYELLEDLIMH 884
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
+N + GA+LVFLPG +I + DRL+ F + ++P
Sbjct: 885 INE-----------------TGDPGALLVFLPGMPEILQLLDRLMVLKTFSGPAAEWLLP 927
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS V Q+KVF+ PP G RKI+L+TNIAET++TI+DVV+VID G+ KE ++P +
Sbjct: 928 LHSSVAPADQRKVFQVPPRGIRKIVLATNIAETSVTIEDVVHVIDCGKHKENRFEPRRRM 987
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD-FQVPEIKRIPIEELCLQ 716
S + +W+S+A+A+QR GRAGR +AG CY Y++ R L FQ+PE+ R+P+ ELCLQ
Sbjct: 988 SRMMEAWISQANARQRRGRAGRVKAGNCYCFYTESRFDKLMRPFQLPEMLRVPLVELCLQ 1047
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
+KLL N+ FL+K LDPP + + +A+ +L+++GAL+ +E +T LG L L V
Sbjct: 1048 IKLLSVE-NVASFLEKALDPPKTEAVESALSILREVGALTEEEYLTPLGSHLAALPVDVH 1106
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR--------ATAAKFELASL 828
+ KML + L+ CL P LT+A ++ PF P+ + + A K +AS
Sbjct: 1107 IGKMLLYGALLGCLSPVLTIAAYLSHKSPFVAPLGQRDAAERAKHAFGDSAAEKSTIAS- 1165
Query: 829 YGGQSDQLAVIAAFECWKN-AKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G QSD L ++AA+E W+ Q G A FC F+S V+NML MR Q L
Sbjct: 1166 -GRQSDHLVIVAAYENWRRLVTQGGARAARQFCDASFLSMPVLNMLREMRLQFAKLLKDI 1224
Query: 886 GFIPE------DVSSC--------SHNARVPGIIHAVLMAGLYPMVARL-----RPPHKN 926
GFI + D+ C + NA+ +I AVL AGLYP VA + + H N
Sbjct: 1225 GFISKGDNRAADIDKCLDEINQPFNQNAQSASVIKAVLCAGLYPNVATMMEESVKAGHAN 1284
Query: 927 G----------RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVR 976
+ T G +V +HP S+N K+ K P +V+ E +++R
Sbjct: 1285 ALNQRAGLASEKNPRWTDGRREVYVHPSSINSKV---KEFQHPFLVFHEKVE-TSRVYLR 1340
Query: 977 NCTVVGPLPLLLLATEIAV 995
+ TV+ P LLL I V
Sbjct: 1341 DTTVLSPFALLLFGGSIKV 1359
>gi|302824717|ref|XP_002993999.1| hypothetical protein SELMODRAFT_187668 [Selaginella moellendorffii]
gi|300138161|gb|EFJ04939.1| hypothetical protein SELMODRAFT_187668 [Selaginella moellendorffii]
Length = 1422
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 309/900 (34%), Positives = 466/900 (51%), Gaps = 170/900 (18%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
KD + ++ R LPI+S K+ I + ++ V+++SGETG GKTTQVPQ++L+ + + G
Sbjct: 567 KDKKYQAMLSARHSLPIASVKETILQHLITSNVLVVSGETGSGKTTQVPQYILDDMIAAG 626
Query: 234 E--TCKIVCTQPRRISATSVAERISVERGE----NIGDNIGYKIRLESKGGKHSSIVFCT 287
+ +CKI+CTQPRRI+A SV+ER++ ER E G +GY++RL++ + + FCT
Sbjct: 627 QGSSCKIICTQPRRIAAISVSERVASERCEAGPGEAGSTVGYQVRLDASWTDDTRLFFCT 686
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S D+ ++H++VDE+HER DF+++++RD++
Sbjct: 687 TGILLRRLASD--------------PDLCDVSHVVVDEVHERTVLGDFLISLLRDLVAKR 732
Query: 348 PH-----LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
L++ILMSATLDADRFSQYFGGCPV+ G TYPV++FYLED+ L+ S+
Sbjct: 733 NEDKMNPLKVILMSATLDADRFSQYFGGCPVVVATGRTYPVQTFYLEDIYEKLEYRLSSD 792
Query: 403 LDSASLIVPNEDPE----LTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQH 458
+A + D + ++N+ D A + W +D+ LE P
Sbjct: 793 NPAALQNYSSHDKRASQNVVDKNRGRQDLA-RMGWGDDQI--------LESRP------- 836
Query: 459 TLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHM 518
+ PL E+ + + ++ +K++
Sbjct: 837 ----VNPLY-----------------------------------EESHYRKYSENTRKNL 857
Query: 519 ENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTR 578
N D + +LL E L+ I + GA+LVFLPG +I +
Sbjct: 858 ANVNEDVIDYELL-----------------EDLIMHINETGDPGALLVFLPGMPEILQLL 900
Query: 579 DRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
DRL+ F + ++PLHS V Q+KVF+ PP G RKI+L+TNIAET++TI+DVV
Sbjct: 901 DRLMVLKTFSGPAAEWLLPLHSSVAPADQRKVFQVPPRGIRKIVLATNIAETSVTIEDVV 960
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASL 697
+VID G+ KE ++P +S + +W+S+A+A+QR GRAGR +AG CY Y++ R +
Sbjct: 961 HVIDCGKHKENRFEPRRRMSRMMEAWISQANARQRRGRAGRVKAGNCYCFYTENRFDKHM 1020
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL 757
FQ+PE+ R+P+ ELCLQ+KLL N+ FL+K LDPP + + +A+ +L+++GAL+
Sbjct: 1021 RPFQLPEMLRVPLVELCLQIKLLSVE-NVASFLEKALDPPKTEAVESALSILREVGALTE 1079
Query: 758 DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNE-KK 816
+E +T LG L L V + KML + L+ CL P LT+A ++ PF P+ + +
Sbjct: 1080 EEYLTPLGSHLAALPVDVHIGKMLLYGALLGCLSPVLTIAAYLSHKSPFVAPLGQRDAAE 1139
Query: 817 RA-------TAAKFELASLYGGQSDQLAVIAAFECWKN-AKQRGQEA--WFCSQYFVSSG 866
RA A K +AS G QSD L ++AA+E W+ Q G A FC F+S
Sbjct: 1140 RAKHAFGDTAAEKSTIAS--GRQSDHLVIVAAYENWRRLVTQGGARAARQFCDASFLSMP 1197
Query: 867 VMNMLLGMRKQLQTELIKNGFIPE------DVSSC--------SHNARVPGIIHAVLMAG 912
V+NML MR Q L GFI + D+ C + NA+ +I AVL AG
Sbjct: 1198 VLNMLREMRLQFAKLLRDIGFISKVDYRAADIDKCLDEINQPFNQNAQSASVIKAVLCAG 1257
Query: 913 LYPMVARL-----RPPHKNG----------RRFVETAGGAKVRLHPHSLNFKLSFKKTDD 957
LYP VA + + H N + T G +V +HP S+N K+ K
Sbjct: 1258 LYPNVATMMEESVKAGHANALNQRAGLASEKNPRWTDGRREVYVHPSSINSKV---KEFQ 1314
Query: 958 CPLMVYDE-------------ITRG---------DGGMHVRNCTVVGPLPLLLLATEIAV 995
P +V+ E +TR +++R+ TV+ P LLL I V
Sbjct: 1315 HPFLVFHEKASPSLFYLSNFSVTRSRIASSLQVETSRVYLRDTTVLSPFALLLFGGSIKV 1374
>gi|12321257|gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thaliana]
Length = 1453
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 306/876 (34%), Positives = 454/876 (51%), Gaps = 156/876 (17%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TC 236
+ +++ R+ LPIS K+ I + V+++ GETG GKTTQVPQF+L+ + G C
Sbjct: 605 KDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYC 664
Query: 237 KIVCTQPRRISATSVAERISVERGEN---IGDN-IGYKIRLESKGGKHSSIVFCTNGVLL 292
I+CTQPRRI+A SVA+R++ ER E+ + D+ +GY++RLES + ++FCT G+LL
Sbjct: 665 NIICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILL 724
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP------S 346
R L A ++ D +THIIVDE+HER DF+L I++ ++ +
Sbjct: 725 RKL----------AGDRTLND----VTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNT 770
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSA 406
L++ILMSAT+DAD FS+YFG CPVI G T+PV + +LE++ +S
Sbjct: 771 SRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEI-----------YESI 819
Query: 407 SLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPL 466
+ ++ + P + S D+ L ND G N
Sbjct: 820 NYLLAPDSPAALRSDTSIKDK---LGSVNDR----------RGKKN-------------- 852
Query: 467 MVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSM 526
+VLAG G D L ++D + N + SD
Sbjct: 853 LVLAGWG-------------DDYLLSEDCLNPFYVSSNYN--------------SYSDQT 885
Query: 527 KQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF 586
+Q L +N + ID L+E+L+ I E+GAIL+FLPG +I D L A+
Sbjct: 886 QQNL-----KRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYR 940
Query: 587 FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
FR + ++PLHS + S +Q+KVF RPP G RK+I +TNIAET+ITIDDVVYVIDSG+
Sbjct: 941 FRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKH 1000
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD-FQVPEI 705
KE Y+P +S++ W+S+A+A+QR GRAGR + GIC+ LY++ R L +QVPE+
Sbjct: 1001 KENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEM 1060
Query: 706 KRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELG 765
R+P+ ELCLQ+KLL +I+ FL + L+PP + +AI +L ++GA+ DE++T LG
Sbjct: 1061 LRMPLVELCLQIKLLGLG-HIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLG 1119
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
L L V L+ KML + + CL P L++A Y+ PF P +EK+ K L
Sbjct: 1120 HHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYP--KDEKQNVDRVKLAL 1177
Query: 826 ASLYG----------GQSDQLAVIAAFECW-KNAKQRGQEAW--FCSQYFVSSGVMNMLL 872
S G QSD L ++ A++ W K ++RG +A FC F+SS VM M+
Sbjct: 1178 LSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIR 1237
Query: 873 GMRKQLQTELIKNGFI--------------PEDVSSCSHNARVPGIIHAVLMAGLYPMVA 918
MR Q T L G I + + ++ P ++ A+L AGLYP +A
Sbjct: 1238 DMRVQFGTLLADIGLINLPKTGEENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIA 1297
Query: 919 RLRPPHKNGRRFVETA-------------------GGAKVRLHPHSLNFKLSFKKTDDCP 959
N + ET G +V +HP S+N +FK + P
Sbjct: 1298 ------ANDKGITETTFNSLTKQGNQTKSYSAWYDGRREVHIHPSSINS--NFKAFQN-P 1348
Query: 960 LMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+V+ E + +++R+ T+V P +LL I V
Sbjct: 1349 FLVFLEKVETN-KVYLRDTTIVSPFSILLFGGSINV 1383
>gi|30696202|ref|NP_176103.2| helicase associated domain-containing protein [Arabidopsis thaliana]
gi|332195372|gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana]
Length = 1459
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 306/882 (34%), Positives = 454/882 (51%), Gaps = 162/882 (18%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TC 236
+ +++ R+ LPIS K+ I + V+++ GETG GKTTQVPQF+L+ + G C
Sbjct: 605 KDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYC 664
Query: 237 KIVCTQPRRISATSVAERISVERGEN---IGDN-IGYKIRLESKGGKHSSIVFCTNGVLL 292
I+CTQPRRI+A SVA+R++ ER E+ + D+ +GY++RLES + ++FCT G+LL
Sbjct: 665 NIICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILL 724
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP------S 346
R L A ++ D +THIIVDE+HER DF+L I++ ++ +
Sbjct: 725 RKL----------AGDRTLND----VTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNT 770
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSA 406
L++ILMSAT+DAD FS+YFG CPVI G T+PV + +LE++ +S
Sbjct: 771 SRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEI-----------YESI 819
Query: 407 SLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPL 466
+ ++ + P + S D+ L ND G N
Sbjct: 820 NYLLAPDSPAALRSDTSIKDK---LGSVNDR----------RGKKN-------------- 852
Query: 467 MVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSM 526
+VLAG G D L ++D + N + SD
Sbjct: 853 LVLAGWG-------------DDYLLSEDCLNPFYVSSNYN--------------SYSDQT 885
Query: 527 KQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF 586
+Q L +N + ID L+E+L+ I E+GAIL+FLPG +I D L A+
Sbjct: 886 QQNL-----KRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYR 940
Query: 587 FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
FR + ++PLHS + S +Q+KVF RPP G RK+I +TNIAET+ITIDDVVYVIDSG+
Sbjct: 941 FRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKH 1000
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEI 705
KE Y+P +S++ W+S+A+A+QR GRAGR + GIC+ LY++ R L +QVPE+
Sbjct: 1001 KENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEM 1060
Query: 706 KRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELG 765
R+P+ ELCLQ+KLL +I+ FL + L+PP + +AI +L ++GA+ DE++T LG
Sbjct: 1061 LRMPLVELCLQIKLLGLG-HIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLG 1119
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
L L V L+ KML + + CL P L++A Y+ PF P +EK+ K L
Sbjct: 1120 HHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYP--KDEKQNVDRVKLAL 1177
Query: 826 ASLYG----------GQSDQLAVIAAFECW-KNAKQRGQEAW--FCSQYFVSSGVMNMLL 872
S G QSD L ++ A++ W K ++RG +A FC F+SS VM M+
Sbjct: 1178 LSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIR 1237
Query: 873 GMRKQLQTELIKNGFI--------------------PEDVSSCSHNARVPGIIHAVLMAG 912
MR Q T L G I + + ++ P ++ A+L AG
Sbjct: 1238 DMRVQFGTLLADIGLINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAG 1297
Query: 913 LYPMVARLRPPHKNGRRFVETA-------------------GGAKVRLHPHSLNFKLSFK 953
LYP +A N + ET G +V +HP S+N +FK
Sbjct: 1298 LYPNIA------ANDKGITETTFNSLTKQGNQTKSYSAWYDGRREVHIHPSSINS--NFK 1349
Query: 954 KTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+ P +V+ E + +++R+ T+V P +LL I V
Sbjct: 1350 AFQN-PFLVFLEKVETN-KVYLRDTTIVSPFSILLFGGSINV 1389
>gi|351715510|gb|EHB18429.1| Putative ATP-dependent RNA helicase DHX57 [Heterocephalus glaber]
Length = 1385
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 298/899 (33%), Positives = 473/899 (52%), Gaps = 170/899 (18%)
Query: 162 AMKVESLTSRIEKDANLRQ-------IVEERSKLPISSFKDVITSTVDSNQVVLISGETG 214
A V + S+I + ++Q +++ER LP ++ I + +QVV+ISG TG
Sbjct: 510 AKSVHAENSKICRQFQMKQASRQFQSVLQERQSLPAWEERETILKLLSKHQVVVISGMTG 569
Query: 215 CGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
CGKTTQ+PQF+L+ S + I+CTQPRRISA SVAER++ ER E +G +GY+IR
Sbjct: 570 CGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAVSVAERVAKERAERVGLTVGYQIR 629
Query: 273 LESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
LES + +++CT GVLLR L +G + L+ +TH+IVDE+HER
Sbjct: 630 LESVKSSATRLLYCTTGVLLRRL--EGDTALQ------------GVTHVIVDEVHERTEE 675
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SDF+L +++D++ P L++ILMSATL+A+ FS+YF C P T P +F ++
Sbjct: 676 SDFLLLVLKDIVAQNPSLQVILMSATLNAELFSEYFNSC-----PVITIPGCTFPVDQFF 730
Query: 393 SILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPN 452
L++AI++ V EGSP
Sbjct: 731 --------------------------------LEDAIAVT----------RYVLHEGSPY 748
Query: 453 VYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQ 512
V + + A +LKA+ RTA + E++ + +
Sbjct: 749 VRSMKQI--------------------------AKEKLKARRNRTAFEEVEEDLRLSLHL 782
Query: 513 IIKKHMENALSDSMK--QQLLDKY----------LATVNPELIDLVLIEQLLRKICMDSE 560
+ ++A+ D +QLL +Y ++ ++ E ++L LIE LL I
Sbjct: 783 QDQDSAKDAVPDQQLDFKQLLVRYKGISKSVIKTMSIMDFEKVNLELIEALLEWIVDGKH 842
Query: 561 D---GAILVFLPGWEDINKTRDRLLANPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
GAILVFLPG +I ++L +N F R +++ +I PLHS + S +Q+ VF +PP
Sbjct: 843 SYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCIIHPLHSSLSSEEQQAVFIKPP 902
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAG 675
G KII+STNIAET+ITIDDVVYVIDSG+MKEK YD + +L+ ++VS+A+A QR G
Sbjct: 903 VGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKG 962
Query: 676 RAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPIEELCLQVKLLD--PNCNIEDFLQK 732
RAGR +G+C+HL+ S L Q+PEI+R+P+E+LCL++K+LD + +++ +
Sbjct: 963 RAGRVASGVCFHLFTSHHYTHQLLKQQLPEIQRVPLEQLCLRIKILDMFSSHSLQSVFSR 1022
Query: 733 TLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDP 792
++PP + ++R + I L+D+GAL+ DEK+T LG L L V + K++ F + CLDP
Sbjct: 1023 LIEPPHADSLRLSKIRLRDLGALTQDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDP 1082
Query: 793 ALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG 852
ALT+A + ++ PF P E+ +F A+ SD LA++ A++ W+ + + G
Sbjct: 1083 ALTIAASLAFKSPFVSPWDVKEEANQKKLEFAFAN-----SDYLALLRAYKGWQLSTREG 1137
Query: 853 QEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN-GFIPEDVSS--------------- 894
A +C Q F+S ++ + +++Q TEL+ + GF E + +
Sbjct: 1138 MHASYNYCRQNFLSGRILQEIASLKRQF-TELLSDIGFAKEGLRAREIEKRAQGGDGVLD 1196
Query: 895 -----CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA------------ 937
+ N P +I A+L A LYP V +++ P +F +T+ GA
Sbjct: 1197 ATGEEANSNGENPKLISAMLCAALYPNVVQVKTPEG---KFQKTSTGAVRMQPKSTELKF 1253
Query: 938 ------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
V +HP S+N+++ + D P ++Y E + + +R+C++V PL+L
Sbjct: 1254 VTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKIK-TSRVFIRDCSMVSVYPLVLFG 1308
>gi|410919035|ref|XP_003972990.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Takifugu
rubripes]
Length = 1420
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 291/867 (33%), Positives = 457/867 (52%), Gaps = 148/867 (17%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
++E+R KLP + I ++ +QV++++G TGCGKTTQ+PQF+L+ G+ I
Sbjct: 568 MLEQRRKLPAWQESENILRVLEQSQVLVVTGMTGCGKTTQIPQFILDASLKGPAGQVANI 627
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVA+R++ ER E +G+++GY+IRLES + +++CT GVLLR L
Sbjct: 628 ICTQPRRISAISVAQRVAQERAEQLGNSVGYQIRLESVRSPATRLLYCTTGVLLRRLEGD 687
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
++ +TH+IVDE+HER SDF+L +++D++ L++ILMSAT
Sbjct: 688 A--------------ELGGVTHVIVDEVHERTEESDFLLLVLKDLVVQRSDLKIILMSAT 733
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELT 418
L+A FS YF CP I + P ++F ++
Sbjct: 734 LNAHLFSDYFYNCPSIHI-----PGRTFPVDQFF-------------------------- 762
Query: 419 EENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDV 478
L++AI+ + + +LE +GSP + +G + +G+G G
Sbjct: 763 ------LEDAIA------KTNYVLE----DGSP------YMRSGKPAVSSTSGRGTTGAR 800
Query: 479 CMLLSLGAD-------CQLK-AKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQL 530
++ LG D C KD QL QE + D+ K L
Sbjct: 801 EVVEDLGDDLWNFMSFCNKDFVKDSIPDKQLSLQE------------LTLRYKDTKKSVL 848
Query: 531 LDKYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF 587
K +A ++ + I++ L+E LL I D GA+LVFLPG +I ++L++N F
Sbjct: 849 --KTIAAMDLDKINMDLVENLLEWIVDGKHDYPPGAVLVFLPGLAEIKMLYEQLMSNRMF 906
Query: 588 --RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
R + + + PLHS + + +Q+ VF PP G KII+STNIAET++TIDDVVYVIDSG+
Sbjct: 907 NNRGSKRCAVYPLHSTLSNEEQQAVFSCPPEGVTKIIISTNIAETSVTIDDVVYVIDSGK 966
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPE 704
MKEK YD ++ +L+ +WVS+A+A QR GRAGR +G+C+HL+ S L + Q+PE
Sbjct: 967 MKEKRYDATKSMESLEDTWVSRANALQRKGRAGRVASGVCFHLFTSHCFQHHLAEQQLPE 1026
Query: 705 IKRIPIEELCLQVKLLDPNCN--IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
I+R+P+E+LCL++K+LD +E + ++PP + ++ A LQD+GAL+ DEK+T
Sbjct: 1027 IQRVPLEQLCLRIKILDVFSEQMLESVFSRLIEPPATESLDAAEQRLQDLGALTADEKLT 1086
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
LG L CL V + K++ F + CLDPALT+A + ++ PF P E+
Sbjct: 1087 PLGYHLACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLA 1146
Query: 823 FELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF--CSQYFVSSGVMNMLLGMRKQLQT 880
F LA+ SD LA++ A++ W +A + G +A F C + F+S + + +++Q
Sbjct: 1147 FALAN-----SDHLALLQAYKGWCSAARNGYQAGFRYCRENFLSWRGLQEIASLKRQFAE 1201
Query: 881 ELIKNGFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVAR 919
L GFI E + + + N+ ++ A+L A LYP V +
Sbjct: 1202 LLSDIGFIKEGLRARVIERLGSKGSDGVLEATGPEANLNSDNIRLMSAMLCAALYPNVVQ 1261
Query: 920 LRPPHKNGR----------------RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVY 963
+R P +N + RFV G V +HP S+N+ + + + P +VY
Sbjct: 1262 VRAPQENYKMTSKGAMKMHPKANELRFVTKNDGC-VHVHPSSVNYTV---RHYNSPYLVY 1317
Query: 964 DEITRGDGGMHVRNCTVVGPLPLLLLA 990
E + + +R+C++V PL+LL
Sbjct: 1318 HEKVK-TSRVFIRDCSMVSVYPLVLLG 1343
>gi|345491450|ref|XP_003426609.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like isoform 2
[Nasonia vitripennis]
Length = 1271
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 307/901 (34%), Positives = 456/901 (50%), Gaps = 139/901 (15%)
Query: 133 DANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISS 192
D K T K D + + +I +K + + +K+ + ++ + R KLP S
Sbjct: 390 DGPTHYKKGSTNKKNRDEIAWDDILRQDIEIKAKFMNK--QKNPHYLKMKDVRRKLPAWS 447
Query: 193 FKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW------SKGETCKIVCTQPRRI 246
+ + T+ NQV +ISGETGCGK+TQVPQF+L+ W E +IVCTQPRRI
Sbjct: 448 KMNEVLETIHENQVTIISGETGCGKSTQVPQFILDD-WIINMSEESKEHVEIVCTQPRRI 506
Query: 247 SATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEA 306
SA VAER++ ER E IG+ IGY+IRLESK ++ + FCT G+LL+ L G +LK
Sbjct: 507 SAIGVAERVAAERDERIGNTIGYQIRLESKVSSNTRLTFCTTGILLQRL--SGDPQLK-- 562
Query: 307 SNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQ 366
++THIIVDE+HER SDF+L +++ +L L++ILMSATL +D FS
Sbjct: 563 ----------SVTHIIVDEVHERSAESDFLLMLLKKLLRQRRDLKVILMSATLKSDIFST 612
Query: 367 YFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLD 426
YFGG PV+ +PG T+PV F+LED+L + SN+ + EEN S
Sbjct: 613 YFGGVPVLDIPGRTFPVTQFFLEDILEM-----SNY--------------VLEEN-SKYT 652
Query: 427 EAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGA 486
I W ++ ++ LE E L +A K + D + L
Sbjct: 653 RKIKGGW--EQLNVELETADAES----------------LATVAPKNTILDENLTL---- 690
Query: 487 DCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLV 546
QI+ ++ + + S ++D +N ELI+ V
Sbjct: 691 ------------------------PQIMGRYSDYSRSTHKNLYVMDH--EKINFELIERV 724
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS-KFVIIPLHSMVPSV 605
IE ++ G+ILVFLPG +I +D L N S KF+IIPLHS + S
Sbjct: 725 -IEWIVDGDHDYPRSGSILVFLPGIAEIMSLKDLLNDNRMLSPKSGKFLIIPLHSTLSSE 783
Query: 606 QQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 665
+Q VFKRP PG RKI+LSTNIAET++TIDD V+VID+G+MKE ++ N+ +L+ WV
Sbjct: 784 EQSLVFKRPKPGVRKIVLSTNIAETSVTIDDCVFVIDTGKMKETRFNSNQNMESLEMCWV 843
Query: 666 SKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
S+A+A QR GRAGR +G+C HLY+ R S +PEI RI +E L L++K+L +
Sbjct: 844 SRANALQRKGRAGRVMSGVCIHLYTSYRFNYSFLAQPIPEILRISLEPLLLRIKILHKSQ 903
Query: 725 NIEDF--LQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+++ + L K L+PP +I AI LQD+GA + +T LG L L V + K++
Sbjct: 904 DVDLYQSLGKLLEPPAQDSISTAIKRLQDVGAFDPESMLTPLGHHLAALPVDVRIGKLIL 963
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F + C+D ALT+A ++ PF +P ++K A K E A+ SDQL + A+
Sbjct: 964 FGAIFCCVDSALTIAACLSHKSPFVVPF--DKKYEVNAKKKEYAT---ANSDQLTTLKAY 1018
Query: 843 ECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV-------- 892
W G A F + F+S + L ++ QL L+ GF+P ++
Sbjct: 1019 RKWLEISAHGYLAGQTFANANFLSVRTLQTLADIKHQLLELLVSIGFVPVNIRKRPMGQD 1078
Query: 893 -------SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGR----------------R 929
+ N ++ +L A LYP V ++ P K+ + R
Sbjct: 1079 KILEVTGQELNTNNENYNLLQGLLCAALYPNVVKVFTPEKSFQMQSSGAIPRQPKPEELR 1138
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
F +T V +HP S+NF + + + P +V+ E + + +R T+V L L+L
Sbjct: 1139 F-QTKEDGMVNIHPSSINFSVGYYTS---PYLVFQEKIK-TSRIFIREVTMVPMLALVLF 1193
Query: 990 A 990
+
Sbjct: 1194 S 1194
>gi|47222106|emb|CAG12132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1807
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 250/640 (39%), Positives = 371/640 (57%), Gaps = 64/640 (10%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG---ETCK 237
++E+R KLP ++ I ++ +QV+++SG TGCGKTTQ+PQF+L+ KG
Sbjct: 9 MLEQRRKLPAWQERENILGALEQSQVLVVSGMTGCGKTTQIPQFILDASL-KGPAERVAN 67
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I+CTQPRRISA SVA+R++ ER E++G ++GY+IRLES + +++CT GVLLR L
Sbjct: 68 IICTQPRRISAVSVAQRVAQERAEHLGKSVGYQIRLESVRSPATRLLYCTTGVLLRRLEG 127
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
++S +TH+IVDE+HER SDF+L +++D++ LR++LMSA
Sbjct: 128 DA--------------ELSGVTHVIVDEVHERTEESDFLLLVLKDLMAQRSDLRMVLMSA 173
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPEL 417
TL+A FS YF CP I +PG T+PV F+LED + A+SN++ ED
Sbjct: 174 TLNAHLFSDYFYNCPSIHIPGRTFPVDQFFLEDAI-----AKSNYV--------MEDGSP 220
Query: 418 TEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGD 477
A S + D + +L +V+N+ M K V D
Sbjct: 221 YARTGKQNPPAASGRGTPGTRDAVEDL-----GDDVWNF----------MSFCKKDFVKD 265
Query: 478 VC--MLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYL 535
M LSL + L+ K T G + E I A++D+ K L K +
Sbjct: 266 SVPDMQLSL-QELTLRYKGELTNPCRGGLTARVEATNAINA----AVADAKKSVL--KTI 318
Query: 536 ATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDT 590
A ++ + I++ L+E LL I D GA+LVFLPG +I ++L+ N F R T
Sbjct: 319 AGMDLDKINMDLVENLLEWIVEGKHDYPPGAVLVFLPGLAEIKMLYEQLMCNRIFNNRGT 378
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK- 649
+ + PLHS + + +Q+ VF RPP G KII+STNIAET++TIDDVVYVIDSG+MKEK
Sbjct: 379 KRCAVYPLHSSLSNEEQQAVFGRPPEGVTKIIISTNIAETSVTIDDVVYVIDSGKMKEKR 438
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRI 708
YD ++ +L+ +WVS+A+A QR GRAGR +G+C+HL+ S L + Q+PEI+R+
Sbjct: 439 QYDASKSMESLEDTWVSRANALQRKGRAGRVASGVCFHLFSSHCFQHQLAEQQLPEIQRV 498
Query: 709 PIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766
P+E+LCL++K+LD +E + ++PP ++ A L+D+GAL+ +EK+T LG
Sbjct: 499 PLEQLCLRIKILDVFSEQTLESVFCRLVEPPAVESLDAAKQRLRDLGALTAEEKLTPLGY 558
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPF 806
L CL V + K++ F + CLDPALT+A + ++ PF
Sbjct: 559 HLACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPF 598
>gi|321463178|gb|EFX74196.1| hypothetical protein DAPPUDRAFT_307460 [Daphnia pulex]
Length = 1066
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 275/847 (32%), Positives = 442/847 (52%), Gaps = 66/847 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
V R LPI ++ I + ++ QVV+I+G GCGKTTQVPQ++LE+ + K C+I+
Sbjct: 26 FVHHRRNLPIFKYRQEILNQLECQQVVVIAGNVGCGKTTQVPQYILENAYEKKGACRIIS 85
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
QPRR+S + +R+ ERG+ +G++ RLESKG + ++FCT GV LR L+
Sbjct: 86 IQPRRLSVHAALDRVIAERGK----LVGHQTRLESKGTVNCPLIFCTTGVFLRSLIENDR 141
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
+ +TH+I+D++HERDR++D +L + R L YP LRLIL+SA +
Sbjct: 142 C-------------LKGITHVIIDQVHERDRFTDLLLGVFRLRLSQYPDLRLILLSADMA 188
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
+ YF +I+VP + PV +LED+L+ K L + + V ELT
Sbjct: 189 PHALANYFHQEKIIRVPVSSTPVSQLFLEDILTCTKFLSKQKLLTGAGGVKG---ELTLG 245
Query: 421 NKSTLDEAISLAWSNDEFDMLLELVSL--EGSPNVYNYQHTLTGLTPLMVLAGKGRVGDV 478
+ D+ I+ AW N + L ++ L +G+ + +YQH+ TG+T LM A G++ V
Sbjct: 246 PANVFDDLITEAWYNGSDLIFLHIMKLVRDGAMPI-DYQHSQTGITVLMACANHGKLDIV 304
Query: 479 CMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHME---NALSDSMKQQ------ 529
M +SLGAD L+ K G T+ L + +PEVA ++ + + N + +++ Q
Sbjct: 305 KMAISLGADPTLQVK-GMTSYDLANEFARPEVADLLLSYSQVFYNEVGNNVVIQEPLTVN 363
Query: 530 ------LLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLA 583
+L + A + + +L LI ++L + S+ G ILV LP + ++ + RD ++A
Sbjct: 364 YNSPDDVLKSFYAKYSQDHANLDLIIEVLNYVQGYSQPGTILVLLPAYSEVVELRDMIIA 423
Query: 584 NPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDS 643
+ +K + LH + KK+F P RK+ILSTNIAET+I+ DDV+ VIDS
Sbjct: 424 ST-SSLKNKLEVHTLHGHLFPNDFKKIFCPAPADKRKVILSTNIAETSISFDDVICVIDS 482
Query: 644 GRMKEKSYD-PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQV 702
G +++ D + N Q W+SKASA QR GI +HLY + L ++ V
Sbjct: 483 GLFRDRENDVVFTNPKKTQ--WISKASAAQRVMHVR--NGGIVFHLYPRSTLDGLQEYPV 538
Query: 703 PEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
PEI R P+ ++CL +L+ P + + F D P + + AI +L+ I A KV
Sbjct: 539 PEITRDPLIDVCLFARLIIPEDMRLPQFFCSLPDGPPTTAVHQAIEILESIDAFDSQSKV 598
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T++G +L LSV P + K+L ++ + CLDP LT+ C DPF P+SP+E+K A
Sbjct: 599 TDVGLRLIDLSVEPRLGKILLVSVGLRCLDPVLTIICCLARDDPFITPVSPDERKVAIMR 658
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTE 881
+++LA Y SD LA++ A+ W+ G++ C + ++S + ++ +R L E
Sbjct: 659 RYDLAPDY--LSDHLALLRAYHLWEKGNDEGRKRQVCQENYLSVANIELVFLLRVLLVGE 716
Query: 882 LIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA 937
L +G++ D+ + + ++ I A L +GLYP +AR P + T
Sbjct: 717 LRASGYVRSRGSADIRNLNIHSESWTAIKAALTSGLYPNLARYSPTDGG----IITQNET 772
Query: 938 KVRLHPHSL-------NFKLSF---KKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
+ + H S N L F D P +++++ R +R C+VV P+ L
Sbjct: 773 RSQFHFTSTLLVQEGRNNGLGFVAASSADSLPWVIFEDQQRAGQFTVLRCCSVVTPITAL 832
Query: 988 LLATEIA 994
L A +
Sbjct: 833 LFAGHLG 839
>gi|307103751|gb|EFN52009.1| hypothetical protein CHLNCDRAFT_139551 [Chlorella variabilis]
Length = 731
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/489 (43%), Positives = 303/489 (61%), Gaps = 44/489 (8%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
++ R LPI+SF++ I S +DS+QVVLI+GETGCGKTTQVPQ++LE W +G+ C++VC
Sbjct: 229 LIAGREALPIASFREQIVSALDSSQVVLIAGETGCGKTTQVPQYILEDAWYRGKGCRVVC 288
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRRISA SVAER++ ERGE +GDN+GY IRLES+GG SS++FCTNGVLLR+L + G
Sbjct: 289 TQPRRISAVSVAERVAAERGEGVGDNVGYTIRLESRGGPASSLMFCTNGVLLRMLTA-GA 347
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
PA+D ++++TH++VDEIHERDR++DF+L ++RD+LP++PHLR++LMSATL
Sbjct: 348 RGGGGGGGGPARDPLASVTHLVVDEIHERDRFADFLLILVRDLLPAHPHLRVVLMSATLH 407
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAES--------NHLDSASLIVPN 412
D FS YFGGCPV++VPGFT+PV+ FYLE +L++ E+ AS
Sbjct: 408 IDLFSGYFGGCPVVRVPGFTHPVEDFYLESILALTGYQEAAVRQVGGLTGGTGASRATAP 467
Query: 413 EDPELTEENKSTLDEAISLAW---SNDEFDMLLELVSL-------EGSPNVYNYQHTLTG 462
L + + ++EAI A+ +++ F+ LLE+ +G+P V N +HT G
Sbjct: 468 PPASLPAKERRRIEEAIEAAFTTGTDEAFEALLEVTGAAGADDMSQGAPGV-NVKHTAKG 526
Query: 463 LTPLMVLAGKGRVGDVCMLLSLGAD--CQLKAKDGRTALQLGEQENQPEVAQIIKKH--- 517
T LM A GR V LLS GAD L +TA L V +++ +
Sbjct: 527 ATALMAAAVHGRADVVSALLSNGADPSVALPGAGAQTARDLAALYGHGAVVEVLDEFGEG 586
Query: 518 MENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSED---------------- 561
A + L Y A N + +D+ LI LL C +
Sbjct: 587 AAAAEELANAALALSHYQAQTNADEVDVDLIHLLLMYACQEGVFKKTDAEAAAAAAAGPQ 646
Query: 562 --GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
GA+LVFLPGW++I + +++L ++P F +S++ ++PLHSMV +Q++VF RPP G R
Sbjct: 647 VLGAVLVFLPGWDEIMRLKEKLESSPAF-GSSRYQLLPLHSMVAPAEQRRVFVRPPAGVR 705
Query: 620 KIILSTNIA 628
KI+L+TNIA
Sbjct: 706 KIVLATNIA 714
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 19/119 (15%)
Query: 24 VAEATRIRISQILDGFLAS---------------KDEVYTFDANLSNRERAVVHEVCKKM 68
VAE TR+ I++ L+ F S Y F LSN +RAVVH CKK
Sbjct: 27 VAENTRLSITEQLELFQRSDATGELPGSASGRQQAGTEYAFPPGLSNHDRAVVHAECKKY 86
Query: 69 GMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGE 127
G TSKS G+ + R V V K ++R D E L S L+ F +PP E
Sbjct: 87 GFTSKSHGKNESRCVCVYKRQQRRGGDPAFE----LPLGPQSLAALEAYFHAHPPSQAE 141
>gi|307171304|gb|EFN63229.1| Putative ATP-dependent RNA helicase DHX57 [Camponotus floridanus]
Length = 1261
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 280/867 (32%), Positives = 439/867 (50%), Gaps = 145/867 (16%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW-- 230
+K+ N ++ + R KLP I + NQ+V+ISGETGCGK+TQVPQF+L+ W
Sbjct: 416 QKNPNYIKMQKTRKKLPAWLKTSEILKIIRENQIVIISGETGCGKSTQVPQFILDD-WII 474
Query: 231 --SKGETC---KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVF 285
S+ E I+CTQPRRISA VA+R++ ER E+IG+ IGY+IRLESK + + F
Sbjct: 475 NRSQSENTSHINIICTQPRRISAIGVAKRVAAERDESIGNTIGYQIRLESKMSSKTRLTF 534
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G+LL+ L ++S +TH+IVDE+HER SDF+L +++++LP
Sbjct: 535 CTMGILLQRL--------------SGNLELSDVTHVIVDEVHERSAESDFLLMLLKELLP 580
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDS 405
P L++ILMSATL AD FS YFG PV+ +PG T+PV+ +LED L
Sbjct: 581 KRPSLKIILMSATLKADIFSSYFGKVPVLNIPGKTFPVEQIFLEDAL------------- 627
Query: 406 ASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTP 465
E + E + I W D+F++ LE+ L
Sbjct: 628 -------EKTKYVLEENTQFTRKIKYDW--DQFEIDLEMAKL------------------ 660
Query: 466 LMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDS 525
++G++C T + + EN + Q+I ++
Sbjct: 661 --------KIGELC---------------NDTPKESIQDENLT-LMQLISRY-----PGC 691
Query: 526 MKQQLLDKYLATVNPELIDLVLIEQLLRKICMDS----EDGAILVFLPGWEDINKTRDRL 581
KQ + Y+ ++ E I+ LIE+ L + + G+ILVFLPG DI +++L
Sbjct: 692 SKQTYKNLYI--MDQEKINFELIEKTLEWVVFGKHVYPKTGSILVFLPGMSDILALKNQL 749
Query: 582 LANPFFR-DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYV 640
N F KF+I+ LHS + + +Q VFK+ RKI+LSTN+AET+ITIDD V+V
Sbjct: 750 HNNNNFSPKNKKFLIVSLHSSLSNEEQNLVFKKTGEDVRKIVLSTNLAETSITIDDCVFV 809
Query: 641 IDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDF 700
ID+G+MKE ++ N+++L + W+S+A+A QR GR+GR G+C HLY+ R
Sbjct: 810 IDTGKMKETRFNSNQNMASLDTCWISRANAVQRMGRSGRVMPGVCIHLYTSCRFKYHFGA 869
Query: 701 Q-VPEIKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL 757
Q +PEI RIP+E L L ++L+ ++ D L K ++PP I++AII LQD+GA +
Sbjct: 870 QPIPEILRIPLEPLLLHIQLMHKGKKVDLYDILGKMIEPPTIDNIKSAIIRLQDVGAFNS 929
Query: 758 DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR 817
+ +T LG L L V+ + K++ + + CLD ALT+A ++ PF +PI K
Sbjct: 930 EPVLTPLGHHLAKLPVNVRIGKLILYGAIFCCLDSALTIAACLSHKSPFNVPIDMINKID 989
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMR 875
+ + +SDQL V+ A++ W R A F + ++S ++ L ++
Sbjct: 990 PK------KNFFTAESDQLTVLNAYKKWLATCSRSTYAGKVFADKNYLSIQTLHHLADIK 1043
Query: 876 KQLQTELIKNGFIPEDV---------------SSCSHNARVPGIIHAVLMAGLYPMVARL 920
Q L+ GF P D+ + + N ++ +L A LYP + ++
Sbjct: 1044 YQFLELLVSIGFAPIDLPKKKPKIDNILEITGAELNVNNENYKLLQGLLCAALYPNIVKV 1103
Query: 921 RPPHK----------------NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYD 964
P K N +F +T V++HP S+NF + P +V+
Sbjct: 1104 FTPGKSFQAQSTGMIPMRPKPNELKF-KTRHDGFVKIHPSSVNFHVGHFIN---PYLVFQ 1159
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLAT 991
E + + ++ +++ L L+L ++
Sbjct: 1160 EKFKT-SQVFIKEVSMIPILSLILFSS 1185
>gi|111305697|gb|AAI21455.1| LOC779469 protein [Xenopus (Silurana) tropicalis]
Length = 729
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 258/722 (35%), Positives = 381/722 (52%), Gaps = 114/722 (15%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F S + F ++L++ ERA +H + + +G+ SKS G+G R
Sbjct: 33 IDEEVKIAVNIALERFRYSDQKEMEFPSSLTSTERAFIHRLAQSLGLVSKSKGKGPNR-- 90
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
C + K+ + L S T ++ +K + +L +P + E E L +
Sbjct: 91 --CLTLKKKNGSEASSSLMSCTLTQNTKKAVCNLIQRFPLTNKERTELLPKTE------- 141
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE---RSKLPISSFKDVITST 200
RG I + EI L I + + R + R LP+ ++ I
Sbjct: 142 RGNVYAI----EAENREIGKTSGCLNGGIPQVPDKRGESKYDFFRQSLPVFEKQEDIIRI 197
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERG 260
+ +N+VVLI GETG GKTTQ+PQF+L++ G C+I CTQPRR++A SVAER++ ERG
Sbjct: 198 IKNNKVVLIVGETGSGKTTQIPQFILDNCQKNGLPCRIFCTQPRRLAAISVAERVAAERG 257
Query: 261 ENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTH 320
E IG +GY+IRLES+ + + FCTNGVLLR L+ G S L SA+TH
Sbjct: 258 EIIGQCVGYQIRLESRVSPKTLLTFCTNGVLLRTLMG-GDSTL------------SAITH 304
Query: 321 IIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFT 380
IIVDE+HERDR+SDF+L +RD + +P L+LIL SA LD + F +YFGGCPVI + G
Sbjct: 305 IIVDEVHERDRFSDFLLTKLRDAIQEHPTLKLILSSAALDVNLFIRYFGGCPVIYIQGRP 364
Query: 381 YPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSN----- 435
+ VK +LED+L S + ++ N++ + E+ K+TL E S N
Sbjct: 365 FEVKEMFLEDIL------RSTGYRNKGMLKYNKEKQCEEKQKTTLTEWYSAKQKNMKPET 418
Query: 436 ----------DEFDML-------------------------------------------L 442
+E+D+L
Sbjct: 419 QRQRSVPAIKEEYDILDDGGDTAFGQMTEKDANCLEPWLIKEIDACLSDIWLYRDKDAFA 478
Query: 443 ELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQL 501
+L L + NV +Y+H+ T TPLMV AG+G + V L+S+GA+ Q KA +G AL
Sbjct: 479 QLFHLISTENVSVDYRHSETSATPLMVAAGQGFLSHVEQLISMGANIQSKASNGWMALDW 538
Query: 502 GEQENQPEVAQIIKKHM---------ENALSDS-------MKQQLLDKYLATVNPELIDL 545
+ Q EV +++ + EN L S ++LL Y + + E +DL
Sbjct: 539 AKHFGQTEVVDLLESYSASLETEDLDENTLVQSDGNDLSIEDRELLKAYHHSFDDEKVDL 598
Query: 546 VLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVP 603
LI +L IC ++ GAIL+FLPG+++I RDR+L + F + ++ + LHS +
Sbjct: 599 DLIMHVLFNICQITDTGAILIFLPGYDEIVGLRDRILLDDKRFADNAQRYHVFMLHSNMQ 658
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+ QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D NNV+ L+
Sbjct: 659 TSDQKKVLKLPPAGIRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNNVTMLKMV 718
Query: 664 WV 665
W+
Sbjct: 719 WI 720
>gi|356569955|ref|XP_003553159.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like, partial
[Glycine max]
Length = 1025
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/454 (50%), Positives = 286/454 (62%), Gaps = 81/454 (17%)
Query: 272 RLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
R ES+GG+ SSIV CT GVLL++LVS G LK + KDD+S+++HII+DEIHERD
Sbjct: 1 RFESRGGRQSSIVLCTTGVLLKVLVSTGSHFLK---TRLVKDDISSISHIIMDEIHERDS 57
Query: 332 YSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
YS+ ML+I+R+MLPS PHL LILMSA++DA RFSQYFG CP+I VPG TYPVK++YLEDV
Sbjct: 58 YSNLMLSILREMLPSNPHLCLILMSASVDAARFSQYFGVCPIIYVPGLTYPVKTYYLEDV 117
Query: 392 LSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSP 451
LSI+KS NH EL++ K +LD+AI+LAWSNDE+ LLELV + SP
Sbjct: 118 LSIIKSGADNH-------------ELSQVEKLSLDDAINLAWSNDEWCSLLELVYSKASP 164
Query: 452 NVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVA 511
V++YQH+L GL PLMV A KG+V G C L L LGE
Sbjct: 165 KVFDYQHSLIGLNPLMVFARKGKV---------GYMCML--------LSLGEN------C 201
Query: 512 QIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMD--SEDGAILVFLP 569
+ K AL S K+ V++E L + + D +++G L+
Sbjct: 202 HLRAKDGTTALEISEKEN--------------QQVVVELLKKHMDNDFSNQEGKNLL--- 244
Query: 570 GWEDINKTRDRLLA--NPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
D+ LA NP D ++ + ++ KK+ GCRKI LSTNI
Sbjct: 245 ---------DKYLATVNPKVVD-----VVLIEQLI-----KKICMHL--GCRKIFLSTNI 283
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AETA+T+DD+VYVID G +KEKSYDPY+NV TLQSSW+SKASAKQR G A RC GICY
Sbjct: 284 AETAVTLDDIVYVIDIGLVKEKSYDPYHNVFTLQSSWISKASAKQREGCASRCHLGICYR 343
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
LYS+++ ASLPDFQVPEIKR+ IEELCLQ K D
Sbjct: 344 LYSKVQVASLPDFQVPEIKRMLIEELCLQGKFGD 377
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/426 (46%), Positives = 257/426 (60%), Gaps = 62/426 (14%)
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
+ + TLDPP S ++RNA+ VLQ+IGALS+DE++T+LG+KLGCL +HP +ML F+IL
Sbjct: 600 KSLIDWTLDPPGSESVRNAVGVLQEIGALSVDEQLTQLGQKLGCLPIHPSTGRMLIFSIL 659
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
M CLDPALTLACA ++ DPF PI P+EKKRA+AA+ EL SLYGG DQ A++AAFECW
Sbjct: 660 MICLDPALTLACAFEFNDPFVHPILPDEKKRASAARSELGSLYGGCGDQFAIVAAFECWH 719
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIH 906
N+K+ G E+ FCS YFVS +MN L GMRK L EL +NG I +S NA PGI+
Sbjct: 720 NSKEMGLESRFCSHYFVSQSIMNKLSGMRKNLAAELYQNGLIHGQFTSYCSNAHDPGILK 779
Query: 907 AVLMAGLYPMVARLRPPHKNGRR-FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDE 965
+L+AG+YPMV +L P K+G++ FV+T S +F S L+VY+E
Sbjct: 780 VILVAGMYPMVGKLFFPSKSGKKIFVKTK----------SESFYFS--------LVVYNE 821
Query: 966 --ITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDED 1023
IT D GM +RNCTVVG LPL LL+ EI VAP D +E + +S DD
Sbjct: 822 NEITSHDCGMCIRNCTVVGLLPLFLLSKEIIVAPTKDC--TEEHESLSSDDV-------- 871
Query: 1024 CMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVT 1083
V V++D+W+YF ST LD Q+ LRE+LS ILF+VT
Sbjct: 872 -----------------------VRVIIDQWIYFESTTLDACQMNYLREKLSATILFQVT 908
Query: 1084 HPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKC-PAARNRGT 1142
H LP VL +++ +A I+S G SGI P S + T I +E+ P A
Sbjct: 909 HSTDVLPHVLRSTVDVLACIMSCHGLSGI--PQTSDCANTHQINPSEVKVSEPEAH---- 962
Query: 1143 GQNPSN 1148
+NPSN
Sbjct: 963 -ENPSN 967
>gi|340371317|ref|XP_003384192.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Amphimedon
queenslandica]
Length = 940
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/508 (40%), Positives = 316/508 (62%), Gaps = 20/508 (3%)
Query: 502 GEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLAT----VNPELIDLVLIEQLLRKICM 557
G QE + E Q +K E L++ + Q ++A+ ++ E IDL LI LL+ I
Sbjct: 359 GRQEWEEE--QSLKAEAEEYLNEVERDQKYGPHVASALRDMDLEKIDLHLIHSLLKHISF 416
Query: 558 DSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPG 617
+ EDGAILVFLPGW+ I+K D L ++ FR++SKF+IIPLHSM+P+ QK+VF RPPPG
Sbjct: 417 NMEDGAILVFLPGWDTISKLHDLLRSDGMFRNSSKFLIIPLHSMMPTTSQKEVFDRPPPG 476
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
RKII++TNIAET+ITIDDVV+VID G++KE +YD N ++ L+S W SKA+A QR GRA
Sbjct: 477 VRKIIIATNIAETSITIDDVVFVIDGGKVKETTYDVANQLACLESVWESKAAATQRKGRA 536
Query: 678 GRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
GR Q G C++L++ + + L +FQ+PE+ R P+EEL LQ+K+L E FL K L+PP
Sbjct: 537 GRVQPGHCFYLFTSHQYSKLNEFQLPEMLRTPLEELVLQIKMLHLG-KAEPFLSKALEPP 595
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
+ +I +A+ +L+++ AL ++E++T LG L L VHP + +M+ F ++ CLDP LT+A
Sbjct: 596 ETKSIHDAVDLLKNLNALDVNEELTPLGYHLANLPVHPRVGRMILFGAMLSCLDPVLTIA 655
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF 857
A +++PF +P+ E+ A K ELA G +SD +A++ AF W+ +++ G +
Sbjct: 656 AALGFKEPFVIPLHKQEE--ADRMKKELAR--GSESDHIALLNAFNGWEQSRRHGNTRQY 711
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED---VSSCSHNARVPGIIHAVLMAGLY 914
C +F+SS + +L M++Q L + GF+ + S +HN+ +I A+L AGLY
Sbjct: 712 CWDHFLSSNTLELLSNMKRQFAGLLHEIGFVSDSNPKTPSANHNSDNVKLIKAILCAGLY 771
Query: 915 PMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH 974
P VA++ P + + + + G KV+ HP S+N + K+ ++Y + +
Sbjct: 772 PNVAKITPGKRVAKLYTQQDG--KVKFHPKSVNSEQGNFKSQ---FLIYHTKVKST-AIF 825
Query: 975 VRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+ + +V+ P PLL EIA D E
Sbjct: 826 IHDASVIPPFPLLFFGGEIAAGRDADQE 853
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 194/325 (59%), Gaps = 36/325 (11%)
Query: 77 RGKQRRVSVCKSKKRV-ETDKGKEILPSLTFSEGSKLVLQDL-FTHYPPDDGEPGEKLDA 134
RGK+R+V+ ++++ V D+ E E ++ +LQD+ T+ P ++ + EK A
Sbjct: 54 RGKERKVARERNERAVVSIDRRSE-------REITQ-ILQDIDGTNEPMEESDGQEKEGA 105
Query: 135 NQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFK 194
+ S T I P + E+ + SR ++++E R LP K
Sbjct: 106 SLQYPSVAT-----PILTTPTHTDEELLKEQRQRESR----PAYKKMMEFRQALPSWGMK 156
Query: 195 DVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVA 252
D I V+ NQV++ISG+TGCGKTTQ+ QFLL+ +G C ++CTQPRRISA SVA
Sbjct: 157 DEIVQAVNDNQVIVISGQTGCGKTTQISQFLLDDAIGRGCGSKCHVICTQPRRISAISVA 216
Query: 253 ERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPA 311
+R++ ER E++G ++GY+IRLE + + SI++CT G+++R L S P
Sbjct: 217 QRVAAERAESLGTSVGYQIRLEGTLPRDNGSILYCTTGIMVRRLASD-----------PL 265
Query: 312 KDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGC 371
+VS H+I+DE+HER+ +DF+ I++D++P P L++ILMSAT++A+ FS YF
Sbjct: 266 LQNVS---HLILDEVHERNNITDFLSIIVKDIIPKKPDLKVILMSATINAELFSNYFNNA 322
Query: 372 PVIQVPGFTYPVKSFYLEDVLSILK 396
P+I +PG +PVK +LEDV+S+ +
Sbjct: 323 PIISIPGRVFPVKEHFLEDVISLTR 347
>gi|344288908|ref|XP_003416188.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Loxodonta africana]
Length = 1011
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/560 (39%), Positives = 324/560 (57%), Gaps = 64/560 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 465 LEMMDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISSLHDLLMSQVMFK-SDKFL 523
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 524 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 583
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 584 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 643
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL++ +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 644 LQIKILRLG-GIAYFLRRLMDPPSNEAVLLSIKHLIELNALDKQEELTPLGVHLARLPVE 702
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA G +SD
Sbjct: 703 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--GSRSD 758
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AF+ W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 759 HLTVVNAFKGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHSMKAQFAEHLLGAGFVGGRN 818
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++RP R+ V+ T V +HP S+
Sbjct: 819 PKDPDS-NINSDNEKIIKAVICAGLYPKVAKIRPNLGKKRKMVKVYTKSDGLVAIHPKSV 877
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
N ++TD + + +++ +CT V P LL +I++ +DDD+
Sbjct: 878 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISI-----QKDDDQ 928
Query: 1007 DDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQ 1066
+ T+ VD W+ F S A
Sbjct: 929 E----------------------------------------TIAVDEWIVFQSPARIAHL 948
Query: 1067 IYCLRERLSVAILFKVTHPQ 1086
+ LR+ L V + K+ P
Sbjct: 949 VKELRKELDVLLQEKIESPH 968
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 150/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCTQ 242
R KLP + + S + ++QV +ISGETGCGKTTQV QF+L+ KG C+IVCTQ
Sbjct: 207 REKLPSHGMQKELVSLIANHQVTVISGETGCGKTTQVTQFILDDYIKQGKGSACRIVCTQ 266
Query: 243 PRRISATSVAERISVERGE--NIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E G++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 267 PRRISAISVAERVAAERAEPCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD- 325
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++H+++DEIHER+ SD ++ +I+D+L S P L++ILMSATL
Sbjct: 326 -------------PHLSSVSHMVLDEIHERNLQSDVLMTVIKDLLTSRPDLKVILMSATL 372
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 373 NAEKFSEYFGHCPMIHIPGFTFPVVEYLLEDIIEKIR 409
>gi|426218091|ref|XP_004003283.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1 [Ovis
aries]
Length = 1010
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/476 (43%), Positives = 299/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+ ++ E +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 464 IEVMDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFI 522
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 523 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 582
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 583 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELC 642
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 643 LQIKILRLG-GIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVE 701
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 702 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELAK--DTKSD 757
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AF+ W+ AKQRG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 758 HLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRN 817
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 818 PQDPES-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSV 876
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + + + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 877 NVE---QTEFNYNWLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 928
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 178/279 (63%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ ++ + R K +D + + + E + + L +K +LR I +
Sbjct: 144 EHQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDAILDQQLLEDLQKKKTDLRYIEMQ 203
Query: 185 R--SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 204 RFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 263
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 323
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +++D+L P L+++LMSA
Sbjct: 324 DP--------------HLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSA 369
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 370 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 408
>gi|122692521|ref|NP_001073720.1| probable ATP-dependent RNA helicase DHX36 [Bos taurus]
gi|115545400|gb|AAI22653.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Bos taurus]
gi|296491062|tpg|DAA33145.1| TPA: DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Bos taurus]
Length = 1010
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/473 (44%), Positives = 298/473 (63%), Gaps = 19/473 (4%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
++ E +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIP
Sbjct: 467 MDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFIIIP 525
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+
Sbjct: 526 LHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNI 585
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+
Sbjct: 586 STMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQI 645
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+L I FL + +DPP + + +I L ++ AL E++T LG L L V P +
Sbjct: 646 KILRLG-GIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHI 704
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L
Sbjct: 705 GKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELAK--DTKSDHLT 760
Query: 838 VIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PED 891
V+ AF+ W+ AKQRG E +C +YF+SS + ML M+ Q L+ GF+ P+D
Sbjct: 761 VVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQD 820
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFK 949
S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N +
Sbjct: 821 PES-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVE 879
Query: 950 LSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+ + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 880 ---QTEFNYNWLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 928
Score = 212 bits (540), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 178/279 (63%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ ++ + R K +D + + + E + + L +K +LR I +
Sbjct: 144 EHQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDATLDQQLLEDLQKKKTDLRYIEMQ 203
Query: 185 R--SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 204 RFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 263
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 323
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +++D+L P L+++LMSA
Sbjct: 324 DP--------------HLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSA 369
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 370 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 408
>gi|440895350|gb|ELR47562.1| Putative ATP-dependent RNA helicase DHX36 [Bos grunniens mutus]
Length = 1010
Score = 382 bits (980), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/473 (44%), Positives = 298/473 (63%), Gaps = 19/473 (4%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
++ E +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIP
Sbjct: 467 MDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFIIIP 525
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+
Sbjct: 526 LHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNI 585
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+
Sbjct: 586 STMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQI 645
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+L I FL + +DPP + + +I L ++ AL E++T LG L L V P +
Sbjct: 646 KILRLG-GIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHI 704
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L
Sbjct: 705 GKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELAK--DTKSDHLT 760
Query: 838 VIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PED 891
V+ AF+ W+ AKQRG E +C +YF+SS + ML M+ Q L+ GF+ P+D
Sbjct: 761 VVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQD 820
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFK 949
S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N +
Sbjct: 821 PES-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVE 879
Query: 950 LSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+ + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 880 ---QTEFNYNWLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 928
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 178/279 (63%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ ++ + R K +D + + + E + + L +K +LR I +
Sbjct: 144 EHQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDATLDQQLLEDLQKKKTDLRYIEMQ 203
Query: 185 R--SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 204 RFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 263
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 323
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +++D+L P L+++LMSA
Sbjct: 324 DP--------------HLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSA 369
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 370 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 408
>gi|301607411|ref|XP_002933292.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform 1
[Xenopus (Silurana) tropicalis]
Length = 981
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/565 (40%), Positives = 319/565 (56%), Gaps = 74/565 (13%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L + E +DL LI +L+R I + EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 435 LELADDEKVDLDLIAELIRYIVLKGEDGAILVFLPGWDNISTLNDLLMSQVMFK-SDKFI 493
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFKRPPPG RKI+++TNIAET+ITIDDVV+VID G++KE +D
Sbjct: 494 IIPLHSLMPTVNQTEVFKRPPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQ 553
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVS A+AKQR GRAGR Q G CYHLY+ LR + L D+Q+PEI R P+EELC
Sbjct: 554 NNISTMTAEWVSHANAKQRKGRAGRVQPGHCYHLYNSLRDSLLDDYQLPEIVRTPLEELC 613
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL+K +D P TI AI L ++ AL E++T LG L L V
Sbjct: 614 LQIKILKLG-GIASFLRKLMDTPSRDTICLAINHLMELNALDKREELTPLGFHLARLPVE 672
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + EL+ +SD
Sbjct: 673 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKLADARRKELSR--NSKSD 728
Query: 835 QLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W++AK RG A +C + F+SS + ML M+ Q L+ GF+
Sbjct: 729 HLTVLNAFEGWEDAKWRGGRAERDYCWENFLSSNSLKMLSNMKGQFAEHLLSAGFVSSRS 788
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P D S + N+ +I AV+ AGLYP VA++RP R+ V+ T KV +HP S+
Sbjct: 789 PNDPKS-NINSTNEKLIKAVICAGLYPKVAKIRPNFGKRRKMVKVYTKSDGKVNIHPKSV 847
Query: 947 N-----FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDN 1001
N F S+ +VY R +++ +CT V P LL +I++
Sbjct: 848 NVEETEFHYSW--------LVYHLKMRT-TSIYLYDCTEVSPYSLLFFGGDISI-----Q 893
Query: 1002 EDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTA 1061
+D D+D T+ VD W+ F S A
Sbjct: 894 KDKDQD----------------------------------------TIAVDEWIVFQSPA 913
Query: 1062 LDIAQIYCLRERLSVAILFKVTHPQ 1086
+ L+ L V + K+ PQ
Sbjct: 914 RIAHLVKDLKSELDVLLKEKIEKPQ 938
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 154/217 (70%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HI-WSKGETCKIVCTQ 242
R KLP S K++I ++SNQV +ISGETGCGKTTQV QF+L+ HI KG +C IVCTQ
Sbjct: 177 REKLPSYSMKEMIIKMINSNQVTVISGETGCGKTTQVTQFILDDHIKRGKGSSCYIVCTQ 236
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E G ++ GY+IRLES+ K SI++CT G++++ L S
Sbjct: 237 PRRISAISVAERVAAERAEACGRGNSTGYQIRLESQMPRKQGSILYCTTGIVIQWLQSD- 295
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
++ ++H+++DEIHER+ SD ++AI++D+L L++ILMSATL
Sbjct: 296 -------------PHLANVSHVVIDEIHERNLQSDVLMAIVKDLLTFRSDLKVILMSATL 342
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FSQYF CP++ +PGFTYPVK + LEDV+ +L+
Sbjct: 343 NAEKFSQYFDSCPMLHIPGFTYPVKEYLLEDVIEMLR 379
>gi|345327898|ref|XP_001511483.2| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Ornithorhynchus
anatinus]
Length = 1002
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/563 (39%), Positives = 322/563 (57%), Gaps = 70/563 (12%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L T++ E +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 456 LETIDDEKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFI 514
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D
Sbjct: 515 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQ 574
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 575 NNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 634
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 635 LQIKILRLG-GIAYFLSRLMDPPSREAVLLSINHLMELNALDKQEELTPLGVHLARLPVE 693
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CL+P LT+A + ++DPF +P+ ++K A A + EL+ +SD
Sbjct: 694 PHIGKMILFGALFCCLEPVLTIAASLSFKDPFVIPLG--KEKIADARRKELSK--NTKSD 749
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 750 HLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVSSKN 809
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++RP R+ V+ T V +HP S+
Sbjct: 810 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSV 868
Query: 947 N---FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNED 1003
N F+ + ++Y R +++ +CT V P LL +I++ +D
Sbjct: 869 NVEEFQFHYN------WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISI-----QKD 916
Query: 1004 DDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALD 1063
D+D T+ VD W+ F S A
Sbjct: 917 KDQD----------------------------------------TIAVDEWIVFQSPARI 936
Query: 1064 IAQIYCLRERLSVAILFKVTHPQ 1086
+ LR+ L + K+ +P
Sbjct: 937 AHLVKELRKELDALLQEKIENPH 959
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 152/217 (70%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +++NQV +ISGETGCGKTTQV QF+L+ KG C+IVCTQ
Sbjct: 198 REKLPSYRMQKELVNLINNNQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQ 257
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 258 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 317
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++H+++DEIHER+ SD ++ +I+D+L P L++ILMSATL
Sbjct: 318 --------------QLSSVSHVVLDEIHERNLQSDVLMTVIKDLLDFRPDLKVILMSATL 363
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFGGCP+I +PGFT+PV + LEDV+ +K
Sbjct: 364 NAEKFSEYFGGCPMIHIPGFTFPVVEYLLEDVIEKIK 400
>gi|417405578|gb|JAA49498.1| Putative deah-box rna helicase [Desmodus rotundus]
Length = 1006
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 468 VDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SEKFLIIPLHSLM 526
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 527 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 586
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 587 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 646
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 647 G-GIAHFLSRLMDPPSNEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 705
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 706 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELAK--DSKSDHLTVVNAF 761
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 762 EGWEEARRRGYRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVNSRNPKDPKS-N 820
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 821 INSDNEKIITAVICAGLYPKVAKIRLNLGKKRKMVKVYTKNDGLVSIHPKSVN----VEQ 876
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 877 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 924
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 181/279 (64%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKM--SKAEIAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ +++ + R K +D + + +K ++ + + L +K + R I +
Sbjct: 140 EDQEKKSINQEKRTLRIRDKYIDRDSEYLLQENKPDVTLDQQLLEDLQKKKTDPRYIEMQ 199
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVC 240
R KLP + + + +D+NQV +ISGETGCGKTTQV QF+L++ +G C+IVC
Sbjct: 200 HFREKLPSFGMQKELVNMIDNNQVTVISGETGCGKTTQVTQFILDNYIERGNGSACRIVC 259
Query: 241 TQPRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++VER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 260 TQPRRISAISVAERVAVERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 319
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +++D+L P L++ILMSA
Sbjct: 320 DP--------------HLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVILMSA 365
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 366 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 404
>gi|148678047|gb|EDL09994.1| mCG11938 [Mus musculus]
Length = 1056
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/604 (36%), Positives = 339/604 (56%), Gaps = 52/604 (8%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP-- 585
++LL Y + + E +DL LI LL IC + GAIL+FLPG+++I RDR+L +
Sbjct: 214 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKR 273
Query: 586 FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
F +T ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG+
Sbjct: 274 FADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGK 333
Query: 646 MKE-KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPE 704
+KE KS+D N V+ L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE
Sbjct: 334 VKEQKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPE 393
Query: 705 IKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
+ R+P++ELCL KLL P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TE
Sbjct: 394 LLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTE 453
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A +
Sbjct: 454 LGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRK 513
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
+ G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR QL +L
Sbjct: 514 RFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 571
Query: 884 KNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAK 938
+GF+ D+ + N+ ++ A L+AG+YP + H + + T K
Sbjct: 572 ASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENVILTGPKEKK 626
Query: 939 VRLHPHSLNFKLSFKK---------------TDDCPLMVYDEITRGDGGMHVRNCTVVGP 983
VR HP S+ + +KK TD ++YDE+TR ++R C+ V P
Sbjct: 627 VRFHPTSVLSQPQYKKIPPANGQAAAIQALPTD---WLIYDEMTRAHRIANIRCCSAVTP 683
Query: 984 LPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSP 1043
+ +L+ P + + S AD +D E++D+T+
Sbjct: 684 VTVLVFC-------GPARLASNALQEPSSFRADGIPNDSSDSEMEDRTTANLA------- 729
Query: 1044 DKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASI 1103
+ +D WL F + + LR++ L ++ P K V EA++ A+ ++
Sbjct: 730 ----ALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAV 785
Query: 1104 LSYD 1107
LS +
Sbjct: 786 LSTE 789
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 128/190 (67%), Gaps = 13/190 (6%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ ++ I + N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPR
Sbjct: 28 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 87
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
R++A +VAER++ ER E IG IGY+IRLES+ + + FCTNGVLLR L++
Sbjct: 88 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA------- 140
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
+S +TH+IVDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F
Sbjct: 141 ------GDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLF 194
Query: 365 SQYFGGCPVI 374
+YFG CPVI
Sbjct: 195 IRYFGSCPVI 204
>gi|395842742|ref|XP_003794172.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36 [Otolemur garnettii]
Length = 1006
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/476 (43%), Positives = 299/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+ T++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 460 IKTMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFL 518
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 519 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 578
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 579 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 638
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP S + +I L ++ AL E++T LG L L V
Sbjct: 639 LQIKILKLG-GIAYFLSRLMDPPSSEAVLLSIRHLVELNALDKQEELTPLGVHLARLPVE 697
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 698 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSD 753
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 754 HLTVVNAFEGWEGARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVTNRN 813
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 814 PKDPES-NINSDNEKIIKAVICAGLYPKVAKIRLNFGKKRKMVKVYTKTDGVVAIHPKSV 872
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N ++TD + + +++ +CT V P LL +I++ D E
Sbjct: 873 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 924
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 150/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L+ KG C+IVCTQ
Sbjct: 202 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDSYIERRKGSACRIVCTQ 261
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ + SI++CT G++L+ L S
Sbjct: 262 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRQQGSILYCTTGIILQWLQSDP 321
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 322 --------------HLSSVSHIVLDEIHERNLQSDVLMTVMKDLLNFRSDLKVILMSATL 367
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ +K
Sbjct: 368 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKVK 404
>gi|126338459|ref|XP_001363983.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Monodelphis domestica]
Length = 1009
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/476 (43%), Positives = 299/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL L+ L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 463 LEMMDDDKVDLNLVAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFI 521
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D
Sbjct: 522 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQ 581
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 582 NNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 641
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 642 LQIKILRLG-GIAYFLSRLMDPPSHDAVLLSINHLMELNALDKQEELTPLGVHLARLPVE 700
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + EL+ +SD
Sbjct: 701 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELSK--NTKSD 756
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 757 HLTVVNAFEGWEEARRRGFRFEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVSSKN 816
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++RP R+ V+ T V +HP S+
Sbjct: 817 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSV 875
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + S + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 876 NVEESEFHYN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDKDQE 927
Score = 213 bits (542), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 171/280 (61%), Gaps = 41/280 (14%)
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE-----------------RS 186
RGK++ M K+ + E L E D +L Q ++E R
Sbjct: 152 RGKKL-----ADMGKSFVDRDSEYLLQENEPDVDLDQQLKEDLKRKKSDPRYIEMQHFRE 206
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQPR 244
KLP + + + +++NQV +ISGETGCGKTTQV QF+L+ KG +C+IVCTQPR
Sbjct: 207 KLPSYGMQKELVNLINNNQVTVISGETGCGKTTQVTQFILDDYIERGKGSSCRIVCTQPR 266
Query: 245 RISATSVAERISVERGE--NIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGVS 301
RISA SVAER++ ER E G + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 267 RISAISVAERVAAERAEPCGSGHSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD--- 323
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
+S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSATL+A
Sbjct: 324 -----------QQLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNA 372
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESN 401
++FS+YFGGCP+I +PGFT+PV + LEDV+ ++ N
Sbjct: 373 EKFSEYFGGCPMIHIPGFTFPVAEYLLEDVIEKIRYMPEN 412
>gi|332214486|ref|XP_003256366.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36 [Nomascus leucogenys]
Length = 1008
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/468 (44%), Positives = 294/468 (62%), Gaps = 20/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 471 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 529
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 530 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 589
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 590 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 649
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 650 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 708
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 709 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--NTRSDHLTVVNAF 764
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 765 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 823
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N + F
Sbjct: 824 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQEFHY 883
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
++Y R +++ +CT V P LL +I++ D E
Sbjct: 884 N----WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 926
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 157/231 (67%), Gaps = 21/231 (9%)
Query: 173 EKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+K +LR I + R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++
Sbjct: 191 KKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI 250
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVF 285
KG C+IVCTQPRRISA SVAER++ ER E G+ + GY+IRL+S+ K SI++
Sbjct: 251 ERGKGSACRIVCTQPRRISAISVAERVAAERAEXCGNGNSTGYQIRLQSRLPRKQGSILY 310
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++L+ L S +S+++HI++DEIHER+ SD ++ +++D+L
Sbjct: 311 CTTGIILQWLQSDPY--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLN 356
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 357 FRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 407
>gi|410971144|ref|XP_003992033.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1 [Felis
catus]
Length = 1012
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 299/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 466 LEMIDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFI 524
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 525 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 584
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 585 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 644
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 645 LQIKILRLG-GIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVE 703
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 704 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTKSD 759
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W++A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 760 HLTVVNAFEGWEDARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRN 819
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 820 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSV 878
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + + + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 879 NVEQTEFHYN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 930
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 182/279 (65%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ +++ + R K +D + + + E + + + L +K ++ R I +
Sbjct: 146 EDQEKKLINQEKRTFRIRDKYIDRDSEYLLQENEPDVTLDQQLLEDLQKKKSDPRYIEMQ 205
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 206 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 265
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L
Sbjct: 266 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL-- 323
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
Q SRL S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 324 QSDSRL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSA 371
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 372 TLNAEKFSEYFGNCPMIHIPGFTFPVAEYLLEDIIEKIR 410
>gi|291400034|ref|XP_002716350.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
[Oryctolagus cuniculus]
Length = 1004
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 318/560 (56%), Gaps = 64/560 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 458 LEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFL 516
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 517 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 576
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 577 NNISTMTAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 636
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 637 LQIKILRLG-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVE 695
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 696 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 751
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 752 HLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVNSRS 811
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V LHP S+
Sbjct: 812 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRVNLGKKRKMVKVYTKTDGLVALHPKSV 870
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
N ++TD + + +++ +CT V P LL +I++ D E
Sbjct: 871 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE---- 922
Query: 1007 DDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQ 1066
T+ VD W+ F S A
Sbjct: 923 -----------------------------------------TIAVDEWIVFQSPARIAHL 941
Query: 1067 IYCLRERLSVAILFKVTHPQ 1086
+ LR+ L + + K+ PQ
Sbjct: 942 VKELRKELDILLQEKIESPQ 961
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 158/231 (68%), Gaps = 21/231 (9%)
Query: 173 EKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+K +LR I + R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++
Sbjct: 186 KKKTDLRYIEMQQFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI 245
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVF 285
KG C+IVCTQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++
Sbjct: 246 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILY 305
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++L+ L S +S+++HI++DEIHER+ SD ++ +I+D+L
Sbjct: 306 CTTGIILQWLQSDP--------------HLSSVSHIVLDEIHERNLQSDVLMTVIKDLLN 351
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 352 FRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVAEYLLEDIIEKIR 402
>gi|240848573|ref|NP_082412.2| probable ATP-dependent RNA helicase DHX36 [Mus musculus]
gi|408360071|sp|Q8VHK9.2|DHX36_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DHX36; AltName:
Full=DEAH box protein 36; AltName: Full=MLE-like protein
1; AltName: Full=RNA helicase associated with AU-rich
element ARE
gi|148703437|gb|EDL35384.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36, isoform CRA_a [Mus
musculus]
Length = 1001
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 297/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 455 LQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFL 513
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 514 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 573
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 574 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 633
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 634 LQIKILRLG-GIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 692
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 693 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 748
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 749 HLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 808
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 809 PKD-PKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSV 867
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N ++TD + + +++ +CT V P LL +I++ D E
Sbjct: 868 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQE 919
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 153/217 (70%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + ++++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 197 RKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 256
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L Q
Sbjct: 257 PRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL--QS 314
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
SRL S+++HI++DEIHER+ SD ++ +I+D+L L++ILMSATL
Sbjct: 315 DSRL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATL 362
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 363 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 399
>gi|187950903|gb|AAI38062.1| Dhx36 protein [Mus musculus]
Length = 1000
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 297/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 454 LQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFL 512
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 513 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 572
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 573 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 632
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 633 LQIKILRLG-GIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 691
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 692 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 747
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 748 HLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 807
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 808 PKD-PKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSV 866
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N ++TD + + +++ +CT V P LL +I++ D E
Sbjct: 867 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQE 918
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 153/217 (70%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + ++++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 196 RKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 255
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L Q
Sbjct: 256 PRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL--QS 313
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
SRL S+++HI++DEIHER+ SD ++ +I+D+L L++ILMSATL
Sbjct: 314 DSRL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATL 361
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 362 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 398
>gi|17863988|gb|AAL47006.1|AF448804_1 DEAD/H box polypeptide 36 protein [Mus musculus]
Length = 1001
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 297/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 455 LQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFL 513
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 514 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 573
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 574 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 633
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 634 LQIKILRLG-GIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 692
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 693 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 748
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 749 HLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 808
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 809 PKD-PKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSV 867
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N ++TD + + +++ +CT V P LL +I++ D E
Sbjct: 868 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQE 919
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 153/217 (70%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + ++++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 197 RKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 256
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L Q
Sbjct: 257 PRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL--QS 314
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
SRL S+++HI++DEIHER+ SD ++ +I+D+L L++ILMSATL
Sbjct: 315 DSRL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATL 362
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 363 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 399
>gi|456753025|gb|JAA74079.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36 tv1 [Sus scrofa]
Length = 1012
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/468 (44%), Positives = 295/468 (63%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+IIPLHS++
Sbjct: 474 VDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFIIIPLHSLM 532
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 533 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 592
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 593 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 652
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 653 G-GIAYFLSRLMDPPSNEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 711
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 712 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELAK--DTKSDHLTVVNAF 767
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 768 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVRSRNPKDPES-N 826
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N + +
Sbjct: 827 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFH 886
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+ ++Y R +++ +CT V P LL +I++ D E
Sbjct: 887 YN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDSDQE 930
Score = 214 bits (544), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 178/279 (63%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ ++ + R K +D + + + E + + + L +K +LR I +
Sbjct: 146 ENQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDVTLDQQLLEDLQKKKTDLRYIEMQ 205
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 206 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 265
Query: 241 TQPRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 266 TQPRRISAISVAERVAAERAETCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 325
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +I+D+L P L+++LMSA
Sbjct: 326 DP--------------HLSSVSHILLDEIHERNLQSDVLMTVIKDLLSYRPDLKVVLMSA 371
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 372 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 410
>gi|387539358|gb|AFJ70306.1| putative ATP-dependent RNA helicase DHX36 isoform 1 [Macaca mulatta]
Length = 1008
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSTEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 763
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 764 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 822
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 823 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVN----VEQ 878
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 879 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 926
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 157/231 (67%), Gaps = 21/231 (9%)
Query: 173 EKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+K +LR I + R KLP + + + +D +QV +ISGETGCGKTTQV QF+L++
Sbjct: 190 KKKNDLRYIEMQHFREKLPSYGMQKELVNLIDKHQVTVISGETGCGKTTQVTQFILDNYI 249
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVF 285
KG C+IVCTQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++
Sbjct: 250 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILY 309
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++L+ L S +S+++HI++DEIHER+ SD ++ +++D+L
Sbjct: 310 CTTGIILQWLQSDPC--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLN 355
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 356 FRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 406
>gi|114589918|ref|XP_001147599.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 6 [Pan
troglodytes]
Length = 1008
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 763
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 764 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 822
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 823 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 878
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 879 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 926
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 323
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 324 Y--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
>gi|397512310|ref|XP_003826492.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36 [Pan paniscus]
Length = 1010
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 472 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 530
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 531 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 590
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 591 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 650
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 651 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 709
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 710 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 765
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 766 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 824
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 825 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 880
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 881 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 928
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 206 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 265
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 266 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 325
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 326 Y--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 371
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 372 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 408
>gi|296227769|ref|XP_002759520.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Callithrix jacchus]
Length = 1010
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/468 (43%), Positives = 295/468 (63%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 472 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 530
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 531 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 590
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 591 EWVSQANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 650
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 651 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 709
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 710 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 765
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
+ W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 766 KGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 824
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++RP R+ V+ T V +HP S+N ++
Sbjct: 825 INSDNEKIIKAVICAGLYPKVAKIRPNLGKKRKMVKVYTKTDGLVAIHPKSVN----VEQ 880
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT + P LL +I++ D E
Sbjct: 881 TDFHYNWLIYHLKMRTSSIYLYDCTEISPYCLLFFGGDISIQKDNDQE 928
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 206 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 265
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 266 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 325
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 326 --------------HLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 371
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 372 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 408
>gi|355683858|gb|AER97215.1| DEAH box polypeptide 36 [Mustela putorius furo]
Length = 1012
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 298/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 467 LEMMDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFL 525
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 526 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 585
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 586 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 645
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 646 LQIKILRLG-GIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVE 704
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 705 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTKSD 760
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 761 HLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRN 820
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 821 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKSDGLVAIHPKSV 879
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + + + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 880 NVEQTEFHYN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 931
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 181/279 (64%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK +Q +++ + R K +D + + + E + + + L +K ++LR I +
Sbjct: 147 ENQEKKLISQEKRTFRIRDKYMDRDSEYLLQENEPDVTLDQQLLEDLQKKKSDLRYIEMQ 206
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 207 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 266
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 267 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 326
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 327 DS--------------HLSSVSHIVLDEIHERNLQSDVLMTVIKDLLSFRPDLKVILMSA 372
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 373 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 411
>gi|402861178|ref|XP_003894981.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1 [Papio
anubis]
gi|355746955|gb|EHH51569.1| hypothetical protein EGM_10971 [Macaca fascicularis]
Length = 1008
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 763
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 764 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 822
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 823 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVN----VEQ 878
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 879 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 926
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 150/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D +QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDKHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 323
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 324 C--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 406
>gi|344257081|gb|EGW13185.1| putative ATP-dependent RNA helicase DHX36 [Cricetulus griseus]
Length = 922
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/469 (43%), Positives = 295/469 (62%), Gaps = 19/469 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 376 LERMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFI 434
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 435 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 494
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 495 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 554
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 555 LQIKILRLG-GIAYFLSRLMDPPSNEAVMLSIKHLMELSALDKQEELTPLGVHLARLPVE 613
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 614 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 669
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 670 HLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 729
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 730 PKD-PKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSV 788
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
N ++TD + + +++ +CT V P LL +I++
Sbjct: 789 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISI 833
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 153/217 (70%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + ++++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 118 RKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 177
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L Q
Sbjct: 178 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL--QS 235
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
SRL S+++HI++DEIHER+ SD ++ II+D+L L++ILMSATL
Sbjct: 236 DSRL------------SSVSHIVLDEIHERNLQSDVLMTIIKDLLNFRSDLKVILMSATL 283
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 284 NAEKFSEYFGDCPMIHIPGFTFPVVEYLLEDIIEKIR 320
>gi|167830433|ref|NP_065916.2| probable ATP-dependent RNA helicase DHX36 isoform 1 [Homo sapiens]
gi|313104099|sp|Q9H2U1.2|DHX36_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DHX36; AltName:
Full=DEAH box protein 36; AltName: Full=MLE-like protein
1; AltName: Full=RNA helicase associated with AU-rich
element ARE
gi|119599167|gb|EAW78761.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36, isoform CRA_a [Homo
sapiens]
gi|189069381|dbj|BAG37047.1| unnamed protein product [Homo sapiens]
Length = 1008
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 763
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 764 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 822
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 823 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 878
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 879 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 926
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 323
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 324 Y--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
>gi|301778665|ref|XP_002924750.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform 1
[Ailuropoda melanoleuca]
Length = 1009
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 298/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ E +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 463 LEMMDDEKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFL 521
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 522 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 581
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVS+A+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 582 NNISTMSAEWVSQANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 641
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 642 LQIKILRLG-GIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVE 700
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 701 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTKSD 756
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 757 HLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRN 816
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 817 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSV 875
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + + + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 876 NVEQTEFHYN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 927
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 181/279 (64%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK +Q +++ + R K +D + + + E + + + L +K ++LR I +
Sbjct: 143 ENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVTLDQQLLEDLQKKKSDLRYIEMQ 202
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 203 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 262
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 263 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 322
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 323 DS--------------HLSSVSHIVLDEIHERNLQSDVLMTVIKDLLSFRPDLKVILMSA 368
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 369 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 407
>gi|355559931|gb|EHH16659.1| hypothetical protein EGK_11982 [Macaca mulatta]
Length = 1008
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSTEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 763
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 764 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 822
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 823 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVN----VEQ 878
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 879 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 926
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 148/231 (64%), Gaps = 21/231 (9%)
Query: 173 EKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+K +LR I + R KLP + + + +D +QV +ISGETGCGKTTQV QF+L++
Sbjct: 190 KKKNDLRYIEMQHFREKLPSYGMQKELVNLIDKHQVTVISGETGCGKTTQVTQFILDNYI 249
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVF 285
KG C+IVCTQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++
Sbjct: 250 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILY 309
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++L+ L S +S+++HI+ D ++ +++D+L
Sbjct: 310 CTTGIILQWLQSDPC--------------LSSVSHIVXXXXXXXXXXXDVLMTVVKDLLN 355
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 356 FRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 406
>gi|11526793|gb|AAG36783.1| MLEL1 protein [Homo sapiens]
gi|40644063|emb|CAE11802.1| putative DExH/D RNA helicase [Homo sapiens]
Length = 1008
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 763
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 764 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 822
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 823 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 878
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 879 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 926
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 323
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 324 Y--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
>gi|431915209|gb|ELK15896.1| Putative ATP-dependent RNA helicase DHX36 [Pteropus alecto]
Length = 1007
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/507 (41%), Positives = 308/507 (60%), Gaps = 28/507 (5%)
Query: 504 QENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGA 563
+E P+ + + K + D MK DK +DL LI L+R I ++ EDGA
Sbjct: 439 KERWPDYVRELGKRYSASTVDVMKMMDDDK---------VDLNLIAALIRHIVLEEEDGA 489
Query: 564 ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIIL 623
ILVFLPGW++I+ D L++ F+ + KF+IIPLHS++P+V Q +VFKR PPG RKI++
Sbjct: 490 ILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVI 548
Query: 624 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAG 683
+TNIAET+ITIDDVV+VID G++KE +D NN+ST+ + WVS+A+AKQR GRAGR Q G
Sbjct: 549 ATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPG 608
Query: 684 ICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIR 743
CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L I FL + +DPP + +
Sbjct: 609 HCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLG-GIAHFLSRLMDPPSNEAVS 667
Query: 744 NAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYR 803
+I L ++ AL E++T LG L L V P + KM+ F L CLDP LT+A + ++
Sbjct: 668 LSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK 727
Query: 804 DPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQY 861
DPF +P+ ++K A + + ELA +SD L V+ AFE W+ A++RG E +C +Y
Sbjct: 728 DPFVIPLG--KEKVADSRRKELAK--DSKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEY 783
Query: 862 FVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
F+SS + ML M+ Q L+ GF+ P+D S + N+ II AV+ AGLYP V
Sbjct: 784 FLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKS-NINSDNEKIIKAVICAGLYPKV 842
Query: 918 ARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
A++R R+ V+ T V +HP S+N + + + ++Y R +++
Sbjct: 843 AKIRLNLGKKRKMVKVYTKSDGLVAIHPKSVNVEQTEFHYN---WLIYHLKMRT-SSIYL 898
Query: 976 RNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+CT V P LL +I++ D E
Sbjct: 899 YDCTEVSPYCLLFFGGDISIQKDNDQE 925
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 178/279 (63%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ ++ + R K +D + + + E + + + L +K ++LR I +
Sbjct: 141 ENQEKKSINQEKRPFRIRDKYIDRDSEYLLQENEPDVTLDQQLLEDLQKKKSDLRYIEMQ 200
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 201 HFREKLPSFGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSVCRIVC 260
Query: 241 TQPRRISATSVAERISVERGE--NIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E G++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 261 TQPRRISAISVAERVAAERAEPCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 320
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +I+D+L L++ILMSA
Sbjct: 321 DP--------------HLSSVSHIVLDEIHERNLQSDVLMTVIKDLLSIRRDLKVILMSA 366
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 367 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 405
>gi|281344866|gb|EFB20450.1| hypothetical protein PANDA_014147 [Ailuropoda melanoleuca]
Length = 926
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 298/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ E +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 380 LEMMDDEKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFL 438
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 439 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 498
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVS+A+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 499 NNISTMSAEWVSQANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 558
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 559 LQIKILRLG-GIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVE 617
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 618 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTKSD 673
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 674 HLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRN 733
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 734 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSV 792
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + + + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 793 NVEQTEFHYN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 844
Score = 214 bits (545), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 181/279 (64%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK +Q +++ + R K +D + + + E + + + L +K ++LR I +
Sbjct: 60 ENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVTLDQQLLEDLQKKKSDLRYIEMQ 119
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 120 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 179
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 180 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 239
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 240 DS--------------HLSSVSHIVLDEIHERNLQSDVLMTVIKDLLSFRPDLKVILMSA 285
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 286 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 324
>gi|157818387|ref|NP_001101148.1| probable ATP-dependent RNA helicase DHX36 [Rattus norvegicus]
gi|149064669|gb|EDM14820.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 1000
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/476 (43%), Positives = 296/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 454 LEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFL 512
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 513 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 572
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 573 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 632
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 633 LQIKILRLG-GIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 691
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 692 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 747
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 748 HLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 807
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 808 PKD-PKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSV 866
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N ++TD + + +++ +CT V P LL +I++ D E
Sbjct: 867 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQE 918
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 153/217 (70%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQ 242
R KLP + + + ++++QV +ISGETGCGKTTQV QF+L++ +G C+IVCTQ
Sbjct: 196 RKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIGSACRIVCTQ 255
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L Q
Sbjct: 256 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL--QS 313
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
SRL S+++HI++DEIHER+ SD ++ +I+D+L L++ILMSATL
Sbjct: 314 DSRL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATL 361
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 362 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 398
>gi|73990731|ref|XP_534311.2| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2 [Canis
lupus familiaris]
Length = 1002
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/507 (41%), Positives = 309/507 (60%), Gaps = 28/507 (5%)
Query: 504 QENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGA 563
+E P+ + ++K + D M+ ++ + +DL LI L+R I ++ EDGA
Sbjct: 434 KERWPDYVRELRKRYSASTVDVME---------MIDDDKVDLNLIAALIRHIVLEEEDGA 484
Query: 564 ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIIL 623
ILVFLPGW++I+ D L++ F+ + +F+IIPLHS++P+V Q +VFK+ PPG RKI++
Sbjct: 485 ILVFLPGWDNISTLHDLLMSQVMFK-SDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVI 543
Query: 624 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAG 683
+TNIAET+ITIDDVVYVID G++KE +D NN+ST+ + WVSKA+AKQR GRAGR Q G
Sbjct: 544 ATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPG 603
Query: 684 ICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIR 743
CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L I FL + +DPP +
Sbjct: 604 HCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLG-GIAYFLSRLMDPPSDEAVS 662
Query: 744 NAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYR 803
+I L ++ AL E++T LG L L V P + KM+ F L CLDP LT+A + ++
Sbjct: 663 LSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK 722
Query: 804 DPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQY 861
DPF +P+ ++K A A + ELA +SD L V+ AFE W+ A++RG E +C +Y
Sbjct: 723 DPFVIPLG--KEKIADARRKELAK--DTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEY 778
Query: 862 FVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
F+SS + ML M+ Q L+ GF+ P+D S + N+ II AV+ AGLYP V
Sbjct: 779 FLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKS-NINSDNEKIIKAVICAGLYPKV 837
Query: 918 ARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
A++R R+ V+ T V +HP S+N + + + ++Y R +++
Sbjct: 838 AKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYN---WLIYHLKMRT-SSIYL 893
Query: 976 RNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+CT V P LL +I++ D E
Sbjct: 894 YDCTEVSPYCLLFFGGDISIQKDNDQE 920
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 181/279 (64%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK +Q +++ + R K +D + + + E +A+ + L +K ++LR I +
Sbjct: 136 ENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVALDQQLLEDLRKKKSDLRYIEMQ 195
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L+ KG C+IVC
Sbjct: 196 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVC 255
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 256 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 315
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 316 DS--------------HLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSA 361
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 362 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 400
>gi|354491883|ref|XP_003508083.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Cricetulus
griseus]
Length = 958
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/469 (43%), Positives = 295/469 (62%), Gaps = 19/469 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 412 LERMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFI 470
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 471 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 530
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 531 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 590
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 591 LQIKILRLG-GIAYFLSRLMDPPSNEAVMLSIKHLMELSALDKQEELTPLGVHLARLPVE 649
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 650 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 705
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 706 HLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 765
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 766 PKD-PKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSV 824
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
N ++TD + + +++ +CT V P LL +I++
Sbjct: 825 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISI 869
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 153/217 (70%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + ++++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 154 RKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 213
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L Q
Sbjct: 214 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL--QS 271
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
SRL S+++HI++DEIHER+ SD ++ II+D+L L++ILMSATL
Sbjct: 272 DSRL------------SSVSHIVLDEIHERNLQSDVLMTIIKDLLNFRSDLKVILMSATL 319
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 320 NAEKFSEYFGDCPMIHIPGFTFPVVEYLLEDIIEKIR 356
>gi|7959237|dbj|BAA96012.1| KIAA1488 protein [Homo sapiens]
Length = 852
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 314 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 372
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 373 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 432
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 433 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 492
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 493 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 551
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 552 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 607
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 608 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 666
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 667 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 722
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 723 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 770
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 158/231 (68%), Gaps = 21/231 (9%)
Query: 173 EKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+K +LR I + R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++
Sbjct: 34 KKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI 93
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVF 285
KG C+IVCTQPRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++
Sbjct: 94 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILY 153
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++L+ L S +S+++HI++DEIHER+ SD ++ +++D+L
Sbjct: 154 CTTGIILQWLQSDPY--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLN 199
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 200 FRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 250
>gi|343959540|dbj|BAK63627.1| probable ATP-dependent RNA helicase DHX36 [Pan troglodytes]
Length = 644
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/468 (44%), Positives = 295/468 (63%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 106 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 164
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 165 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 224
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 225 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 284
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 285 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 343
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 344 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 399
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 400 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 458
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 459 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 514
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LLL +I++ D E
Sbjct: 515 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLLFGGDISIQKDNDQE 562
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%)
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 1 MSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 42
>gi|12850145|dbj|BAB28610.1| unnamed protein product [Mus musculus]
Length = 681
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 297/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 135 LQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFL 193
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 194 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 253
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 254 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 313
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 314 LQIKILRLG-GIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 372
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 373 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 428
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 429 HLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 488
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 489 PKD-PKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSV 547
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N ++TD + + +++ +CT V P LL +I++ D E
Sbjct: 548 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQE 599
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 63/79 (79%)
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVP 377
++HI++DEIHER+ SD ++ +I+D+L L++ILMSATL+A++FS+YFG CP+I +P
Sbjct: 1 VSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIP 60
Query: 378 GFTYPVKSFYLEDVLSILK 396
GFT+PV + LED++ ++
Sbjct: 61 GFTFPVVEYLLEDIIEKIR 79
>gi|338714877|ref|XP_001489021.3| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Equus
caballus]
Length = 1058
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/468 (44%), Positives = 293/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I + EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 520 VDLNLIAALIRYIVLKEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 578
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D NN+ST+ +
Sbjct: 579 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSA 638
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 639 EWVSKANAKQRRGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 698
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 699 G-GIACFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 757
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 758 FGALFCCLDPVLTIAASLSFKDPFVIPL--GKEKIADARRKELAK--DTKSDHLTVVNAF 813
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 814 EGWEEARRRGFRHEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRDPKDPES-N 872
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA+LR R+ V+ T V LHP S+N + +
Sbjct: 873 VNSDNEKIIKAVICAGLYPKVAKLRLNLGKKRKMVKVYTKTDGLVALHPKSVNVEQTEFH 932
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+ ++Y R +++ +CT V P LL +I++ D E
Sbjct: 933 YN---WLIYHLKMR-TSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQE 976
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 177/279 (63%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEI-AMKVESLTSRIEKDANLRQIVEE- 184
E EK NQ +++ + R + +D + + E A + L ++K R+ +E
Sbjct: 192 EDQEKKLINQEKQTFRIRDRYIDRDSEYLFQENEPDATLDQQLLEDLQKKKTDRRYIEMQ 251
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 252 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNCIERGKGSACRIVC 311
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 312 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 371
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +++ +L P L++ILMSA
Sbjct: 372 D--------------PHLSSVSHIVLDEIHERNLQSDVLMTVVKGLLNFRPDLKVILMSA 417
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 418 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 456
>gi|327266972|ref|XP_003218277.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Anolis
carolinensis]
Length = 814
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/512 (41%), Positives = 308/512 (60%), Gaps = 33/512 (6%)
Query: 504 QENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGA 563
QE P+ + I+ + D+++ DK IDL L+ L++ I ++ E+GA
Sbjct: 246 QERWPDYLRQIRGRYSESTIDALEMMDDDK---------IDLNLVAALIKYIALEEEEGA 296
Query: 564 ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIIL 623
ILVFLPGW++I+ D L++ F+ + +F+IIPLHS++P+V Q +VFKR PPG RKI++
Sbjct: 297 ILVFLPGWDNISTLHDLLMSQIMFK-SDRFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVI 355
Query: 624 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAG 683
+TNIAET+ITIDDVVYVID G++KE +D NN+ST+ + WVS A+AKQR GRAGR Q G
Sbjct: 356 ATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMAAEWVSIANAKQRKGRAGRVQPG 415
Query: 684 ICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIR 743
CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L I FL K +DPP S +
Sbjct: 416 QCYHLYNGLRASLLEDYQLPEILRTPLEELCLQIKILKLG-GIAHFLSKVMDPPSSDMVL 474
Query: 744 NAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYR 803
AI L + AL E++T LG L L V P + KM+ F L CLDP LT+A + ++
Sbjct: 475 LAIKHLMQLNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK 534
Query: 804 DPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQY 861
DPF +P+ ++K A A + EL+ +SD L V+ AF+ W+ ++RG E FC +Y
Sbjct: 535 DPFVIPLG--KEKVADARRKELSK--NSKSDHLTVVNAFQGWEETRRRGFRYEKDFCWEY 590
Query: 862 FVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
F+SS + ML M+ Q L+ GF+ P+D S + N+ ++ AV+ AGLYP V
Sbjct: 591 FLSSNTLQMLANMKGQFAEHLLAAGFVNSRNPKDPKS-NINSDNEKLLKAVICAGLYPKV 649
Query: 918 ARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
A++R R+ V+ T V +HP S+N + + +VY R +++
Sbjct: 650 AKIRANFSKKRKMVKVSTKTDGSVNIHPKSVNVE---ETEFHYNWLVYHLKMRT-SSIYL 705
Query: 976 RNCTVVGPLPLLLLATEIAVAPAPDNEDDDED 1007
+CT V P LL +I++ +D D+D
Sbjct: 706 YDCTEVSPYCLLFFGGDISI-----QKDKDQD 732
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 82/123 (66%), Gaps = 14/123 (11%)
Query: 279 KHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLA 338
+ SI++CT G++L+ L S +S+++HII+DEIHER+ SD ++
Sbjct: 109 RQGSILYCTTGIVLQWLQSDKY--------------LSSVSHIILDEIHERNLQSDVLIT 154
Query: 339 IIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSA 398
II+D+L L++ILMSATL+A++FS+YF CP+I +PGFTYPVK + LEDV+ +L+
Sbjct: 155 IIKDLLSIRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTYPVKEYLLEDVIEMLRYI 214
Query: 399 ESN 401
N
Sbjct: 215 PEN 217
>gi|355729599|gb|AES09922.1| YTH domain containing 2 [Mustela putorius furo]
Length = 824
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/586 (37%), Positives = 329/586 (56%), Gaps = 51/586 (8%)
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMV 602
L LI LL IC + GAIL+FLPG+++I RDR+L + F +T ++ + LHS +
Sbjct: 1 LDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNM 60
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
+ QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+
Sbjct: 61 QTSDQKKVLKTPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKM 120
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P
Sbjct: 121 VWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAP 180
Query: 723 -NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+
Sbjct: 181 VNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMV 240
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A+++ CLDP LT+AC YRDPF LP ++K+ A + + G SD +A++ A
Sbjct: 241 LCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRA 298
Query: 842 FECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSH 897
F+ W+ A+ G E FC + F+S M +++GMR QL +L +GF+ D+ +
Sbjct: 299 FQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNT 358
Query: 898 NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK-- 954
N+ ++ A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 359 NSENWAVVKAALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIP 413
Query: 955 -------------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDN 1001
TD ++YDE+TR ++R C+ V P+ +L+ P
Sbjct: 414 PANGQAAAIQALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFC-------GPAR 463
Query: 1002 EDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTA 1061
+ + S AD +D E++D+T+ + +D WL F
Sbjct: 464 LASNALQEPSSFRADGIPNDSSDSEMEDRTTANLA-----------ALKLDEWLNFKLEP 512
Query: 1062 LDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
+ + LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 513 EAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 558
>gi|348534749|ref|XP_003454864.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Oreochromis niloticus]
Length = 1064
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/471 (44%), Positives = 292/471 (61%), Gaps = 21/471 (4%)
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
E IDL LI L+R I ++ E+GAILVFLPGW++I+ D L+A FR + +FVIIPLHS
Sbjct: 508 EKIDLDLILALIRYIVLNEEEGAILVFLPGWDNISTLNDLLMAQQMFR-SDRFVIIPLHS 566
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
++P+V Q +VFKRPPPG RKI+++TNIAET+ITIDDVVYVID G++KE ++D NN+ST+
Sbjct: 567 LMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETNFDTSNNISTM 626
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
+ WVS A+AKQR GRAGR G CYHLY+ LRA+ L +Q+PEI R P+EELCLQ+K+L
Sbjct: 627 MAEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKIL 686
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
+I FL+K LD P + AI L ++ AL E +T LG L L V P + K+
Sbjct: 687 KLG-SIGRFLEKALDRPTEQAVSLAIKNLTELNALDQRENLTALGFHLARLPVEPHIGKL 745
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ F L+ CLDP LT+A + ++DPF +P+ ++K A + L+ +SD L ++
Sbjct: 746 ILFGALLGCLDPVLTIAASLSFKDPFFIPLG--KEKMADMRRKVLSK--NSKSDHLTIVN 801
Query: 841 AFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSS 894
AF+ W++AKQRG E FC F+S+ + ML M+ Q L+ GF+ P+D S
Sbjct: 802 AFQGWEDAKQRGGRYEREFCWDNFLSANTLQMLQNMKGQFAEHLMHAGFVSSKDPKDPKS 861
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNF-KLS 951
+ N+ +I AV++AGLYP VA +RP H R V+ T KV +HP S+N +
Sbjct: 862 -NVNSGNEKLIKAVIVAGLYPKVAMIRPSHSKKRPGVKVYTQADGKVCIHPKSVNAEETE 920
Query: 952 FKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
F T ++Y R + + +CT V P LL +I + D E
Sbjct: 921 FNYT----WLIYHLKMR-TSSIFLYDCTEVSPFSLLFFGGDITIQKDEDQE 966
Score = 209 bits (533), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 162/233 (69%), Gaps = 19/233 (8%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG- 233
DA +++++ R KLP K+ + + ++SN+V+++SGETGCGKTTQV QF+L+ ++G
Sbjct: 233 DAKYKEMLKFREKLPSYGKKEELVTLINSNRVLVVSGETGCGKTTQVTQFILDDYINRGM 292
Query: 234 -ETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNG 289
C++VCTQPRRISA SVAER++ ER E++G+ + GY+IRL+S+ + SI++CT G
Sbjct: 293 GSMCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTG 352
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
++L+ L S + +S+++H+++DEIHER+ SD +L I++D+L
Sbjct: 353 IILQWLRSDPL--------------LSSISHLVLDEIHERNLQSDVLLIIVKDLLNLRDD 398
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
L++ILMSATL+A++FSQYF CP+I +PG T+PV+ F LED++ + + N
Sbjct: 399 LKIILMSATLNAEKFSQYFDNCPMIHIPGLTFPVEEFLLEDIIEMTRYRPQNQ 451
>gi|403265717|ref|XP_003925063.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1011
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/468 (43%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 473 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 531
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 532 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 591
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 592 EWVSQANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 651
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 652 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 710
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 711 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 766
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
+ W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 767 KGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 825
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 826 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVSVHPKSVN----VEQ 881
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT + P LL +I++ D E
Sbjct: 882 TDFHYNWLIYHLKMRTSSIYLYDCTEISPYCLLFFGGDISIQKDNDQE 929
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 177/302 (58%), Gaps = 41/302 (13%)
Query: 122 PPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPK-----MSKAEIAMKVESLTSRIEKDA 176
P D G E N R K + + + K +K+ I E L E D
Sbjct: 122 PEDHGYGAEVSTKNTPRSEKKLDNQETKLINQEKKVFRIRNKSYIDRDSEYLLQENEPDG 181
Query: 177 NL-RQIVEE----------------RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTT 219
L +Q++E+ R KLP + + + +D++QV +ISGETGCGKTT
Sbjct: 182 TLDQQLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTT 241
Query: 220 QVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLES 275
QV QF+L++ KG C+IVCTQPRRISA SVAER++ ER E+ G+ + GY+IRL+S
Sbjct: 242 QVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS 301
Query: 276 K-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+ K SI++CT G++L+ L S +S+++HII+DEIHER+ SD
Sbjct: 302 RLPRKQGSILYCTTGIILQWLQSDP--------------HLSSVSHIILDEIHERNLQSD 347
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++ +++D+L L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LED++
Sbjct: 348 VLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 407
Query: 395 LK 396
++
Sbjct: 408 IR 409
>gi|363737298|ref|XP_422834.3| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Gallus gallus]
Length = 995
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/481 (42%), Positives = 299/481 (62%), Gaps = 24/481 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 449 LEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFI 507
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D
Sbjct: 508 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQ 567
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 568 NNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 627
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL K +DPP + AI L ++ AL E++T LG L L V
Sbjct: 628 LQIKILKLG-GIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVE 686
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + EL+ +SD
Sbjct: 687 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELSK--NTKSD 742
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AF W+ ++RG E +C +YF+S + ML M+ Q L+ GF+
Sbjct: 743 HLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRD 802
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ ++ AV+ AGLYP VA++RP R+ V+ T V +HP S+
Sbjct: 803 PKDPKSNT-NSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSV 861
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
N + + + +VY R +++ +CT V P LL +I++ +D D+
Sbjct: 862 NVEETEFHYN---WLVYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISI-----QKDKDQ 912
Query: 1007 D 1007
D
Sbjct: 913 D 913
Score = 209 bits (532), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 177/287 (61%), Gaps = 41/287 (14%)
Query: 137 SRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE------------ 184
+ K++K KR +P + K + VE L + ++DA+L + ++E
Sbjct: 131 AEKAEKAPVKR-----RPILQKTFLDQDVEYLFEKNDQDADLDEQLKEDLRKKKSDPRYI 185
Query: 185 -----RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCK 237
R KLP + + + +++N+V +ISGETGCGKTTQV QF+L+ KG TC+
Sbjct: 186 EMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCR 245
Query: 238 IVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRL 294
IVCTQPRRISA SVAER++ ER E G+ + GY+IRL+S+ K SI++CT G++L+
Sbjct: 246 IVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQW 305
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L S +S+++H+++DEIHER+ SD +++II+D+L L++IL
Sbjct: 306 LQSD--------------KHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVIL 351
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESN 401
MSATL+A++FS+YF CP+I +PGFT+PV + LEDV+ L+ N
Sbjct: 352 MSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRYTPEN 398
>gi|426342588|ref|XP_004037921.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Gorilla
gorilla gorilla]
Length = 647
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 109 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 167
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 168 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 227
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 228 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 287
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 288 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 346
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 347 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 402
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 403 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 461
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 462 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 517
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 518 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 565
>gi|256081513|ref|XP_002577014.1| ATP-dependent RNA Helicase [Schistosoma mansoni]
gi|353229477|emb|CCD75648.1| putative atp-dependent RNA helicase [Schistosoma mansoni]
Length = 1006
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 273/897 (30%), Positives = 419/897 (46%), Gaps = 209/897 (23%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKG 233
A ++ E R KLP FK+ I ST+ NQVV+ISGETGCGKTTQVPQF+LE + G
Sbjct: 164 AAYMKMSESRCKLPAYQFKEDIVSTIRDNQVVIISGETGCGKTTQVPQFILEDQVLGGNG 223
Query: 234 ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK--HSSIVFCTNGVL 291
+I+ TQPRRISA S+AER++ ERG+++G ++GY++RLE + + H SI+FCT G++
Sbjct: 224 SVTRIIVTQPRRISAVSIAERVATERGQSVGSSVGYQVRLERRYPQRPHGSIMFCTTGII 283
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
L+ S + + ++HIIVDE+HER+ DF+L +++ + P P LR
Sbjct: 284 LQWFRSDPL--------------LKNISHIIVDEVHEREFLCDFLLCMLKRIAPLRPDLR 329
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVP 411
++LMSAT++AD+F +YF CP ++PG T+PVK++YLEDVL K N +A
Sbjct: 330 IVLMSATINADKFVEYFDNCPKFEIPGRTFPVKTYYLEDVLRETKFWLPNSAITA----- 384
Query: 412 NEDPELTEENKSTLDEAISLA-WSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLA 470
L + TL + + + S E +L S SP + H+LTGL+
Sbjct: 385 -----LCRDQSRTLKQRLLKSNLSKKEARIL----SYGKSPEFNKWLHSLTGLSS----- 430
Query: 471 GKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQL 530
+ +L S+G D K +I +E+ L + +
Sbjct: 431 -----NAIEILRSVGEDTYPK-------------------TDLIAHSVEHILQSTQSGAI 466
Query: 531 LDKYLATVNPELIDLVLIEQLLRKIC---MDSEDGAILVFLPGWEDINKTRDRLLANPFF 587
L P L+D+ + + LR++ D+ G++ ++
Sbjct: 467 L-----VFVPGLVDIKDVIRCLRELNPRRYDNRYGSVRIY-------------------- 501
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
PLHS +P+ + + +F+ P RK++++TNIAET+ITI DVVYVID GR+K
Sbjct: 502 ---------PLHSRIPTSRDRSLFEPSPKNQRKVVIATNIAETSITIQDVVYVIDCGRIK 552
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIK 706
YDP N STL + VSKA+A QR+GRAGR Q GICYHL+ S + + DF PE+
Sbjct: 553 VTDYDPRQNTSTLTAILVSKANAAQRSGRAGRVQPGICYHLFPSYVYNNVMSDFLQPEML 612
Query: 707 RIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT---- 762
R+ +E++ L++KLL ++ FL LD P I +I L+ I AL L E T
Sbjct: 613 RVRLEDVILRIKLLGLG-RVKSFLTNCLDSPSEDAISKTLIFLRQIQALKLIESETSNFN 671
Query: 763 -------------------------------------------------ELGEKLGCLSV 773
E ++L L V
Sbjct: 672 TSHSIKSRGQSHKLNRKSLREFSEAIKKDVNASGINILGSSCIHLDSTDEDDDELTPLGV 731
Query: 774 H-------PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
H P +K+L F L CL+P L +A +RDPF +P+ +++ A + EL+
Sbjct: 732 HLANFPLDPQCAKLLIFGALFGCLEPILAVASCLTFRDPFEVPL--EKQQEADRCRKELS 789
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD + + + + FC +YF+
Sbjct: 790 Q--NSFSDHWVFATVIQSYNGLNSQIERHQFCQRYFL----------------------- 824
Query: 887 FIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH-KNGR----RFVETAGGAKVRL 941
N R + A++ A LYP V ++ P K G+ + + +
Sbjct: 825 -----------NERNINLFRAIMCAALYPNVVKVDPRFTKEGKPKTSVIMACPSEGRANI 873
Query: 942 HPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH--VRNCTVVGPLPLLLLATEIAVA 996
HP S+N K+ + + MVY T+ + G + + + TV+ PLL + I ++
Sbjct: 874 HPSSVNSKI---QPTEPIWMVYFTKTKLESGSYPSIFDSTVISLRPLLFFSGNIEIS 927
>gi|326926269|ref|XP_003209325.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Meleagris
gallopavo]
Length = 887
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/481 (42%), Positives = 299/481 (62%), Gaps = 24/481 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 341 LEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISSLHDLLMSQVMFK-SDRFI 399
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D
Sbjct: 400 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQ 459
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 460 NNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 519
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL K +DPP + AI L ++ AL E++T LG L L V
Sbjct: 520 LQIKILKLG-GIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVE 578
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + EL+ +SD
Sbjct: 579 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELSK--NTKSD 634
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AF W+ ++RG E +C +YF+S + ML M+ Q L+ GF+
Sbjct: 635 HLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRD 694
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ ++ AV+ AGLYP VA++RP R+ V+ T V +HP S+
Sbjct: 695 PKDPKSNT-NSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSV 753
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
N + + + +VY R +++ +CT V P LL +I++ +D D+
Sbjct: 754 NVEETEFHYN---WLVYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISI-----QKDKDQ 804
Query: 1007 D 1007
D
Sbjct: 805 D 805
Score = 209 bits (532), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 177/287 (61%), Gaps = 41/287 (14%)
Query: 137 SRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE------------ 184
+ K++K KR +P + K + VE L + ++DA+L + ++E
Sbjct: 23 AEKAEKAPVKR-----RPVLEKTFLDQDVEYLFEKSDQDADLDEQLKEDLRKKKSDPRYI 77
Query: 185 -----RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCK 237
R KLP + + + +++N+V +ISGETGCGKTTQV QF+L+ KG TC+
Sbjct: 78 EMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCR 137
Query: 238 IVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRL 294
IVCTQPRRISA SVAER++ ER E G+ + GY+IRL+S+ K SI++CT G++L+
Sbjct: 138 IVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQW 197
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L S +S+++H+++DEIHER+ SD +++II+D+L L++IL
Sbjct: 198 LQSDK--------------HLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVIL 243
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESN 401
MSATL+A++FS+YF CP+I +PGFT+PV + LEDV+ L+ N
Sbjct: 244 MSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRYTPEN 290
>gi|328766643|gb|EGF76696.1| hypothetical protein BATDEDRAFT_567 [Batrachochytrium dendrobatidis
JAM81]
Length = 764
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 243/784 (30%), Positives = 401/784 (51%), Gaps = 118/784 (15%)
Query: 170 SRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
S+ + D+ + R KLP +++KD I + S+ +++ GETGCGK+TQV QF+LE
Sbjct: 6 SKKQVDSAFLHMQSIRRKLPSANYKDQICKALSSSNALVLCGETGCGKSTQVGQFILEDC 65
Query: 230 WSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
KG C I+CTQPR++SA ++++R++ ER E +GD +GY +R ++ ++ ++FCT
Sbjct: 66 IDKGIAYKCNIICTQPRKLSAIALSKRVADERCETVGDMVGYAVRGDTSRSDNTRLMFCT 125
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR+L+ ++ ++H+IVDE+HER SDF+L ++RD+L
Sbjct: 126 TGILLRMLLGDPT--------------LTGISHVIVDEVHERSVESDFLLILLRDLLQKK 171
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSAS 407
LR+ILMSAT++AD FS YF C V+ +PGFTYPV +LE++L ++
Sbjct: 172 SSLRVILMSATINADTFSSYF-LCSVMTIPGFTYPVTDLHLENILGMIDYI--------- 221
Query: 408 LIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLM 467
P+L ++ S+ EA + +D+ +G +++++ G+ +
Sbjct: 222 -------PDLPKQKSSSRKEASQIDLKSDQ----------DGFDDMWSHHDLSDGIKNAL 264
Query: 468 VLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK 527
+A + ++ L++ + V+ I K H + A+
Sbjct: 265 AIAERNKL-----------------------LRIDHKLIAATVSYICKNHDDGAI----- 296
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF 587
LI L + + R CMD+ +D++ + L
Sbjct: 297 --------------LIFLPGVSDIKR--CMDTLK----------QDVSLKNENL------ 324
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
I PLH+ + + +Q K+F+ RKI+++TNIAET+ITIDDVV+VIDSG++K
Sbjct: 325 ------CIYPLHANLTNTEQSKIFRPTRRSERKIVIATNIAETSITIDDVVFVIDSGKVK 378
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIK 706
E + N V TL +W S+A+ KQR GRAGR ++G C+ L+ S + + F PEI
Sbjct: 379 EITL--RNEVVTLSETWCSQAACKQRRGRAGRVKSGYCFKLFTSHFEKSRMNPFPEPEIL 436
Query: 707 RIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766
+ P+E+LCLQ++ ++ +I +FL K + PP + AI L+ I AL E +T LG+
Sbjct: 437 QTPLEQLCLQIRAMNVQ-DITNFLFKAITPPPIEMVHRAIDFLKTINALDEHENLTNLGK 495
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
+ + +SKML F + C+ P LT+A + PF P ++ AT + + +
Sbjct: 496 HMSAIPADVRLSKMLLFGAIFQCVGPILTIAACLSEKSPFIFPSDSQDQSEATKIRKQFS 555
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
G+SD L F+ W Q FCS+ ++S + + R Q + L+ G
Sbjct: 556 D---GESDLLTACKVFDEWVQLPT-SQRRDFCSKNYLSHTNLENIADRRLQFRDILVDIG 611
Query: 887 FIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE-TAGGAKVRLHPHS 945
++ + S P I+ AV++AGLYP +AR+R P K + T + +HP S
Sbjct: 612 YLEFKEYNVSSTVADPNIVKAVIVAGLYPNIARIRFPEKQYEQIAHGTVAIDSLFIHPSS 671
Query: 946 LNFK 949
+NF+
Sbjct: 672 INFE 675
>gi|432891825|ref|XP_004075666.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Oryzias
latipes]
Length = 1050
Score = 369 bits (947), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 203/468 (43%), Positives = 289/468 (61%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
IDL LI L+ I E+GAILVFLPGW++I+ D L+A FR + +FVIIPLHS++
Sbjct: 500 IDLELILALICHIVRSEEEGAILVFLPGWDNISGLNDLLMAQTMFR-SDRFVIIPLHSLM 558
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKRPPPG RKI+++TNIAET+ITIDDVVYVID G++KE ++D NN+ST+ +
Sbjct: 559 PTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETNFDTNNNISTMTA 618
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS A+AKQR GRAGR G CYHLY+ LRA+ L +Q+PEI R P+EELCLQ+K+L
Sbjct: 619 EWVSLANAKQRKGRAGRVCPGKCYHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKL 678
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+I FL+K LD P + AI L+D+ AL E +T LG L L V P + K++
Sbjct: 679 G-SIGRFLEKALDRPTEEAVNLAIKNLRDLNALDHTENLTPLGFHLARLPVEPHIGKLIL 737
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L+ CLDP LT+A + ++DPF +P+ ++K A + L+ +SD L ++ AF
Sbjct: 738 FGALLGCLDPVLTIAASLSFKDPFFIPLG--KEKMADMRRRTLSR--NSKSDHLTIVYAF 793
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
+ W++AK+RG E +C F+S+ + M+ M+ Q L GF+ P+D S +
Sbjct: 794 QGWEDAKRRGGRYEREYCWDNFLSANTLQMIHNMKSQFAEHLKHTGFVSSKDPKDPES-N 852
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ +I AV++AGLYP VA +RP H R V+ T KV +HP S+N + +K
Sbjct: 853 INSDNEKLIKAVIVAGLYPKVATIRPSHSKKRPGVKVYTQADGKVNIHPKSVNAE---EK 909
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+ ++Y + + + +CT V P LL +I + D E
Sbjct: 910 EFNYTWLIY-HLKMKTSSIFLYDCTEVSPFSLLFFGGDITIQKDEDQE 956
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 161/229 (70%), Gaps = 19/229 (8%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETC 236
+++++ R KLP S K+ + ++SN+V+++SGETGCGKTTQV QF+L+ ++G C
Sbjct: 227 KEMLKFREKLPSYSKKEDLVELINSNRVLVVSGETGCGKTTQVTQFILDDYINRGVGSLC 286
Query: 237 KIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLR 293
++VCTQPRRISA SVAER++ ERGE++G+ + GY+IRL+S+ + SI++CT G++L+
Sbjct: 287 RVVCTQPRRISAISVAERVAAERGESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQ 346
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
L S +S+++H+++DEIHER+ SD +L I++D+L L++I
Sbjct: 347 WLRSDPT--------------LSSISHLVLDEIHERNLQSDVLLIIVKDLLRMRDDLKVI 392
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
LMSATL+A++FS+YF CP+I +PG T+PV+ F LEDV+ +++ N
Sbjct: 393 LMSATLNAEKFSKYFDNCPMIHIPGLTFPVEEFLLEDVVEMIRYRPQNQ 441
>gi|410909916|ref|XP_003968436.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Takifugu
rubripes]
Length = 1046
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 203/470 (43%), Positives = 289/470 (61%), Gaps = 19/470 (4%)
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
E IDL LI L+R + ++ +GAILVFLPGW+ I+ D L+A FR + +FVIIPLHS
Sbjct: 498 EKIDLQLIVSLIRHVVLNEGEGAILVFLPGWDGISSLNDLLMAQQMFR-SDRFVIIPLHS 556
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
++P+V Q +VFKRPPPG RKI+++TNIAET+ITIDDVV+VID G++KE +D NN+ST+
Sbjct: 557 LMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTNNNISTM 616
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
WVS A+AKQR GRAGR G CYHLY+ LRA+ + +Q+PEI R P+EELCLQ+K+L
Sbjct: 617 TEEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRASLMDAYQLPEILRTPLEELCLQIKIL 676
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
+I FL+K LDPP + AI L D+ AL E +T LG L L V P + K+
Sbjct: 677 KLG-SIARFLEKALDPPTEKAVSLAIKNLTDLNALDHTENLTALGFHLARLPVEPHIGKL 735
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ F L+ CLDP LT+A + ++DPF +P+ ++K A + L+ +SD L +I
Sbjct: 736 ILFGALLGCLDPVLTIAASLSFKDPFFIPL--GKEKMADMRRKVLSR--NSKSDHLTIIN 791
Query: 841 AFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSS 894
AF+ W+ AKQRG E +C F+SS + ML M+ Q L+ GF+ P+D S
Sbjct: 792 AFQGWEQAKQRGARYEREYCWDNFLSSNTLQMLQNMKGQFAEHLMHAGFVSSPDPKDPKS 851
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSF 952
+ N+ +I AV++AGLYP VA +RP + R V+ T +V +HP S+N +
Sbjct: 852 -NVNSDNEKLIKAVIVAGLYPKVATIRPSYSKKRPGVKVYTQADGRVYIHPKSVNAE--- 907
Query: 953 KKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
++ + ++Y R + + +CT V P LL +I + +E
Sbjct: 908 EREFNYKWLIYHLKMR-TSSIFLYDCTEVSPFSLLFFGGDITIQKEEGDE 956
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 169/242 (69%), Gaps = 26/242 (10%)
Query: 167 SLTSRIEKD-------ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTT 219
SL R+++D +++++ R KLP K+ + + ++SN+VV++SGETGCGKTT
Sbjct: 208 SLDDRLKRDLLEKKSEPKYKEMLQFREKLPSYGKKEDLMALINSNRVVVVSGETGCGKTT 267
Query: 220 QVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLES 275
QV QF+L+ S+G C++VCTQPRRISA SVAER++ ER E++G+ + GY+IRL+S
Sbjct: 268 QVTQFILDDHISRGLGSICRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQS 327
Query: 276 K-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+ + SI++CT G++L+ L S + +S+++H+++DEIHER+ SD
Sbjct: 328 RLPRRQGSILYCTTGIILQWLHSDPL--------------LSSISHLVLDEIHERNLQSD 373
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L I++D+L L++ILMSATL+A++FS+YFGGCP+I +PGFT+PV+ F LEDV+ +
Sbjct: 374 VLLIIVKDLLSLRDDLKIILMSATLNAEKFSKYFGGCPMIHIPGFTFPVEEFLLEDVVQM 433
Query: 395 LK 396
+
Sbjct: 434 TR 435
>gi|47224961|emb|CAF97376.1| unnamed protein product [Tetraodon nigroviridis]
Length = 706
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 206/478 (43%), Positives = 293/478 (61%), Gaps = 25/478 (5%)
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
E IDL LI L+R+I ++ +GAILVFLPGW+ I+ D L+A FR + +FVIIPLHS
Sbjct: 180 EKIDLELIASLIRQIVLNEGEGAILVFLPGWDGISSLNDLLMAQQMFR-SDRFVIIPLHS 238
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
++P+V Q +VFK+PPPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+
Sbjct: 239 LMPTVNQTQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTNNNISTM 298
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
WVS A+AKQR GRAGR G CYHLY+ LRA+ + +Q+PEI R P+EELCLQ+K++
Sbjct: 299 TEEWVSLANAKQRRGRAGRVCPGKCYHLYNGLRASLMDAYQLPEILRTPLEELCLQIKVI 358
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
+I FL+K LDPP + AI L D+ AL E +T LG L L V P + K+
Sbjct: 359 LKLGSIARFLEKALDPPTEKAVSLAIKNLMDLNALDHAENLTALGFHLARLPVEPHIGKL 418
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ F ++ CLDP LT+A + ++DPF +P+ ++K A + L+ +SD L +I
Sbjct: 419 ILFGAMLGCLDPVLTIAASLSFKDPFFIPLG--KEKMADMRRKVLSR--NSKSDHLTIIN 474
Query: 841 AFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSS 894
AF+ W+ AKQRG E +C F+S+ + ML M+ Q L+ GF+ P+D S
Sbjct: 475 AFQGWEQAKQRGARYEREYCWDNFLSANTLQMLQNMKGQFAEHLMHAGFVSSPDPKDPKS 534
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGRRFVETAGGAKVRLHPHSLNFKLSF 952
+ N+ +I AV++AGLYP VA++R KN R V T KV +HP S+N +
Sbjct: 535 -NVNSDNEKLIKAVIVAGLYPKVAKIRQSFSKKNPRVKVYTQSDGKVSIHPKSVNAE--- 590
Query: 953 KKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDM 1010
++ + ++Y R + + +CT V P LL +I + DE D+M
Sbjct: 591 EQEFNYKWLIYHLKMRT-SSIFLYDCTEVSPFSLLFFGGDITI-------QKDEGDEM 640
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 67/82 (81%)
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
+S+++H+++DEIHER+ SD +L I++D+L L++ILMSATL+AD+FS+YF CP+I
Sbjct: 2 LSSISHLVLDEIHERNLQSDVLLIIVKDLLSLRDDLKIILMSATLNADKFSKYFDRCPMI 61
Query: 375 QVPGFTYPVKSFYLEDVLSILK 396
+PGFT+PV+ F LEDV+ +++
Sbjct: 62 HIPGFTFPVEEFLLEDVVQMIR 83
>gi|221044708|dbj|BAH14031.1| unnamed protein product [Homo sapiens]
Length = 873
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/413 (47%), Positives = 272/413 (65%), Gaps = 15/413 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 384 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 442
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 443 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 502
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 503 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 562
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 563 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 621
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 622 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 677
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 678 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 736
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLN 947
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N
Sbjct: 737 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN 789
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 150/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 118 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 177
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 178 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 237
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S++ HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 238 Y--------------LSSVGHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 283
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 284 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 320
>gi|119569363|gb|EAW48978.1| YTH domain containing 2, isoform CRA_a [Homo sapiens]
Length = 898
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 214/588 (36%), Positives = 329/588 (55%), Gaps = 60/588 (10%)
Query: 546 VLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
+ +E +LR +++ GA+L+FLPG+++I RDR+L D ++ + LHS
Sbjct: 78 MFLEDILRTTGYTNKEMLKYGAVLIFLPGYDEIVGLRDRILF-----DDKRYQVFMLHSN 132
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+ + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+
Sbjct: 133 MQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLK 192
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL
Sbjct: 193 MVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLA 252
Query: 722 P-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM
Sbjct: 253 PVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKM 312
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ A+++ CLDP LT+AC YRDPF LP ++K+ A + + G SD +A++
Sbjct: 313 VLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLR 370
Query: 841 AFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCS 896
AF+ W+ A+ G E FC + F+S M +++GMR QL +L +GF+ D+ +
Sbjct: 371 AFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVN 430
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK- 954
N+ ++ A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 431 TNSENWAVVKAALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKI 485
Query: 955 --------------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPD 1000
TD ++YDE+TR ++R C+ V P+ +L+ +A
Sbjct: 486 PPANGQAAAIKALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNAL 542
Query: 1001 NEDDD-EDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGS 1059
E D + +D +D E++DKT+ + +D WL+F
Sbjct: 543 QEPSSFRVDGIPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLHFTL 583
Query: 1060 TALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
+ + LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 584 EPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 631
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 64/96 (66%)
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
+S +TH+IVDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI
Sbjct: 7 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 66
Query: 375 QVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
+ G + VK +LED+L L ++++
Sbjct: 67 YIQGRPFEVKEMFLEDILRTTGYTNKEMLKYGAVLI 102
>gi|387018196|gb|AFJ51216.1| putative ATP-dependent RNA helicase DHX36 [Crotalus adamanteus]
Length = 993
Score = 365 bits (938), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 200/471 (42%), Positives = 293/471 (62%), Gaps = 24/471 (5%)
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
L+R I ++ E+GAILVFLPGW++I+ D L++ F+ + +FVIIPLHS++P+V Q +V
Sbjct: 463 LIRYIALEEEEGAILVFLPGWDNISTLHDLLVSQVMFK-SDRFVIIPLHSLMPTVNQTQV 521
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
FK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ + WVSKA+A
Sbjct: 522 FKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMAAEWVSKANA 581
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFL 730
KQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L I +FL
Sbjct: 582 KQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLG-GIANFL 640
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
+DPP + +I L+++ AL E++T LG L L V P + KM+ F L CL
Sbjct: 641 MNLMDPPSHDAVLLSIKHLKELNALDRQEQLTPLGVHLARLPVEPHIGKMILFGALFCCL 700
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+A ++DPF +P+ ++K A A + EL+ +SD L V+ AF+ W+ A++
Sbjct: 701 DPVLTIAAGLSFKDPFIIPLG--KEKLADARRKELSR--NSKSDHLTVVNAFKGWEEAQR 756
Query: 851 RG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGI 904
RG E +C +YF+SS + ML M+ Q L+ GF+ P D S + N+ +
Sbjct: 757 RGFRYEKDYCWEYFLSSNTLQMLRNMKGQFAEHLLAAGFVNSRNPRDPKS-NINSENEKL 815
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMV 962
+ AV+ AGLYP VA++R R+ V+ T V +HP S+N + + + +V
Sbjct: 816 LKAVICAGLYPKVAKIRANFSKKRKMVKVSTKTDGTVNIHPKSVNVEEAEFHYN---WLV 872
Query: 963 YDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDD 1013
Y R +++ +CT V P LL +I++ +D D+D D+
Sbjct: 873 YHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISI-----QKDKDQDTIAVDE 917
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/222 (47%), Positives = 154/222 (69%), Gaps = 19/222 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP S + + + +++++V +ISGETGCGKTTQV QF+L+ KG +C+IVCTQ
Sbjct: 189 REKLPSYSMRKELVNLINNSRVTVISGETGCGKTTQVTQFILDDYIERGKGSSCRIVCTQ 248
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++VER E+ G+ +IGY+IRLES+ + SI++CT G++L+ L S
Sbjct: 249 PRRISAISVAERVAVERAESCGNRKSIGYQIRLESRLPRRQGSILYCTTGIVLQWLQSD- 307
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++H+I+DE+HER+ SD ++AII+D+L L++ILMSATL
Sbjct: 308 -------------KQLSSISHVILDEVHERNLQSDVLMAIIKDLLNVRLDLKVILMSATL 354
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESN 401
+A++FS YF GCP+I +PG YPVK + LEDV+ L+ N
Sbjct: 355 NAEKFSDYFDGCPMIHIPGLAYPVKEYLLEDVIEKLRYMPEN 396
>gi|190570328|ref|NP_001122016.1| probable ATP-dependent RNA helicase DHX36 [Danio rerio]
Length = 1037
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/485 (41%), Positives = 295/485 (60%), Gaps = 38/485 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS-KFVIIPLHSM 601
IDL L L+R I ++ +GAILVFLPGW++I+ D L+++ F+ +F+IIPLHS+
Sbjct: 484 IDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSL 543
Query: 602 VPSVQQKKV-------FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
+P+V Q +V FK+PPPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 544 MPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 603
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ T+ + WVS A+AKQR GRAGR G CYHLY+ LRA+ L ++Q+PEI+R P+EELC
Sbjct: 604 NNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELC 663
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FLQKT+DPP I AI L D+ AL DEK+T LG L + V
Sbjct: 664 LQIKVLKLG-PIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLARMPVE 722
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L+ CLDP LT+A + ++DPF +P+ K++ + ++ S +SD
Sbjct: 723 PHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLG---KEKIADQRRKMFS-QNSRSD 778
Query: 835 QLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L+++ AF W++AK++G E +C F+S+ + ML M+ Q L++ GF+
Sbjct: 779 HLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKD 838
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF---VETAGGAKVRLHPHS 945
P+D SS + N+ ++ AV++AGLYP VA++ P H R V T KV +HP S
Sbjct: 839 PKDPSS-NINSENKKLVKAVIVAGLYPKVAKISPSHNKKRPMPVKVYTKADGKVCIHPKS 897
Query: 946 LN---FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+N + +K +VY + + + +CT V P LL I++
Sbjct: 898 VNAEETQFQYK------WLVY-HLKMKTTSIFLYDCTEVSPFSLLFFGGNISI-----QR 945
Query: 1003 DDDED 1007
D D+D
Sbjct: 946 DQDQD 950
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 158/228 (69%), Gaps = 19/228 (8%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK 232
E +A ++++ R KLP ++ + + +N+V++ISGETGCGKTTQV QF+L+ +
Sbjct: 205 EDNAAYIEMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQR 264
Query: 233 GE--TCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCT 287
G+ C++VCTQPRRISA SVAER++VER E +G+ + GY+IRL+S+ K S+++CT
Sbjct: 265 GQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCT 324
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GV+L+ L S +S++TH+++DEIHER SD ++ I++D+L +
Sbjct: 325 TGVILQWLHSDPY--------------LSSITHLVLDEIHERSVQSDILITIVKDLLTAR 370
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
L+++LMSATL+A++FS+YF CP+I +PG+T+PV + LEDV+ +L
Sbjct: 371 DDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPVTEYLLEDVVELL 418
>gi|395528308|ref|XP_003766272.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36 [Sarcophilus harrisii]
Length = 962
Score = 362 bits (929), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 201/467 (43%), Positives = 292/467 (62%), Gaps = 26/467 (5%)
Query: 555 ICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
+C+ +DGAILVFLPGW++I+ D L++ F+ + +F+IIPLHS++P+V Q +VFKR
Sbjct: 438 LCL--QDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFIIIPLHSLMPTVNQTQVFKRT 494
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D NN+ST+ + WVSKA+AKQR
Sbjct: 495 PPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRK 554
Query: 675 GRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTL 734
GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L I FL + +
Sbjct: 555 GRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLG-GIAYFLSRLM 613
Query: 735 DPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL 794
DPP + +I L ++ AL E++T LG L L V P + KM+ F L CLDP L
Sbjct: 614 DPPSHDAVLLSINHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 673
Query: 795 TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG-- 852
T+A + ++DPF +P+ ++K A A + EL+ +SD L V+ AFE W+ A++RG
Sbjct: 674 TIAASLSFKDPFVIPLG--KEKVADARRKELSK--NTKSDHLTVVNAFEGWEEARRRGFR 729
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAV 908
E +C +YF+SS + ML M+ Q L+ GF+ P+D S + N+ II AV
Sbjct: 730 FEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVSSKNPKDPKS-NINSDNEKIIKAV 788
Query: 909 LMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEI 966
+ AGLYP VA++RP R+ V+ T V +HP S+N + S + ++Y
Sbjct: 789 ICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEESEFHYN---WLIYHLK 845
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDD 1013
R +++ +CT V P LL +I++ +D D+D D+
Sbjct: 846 MRT-SSIYLYDCTEVSPYCLLFFGGDISI-----QKDKDQDTIAVDE 886
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 171/280 (61%), Gaps = 41/280 (14%)
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE-----------------RS 186
RGK++ + K+ + E L E D +L Q+++E R
Sbjct: 102 RGKKLT-----ERGKSFVDRDSEYLLQENEPDVDLDQLLKEDLKRKKSDPRYIEMQHFRE 156
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQPR 244
KLP + + + +++NQV +ISGETGCGKTTQV QF+L+ KG C+IVCTQPR
Sbjct: 157 KLPSYGMQKELVNLINNNQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPR 216
Query: 245 RISATSVAERISVERGE--NIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGVS 301
RISA SVAER++ ER E G + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 217 RISAISVAERVATERAEPCGSGHSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP-- 274
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
+S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSATL+A
Sbjct: 275 ------------QLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNA 322
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESN 401
++FS+YFGGCP+I +PGFT+PV + LEDV+ ++ N
Sbjct: 323 EKFSEYFGGCPMIHIPGFTFPVAEYLLEDVIEKIRYTPEN 362
>gi|149029549|gb|EDL84747.1| similar to YTH domain containing 2 (predicted) [Rattus norvegicus]
Length = 818
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 212/581 (36%), Positives = 323/581 (55%), Gaps = 54/581 (9%)
Query: 550 QLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQ 607
LL IC + ++FLPG+++I RDR+L + F +T ++ + LHS + + Q
Sbjct: 2 HLLYNICHSCD---AVIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQ 58
Query: 608 KKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSK 667
KKV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SK
Sbjct: 59 KKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 118
Query: 668 ASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNI 726
ASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I
Sbjct: 119 ASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTI 178
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
DFL K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A++
Sbjct: 179 ADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVV 238
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
+ CLDP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+
Sbjct: 239 LKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQ 296
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVP 902
A+ G E FC + F+S M +++GMR QL +L +GF+ D+ + N+
Sbjct: 297 KARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENW 356
Query: 903 GIIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK------- 954
++ A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 357 AVVKAALVAGMYPNLV-----HVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQ 411
Query: 955 --------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
TD ++YDE+TR ++R C+ V P+ +L+ P +
Sbjct: 412 AAAIQALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFC-------GPARLTSNA 461
Query: 1007 DDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQ 1066
+ S AD +D E++D+T+ + +D WL F +
Sbjct: 462 LQEPSSFRADGIPNDSSDSEMEDRTTANLA-----------ALKLDEWLNFKLEPEAASL 510
Query: 1067 IYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
+ LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 511 LLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 551
>gi|349602932|gb|AEP98918.1| putative ATP-dependent RNA helicase DHX36-like protein, partial
[Equus caballus]
Length = 787
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/385 (48%), Positives = 258/385 (67%), Gaps = 13/385 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I + EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 402 VDLNLIAALIRYIVLKEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 460
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D NN+ST+ +
Sbjct: 461 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSA 520
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 521 EWVSKANAKQRRGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 580
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 581 G-GIACFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 639
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 640 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTKSDHLTVVNAF 695
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 696 EGWEEARRRGFRHEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRDPKDPES-N 754
Query: 897 HNARVPGIIHAVLMAGLYPMVARLR 921
N+ II AV+ AGLYP VA+LR
Sbjct: 755 VNSDNEKIIKAVICAGLYPKVAKLR 779
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 177/279 (63%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE-IAMKVESLTSRIEKDANLRQIVEE- 184
E EK NQ +++ + R + +D + + E A + L ++K R+ +E
Sbjct: 74 EDQEKKLINQEKQTFRIRDRYIDRDSEYLFQENEPDATLDQQLLEDLQKKKTDRRYIEMQ 133
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 134 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNCIERGKGSACRIVC 193
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 194 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 253
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +++ +L P L++ILMSA
Sbjct: 254 D--------------PHLSSVSHIVLDEIHERNLQSDVLMTVVKGLLNFRPDLKVILMSA 299
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 300 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 338
>gi|302812873|ref|XP_002988123.1| hypothetical protein SELMODRAFT_426836 [Selaginella moellendorffii]
gi|300144229|gb|EFJ10915.1| hypothetical protein SELMODRAFT_426836 [Selaginella moellendorffii]
Length = 935
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 202/498 (40%), Positives = 293/498 (58%), Gaps = 41/498 (8%)
Query: 519 ENALSDSMKQ--QLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINK 576
E A+ D+ KQ + KYL NPE+IDL L+E ++ IC + DGAILVFL GW+DI+K
Sbjct: 379 EVAIQDTYKQFSKSTRKYLECWNPEIIDLDLVEAAIQHICEEKNDGAILVFLTGWDDISK 438
Query: 577 TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
D+L NP R+ +++PLH +P++ Q+++F+RPPPG RKI+L+TNIAET+ITIDD
Sbjct: 439 LLDKLKLNPSVRNE---LLLPLHGSMPTINQRQIFQRPPPGVRKIVLATNIAETSITIDD 495
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
VVYVID G+ KE SYD N ++ L SW+S+A+A QR GRAGR Q GIC+HLY +L +
Sbjct: 496 VVYVIDCGKAKETSYDALNKLACLLPSWISRAAAHQRRGRAGRVQPGICFHLYPKLMYDA 555
Query: 697 LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS 756
+ +Q+PEI R P+E LCLQ+K L +I FL K L+PP + NAI L+ IGAL
Sbjct: 556 MAQYQLPEILRTPLESLCLQIKSLQVG-SIAKFLSKALEPPELRAVDNAIESLKTIGALD 614
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
E++T LG L L + P + KML + CLDPALT+A A +RDPF +PI +++
Sbjct: 615 DREELTSLGRHLATLPLDPKVGKMLLMGAIFQCLDPALTIAAALAHRDPFVIPI--DKRD 672
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
A AK LA +SD LA++ A+E + AK+ G+E +C + F+S+ + + G R+
Sbjct: 673 AADEAKRRLAG--NARSDHLALMRAYEGYIVAKRHGRERNYCWENFLSAQTLQWMDGARE 730
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVP-----------------------GIIHAVLMAGL 913
Q L K GF+ +S ++ + ++ AVL AGL
Sbjct: 731 QFYDHLSKIGFVDNSSNSANYAVEITLQCLSPTYDAFLVQAYNKHSDDLEMVRAVLCAGL 790
Query: 914 YPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLS-FKKTDDCPLMVYDEITRGDGG 972
YP V + + + F + G KV HP S+N ++ F + P +VY E + G
Sbjct: 791 YPNVVQCKARGRRTAFFTKDDG--KVEPHPASVNSRVGQFAQ----PWLVYSEKVK-TTG 843
Query: 973 MHVRNCTVVGPLPLLLLA 990
+++R+ T + LL+
Sbjct: 844 IYLRDTTNISDYALLMFG 861
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 148/210 (70%), Gaps = 16/210 (7%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP KD + V NQV+++SGETGCGKTTQ+PQF+LE + +G C I+CTQ
Sbjct: 149 RKKLPAFKMKDEVLQAVSQNQVLVVSGETGCGKTTQLPQFILEEEINAGRGAACDIICTQ 208
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRISA SVA R++ ERG+ +G+++GY+IRLE++ + + ++FCT GVLLR LV +
Sbjct: 209 PRRISAISVATRVADERGDELGESVGYQIRLEARRSQETRLLFCTTGVLLRRLVQDPL-- 266
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
+ ++H+IVDEIHER DF+L ++RD+LP P LRLILMSAT++AD
Sbjct: 267 ------------LEGVSHVIVDEIHERGMNEDFLLVVLRDLLPKRPKLRLILMSATINAD 314
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
FS+YFG P + +PGFT+PV+ F+LEDV+
Sbjct: 315 MFSKYFGNAPKLHIPGFTFPVREFFLEDVV 344
>gi|426218093|ref|XP_004003284.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2 [Ovis
aries]
Length = 996
Score = 355 bits (911), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 201/476 (42%), Positives = 286/476 (60%), Gaps = 33/476 (6%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+ ++ E +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 464 IEVMDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK------ 517
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 518 ---------SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 568
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 569 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELC 628
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 629 LQIKILRLG-GIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVE 687
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 688 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELAK--DTKSD 743
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AF+ W+ AKQRG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 744 HLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRN 803
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 804 PQDPES-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSV 862
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + + + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 863 NVE---QTEFNYNWLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 914
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 178/279 (63%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ ++ + R K +D + + + E + + L +K +LR I +
Sbjct: 144 EHQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDAILDQQLLEDLQKKKTDLRYIEMQ 203
Query: 185 R--SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 204 RFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 263
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 323
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +++D+L P L+++LMSA
Sbjct: 324 D--------------PHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSA 369
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 370 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 408
>gi|301607413|ref|XP_002933293.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform 2
[Xenopus (Silurana) tropicalis]
Length = 967
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 219/565 (38%), Positives = 306/565 (54%), Gaps = 88/565 (15%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L + E +DL LI +L+R I + EDGAILVFLPGW++I+ D L++ F+
Sbjct: 435 LELADDEKVDLDLIAELIRYIVLKGEDGAILVFLPGWDNISTLNDLLMSQVMFK------ 488
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
SV Q +VFKRPPPG RKI+++TNIAET+ITIDDVV+VID G++KE +D
Sbjct: 489 ---------SVNQTEVFKRPPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQ 539
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVS A+AKQR GRAGR Q G CYHLY+ LR + L D+Q+PEI R P+EELC
Sbjct: 540 NNISTMTAEWVSHANAKQRKGRAGRVQPGHCYHLYNSLRDSLLDDYQLPEIVRTPLEELC 599
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL+K +D P TI AI L ++ AL E++T LG L L V
Sbjct: 600 LQIKILKLG-GIASFLRKLMDTPSRDTICLAINHLMELNALDKREELTPLGFHLARLPVE 658
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + EL+ +SD
Sbjct: 659 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKLADARRKELSR--NSKSD 714
Query: 835 QLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W++AK RG A +C + F+SS + ML M+ Q L+ GF+
Sbjct: 715 HLTVLNAFEGWEDAKWRGGRAERDYCWENFLSSNSLKMLSNMKGQFAEHLLSAGFVSSRS 774
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P D S + N+ +I AV+ AGLYP VA++RP R+ V+ T KV +HP S+
Sbjct: 775 PNDPKS-NINSTNEKLIKAVICAGLYPKVAKIRPNFGKRRKMVKVYTKSDGKVNIHPKSV 833
Query: 947 N-----FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDN 1001
N F S+ +VY R +++ +CT V P LL +I++
Sbjct: 834 NVEETEFHYSW--------LVYHLKMR-TTSIYLYDCTEVSPYSLLFFGGDISI-----Q 879
Query: 1002 EDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTA 1061
+D D+D T+ VD W+ F S A
Sbjct: 880 KDKDQD----------------------------------------TIAVDEWIVFQSPA 899
Query: 1062 LDIAQIYCLRERLSVAILFKVTHPQ 1086
+ L+ L V + K+ PQ
Sbjct: 900 RIAHLVKDLKSELDVLLKEKIEKPQ 924
Score = 220 bits (560), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 155/217 (71%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HI-WSKGETCKIVCTQ 242
R KLP S K++I ++SNQV +ISGETGCGKTTQV QF+L+ HI KG +C IVCTQ
Sbjct: 177 REKLPSYSMKEMIIKMINSNQVTVISGETGCGKTTQVTQFILDDHIKRGKGSSCYIVCTQ 236
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E G ++ GY+IRLES+ K SI++CT G++++ L S
Sbjct: 237 PRRISAISVAERVAAERAEACGRGNSTGYQIRLESQMPRKQGSILYCTTGIVIQWLQSD- 295
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P +VS H+++DEIHER+ SD ++AI++D+L L++ILMSATL
Sbjct: 296 ----------PHLANVS---HVVIDEIHERNLQSDVLMAIVKDLLTFRSDLKVILMSATL 342
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FSQYFG CP++ +PGFTYPVK + LEDV+ +L+
Sbjct: 343 NAEKFSQYFGYCPMLHIPGFTYPVKEYLLEDVIEMLR 379
>gi|410971148|ref|XP_003992035.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3 [Felis
catus]
Length = 998
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 286/476 (60%), Gaps = 33/476 (6%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 466 LEMIDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK------ 519
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 520 ---------SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 570
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 571 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 630
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 631 LQIKILRLG-GIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVE 689
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 690 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTKSD 745
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W++A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 746 HLTVVNAFEGWEDARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRN 805
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 806 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSV 864
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + + + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 865 NVEQTEFHYN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 916
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 182/279 (65%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ +++ + R K +D + + + E + + + L +K ++ R I +
Sbjct: 146 EDQEKKLINQEKRTFRIRDKYIDRDSEYLLQENEPDVTLDQQLLEDLQKKKSDPRYIEMQ 205
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 206 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 265
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L
Sbjct: 266 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL-- 323
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
Q SRL S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 324 QSDSRL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSA 371
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 372 TLNAEKFSEYFGNCPMIHIPGFTFPVAEYLLEDIIEKIR 410
>gi|301778667|ref|XP_002924751.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform 2
[Ailuropoda melanoleuca]
Length = 995
Score = 352 bits (902), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 285/476 (59%), Gaps = 33/476 (6%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ E +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 463 LEMMDDEKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK------ 516
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 517 ---------SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 567
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVS+A+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 568 NNISTMSAEWVSQANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 627
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 628 LQIKILRLG-GIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVE 686
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 687 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTKSD 742
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 743 HLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRN 802
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 803 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSV 861
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + + + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 862 NVEQTEFHYN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 913
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 181/279 (64%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK +Q +++ + R K +D + + + E + + + L +K ++LR I +
Sbjct: 143 ENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVTLDQQLLEDLQKKKSDLRYIEMQ 202
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 203 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 262
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 263 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 322
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 323 DS--------------HLSSVSHIVLDEIHERNLQSDVLMTVIKDLLSFRPDLKVILMSA 368
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 369 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 407
>gi|291400036|ref|XP_002716351.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
[Oryctolagus cuniculus]
Length = 990
Score = 352 bits (902), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 213/560 (38%), Positives = 305/560 (54%), Gaps = 78/560 (13%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 458 LEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK------ 511
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
SV Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 512 ---------SVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 562
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 563 NNISTMTAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 622
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 623 LQIKILRLG-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVE 681
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 682 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 737
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 738 HLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVNSRS 797
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V LHP S+
Sbjct: 798 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRVNLGKKRKMVKVYTKTDGLVALHPKSV 856
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
N ++TD + + +++ +CT V P LL +I++ D E
Sbjct: 857 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE---- 908
Query: 1007 DDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQ 1066
T+ VD W+ F S A
Sbjct: 909 -----------------------------------------TIAVDEWIVFQSPARIAHL 927
Query: 1067 IYCLRERLSVAILFKVTHPQ 1086
+ LR+ L + + K+ PQ
Sbjct: 928 VKELRKELDILLQEKIESPQ 947
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 158/231 (68%), Gaps = 21/231 (9%)
Query: 173 EKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+K +LR I + R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++
Sbjct: 186 KKKTDLRYIEMQQFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI 245
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVF 285
KG C+IVCTQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++
Sbjct: 246 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILY 305
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++L+ L S +S+++HI++DEIHER+ SD ++ +I+D+L
Sbjct: 306 CTTGIILQWLQSDP--------------HLSSVSHIVLDEIHERNLQSDVLMTVIKDLLN 351
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 352 FRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVAEYLLEDIIEKIR 402
>gi|456753275|gb|JAA74136.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36 tv2 [Sus scrofa]
Length = 998
Score = 352 bits (902), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 199/468 (42%), Positives = 282/468 (60%), Gaps = 33/468 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 474 VDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-------------- 519
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 520 -SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 578
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 579 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 638
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 639 G-GIAYFLSRLMDPPSNEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 697
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 698 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELAK--DTKSDHLTVVNAF 753
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 754 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVRSRNPKDPES-N 812
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N + +
Sbjct: 813 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFH 872
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+ ++Y R +++ +CT V P LL +I++ D E
Sbjct: 873 YN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDSDQE 916
Score = 214 bits (544), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 178/279 (63%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ ++ + R K +D + + + E + + + L +K +LR I +
Sbjct: 146 ENQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDVTLDQQLLEDLQKKKTDLRYIEMQ 205
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 206 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 265
Query: 241 TQPRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 266 TQPRRISAISVAERVAAERAETCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 325
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +I+D+L P L+++LMSA
Sbjct: 326 DP--------------HLSSVSHILLDEIHERNLQSDVLMTVIKDLLSYRPDLKVVLMSA 371
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 372 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 410
>gi|156374273|ref|XP_001629732.1| predicted protein [Nematostella vectensis]
gi|156216739|gb|EDO37669.1| predicted protein [Nematostella vectensis]
Length = 802
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/464 (40%), Positives = 284/464 (61%), Gaps = 30/464 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
ID L +L++ IC++ E GAILVF+PGWEDI+K + L + K ++IPLHS++
Sbjct: 260 IDFDLAVKLIQHICLNMEAGAILVFMPGWEDISKLHENLKRT---LPSDKCLLIPLHSLM 316
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+ Q++VF RPP G RKI+++TNIAET+ITIDDVV+V+D G++KEKSYD +S L
Sbjct: 317 PTANQRQVFDRPPLGVRKIVIATNIAETSITIDDVVFVVDCGKVKEKSYDASRKISCLMP 376
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W+S AS++QR GRAGR Q G C+HL++QL+A S D+Q+PE+ R P+EELCLQ+K+L
Sbjct: 377 VWISTASSRQRRGRAGRVQPGYCFHLFTQLQAQSFIDYQLPEMLRTPLEELCLQIKILKL 436
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ +FL K L PP + ++NA+ VL + AL E +T LG L L V P + KM+
Sbjct: 437 GM-VREFLSKALQPPEPLAVQNALDVLAQLNALDTKENLTPLGYHLASLPVDPRIGKMIL 495
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F ++ CLDP LT+A +R+PF P+ ++KK A + LA SD +AV+ A+
Sbjct: 496 FGAILSCLDPVLTVASTLGFREPFVYPL--DKKKLADKVRTRLAG--DSHSDHIAVLNAY 551
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHN 898
W+ A + G + +C + F+S+ + ML M+ Q L +GF+ P++ S +HN
Sbjct: 552 RGWEAASRHGNASTYCWENFLSTQTLKMLSNMKCQFARLLYDSGFLKSSDPKE-PSANHN 610
Query: 899 ARVPGIIHAVLMAGLYPMVARL-------RPPHKNGRRFVETAGGAKVRLHPHSLNFKLS 951
A ++ A+L AGLYP VAR+ RPP R F + G KV LHP S+N +++
Sbjct: 611 ADNIKLVKAILCAGLYPNVARIEHHDKLKRPP----RLFTQEDG--KVALHPKSVNVEVT 664
Query: 952 FKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+ D ++Y + + + + + TV+ P PLL I++
Sbjct: 665 AFQND---WLIYHQKIKS-SKVFIHDSTVIAPFPLLFFGGSISM 704
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 145/208 (69%), Gaps = 18/208 (8%)
Query: 193 FKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCTQPRRISATS 250
K I + +NQVV+ISGETGCGKTTQV QF+L+ G C+I CTQPRRISA S
Sbjct: 1 MKKEILGLISTNQVVVISGETGCGKTTQVAQFILDDAIQCGNGSLCRIACTQPRRISAIS 60
Query: 251 VAERISVERGENIGD-NIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
VAER+++ERGE G ++GY+IRLES+ + SI++CT GVL R LVS
Sbjct: 61 VAERVAIERGEQCGGGSVGYQIRLESRLPRSRGSIIYCTTGVLQRWLVSDPF-------- 112
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF 368
+ + +H+I+DEIHERD SDF+L IIRD+LP P L+L+LMSATL+A+ FS YF
Sbjct: 113 ------LKSTSHVIIDEIHERDLMSDFLLIIIRDLLPRRPDLKLVLMSATLNAEIFSTYF 166
Query: 369 GGCPVIQVPGFTYPVKSFYLEDVLSILK 396
G CP++ +PGFTYPVK FY+E+++ + +
Sbjct: 167 GKCPMLHIPGFTYPVKEFYIEEIIEMTR 194
>gi|334347447|ref|XP_003341929.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Monodelphis domestica]
Length = 996
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/476 (41%), Positives = 284/476 (59%), Gaps = 32/476 (6%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL L+ L+R I ++ EDGAILVFLPGW++I+ D L++ F+ S
Sbjct: 463 LEMMDDDKVDLNLVAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSVS--- 519
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
Q VFKR PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D
Sbjct: 520 -----------NQTSVFKRTPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQ 568
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 569 NNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 628
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 629 LQIKILRLG-GIAYFLSRLMDPPSHDAVLLSINHLMELNALDKQEELTPLGVHLARLPVE 687
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + EL+ +SD
Sbjct: 688 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELSK--NTKSD 743
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 744 HLTVVNAFEGWEEARRRGFRFEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVSSKN 803
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++RP R+ V+ T V +HP S+
Sbjct: 804 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSV 862
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + S + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 863 NVEESEFHYN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDKDQE 914
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 171/280 (61%), Gaps = 41/280 (14%)
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE-----------------RS 186
RGK++ M K+ + E L E D +L Q ++E R
Sbjct: 152 RGKKL-----ADMGKSFVDRDSEYLLQENEPDVDLDQQLKEDLKRKKSDPRYIEMQHFRE 206
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQPR 244
KLP + + + +++NQV +ISGETGCGKTTQV QF+L+ KG +C+IVCTQPR
Sbjct: 207 KLPSYGMQKELVNLINNNQVTVISGETGCGKTTQVTQFILDDYIERGKGSSCRIVCTQPR 266
Query: 245 RISATSVAERISVERGE--NIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGVS 301
RISA SVAER++ ER E G + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 267 RISAISVAERVAAERAEPCGSGHSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD--- 323
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
+S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSATL+A
Sbjct: 324 -----------QQLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNA 372
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESN 401
++FS+YFGGCP+I +PGFT+PV + LEDV+ ++ N
Sbjct: 373 EKFSEYFGGCPMIHIPGFTFPVAEYLLEDVIEKIRYMPEN 412
>gi|344288910|ref|XP_003416189.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Loxodonta africana]
Length = 1000
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 310/560 (55%), Gaps = 75/560 (13%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ +
Sbjct: 465 LEMMDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISSLHDLLMSQVMFKSVLMCL 524
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
+ +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 525 FL------------QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 572
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 573 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 632
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL++ +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 633 LQIKILRLG-GIAYFLRRLMDPPSNEAVLLSIKHLIELNALDKQEELTPLGVHLARLPVE 691
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA G +SD
Sbjct: 692 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--GSRSD 747
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AF+ W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 748 HLTVVNAFKGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHSMKAQFAEHLLGAGFVGGRN 807
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++RP R+ V+ T V +HP S+
Sbjct: 808 PKDPDS-NINSDNEKIIKAVICAGLYPKVAKIRPNLGKKRKMVKVYTKSDGLVAIHPKSV 866
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
N ++TD + + +++ +CT V P LL +I++ +DDD+
Sbjct: 867 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISI-----QKDDDQ 917
Query: 1007 DDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQ 1066
+ T+ VD W+ F S A
Sbjct: 918 E----------------------------------------TIAVDEWIVFQSPARIAHL 937
Query: 1067 IYCLRERLSVAILFKVTHPQ 1086
+ LR+ L V + K+ P
Sbjct: 938 VKELRKELDVLLQEKIESPH 957
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 150/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCTQ 242
R KLP + + S + ++QV +ISGETGCGKTTQV QF+L+ KG C+IVCTQ
Sbjct: 207 REKLPSHGMQKELVSLIANHQVTVISGETGCGKTTQVTQFILDDYIKQGKGSACRIVCTQ 266
Query: 243 PRRISATSVAERISVERGE--NIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E G++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 267 PRRISAISVAERVAAERAEPCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD- 325
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++H+++DEIHER+ SD ++ +I+D+L S P L++ILMSATL
Sbjct: 326 -------------PHLSSVSHMVLDEIHERNLQSDVLMTVIKDLLTSRPDLKVILMSATL 372
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 373 NAEKFSEYFGHCPMIHIPGFTFPVVEYLLEDIIEKIR 409
>gi|345789369|ref|XP_003433217.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1 [Canis
lupus familiaris]
Length = 988
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 203/507 (40%), Positives = 296/507 (58%), Gaps = 42/507 (8%)
Query: 504 QENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGA 563
+E P+ + ++K + D M+ ++ + +DL LI L+R I ++ EDGA
Sbjct: 434 KERWPDYVRELRKRYSASTVDVME---------MIDDDKVDLNLIAALIRHIVLEEEDGA 484
Query: 564 ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIIL 623
ILVFLPGW++I+ D L++ F+ SV Q +VFK+ PPG RKI++
Sbjct: 485 ILVFLPGWDNISTLHDLLMSQVMFK---------------SVNQTQVFKKTPPGVRKIVI 529
Query: 624 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAG 683
+TNIAET+ITIDDVVYVID G++KE +D NN+ST+ + WVSKA+AKQR GRAGR Q G
Sbjct: 530 ATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPG 589
Query: 684 ICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIR 743
CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L I FL + +DPP +
Sbjct: 590 HCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLG-GIAYFLSRLMDPPSDEAVS 648
Query: 744 NAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYR 803
+I L ++ AL E++T LG L L V P + KM+ F L CLDP LT+A + ++
Sbjct: 649 LSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK 708
Query: 804 DPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQY 861
DPF +P+ ++K A A + ELA +SD L V+ AFE W+ A++RG E +C +Y
Sbjct: 709 DPFVIPLG--KEKIADARRKELAK--DTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEY 764
Query: 862 FVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
F+SS + ML M+ Q L+ GF+ P+D S + N+ II AV+ AGLYP V
Sbjct: 765 FLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKS-NINSDNEKIIKAVICAGLYPKV 823
Query: 918 ARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
A++R R+ V+ T V +HP S+N + + + ++Y R +++
Sbjct: 824 AKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYN---WLIYHLKMRT-SSIYL 879
Query: 976 RNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+CT V P LL +I++ D E
Sbjct: 880 YDCTEVSPYCLLFFGGDISIQKDNDQE 906
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 181/279 (64%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK +Q +++ + R K +D + + + E +A+ + L +K ++LR I +
Sbjct: 136 ENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVALDQQLLEDLRKKKSDLRYIEMQ 195
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L+ KG C+IVC
Sbjct: 196 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVC 255
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 256 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQS 315
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 316 DS--------------HLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSA 361
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 362 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 400
>gi|109048664|ref|XP_001106252.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform 1
[Macaca mulatta]
Length = 994
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/468 (42%), Positives = 281/468 (60%), Gaps = 33/468 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-------------- 515
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 516 -SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 574
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 575 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 634
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 635 G-GIAYFLSRLMDPPSTEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 693
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 694 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 749
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 750 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 808
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 809 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVN----VEQ 864
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 865 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 912
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 150/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D +QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDKHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 323
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 324 C--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 406
>gi|296227767|ref|XP_002759519.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Callithrix jacchus]
Length = 996
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 197/468 (42%), Positives = 282/468 (60%), Gaps = 33/468 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 472 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-------------- 517
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 518 -SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 576
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 577 EWVSQANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 636
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 637 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 695
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 696 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 751
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
+ W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 752 KGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 810
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++RP R+ V+ T V +HP S+N ++
Sbjct: 811 INSDNEKIIKAVICAGLYPKVAKIRPNLGKKRKMVKVYTKTDGLVAIHPKSVN----VEQ 866
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT + P LL +I++ D E
Sbjct: 867 TDFHYNWLIYHLKMRTSSIYLYDCTEISPYCLLFFGGDISIQKDNDQE 914
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 206 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 265
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 266 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 325
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 326 --------------HLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 371
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 372 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 408
>gi|114589920|ref|XP_001147378.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3 [Pan
troglodytes]
Length = 994
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/468 (42%), Positives = 281/468 (60%), Gaps = 33/468 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-------------- 515
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 516 -SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 574
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 575 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 634
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 635 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 693
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 694 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 749
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 750 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 808
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 809 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 864
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 865 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 912
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 323
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 324 Y--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
>gi|410971146|ref|XP_003992034.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2 [Felis
catus]
Length = 983
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/476 (40%), Positives = 281/476 (59%), Gaps = 48/476 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + +F+
Sbjct: 466 LEMIDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDRFI 524
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 525 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 584
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 585 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 644
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + +I L ++ AL E++T LG L L V
Sbjct: 645 LQIKILRLG-GIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVE 703
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+
Sbjct: 704 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG----------------------- 740
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
W++A++RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 741 ----------WEDARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRN 790
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 791 PKDPKS-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSV 849
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N + + + ++Y R +++ +CT V P LL +I++ D E
Sbjct: 850 NVEQTEFHYN---WLIYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 901
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 182/279 (65%), Gaps = 23/279 (8%)
Query: 127 EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAE--IAMKVESLTSRIEKDANLRQIVEE 184
E EK NQ +++ + R K +D + + + E + + + L +K ++ R I +
Sbjct: 146 EDQEKKLINQEKRTFRIRDKYIDRDSEYLLQENEPDVTLDQQLLEDLQKKKSDPRYIEMQ 205
Query: 185 --RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVC
Sbjct: 206 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVC 265
Query: 241 TQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L
Sbjct: 266 TQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL-- 323
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
Q SRL S+++HI++DEIHER+ SD ++ +I+D+L P L++ILMSA
Sbjct: 324 QSDSRL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSA 371
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
TL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 372 TLNAEKFSEYFGNCPMIHIPGFTFPVAEYLLEDIIEKIR 410
>gi|167830436|ref|NP_001107869.1| probable ATP-dependent RNA helicase DHX36 isoform 2 [Homo sapiens]
gi|119599168|gb|EAW78762.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36, isoform CRA_b [Homo
sapiens]
Length = 994
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/468 (42%), Positives = 281/468 (60%), Gaps = 33/468 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-------------- 515
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 516 -SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 574
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 575 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 634
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 635 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 693
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 694 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 749
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 750 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 808
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 809 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 864
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 865 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 912
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 323
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 324 Y--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
>gi|402861180|ref|XP_003894982.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2 [Papio
anubis]
Length = 994
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/468 (42%), Positives = 281/468 (60%), Gaps = 33/468 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-------------- 515
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 516 -SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 574
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 575 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 634
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 635 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 693
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 694 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 749
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 750 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 808
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 809 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVN----VEQ 864
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 865 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 912
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 150/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D +QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDKHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 323
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 324 C--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 406
>gi|296227771|ref|XP_002759521.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3
[Callithrix jacchus]
Length = 981
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/468 (41%), Positives = 277/468 (59%), Gaps = 48/468 (10%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 472 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 530
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 531 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 590
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 591 EWVSQANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 650
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 651 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 709
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+
Sbjct: 710 FGALFCCLDPVLTIAASLSFKDPFVIPLG------------------------------- 738
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 739 --WEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 795
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++RP R+ V+ T V +HP S+N ++
Sbjct: 796 INSDNEKIIKAVICAGLYPKVAKIRPNLGKKRKMVKVYTKTDGLVAIHPKSVN----VEQ 851
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT + P LL +I++ D E
Sbjct: 852 TDFHYNWLIYHLKMRTSSIYLYDCTEISPYCLLFFGGDISIQKDNDQE 899
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 206 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 265
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 266 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 325
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 326 --------------HLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 371
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 372 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 408
>gi|40644065|emb|CAE11803.1| putative DExH/D RNA helicase [Homo sapiens]
Length = 994
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/468 (42%), Positives = 281/468 (60%), Gaps = 33/468 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-------------- 515
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 516 -SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 574
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 575 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 634
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 635 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 693
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 694 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 749
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 750 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 808
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 809 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 864
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 865 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 912
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 323
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 324 Y--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
>gi|114589924|ref|XP_001147527.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 5 [Pan
troglodytes]
Length = 979
Score = 348 bits (894), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 194/468 (41%), Positives = 276/468 (58%), Gaps = 48/468 (10%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG------------------------------- 736
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 737 --WEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 793
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 794 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 849
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 850 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 897
Score = 206 bits (523), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 158/231 (68%), Gaps = 21/231 (9%)
Query: 173 EKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+K +LR I + R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++
Sbjct: 190 KKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI 249
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVF 285
KG C+IVCTQPRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++
Sbjct: 250 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILY 309
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++L+ L S +S+++HI++DEIHER+ SD ++ +++D+L
Sbjct: 310 CTTGIILQWLQSDPY--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLN 355
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 356 FRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
>gi|402861182|ref|XP_003894983.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3 [Papio
anubis]
Length = 979
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 194/468 (41%), Positives = 276/468 (58%), Gaps = 48/468 (10%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG------------------------------- 736
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 737 --WEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 793
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 794 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVN----VEQ 849
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 850 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 897
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 157/231 (67%), Gaps = 21/231 (9%)
Query: 173 EKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+K +LR I + R KLP + + + +D +QV +ISGETGCGKTTQV QF+L++
Sbjct: 190 KKKNDLRYIEMQHFREKLPSYGMQKELVNLIDKHQVTVISGETGCGKTTQVTQFILDNYI 249
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVF 285
KG C+IVCTQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++
Sbjct: 250 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILY 309
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++L+ L S +S+++HI++DEIHER+ SD ++ +++D+L
Sbjct: 310 CTTGIILQWLQSDPC--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLN 355
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 356 FRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 406
>gi|119599169|gb|EAW78763.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36, isoform CRA_c [Homo
sapiens]
Length = 979
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 194/468 (41%), Positives = 276/468 (58%), Gaps = 48/468 (10%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG------------------------------- 736
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 737 --WEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 793
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 794 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 849
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 850 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 897
Score = 206 bits (523), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 158/231 (68%), Gaps = 21/231 (9%)
Query: 173 EKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+K +LR I + R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++
Sbjct: 190 KKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI 249
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVF 285
KG C+IVCTQPRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++
Sbjct: 250 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILY 309
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++L+ L S +S+++HI++DEIHER+ SD ++ +++D+L
Sbjct: 310 CTTGIILQWLQSDPY--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLN 355
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 356 FRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
>gi|403265719|ref|XP_003925064.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Saimiri boliviensis boliviensis]
Length = 997
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/468 (41%), Positives = 281/468 (60%), Gaps = 33/468 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 473 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-------------- 518
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
SV Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 519 -SVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 577
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 578 EWVSQANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 637
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 638 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 696
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 697 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 752
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
+ W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 753 KGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 811
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 812 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVSVHPKSVN----VEQ 867
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT + P LL +I++ D E
Sbjct: 868 TDFHYNWLIYHLKMRTSSIYLYDCTEISPYCLLFFGGDISIQKDNDQE 915
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 177/302 (58%), Gaps = 41/302 (13%)
Query: 122 PPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPK-----MSKAEIAMKVESLTSRIEKDA 176
P D G E N R K + + + K +K+ I E L E D
Sbjct: 122 PEDHGYGAEVSTKNTPRSEKKLDNQETKLINQEKKVFRIRNKSYIDRDSEYLLQENEPDG 181
Query: 177 NL-RQIVEE----------------RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTT 219
L +Q++E+ R KLP + + + +D++QV +ISGETGCGKTT
Sbjct: 182 TLDQQLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTT 241
Query: 220 QVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLES 275
QV QF+L++ KG C+IVCTQPRRISA SVAER++ ER E+ G+ + GY+IRL+S
Sbjct: 242 QVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS 301
Query: 276 K-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+ K SI++CT G++L+ L S +S+++HII+DEIHER+ SD
Sbjct: 302 RLPRKQGSILYCTTGIILQWLQSDP--------------HLSSVSHIILDEIHERNLQSD 347
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++ +++D+L L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LED++
Sbjct: 348 VLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 407
Query: 395 LK 396
++
Sbjct: 408 IR 409
>gi|363737300|ref|XP_003641832.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Gallus gallus]
Length = 981
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/481 (40%), Positives = 286/481 (59%), Gaps = 38/481 (7%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+
Sbjct: 449 LEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK------ 502
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
SV Q +VFK+ PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D
Sbjct: 503 ---------SVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQ 553
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 554 NNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 613
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL K +DPP + AI L ++ AL E++T LG L L V
Sbjct: 614 LQIKILKLG-GIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVE 672
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + EL+ +SD
Sbjct: 673 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELSK--NTKSD 728
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AF W+ ++RG E +C +YF+S + ML M+ Q L+ GF+
Sbjct: 729 HLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRD 788
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D S + N+ ++ AV+ AGLYP VA++RP R+ V+ T V +HP S+
Sbjct: 789 PKDPKSNT-NSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSV 847
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDE 1006
N + + + +VY R +++ +CT V P LL +I++ +D D+
Sbjct: 848 NVEETEFHYN---WLVYHLKMRT-SSIYLYDCTEVSPYCLLFFGGDISI-----QKDKDQ 898
Query: 1007 D 1007
D
Sbjct: 899 D 899
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 177/287 (61%), Gaps = 41/287 (14%)
Query: 137 SRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE------------ 184
+ K++K KR +P + K + VE L + ++DA+L + ++E
Sbjct: 131 AEKAEKAPVKR-----RPILQKTFLDQDVEYLFEKNDQDADLDEQLKEDLRKKKSDPRYI 185
Query: 185 -----RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCK 237
R KLP + + + +++N+V +ISGETGCGKTTQV QF+L+ KG TC+
Sbjct: 186 EMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCR 245
Query: 238 IVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRL 294
IVCTQPRRISA SVAER++ ER E G+ + GY+IRL+S+ K SI++CT G++L+
Sbjct: 246 IVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQW 305
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L S +S+++H+++DEIHER+ SD +++II+D+L L++IL
Sbjct: 306 LQSD--------------KHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVIL 351
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESN 401
MSATL+A++FS+YF CP+I +PGFT+PV + LEDV+ L+ N
Sbjct: 352 MSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRYTPEN 398
>gi|403265721|ref|XP_003925065.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3
[Saimiri boliviensis boliviensis]
Length = 982
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/468 (41%), Positives = 276/468 (58%), Gaps = 48/468 (10%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 473 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 531
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 532 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 591
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 592 EWVSQANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 651
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 652 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 710
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+
Sbjct: 711 FGALFCCLDPVLTIAASLSFKDPFVIPLG------------------------------- 739
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 740 --WEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 796
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 797 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVSVHPKSVN----VEQ 852
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT + P LL +I++ D E
Sbjct: 853 TDFHYNWLIYHLKMRTSSIYLYDCTEISPYCLLFFGGDISIQKDNDQE 900
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 177/302 (58%), Gaps = 41/302 (13%)
Query: 122 PPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPK-----MSKAEIAMKVESLTSRIEKDA 176
P D G E N R K + + + K +K+ I E L E D
Sbjct: 122 PEDHGYGAEVSTKNTPRSEKKLDNQETKLINQEKKVFRIRNKSYIDRDSEYLLQENEPDG 181
Query: 177 NL-RQIVEE----------------RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTT 219
L +Q++E+ R KLP + + + +D++QV +ISGETGCGKTT
Sbjct: 182 TLDQQLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTT 241
Query: 220 QVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLES 275
QV QF+L++ KG C+IVCTQPRRISA SVAER++ ER E+ G+ + GY+IRL+S
Sbjct: 242 QVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS 301
Query: 276 K-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+ K SI++CT G++L+ L S +S+++HII+DEIHER+ SD
Sbjct: 302 RLPRKQGSILYCTTGIILQWLQSDP--------------HLSSVSHIILDEIHERNLQSD 347
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++ +++D+L L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LED++
Sbjct: 348 VLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 407
Query: 395 LK 396
++
Sbjct: 408 IR 409
>gi|449437476|ref|XP_004136518.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1000
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 193/464 (41%), Positives = 274/464 (59%), Gaps = 17/464 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+E + IC +GAILVFL GW+DI+K D++ AN + D+ KF+++PLH +
Sbjct: 487 LDLSLVESTVEYICRRESNGAILVFLTGWDDISKLLDKVKANNYLGDSGKFLVLPLHGSM 546
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P++ Q+++F PPPG RKI+L+TNIAE++ITIDDVVYVID G+ KE SYD N ++ L
Sbjct: 547 PTINQREIFDSPPPGKRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLP 606
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR Q G+CY LY ++ ++ +Q+PEI R P++ELCL +K L
Sbjct: 607 SWISKASAHQRRGRAGRVQPGVCYRLYPKIIHDAMLQYQLPEILRTPLQELCLHIKSLQL 666
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ FL + L PP S+ ++NAI +L+ IGAL E++T LG L L + P + KML
Sbjct: 667 G-TVGSFLAQALQPPDSLAVQNAIELLKTIGALDDMEELTPLGRHLCTLPLDPNIGKMLL 725
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ CL+PALT+A A +RDPF LPI N K+ A AK A SD +A++ AF
Sbjct: 726 MGSIFQCLNPALTIAAAMAHRDPFILPI--NRKEEANDAKKSFAG--DSCSDHVALLKAF 781
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP 902
E WK+AK+ G E FC F+S + M+ MR Q L GF+ + ++N
Sbjct: 782 EGWKDAKRNGAERSFCWDNFLSPVTLQMMDDMRMQFLDLLSDIGFVNKSRGPSAYNQYSQ 841
Query: 903 GI--IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
+ + AVL AGLYP V + + K + + G KV +HP S+N + P
Sbjct: 842 DLEMVCAVLCAGLYPNVVQCKRRGKRTAFYTKEVG--KVDIHPGSVNAGVHIFP---LPY 896
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDD 1004
MVY E + +++R+ T + LLL + P N D
Sbjct: 897 MVYSEKVK-TTSIYIRDSTNISDYALLLFGGNL----VPTNTGD 935
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 148/217 (68%), Gaps = 16/217 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
L+ ++ R +LP S K + NQV+++SGETGCGKTTQ+PQF+LE SK G
Sbjct: 221 LKAMLAFREQLPAFSVKSEFIKAMTENQVLVVSGETGCGKTTQLPQFILEEEISKLRGAD 280
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
C+I+CTQPRRISA SVA RIS ERGEN+G+ +GY+IRLE+K + ++FCT GVLLR L
Sbjct: 281 CRIICTQPRRISAISVAARISSERGENLGETVGYQIRLEAKQSAQTRLLFCTTGVLLRQL 340
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
V ++ ++H++VDEIHER DF+L I+R++LP P LRLILM
Sbjct: 341 VQD--------------PQLTGVSHLLVDEIHERGMNEDFLLIILRNLLPQRPDLRLILM 386
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SAT++AD FS+YFG P + +PG T+ V F+LEDVL
Sbjct: 387 SATINADLFSKYFGNAPTLHIPGKTFAVSEFFLEDVL 423
>gi|414871115|tpg|DAA49672.1| TPA: hypothetical protein ZEAMMB73_647732 [Zea mays]
Length = 1150
Score = 345 bits (886), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 187/454 (41%), Positives = 269/454 (59%), Gaps = 13/454 (2%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+E + IC +GAILVFL GW++I+K D++ N F ++F+++PLH +
Sbjct: 637 LDLSLVENTIEYICRYEAEGAILVFLTGWDEISKLLDKIKGNNFLGSPNRFLVLPLHGSM 696
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q+++F RPP RKI+L+TNIAE++ITIDDVVYVID G+ KE SYD N ++ L
Sbjct: 697 PTVNQREIFDRPPANMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLP 756
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR Q G CY LY ++ ++P FQ+PEI R P++ELCL +K L
Sbjct: 757 SWISKASAHQRRGRAGRVQPGFCYRLYPKIIHDAMPQFQLPEILRTPLQELCLTIKSLQL 816
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ FL K+L PP ++++NAI +L+ IGAL E++T LG L L + P + KML
Sbjct: 817 GA-VSSFLAKSLQPPDPLSVKNAIELLKTIGALDDMEELTSLGRHLCTLPLDPNIGKMLL 875
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ CLDP LT+A A YR+PF LPI E+ A F S SD +A++ AF
Sbjct: 876 MGSVFQCLDPVLTIAAALAYRNPFVLPIDRKEEADAVKRSFAGDSC----SDHIALVKAF 931
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN--AR 900
WK+AK+ G+E FC + F+S + M+ MR Q L GF+ + ++N
Sbjct: 932 VAWKDAKRSGRERTFCWESFLSPMTLKMMDDMRNQFFDLLSDIGFVSKTAGVKAYNRYGN 991
Query: 901 VPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
++ AVL AGLYP V + + K + + G KV +HP S+N +F P
Sbjct: 992 DLEMVCAVLCAGLYPNVVQCKRRGKRTAFYTKDVG--KVDIHPSSVN---AFVNQFPLPF 1046
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
+VY E + ++VR+ T + LLL ++
Sbjct: 1047 LVYSEKVK-TASIYVRDSTNISDYALLLFGGSLS 1079
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 186/306 (60%), Gaps = 33/306 (10%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+ K +++ ++ L + + A+ R + R KLP S ++ V +NQV++ISGETGC
Sbjct: 350 IDKEKLSSQLRELQNSRKTTASARSMQSFREKLPAFSMREGFLKAVAANQVLVISGETGC 409
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQ+PQF+LE + +G C I+CTQPRRISA SVA R+S ERGE +G+ +GY+IRL
Sbjct: 410 GKTTQLPQFILEEEINSLRGADCNIICTQPRRISAISVAARVSAERGEELGEAVGYQIRL 469
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
ESK + ++FCT GVLLR LV + D+ ++H++VDEIHER
Sbjct: 470 ESKRSAQTRLLFCTTGVLLRRLVQE--------------PDLIGVSHLLVDEIHERGMNE 515
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
DF++ I+RD+LP P LRL+LMSAT++A+ FS YFG PV+ +PGFT+PV +LEDVL
Sbjct: 516 DFLIIILRDLLPRRPDLRLVLMSATINAELFSMYFGDAPVMHIPGFTFPVAELFLEDVLE 575
Query: 394 ILK---SAESNHLDSAS------------LIVPNEDPELTEE--NKSTLDEAISLAWSND 436
+ ++E ++ +S L ED ++T+E N S+ AWS
Sbjct: 576 KTRYRINSERDNFAGSSRRKRFSSVKSDPLSDVFEDIDITKEYGNYSSSTRQSLEAWSAA 635
Query: 437 EFDMLL 442
E D+ L
Sbjct: 636 ELDLSL 641
>gi|23243423|gb|AAH36035.1| DHX36 protein [Homo sapiens]
gi|123980214|gb|ABM81936.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36 [synthetic construct]
Length = 979
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 194/468 (41%), Positives = 275/468 (58%), Gaps = 48/468 (10%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNNSTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG------------------------------- 736
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 737 --WEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 793
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 794 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 849
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 850 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 897
Score = 206 bits (523), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 158/231 (68%), Gaps = 21/231 (9%)
Query: 173 EKDANLRQIVEE--RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+K +LR I + R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++
Sbjct: 190 KKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI 249
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVF 285
KG C+IVCTQPRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++
Sbjct: 250 ERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILY 309
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++L+ L S +S+++HI++DEIHER+ SD ++ +++D+L
Sbjct: 310 CTTGIILQWLQSDPY--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLN 355
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 356 FRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
>gi|449501156|ref|XP_004161293.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 999
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 193/464 (41%), Positives = 274/464 (59%), Gaps = 17/464 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+E + IC +GAILVFL GW+DI+K D++ AN + D+ KF+++PLH +
Sbjct: 486 LDLSLVESTVEYICRREGNGAILVFLTGWDDISKLLDKVKANNYLGDSGKFLVLPLHGSM 545
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P++ Q+++F PPPG RKI+L+TNIAE++ITIDDVVYVID G+ KE SYD N ++ L
Sbjct: 546 PTINQREIFDSPPPGKRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLP 605
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR Q G+CY LY ++ ++ +Q+PEI R P++ELCL +K L
Sbjct: 606 SWISKASAHQRRGRAGRVQPGVCYRLYPKIIHDAMLQYQLPEILRTPLQELCLHIKSLQL 665
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ FL + L PP S+ ++NAI +L+ IGAL E++T LG L L + P + KML
Sbjct: 666 G-TVGSFLAQALQPPDSLAVQNAIELLKTIGALDDMEELTPLGRHLCTLPLDPNIGKMLL 724
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ CL+PALT+A A +RDPF LPI N K+ A AK A SD +A++ AF
Sbjct: 725 MGSIFQCLNPALTIAAAMAHRDPFILPI--NRKEEANDAKKSFAG--DSCSDHVALLKAF 780
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP 902
E WK+AK+ G E FC F+S + M+ MR Q L GF+ + ++N
Sbjct: 781 EGWKDAKRNGAERSFCWDNFLSPVTLQMMDDMRMQFLDLLSDIGFVNKSRGPSAYNQYSQ 840
Query: 903 GI--IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
+ + AVL AGLYP V + + K + + G KV +HP S+N + P
Sbjct: 841 DLEMVCAVLCAGLYPNVVQCKRRGKRTAFYTKEVG--KVDIHPGSVNAGVHIFP---LPY 895
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDD 1004
MVY E + +++R+ T + LLL + P N D
Sbjct: 896 MVYSEKVK-TTSIYIRDSTNISDYALLLFGGNL----VPTNTGD 934
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 148/217 (68%), Gaps = 16/217 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
L+ ++ R +LP S K + NQV+++SGETGCGKTTQ+PQF+LE SK G
Sbjct: 221 LKAMLAFREQLPAFSVKSEFIKAMTENQVLVVSGETGCGKTTQLPQFILEEEISKLRGAD 280
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
C+I+CTQPRRISA SVA RIS ERGEN+G+ +GY+IRLE+K + ++FCT GVLLR L
Sbjct: 281 CRIICTQPRRISAISVAARISSERGENLGETVGYQIRLEAKQSAQTRLLFCTTGVLLRQL 340
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
V ++ ++H++VDEIHER DF+L I+R++LP P LRLILM
Sbjct: 341 VQD--------------PQLTGVSHLLVDEIHERGMNEDFLLIILRNLLPQRPDLRLILM 386
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SAT++AD FS+YFG P + +PG T+ V F+LEDVL
Sbjct: 387 SATINADLFSKYFGNAPTLHIPGKTFAVSEFFLEDVL 423
>gi|357146579|ref|XP_003574042.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Brachypodium distachyon]
Length = 869
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/492 (39%), Positives = 290/492 (58%), Gaps = 19/492 (3%)
Query: 514 IKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWED 573
IK +N +S ++ ++ + N + D+ +E + IC +GAILVFL GW++
Sbjct: 331 IKSERDNFQGNSRRK----RFASVKNDPISDVFEVEGTIEYICRHDGEGAILVFLTGWDE 386
Query: 574 INKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAIT 633
I+K D++ N +++KF+++PLH +P+V Q+++F + P RKI+L+TNIAE++IT
Sbjct: 387 ISKLVDKIKGNNLLGNSNKFLVLPLHGSMPTVNQREIFDKAPTNMRKIVLATNIAESSIT 446
Query: 634 IDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR 693
IDDVVYVID G+ KE SYD N ++ L SW+SKASA QR GRAGR Q G+CY LY ++
Sbjct: 447 IDDVVYVIDCGKAKETSYDALNKLACLMPSWISKASAHQRRGRAGRVQPGVCYRLYPKVI 506
Query: 694 AASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIG 753
++P FQ+PEI R P++ELCL +K L + FL K+L PP ++++NAI +L+ IG
Sbjct: 507 HDAMPQFQLPEILRTPLQELCLTIKSLQLGA-VASFLAKSLQPPDPLSVKNAIELLKTIG 565
Query: 754 ALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPN 813
AL E++T LG+ L L + P + KML + CLDPALT+A A YR+PF LPI
Sbjct: 566 ALDDLEELTYLGQHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVLPIDRK 625
Query: 814 EKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLG 873
E+ A F S SD +A++ AFE WK+AK G+E FC + F+S + M+
Sbjct: 626 EEADAVKRSFAGDSC----SDHIALLKAFEAWKDAKHSGRERSFCWENFLSPMTLKMMDD 681
Query: 874 MRKQLQTELIKNGFIPED--VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
MR Q L GF+ + V + +H + ++ AVL AGLYP V + + K +
Sbjct: 682 MRNQFFDLLSDIGFVSKTRGVKAYNHYGKDLEMVSAVLCAGLYPNVIQCKKRGKRTAFYT 741
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
+ G KV +HP S+N + + P +VY E + ++VR+ T + LLL
Sbjct: 742 KDVG--KVDIHPSSVNAGV---QQFPLPYLVYSEKVK-TASIYVRDSTNISDYALLLFGG 795
Query: 992 EIAVAPAPDNED 1003
+++P+ ED
Sbjct: 796 --SLSPSKTGED 805
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 155/239 (64%), Gaps = 18/239 (7%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+ K +++ ++ L S + + R + R KLP ++ V SNQV++ISGETGC
Sbjct: 102 VDKQKLSSQLRDLQSSKKMMPSARAMQSFREKLPAFKMREEFLKAVASNQVLVISGETGC 161
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQ+PQF+LE +G C I+CTQPRRISA SVA R+ ERGE +G+ +GY+IRL
Sbjct: 162 GKTTQLPQFILEEEIDNLRGADCSIICTQPRRISAISVAARVGSERGEELGETVGYQIRL 221
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
ESK + ++FCT GVLLR L D+ ++H++VDEIHER
Sbjct: 222 ESKRSTQTRLLFCTTGVLLRKL----------------DPDLVGVSHLLVDEIHERGMNE 265
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
DF++ I+RD+LP P LRL+LMSAT++A+ FS+YFG P++ +PGFT+P+ +LED+L
Sbjct: 266 DFLIIILRDLLPRRPDLRLVLMSATINAELFSKYFGEAPIMHIPGFTFPIAELFLEDIL 324
>gi|356534552|ref|XP_003535817.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 990
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 192/453 (42%), Positives = 269/453 (59%), Gaps = 13/453 (2%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
IDL L+E + IC + GAILVFL GW++I+K D+L N D+SKF+I+PLH +
Sbjct: 482 IDLGLVEATIEYICRNEAGGAILVFLTGWDEISKLLDKLKGNNLVGDSSKFLILPLHGSM 541
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q ++F RPPP RKI+L+TNIAE++ITIDDVVYVID G+ KE SYD N ++ L
Sbjct: 542 PTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLP 601
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR Q G+CY LY +L ++P +Q+ EI R P++ELCL +K L
Sbjct: 602 SWISKASAHQRRGRAGRVQPGVCYRLYPKLIHDAMPQYQLAEILRTPLQELCLHIKSLQL 661
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ FL+K L PP + ++NAI +L+ IGAL E++T LG L + + P + KML
Sbjct: 662 G-TVGSFLEKALQPPDPLAVKNAIELLKTIGALDEQEELTPLGRHLCNIPLDPNIGKMLL 720
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ CL+PALT+A A YR+PF LPI N K+ A AAK A SD LA++ AF
Sbjct: 721 MGSIFQCLNPALTIAAALAYRNPFVLPI--NRKEEADAAKQSFAG--DSCSDHLALLKAF 776
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP 902
E WK AK+ G E F F+S + ++ MR Q L GF+ + + ++N
Sbjct: 777 EGWKEAKRSGNEKQFGWDNFLSLATLRLIDDMRMQFLNLLSDIGFVDKSRGATAYNQYSH 836
Query: 903 GI--IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
+ + A+L AGLYP V + + K + + G KV +HP S+N + P
Sbjct: 837 DLEMVCAILCAGLYPNVVQCKRRGKRTAFYTKEVG--KVDIHPASVNAGVHLFP---LPY 891
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
MVY E + +++R+ T + LLL +
Sbjct: 892 MVYSEKVK-TTSIYIRDSTNISDYALLLFGGNL 923
Score = 232 bits (592), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 157/238 (65%), Gaps = 16/238 (6%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
SK ++++ ++ ++ +L+++ R KLP K V NQV+++SGETGCG
Sbjct: 196 SKEKLSVALKEGQELVQASDSLKEMKSFREKLPAFKMKSEFLKAVQENQVLVVSGETGCG 255
Query: 217 KTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
KTTQ+PQF+LE S +G C I+CTQPRR+SA SVA RIS ERGE++G+ +GY+IRLE
Sbjct: 256 KTTQLPQFILEEEISCLRGADCNIICTQPRRVSAISVAARISAERGESLGEAVGYQIRLE 315
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
SK + ++FCT GVLLR LV D+ ++H++VDEIHER D
Sbjct: 316 SKRSAETRLLFCTTGVLLRQLVQD--------------PDLIGVSHLLVDEIHERGMNED 361
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
F++ I+RD+LP P LRLILMSAT++AD FS+YF P + +PGFTYPV +LEDVL
Sbjct: 362 FLIIILRDLLPRRPDLRLILMSATINADMFSKYFANAPTMHIPGFTYPVAEHFLEDVL 419
>gi|30686606|ref|NP_850255.1| helicase associated domain-containing protein [Arabidopsis
thaliana]
gi|330254083|gb|AEC09177.1| helicase associated domain-containing protein [Arabidopsis
thaliana]
Length = 995
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/452 (42%), Positives = 274/452 (60%), Gaps = 18/452 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
ID+ L+E + IC GAILVFL GW++I+K +++ N F D+SKF+++PLH +
Sbjct: 485 IDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSM 544
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q+++F RPPP RKI+L+TNIAE++ITIDDVVYV+D G+ KE SYD N V+ L
Sbjct: 545 PTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLP 604
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR QAG+CY LY ++ + P +Q+PEI R P++ELCL +K L
Sbjct: 605 SWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQV 664
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+I FL K L PP ++ + NAI +L+ IGAL+ E++T LG L L V P + KML
Sbjct: 665 G-SIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLL 723
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ C++PALT+A A YR PF LP+ N K+ A AK A SD +A++ A+
Sbjct: 724 IGAIFQCVNPALTIAAALAYRSPFVLPL--NRKEEADEAKRYFAG--DSCSDHIALLKAY 779
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHN 898
E +++AK+ G E FC Q F+S + M+ MR Q L GF+ P + S++
Sbjct: 780 EGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYD 839
Query: 899 ARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC 958
+I AVL AGLYP V + + K + + G KV +HP S+N +++
Sbjct: 840 ME---MISAVLCAGLYPNVVQCKRRGKRTAFYTKELG--KVDIHPGSVNARVNLF---SL 891
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P +VY E + +++R+ T + LL+
Sbjct: 892 PYLVYSEKVK-TTSVYIRDSTNISDYALLMFG 922
Score = 236 bits (601), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/258 (46%), Positives = 170/258 (65%), Gaps = 20/258 (7%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+ K + + ++ +++ +++ + R KLP K+ ++V NQV+++SGETGC
Sbjct: 196 LEKEKFSFALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGC 255
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQ+PQF+LE S +G C I+CTQPRRISA SVA RIS ERGE+IG+++GY+IRL
Sbjct: 256 GKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRL 315
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
ESK + ++FCT GVLLR RL E N ++ ++H++VDEIHER
Sbjct: 316 ESKRSDQTRLLFCTTGVLLR--------RLIEDPN------LTNVSHLLVDEIHERGMNE 361
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
DF+L I+RD+LP P LRLILMSAT++AD FS YFG P + +PGFT+PV +LEDVL
Sbjct: 362 DFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLE 421
Query: 394 I----LKSAESNHLDSAS 407
+KS++S + +S
Sbjct: 422 KSRYNIKSSDSGNYQGSS 439
>gi|356498671|ref|XP_003518173.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 989
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/455 (41%), Positives = 271/455 (59%), Gaps = 17/455 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
IDL L+E + IC + GAILVFL GW++I+K D+L N D SKF+I+PLH +
Sbjct: 477 IDLGLVEATIEYICRNEAGGAILVFLTGWDEISKLLDKLKGNNLVGDPSKFLILPLHGSM 536
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q ++F+RPPP RKI+L+TNIAE++ITIDDVVYVID G+ KE SYD N ++ L
Sbjct: 537 PTVNQCEIFERPPPNKRKIVLATNIAESSITIDDVVYVIDWGKAKETSYDALNKLACLLP 596
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR Q G+CY LY +L ++P +Q+ EI R P++ELCL +K L
Sbjct: 597 SWISKASAHQRRGRAGRVQPGVCYRLYPKLIHDAMPQYQLAEILRTPLQELCLHIKSLQL 656
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ FL+K L PP + ++NAI +L+ IGAL E++T LG+ L + + P + KML
Sbjct: 657 G-TVGSFLEKALQPPDPLAVKNAIELLKTIGALDEQEELTPLGQHLCNIPLDPNIGKMLL 715
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ--SDQLAVIA 840
+ CL+PALT+A + YR+PF LPI N K+ A AAK + G SD +A++
Sbjct: 716 MGSIFQCLNPALTIAASLAYRNPFVLPI--NRKEEADAAK----QFFAGDSCSDHIALLK 769
Query: 841 AFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNAR 900
AFE WK AK+ G E FC F+S + ++ MR Q L GF+ + + +N
Sbjct: 770 AFEGWKEAKRSGNEKQFCWDNFLSPATLRLIDNMRMQFLNLLSDIGFVDKSRGANVYNQY 829
Query: 901 VPGI--IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC 958
+ + A+L AGLYP V + + K + + G KV +HP S+N +
Sbjct: 830 SHDLEMVCAILCAGLYPNVVQCKRRGKRTAFYTKEVG--KVDIHPASVNAGIYLFP---L 884
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
P MVY E + +++++ T + LLL +
Sbjct: 885 PYMVYSEKVK-TTSIYIKDSTNISDYALLLFGGNL 918
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 158/238 (66%), Gaps = 16/238 (6%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
SK ++++ ++ ++ +L+++ R KLP K V NQV+++SGETGCG
Sbjct: 190 SKEKLSVALKERQELVQASDSLKEMKSFREKLPAFKMKSEFLKAVQENQVLVVSGETGCG 249
Query: 217 KTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
KTTQ+PQFLLE S +G C I+CTQPRR+SA SVA RIS ERGE++G+ +GY+IRLE
Sbjct: 250 KTTQLPQFLLEEEISCLRGADCNIICTQPRRVSAISVAARISAERGESLGEAVGYQIRLE 309
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
SK + ++FCT GVLLR LV D++ ++H++VDEIHER D
Sbjct: 310 SKRSAETRLLFCTTGVLLRQLVQD--------------PDLTGVSHLLVDEIHERGMNED 355
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
F++ I+RD+LP P LRLILMSAT++AD FS+YF P + +PGFTYPV +LEDVL
Sbjct: 356 FLIIILRDLLPRRPDLRLILMSATINADMFSKYFANAPTMHIPGFTYPVAEHFLEDVL 413
>gi|4510377|gb|AAD21465.1| putative ATP-dependent RNA helicase A [Arabidopsis thaliana]
Length = 993
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/452 (42%), Positives = 274/452 (60%), Gaps = 18/452 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
ID+ L+E + IC GAILVFL GW++I+K +++ N F D+SKF+++PLH +
Sbjct: 483 IDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSM 542
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q+++F RPPP RKI+L+TNIAE++ITIDDVVYV+D G+ KE SYD N V+ L
Sbjct: 543 PTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLP 602
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR QAG+CY LY ++ + P +Q+PEI R P++ELCL +K L
Sbjct: 603 SWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQV 662
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+I FL K L PP ++ + NAI +L+ IGAL+ E++T LG L L V P + KML
Sbjct: 663 G-SIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLL 721
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ C++PALT+A A YR PF LP+ N K+ A AK A SD +A++ A+
Sbjct: 722 IGAIFQCVNPALTIAAALAYRSPFVLPL--NRKEEADEAKRYFAG--DSCSDHIALLKAY 777
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHN 898
E +++AK+ G E FC Q F+S + M+ MR Q L GF+ P + S++
Sbjct: 778 EGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYD 837
Query: 899 ARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC 958
+I AVL AGLYP V + + K + + G KV +HP S+N +++
Sbjct: 838 ME---MISAVLCAGLYPNVVQCKRRGKRTAFYTKELG--KVDIHPGSVNARVNLF---SL 889
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P +VY E + +++R+ T + LL+
Sbjct: 890 PYLVYSEKVK-TTSVYIRDSTNISDYALLMFG 920
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 168/258 (65%), Gaps = 22/258 (8%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+ K + + ++ +++ +++ + R KLP K+ ++V NQV+++SGETGC
Sbjct: 196 LEKEKFSFALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGC 255
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQ+PQF+LE S +G C I+CTQPRRISA SVA RIS ERGE+IG+++GY+IRL
Sbjct: 256 GKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRL 315
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
ESK + ++FCT GVLLR L +++ ++H++VDEIHER
Sbjct: 316 ESKRSDQTRLLFCTTGVLLRRL----------------DPNLTNVSHLLVDEIHERGMNE 359
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
DF+L I+RD+LP P LRLILMSAT++AD FS YFG P + +PGFT+PV +LEDVL
Sbjct: 360 DFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLE 419
Query: 394 I----LKSAESNHLDSAS 407
+KS++S + +S
Sbjct: 420 KSRYNIKSSDSGNYQGSS 437
>gi|297823399|ref|XP_002879582.1| helicase domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297325421|gb|EFH55841.1| helicase domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 996
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/455 (41%), Positives = 274/455 (60%), Gaps = 18/455 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
ID+ L+E + IC GAILVFL GW++I+K +++ N D+SKF+++PLH +
Sbjct: 484 IDVDLVEATIEYICRLEGGGAILVFLTGWDEISKLLEKINGNNLLGDSSKFLVLPLHGSM 543
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q+++F RPPP RKI+L+TNIAE++ITIDDVVYV+D G+ KE SYD N V+ L
Sbjct: 544 PTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLP 603
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR QAG+CY LY ++ + P +Q+PEI R P++ELCL +K L
Sbjct: 604 SWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQV 663
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+I FL K L PP ++ + NAI +L+ IGAL+ E++T LG L L V P + KML
Sbjct: 664 G-SIGSFLAKALQPPDALAVENAIELLKTIGALNDMEELTPLGRHLCTLPVDPNIGKMLL 722
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ C++PALT+A A YR PF LP+ N K+ A AK A SD +A++ A+
Sbjct: 723 IGAIFQCVNPALTIAAALAYRSPFVLPL--NRKEEADEAKRYFAG--DSCSDHIALLKAY 778
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHN 898
E +++AK+ G E FC Q F+S + M+ MR Q L GF+ P + SH+
Sbjct: 779 EGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSHD 838
Query: 899 ARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC 958
+I A+L AGLYP V + + K + + G KV +HP S+N +++
Sbjct: 839 ME---MISAILCAGLYPNVVQCKRRGKRTAFYTKELG--KVDIHPGSVNARVNLFS---L 890
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
P +VY E + +++R+ T + LL+ +
Sbjct: 891 PYLVYSEKVK-TTSVYIRDSTNISDYALLMFGGNL 924
Score = 236 bits (602), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 133/315 (42%), Positives = 191/315 (60%), Gaps = 37/315 (11%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+ K + ++ ++ +++ +++ + R KLP K+ ++V NQV+++SGETGC
Sbjct: 195 LQKEKFSVALKDRQEKLKATESVKALHAFREKLPAFKMKEGFLNSVSENQVLVVSGETGC 254
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQ+PQFLLE S +G C I+CTQPRRISA SVA RIS ERGE+IG+++GY+IRL
Sbjct: 255 GKTTQLPQFLLEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRL 314
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
ESK + ++FCT GVLLR RL E N ++ ++H++VDEIHER
Sbjct: 315 ESKRSDQTRLLFCTTGVLLR--------RLIEDPN------LTNVSHLLVDEIHERGMNE 360
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
DF+L I+RD+LP P LRLILMSAT++AD FS YFG P + +PGFT+PV +LEDVL
Sbjct: 361 DFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLE 420
Query: 394 ----ILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAISL----------------AW 433
+KS++S + S D E +++ +TL E I + AW
Sbjct: 421 KSRYSIKSSDSGNYQGNSR-GRRRDSESKKDDLTTLFEDIDINSHYKSYSSATRNSLEAW 479
Query: 434 SNDEFDMLLELVSLE 448
S + D+ L ++E
Sbjct: 480 SGAQIDVDLVEATIE 494
>gi|302781811|ref|XP_002972679.1| hypothetical protein SELMODRAFT_98495 [Selaginella moellendorffii]
gi|300159280|gb|EFJ25900.1| hypothetical protein SELMODRAFT_98495 [Selaginella moellendorffii]
Length = 850
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 190/455 (41%), Positives = 278/455 (61%), Gaps = 21/455 (4%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
L +L +E ++ IC + +DGAILVFL GW+DI+K D+L NP R+ +++PLH
Sbjct: 337 LTELFEVEAAIQHICEEKDDGAILVFLTGWDDISKLLDKLKLNPSVRNE---LLLPLHGS 393
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P++ Q+++F+RPPPG RKI+L+TNIAET+ITIDDVVYVID G+ KE SYD N ++ L
Sbjct: 394 MPTINQRQIFQRPPPGVRKIVLATNIAETSITIDDVVYVIDCGKAKETSYDALNKLACLL 453
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
SW+S+A+A QR GRAGR Q GIC+HLY +L ++ +Q+PEI R P+E LCLQ+K L
Sbjct: 454 PSWISRAAAHQRRGRAGRVQPGICFHLYPKLMYDAMAQYQLPEILRTPLESLCLQIKSLQ 513
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
+I FL K L+PP + NAI L+ IGAL E++T LG L L + P + KML
Sbjct: 514 VG-SIAKFLSKALEPPELRAVDNAIESLKTIGALDDREELTSLGRHLTTLPLDPKVGKML 572
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
+ CLDPALT+A A +RDPF +PI +++ A AK LA +SD LA++ A
Sbjct: 573 LMGAIFQCLDPALTIAAALAHRDPFVIPI--DKRDAADEAKRRLAG--NARSDHLALMRA 628
Query: 842 FECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARV 901
+E + AK+ G+E +C + F+S+ + + G R+Q L K GF+ +S ++ A
Sbjct: 629 YEGYIVAKRHGRERNYCWENFLSAQTLQWMDGAREQFYDHLSKIGFVDNSSNSANYAAYN 688
Query: 902 PG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLS-FKKT 955
++ AVL AGLYP V + + + F + G KV HP S+N ++ F +
Sbjct: 689 KHSDDLEMVRAVLCAGLYPNVVQCKARGRRTAFFTKDDG--KVEPHPASVNSRVGQFAQ- 745
Query: 956 DDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P +VY E + G+++R+ T + LL+
Sbjct: 746 ---PWLVYSEKVK-TTGIYLRDTTNISDYALLMFG 776
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 148/210 (70%), Gaps = 16/210 (7%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP KD I V NQV+++SGETGCGKTTQ+PQF+LE + +G C I+CTQ
Sbjct: 113 RKKLPAFKMKDEILQAVSQNQVLVVSGETGCGKTTQLPQFILEEEINAGRGAACDIICTQ 172
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRISA SVA R++ ERG+ +G+++GY+IRLE++ + + ++FCT GVLLR LV +
Sbjct: 173 PRRISAISVATRVADERGDELGESVGYQIRLEARRSQETRLLFCTTGVLLRRLVQDPL-- 230
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
+ ++H+IVDEIHER DF+L ++RD+LP P LRLILMSAT++AD
Sbjct: 231 ------------LEGVSHVIVDEIHERGMNEDFLLVVLRDLLPKRPKLRLILMSATINAD 278
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
FS+YFG P + +PGFT+PV+ F+LEDV+
Sbjct: 279 MFSKYFGNAPKLHIPGFTFPVREFFLEDVV 308
>gi|157104526|ref|XP_001648449.1| ATP-dependent RNA helicase [Aedes aegypti]
gi|108880313|gb|EAT44538.1| AAEL004117-PA, partial [Aedes aegypti]
Length = 1006
Score = 342 bits (877), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 209/605 (34%), Positives = 332/605 (54%), Gaps = 51/605 (8%)
Query: 526 MKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP 585
+ + LLD Y +TVN E ID LI +++ IC GAILVFLPG++DI + + L N
Sbjct: 233 LAKVLLDVYHSTVNDEKIDHRLILDIIKYICTKLAPGAILVFLPGYDDILEQYETL--NC 290
Query: 586 FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
T+ F I LHS + + Q VFK PP RKIILSTNIAET+ITIDDVVYVIDSG+
Sbjct: 291 GLSATTNFRIYMLHSNMQTNDQNAVFKPVPPNTRKIILSTNIAETSITIDDVVYVIDSGK 350
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEI 705
+K+K YD + ++L ++W+S+A A QRAGRAGR + G+C+ L+++ R ++ F +PEI
Sbjct: 351 VKQKHYDSVTSTTSLTATWISQACATQRAGRAGRTKPGVCFRLFTRQRFDAMDKFTLPEI 410
Query: 706 KRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELG 765
R+P+ E+CLQ ++ + +I +FL K + PP +++I+ +I +LQ +GAL DE +TELG
Sbjct: 411 LRVPLTEICLQTSIIASHTSILNFLSKAIQPPSTMSIKQSIKLLQKLGALDDDENLTELG 470
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
L L V + K+L + I + C+DP LT+ A DPF LP + +K +A K ++
Sbjct: 471 LILADLPVDARLGKILLYGIFLKCIDPVLTIVSALSVNDPFVLPTTALDKDKAAKLKRDM 530
Query: 826 ASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
A SD L ++ AF+ W K +E FC+++F++SG M+ + +R ++ L
Sbjct: 531 AE--DSYSDCLCLLRAFQKWNELKPSMKERQFCNRFFLNSGTMDTIGSLRSKILGHLRSV 588
Query: 886 GFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRL 941
G + ++ + NA ++ A L+AGLYP + R+ + ++T K+
Sbjct: 589 GLVKSYGAGNIQDLNQNADNWAVVKACLVAGLYPNICRVDKENAT----IKTRIDKKISP 644
Query: 942 HPHSLNFKLSFKKTDDCPL------MVYDEITRGDGGMH--VRNCTVVGPLPLLLLATEI 993
HP S+ S KK + L +V++E TR G+H ++ TVV P+ + L +
Sbjct: 645 HPSSVIRDKSLKKNKESILSLPSEWIVFEEKTR--AGIHCLIKCNTVVAPVTIALFCGPL 702
Query: 994 AVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDR 1053
+ ++E+ +S + DE+ SD D ++ DK+ ++VD
Sbjct: 703 FL--------NEEEALISWRELDESNSDYDEHDMSDKSK----------------LIVDD 738
Query: 1054 WLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD-----G 1108
W+ F + A ++ R +LS L ++HP+ P + + + L D G
Sbjct: 739 WINFAVDSYFGASVFEFRNKLSALFLKFISHPRSYQPSTNDLYLLNTVAQLLKDEDRHLG 798
Query: 1109 FSGIS 1113
F+G S
Sbjct: 799 FAGHS 803
Score = 236 bits (602), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 161/213 (75%), Gaps = 11/213 (5%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIV 239
QI++ER +LPI+ ++D I + + NQV++ISG TG GKTTQ+PQF+LE +GE C+I+
Sbjct: 12 QIIQERLRLPIAPYRDAIMNCLAQNQVMIISGSTGSGKTTQIPQFILESATQQGEACRII 71
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR+SA +VA+R+S ER E +G IGY+IRLES+ +++VFCTNGVLLR L+ +
Sbjct: 72 CTQPRRLSAITVADRVSYERNEQLGQTIGYQIRLESRLSPITNLVFCTNGVLLRCLMGKN 131
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+ + ++ +THIIVDE+HERD+YSDF+L +++ + + ++++ILMSAT+
Sbjct: 132 STSI-----------LNDVTHIIVDEVHERDQYSDFLLISLKEKVLQHTNIKIILMSATI 180
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+++ FS+YF CP+I++PG +P++S++LEDVL
Sbjct: 181 ESNTFSRYFNNCPLIEIPGRLFPIESYFLEDVL 213
>gi|224138290|ref|XP_002322777.1| predicted protein [Populus trichocarpa]
gi|222867407|gb|EEF04538.1| predicted protein [Populus trichocarpa]
Length = 1022
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 189/456 (41%), Positives = 270/456 (59%), Gaps = 13/456 (2%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+E + IC +GA+LVFL GW++I+K +++ N D SKF+++PLH +
Sbjct: 509 LDLGLVEATIEYICRHEREGAVLVFLTGWDEISKLLEQIKGNKLLGDQSKFLVLPLHGSM 568
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P++ Q+++F RPPP RKI+L+TNIAE++ITIDDVVYV+D G+ KE SYD N ++ L
Sbjct: 569 PTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLP 628
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SWVSKASA QR GRAGR Q G+CY LY ++ S+ +Q+PEI R P++ELCL +K L
Sbjct: 629 SWVSKASAHQRRGRAGRLQPGVCYRLYPKIIHDSMLQYQLPEILRTPLQELCLHIKSLQL 688
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ FL K L PP + + NAI +L+ IGAL E++T LG L L V P + K+L
Sbjct: 689 GA-VGSFLSKALQPPDPLAVENAIELLKTIGALDDKEELTPLGRHLCNLPVDPNIGKLLL 747
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ CL PALT+A A +RDPF LPI + K+ A AAK A SD +A++ AF
Sbjct: 748 MGCVFQCLSPALTIAAALAHRDPFVLPI--DRKREADAAKRSFAG--DSCSDHIALVKAF 803
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED--VSSCSHNAR 900
E +K AK+ E FC +YF+S + M+ MR Q L GF+ + VS+ + +
Sbjct: 804 EGYKEAKRNRNERAFCWEYFLSPVTLRMMEDMRDQFLNLLSDIGFVNKSRGVSAYNQYSH 863
Query: 901 VPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
++ A+L AGLYP V + + K F + G KV +HP S+N + P
Sbjct: 864 DMEMVSAILCAGLYPNVVQCKRRGKRTAFFTKEVG--KVDIHPASVNAGVHLFP---LPY 918
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVA 996
MVY E + ++VR+ T + LLL + +
Sbjct: 919 MVYSERVK-TTSIYVRDSTNISDYALLLFGGNLVAS 953
Score = 220 bits (560), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 162/251 (64%), Gaps = 17/251 (6%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+K + +++++ +++ ++++++ R KLP + V NQV++ISGETGCG
Sbjct: 194 AKEKQSIELKQKQDKLKASSSVKEMQSFREKLPAFKMRTEFLKAVAENQVLVISGETGCG 253
Query: 217 KTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
KTTQ+PQ++LE S +G IVCTQPRRISA SVA RI+ ERGE++G+ +GY+IRLE
Sbjct: 254 KTTQLPQYILEEGISSLRGAHYNIVCTQPRRISAISVAARIASERGESLGETVGYQIRLE 313
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+ + ++FCT GVLLR LV +++ ++H+ VDEIHER D
Sbjct: 314 ALRSAQTRLLFCTTGVLLRKLVQD--------------PNLTGVSHLAVDEIHERGMNED 359
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
F+L I+RD+LP P +RLILMSAT++AD FS+YF P I +PG T+PV FYLEDVL
Sbjct: 360 FLLIILRDLLPRRPDMRLILMSATINADLFSKYFRNAPTIHIPGLTFPVSEFYLEDVLEK 419
Query: 395 LKSAESNHLDS 405
+ E LDS
Sbjct: 420 TR-YEIQELDS 429
>gi|62321269|dbj|BAD94478.1| ATP-dependent RNA helicase A like protein [Arabidopsis thaliana]
Length = 581
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/455 (41%), Positives = 275/455 (60%), Gaps = 18/455 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
ID+ L+E + IC GAILVFL GW++I+K +++ N F D+SKF+++PLH +
Sbjct: 71 IDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSM 130
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q+++F RPPP RKI+L+TNIA+++ITIDDVVYV+D G+ KE SYD N V+ L
Sbjct: 131 PTVNQREIFDRPPPNKRKIVLATNIAKSSITIDDVVYVVDCGKAKETSYDALNKVACLLP 190
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR QAG+CY LY ++ + P +Q+PEI R P++ELCL +K L
Sbjct: 191 SWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQV 250
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+I FL K L PP ++ + NAI +L+ IGAL+ E++T LG L L V P + KML
Sbjct: 251 G-SIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLL 309
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ C++PALT+A A YR PF LP+ N K+ A AK A SD +A++ A+
Sbjct: 310 IGAIFQCVNPALTIAAALAYRSPFVLPL--NRKEEADEAKRYFAG--DSCSDHIALLKAY 365
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHN 898
E +++AK+ G E FC Q F+S + M+ MR Q L GF+ P + S++
Sbjct: 366 EGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYD 425
Query: 899 ARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC 958
+I AVL AGLYP V + + K + + G KV +HP S+N +++
Sbjct: 426 ME---MISAVLCAGLYPNVVQCKRRGKRTAFYTKELG--KVDIHPGSVNARVNLF---SL 477
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
P +VY E + +++R+ T + LL+ +
Sbjct: 478 PYLVYSEKVK-TTSVYIRDSTNISDYALLMFGGNL 511
>gi|390349687|ref|XP_784575.3| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Strongylocentrotus purpuratus]
Length = 1040
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/520 (37%), Positives = 309/520 (59%), Gaps = 39/520 (7%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQ 550
K K R EQ+++ + + ++ A+ ++ +Q++D L++++ ++DL L +
Sbjct: 387 KGKRNREEEMEKEQQDRKKFNEYLQ-----AMRETYSEQVVDT-LSSMDHNVLDLDLTAE 440
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
LLR I + +GAILVFLPGW+ I+K D+L + F + +F+IIPLHSM+P++ Q++V
Sbjct: 441 LLRYISLQKPEGAILVFLPGWDQISKLHDKLTSQTLFSE-ERFIIIPLHSMMPTINQRQV 499
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
F+ PPPG RKII++TNIAET+ITIDDVVYV++ GR+KE ++D NN+ T+++ WVSKASA
Sbjct: 500 FEHPPPGVRKIIIATNIAETSITIDDVVYVVNLGRVKETNFDVANNIRTMKAEWVSKASA 559
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFL 730
QR GRAGR Q G C+H+YSQLRA+ L ++Q+PEIKR P+EELCL +K L ++ F+
Sbjct: 560 HQRRGRAGRVQDGECFHVYSQLRASELVEYQLPEIKRTPLEELCLNIKTLKLG-SVHPFI 618
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K ++ P I AI L+ + A +E +T LG L L V P + KM+ F + CL
Sbjct: 619 SKAMETPDIRAIELAISSLKQMRAFDDNEDLTALGYHLSRLPVEPRIGKMMLFGAMFCCL 678
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+A + ++DPF +P+ ++K A + L++ +SD L + A W++AK+
Sbjct: 679 DPILTIAASLSWKDPFYIPLG--KEKLADERRRVLSN--NTRSDHLMLANAMSGWEDAKE 734
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIH 906
E +C Q F+SS ++ ML M+ Q L + F+ P+ + + + N+ ++
Sbjct: 735 HRGEGSYCWQNFMSSNILGMLSKMKGQFCDVLHRLRFVSDRSPKHIDA-NRNSENEQLLK 793
Query: 907 AVLMAGLYPMVARL------------RPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
AVL AGLYP VA + RPP + T +V++HP S+N + +
Sbjct: 794 AVLCAGLYPKVAHVDKVPFNRKTGQNRPPR------LSTPEDGRVQIHPKSVN---ANET 844
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
T ++Y + + + + T+V P PL+ +I+
Sbjct: 845 TFSSKWLLY-HLKLKSTSVFLHDTTMVEPYPLIFCGGKIS 883
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 159/236 (67%), Gaps = 20/236 (8%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
E LT + E +++ R KLP + KD + S + SNQVV+ISGETGCGKTTQVPQF+
Sbjct: 147 EELTKK-ENSEQYQKMQTFRRKLPSFAMKDELLSLIRSNQVVVISGETGCGKTTQVPQFI 205
Query: 226 LEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIG--DNIGYKIRLESKGGK-H 280
L+ S+G+ TC++VCTQPRRISA +VAER++ ER E G +++GY+IRLE+ +
Sbjct: 206 LDDYISRGQGSTCRVVCTQPRRISAITVAERVAAERAERCGHENSVGYQIRLENTFPRAQ 265
Query: 281 SSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII 340
I++CT G+LL+ L + +++++H+++DE+HERD SDF+L I+
Sbjct: 266 GCILYCTTGILLKWLEGDKL--------------LNSVSHVVLDEVHERDLLSDFLLIIL 311
Query: 341 RDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+D+LP L+LILMSATL A+ FS YFG P + +PGFT+ V FYLED+L + +
Sbjct: 312 KDLLPKRRDLKLILMSATLRAELFSDYFGQAPTVNIPGFTFGVTEFYLEDILELTR 367
>gi|222612987|gb|EEE51119.1| hypothetical protein OsJ_31861 [Oryza sativa Japonica Group]
Length = 1074
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 188/469 (40%), Positives = 277/469 (59%), Gaps = 17/469 (3%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF 587
+Q L+ + AT ++L L+E + IC +GAILVFL GW++I+K D++ N
Sbjct: 550 RQSLEAWSATE----LNLSLVEGTIEYICRHEGEGAILVFLTGWDEISKLLDKIKGNNLL 605
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
++++F++IPLH +P+V Q+++F RPP RKI+L+TNIAE++ITIDDVVYVID G+ K
Sbjct: 606 GNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKIVLATNIAESSITIDDVVYVIDCGKAK 665
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKR 707
E SYD N ++ L SW+SKASA QR GRAGR Q G CY LY ++ ++P FQ+PEI R
Sbjct: 666 ETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGACYRLYPKVIYDAMPQFQLPEILR 725
Query: 708 IPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
P++ELCL +K L + FL K L PP +++ NAI +L+ +GAL E++T LG
Sbjct: 726 TPLQELCLTIKSLQLGA-VASFLAKALQPPDPLSVNNAIELLKTVGALDDVEELTSLGRH 784
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L + P + KML + CLDPALT+A A YR+PF LPI E+ A F S
Sbjct: 785 LCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVLPIDRKEEADAVKRSFAGDS 844
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
SD +A++ AFE WK A++ G+E FC + F+S + M+ MR Q L GF
Sbjct: 845 C----SDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMDDMRNQFFDLLSDIGF 900
Query: 888 IPED--VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
+ + + + ++ + ++ AVL AGLYP V + + K + + G KV +HP S
Sbjct: 901 VSKTRGLKAYNYYGKDLEMVCAVLCAGLYPNVVQCKRRGKRTAFYTKDVG--KVDIHPSS 958
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
+N + P +VY E + ++VR+ T + LLL ++
Sbjct: 959 VNAGI---HQFPLPYLVYSEKVK-TASIYVRDSTNISDYALLLFGGSLS 1003
Score = 229 bits (583), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 147/216 (68%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETC 236
R + R KLP ++ V +NQV++ISGETGCGKTTQ+PQF+LE +G C
Sbjct: 297 RSMQSFRDKLPAFKMREEFLKAVAANQVLVISGETGCGKTTQLPQFILEEEIDNLRGADC 356
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SVA RI+ ERGE +GD +GY+IRLESK + ++FCT GVLLR LV
Sbjct: 357 SIICTQPRRISAISVAARIASERGEELGDTVGYQIRLESKRSAQTRLLFCTTGVLLRRLV 416
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
+ D+ ++H++VDEIHER DF++ I+RD+LP P LRL+LMS
Sbjct: 417 QE--------------PDLVGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLVLMS 462
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
AT++A+ FS+YFG P++ +PGFT+PV +LED+L
Sbjct: 463 ATINAELFSKYFGEAPIMHIPGFTFPVTELFLEDIL 498
>gi|218184724|gb|EEC67151.1| hypothetical protein OsI_33998 [Oryza sativa Indica Group]
Length = 1006
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 188/469 (40%), Positives = 277/469 (59%), Gaps = 17/469 (3%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF 587
+Q L+ + AT ++L L+E + IC +GAILVFL GW++I+K D++ N
Sbjct: 482 RQSLEAWSATE----LNLSLVEGTIEYICRHEGEGAILVFLTGWDEISKLLDKIKGNNLL 537
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
++++F++IPLH +P+V Q+++F RPP RKI+L+TNIAE++ITIDDVVYVID G+ K
Sbjct: 538 GNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKIVLATNIAESSITIDDVVYVIDCGKAK 597
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKR 707
E SYD N ++ L SW+SKASA QR GRAGR Q G CY LY ++ ++P FQ+PEI R
Sbjct: 598 ETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGACYRLYPKVIYDAMPQFQLPEILR 657
Query: 708 IPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
P++ELCL +K L + FL K L PP +++ NAI +L+ +GAL E++T LG
Sbjct: 658 TPLQELCLTIKSLQLGA-VASFLAKALQPPDPLSVNNAIELLKTVGALDDVEELTSLGRH 716
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L + P + KML + CLDPALT+A A YR+PF LPI E+ A F S
Sbjct: 717 LCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVLPIDRKEEADAVKRSFAGDS 776
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
SD +A++ AFE WK A++ G+E FC + F+S + M+ MR Q L GF
Sbjct: 777 C----SDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMDDMRNQFFDLLSDIGF 832
Query: 888 IPED--VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
+ + + + ++ + ++ AVL AGLYP V + + K + + G KV +HP S
Sbjct: 833 VSKTRGLKAYNYYGKDLEMVCAVLCAGLYPNVVQCKRRGKRTAFYTKDVG--KVDIHPSS 890
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
+N + P +VY E + ++VR+ T + LLL ++
Sbjct: 891 VNAGI---HQFPLPYLVYSEKVK-TASIYVRDSTNISDYALLLFGGSLS 935
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 83/119 (69%), Gaps = 2/119 (1%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETC 236
R + R KLP ++ V +NQV++ISGETGCGKTTQ+PQF+LE +G C
Sbjct: 297 RSMQSFRDKLPAFKMREEFLKAVAANQVLVISGETGCGKTTQLPQFILEEEIDNLRGADC 356
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVA R++ ERGE +GD +GY+IRLESK + ++FCT GVLLR L
Sbjct: 357 SIICTQPRRISAISVAARVASERGEELGDTVGYQIRLESKRSAQTRLLFCTTGVLLRRL 415
>gi|10440614|gb|AAG16852.1|AC069145_1 putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
Length = 869
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/478 (39%), Positives = 279/478 (58%), Gaps = 14/478 (2%)
Query: 520 NALSDSMKQQLLDKYLATVNPELI-DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTR 578
N+ D+ + K LA+V + I D +E + IC +GAILVFL GW++I+K
Sbjct: 332 NSERDNFQGNSRRKRLASVKSDPISDAFEVEGTIEYICRHEGEGAILVFLTGWDEISKLL 391
Query: 579 DRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
D++ N ++++F++IPLH +P+V Q+++F RPP RKI+L+TNIAE++ITIDDVV
Sbjct: 392 DKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKIVLATNIAESSITIDDVV 451
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLP 698
YVID G+ KE SYD N ++ L SW+SKASA QR GRAGR Q G CY LY ++ ++P
Sbjct: 452 YVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGACYRLYPKVIYDAMP 511
Query: 699 DFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
FQ+PEI R P++ELCL +K L + FL K L PP +++ NAI +L+ +GAL
Sbjct: 512 QFQLPEILRTPLQELCLTIKSLQLGA-VASFLAKALQPPDPLSVNNAIELLKTVGALDDV 570
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
E++T LG L L + P + KML + CLDPALT+A A YR+PF LPI E+ A
Sbjct: 571 EELTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVLPIDRKEEADA 630
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
F S SD +A++ AFE WK A++ G+E FC + F+S + M+ MR Q
Sbjct: 631 VKRSFAGDSC----SDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMDDMRNQF 686
Query: 879 QTELIKNGFIPED--VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGG 936
L GF+ + + + ++ + ++ AVL AGLYP V + + K + + G
Sbjct: 687 FDLLSDIGFVSKTRGLKAYNYYGKDLEMVCAVLCAGLYPNVVQCKRRGKRTAFYTKDVG- 745
Query: 937 AKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
KV +HP S+N + P +VY E + ++VR+ T + LLL ++
Sbjct: 746 -KVDIHPSSVNAGI---HQFPLPYLVYSEKVK-TASIYVRDSTNISDYALLLFGGSLS 798
Score = 226 bits (575), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 146/216 (67%), Gaps = 18/216 (8%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETC 236
R + R KLP ++ V +NQV++ISGETGCGKTTQ+PQF+LE +G C
Sbjct: 125 RSMQSFRDKLPAFKMREEFLKAVAANQVLVISGETGCGKTTQLPQFILEEEIDNLRGADC 184
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SVA RI+ ERGE +GD +GY+IRLESK + ++FCT GVLLR L
Sbjct: 185 SIICTQPRRISAISVAARIASERGEELGDTVGYQIRLESKRSAQTRLLFCTTGVLLRRL- 243
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
+ D+ ++H++VDEIHER DF++ I+RD+LP P LRL+LMS
Sbjct: 244 ---------------EPDLVGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLVLMS 288
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
AT++A+ FS+YFG P++ +PGFT+PV +LED+L
Sbjct: 289 ATINAELFSKYFGEAPIMHIPGFTFPVTELFLEDIL 324
>gi|390331935|ref|XP_001199419.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Strongylocentrotus purpuratus]
Length = 790
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/517 (37%), Positives = 308/517 (59%), Gaps = 40/517 (7%)
Query: 500 QLGEQENQPEV----AQIIKKHMEN--ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLR 553
++G + N+ E Q KK EN A+ ++ +Q++D L++++ ++DL L +LLR
Sbjct: 135 EIGRKRNREEEMEKEQQDRKKFNENLQAMRETYSEQVVDT-LSSMDHNVLDLDLTAELLR 193
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
I + +GAILVFLPGW+ I+K D+L + F + +F+IIPLHSM+P++ Q++VF+
Sbjct: 194 YISLQKPEGAILVFLPGWDQISKLHDKLTSQTLFSE-ERFIIIPLHSMMPTINQRQVFEH 252
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
P PG RKII++TNIAET+ITIDDVVYV++ GR+KE ++D NN+ T+++ WVSKASA QR
Sbjct: 253 PLPGVRKIIIATNIAETSITIDDVVYVVNLGRVKETNFDVANNIRTMKAEWVSKASAHQR 312
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGR Q G C+H+YSQL+A+ + ++Q+PEIKR P+EELCL +K L ++ F+ K
Sbjct: 313 RGRAGRVQDGECFHVYSQLKASEMVEYQLPEIKRTPLEELCLNIKTLKLG-SVHPFISKA 371
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
++ P I AI L+ + A +E +T LG L L V P + KM+ F + CLDP
Sbjct: 372 METPDIRAIELAISSLKQMRAFDDNEDLTALGYHLSRLPVEPRIGKMMLFGAMFCCLDPI 431
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LT+A + ++DPF +P+ ++K A + L++ +SD L + A W++AK+
Sbjct: 432 LTIAASLSWKDPFYIPLG--KEKLADERRRVLSN--NTRSDHLMLANAMSGWEDAKEHRG 487
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVL 909
E +C Q F+SS ++ ML M+ Q L + F+ P+ + + + N+ ++ AVL
Sbjct: 488 EGSYCWQNFMSSNILGMLSKMKGQFCDVLHRLRFVSDRSPKHIDA-NRNSENEQLLKAVL 546
Query: 910 MAGLYPMVARL------------RPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDD 957
AGLYP VA + RPP + T +V++HP S+N + + T
Sbjct: 547 CAGLYPKVAHVDKVPFNRKTGQNRPPR------LSTPEDGRVQIHPKSVN---ANETTFS 597
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
++Y + + + + T+V P PL+ +I+
Sbjct: 598 SKWLLY-HLKLKSTSVFLHDTTMVEPYPLIFCGGKIS 633
>gi|255566157|ref|XP_002524066.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223536634|gb|EEF38276.1| ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 994
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/450 (41%), Positives = 266/450 (59%), Gaps = 13/450 (2%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+E + IC GAILVFL GW++I+K DR+ N D SKF+++PLH +
Sbjct: 481 LDLGLVEATIEYICRHEGGGAILVFLTGWDEISKLLDRVKGNKLLGDQSKFLVLPLHGSM 540
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P++ Q+++F RPPP RKI+L+TNIAE++ITIDDVVYV+D G+ KE SYD N ++ L
Sbjct: 541 PTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLP 600
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR Q G+CY LY ++ ++ +Q+PEI R P++ELCL +K L
Sbjct: 601 SWISKASAHQRRGRAGRVQPGVCYRLYPKIIHDAMLQYQLPEILRTPLQELCLHIKSLQL 660
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ FL K L PP ++++NAI +L+ IGAL +E++T LG L L + P + KML
Sbjct: 661 GA-VGSFLAKALQPPDPLSVQNAIELLKTIGALDDNEELTPLGRHLCTLPLDPNIGKMLL 719
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ CL+PALT+A A +RDPF LPI K A AAK A SD +A++ AF
Sbjct: 720 MGCVFQCLNPALTIASALAHRDPFVLPIE--MKNEADAAKQSFAG--DSCSDHIALVKAF 775
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP 902
E + AK E FC + F+S + M+ MR+Q L GF+ + + ++N
Sbjct: 776 EGYMEAKCNRNERAFCWENFLSPITLRMMEDMREQFLNLLSDIGFVDKSKGASAYNQYSH 835
Query: 903 GI--IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
+ + A+L AGLYP V + + K + + G KV LHP S+N + P
Sbjct: 836 DLEMVSAILCAGLYPNVVQCKRRGKRTAFYTKEVG--KVDLHPASVNAGIHLFP---LPY 890
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
MVY E + G+ VR+ T + LLL
Sbjct: 891 MVYSEKVK-TTGIFVRDSTNISDYALLLFG 919
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 159/238 (66%), Gaps = 16/238 (6%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+K +++++++ + +L+++ R KLP K V NQV++ISGETGCG
Sbjct: 193 AKEKLSLELKQRRDKTMASDSLKEMQSFREKLPAFKMKGEFLKAVAENQVLVISGETGCG 252
Query: 217 KTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
KTTQ+PQ++LE ++ G C I+CTQPRRISA SVA RIS ERGEN+G+ +GY+IRLE
Sbjct: 253 KTTQLPQYILEEEITRLRGADCNIICTQPRRISAISVAARISSERGENLGETVGYQIRLE 312
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+K + ++FCT GVLLR LV D++ ++H++VDEIHER D
Sbjct: 313 AKRSAQTHLLFCTTGVLLRQLVQD--------------PDLTGVSHLLVDEIHERGMNED 358
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
F+L I+RD+LP P LRLILMSAT++AD FS+YFG P + +PG T+PV F+LED+L
Sbjct: 359 FLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTMHIPGLTFPVTEFFLEDIL 416
>gi|359481069|ref|XP_002264021.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
vinifera]
Length = 991
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/453 (41%), Positives = 268/453 (59%), Gaps = 13/453 (2%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+E + IC +GAILVFL GW+DI+ D++ N F D K +++PLH +
Sbjct: 480 LDLGLVEATIEHICRHEGEGAILVFLTGWDDISNLLDKVKGNNFLGDPRKNLVLPLHGSM 539
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P++ Q+++F RPP RKI+L+TNIAE++ITIDDVVYVID G+ KE SYD N ++ L
Sbjct: 540 PTINQREIFDRPPSNMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLP 599
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA QR GRAGR Q G+CY LY ++ ++ FQ+PEI R P++ELCL +K L
Sbjct: 600 SWISKASAHQRRGRAGRVQPGVCYRLYPKMIHEAMLQFQLPEILRTPLQELCLNIKSLQL 659
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL K L PP ++++NA+ +L+ IGAL E++T LG L L + P + KML
Sbjct: 660 G-KIGSFLSKALQPPDPLSVQNAVELLKTIGALDDMEELTPLGRHLCKLPLDPNIGKMLL 718
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ CL+PALT+A A +RDPF LPI N K+ A AAK A SD +A++ AF
Sbjct: 719 MGSIFQCLNPALTIAAALAHRDPFVLPI--NRKEEANAAKRSFAG--DSCSDHIALLNAF 774
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP 902
E WK+AK G+E FC + F+S + M+ MR Q L GF+ + + ++N
Sbjct: 775 EGWKDAKCSGKERDFCWENFLSPITLQMMDDMRNQFLDLLSDIGFVDKSKGAIAYNQYSN 834
Query: 903 GI--IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
+ + A+L AGLYP V + + K + + G KV +HP S+N + P
Sbjct: 835 DLEMVCAILCAGLYPNVLQCKRRGKRTAFYTKEVG--KVDIHPASVNAGVHLFP---LPY 889
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
MVY E + + VR+ T + LLL +
Sbjct: 890 MVYSEKVK-TASIFVRDSTNISDYSLLLFGGNL 921
Score = 226 bits (575), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 158/246 (64%), Gaps = 23/246 (9%)
Query: 156 MSKAEIAMKVESLTSRIEKDA-------NLRQIVEERSKLPISSFKDVITSTVDSNQVVL 208
+SK EI E L+ ++++ +++ + R KLP K V NQV++
Sbjct: 185 VSKLEIDTAKEGLSVELKQNHEKMKGSNSVKMMQAFREKLPAFKMKSEFLKAVADNQVLV 244
Query: 209 ISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDN 266
+SGET CGKTTQ+PQF+LE S +G C I+CTQPRRISA SVA RIS E+GE++G+
Sbjct: 245 VSGETSCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVAARISSEKGESLGET 304
Query: 267 IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEI 326
+GY+IRLE+K + ++FCT GVLLR LV D++ ++H++VDEI
Sbjct: 305 VGYQIRLEAKRSAQTRLLFCTTGVLLRQLVQD--------------PDLTGVSHLLVDEI 350
Query: 327 HERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSF 386
HER DF+L I+ D+LP P LRLILMSAT++AD FS+YFG P I +PGFT+PV
Sbjct: 351 HERGMNEDFLLIILHDLLPRRPDLRLILMSATINADLFSKYFGNAPTIHIPGFTFPVAEL 410
Query: 387 YLEDVL 392
+LED+L
Sbjct: 411 FLEDLL 416
>gi|328909477|gb|AEB61406.1| putative ATP-dependent RNA helicase DHX36-like protein, partial
[Equus caballus]
Length = 343
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 235/347 (67%), Gaps = 8/347 (2%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I + EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 3 VDLNLIAALIRYIVLKEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 61
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D NN+ST+ +
Sbjct: 62 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSA 121
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 122 EWVSKANAKQRRGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 181
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 182 G-GIACFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 240
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 241 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTKSDHLTVVNAF 296
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF
Sbjct: 297 EGWEEARRRGFRHEKDYCWEYFLSSNTLQMLHNMKGQFAKHLLGAGF 343
>gi|167526002|ref|XP_001747335.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774170|gb|EDQ87802.1| predicted protein [Monosiga brevicollis MX1]
Length = 1060
Score = 336 bits (862), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 188/479 (39%), Positives = 280/479 (58%), Gaps = 27/479 (5%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
+ID L+ ++ IC + DGAIL F+PGW DI K + L ++ + K+ ++PLHSM
Sbjct: 520 MIDYDLVTAVIWHICRNKPDGAILCFMPGWTDIQKVYETLKSSGPTANRQKYRVLPLHSM 579
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P+ QQ+++F RPP G RKI+++TNIAET+ITIDDVVYVID+G KEK+YD +++S L+
Sbjct: 580 LPTAQQQQIFDRPPAGVRKIVIATNIAETSITIDDVVYVIDTGLGKEKTYDEVSHLSELK 639
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
++WVSKAS++QR GRAGR Q G+CYHL+++ R A + D Q+PE+ R P+EEL LQ+K+L
Sbjct: 640 ATWVSKASSRQRKGRAGRVQDGVCYHLFTRFRLAQMEDNQLPELLRTPLEELILQIKILK 699
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
DFLQ+ +D P + NA+ L+ + AL +E + LG L L V P + +ML
Sbjct: 700 LG-QASDFLQRAIDQPSPQAVENALKALRQLHALDKEENLLPLGHHLAQLPVAPKIGRML 758
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISP----NEKKRATAAKFELASLYGGQSDQLA 837
FA ++ CL P +A + ++DPF+ PI ++++RA A + SD +
Sbjct: 759 VFAAMLQCLKPISVIAASLSFKDPFSAPIDKQKVMDQRRRAMAPE--------AMSDHIT 810
Query: 838 VIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSH 897
++ A++ W+ + G +C F+SS +NM+ M QL L GFI +V H
Sbjct: 811 LLRAYQGWEEELRHGGAREYCWDNFLSSSTLNMIRDMAGQLMDLLRDIGFISAEVDFNRH 870
Query: 898 NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE------TAGGAKVRLHPHSLNFKLS 951
A +I AVL AGLYP V ++ PH GR+F E T +V LHP S+ L+
Sbjct: 871 -ADNTQLIKAVLAAGLYPNVISVQHPH--GRKFGERPPKLFTQEDGRVTLHPKSV---LA 924
Query: 952 FKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDM 1010
+ + +VY R + V + T+V PL LL EI+ D E+ + DD
Sbjct: 925 EETVFETKWLVYHLKMR-TTSLFVYDATMVQPLALLFFGGEISTG-MEDGEEIIQVDDF 981
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 161/247 (65%), Gaps = 23/247 (9%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+++A + E+ ++ + D++L R KLP + + + S+QVV+++GETGC
Sbjct: 195 LTEASLVQDREAKRAKEQSDSSLAAF---RQKLPAWKQQADVIDAIRSHQVVIVTGETGC 251
Query: 216 GKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIG---YK 270
GKTTQVPQF+L+ +GE ++VCTQPRRISATSVA+R++ ER E+ G + Y+
Sbjct: 252 GKTTQVPQFVLDDALDRGEGMNVQMVCTQPRRISATSVAQRVARERNESCGGSSSSTGYQ 311
Query: 271 IRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHER 329
IRL+++ + H SI FCT G+LLR L+ N + D+S HII+DE+HER
Sbjct: 312 IRLDARLPRSHGSITFCTVGILLRRLI-----------NDSSLQDIS---HIILDEVHER 357
Query: 330 DRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
D +DF+L II+D+LP P L++ILMSATL+A+ FS YF G + +PGFTYPV+ YL
Sbjct: 358 DILTDFLLVIIKDILPKRPSLKVILMSATLNAETFSSYFPGSTTLHIPGFTYPVEELYLA 417
Query: 390 DVLSILK 396
DVL ++
Sbjct: 418 DVLDEIR 424
>gi|255073633|ref|XP_002500491.1| predicted protein [Micromonas sp. RCC299]
gi|226515754|gb|ACO61749.1| predicted protein [Micromonas sp. RCC299]
Length = 1024
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 187/450 (41%), Positives = 269/450 (59%), Gaps = 25/450 (5%)
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
DGAILVFL GW++I K D + A+P D +K ++PLH +P+ Q+++F RPP G RK
Sbjct: 425 DGAILVFLTGWDEITKVNDLMRADPLLGDRTKCAVLPLHGAMPTANQREIFDRPPRGVRK 484
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
IILSTNIAET+ITIDDV +V+D G+ KEK+YD NN++ LQ +W+SKASA QR GRAGR
Sbjct: 485 IILSTNIAETSITIDDVTHVVDCGKSKEKTYDALNNLACLQPAWISKASAHQRRGRAGRV 544
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSV 740
+ G+CY LY++ + A + D PE+ R P+EELCL +K L E F+ + L PP
Sbjct: 545 REGVCYRLYTKAQHAKMADHATPELLRTPLEELCLTIKSLGLGL-CEPFIARALQPPEPK 603
Query: 741 TIRNAIIVLQDIGALS-LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++ NAI +L IGALS E++T LG L L V P + KML A CL PALT+A
Sbjct: 604 SVHNAIELLITIGALSRRTEELTPLGRHLAALPVDPRVGKMLVTAATFGCLSPALTIAAG 663
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG--QEAW- 856
Y+DPF LP+ ++K +A A + LA +SD +A++ AFE W A++ G +E W
Sbjct: 664 MAYKDPFVLPM--DKKHQADAVRRRLAG--DTRSDHIALVRAFEGWTRARRDGGNREGWE 719
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS-----CSHNARVP--GIIHAVL 909
+C + F+S + ++ MR+Q L GF+P+ S +HN ++ AV+
Sbjct: 720 YCRRNFLSGNTLELMSDMRRQFADLLHGIGFLPDGARSADRVDAAHNRHAADVAMLRAVI 779
Query: 910 MAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN--FKLSFKKTDDCPLMVYDEIT 967
AG+YP + +RP + R ++T KV HP S+N F +SF P +VY E
Sbjct: 780 CAGMYPRLVSVRP--RGRRNELKTHEDGKVECHPSSVNSEFGVSFP----FPWLVYCEKV 833
Query: 968 RGDGGMHVRNCTVVGPLPLLLLATEIAVAP 997
+ G+++R+ T V +LLL ++ P
Sbjct: 834 K-TSGVYIRDSTCVPAYAVLLLGGDLDEEP 862
Score = 213 bits (542), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 145/212 (68%), Gaps = 17/212 (8%)
Query: 184 ERSKLPISSFKDVITSTVDS-NQVVLISGETGCGKTTQVPQFLLEHIWSKGET--CKIVC 240
+R++LP +D + + VD+ V+++SGETGCGKTTQ+PQF+LE + G+ I+C
Sbjct: 159 QRARLPAFERRDELLAAVDACTNVLVVSGETGCGKTTQLPQFVLERALASGDASVTGILC 218
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRRISA SVA R++ ERGE +G+++GY+IRLE++ + ++FCT GVLLR L +
Sbjct: 219 TQPRRISAISVAARVAQERGEELGESVGYQIRLEARRSAATRLLFCTTGVLLRRLAVE-- 276
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
P D VS H+ VDEIHER DF+L ++RD+LP P L+++LMSATLD
Sbjct: 277 ---------PTLDSVS---HVFVDEIHERGMNEDFLLVVLRDLLPRRPDLKIVLMSATLD 324
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
A F+ YFGG PV +PGFTY V++ +LED L
Sbjct: 325 AGLFAAYFGGAPVAHIPGFTYNVRTLFLEDAL 356
>gi|326432195|gb|EGD77765.1| hypothetical protein PTSG_08854 [Salpingoeca sp. ATCC 50818]
Length = 1022
Score = 332 bits (852), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 194/512 (37%), Positives = 291/512 (56%), Gaps = 37/512 (7%)
Query: 504 QENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPEL-IDLVL--IEQLLRKICMDSE 560
Q+N E I+ A DS+ Y N ++ IDLV+ IE + DS+
Sbjct: 386 QDNYDEFLHSIQPKYSRATLDSL-------YNFNANDQIDIDLVMGVIEHI------DSQ 432
Query: 561 D-GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
GA+L FLPGW +I+ +L +P F + SK+ ++PLHSM+P +Q+KVF PP G R
Sbjct: 433 AAGAVLCFLPGWGEISDLHKKLTQSPRFGNASKYWVLPLHSMIPPHEQRKVFDNPPAGVR 492
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
KI+LSTNIAET+ITIDDVVYVI++G+ KEKSYD N +S LQ+ W+S+AS +QR GRAGR
Sbjct: 493 KIVLSTNIAETSITIDDVVYVINTGKAKEKSYDATNQISALQAEWISRASCRQRRGRAGR 552
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
Q G+CYHL++ ++ ++QVPEI R +EELCLQ+K+L + FL K LD P
Sbjct: 553 VQEGVCYHLFTCYHHRNMKEYQVPEILRTSLEELCLQIKMLRLGL-VRPFLAKALDAPDD 611
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
T+ A+ +L ++ AL E +T LG L L V+P + +M+ F L +CLDP LT+A +
Sbjct: 612 KTVGQALTLLHNLDALDSKENLTPLGYHLSRLPVNPRIGRMIIFGSLFECLDPVLTIAAS 671
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCS 859
++DPF +PI N + K E A +SD +A + AF W+ A + ++ +C
Sbjct: 672 LSFKDPFVMPI--NRQAEVDRVKKEFAG--DSKSDHIAFLRAFHGWEQAWREHRQREYCW 727
Query: 860 QYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVSSCSHNARVPGIIHAVLMAGLYPM 916
F+S + M+ M+ Q L GF+ E +S C+ N+R ++ AVL AGLYP
Sbjct: 728 DNFLSGSTLKMIRDMKTQFLNLLQDIGFVGRTREAISKCNINSRNEKLVVAVLCAGLYPN 787
Query: 917 VARLRPPHKNGRRF------VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGD 970
VA + H +G+ F ++T V LHP S+ L+ + +VY +
Sbjct: 788 VASVY--HSHGKAFGKRPPKLKTREDGTVALHPKSV---LADETVIPTKWLVYHHKMKT- 841
Query: 971 GGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+++ + +++ P PL+ ++ V +NE
Sbjct: 842 VKIYLYDASMIPPFPLIFFGGDVKVTREGENE 873
Score = 213 bits (542), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 159/246 (64%), Gaps = 22/246 (8%)
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
PK A ++ ++ + K+A+ ++ R +LP + + V NQV++ISGET
Sbjct: 127 PKDEAAAVSKQIAEDHTAKTKNASFERLKPFRERLPSFKMRAEVLRAVRDNQVIVISGET 186
Query: 214 GCGKTTQVPQFLLEHIW---SKGETCKIVCTQPRRISATSVAERISVERGENIGDNI--- 267
GCGKTTQVPQF+L+ W +KG C+IVCTQPRRISATSVAER++ ERGE G +
Sbjct: 187 GCGKTTQVPQFILDD-WIQANKGADCRIVCTQPRRISATSVAERVAAERGERCGGDTSST 245
Query: 268 GYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEI 326
GY IRL+SK + SI FCT G+LLR +VS + + ++H+I+DEI
Sbjct: 246 GYSIRLDSKLPRTRGSITFCTTGILLRRMVSDPM--------------LEGISHVILDEI 291
Query: 327 HERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSF 386
HERD SDF+L I++D+LP+ P LR+ILMSAT++A+ F+ YF ++++PGF Y V+
Sbjct: 292 HERDILSDFLLIILKDLLPNRPDLRVILMSATVNAETFAAYFNNATMLEIPGFAYDVEEI 351
Query: 387 YLEDVL 392
+LED +
Sbjct: 352 FLEDFI 357
>gi|299116605|emb|CBN76232.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1170
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 201/476 (42%), Positives = 289/476 (60%), Gaps = 28/476 (5%)
Query: 528 QQLLDKYLATVNPELIDLVLIEQLLRKICMDS-EDGAILVFLPGWEDINKTRDRLLANPF 586
++LL +Y + E +D L+E LLR IC + EDGA+LVFLPGW+DI + D L +
Sbjct: 633 EELLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGDFLRQSLH 692
Query: 587 FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
F D KF I+PLHS VP+ +Q++VF RPP GCRKI+LSTNIAET+ITIDDV +VIDSGR
Sbjct: 693 FSDERKFQILPLHSGVPTAKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRA 752
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIK 706
KE SYDP+ + TL WVSKASA+QR GRAGR +AG+C+HL+S LR SL + Q E+
Sbjct: 753 KESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSALRHESLREHQESELL 812
Query: 707 RIPIEELCLQVKLL--------DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
R P+EE+ LQ K+L DP+ + FL + +D P +++RNA+ +LQ +GAL
Sbjct: 813 RTPLEEVVLQAKMLGLANGGPGDPD-SAAGFLSQAIDAPAELSLRNAVQLLQSLGALDEG 871
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
E++T+LG +L +S+ P + KM+ ++ L+ C PALT ACA Y+DPF LP++ +++ A
Sbjct: 872 EELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTSACAMTYKDPFVLPMNAAQRRDA 931
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCS---QYFVSSGVMNMLLGMR 875
+AK LA +SD +A++ A E +AK +G S + +S+ + M+ +
Sbjct: 932 KSAKIALAQ--ESESDLIALLTALERHADAKAKGGAGAAASLARKGHLSAPTLGMIWDIC 989
Query: 876 KQLQTELIKNGFIPEDV---SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE 932
Q+ EL +G +P S C+ N+R ++ +VL AGLYP VA RP N +
Sbjct: 990 GQVARELQGSG-LPSAYDWRSPCNSNSRDVSLLSSVLCAGLYPNVAMRRPGATN----FK 1044
Query: 933 TAGGAKVRLHPHSLNFKLSFK-----KTDDCPLMVYDEITRGDGGMHVRNCTVVGP 983
T GG RLH S+N S + + + + E+TR + N + V P
Sbjct: 1045 TLGGHTARLHMSSINAARSQRLGQANSSRQTEFIAFGELTRTAANFVMSNTSPVSP 1100
Score = 256 bits (653), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 212/388 (54%), Gaps = 33/388 (8%)
Query: 23 TVAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQR 81
VAE+TRI + + L F +D F NL N R +HE K++G+TSKS G+G R
Sbjct: 52 AVAESTRIALEKQLHAFRDDEDATQLAFPPNLDNTSRKFIHEAVKRLGLTSKSYGKGDAR 111
Query: 82 RVSVCKSKKRVETDKG-KEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDA------ 134
++V K K D + P L L+ F+ +PP E + A
Sbjct: 112 DITVKKKKNGGGGDGNGAQRPPMLQLGNARDAALKAYFSRHPPSRREADTVMSAAVGGGM 171
Query: 135 -------NQSRKSDKTRGKRVDIFCKPKMSKAEIAMKV---ESLTSRIEKDANLRQIVEE 184
Q R ++ P S E+ + + SR ++ A +++
Sbjct: 172 HAAAELATQKRHKAALLDRQAKAVTSPGASAQELQRRTSMYNAAQSRRQRAAGHQRMSAF 231
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP ++D I + V +Q L+SGETGCGK+TQVPQFLL+ S G CKIVCTQPR
Sbjct: 232 RQGLPAWEYRDTIVNMVRDHQACLVSGETGCGKSTQVPQFLLDDP-SIGPGCKIVCTQPR 290
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
RISA +VAERI+ ERGE IG +GY IRLES K + +V T G+LL+ L + LK
Sbjct: 291 RISAIAVAERIAEERGEKIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPM--LK 348
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
E TH+++DE+HERDR S+F+L ++R +L P LRL+LMSATL ++
Sbjct: 349 E------------FTHVLIDEVHERDRNSEFLLIVLRGLLAKRPDLRLMLMSATLQQGKY 396
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
S+YFGGCP+ + T+PV++F+LEDVL
Sbjct: 397 SEYFGGCPITTIGARTFPVQAFFLEDVL 424
>gi|296089375|emb|CBI39147.3| unnamed protein product [Vitis vinifera]
Length = 1356
Score = 330 bits (845), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/446 (41%), Positives = 263/446 (58%), Gaps = 13/446 (2%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
+E + IC +GAILVFL GW+DI+ D++ N F D K +++PLH +P++
Sbjct: 849 FVEATIEHICRHEGEGAILVFLTGWDDISNLLDKVKGNNFLGDPRKNLVLPLHGSMPTIN 908
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q+++F RPP RKI+L+TNIAE++ITIDDVVYVID G+ KE SYD N ++ L SW+S
Sbjct: 909 QREIFDRPPSNMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWIS 968
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
KASA QR GRAGR Q G+CY LY ++ ++ FQ+PEI R P++ELCL +K L I
Sbjct: 969 KASAHQRRGRAGRVQPGVCYRLYPKMIHEAMLQFQLPEILRTPLQELCLNIKSLQLG-KI 1027
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL K L PP ++++NA+ +L+ IGAL E++T LG L L + P + KML +
Sbjct: 1028 GSFLSKALQPPDPLSVQNAVELLKTIGALDDMEELTPLGRHLCKLPLDPNIGKMLLMGSI 1087
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
CL+PALT+A A +RDPF LPI N K+ A AAK A SD +A++ AFE WK
Sbjct: 1088 FQCLNPALTIAAALAHRDPFVLPI--NRKEEANAAKRSFAG--DSCSDHIALLNAFEGWK 1143
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI-- 904
+AK G+E FC + F+S + M+ MR Q L GF+ + + ++N +
Sbjct: 1144 DAKCSGKERDFCWENFLSPITLQMMDDMRNQFLDLLSDIGFVDKSKGAIAYNQYSNDLEM 1203
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYD 964
+ A+L AGLYP V + + K + + G KV +HP S+N + P MVY
Sbjct: 1204 VCAILCAGLYPNVLQCKRRGKRTAFYTKEVG--KVDIHPASVNAGVHLFPL---PYMVYS 1258
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLA 990
E + + VR+ T + LLL
Sbjct: 1259 EKVK-TASIFVRDSTNISDYSLLLFG 1283
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 158/246 (64%), Gaps = 23/246 (9%)
Query: 156 MSKAEIAMKVESLTSRIEKDA-------NLRQIVEERSKLPISSFKDVITSTVDSNQVVL 208
+SK EI E L+ ++++ +++ + R KLP K V NQV++
Sbjct: 255 VSKLEIDTAKEGLSVELKQNHEKMKGSNSVKMMQAFREKLPAFKMKSEFLKAVADNQVLV 314
Query: 209 ISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDN 266
+SGET CGKTTQ+PQF+LE S +G C I+CTQPRRISA SVA RIS E+GE++G+
Sbjct: 315 VSGETSCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVAARISSEKGESLGET 374
Query: 267 IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEI 326
+GY+IRLE+K + ++FCT GVLLR LV D++ ++H++VDEI
Sbjct: 375 VGYQIRLEAKRSAQTRLLFCTTGVLLRQLVQD--------------PDLTGVSHLLVDEI 420
Query: 327 HERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSF 386
HER DF+L I+ D+LP P LRLILMSAT++AD FS+YFG P I +PGFT+PV
Sbjct: 421 HERGMNEDFLLIILHDLLPRRPDLRLILMSATINADLFSKYFGNAPTIHIPGFTFPVAEL 480
Query: 387 YLEDVL 392
+LED+L
Sbjct: 481 FLEDLL 486
>gi|198431627|ref|XP_002120730.1| PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 36
[Ciona intestinalis]
Length = 983
Score = 329 bits (844), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 183/473 (38%), Positives = 284/473 (60%), Gaps = 22/473 (4%)
Query: 531 LDKYLATVNPELIDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPF 586
LD YL + +D LI ++ I ++ S GA+L+FLPGW DI K ++++N
Sbjct: 455 LDAYLQ----QKLDFDLIIATVKHIILNPAYSSTGGAMLLFLPGWSDI-KQLHQMISNDR 509
Query: 587 FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
F SKF I+PLHSMVPS Q++VF RPP G KI+++TNIAET+ITIDD+V+VID G++
Sbjct: 510 FFQPSKFRILPLHSMVPSSNQQQVFDRPPVGVTKIVIATNIAETSITIDDIVHVIDCGKI 569
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIK 706
K + ++ N+S+L + W+++A+AKQR GRAGR Q G CYHL+S+L+ L D+ VPEI
Sbjct: 570 KIRKFEAGKNISSLNAEWLTRANAKQRKGRAGRVQEGYCYHLFSKLQERKLDDYMVPEIL 629
Query: 707 RIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766
R P+++LCL +K+L+ + DFL + ++PP + ++ +I L + AL +E +T LG
Sbjct: 630 RSPLDQLCLHIKILNLG-KLRDFLSEVIEPPPADSVELSIQKLTAMNALDSNEHLTPLGY 688
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L V P + KML A + CLDP LT+A + ++DPFTLP+ ++ A K EL+
Sbjct: 689 HLARFPVEPQIGKMLILATMFSCLDPVLTIAASLSFKDPFTLPLGKEDE--ANERKQELS 746
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
+ SD L ++ F+ W AK+RG E +C + F+S + ML MR+Q + L + G
Sbjct: 747 N--DANSDHLMLVNMFDGWVAAKRRGAERDYCWRNFLSMSTVKMLSDMREQFKNHLFEAG 804
Query: 887 FIP--EDVSSCSHNARVPGIIHAVLMAGLYPMVARL--RPPHKNGRRFVETAGGAKVRLH 942
F+ D+S + +++ II A++ AGLYP VA+L PH+ + + T KV +H
Sbjct: 805 FLSCQTDLSEANRHSKNIKIIQAIVCAGLYPNVAKLVKMKPHRPPK--ISTKTERKVAIH 862
Query: 943 PHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
P S+N L Y+++ + +++ + + V P PLL +I+
Sbjct: 863 PKSVNCDKPSSNFTHQWLCYYEKMKTAE--VYLYDTSEVSPYPLLFFGGDIST 913
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/222 (47%), Positives = 154/222 (69%), Gaps = 19/222 (8%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCK 237
Q++E R KLP + + + S+QVV++SGETGCGKTTQ+PQF+L+ S G +CK
Sbjct: 180 QMLEFRKKLPTYKMRKELMDMIKSSQVVVVSGETGCGKTTQLPQFILDDAISSGRGLSCK 239
Query: 238 IVCTQPRRISATSVAERISVERGENIGDN--IGYKIRLESKGGKH-SSIVFCTNGVLLRL 294
IVCTQPRRISA SVAER++ ERGE G + GY+IRL++K + +S+++CT G+L++
Sbjct: 240 IVCTQPRRISAISVAERVAKERGEECGGSGSCGYQIRLQAKFPRQQASMLYCTTGILIQW 299
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
+ S P+ +S+++HI++DEIHERD SDF++ I++ +L L++IL
Sbjct: 300 MQSD-----------PS---LSSISHIVLDEIHERDLLSDFIITIVKRLLAKRKDLKVIL 345
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+AD FS YF CP I +PGFTY V+ +YLE+V+ + K
Sbjct: 346 MSATLNADTFSSYFNFCPSINIPGFTYAVQEYYLEEVVKMTK 387
>gi|148703438|gb|EDL35385.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36, isoform CRA_b [Mus
musculus]
Length = 500
Score = 329 bits (843), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 260/421 (61%), Gaps = 18/421 (4%)
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
+ KF+IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE
Sbjct: 8 SDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKET 67
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+D NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P
Sbjct: 68 HFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTP 127
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+EELCLQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L
Sbjct: 128 LEELCLQIKILRLG-GIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLA 186
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA
Sbjct: 187 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL--GKEKIADARRKELAK-- 242
Query: 830 GGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+SD L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF
Sbjct: 243 ETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGF 302
Query: 888 I----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRL 941
+ P+D + N+ II AV+ AGLYP VA++R R+ V+ T V +
Sbjct: 303 VSSRSPKD-PKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSI 361
Query: 942 HPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDN 1001
HP S+N ++TD + + +++ +CT V P LL +I++ D
Sbjct: 362 HPKSVN----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ 417
Query: 1002 E 1002
E
Sbjct: 418 E 418
>gi|357440091|ref|XP_003590323.1| ATP-dependent RNA helicase Dhx29 [Medicago truncatula]
gi|355479371|gb|AES60574.1| ATP-dependent RNA helicase Dhx29 [Medicago truncatula]
Length = 1100
Score = 327 bits (838), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 194/457 (42%), Positives = 274/457 (59%), Gaps = 19/457 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
IDL L+E + IC + GAILVFL GW++I+K + L N + SKF+I+P+H +
Sbjct: 528 IDLGLVEATIEYICRNEGGGAILVFLTGWDEISKLFEELEKNYLLGNRSKFLILPIHGSM 587
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P++ Q ++F RPPP RKI+L+TNIAE++ITIDDVVYVID G+ KE SYD N +++L
Sbjct: 588 PTIDQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLASLLP 647
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SW+SKASA+QR GRAGR Q G+CY LY +L ++P++Q+PEI R P++ELCL +K L
Sbjct: 648 SWISKASARQRRGRAGRVQPGVCYRLYPKLIHDAMPEYQLPEILRTPLQELCLHIKSLQL 707
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
FL K L PP S+ ++NAI +L+ IGAL E++T LG L + + P + KML
Sbjct: 708 G-TAAPFLGKALQPPDSLAVQNAIELLKTIGALDNKEELTPLGRHLCTVPLDPNIGKMLL 766
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS------LYGGQSDQL 836
+ CL PALT+A + YR+PF LPI N KK A AK A + GQSD L
Sbjct: 767 MGSIFQCLSPALTIAASLAYRNPFVLPI--NRKKEADEAKRYFACDSRRLVIDMGQSDHL 824
Query: 837 AVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS 896
A++ AFE WK+AK RG E FC + F+S + ++ MR Q L GF+ + +
Sbjct: 825 ALVEAFEEWKDAKSRGDEKNFCWENFLSPATLRLIDDMRTQFLNLLSDIGFVDKSKGVQA 884
Query: 897 HNARVPGI--IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKL-SFK 953
+N + + + A+L AGLYP V + + + R T KV +HP S+N + SF
Sbjct: 885 YNQQSHDLEMVCAILCAGLYPNVVQCK--RRGHRTAFYTKEAGKVDIHPSSVNAGVHSFP 942
Query: 954 KTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P +VY E + +++R+ T + LLL
Sbjct: 943 ----LPYLVYSEKVK-TTSIYIRDSTNISDYALLLFG 974
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/223 (48%), Positives = 147/223 (65%), Gaps = 16/223 (7%)
Query: 172 IEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS 231
++ +L+++ R KLP K V NQV+++SGETGCGKTTQ+PQF+LE S
Sbjct: 256 LQASGSLKEMKSFREKLPAFKMKSEFLKAVQGNQVLVVSGETGCGKTTQLPQFILEEEIS 315
Query: 232 --KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNG 289
+G C I+CTQPRR+SA SVA RIS ERGE +G +GY IRLE+K + ++FCT G
Sbjct: 316 CLRGADCNIICTQPRRVSAISVAARISAERGETLGKTVGYHIRLEAKRSAETRLLFCTTG 375
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
VLLR LV +++ ++H++VDEIHER DF++ I+RD+LP P
Sbjct: 376 VLLRQLVQD--------------PELTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPD 421
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
LRLILMSAT++AD FS+YF P + +PGFT+PV +LEDVL
Sbjct: 422 LRLILMSATINADLFSKYFANAPTMHIPGFTFPVVEHFLEDVL 464
>gi|149064670|gb|EDM14821.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 500
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 259/421 (61%), Gaps = 18/421 (4%)
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
+ +F+IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE
Sbjct: 8 SDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKET 67
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+D NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P
Sbjct: 68 HFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTP 127
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+EELCLQ+K+L I FL + +DPP + +I L ++ AL E++T LG L
Sbjct: 128 LEELCLQIKILRLG-GIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLA 186
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA
Sbjct: 187 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL--GKEKIADARRKELAK-- 242
Query: 830 GGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+SD L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF
Sbjct: 243 ETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGF 302
Query: 888 I----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRL 941
+ P+D + N+ II AV+ AGLYP VA++R R+ V+ T V +
Sbjct: 303 VSSRSPKD-PKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSI 361
Query: 942 HPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDN 1001
HP S+N ++TD + + +++ +CT V P LL +I++ D
Sbjct: 362 HPKSVN----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ 417
Query: 1002 E 1002
E
Sbjct: 418 E 418
>gi|156382101|ref|XP_001632393.1| predicted protein [Nematostella vectensis]
gi|156219448|gb|EDO40330.1| predicted protein [Nematostella vectensis]
Length = 1403
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 230/718 (32%), Positives = 374/718 (52%), Gaps = 59/718 (8%)
Query: 425 LDEAISLAWSNDEFDMLLELVSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLS 483
+D++IS AW + D ++++ L + N+ +YQH+ T T LMV AG+G V LL+
Sbjct: 452 MDDSISQAWLKGDDDSFVQILHLIMNENISVDYQHSETQATALMVAAGRGCAAVVEQLLA 511
Query: 484 LGADCQLK-AKDGRTALQLGEQENQPEVAQIIKKHMENA----------------LSDSM 526
LGA+ ++ K+ A+ ++ + +V +++ +M ++ LS+
Sbjct: 512 LGANPHIRDPKNNWIAIDWAKKWDHTDVIELLDSNMRSSHAPYSDDVTLEKQSTELSEET 571
Query: 527 KQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF 586
K+ LL Y T + + +DL LI L+ IC + GA+LVFLPG++DI RD L ++
Sbjct: 572 KE-LLAVYHKTFDDDRVDLDLIYCLIDHICNSGQQGAVLVFLPGYDDIITLRDILASSKE 630
Query: 587 FRDTSKFVIIPLHS-MVPSVQQK-KVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSG 644
+ +T ++ + LHS M P Q+K VF++ PP RKI+LSTNIAET++TIDDVV+VIDSG
Sbjct: 631 YGNTKRYQLFTLHSSMQPGEQRKASVFRKLPPTVRKIVLSTNIAETSVTIDDVVFVIDSG 690
Query: 645 RMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPE 704
++KEKS+D +VSTLQ +WVSKASA QR GR+GRC C+ L+ S+ F +P+
Sbjct: 691 KVKEKSFDALTSVSTLQVAWVSKASAVQRRGRSGRCSQ--CFPLFQIWPLFSVFPF-IPD 747
Query: 705 IKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
+ + P ++ + + CN+ L T P +++I + I AL+ E +T+L
Sbjct: 748 LVK-PGAKVVILIS-SSTRCNMLIELHSTSIYP---NKKHSIKIYWTIDALNKWEDLTDL 802
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V P + KM+ +++++ CLDP +T+ACA YRDPF LP+ EK+ A AK
Sbjct: 803 GRHLADLPVEPRLGKMILYSVVLKCLDPVITVACALAYRDPFVLPMYAAEKRAAAVAKRR 862
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
+ SD L + AF W+ A+ G + FC + ++S + M+ GM+ Q+ L
Sbjct: 863 F--IIDQYSDHLLFVKAFRGWQKARAEGLDKSFCQRNYLSPASLEMMSGMKSQIIGHLKT 920
Query: 885 NGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARL-RPPHKNGRRFVETAGGAKV 939
GFI D+ + N+ ++ A L AG+YP +AR+ R +K + T KV
Sbjct: 921 CGFIRPRGAGDLRDLNTNSNNWAVVKAALCAGMYPQIARVDRLDNK-----LTTPKETKV 975
Query: 940 RLHPHSLNFKL----------SFKKTDDCP--LMVYDEITRGDGGMHVRNCTVVGPLPLL 987
R+H S+ ++ K P ++Y+E+TR + V+ CT V P+ +
Sbjct: 976 RIHTSSILYQAPEKNESQSLSQAKAVKQLPSDWLIYEEMTRMYTSVSVKCCTAVHPIAVA 1035
Query: 988 LLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSV 1047
L A AP + +D D + ES+ + ++ G S D
Sbjct: 1036 LFAGPSLSAPNLEPGEDKSRDTERRNSEGRWESESSDSDAEESKPGD------KSRDNQA 1089
Query: 1048 TVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILS 1105
+ VD W+ + + LR +L + + ++ P + V E + A+ ++LS
Sbjct: 1090 ELKVDDWISMLGSDETVELASFLRHKLQIVFMRRIRAPSRPWSQVDETVVRAVVAVLS 1147
Score = 239 bits (610), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 211/387 (54%), Gaps = 30/387 (7%)
Query: 9 AEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEV-YTFDANLSNRERAVVHEVCKK 67
A+++ K + Q+ V E +I + LD F + + F ++ + ERA +H +C
Sbjct: 2 ADKRGPKGLRNQNICVKEEFKIAVKIALDKFRYDETQKELEFPSSFTAVERAYIHRLCLN 61
Query: 68 MGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGE 127
+G+ S+S G+G R +SV S K V+ + + V+ + +P E
Sbjct: 62 LGLKSRSRGKGSNRFLSV--SNKEVKAGSSS---TQIGLCPSALQVIDSVNKKFPLTQKE 116
Query: 128 PGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSK 187
+ L R+ R D F + K+ S+ + ++ R
Sbjct: 117 -RQDLQPRSERQGAPFEYGRRDKF----------SGKLSSIPPAVPPTTCENELTAFRKS 165
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPI + I + NQV+L+SGETG GKTTQVPQF+LE+ C+I+CTQPRRIS
Sbjct: 166 LPIWEQRQDIIKCIKDNQVILVSGETGSGKTTQVPQFILEYSAQVSSPCRIICTQPRRIS 225
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
A SVAER++ ERGE IG GY+IRLES+ + + +CTNGVLLR L+ QG
Sbjct: 226 AMSVAERVAAERGERIGQTAGYQIRLESRVSGKTLLTYCTNGVLLRTLM-QG-------- 276
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQY 367
+ +S +THIIVDEIHERDR+SDF+L +R++L +++L+LMSA LD D F +Y
Sbjct: 277 ----DNSLSFITHIIVDEIHERDRFSDFLLISLRELLSFNKNIKLVLMSAALDIDLFVEY 332
Query: 368 FGGCPVIQVPGFTYPVKSFYLEDVLSI 394
FG CPVI VPG + V +LEDVL +
Sbjct: 333 FGKCPVINVPGRCFDVDVLFLEDVLHL 359
>gi|196000809|ref|XP_002110272.1| hypothetical protein TRIADDRAFT_22905 [Trichoplax adhaerens]
gi|190586223|gb|EDV26276.1| hypothetical protein TRIADDRAFT_22905 [Trichoplax adhaerens]
Length = 981
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/458 (38%), Positives = 265/458 (57%), Gaps = 14/458 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+D LIE ++ I E GAIL FLPGWEDI K +RL +P+F + +++IIPLHS +
Sbjct: 427 LDFELIEDIITYISDHMEKGAILCFLPGWEDIRKLYERLRLSPYF-SSGRYLIIPLHSQL 485
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
+V Q+K+F++P P RKI+++T+IAET+ITI+DV +VID G++KEK+YDP + + L
Sbjct: 486 STVNQRKIFEKPLPSVRKIVIATDIAETSITINDVSFVIDCGKVKEKAYDPTSGLEVLSP 545
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W SKASA+QRAGRAGR +AG C++LY+Q + + +FQ+PE+ R P+EE+CLQ+K L
Sbjct: 546 VWTSKASAQQRAGRAGRVKAGHCFYLYTQFHKSKMQEFQLPEMLRTPLEEICLQIKKLKL 605
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL K +D P S + AI +L+D+ L+ DE +T LG L L ++P + K++
Sbjct: 606 GM-IAPFLSKAVDAPDSEAVARAIALLKDLNGLNDDESLTPLGHYLAALPLNPRLGKIII 664
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CL PA+ ++ +RDPF + E R FE S+ SD L + AF
Sbjct: 665 FGALFSCLYPAVIISAFLGHRDPFVFVMDDREASRRARKSFEHDSI----SDHLTLFNAF 720
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDVSSCSHNARV 901
+ WK AK + FC +S+ +NM+ M Q L + GFI +D+ + +N
Sbjct: 721 KSWKKAKYNRNDYDFCRSNLLSASGLNMVHKMADQFGDLLHEIGFIDTKDIKANRYNVNS 780
Query: 902 --PGIIHAVLMAGLYPMVARLRPPHKNGRR--FVETAGGAKVRLHPHSLNFKLSFKKTDD 957
++ A+L AGLYP V + N +R + T V HP S++ +F +
Sbjct: 781 GNSNLVKAILCAGLYPNVIHVEHRQTNNKRPPKLSTRHDRAVFFHPSSVHHNRNFFSS-- 838
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
++Y + + D + + + T+V P LL +I V
Sbjct: 839 -KWLIYHKKMKLDSQIKIFDATMVTPFSLLFFGGDIQV 875
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 146/217 (67%), Gaps = 19/217 (8%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCT 241
ER KLPI + D I + + SNQ+V+ISG+TGCGKTTQ+PQF+L+ G CKI CT
Sbjct: 163 ERQKLPIYAMHDDIMNLIHSNQIVVISGQTGCGKTTQLPQFILDDAICSGNGSLCKIACT 222
Query: 242 QPRRISATSVAERISVERGENIGDN--IGYKIRLESKGGKHS-SIVFCTNGVLLRLLVSQ 298
QPRRISA SVAER+ ER E N GY+IRLE+K ++ S+++CT G+LLR L
Sbjct: 223 QPRRISAISVAERVLDERIEKNQPNPSAGYQIRLENKLPRNQGSMIYCTTGILLRQL--- 279
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
N P +S +H+I+DEIHER+ SDF+L ++D+L P L+++LMSAT
Sbjct: 280 --------QNDPL---LSQYSHLIIDEIHERNLMSDFLLIYLKDILSKRPDLKVVLMSAT 328
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
L+A FS YF CP++++PG Y V+ +Y+ED++S+L
Sbjct: 329 LNAASFSSYFNNCPIVEIPGSLYSVRHYYMEDIISML 365
>gi|328711816|ref|XP_001947767.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Acyrthosiphon pisum]
Length = 1055
Score = 320 bits (820), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/467 (40%), Positives = 275/467 (58%), Gaps = 18/467 (3%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+L E D LI +L+ IC + +DGAILVFL GW+ I+K ++L + F +TS++
Sbjct: 515 WLENPTSEDTDYELILELIYYICNNKDDGAILVFLSGWDQISKL-TKILKDKGFGNTSRY 573
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
++IPLHSM+P+V QK VF+ PP G RKIILSTNIAET++TIDDVVYVI++GRMK K +D
Sbjct: 574 ILIPLHSMLPTVSQKSVFESPPRGVRKIILSTNIAETSVTIDDVVYVINNGRMKLKGFDA 633
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
NN+ TL WVS A+++QR GRAGR + GICYHLY++ R S D+ +PE+ R +EE+
Sbjct: 634 ENNIGTLNEEWVSLANSRQRRGRAGRVRPGICYHLYTRGRERSFNDYVLPEMMRTSLEEV 693
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ K+L + FL+K ++PP + + A+ +L D+ AL E +T LG L L +
Sbjct: 694 ILQAKILQVGM-VTPFLEKVMNPPETKALEVALKLLIDLNALDEKENLTPLGFHLAKLPI 752
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
PL KM+ + CL P +T+A + +++DPF +P N++ + K E+ G QS
Sbjct: 753 GPLEGKMIILGAMFSCLSPIMTIAASLNFKDPFVMP--ANKEYQCREIKKEMDE--GHQS 808
Query: 834 DQLAVIAAFECWKNAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
D L V A + AKQ + AW FC F+ MNML ++ Q L GFI
Sbjct: 809 DHLMVTRAMSKFLLAKQENR-AWDFCRDNFLMYNTMNMLHELKSQYAKYLCDLGFIKTSS 867
Query: 893 ---SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHK-NGRRFVE--TAGGAKVRLHPHSL 946
S + N+ ++ VL AGL P +A P K NGR+ + TA KV +HP S+
Sbjct: 868 YTDSEYNQNSNNVKLLKCVLAAGLCPNIAVSNPKIKTNGRKLSKFITAEDGKVEIHPKSV 927
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
N S+ ++ PL++Y + + + + T++ P P++L A +
Sbjct: 928 NSTDSYFES---PLLLYHTKLK-TTSIFLHDTTMIYPFPVVLFAKSL 970
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 152/220 (69%), Gaps = 18/220 (8%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETC 236
R + E R KLP S KD I + NQV+LISGETGCGKTTQ+ QF+L+ + +G TC
Sbjct: 263 RSMCEIRKKLPSYSKKDEILELIHRNQVILISGETGCGKTTQMAQFILDDAIMSGRGSTC 322
Query: 237 KIVCTQPRRISATSVAERISVERGENIGD-NIGYKIRLESKGGK-HSSIVFCTNGVLLRL 294
+IVCTQPRRISA SVAER++ ER E IG+ ++GY+IRLE K G+ + SI+FCT G+LL
Sbjct: 323 RIVCTQPRRISAISVAERVADERAERIGEASVGYQIRLERKLGREYGSILFCTTGILL-- 380
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
Q + R ++ +HII+DEIHERD SDF L I++ ++P P +++IL
Sbjct: 381 ---QHIQR---------DSALNYYSHIIIDEIHERDTISDFTLTILKSIIPVRPDIKVIL 428
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
MSATL+A FS+Y+ CP + +PGFTYPV+ YLED+ ++
Sbjct: 429 MSATLNAAAFSKYYNDCPSLNIPGFTYPVEELYLEDIYTL 468
>gi|224113343|ref|XP_002316463.1| predicted protein [Populus trichocarpa]
gi|222865503|gb|EEF02634.1| predicted protein [Populus trichocarpa]
Length = 1077
Score = 316 bits (810), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/487 (35%), Positives = 274/487 (56%), Gaps = 18/487 (3%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + + D++ + + Y LA P+ I LIE +L IC GA+LVF
Sbjct: 405 KNQITTLVEDALNKSSFENYSSRARDSLACWMPDCIGFNLIEAVLCHICRKERPGAVLVF 464
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GWEDI+ RD+L A+P D ++ +++ H + + +QK +F++PPP RKI+L+TN+
Sbjct: 465 MTGWEDISSLRDQLKAHPLLGDPNRVLLVTCHGSMATSEQKLIFEKPPPNVRKIVLATNM 524
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AE +ITI+D+V+V+D G+ KE +YD NN L SW+SKASA+QR GRAGR Q G CYH
Sbjct: 525 AEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISKASARQRKGRAGRVQPGECYH 584
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY + + ++Q+PE+ R P+ LCLQ+K L +I +FL L PP S+ ++NAI
Sbjct: 585 LYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVG-SIGEFLSAALQPPESLAVQNAIG 643
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGAL E +T LG+ L L V P + KML + C DP LT+ RDPF
Sbjct: 644 FLKMIGALDEKENLTNLGKYLTMLPVDPKLGKMLIMGAIFHCFDPVLTIVSGLSVRDPFL 703
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
LP ++K A AK ++ SD +A++ A+E WK A++ G +C + F+S+
Sbjct: 704 LP--QDKKDLAGTAKSRFSA--KDYSDHMALVRAYEGWKEAEREGSAYEYCWRNFLSAQT 759
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNG 927
+ + +RKQ L G + ED S+ + + ++ A++ +GLYP +A + H+
Sbjct: 760 LQAIHSLRKQFNFILKDTGLVEEDASNNNKLSHNQSLVRAIICSGLYPGIASV--VHRET 817
Query: 928 RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
+T +V L+ +S+N + +T P +V+ E + + + +R+ T V L+
Sbjct: 818 SMSFKTMDDGQVFLYANSVNARY---ETIPYPWLVFGEKVKVN-TVFIRDSTGVSDSILI 873
Query: 988 LLATEIA 994
L +A
Sbjct: 874 LFGGALA 880
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 155/218 (71%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETC 236
R++++ R LP K+ + + NQV++ISGETGCGKTTQ+PQ++LE I S +G C
Sbjct: 170 RKMMDFRKSLPAFKEKERLLQAIAKNQVIVISGETGCGKTTQLPQYILESEIESGRGAFC 229
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SVA+R+S ERGE +G+ +GYK+RLE GK++ ++FCT+G+LLR L+
Sbjct: 230 SIICTQPRRISAMSVADRVSAERGEPLGEAVGYKVRLEGVKGKNTHLLFCTSGILLRRLL 289
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
S +++ +TH+ VDEIHER DF+L +++D+LP LRLILMS
Sbjct: 290 SD--------------HNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRQDLRLILMS 335
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATL+A+ FS YFGG P I +PGFTYPV++ +LEDVL +
Sbjct: 336 ATLNAELFSNYFGGAPAIHIPGFTYPVRTQFLEDVLEM 373
>gi|224111576|ref|XP_002315906.1| predicted protein [Populus trichocarpa]
gi|222864946|gb|EEF02077.1| predicted protein [Populus trichocarpa]
Length = 1053
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/491 (36%), Positives = 282/491 (57%), Gaps = 19/491 (3%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + +++ D+++ +Y L+ NP+ I L+E LL IC + GA+LVF
Sbjct: 385 KSQIASSVEDALRTADFKEYSSQTRESLSCWNPDSIGFNLVEYLLCNICENERPGAVLVF 444
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DI+ +D+L A+PF D S+ +++ H + S +Q+ +F P G RKI L+TNI
Sbjct: 445 MTGWDDISSLKDKLQAHPFLGDPSRVLLLTCHGSMASSEQRLIFDEPEEGVRKIALATNI 504
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET+ITI+D+V+V+D G+ KE SYD NN L SW+SK SA+QR GRAGR Q G CYH
Sbjct: 505 AETSITINDIVFVLDCGKAKESSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGECYH 564
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY + + ++Q+PEI R P++ +CLQ+K L +I DFL + L P + ++NAI
Sbjct: 565 LYPRCVYDAFAEYQLPEILRTPLQSICLQIKSLKLG-SISDFLSRALQSPELLAVQNAIE 623
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGAL +E +T LG L L V P + KML +++CLDP LT+ RDPF
Sbjct: 624 YLKIIGALDQNENLTVLGRYLTMLPVEPKLGKMLVLGAILNCLDPVLTVVAGLSVRDPFL 683
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
+P+ ++K A AAK + + G SD LA++ A+E WK+A++ +C + F+S
Sbjct: 684 MPL--DKKDLAEAAKSQFS---GDYSDHLALVRAYEGWKDAERDLSGYEYCWKNFLSVQS 738
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNG 927
M + +RK+ + L+ G + + ++C+ + ++ AV+ +GLYP + + H
Sbjct: 739 MKAIDSLRKEFFSLLMDTGLVDGNPTTCNAWSHDEHLVRAVICSGLYPGICSI--VHNEK 796
Query: 928 RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
++T +V LH +S+N + S P +V++E + + + +R+ T V LL
Sbjct: 797 SFSLKTMEDGQVLLHSNSVNARES---KIPYPWLVFNEKIKVN-SVFLRDSTAVSDSVLL 852
Query: 988 LLATEIAVAPA 998
L I+ A
Sbjct: 853 LFGGSISRGDA 863
Score = 232 bits (592), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 159/229 (69%), Gaps = 18/229 (7%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETCK 237
+++E R LP KD I + + NQ+V+ISG TGCGKTTQ+PQF+LE + S +G C
Sbjct: 152 KMLEFRKTLPAYKEKDAILAAISQNQIVIISGATGCGKTTQIPQFILESEVESVRGAVCN 211
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I+CTQPRRISA SV+ERI+ ERGE +G+ +GYK+RLE GK + ++FCT G+LLR L+
Sbjct: 212 IICTQPRRISAMSVSERIASERGEKLGERVGYKVRLEGVKGKDTHLLFCTTGILLRRLL- 270
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
V R + +TH+IVDEIHER DF+L +++D+LP P L+LILMSA
Sbjct: 271 --VDR-----------SLKGITHVIVDEIHERGMNEDFLLIVLKDLLPHRPELKLILMSA 317
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI--LKSAESNHLD 404
TLDA+ FS YF G P++++PGFT+PV++ +LE++L + + + N +D
Sbjct: 318 TLDAELFSSYFDGAPILRIPGFTFPVRTHFLENILEMTGYRLTQCNQID 366
>gi|387219153|gb|AFJ69285.1| ATP-dependent RNA helicase DHX36 [Nannochloropsis gaditana CCMP526]
Length = 851
Score = 312 bits (800), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 182/466 (39%), Positives = 263/466 (56%), Gaps = 26/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A + + I L+E L++KI + GAILVFLPGWEDI K + L P + ++
Sbjct: 33 MAAFDEDEIPYALVEALVKKIDAEEGPGAILVFLPGWEDITKVHETLQRLP---QSRRWR 89
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
+ PLHS +P QQ+++F PPPG RKI+L+TNIAE++ITIDDVVYV+D G+ KEK+YD
Sbjct: 90 LYPLHSQLPMDQQREIFSPPPPGLRKIVLATNIAESSITIDDVVYVLDGGKHKEKTYDAE 149
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEEL 713
+ L +WVS+ASA QR GRAGR Q G C+HL+ + + L FQ+PEI R P+E L
Sbjct: 150 KKLCMLLPAWVSRASAIQRKGRAGRVQPGKCWHLFPRRKFEGDLIPFQLPEIVRTPLESL 209
Query: 714 CLQVKLLD----PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
CL V+ L+ I +FLQK + PP + NA+ +L IGA+ DE +T LG+ L
Sbjct: 210 CLSVRALNVARRGRGGIVEFLQKAVTPPTDTAMSNALELLLHIGAIQPDEHLTSLGKCLA 269
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V P + K L + +L+ CLDP LT+ + PF LP+ K A +K +LA
Sbjct: 270 TLPVEPTIGKALIYGVLLRCLDPVLTIVSLLSTKSPFVLPL--ERKDEAARSKIQLAG-- 325
Query: 830 GGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP 889
G SD A+++A++ WK A+ RGQ F + F+S + M+ MRKQ T L G +P
Sbjct: 326 GEASDHKALLSAYDGWKEAEMRGQGRDFAWRNFLSGPTLVMVDDMRKQFLTLLKDAGLLP 385
Query: 890 E-------DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLH 942
+ + +AR ++ A L+AGLYP V R+ K F +T G ++LH
Sbjct: 386 QYEPRTGLGRDYYNAHARSWPVVKAALLAGLYPNVLRVDYGKKRPTFFTQTDG--MLKLH 443
Query: 943 PHSLNFKLSFKKTDDCPL-----MVYDEITRGDGGMHVRNCTVVGP 983
P S+N P+ M++ + + G+ V + + V P
Sbjct: 444 PSSINAPPEGSGGPPAPVLFHRWMMFFQKLKTPAGLFVFDTSEVSP 489
>gi|196000807|ref|XP_002110271.1| hypothetical protein TRIADDRAFT_54096 [Trichoplax adhaerens]
gi|190586222|gb|EDV26275.1| hypothetical protein TRIADDRAFT_54096 [Trichoplax adhaerens]
Length = 897
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 265/459 (57%), Gaps = 17/459 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+D LI+ LL I + E+GAIL F+PGW+DI K + L+ NP F + ++VI+PLHS +
Sbjct: 388 LDFTLIQDLLIHINSNMEEGAILCFVPGWDDIRKLYETLIGNPRF-SSDQYVILPLHSQL 446
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
+ Q+K+F +P RKII++T+IAET+IT++DV +VID G++KEK YD TL
Sbjct: 447 STANQRKIFDKPQQSVRKIIIATDIAETSITVNDVCFVIDCGKVKEKLYDAVGGFETLAP 506
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W SK+SA+QRAGRAGR Q G C++LY + A + ++ +PEI R P++ELCLQ+K L+
Sbjct: 507 VWTSKSSARQRAGRAGRVQPGHCFYLYPKFIAQHMQEYNLPEILRTPLDELCLQIKKLNL 566
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL K LDPP + AI +L+D+ A++ DE +T LG L L V P + K++
Sbjct: 567 GM-ISPFLSKALDPPDDGAVARAIHLLKDLNAMNSDESLTPLGYYLATLPVDPRIGKIIL 625
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F + CL PA+ ++ +DPF P+ + KF S SD L + AF
Sbjct: 626 FGAMFSCLYPAVVISAFLATKDPFIFPMDRKAEVYKIRKKFSGNSF----SDHLTSVVAF 681
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDVSS--CSHNA 899
W+ A QR A FC ++S + +LG+ +Q L + GF+ +++ S ++N+
Sbjct: 682 YTWEKAMQRKTAAEFCRDNYLSQSGLRTILGLAQQFCNLLYEIGFVDTKNIRSQNYNYNS 741
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRR---FVETAGGAKVRLHPHSLNFKLSFKKTD 956
++ A++ AGLYP V +++ ++N +R T G +V LH S+ LS +
Sbjct: 742 SNEKLLKAIICAGLYPSVLQIK--YRNNKRRSPRFYTRSGEQVNLHQSSV---LSNYRRF 796
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
D +VY + + +HV + T+V PL LL +I V
Sbjct: 797 DSDWLVYHKKMKLGEQVHVFDTTMVSPLSLLFFGGDIDV 835
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 28/282 (9%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGE 234
+ +Q+++ R KLPI S ++ I ++ NQ ++ISG TGCGKTTQ+PQF+L+ + G
Sbjct: 118 HYQQLLDVRKKLPIFSMQNKILKSIRDNQAIVISGHTGCGKTTQLPQFILDEAIDNNNGS 177
Query: 235 TCKIVCTQPRRISATSVAERISVERGENI--GDNIGYKIRLESK-GGKHSSIVFCTNGVL 291
CKI+CTQPRRISA SVAERI ERGE G ++GY+IRLE+K ++ SI+ CT G+L
Sbjct: 178 LCKILCTQPRRISAISVAERIQDERGEKKQPGSSVGYQIRLETKLPRRYGSIILCTTGIL 237
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
LR L S + +S +H+I+DEIHERD SDF+L ++D+L P L+
Sbjct: 238 LRKLQSDPL--------------LSQYSHLIIDEIHERDAMSDFLLICLQDILVKRPDLK 283
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVP 411
+ILMSATL+A +FSQYF CP+I++PG YPVK +YLED+++ L + ++ +
Sbjct: 284 VILMSATLNAKKFSQYFNNCPIIEIPGTLYPVKHYYLEDIITFLNNRKNYYQPKV----- 338
Query: 412 NEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNV 453
+P+ + E+K +E IS D + LE S + SP V
Sbjct: 339 -RNPQDSGEDKMN-NEIIS--SETDAWYKYLETTSNKYSPTV 376
>gi|302755863|ref|XP_002961355.1| hypothetical protein SELMODRAFT_437743 [Selaginella moellendorffii]
gi|300170014|gb|EFJ36615.1| hypothetical protein SELMODRAFT_437743 [Selaginella moellendorffii]
Length = 1420
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 256/462 (55%), Gaps = 13/462 (2%)
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
E ID LIE+LL IC ++GA+LVF+ GWEDI+ R +L +P S+ ++ H
Sbjct: 475 ESIDFTLIEKLLCHICEHGQEGAVLVFMTGWEDISALRRQLRTHPVLGHPSRVWLLACHG 534
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ +QK++F RPP RKIIL+TNIAET+IT++DVVYV+D G+ KEKSYD N + L
Sbjct: 535 TMSPDEQKRIFDRPPSRVRKIILATNIAETSITVEDVVYVVDIGKAKEKSYDVATNTACL 594
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
W+SK+S +QR GRAGR + G+CYHLY + + D PEI R + +CL++K L
Sbjct: 595 LPRWISKSSVRQRKGRAGRLKPGVCYHLYPESVFQAFEDHNEPEILRTALHNVCLRIKGL 654
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
+I+ FL K ++PP + AI L+ IGAL E++T LG+ L L V P + KM
Sbjct: 655 QLG-DIQTFLAKAIEPPNRHAVHIAIEFLKVIGALDETEELTVLGKHLAILPVEPQIGKM 713
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
L + CLDP LT+A A RDPF LP+ E KF + G SD LAV+
Sbjct: 714 LIMGCIFQCLDPMLTIAAALSSRDPFILPVDKREDSNQAKFKFSI----GEMSDHLAVVR 769
Query: 841 AFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNAR 900
AF W+ + + FC F+S V+ + MRKQ + L + G++ ++SC +
Sbjct: 770 AFNDWEVCMKHNTASEFCRANFLSMQVLIGMTSMRKQFLSLLQEAGYLDGGLASCEAYSS 829
Query: 901 VPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC-P 959
P I+ AV+ AGL+P VA + G +T G V +HPHS+N + + C P
Sbjct: 830 DPMIVRAVICAGLFPGVAAVVA--TPGSVTHKTMDGTVVHVHPHSVN----ARHEESCFP 883
Query: 960 LMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDN 1001
+V+ E + + +R+ T + LLL + P +
Sbjct: 884 WLVFLEKIK-TSNVFIRDSTGISDSVLLLFGGALVSIGQPGH 924
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 144/214 (67%), Gaps = 18/214 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQ 242
RSKLP + ++ QV++++G TGCGKTTQ+PQ++LE G +CKIVCTQ
Sbjct: 227 RSKLPAFQLRSAFLESLSRCQVLVVTGGTGCGKTTQLPQYILESEIDGGCGSSCKIVCTQ 286
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRISA+SVA R++ ERGE +G+++GY++R +S + +S++FCT G+LLR L+S V
Sbjct: 287 PRRISASSVALRVAEERGEVLGESVGYQVRFDSVRSRSTSLLFCTTGILLRRLMSDPV-- 344
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
++ +TH+IVDEIHER DF+L ++RD++ P L+LILMSAT+DA
Sbjct: 345 ------------LNGVTHVIVDEIHERGLNEDFLLIVLRDVIQRRPDLKLILMSATVDAK 392
Query: 363 RFSQYF--GGCPVIQVPGFTYPVKSFYLEDVLSI 394
F +YF + +PGF Y VKS+YLEDVL+I
Sbjct: 393 LFEKYFLDLNTRCMDIPGFAYTVKSYYLEDVLNI 426
>gi|297672309|ref|XP_002814248.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Pongo abelii]
Length = 481
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/409 (43%), Positives = 249/409 (60%), Gaps = 18/409 (4%)
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+
Sbjct: 1 MPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMS 60
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+ WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 61 AEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILR 120
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 121 LG-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMI 179
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ A
Sbjct: 180 LFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNA 235
Query: 842 FECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSC 895
FE W+ A++RG E +C YF+SS + ML M+ Q L+ GF+ P+D S
Sbjct: 236 FEGWEEARRRGFRYEKDYCWDYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES- 294
Query: 896 SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFK 953
+ N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N +
Sbjct: 295 NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VE 350
Query: 954 KTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+TD + + +++ +CT V P LL +I++ D E
Sbjct: 351 QTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 399
>gi|145351945|ref|XP_001420320.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580554|gb|ABO98613.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 811
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 187/504 (37%), Positives = 287/504 (56%), Gaps = 37/504 (7%)
Query: 518 MENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+ A+ +S ++ + +Y L ++ E I+ L+E L+ I + E+GAIL+FLPG
Sbjct: 262 LREAVEESFERSAMSEYSETTWKSLQVIDEEKINYELMELLVALIADEYEEGAILIFLPG 321
Query: 571 WEDINKTRDRLLANPFFRDT-SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAE 629
+I DRL AN +D+ S+F++IPLHS + S +Q+ F + PPG RK++++TNIAE
Sbjct: 322 MAEIRTLHDRLRAN--LKDSESRFLLIPLHSTLSSEEQRLTFNKAPPGKRKVVMATNIAE 379
Query: 630 TAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY 689
T+ITIDDVV+VIDSGR++E YDP + +S L ++W SKAS++QR GRAGR + G C+HLY
Sbjct: 380 TSITIDDVVFVIDSGRVRETQYDPVSRMSALVTAWCSKASSRQRRGRAGRVREGYCFHLY 439
Query: 690 S-QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIV 748
S + A L DF PEI R P++ LCLQ+K+L +I FL ++PP I +A+
Sbjct: 440 STKTEATVLADFTTPEILRTPLDALCLQIKILGLG-DIRKFLSMAIEPPPEGAIASALKS 498
Query: 749 LQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTL 808
L ++ A+ +++T LG L L V + KM+ + + CLDP LT+A +R PF
Sbjct: 499 LHELDAVDSKDELTALGHHLAELPVDARLGKMMLYGAMFSCLDPILTIAAGVGFRSPFLA 558
Query: 809 PISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW--KNAKQRGQEAWFCSQYFVSSG 866
P+ +++ A AAK ++A+ SD L ++ A+ W AK RG E + S+ F+S
Sbjct: 559 PM--DKRDEADAAKRKIAA---QASDHLTLVRAYAGWIHARAKGRGFERDYLSKLFLSGQ 613
Query: 867 VMNMLLGMRKQLQTELIKNGFIPEDVSSCSH----NARVPGIIHAVLMAGLYPMVARLRP 922
+ + MR+Q L + GF+ + NA ++ AV+ AGLYP VA
Sbjct: 614 TLKQISEMRQQYTDLLDQIGFLRSGAGALGAVSAVNAGNESLVRAVICAGLYPNVALASA 673
Query: 923 PHK--NGR---RF------VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
P K +GR R+ V T V +HP S+ + +S + D ++Y E R
Sbjct: 674 PAKTDDGRARSRYPTSSVAVRTKHDTDVHMHPTSVCYGMS--PSVDSRFLLYHEKVR-TT 730
Query: 972 GMHVRNCTVVGPLPLLLLATEIAV 995
+++R+ T VG PLLL +I +
Sbjct: 731 KVYIRDATAVGSYPLLLFGGKIKI 754
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 135/217 (62%), Gaps = 21/217 (9%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET--CKIVC 240
E R KLP + K V+ ++S+ ++SG TGCGKTTQVPQF+ E G+ I+
Sbjct: 21 EIRRKLPAHNLKSVVLEAIESSNAAVVSGATGCGKTTQVPQFIFEEAIRAGKAGDTSIII 80
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR+SA +VAER++ ER E IGD +GY IRLESK + + ++FCT G+LLR
Sbjct: 81 TQPRRLSAIAVAERVANERCERIGDTVGYSIRLESKQSEKTRMLFCTTGILLR------- 133
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
RL+ N ++ ++H++VDE+HERD SDF+L I+R + L+ MSAT++
Sbjct: 134 -RLQTDPN------LTGVSHVVVDEVHERDLLSDFLLVILRSLAARRSDFHLVAMSATVN 186
Query: 361 ADRFSQYFGG-----CPVIQVPGFTYPVKSFYLEDVL 392
AD F YF CPV+++PG T+PV + LED +
Sbjct: 187 ADLFKNYFESHLKTTCPVVEIPGRTFPVAEYRLEDAI 223
>gi|443685713|gb|ELT89229.1| hypothetical protein CAPTEDRAFT_101871 [Capitella teleta]
Length = 847
Score = 309 bits (792), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 188/502 (37%), Positives = 281/502 (55%), Gaps = 68/502 (13%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF--RDTSKFVI 595
+N ELI+L L+E ++ +GA+LVFLPG +I + + LL NP F R+ S+F I
Sbjct: 288 INNELIEL-LLEWIVDGPHQYPREGAVLVFLPGLAEIKQVYELLLTNPVFGGRNKSRFWI 346
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
+PLHS + S Q +VF PP G KI+L+TNIAET+ITIDDVVYVIDSGRMKEK YD
Sbjct: 347 LPLHSTLSSEDQHRVFSTPPKGTTKIVLTTNIAETSITIDDVVYVIDSGRMKEKRYDASK 406
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-----VPEIKRIPI 710
++ +L W SKA+A+QR GRAGR +G+ +HL++ R D+ +PEI+R+P+
Sbjct: 407 SMESLDLVWESKANAQQRKGRAGRVASGVAFHLFTSHRH----DYHMKPQPIPEIQRVPL 462
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
E+L L++K+LD N++D L + ++PP + I A LQD+GAL LD+ +T LG L
Sbjct: 463 EQLILRIKILDLFDNMQDVLSQLIEPPADIGIETAKSRLQDLGALDLDKNLTPLGYHLAS 522
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYG 830
L V + K++ F + CLD ALT+A YR PF P +++ A K + A
Sbjct: 523 LPVDVRIGKLMLFGAIFRCLDSALTIAATLSYRSPFVSPF--DKRNEADKCKLDFAI--- 577
Query: 831 GQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN-GF 887
G SD L ++ A++ W A++ G +A FC + F+S M ML M+ Q TEL+ + GF
Sbjct: 578 GNSDHLTMLNAYKSWIKAQKDGSQAAFRFCQENFLSIKTMQMLATMKHQF-TELLSDIGF 636
Query: 888 IPEDV---------------------SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKN 926
I E + + HN + ++ A+L+A L+P V +++ P
Sbjct: 637 IREGILCRDLERKFRGSDGVLAVTGQEANVHNDNMK-LLSAILVAALFPNVVQIKTPEA- 694
Query: 927 GRRFVETAGGAKVRL------------------HPHSLNFKLSFKKTDDCPLMVYDEITR 968
++ +T GA RL HP S+NF++ + D P +VY E +
Sbjct: 695 --KYSKTGEGAVARLPKPEELRFSTKSDGYVSIHPSSVNFQVRYY---DSPYLVYHEKIK 749
Query: 969 GDGGMHVRNCTVVGPLPLLLLA 990
+++R+C++V PLLL
Sbjct: 750 -TTKVYIRDCSMVSVYPLLLFG 770
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 145/225 (64%), Gaps = 20/225 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWSK-GETCKIVCTQ 242
R +LP + + I + QV++ISG TGCGKTTQVPQF+L+ + SK G+ I+CTQ
Sbjct: 5 RHRLPAAKWDLEIVQMLKHGQVLVISGMTGCGKTTQVPQFILDASLKSKTGQVANILCTQ 64
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRISA SVAER++ ER E +G +GY+IRLES + ++FCT G+LLR L S
Sbjct: 65 PRRISAMSVAERVADERAEKLGGIVGYQIRLESVMSTRTRLLFCTTGILLRRLESDPT-- 122
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
+ +THI++DE+HER SDF++ ++R++LP L++ILMSATLDA
Sbjct: 123 ------------LQGVTHILIDEVHERSEDSDFLMMVVRNLLPQRYDLKVILMSATLDAG 170
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSAS 407
FS YF CP +++PG T+PV+ ++LEDV+ + HLD S
Sbjct: 171 LFSAYFNDCPRLEIPGRTFPVEQYFLEDVIEM----TGYHLDERS 211
>gi|302798320|ref|XP_002980920.1| hypothetical protein SELMODRAFT_154147 [Selaginella moellendorffii]
gi|300151459|gb|EFJ18105.1| hypothetical protein SELMODRAFT_154147 [Selaginella moellendorffii]
Length = 1118
Score = 309 bits (792), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 176/462 (38%), Positives = 256/462 (55%), Gaps = 13/462 (2%)
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
E ID LIE+LL +C ++GA+LVF+ GWEDI+ R +L +P S+ ++ H
Sbjct: 403 ESIDFTLIEKLLCHVCEHGQEGAVLVFMTGWEDISALRRQLRTHPVLGHPSRVWLLACHG 462
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ +QK++F+RPP RKIIL+TNIAET+IT++DVVYV+D G+ KEKSYD N + L
Sbjct: 463 TMSPDEQKRIFERPPSRVRKIILATNIAETSITVEDVVYVVDIGKAKEKSYDVATNTACL 522
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
W+SK+S +QR GRAGR + G+CYHLY + + D PEI R + +CL++K L
Sbjct: 523 LPRWISKSSVRQRKGRAGRLKPGVCYHLYPESVFQAFEDHNEPEILRTALHNVCLRIKGL 582
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
+I+ FL K ++PP + AI L+ IGAL E +T LG+ L L V P + KM
Sbjct: 583 QLG-DIQTFLAKAIEPPNRHAVHIAIEFLKVIGALDETEDLTVLGKHLAILPVEPQIGKM 641
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
L + CLDP LT+A A RDPF LP+ E KF + G SD LAV+
Sbjct: 642 LIMGCIFQCLDPMLTIAAALSSRDPFILPVDKREDSNQAKFKFSI----GEMSDHLAVVR 697
Query: 841 AFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNAR 900
AF W+ + + FC F+S V+ + MRKQ + L + G++ ++SC +
Sbjct: 698 AFNDWEVCMKHNTASEFCRANFLSMQVLIGMTSMRKQFLSLLQEAGYLDGGLASCEAYSS 757
Query: 901 VPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC-P 959
P I+ AV+ AGL+P VA + G +T G V +HPHS+N + + C P
Sbjct: 758 DPMIVRAVICAGLFPGVAAVVA--TPGSVTHKTMDGTVVHVHPHSVN----ARHEESCFP 811
Query: 960 LMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDN 1001
+V+ E + + +R+ T + LLL + P +
Sbjct: 812 WLVFLEKIK-TSNVFIRDSTGISDSMLLLFGGALVSIGQPGH 852
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 144/214 (67%), Gaps = 18/214 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQ 242
RSKLP + ++ QV++++G TGCGKTTQ+PQ++LE G +CKIVCTQ
Sbjct: 155 RSKLPAFQLRSAFLESLSRCQVLVVTGGTGCGKTTQLPQYILESEIDGGCGSSCKIVCTQ 214
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRISA+SVA R++ ERGE +G+++GY++R +S + +S++FCT G+LLR L+S V
Sbjct: 215 PRRISASSVALRVAEERGEVLGESVGYQVRFDSVRSRSTSLLFCTTGILLRRLMSDPV-- 272
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
++ +TH+IVDEIHER DF+L ++RD++ P L+LILMSAT+DA
Sbjct: 273 ------------LNGVTHVIVDEIHERGLNEDFLLIVLRDVIQRRPDLKLILMSATVDAK 320
Query: 363 RFSQYF--GGCPVIQVPGFTYPVKSFYLEDVLSI 394
F +YF + +PGF Y VKS+YLEDVL+I
Sbjct: 321 LFEKYFLDLNTRCMDIPGFAYTVKSYYLEDVLNI 354
>gi|308809405|ref|XP_003082012.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus
tauri]
gi|116060479|emb|CAL55815.1| mRNA splicing factor ATP-dependent RNA helicase (ISS), partial
[Ostreococcus tauri]
Length = 1680
Score = 309 bits (791), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 188/506 (37%), Positives = 277/506 (54%), Gaps = 55/506 (10%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
K L T++ E I+ L+E L+ I + E+GAIL+FLPG +I D+L AN D K
Sbjct: 720 KSLQTIDEEKINYELMESLVALIADEYEEGAILIFLPGMAEIRTLHDQLRAN--LEDVEK 777
Query: 593 -FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
F++IPLHS + S +Q+ F RPPPG RK++++TNIAET+ITI+DVV+VIDSGR++E Y
Sbjct: 778 RFLLIPLHSTLSSEEQRLTFSRPPPGVRKVVMATNIAETSITIEDVVFVIDSGRVRETQY 837
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS-QLRAASLPDFQVPEIKRIPI 710
DP +S L ++W SKAS++QR GRAGR + G C+H+YS + A L DF PEI R P+
Sbjct: 838 DPVTRMSALVTAWCSKASSRQRRGRAGRVREGYCFHMYSTKTEATVLEDFTTPEILRTPL 897
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
+ LCLQ+K+L +I FL ++PP I +A+ L ++ A+ +++T LG L
Sbjct: 898 DALCLQIKILGLG-DIRKFLSMAIEPPPEDAIASALKSLYELDAVDSKDELTALGHHLAE 956
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYG 830
L V + KM+ + + CLDP LT+A +R PF P+ +++ A AAK ++A+
Sbjct: 957 LPVDARLGKMMLYGAMFSCLDPVLTIAAGVGFRSPFMAPM--DKRDEADAAKRKIAA--- 1011
Query: 831 GQSDQLAVIAAFECW--KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
SD L ++ A+ W AK RG E + S+ F+S + + MR+Q L + GF+
Sbjct: 1012 DASDHLTLVRAYAGWVHARAKGRGFERDYLSKLFLSGQTLKQISEMRQQYTELLDQIGFL 1071
Query: 889 ----------PEDV------------------SSCSHNARVPGIIHAVLMAGLYPMVA-- 918
P V S S NA ++ AV+ AGLYP VA
Sbjct: 1072 RSGAGVLGDAPSPVLAPKITTKGRRHRLESALSEASVNAGNEALVRAVICAGLYPNVACA 1131
Query: 919 ---------RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRG 969
R R + + V T + V LHP S+ + L+ D P ++Y E R
Sbjct: 1132 SAQAKTDDSRARSRYPSSSVTVRTKHDSDVHLHPTSVCYGLN---RFDSPFLLYHEKVR- 1187
Query: 970 DGGMHVRNCTVVGPLPLLLLATEIAV 995
+++R+ T VG PLLL +I +
Sbjct: 1188 TTKVYLRDATAVGSYPLLLFGGKIKI 1213
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 150/242 (61%), Gaps = 21/242 (8%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAEI+ K+ L EK R + E R KLP S K V+ +++++ +ISG TGCGK
Sbjct: 421 KAEISRKLLELELAKEKSKEWRDMQEVRRKLPASELKSVVLESIEASSAAVISGATGCGK 480
Query: 218 TTQVPQFLLEHI--WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLES 275
TTQVPQF+ E KG I+ TQPRR+SA +VAER++ ER E IGD++GY IRLES
Sbjct: 481 TTQVPQFIFEEAIRAGKGGETNIIITQPRRLSAIAVAERVANERCERIGDSVGYSIRLES 540
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + ++FCT G+LLR RL+ N ++ ++H++VDE+HERD SDF
Sbjct: 541 RQSEKTRMLFCTTGILLR--------RLQTDPN------LTGVSHVVVDEVHERDLLSDF 586
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG-----CPVIQVPGFTYPVKSFYLED 390
+L I+R + L+ MSAT++A+ F YF G CPV+++PG T+PV + LED
Sbjct: 587 LLVILRSLTARRKDFHLVAMSATVNAELFKNYFEGHLHTTCPVVEIPGRTFPVTEYRLED 646
Query: 391 VL 392
+
Sbjct: 647 AI 648
>gi|300681522|emb|CBH32617.1| ATP binding protein, putative, expressed [Triticum aestivum]
Length = 1072
Score = 308 bits (789), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 284/486 (58%), Gaps = 18/486 (3%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + + + D++K L Y L+ NP+ I LIE +L IC DGA+LVF
Sbjct: 387 KSQIASVVEDAVKAADLRDYSPQTRDSLSCWNPDSIGFNLIENVLCHICQKERDGAVLVF 446
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DIN +D+L +NP D SK +++ H + S +QK +F +P PG RKI+L+TN+
Sbjct: 447 MTGWDDINTLKDQLQSNPLLGDPSKVLLLACHGSMASSEQKLIFDKPEPGVRKIVLATNL 506
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET+ITI+DVV+V+D G+ KE SYD NN L +W+SKASA+QR GRAGR Q+G C+H
Sbjct: 507 AETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASARQRRGRAGRVQSGECFH 566
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY Q D+Q+PE+ R P++ LCLQ+K L +I +FL + L P S++++NAI
Sbjct: 567 LYPQCVYNVFADYQLPELLRTPLQSLCLQIKSLRLG-SISEFLSRALQSPESLSVQNAIE 625
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGA +E++T LG+ L L V P + KML F + +CLDP LT+ RDPF
Sbjct: 626 YLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIFNCLDPILTIVAGLSVRDPFM 685
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
P ++K A +AK + + SD LA++ A++ W++A++ +C + F+S+
Sbjct: 686 TPF--DKKDLAESAKLQFSC--RDYSDHLAIVRAYDGWRDAERDRNGYDYCWRNFLSAQT 741
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNG 927
+ L +R+Q L G I E+++ C+ +R ++ A++ AGLYP V+ + K+
Sbjct: 742 LKALDSLRRQFLFLLKDTGLIDENMTMCNKWSRDENLVRAIICAGLYPGVSSVVNKEKSV 801
Query: 928 RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
++T +V L+ S+N K + P +V++E + + + +R+ T + LL
Sbjct: 802 S--LKTMEDGQVMLYSSSVNGK---EAKIPFPWLVFNEKVKVN-SVFLRDSTAISDSILL 855
Query: 988 LLATEI 993
L I
Sbjct: 856 LFGGNI 861
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 153/216 (70%), Gaps = 16/216 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKI 238
++E R LP + + + NQVV++SGETGCGKTTQ+PQ++LE ++G TC I
Sbjct: 155 MMEFRRSLPAQKERQSLLEAISQNQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSI 214
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SV+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 215 ICTQPRRISAISVSERVAAERGEKIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL-- 272
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
V R + +TH+IVDEIHER DF+L +++D+LP P LRL+LMSAT
Sbjct: 273 -VDR-----------SLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMSAT 320
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+A+ FS YFGG P+I +PGFTYPV+S +LED+L +
Sbjct: 321 LNAEMFSSYFGGAPMIHIPGFTYPVRSRFLEDILEV 356
>gi|326509123|dbj|BAJ86954.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1247
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 283/486 (58%), Gaps = 18/486 (3%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + + + D++K L Y L+ NP+ I LIE +L IC DGA+LVF
Sbjct: 562 KSQIASVVEDAVKAADLRDYSPQTRDSLSCWNPDSIGFNLIENVLCHICQKERDGAVLVF 621
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DIN +D+L +NP D SK +++ H + S +QK +F +P PG RKI+L+TN+
Sbjct: 622 MTGWDDINTLKDQLQSNPLLGDPSKVLLLACHGSMASSEQKLIFDKPEPGVRKIVLATNL 681
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET+ITI+DVV+V+D G+ KE SYD NN L +W+SKASA+QR GRAGR Q+G C+H
Sbjct: 682 AETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASARQRRGRAGRVQSGECFH 741
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY Q D+Q+PE+ R P++ LCLQ+K L +I +FL + L P S++++NAI
Sbjct: 742 LYPQCVYNVFADYQLPELLRTPLQSLCLQIKSLRLG-SISEFLSRALQSPESLSVQNAIE 800
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGA +E++T LG+ L L V P + KML F + +CLDP LT+ RDPF
Sbjct: 801 YLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIFNCLDPILTIVAGLSVRDPFM 860
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
P ++K A +AK + + SD LA++ A++ W+ A++ +C + F+S+
Sbjct: 861 TPF--DKKDLAESAKLQFSC--RDYSDHLAIVRAYDGWREAERDRNGYDYCWRNFLSAQT 916
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNG 927
+ L +R+Q L G I E+++ C+ +R ++ A++ AGLYP V+ + +K
Sbjct: 917 LKALDSLRRQFLFLLKDTGLIDENMTMCNKWSRDENLVRAIICAGLYPGVSSV--VNKEK 974
Query: 928 RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
++T +V L+ S+N K + P +V++E + + + +R+ T + LL
Sbjct: 975 SVSLKTMEDGQVMLYSSSVNGK---EAKIPFPWLVFNEKVKVN-SVFLRDSTAISDSILL 1030
Query: 988 LLATEI 993
L I
Sbjct: 1031 LFGGNI 1036
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 153/216 (70%), Gaps = 16/216 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKI 238
++E R LP + + + NQVV++SGETGCGKTTQ+PQ++LE ++G TC I
Sbjct: 330 MMEFRRSLPAQKERQSLLEAISQNQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSI 389
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SV+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 390 ICTQPRRISAISVSERVAAERGEKIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL-- 447
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
V R + +TH+IVDEIHER DF+L +++D+LP P LRL+LMSAT
Sbjct: 448 -VDR-----------SLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMSAT 495
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+A+ FS YFGG P+I +PGFTYPV+S +LED+L I
Sbjct: 496 LNAEMFSSYFGGAPMIHIPGFTYPVRSRFLEDILEI 531
>gi|168048900|ref|XP_001776903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671759|gb|EDQ58306.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1152
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 259/466 (55%), Gaps = 66/466 (14%)
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
DGAIL FLPGW+ I RDRLL R + +I+PLHS +P+ +Q+ F R P G RK
Sbjct: 597 DGAILCFLPGWDTITIVRDRLLK---VRASRFMMIVPLHSQLPAGEQRAAFARAPFGMRK 653
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
++L+TNIAET++TIDDVVYV+DSG++KEK YD N++T++ W S+ASA+QR GRAGR
Sbjct: 654 VVLATNIAETSVTIDDVVYVVDSGKIKEKQYDVSRNLTTMRVQWTSQASARQRQGRAGRV 713
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK-LLDPNCNIED----------- 728
Q G C+ L++Q ++ + Q+PE++R+P+EELCLQ+K +L PN +E
Sbjct: 714 QPGFCFQLFTQTTFLNMLEHQIPEMQRVPLEELCLQIKAVLSPNTVVEKFEATGVNFSQE 773
Query: 729 -------------FLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
FL K + PP + ++ AI VL+ +GA+ E +T LG L L+VHP
Sbjct: 774 LEETRAETTRIATFLSKAIQPPTASSVYAAIQVLKQLGAVDEFENLTPLGRILAKLTVHP 833
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
KML + L+ CLDP LT+A A+ +RDPF P++ E+ A F YG SDQ
Sbjct: 834 RFGKMLVYGALLGCLDPLLTVAAAACFRDPFVSPLNRREEADQVRASFGTGVAYG--SDQ 891
Query: 836 LAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS- 894
LA++ AF+ WK A FC F++ M ++ GMR Q + L+++G V S
Sbjct: 892 LALVNAFQQWKAADFNNHGYSFCEDNFLAFMTMTLIAGMRTQFERTLLESGLCEPYVQSP 951
Query: 895 ----CSHNARVPGIIHAVLMAGLYPMVAR---------LRPPHKNGRRFVETAGG--AKV 939
+H AR ++L+AGLYP + R ++ K+ R+ G +V
Sbjct: 952 NPVVSAHLAR------SLLVAGLYPNIVRSELCRESKGMKNATKHAYRWRLGFCGVNGRV 1005
Query: 940 RLHPHS------LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCT 979
LHP S LN LS+ +V+ E + + +R CT
Sbjct: 1006 FLHPTSVLSEKHLNSSLSY-------YLVFQEKLQ-TSQVFIRGCT 1043
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 212/423 (50%), Gaps = 79/423 (18%)
Query: 40 LASKDEVYTFDANLSNR---ERAVVHEVCKKM---GMTSKSSGRGKQRRVSVCKSKKRVE 93
L +K EV+ N+ ERA C K+ G+ K + +G + + +
Sbjct: 172 LRNKGEVFVAVGQGPNKAEAERACCTAACAKLYDVGLLQKPNDKGYSPPFTAVPASNKAA 231
Query: 94 TDKGKEILP---SLTFSEGSKL--VLQDL-FTHYPPDDGEPGEKLDANQSRKSDKTRGKR 147
++ + +P SL E S + LQ L F + + EP +A+ S + K
Sbjct: 232 HNQQQNEMPAIVSLRIEELSMMEDALQRLHFENVRLEKQEP----EASVSLQPRSFAHKS 287
Query: 148 VDI-FCKPKMSKAEIAMKVESLTSRIEKD-ANLRQIVEERSKLPISSFKDVITSTVDSNQ 205
DI K ++ +++E+ + + A R++ R LP + I V +++
Sbjct: 288 NDIPIPKEQLGTENAILRLEARKRSVSPEFAEQRRV---RQSLPAWRERQKIVGFVSNHR 344
Query: 206 VVLISGETGCGKTTQ---------------------------------VPQFLLE--HIW 230
VV+++GETGCGKTTQ VPQ++LE +
Sbjct: 345 VVVLTGETGCGKTTQICMHKPLGRNLAVILSDIMTFTLTGRAYSCASRVPQYVLEDAELQ 404
Query: 231 SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNG 289
G IV TQPRRI+A SVAER++ ERGE +G ++GY IRLES + SI++CT G
Sbjct: 405 GSGAEVHIVVTQPRRIAAISVAERVAWERGETLGKSVGYAIRLESSPPRPRGSILYCTTG 464
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
+LL RL+ A D + ++H+I+DE+HERD +DF+L +IR++L P
Sbjct: 465 ILLH--------RLQRA------DGLVGVSHVIIDEVHERDVDTDFLLVVIRELLNHSPT 510
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV--------LSILKSAESN 401
LR+++MSATLDA F++YFGGCP++ +PG T+PV+ + L+D+ L L+ A
Sbjct: 511 LRVVVMSATLDASIFTRYFGGCPLVNIPGMTHPVRVYNLDDLPQLMGRFHLPALRQAHGG 570
Query: 402 HLD 404
LD
Sbjct: 571 SLD 573
>gi|255086581|ref|XP_002509257.1| predicted protein [Micromonas sp. RCC299]
gi|226524535|gb|ACO70515.1| predicted protein [Micromonas sp. RCC299]
Length = 809
Score = 305 bits (781), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 180/501 (35%), Positives = 281/501 (56%), Gaps = 62/501 (12%)
Query: 536 ATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVI 595
ATV+ E I++ LIE L++ I + EDGAIL+FLPG +I +RL A+ +F++
Sbjct: 240 ATVDEEKINMELIEMLVQLIADEYEDGAILIFLPGMAEIRGLHERL-ASSLDDVEKRFIL 298
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
IPLHS + S +Q+ F +P PG RK++++TNIAET+ITIDDVV+VIDSGR++E YDP +
Sbjct: 299 IPLHSTLSSEEQRLTFSKPLPGVRKVVMATNIAETSITIDDVVFVIDSGRVRETQYDPTS 358
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
+S+L ++W S+AS++QR GRAGR + G C+HLYS R + L DF PEI R P++ LCL
Sbjct: 359 RMSSLVTAWCSRASSRQRRGRAGRVREGYCFHLYSSARESKLADFTTPEILRTPLDALCL 418
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
Q+K+L ++ +FL + ++PP I +A+ L ++ A+ +++T LG L L V
Sbjct: 419 QIKILRLG-DVREFLAQAIEPPPEGAIASALRSLAELDAIDASDELTPLGHHLAELPVDA 477
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
+ KM+ + + CLDP LT+A +R PF P+ +++ A AK ++A G SD
Sbjct: 478 RLGKMMLYGAMFSCLDPVLTIAAGVGFRSPFVSPM--DKRDEADEAKRKIAG-AGATSDH 534
Query: 836 LAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----- 888
L ++ A+ W AK RG+ E F ++ F+S+ + + MR+Q L + GF+
Sbjct: 535 LTLVRAYAGWIRAKARGRGFERDFLAKTFLSAQTLRQISEMRQQYVELLDQIGFLRSGTG 594
Query: 889 -----------PEDV-----------------------SSCSHNARVPGIIHAVLMAGLY 914
PE ++ S NA ++ AV+ AGL+
Sbjct: 595 LLGGKKDEDDGPEQTPRGGNARGVKRGGGFKASAERALAAASVNAGNEPLVRAVICAGLF 654
Query: 915 PMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH 974
P VA V +G LHP S+ F LS K + L+ ++++ ++
Sbjct: 655 PNVA------------VVESGDGDAYLHPTSVVFGLS--KFEHRFLLFHEKVKTAK--VY 698
Query: 975 VRNCTVVGPLPLLLLATEIAV 995
+R+ T++GP PLLL ++AV
Sbjct: 699 IRDATMIGPYPLLLFGGKVAV 719
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 127/203 (62%), Gaps = 21/203 (10%)
Query: 197 ITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCTQPRRISATSVAER 254
+ +++ + ++SG TGCGKTTQVPQ++ E+ +G C ++ TQPRR+SA +VAER
Sbjct: 5 VLECIENGRASVVSGATGCGKTTQVPQYVFENAVRAGRGGECSVIITQPRRLSAIAVAER 64
Query: 255 ISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
++ ER E IGD +GY IRLES+ ++ ++FCT G+LLR L S D
Sbjct: 65 VAQERCERIGDTVGYSIRLESRQSSNTRLLFCTTGILLRRLQSD--------------PD 110
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF-----G 369
+ ++H+IVDE+HERD SDF+L I+R + RL+ MSAT++A+ F YF G
Sbjct: 111 LRGVSHVIVDEVHERDLLSDFLLVILRRLAARREDFRLVAMSATVNAELFKGYFERVVPG 170
Query: 370 GCPVIQVPGFTYPVKSFYLEDVL 392
C +++PG T+PV + LED +
Sbjct: 171 ECGCVEIPGRTFPVAEYRLEDAI 193
>gi|356533151|ref|XP_003535131.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 1093
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/487 (35%), Positives = 281/487 (57%), Gaps = 19/487 (3%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + +++ D+++ L Y L+ P+ I LI+ +L IC GAILVF
Sbjct: 428 KSQIASSVEDALRAADLSDYSLQTRESLSCWYPDCIGFNLIQYILCNICEHERPGAILVF 487
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DIN +++LL +P D S+ +++ HS + S++Q+ +F+ P G RKI+L+TNI
Sbjct: 488 MIGWDDINALKEKLLTHPVLSDPSRVLLLMCHSSMDSLEQRLIFEEPEDGVRKIVLATNI 547
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET+ITI+D+V+V+D G+ K+ SYD NN L +W+SK S +QR GRAGR Q G CYH
Sbjct: 548 AETSITINDIVFVLDCGKAKKSSYDALNNTPCLLPTWISKVSVQQRRGRAGRVQPGECYH 607
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY + S + Q+PEI R+P++ LCLQ+K L +I +FL + L P + ++ AI
Sbjct: 608 LYPRCVYDSFAEHQLPEILRMPLQSLCLQIKSLKLG-SISEFLSRALQSPEILAVQKAIE 666
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGAL +E +T LG L L + P + KML F ++ +CLDP LT+ RDPF
Sbjct: 667 YLKTIGALDENENLTILGHNLTMLPMEPKLGKMLIFGVIFNCLDPILTIVAGLSVRDPFL 726
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
P+ ++K A AAK + + Y SD LA++ A+E WK+A++ +C + F+S+
Sbjct: 727 TPL--DKKDLAEAAKSQFSQDY---SDHLAIVRAYEGWKDAEKDLNGHEYCWKNFLSAQS 781
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNG 927
M ++ +R + + L G + + SSC+ + +I A + GLYP + + HK+
Sbjct: 782 MRVIDALRMEFLSLLKDIGLVDSNTSSCNAWSYDMYLIRAAVCYGLYPGICSV--VHKDT 839
Query: 928 RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
++T +V LH +S+N + + P +V++E + + + +R+ T V +L
Sbjct: 840 SFSLKTMEDGQVLLHSNSVNAR---ETRIPYPWVVFNEKIKVN-SVFLRDSTAVPDSVVL 895
Query: 988 LLATEIA 994
LL I+
Sbjct: 896 LLGGSIS 902
Score = 229 bits (585), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 153/218 (70%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETC 236
R I+E RS LP K+ I S + NQV++ISGETGCGKTTQ+PQF+LE I S +G C
Sbjct: 194 RTILEFRSSLPAYKEKEAILSAILRNQVLIISGETGCGKTTQLPQFILESEIESVRGAVC 253
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRI+A SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 254 NIICTQPRRIAAISVSERVAFERGEKLGESVGYKVRLEGMRGRDTHLLFCTTGILLRRLL 313
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
++ +THIIVDEIHER DF+L +++D+L P L+LILMS
Sbjct: 314 DD--------------RNLIGVTHIIVDEIHERGMNEDFLLIVLKDLLARRPELKLILMS 359
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATLDA+ FS YF G +++PGFTYPV++ +LED+L +
Sbjct: 360 ATLDAELFSSYFNGAATMKIPGFTYPVRTQFLEDILEM 397
>gi|53791439|dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica
Group]
Length = 1063
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/459 (38%), Positives = 271/459 (59%), Gaps = 11/459 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ I LIE +L IC GA+LVF+ GW+DIN +++L ANP D SK +
Sbjct: 414 LSCWNPDSIGFNLIENVLCHICQKERAGAVLVFMTGWDDINALKEQLQANPLLGDPSKVL 473
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +QK +F RP PG RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD
Sbjct: 474 LLACHGSMASSEQKLIFDRPEPGVRKIVLATNLAETSITINDVVFVVDCGKAKETSYDAL 533
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L +W+SKASA+QR GRAGR Q G CYHLY Q + D+Q+PE+ R P++ LC
Sbjct: 534 NNTPCLLPTWISKASARQRRGRAGRVQPGECYHLYPQCVYEAFADYQLPELLRTPLQSLC 593
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L P S+++ NAI L+ IGA +E++T LG+ L L V
Sbjct: 594 LQIKSLRLG-SISEFLSRALQSPESLSVENAIEYLKVIGAFDRNEELTILGKHLSMLPVE 652
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML F + +CLDP LT+ RDPF P ++K A +AK + + SD
Sbjct: 653 PKLGKMLIFGAIFNCLDPILTIVSGLSVRDPFLTPF--DKKDLAESAKLQFSC--RDYSD 708
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A+E W+ A++ +C + F+S + + +R+Q L G + E++++
Sbjct: 709 HLALVRAYEGWREAERDRNGYDYCWKNFLSVQTLKAIDSLRRQFLFLLRDTGLVDENMTA 768
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
C+ +R ++ AV+ AGLYP V+ + K+ ++T +V L+ S+N K +
Sbjct: 769 CNKWSRDENLVRAVICAGLYPGVSSVVNKEKSIS--LKTMEDGQVMLYSSSVNGK---ET 823
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
P +V++E + + + +R+ T + LLL I
Sbjct: 824 KIPFPWLVFNEKVKVN-SVFLRDSTAISDSILLLFGGNI 861
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 154/216 (71%), Gaps = 16/216 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKI 238
++E R LP + + + NQVV++SGETGCGKTTQ+PQ++LE ++G TC I
Sbjct: 155 MMEFRRSLPAYKERQTLLEAIAQNQVVVVSGETGCGKTTQLPQYILESEIDAARGATCSI 214
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA +V+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 215 ICTQPRRISAIAVSERVAAERGEKIGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLL-- 272
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRL+LMSAT
Sbjct: 273 -VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMSAT 320
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+A+ FS YFGG P+I +PGFTYPV+S +LED+L I
Sbjct: 321 LNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEI 356
>gi|357131922|ref|XP_003567582.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Brachypodium distachyon]
Length = 1247
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/502 (36%), Positives = 290/502 (57%), Gaps = 21/502 (4%)
Query: 502 GEQENQPEVAQIIKK---HMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQL 551
G++++ Q I+K + + + D++K L Y L+ NP+ I LIE +
Sbjct: 553 GQEKSWKMQKQAIRKRKSQIASVVEDAVKAADLRDYSSRTRDSLSCWNPDSIGFNLIENV 612
Query: 552 LRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVF 611
L IC DGA+LVF+ GW+DIN +++L ANP D +K +++ H +PS +QK +F
Sbjct: 613 LCHICQKERDGAVLVFMTGWDDINALKEQLQANPLLGDPNKVLLLACHGSMPSSEQKLIF 672
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
++P G RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD NN L +W+SKASA+
Sbjct: 673 EKPEAGLRKIVLATNLAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASAR 732
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ 731
QR GRAGR Q+G C+HLY Q + D+Q+PE+ R P++ LCLQ+K L +I +FL
Sbjct: 733 QRRGRAGRVQSGECFHLYPQCVYNAFADYQLPELLRTPLQSLCLQIKSLRLG-SISEFLS 791
Query: 732 KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLD 791
+ L P S++++NAI L+ IGA +E++T LG L L V P + KML + +CLD
Sbjct: 792 RALQSPESLSVQNAIEYLKVIGAFDQNEELTVLGRHLSMLPVEPKLGKMLILGAIFNCLD 851
Query: 792 PALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR 851
P LT+ RDPF P ++K A +AK + + SD LA++ A+E W+ A++
Sbjct: 852 PILTIVSGLSVRDPFMTPF--DKKDLAESAKLQFSC--RDYSDHLALVRAYEGWREAERD 907
Query: 852 GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMA 911
+C + F+S + L +R+Q L G I E+++ C+ +R ++ AV+ A
Sbjct: 908 RNGYDYCWKNFLSVQTLKALDSLRRQFVFLLKDTGLIDENMTRCNKWSRDENLVRAVICA 967
Query: 912 GLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
GLYP V+ + +K ++T +V L+ S+N K + P +V++E + +
Sbjct: 968 GLYPGVSSV--VNKEKSISLKTMEDGQVMLYSSSVNGK---EAKIPFPWLVFNEKVKVN- 1021
Query: 972 GMHVRNCTVVGPLPLLLLATEI 993
+ +R+ T + LLL I
Sbjct: 1022 SVFLRDSTAISDSILLLFGGNI 1043
Score = 236 bits (602), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 153/216 (70%), Gaps = 16/216 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKI 238
++E R LP + + + NQVV++SGETGCGKTTQ+PQ++LE ++G TC +
Sbjct: 337 MMEFRRSLPAYKERQSLLDAISRNQVVVVSGETGCGKTTQLPQYILESEIDAARGATCSV 396
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA +V+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 397 ICTQPRRISAITVSERVAAERGEKIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL-- 454
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
V R + +TH+IVDEIHER DF+L +++D+LP P LRL+LMSAT
Sbjct: 455 -VDR-----------SLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMSAT 502
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+AD FS YFGG P+I +PGFTYPV+S +LED+L +
Sbjct: 503 LNADLFSSYFGGAPMIHIPGFTYPVRSRFLEDILEV 538
>gi|297840689|ref|XP_002888226.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297334067|gb|EFH64485.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 1458
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 195/529 (36%), Positives = 281/529 (53%), Gaps = 71/529 (13%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N+ SD +Q L +N + ID L+E+L+ I E+GAIL+FLPG +I D
Sbjct: 878 NSYSDQTQQNL-----KRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVSEIYMLLD 932
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
R+ A+ FR + ++PLHS + S +Q+KVF RPP G RK+I +TNIAET+ITIDDVVY
Sbjct: 933 RIAASYRFRGPAADWLLPLHSSIASTEQRKVFLRPPKGIRKVIAATNIAETSITIDDVVY 992
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VIDSG+ KE Y+P +S++ W+S+A+A+QR GRAGR + GIC+ LY++ R L
Sbjct: 993 VIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMR 1052
Query: 700 -FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
+QVPE+ R+P+ ELCLQ+KLL +I+ FL K L+PP + +AI +L ++GA+ D
Sbjct: 1053 PYQVPEMLRMPLVELCLQIKLLGLG-HIKPFLSKALEPPSEGAMTSAISLLHEVGAVEGD 1111
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
E++T LG L L V L+ KML + + CL P L++A Y+ PF P +EK+
Sbjct: 1112 EELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYP--KDEKQNV 1169
Query: 819 TAAKFELASLYGG----------QSDQLAVIAAFECW-KNAKQRGQEAW--FCSQYFVSS 865
K L S G QSD L ++ A++ W K ++RG A FC F+SS
Sbjct: 1170 DRVKLALLSDNLGSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMNAAQRFCESKFLSS 1229
Query: 866 GVMNMLLGMRKQLQTELIKNGFI--------------------PEDVSSCSHNARVPGII 905
VM M+ MR Q T L G I + + ++ P ++
Sbjct: 1230 SVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQPEVV 1289
Query: 906 HAVLMAGLYPMVARLRPPHKNGRRFVETA-------------------GGAKVRLHPHSL 946
A+L AGLYP +A N + ETA G +V +HP S+
Sbjct: 1290 KAILCAGLYPNIA------ANDKGITETAFNSLTKQGNQTKSYSAWYDGRREVHIHPSSI 1343
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
N K P +V+ E + +++R+ TVV P +LL I V
Sbjct: 1344 NSNF---KAFQYPFLVFLEKVETN-KVYLRDTTVVSPFSILLFGGSINV 1388
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 141/225 (62%), Gaps = 26/225 (11%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TC 236
+ +++ R+ LPIS K+ I + V+++ GETG GKTTQVPQF+L+ + G C
Sbjct: 604 KDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYC 663
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDN----IGYKIRLESKGGKHSSIVFCTNGVLL 292
I+CTQPRRI+A SVA+R++ ER E+ + +GY++RLES + ++FCT G+LL
Sbjct: 664 NIICTQPRRIAAISVAQRVADERCESSPGSDDSLVGYQVRLESARSDKTRLLFCTTGILL 723
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP------S 346
R L A +K D +THIIVDE+HER DF+L I++ ++ +
Sbjct: 724 RKL----------AGDKTLND----VTHIIVDEVHERSLLGDFLLIILKTLIEKQSCDNT 769
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
L++ILMSAT+DAD FS+YFG CPVI G T+PV + +LE++
Sbjct: 770 SRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEI 814
>gi|255546785|ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1129
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 279/499 (55%), Gaps = 12/499 (2%)
Query: 496 RTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKI 555
+T QL ++ + ++A +++ + + +S + D LA P+ I LIE +L I
Sbjct: 447 KTQRQLAPRKRKNQIATLVEDALNKSSFESYSSRARDS-LACWMPDCIGFNLIEAVLCHI 505
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
C G +LVF+ GWEDI+ RD+L A+P D ++ +++ H + + +QK +F+RPP
Sbjct: 506 CRKERPGGVLVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLTCHGSMATSEQKLIFERPP 565
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAG 675
RKI+L+TN+AE +ITI+D+V+V+D G+ KE +YD NN L SW+S+ASA QR G
Sbjct: 566 SNVRKIVLATNMAEASITINDMVFVVDCGKAKETTYDALNNTPCLLPSWISQASACQRRG 625
Query: 676 RAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLD 735
RAGR Q G CYHLY + + ++Q+PE+ R P+ LCLQ+K L +I +FL L
Sbjct: 626 RAGRVQPGECYHLYPKCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVE-SIAEFLSAALQ 684
Query: 736 PPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALT 795
PP + ++NAI L+ IGAL E +T LG+ L L V P + KML + C DP LT
Sbjct: 685 PPEPLAVQNAIGFLKMIGALDEKENLTNLGKFLSILPVDPKLGKMLIMGAIFRCFDPVLT 744
Query: 796 LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
+ RDPF LP +K A AK ++ SD +A++ A+E WK+A++ G
Sbjct: 745 IVSGLSVRDPFLLP--QEKKDLAGTAKSRFSA--KDYSDHMALVRAYEGWKDAEREGSAY 800
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYP 915
+C + F+S+ + + +RKQ L + G + D + + + ++ A++ +GLYP
Sbjct: 801 EYCWRNFLSAQTLQAIHSLRKQFSFILKEAGLVDADAGANNRLSHNQSLVRAIICSGLYP 860
Query: 916 MVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
+A + H+ +T +V L+ +S+N + +T P +V+ E + + + +
Sbjct: 861 GIASV--VHRETSMSFKTMDDGQVLLYANSVNARY---QTIPYPWLVFGEKVKVN-TVFI 914
Query: 976 RNCTVVGPLPLLLLATEIA 994
R+ T V L+L ++
Sbjct: 915 RDSTGVSDSILILFGGALS 933
Score = 229 bits (583), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 153/218 (70%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETC 236
R+I++ R LP K+ + + NQV+++SGETGCGKTTQ+P ++LE I S +G C
Sbjct: 223 RKIMDFRKSLPAFKEKEKLLQAIARNQVIVVSGETGCGKTTQLPHYILESEIESGRGAFC 282
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA +VA+R+S ERGE +G+ +GYK+RLE GK + ++FCT+G+LLR L+
Sbjct: 283 SIICTQPRRISAMAVADRVSAERGEPLGETVGYKVRLEGMKGKDTHLLFCTSGILLRRLL 342
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
S +++ +TH+ VDEIHER DF+L +++D+LP LRLILMS
Sbjct: 343 SD--------------RNLTGITHVFVDEIHERGMNEDFLLIVLKDLLPRRQDLRLILMS 388
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATL+A+ FS YFGG P I +PGFTYPV++ +LEDVL +
Sbjct: 389 ATLNAELFSNYFGGAPKIHIPGFTYPVRAHFLEDVLEM 426
>gi|222617638|gb|EEE53770.1| hypothetical protein OsJ_00159 [Oryza sativa Japonica Group]
Length = 1700
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 281/486 (57%), Gaps = 18/486 (3%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + + + D+++ L Y L+ NP+ I LIE +L IC GA+LVF
Sbjct: 1024 KSQIASVVEDTVQAADLRDYSARTRDSLSCWNPDSIGFNLIENVLCHICQKERAGAVLVF 1083
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DIN +++L ANP D SK +++ H + S +QK +F RP PG RKI+L+TN+
Sbjct: 1084 MTGWDDINALKEQLQANPLLGDPSKVLLLACHGSMASSEQKLIFDRPEPGVRKIVLATNL 1143
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET+ITI+DVV+V+D G+ KE SYD NN L +W+SKASA+QR GRAGR Q G CYH
Sbjct: 1144 AETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASARQRRGRAGRVQPGECYH 1203
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY Q + D+Q+PE+ R P++ LCLQ+K L +I +FL + L P S+++ NAI
Sbjct: 1204 LYPQCVYEAFADYQLPELLRTPLQSLCLQIKSLRLG-SISEFLSRALQSPESLSVENAIE 1262
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGA +E++T LG+ L L V P + KML F + +CLDP LT+ RDPF
Sbjct: 1263 YLKVIGAFDRNEELTILGKHLSMLPVEPKLGKMLIFGAIFNCLDPILTIVSGLSVRDPFL 1322
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
P ++K A +AK + + SD LA++ A+E W+ A++ +C + F+S
Sbjct: 1323 TPF--DKKDLAESAKLQFSCR--DYSDHLALVRAYEGWREAERDRNGYDYCWKNFLSVQT 1378
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNG 927
+ + +R+Q L G + E++++C+ +R ++ AV+ AGLYP V+ + +K
Sbjct: 1379 LKAIDSLRRQFLFLLRDTGLVDENMTACNKWSRDENLVRAVICAGLYPGVSSV--VNKEK 1436
Query: 928 RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
++T +V L+ S+N K + P +V++E + + + +R+ T + LL
Sbjct: 1437 SISLKTMEDGQVMLYSSSVNGK---ETKIPFPWLVFNEKVKVN-SVFLRDSTAISDSILL 1492
Query: 988 LLATEI 993
L I
Sbjct: 1493 LFGGNI 1498
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 155/218 (71%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETC 236
+ ++E R LP + + + NQVV++SGETGCGKTTQ+PQ++LE ++G TC
Sbjct: 790 QSMMEFRRSLPAYKERQTLLEAIAQNQVVVVSGETGCGKTTQLPQYILESEIDAARGATC 849
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA +V+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 850 SIICTQPRRISAIAVSERVAAERGEKIGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLL 909
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRL+LMS
Sbjct: 910 ---VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMS 955
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATL+A+ FS YFGG P+I +PGFTYPV+S +LED+L I
Sbjct: 956 ATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEI 993
>gi|218187401|gb|EEC69828.1| hypothetical protein OsI_00149 [Oryza sativa Indica Group]
Length = 1680
Score = 304 bits (778), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 281/486 (57%), Gaps = 18/486 (3%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + + + D+++ L Y L+ NP+ I LIE +L IC GA+LVF
Sbjct: 1004 KSQIASVVEDTVQAADLRDYSARTRDSLSCWNPDSIGFNLIENVLCHICQKERAGAVLVF 1063
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DIN +++L ANP D SK +++ H + S +QK +F RP PG RKI+L+TN+
Sbjct: 1064 MTGWDDINALKEQLQANPLLGDPSKVLLLACHGSMASSEQKLIFDRPEPGVRKIVLATNL 1123
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET+ITI+DVV+V+D G+ KE SYD NN L +W+SKASA+QR GRAGR Q G CYH
Sbjct: 1124 AETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASARQRRGRAGRVQPGECYH 1183
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY Q + D+Q+PE+ R P++ LCLQ+K L +I +FL + L P S+++ NAI
Sbjct: 1184 LYPQCVYEAFADYQLPELLRTPLQSLCLQIKSLRLG-SISEFLSRALQSPESLSVENAIE 1242
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGA +E++T LG+ L L V P + KML F + +CLDP LT+ RDPF
Sbjct: 1243 YLKVIGAFDRNEELTILGKHLSMLPVEPKLGKMLIFGAIFNCLDPILTIVSGLSVRDPFL 1302
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
P ++K A +AK + + SD LA++ A+E W+ A++ +C + F+S
Sbjct: 1303 TPF--DKKDLAESAKLQFSC--RDYSDHLALVRAYEGWREAERDRNGYDYCWKNFLSVQT 1358
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNG 927
+ + +R+Q L G + E++++C+ +R ++ AV+ AGLYP V+ + +K
Sbjct: 1359 LKAIDSLRRQFLFLLRDTGLVDENMTACNKWSRDENLVRAVICAGLYPGVSSV--VNKEK 1416
Query: 928 RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
++T +V L+ S+N K + P +V++E + + + +R+ T + LL
Sbjct: 1417 SISLKTMEDGQVMLYSSSVNGK---ETKIPFPWLVFNEKVKVN-SVFLRDSTAISDSILL 1472
Query: 988 LLATEI 993
L I
Sbjct: 1473 LFGGNI 1478
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 154/216 (71%), Gaps = 16/216 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKI 238
++E R LP + + + NQVV++SGETGCGKTTQ+PQ++LE ++G TC I
Sbjct: 772 MMEFRRSLPAYKERQTLLEAIAQNQVVVVSGETGCGKTTQLPQYILESEIDAARGATCSI 831
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA +V+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 832 ICTQPRRISAIAVSERVAAERGEKIGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLL-- 889
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRL+LMSAT
Sbjct: 890 -VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMSAT 937
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+A+ FS YFGG P+I +PGFTYPV+S +LED+L I
Sbjct: 938 LNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEI 973
>gi|432942211|ref|XP_004082987.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Oryzias
latipes]
Length = 1407
Score = 303 bits (777), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 180/505 (35%), Positives = 281/505 (55%), Gaps = 57/505 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF-- 587
K +A ++ + I++ L+E LL I + GA+LVFLPG +I ++L +N F
Sbjct: 836 KTIAAMDLDKINMDLVESLLEWIVDGKHNYPPGAVLVFLPGLAEIKMLYEQLQSNRMFNN 895
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
R S+ V+ PLHS + + +Q+ VF RPP G KII+STNIAET++TIDDVVYVIDSG+MK
Sbjct: 896 RGASRCVVYPLHSTLSNDEQQAVFSRPPEGVTKIIISTNIAETSVTIDDVVYVIDSGKMK 955
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIK 706
EK YD ++ +L+ +WVS+A+A QR GRAGR +G+C+HL+ S L + Q+PEI+
Sbjct: 956 EKRYDAAKSMESLEDTWVSRANALQRKGRAGRVASGVCFHLFTSHCFRHLLAEQQLPEIQ 1015
Query: 707 RIPIEELCLQVKLLDPNCN--IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E+LCL+VK+LD + +E + ++PP + ++ A + LQD+GAL+ +E +T L
Sbjct: 1016 RVPLEQLCLRVKVLDLFADQLLESVFSRLIEPPAAESLDAARLRLQDLGALTTEEMLTPL 1075
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L CL V + K++ F + CLDPALT+A + ++ PF P E+ F
Sbjct: 1076 GYHLACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFA 1135
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF--CSQYFVSSGVMNMLLGMRKQLQTEL 882
+A+ SD LA++ A+ W+ A + +A F C + F+S V+ + +++Q L
Sbjct: 1136 VAN-----SDHLALLQAYNGWRGAAKNSNKAGFLYCRENFLSWRVLQEIASLKRQFAELL 1190
Query: 883 IKNGFIPEDV---------------------SSCSHNARVPGIIHAVLMAGLYPMVARLR 921
GFI E + S + N+ ++ A+L A LYP V ++R
Sbjct: 1191 SDIGFIKEGLRARVIERMSSQGADGVLEATGSEANLNSENIRLMSAMLCAALYPNVVQVR 1250
Query: 922 PPHKNGR----------------RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDE 965
P N + RF G V +HP S+N+ + + D P +VY E
Sbjct: 1251 APQGNFKMTSTGAMKMHPKANELRFATKKDGY-VNVHPSSVNYTV---RHYDSPYLVYHE 1306
Query: 966 ITRGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+LL
Sbjct: 1307 KVK-TSRVFIRDCSMVSVYPLVLLG 1330
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 145/225 (64%), Gaps = 16/225 (7%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R + + ++E R LP +D I ++ +QV+++SG TGCGKTTQ+PQF+L+
Sbjct: 544 RKQSSRRFKAMLEHRKNLPAWQERDNILEELNRSQVLVVSGMTGCGKTTQIPQFILDASL 603
Query: 231 --SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTN 288
S IVCTQPRRISA +VA+R++ ER E++G ++GY+IRLES + +++CT
Sbjct: 604 EGSAERVANIVCTQPRRISAITVAQRVAQERAESLGLSVGYQIRLESVKSSATRLLYCTA 663
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP 348
G+LLR L D+ ++H+IVDE+HER SDF+L +++D++ P
Sbjct: 664 GLLLRRLEGDA--------------DLKGVSHVIVDEVHERTEESDFLLLVLKDLITKRP 709
Query: 349 HLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
L+++LMSATL+A+ FSQYF CP + +PG T+PV F+LED ++
Sbjct: 710 DLKIVLMSATLNANLFSQYFYDCPTVHIPGRTFPVDQFFLEDAIA 754
>gi|357521527|ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
gi|355525074|gb|AET05528.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
Length = 1214
Score = 303 bits (776), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/460 (36%), Positives = 272/460 (59%), Gaps = 11/460 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ NP+ I LIE +L I + GA LVF+ GW+DIN +D+L A+P D S+ +
Sbjct: 569 MSCWNPDSIGFNLIEHVLCHIVKNERPGAALVFMTGWDDINSLKDKLHAHPLLGDQSRVL 628
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +QK +F+ P G RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD
Sbjct: 629 LLACHGSMSSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDAL 688
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SKA+A+QR GRAGR Q+G CYHLY + + D+Q+PE+ R P++ LC
Sbjct: 689 NNTPCLLPSWISKAAARQRKGRAGRVQSGECYHLYPRCVYDAFADYQLPELLRTPLQSLC 748
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL L PP ++++NA+ L+ IGAL +E +T LG KL L V
Sbjct: 749 LQIKSLQLG-SISEFLSSALQPPEPLSVQNAVDYLKIIGALDENENLTVLGCKLSMLPVE 807
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP LT+ RDPF +P ++K A +AK ++A+ G SD
Sbjct: 808 PKLGKMLILGAIFNCLDPILTVVAGLSVRDPFVVP--ADKKDLAESAKAQIAA--RGYSD 863
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A++ WK+A+ + FC + F+SS + + +RKQ L G + + +
Sbjct: 864 HLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLVGNNSET 923
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
+ + ++ AV+ AGL+P ++ + K+ ++T +V L+ +S+N ++
Sbjct: 924 NNKWSNEEHLLRAVICAGLFPGISSVVNKEKSIS--LKTMEDGQVLLYANSVNGSVA--- 978
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V++E + + + +R+ T + LLL I+
Sbjct: 979 KIPYPWIVFNEKIKVN-TVFLRDSTGISDSMLLLFGGNIS 1017
Score = 229 bits (583), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 151/216 (69%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
++++E R LP KD V NQV+++SGETGCGKTTQ+PQ++LE ++G C
Sbjct: 306 QKMLEFRRSLPAFKEKDAFLKVVSENQVIVVSGETGCGKTTQLPQYILESEIEAARGSLC 365
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 366 NIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL 425
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R + +TH+IVDEIHER DF+L +++D+LP P LRLILMS
Sbjct: 426 ---VDR-----------SLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLILMS 471
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+A+ FS YF G P I +PGFT+PV++ +LED+L
Sbjct: 472 ATLNAELFSSYFDGAPTIHIPGFTFPVRAQFLEDIL 507
>gi|395508183|ref|XP_003758393.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sarcophilus
harrisii]
Length = 1373
Score = 303 bits (775), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 311/563 (55%), Gaps = 77/563 (13%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNP---------- 540
KA+ RTA + E++ + + + + +++++ D QQL K LA P
Sbjct: 748 KARRNRTAFEEVEEDLRRSLHFLDESSVKDSVPD---QQLNFKQLAARYPGFNKSVIKTM 804
Query: 541 -----ELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDT 590
E ++L LIE LL I + GA+LVFLPG +I ++L +NP F R +
Sbjct: 805 SMMDLEKVNLELIEALLEWIVDGTHSYPPGAVLVFLPGLAEIKMLYEQLQSNPLFNNRRS 864
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK
Sbjct: 865 KRCIILPLHSSLSSEEQQLVFVKPPKGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKR 924
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIP 709
YDP + +L+ ++VS+A+A QR GRAGR +G+C+HL+S L Q+PEI+R+P
Sbjct: 925 YDPSKGMESLEDTFVSRANALQRKGRAGRIASGVCFHLFSSYHYNHQLLKQQLPEIQRVP 984
Query: 710 IEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+E+LCL++K+L+ + +++ + ++PP ++R + + LQD+GAL+ DEK+T LG
Sbjct: 985 LEQLCLRIKILEMFTDHSLQSVFSRLIEPPRIESLRTSKVRLQDLGALTPDEKLTPLGYH 1044
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V + K++ F + CLDPALT+A + ++ PF P E+ +F LA+
Sbjct: 1045 LASLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANQKKLEFALAN 1104
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
SD LA++ A++ W+ + G A +C + F+S V+ + +++Q TEL+ +
Sbjct: 1105 -----SDYLALLQAYKGWRLCIKEGARASYNYCRENFLSGRVLQEIASLKRQF-TELLSD 1158
Query: 886 -GFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVARLRPP 923
GF+ E + + + NA +I A+L A LYP V +++ P
Sbjct: 1159 IGFVKEGLRARDIEKRWAQGGDGVLDATGEEANSNAENIKLISAILCAALYPNVVQVKTP 1218
Query: 924 ----HKNGR------------RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
K R +FV T V +HP S+N+++ + D P +VY E
Sbjct: 1219 EGKYQKTSRGAVRMQLKVDELKFV-TKNDDYVHIHPSSVNYQM---RHFDSPYLVYHEKI 1274
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PLLL
Sbjct: 1275 K-TSRVFIRDCSMVSVYPLLLFG 1296
Score = 203 bits (516), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 147/218 (67%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-IWSKGE-TCKI 238
I++ER LP ++ I + +QV+++SG TGCGKTTQ+PQF+L+ ++ E I
Sbjct: 524 ILQERRSLPAWEERETILDLLSKHQVLVVSGMTGCGKTTQIPQFILDDTLYGPPEKVANI 583
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E IG +GY+IRLES + +++CT GVLLR L +
Sbjct: 584 ICTQPRRISAISVAERVAKERAEKIGFTVGYQIRLESIKSSATRLLYCTTGVLLRRL--E 641
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ LR++LMSAT
Sbjct: 642 GDTALQ------------GVTHIIVDEVHERTEESDFLLLVLKDVMLQNRDLRIVLMSAT 689
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L+A+ FS+YF CP+I +PG T+PV F+LED +++ K
Sbjct: 690 LNAELFSEYFNSCPIINIPGRTFPVDQFFLEDAIAMTK 727
>gi|297737748|emb|CBI26949.3| unnamed protein product [Vitis vinifera]
Length = 1181
Score = 303 bits (775), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 270/464 (58%), Gaps = 22/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ I LIE LL IC + GA+LVF+ GW+DI+ +D+L A+P D+ + +
Sbjct: 536 LSCWNPDCIGFNLIENLLCHICENECPGAVLVFMTGWDDISSLKDKLQAHPILGDSDQVL 595
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F P G RKI+L+TNIAET+ITI+DVV+V+D G+ KE SYD
Sbjct: 596 LLTCHGSMASAEQRLIFDEPRDGVRKIVLATNIAETSITINDVVFVVDCGKAKETSYDAL 655
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SK SA+QR GRAGR Q G CYHLY + + D+Q+PEI R P++ LC
Sbjct: 656 NNTPCLLPSWISKVSAQQRRGRAGRVQPGKCYHLYPRCVYDAFADYQLPEILRTPLQSLC 715
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L P + ++NAI L+ IGAL +E +T LG L L +
Sbjct: 716 LQIKSLKLG-SISEFLSRALQSPELLAVQNAIEYLKIIGALDENENLTVLGRHLTMLPME 774
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP LT+ RDPF P+ ++K A AAK + + Y SD
Sbjct: 775 PKLGKMLILGAVFNCLDPILTIVAGLSVRDPFLTPL--DKKDLAEAAKAQFSHDY---SD 829
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A+E WK+A++ +C + F+S+ M + +RK+ + L + ++++
Sbjct: 830 HLALVRAYEGWKDAEKDQIGYEYCWKNFLSAQSMKAIDSLRKEFFSLLKDTDLVDGNMAT 889
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAKVRLHPHSLNFKLSFK 953
+ + +I AV+ GLYP + + +N + F ++T +V LH +S+N +
Sbjct: 890 YNAWSYDEHLIRAVICCGLYPGICSVV---QNEKSFSLKTMEDGQVLLHSNSVNAR---- 942
Query: 954 KTDDC----PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
+C P +V++E + + + +R+ T V LLL +I
Sbjct: 943 ---ECKIPYPWLVFNEKIKVN-SVFLRDSTAVSDSVLLLFGGDI 982
Score = 244 bits (624), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 159/218 (72%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETC 236
R+++E R LP S KD + + + NQVV++SGETGCGKTTQ+PQF+LE I S +G C
Sbjct: 275 RKMLEFRGSLPASKEKDALLTAISGNQVVIVSGETGCGKTTQIPQFILESEIESVRGAVC 334
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE GK + ++FCT G+LLR L+
Sbjct: 335 SIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGKDTCLLFCTTGILLRRLL 394
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRLILMS
Sbjct: 395 ---VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMS 440
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATLDA+ FS YF G PV+ +PGFTYP+++++LE++L +
Sbjct: 441 ATLDAELFSSYFDGAPVVHIPGFTYPIRTYFLENILEM 478
>gi|291235279|ref|XP_002737580.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 36-like
[Saccoglossus kowalevskii]
Length = 495
Score = 303 bits (775), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 255/422 (60%), Gaps = 25/422 (5%)
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P+V Q+++F+ PP G RKII++TNIAET+ITI+DVV+V+++G++KE +YD NN+ TL+
Sbjct: 1 MPTVNQRQIFQTPPAGTRKIIIATNIAETSITIEDVVHVVNTGKVKESNYDVKNNICTLK 60
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
W+SKA+AKQR GR+GR + G CYHL++QLRA + D+Q+PE+ R P+EE+CLQ++LL
Sbjct: 61 PEWISKAAAKQRRGRSGRVKPGFCYHLFTQLRAHMMADYQLPEMLRTPLEEVCLQIRLLK 120
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
+IE+FL K ++PP TI A L+ + AL +E +T LG L L V P + KM+
Sbjct: 121 LG-HIEEFLSKAMNPPPVQTIITAKYSLKQLNALDDEENLTPLGYHLAKLPVEPRIGKMI 179
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
FA + CLDP LT+A + ++DPF +P+ K++ AK +L S QSD + +
Sbjct: 180 LFAAMFCCLDPVLTIAASLSFKDPFIIPLG---KEKEADAKRKLLS-RNDQSDHMMLSYT 235
Query: 842 FECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS---SCS 896
F+ W++AKQ+GQ + +C YF+SS + ML M+ Q L GF+ S + +
Sbjct: 236 FQGWEDAKQQGQRSQQNYCWDYFLSSNTLKMLDNMKTQFCEYLCNIGFVSNTQSKQAAAN 295
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF-----VETAGGAKVRLHPHSLNFKLS 951
N+ +I AV+ AGLYP VA++ + F + T +V LHP S+N
Sbjct: 296 TNSDNVKLIKAVVCAGLYPNVAKIETQMSRKKAFSRGPRLSTQQDGRVNLHPKSVNCDQQ 355
Query: 952 FKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMS 1011
D ++Y + R + G+++ + +V+ P PLL +I + +DD +D
Sbjct: 356 L----DGKWLIYHQKIRSN-GIYLHDSSVIEPYPLLFFGGDITMG-----KDDTQDVIRV 405
Query: 1012 DD 1013
DD
Sbjct: 406 DD 407
>gi|355683887|gb|AER97224.1| DEAH box polypeptide 57 [Mustela putorius furo]
Length = 656
Score = 302 bits (774), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+L+A+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 31 KLRARRSRTAFEEVEEDLRLSLHLQPQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 90
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R +
Sbjct: 91 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSH 150
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ V+ PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 151 RCVVHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 210
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 211 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 270
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 271 EQLCLRIKILEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHL 330
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 331 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAY- 387
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 388 --ANSDYLALLRAYKGWQLSTKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 444
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 445 GFVKEGLRAREIEKRAQGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 504
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P +VY E
Sbjct: 505 ---KFQKTSTGAVRMQPKSEELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEKI 558
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C+VV PL+L
Sbjct: 559 K-TSRVFIRDCSVVSVYPLVLFG 580
>gi|299470310|emb|CBN78360.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1339
Score = 302 bits (773), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 175/471 (37%), Positives = 260/471 (55%), Gaps = 31/471 (6%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A + + L +I L+R + +GAIL+FL GWE+I+ D+L A P + +
Sbjct: 416 MAMFDESEVPLDVIVDLVRHVHAYEGEGAILIFLSGWEEISAVHDKLEALP---EARAWR 472
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
+ LHS +P+ QQ+ VF RPP G RKI+++TNIAE++ITIDDVVYVID G+ KEKSYDP
Sbjct: 473 LYALHSQMPTSQQRDVFLRPPRGVRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPE 532
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
V +L +WVS+AS+KQR GRAGR Q G C+H+Y + + + + ++Q+PEI R +E LC
Sbjct: 533 AKVQSLLPAWVSQASSKQRRGRAGRVQPGRCWHVYPRSKVSEMNEYQLPEIVRTSLESLC 592
Query: 715 LQVK----LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
LQV+ + F+ K L PP V + NA+ +L IGA +E +T LG+ L
Sbjct: 593 LQVRHLGLAAGGKGGVAGFINKALTPPGVVALDNALTLLTRIGAFRTNESLTPLGKHLAL 652
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYG 830
L V P + K L ++ CLDP LT+A R+PF +P+S +K+ A AK A G
Sbjct: 653 LPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMS--KKEEADQAKRRFAQ--G 708
Query: 831 GQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
SD L + A+E W+ +R Q+ FC F+S + +R Q QT L G IP
Sbjct: 709 EPSDHLCLYNAYEAWRMCPRRDQQE-FCHVNFLSPSALRTASDVRGQFQTLLRDAGLIPR 767
Query: 891 D---VSSCSHNARVPG---IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPH 944
D ++ + ++ +P ++ A + +GLYP + R+ G++ + L+PH
Sbjct: 768 DREQLAELNRHSEMPKYWPVVRAAMCSGLYPNLVRV----DYGKKKFKLLSADHSTLNPH 823
Query: 945 SLNFKLSFKKTDDCPL----MVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
S ++ P Y E+ R GG+ + + T PLPLLL
Sbjct: 824 P-----SSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGA 869
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 137/266 (51%), Gaps = 55/266 (20%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS---------------------- 210
K A I R KLP + + I +++NQVV+IS
Sbjct: 121 HKGAAYEDIQTSRRKLPAYARQQDILEAINNNQVVVISGETGCGKTTTGGQQVTLVTHRG 180
Query: 211 GETGCGKTT-------QVPQFLLEHI------------WSKGETCKIVCTQPRRISATSV 251
G T QVPQFL++ + IVCTQPRRISA V
Sbjct: 181 SSYGAAVTAGSMLWWHQVPQFLMDQYRYDGDGGDGGGDGGASKPYNIVCTQPRRISAIGV 240
Query: 252 AERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPA 311
AER++ ERGE +G +GY+IRLE + +H+ ++F T G+LLR L A
Sbjct: 241 AERVAAERGEAVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQ--------------A 286
Query: 312 KDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGC 371
+ +TH+I+DE+HER SDF++ I+RD++ L L+LMSATL+AD FS YF
Sbjct: 287 DPQLEGVTHVILDEVHERTVDSDFLIIILRDLVLQRKDLTLVLMSATLNADLFSNYFSQA 346
Query: 372 PVIQVPGFTYPVKSFYLEDVLSILKS 397
P + +PG+T+PV+ +YLED L + ++
Sbjct: 347 PKLNIPGYTFPVEEYYLEDALELTRT 372
>gi|225424116|ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
vinifera]
Length = 1195
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 270/464 (58%), Gaps = 22/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ I LIE LL IC + GA+LVF+ GW+DI+ +D+L A+P D+ + +
Sbjct: 550 LSCWNPDCIGFNLIENLLCHICENECPGAVLVFMTGWDDISSLKDKLQAHPILGDSDQVL 609
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F P G RKI+L+TNIAET+ITI+DVV+V+D G+ KE SYD
Sbjct: 610 LLTCHGSMASAEQRLIFDEPRDGVRKIVLATNIAETSITINDVVFVVDCGKAKETSYDAL 669
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SK SA+QR GRAGR Q G CYHLY + + D+Q+PEI R P++ LC
Sbjct: 670 NNTPCLLPSWISKVSAQQRRGRAGRVQPGKCYHLYPRCVYDAFADYQLPEILRTPLQSLC 729
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L P + ++NAI L+ IGAL +E +T LG L L +
Sbjct: 730 LQIKSLKLG-SISEFLSRALQSPELLAVQNAIEYLKIIGALDENENLTVLGRHLTMLPME 788
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP LT+ RDPF P+ ++K A AAK + + Y SD
Sbjct: 789 PKLGKMLILGAVFNCLDPILTIVAGLSVRDPFLTPL--DKKDLAEAAKAQFSHDY---SD 843
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A+E WK+A++ +C + F+S+ M + +RK+ + L + ++++
Sbjct: 844 HLALVRAYEGWKDAEKDQIGYEYCWKNFLSAQSMKAIDSLRKEFFSLLKDTDLVDGNMAT 903
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAKVRLHPHSLNFKLSFK 953
+ + +I AV+ GLYP + + +N + F ++T +V LH +S+N +
Sbjct: 904 YNAWSYDEHLIRAVICCGLYPGICSVV---QNEKSFSLKTMEDGQVLLHSNSVNAR---- 956
Query: 954 KTDDC----PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
+C P +V++E + + + +R+ T V LLL +I
Sbjct: 957 ---ECKIPYPWLVFNEKIKVN-SVFLRDSTAVSDSVLLLFGGDI 996
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 159/218 (72%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETC 236
R+++E R LP S KD + + + NQVV++SGETGCGKTTQ+PQF+LE I S +G C
Sbjct: 289 RKMLEFRGSLPASKEKDALLTAISGNQVVIVSGETGCGKTTQIPQFILESEIESVRGAVC 348
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE GK + ++FCT G+LLR L+
Sbjct: 349 SIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGKDTCLLFCTTGILLRRLL 408
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRLILMS
Sbjct: 409 ---VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMS 454
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATLDA+ FS YF G PV+ +PGFTYP+++++LE++L +
Sbjct: 455 ATLDAELFSSYFDGAPVVHIPGFTYPIRTYFLENILEM 492
>gi|344288805|ref|XP_003416137.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Loxodonta
africana]
Length = 1386
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 319/564 (56%), Gaps = 76/564 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++ + D +QLL +Y ++
Sbjct: 760 KLKARRNRTAFEEVEEDLRLSLYLQEQGSVKDQVPDQQLDFKQLLARYKGFSKSVIKTMS 819
Query: 537 TVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF--RDT 590
++ E ++L LIE LL I MD + GAILVFLPG +I ++L +NP F R +
Sbjct: 820 IMDFEKVNLELIEALLEWI-MDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNPLFNNRRS 878
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK
Sbjct: 879 NRCVIHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKR 938
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIP 709
YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S + L Q+PEI+R+P
Sbjct: 939 YDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYSHQLLKQQLPEIQRVP 998
Query: 710 IEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+E+LCL++K+L+ ++ + ++PP + ++R + I L+D+GAL+ DEK+T LG
Sbjct: 999 LEQLCLRIKILEMFSTHTLQSVFSRLIEPPHTDSLRASKIRLRDLGALTQDEKLTPLGYH 1058
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1059 LASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF 1116
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1117 ---ANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEIASLKRQF-TELLSD 1172
Query: 886 -GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1173 IGFVMEGLRAREIEKRAQGGDGVLDATGEEANSNADNPKLISAMLCAALYPNVVQVKSPE 1232
Query: 925 KNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEI 966
+F +T+ GA V +HP S+N+++ + D P +VY E
Sbjct: 1233 G---KFQKTSIGAVRMKPKSEELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEK 1286
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1287 IK-TSRVFIRDCSMVSVYPLVLFG 1309
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 157/244 (64%), Gaps = 23/244 (9%)
Query: 162 AMKVESLTSRIEKDANLRQ-------IVEERSKLPISSFKDVITSTVDSNQVVLISGETG 214
A V + ++I K ++Q I++ER LP ++ I + +QV++ISG TG
Sbjct: 511 AKSVHAENAKIRKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSKHQVLVISGMTG 570
Query: 215 CGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
CGKTTQ+PQF+L+ + + I+CTQPRRISA SVAER++ ER E +G +GY+IR
Sbjct: 571 CGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIR 630
Query: 273 LESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
LES + +++CT GVLLR L +G + L+ +THIIVDE+HER
Sbjct: 631 LESVKSSATRLLYCTTGVLLRRL--EGDTALQ------------GITHIIVDEVHERTEE 676
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SDF+L +++DM+ P L++ILMSATL+A+ FS+YF CPVI +PG T+PV F+LED +
Sbjct: 677 SDFLLLVLKDMILQRPSLQVILMSATLNAELFSEYFNFCPVITIPGRTFPVDQFFLEDAI 736
Query: 393 SILK 396
++ +
Sbjct: 737 AVTR 740
>gi|255078500|ref|XP_002502830.1| predicted protein [Micromonas sp. RCC299]
gi|226518096|gb|ACO64088.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/321 (47%), Positives = 208/321 (64%), Gaps = 35/321 (10%)
Query: 518 MENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSED----------GAILVF 567
MENA S M Q Y +P+ +DL L ++L+ I GA+LVF
Sbjct: 283 MENA-SAQMSQ-----YQIQADPDEVDLQLAQELIHWILTHRAGEMQTAHGGPAGAVLVF 336
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
LPGW +I++ RD + A+P F D + V+ PLHSMVP QK+VF+RPP G RK++L+TNI
Sbjct: 337 LPGWNEISQLRDNMAADPRFSDGTTLVL-PLHSMVPPQDQKRVFQRPPRGVRKVVLATNI 395
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AETA+TIDDVV+V+DSGR+KEKSYD + VSTLQ++W+S+ASA+QR GRAGR + G CY
Sbjct: 396 AETAVTIDDVVFVVDSGRLKEKSYDAHTGVSTLQAAWISRASAQQRRGRAGRVRPGECYR 455
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI------------------EDF 729
LYS R +S DFQ+PE++R P+EELCLQV++L ++ +F
Sbjct: 456 LYSTARMSSFADFQLPEMQRSPLEELCLQVRMLAEASSLGGERGGGAAAVGMGQGSTAEF 515
Query: 730 LQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDC 789
L + ++PP+ I A+ +LQDIGA+ DE +T LG LG + VHP + KML +A L+
Sbjct: 516 LLQAVEPPIPQAISQAVALLQDIGAMKDDEGLTRLGRHLGEMPVHPRVGKMLLYATLLGV 575
Query: 790 LDPALTLACASDYRDPFTLPI 810
LDP LT+ACAS YR PF + +
Sbjct: 576 LDPVLTVACASAYRSPFVVSV 596
Score = 249 bits (636), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 159/222 (71%), Gaps = 12/222 (5%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE 234
D L +I +R+ LP+ FK I V NQVVL++G TGCGKTTQVPQ+L++ W G
Sbjct: 26 DPALAEIQRKRAALPVDEFKGQILDAVARNQVVLVAGATGCGKTTQVPQYLIDDAWGNGR 85
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIG-DNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
I+CTQPRRISA +V+ER++ ERGENIG ++GY+IRLE+K +++FCTNGVLLR
Sbjct: 86 GATIMCTQPRRISAVTVSERVANERGENIGAGSVGYQIRLETKASADCALMFCTNGVLLR 145
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
L S G ++ E +L+HI++DE+HERD ++DF+ ++R +L + HLRL+
Sbjct: 146 RLTSPGADKMLE-----------SLSHIVIDELHERDLFADFLTIVLRGVLARHRHLRLV 194
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
LMSAT+ D FS YFGGCPVI+VPG+T+PV ++LED+LS++
Sbjct: 195 LMSATVREDLFSDYFGGCPVIRVPGYTHPVADYHLEDILSLV 236
>gi|149727630|ref|XP_001500458.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform 1 [Equus
caballus]
Length = 1383
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 757 KLKARHNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 816
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 817 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 876
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 877 RCVIHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 936
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 937 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 996
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 997 EQLCLRIKILEMFSTHNLQSVFSRLIEPPHIESLRASKIRLRDLGALTPDEKLTPLGYHL 1056
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1057 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1113
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1114 --ANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1170
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1171 GFVKEGLRARDIEKRAQGGDGILETTGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1230
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P +VY E
Sbjct: 1231 ---KFQKTSTGAVRMQPKSDELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEKI 1284
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1285 K-TSRVFIRDCSMVSVYPLVLFG 1306
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + +QV++ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 531 FQSILQERQSLPAWEERETILKLLSQHQVLVISGMTGCGKTTQIPQFILDDSLNGPPEKV 590
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 591 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 650
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ +THIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 651 --EGDTALQ------------GITHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILM 696
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 697 SATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 737
>gi|456753394|gb|JAA74160.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Sus scrofa]
Length = 1383
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 315/564 (55%), Gaps = 75/564 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+L+A+ RTA + E++ + + + +++AL D +QLL +Y ++
Sbjct: 756 KLRARRNRTAFEEVEEDLRLSLHLQDQDSVKDALPDQQLDFKQLLARYKGVSKSVIKTMS 815
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 816 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 875
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ V+ PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 876 RCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 935
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 936 DASKGMESLEDTFVSQANALQRKGRAGRVTSGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 995
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 996 EQLCLRIKILEMFSTHNLQSVFSRLIEPPHPDSLRASKIRLRDLGALTPDEKLTPLGYHL 1055
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1056 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1112
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1113 --ANSDYLALLRAYKGWQLSTKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1169
Query: 886 GFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1170 GFVKEGLRARDIERRAQGGGDGILEATGEEANSNAENPKLISAMLCAALYPNVVQVKSPE 1229
Query: 925 KNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEI 966
+F +T+ GA V +HP S+N+++ + D P +VY E
Sbjct: 1230 G---KFQKTSTGAVRMQPKSEELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEK 1283
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1284 IK-TSRVFIRDCSMVSVYPLVLFG 1306
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + +QV+++SG TGCGKTTQ+PQF+L+ + +
Sbjct: 530 FQSILQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKV 589
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
IVCTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 590 ANIVCTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 649
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ +THIIVDE+HER SDF+L +++D+L P L++ILM
Sbjct: 650 --EGDTALQ------------GVTHIIVDEVHERTEESDFLLLVLKDILLQRPTLQVILM 695
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV ++LED +++ +
Sbjct: 696 SATLNAELFSEYFNSCPVITIPGRTFPVDQYFLEDAIAVTR 736
>gi|431912748|gb|ELK14766.1| Putative ATP-dependent RNA helicase DHX57 [Pteropus alecto]
Length = 1382
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 314/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + ++ +A+ D +QLL +Y ++
Sbjct: 756 KLKARRNRTAFEEVEEDLRLSLHLQDQDYVRDAVPDQQLDFKQLLARYKGVSKSVIKTMS 815
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R +
Sbjct: 816 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSY 875
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ V+ PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 876 RCVVHPLHSSLSSEEQQAVFVKPPIGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 935
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 936 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 995
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 996 EQLCLRIKILEMFSTHNLQSVFSRLIEPPHPDSLRASKIRLRDLGALTPDEKLTPLGYHL 1055
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1056 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAI- 1112
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1113 --ANSDYLALLRAYKGWQLSTKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1169
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1170 GFVKEGLRARDIEKRAQGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1229
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P +VY E
Sbjct: 1230 ---KFQKTSTGAVRMQPKSDELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEKI 1283
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1284 K-TSRVFIRDCSMVSVYPLVLFG 1305
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + +QV++ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 530 FQSILQERQSLPAWEERETILKLLSKHQVLVISGMTGCGKTTQIPQFILDDSLNGPPEKV 589
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 590 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 649
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ +THIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 650 --EGDTALQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILM 695
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 696 SATLNAELFSEYFSSCPVITIPGRTFPVDQFFLEDAIAVTR 736
>gi|281350481|gb|EFB26065.1| hypothetical protein PANDA_013346 [Ailuropoda melanoleuca]
Length = 1312
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 314/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + + +A+ D +QLL +Y ++
Sbjct: 686 KLKARRSRTAFEEVEEDLRLSLHLQPQDSVRDAVPDQQLDFKQLLARYKGVSKSVIKTMS 745
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R +
Sbjct: 746 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSH 805
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ V+ PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDD+VYVIDSG+MKEK Y
Sbjct: 806 RCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDIVYVIDSGKMKEKRY 865
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 866 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFHHQLLKQQLPEIQRVPL 925
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 926 EQLCLRIKILEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHL 985
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 986 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1042
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1043 --ANSDYLALLRAYKGWQLSTKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1099
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1100 GFVKEGLRAREIEKRAHGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1159
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P +VY E
Sbjct: 1160 ---KFQKTSTGAVRMQPKSDELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEKI 1213
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1214 K-TSRVFIRDCSMVSVYPLVLFG 1235
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 148/222 (66%), Gaps = 16/222 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GE 234
+ I++ER LP ++ I + +QV++ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 459 QFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLNGPPEK 518
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR
Sbjct: 519 VANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVRSSATRLLYCTTGVLLRR 578
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G + L+ +THIIVDE+HER SDF+L +++D++ P L++IL
Sbjct: 579 L--EGDTALQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVIL 624
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 625 MSATLNAELFSEYFSSCPVITIPGRTFPVDQFFLEDAIAVTR 666
>gi|301777352|ref|XP_002924093.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Ailuropoda
melanoleuca]
Length = 1382
Score = 299 bits (766), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 314/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + + +A+ D +QLL +Y ++
Sbjct: 756 KLKARRSRTAFEEVEEDLRLSLHLQPQDSVRDAVPDQQLDFKQLLARYKGVSKSVIKTMS 815
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R +
Sbjct: 816 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSH 875
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ V+ PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDD+VYVIDSG+MKEK Y
Sbjct: 876 RCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDIVYVIDSGKMKEKRY 935
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 936 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFHHQLLKQQLPEIQRVPL 995
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 996 EQLCLRIKILEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHL 1055
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1056 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1112
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1113 --ANSDYLALLRAYKGWQLSTKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1169
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1170 GFVKEGLRAREIEKRAHGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1229
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P +VY E
Sbjct: 1230 ---KFQKTSTGAVRMQPKSDELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEKI 1283
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1284 K-TSRVFIRDCSMVSVYPLVLFG 1305
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 148/222 (66%), Gaps = 16/222 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GE 234
+ I++ER LP ++ I + +QV++ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 529 QFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLNGPPEK 588
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR
Sbjct: 589 VANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVRSSATRLLYCTTGVLLRR 648
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G + L+ +THIIVDE+HER SDF+L +++D++ P L++IL
Sbjct: 649 L--EGDTALQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVIL 694
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 695 MSATLNAELFSEYFSSCPVITIPGRTFPVDQFFLEDAIAVTR 736
>gi|255570705|ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1172
Score = 299 bits (766), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 263/460 (57%), Gaps = 12/460 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ I LIE LL IC + GA+LVF+ GW+DI+ +D+L +P D S+ +
Sbjct: 531 LSCWNPDCIGFNLIEYLLCNICENEMPGAVLVFMTGWDDISSLKDKLQVHPILGDPSRVL 590
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F P G RKI+L+TNIAET+ITI+DV++V+D G+ KE SYD
Sbjct: 591 LLTCHGSMASSEQRLIFDEPNDGARKIVLATNIAETSITINDVIFVLDCGKAKESSYDAL 650
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SK SA+QR GRAGR Q G CYHLY + + ++Q+PEI R P++ LC
Sbjct: 651 NNTPCLLPSWISKVSAQQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLC 710
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L P + ++NA L+ IGAL +E +T LG+ L +
Sbjct: 711 LQIKSLKLG-SISEFLSRALQSPELLAVQNANEYLKIIGALDQNENLTVLGKYLTMFPMQ 769
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP LT+ RDPF P+ ++K A AAK + + Y SD
Sbjct: 770 PKLGKMLILGAIFNCLDPVLTIVAGLSVRDPFLTPM--DKKDLAEAAKSQFSCDY---SD 824
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A+E WK+A++ +C + F+S M + +RK+ + L G + ++
Sbjct: 825 HLALVRAYEGWKDAERNFAGYDYCWKNFLSMQSMKAIDSLRKEFLSLLKDAGLVDGSITF 884
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
C+ + +I AV+ GLYP + + H ++T +V L+ +S+N + S
Sbjct: 885 CNTWSHEEHLIRAVICYGLYPGICSV--VHNEKSFSLKTMEDGQVLLYSNSVNARES--- 939
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V++E + + + +R+ T V LLL I+
Sbjct: 940 KIPYPWLVFNEKIKVN-AVFLRDSTAVSDSVLLLFGGSIS 978
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/218 (54%), Positives = 158/218 (72%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETC 236
R+I+E R LP KD I++ + NQVV+ISGETGCGKTTQ+PQF+LE I S +G C
Sbjct: 270 RKILEFRKNLPAYKEKDAISTAISQNQVVIISGETGCGKTTQIPQFILESEIESVRGAVC 329
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ERI+ ERGE +G+ +GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 330 NIICTQPRRISAMSVSERIASERGEKLGECVGYKVRLEGIRGRDTHLLFCTTGILLRRLL 389
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRLILMS
Sbjct: 390 ---VDR-----------NLKGITHVIVDEIHERGMNEDFLLIVLKDLLPHRPDLRLILMS 435
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATLDA+ FS YF G P++++PGFTYPV++ YLED+L +
Sbjct: 436 ATLDAELFSSYFDGAPILRIPGFTYPVRTLYLEDILEM 473
>gi|291386901|ref|XP_002709800.1| PREDICTED: DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Oryctolagus
cuniculus]
Length = 1444
Score = 299 bits (765), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 314/562 (55%), Gaps = 72/562 (12%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 818 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 877
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ + ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 878 VMDFDKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 937
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 938 RCVIHPLHSSLSSEEQQAVFIKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 997
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 998 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1057
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP S ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 1058 EQLCLRIKILEMFSTHNLQSVFSRLIEPPHSDSLRASKIRLRDLGALTPDEKLTPLGYHL 1117
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1118 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1174
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A+E W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1175 --ANSDYLALLRAYEGWRLSTKEGLRASHSYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1231
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1232 GFAKEGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKAP-- 1289
Query: 926 NGRRFVETAGGAK-----------------VRLHPHSLNFKLSFKKTDDCPLMVYDEITR 968
G+ + GG + V +HP S+N+++ + D P ++Y E +
Sbjct: 1290 EGKFQKTSTGGVRMQPRSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKIK 1346
Query: 969 GDGGMHVRNCTVVGPLPLLLLA 990
+ +R+C++V PL+L
Sbjct: 1347 -TSRVFIRDCSMVSVYPLVLFG 1367
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 147/222 (66%), Gaps = 16/222 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GE 234
+ I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 591 QFQSILQERQSLPAWEERENILKLLSRHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEK 650
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR
Sbjct: 651 VANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 710
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G + L+ +THIIVDE+HER SDF+L +++D++ P L++IL
Sbjct: 711 L--EGDTALQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVIL 756
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+ + FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 757 MSATLNTELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 798
>gi|348526524|ref|XP_003450769.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Oreochromis
niloticus]
Length = 1414
Score = 298 bits (764), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 179/505 (35%), Positives = 280/505 (55%), Gaps = 57/505 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF-- 587
K +AT++ + I++ L+E LL I + GA+LVFLPG +I ++L +N F
Sbjct: 843 KTIATMDLDKINMDLVESLLEWIVEGKHNYPPGAVLVFLPGLAEIKMLYEQLQSNRMFNN 902
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
R S+ V+ PLHS + + +Q+ VF RPP G KII+STNIAET++TIDDVVYVIDSG+MK
Sbjct: 903 RGVSRCVVYPLHSTLSNEEQQAVFSRPPDGVTKIIISTNIAETSVTIDDVVYVIDSGKMK 962
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIK 706
EK YD ++ +L+ +WVS+A+A QR GRAGR +G+C+HL+ S L + Q+PEI+
Sbjct: 963 EKRYDSSKSMESLEDTWVSQANALQRKGRAGRVASGVCFHLFTSHCFKHQLAEQQLPEIQ 1022
Query: 707 RIPIEELCLQVKLLDPNCN--IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E+LCL++K+LD +E + ++PP ++ LQD+GAL+ DEK+T L
Sbjct: 1023 RVPLEQLCLRIKILDVFAEQPLESVFFRLIEPPSMGSLDATKQRLQDLGALTTDEKLTPL 1082
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L CL V + K++ F + CLDPALT+A + ++ PF P E+ +F
Sbjct: 1083 GYHLACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKLEFA 1142
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTEL 882
+A+ SD LA++ A++ W +A + G A +C + F+S + + +++Q L
Sbjct: 1143 VAN-----SDHLALLQAYKGWCSAARNGHLASYLYCRENFLSWRGLQEIASLKRQFAELL 1197
Query: 883 IKNGFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVARLR 921
GFI E + + + N+R ++ A+L A LYP V ++R
Sbjct: 1198 SDIGFIKEGLKARIIEQMSSKGTDGVMEATGPEANLNSRNIRLMSAMLCAALYPNVVQVR 1257
Query: 922 PPH----------------KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDE 965
P N RFV T V +HP S+N+ + + + P +VY E
Sbjct: 1258 APQGTYKKTGTGVMKMQPKANELRFV-TKNDVYVHVHPSSVNYTV---RHYNSPYLVYHE 1313
Query: 966 ITRGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1314 KVK-TSRVFIRDCSMVSVYPLVLFG 1337
Score = 203 bits (517), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 146/226 (64%), Gaps = 16/226 (7%)
Query: 170 SRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
SR + ++E+R LP K+ I +D QV++ISG TGCGKTTQVPQF+L+
Sbjct: 551 SRKQSSRRYSSMLEQRKNLPAWQEKEHILDALDQCQVLVISGMTGCGKTTQVPQFILDAS 610
Query: 230 WS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
S + I+CTQPRRISA SVA+R++ ER E +G+++GY+IRLES + +++CT
Sbjct: 611 LSGPAEQVANIICTQPRRISAMSVAQRVAQERAECLGNSVGYQIRLESVRTSATRLLYCT 670
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + D+ +TH+IVDE+HER + SDF+L +++D++
Sbjct: 671 TGVLLRRLEGEA--------------DLRGVTHVIVDEVHERTQESDFLLLVLKDLMVQR 716
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
P L++ILMSATL+A+ FS YF CP I +PG T+PV +LED ++
Sbjct: 717 PDLKIILMSATLNANLFSDYFYNCPTIHIPGRTFPVDQCFLEDAIA 762
>gi|329665076|ref|NP_001192980.1| putative ATP-dependent RNA helicase DHX57 [Bos taurus]
gi|296482642|tpg|DAA24757.1| TPA: DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Bos taurus]
Length = 1383
Score = 298 bits (764), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 315/564 (55%), Gaps = 75/564 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 756 KLKARRSRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYQGVSKSVIKTMS 815
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 816 VMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 875
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 876 RCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 935
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 936 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 995
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE +T LG L
Sbjct: 996 EQLCLRIKILEMFSTHNLQSVFARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHL 1055
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1056 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1112
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1113 --ANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1169
Query: 886 GFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1170 GFVKEGLRAREIEKRAQGGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPE 1229
Query: 925 KNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEI 966
+F +T+ GA V +HP S+N+++ + D P +VY E
Sbjct: 1230 G---KFQKTSTGAVRMQPKSDELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEK 1283
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1284 IK-TSRVFIRDCSMVSVYPLVLFG 1306
Score = 202 bits (515), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ +++ER LP ++ I + +QV+++SG TGCGKTTQ+PQF+L+ + +
Sbjct: 530 FQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKV 589
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 590 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 649
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ +THIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 650 --EGDTALQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILM 695
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 696 SATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 736
>gi|440907654|gb|ELR57774.1| Putative ATP-dependent RNA helicase DHX57 [Bos grunniens mutus]
Length = 1383
Score = 298 bits (764), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 315/564 (55%), Gaps = 75/564 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 756 KLKARRSRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYQGVSKSVIKTMS 815
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 816 VMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 875
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 876 RCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 935
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 936 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 995
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE +T LG L
Sbjct: 996 EQLCLRIKILEMFSTHNLQSVFARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHL 1055
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1056 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1112
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1113 --ANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1169
Query: 886 GFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1170 GFVKEGLRAREIEKRAQGGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPE 1229
Query: 925 KNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEI 966
+F +T+ GA V +HP S+N+++ + D P +VY E
Sbjct: 1230 G---KFQKTSTGAVRMQPKSDELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEK 1283
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1284 IK-TSRVFIRDCSMVSVYPLVLFG 1306
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ +++ER LP ++ I + +QV+++SG TGCGKTTQ+PQF+L+ + +
Sbjct: 530 FQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKV 589
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 590 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 649
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ +THIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 650 --EGDTALQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILM 695
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 696 SATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 736
>gi|410955423|ref|XP_003984353.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Felis catus]
Length = 1380
Score = 298 bits (764), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 313/561 (55%), Gaps = 70/561 (12%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + + +A+ D +QLL +Y ++
Sbjct: 754 KLKARRSRTAFEEVEEDLRLSLHLQDQDSVRDAVPDQQLDFKQLLARYKGVSKSVIKTMS 813
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 814 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 873
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ V+ PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 874 RCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 933
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 934 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 993
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ +++ + ++PP ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 994 EQLCLRIKILEMFSTHSLQSVFSRLIEPPHPDSLRASKIRLRDLGALTPDEKLTPLGYHL 1053
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1054 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1110
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1111 --ANSDYLALLRAYKGWQLSTKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1167
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPP-- 923
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1168 GFVKEGLRAREIEKRAQAGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1227
Query: 924 --HKNGR------------RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRG 969
HK +FV T V +HP S+N+++ + D P +VY E R
Sbjct: 1228 KFHKTSTGAVRMQPKSEELKFV-TKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEKIR- 1282
Query: 970 DGGMHVRNCTVVGPLPLLLLA 990
+ +R+C++V PL+L
Sbjct: 1283 TSRVFIRDCSMVSVYPLVLFG 1303
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP K+ I + +QV++ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 528 FQAILQERQSLPAWEEKETILKLLSDHQVLVISGMTGCGKTTQIPQFILDDSLNGPPEKV 587
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 588 ANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 647
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ +THIIVDE+HER SDF+L +++D+L P L++ILM
Sbjct: 648 --EGDTALQ------------GITHIIVDEVHERTEESDFLLLVLKDILLQRPTLQVILM 693
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CP+I +PG T+PV F+LED +++ +
Sbjct: 694 SATLNAELFSEYFSSCPIITIPGRTFPVDQFFLEDAIAVTR 734
>gi|403269670|ref|XP_003926839.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Saimiri
boliviensis boliviensis]
Length = 1387
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 316/563 (56%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 761 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 820
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 821 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 880
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 881 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 940
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 941 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1000
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 1001 EQLCLRIKILEMFNAHNLQSVFSRLIEPPHADSLRASKIRLRDLGALTPDEKLTPLGYHL 1060
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1061 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFA-- 1116
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1117 -FANSDYLALLRAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1174
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P +
Sbjct: 1175 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLILAMLCAALYPNVVQVKSPEE 1234
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1235 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RQFDSPYLLYHEKI 1288
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1289 K-TSRVFIRDCSMVSVYPLVLFG 1310
Score = 206 bits (523), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 149/221 (67%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 535 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 594
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 595 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 654
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 655 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPTLQVILM 700
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 701 SATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 741
>gi|449274554|gb|EMC83655.1| Putative ATP-dependent RNA helicase DHX57 [Columba livia]
Length = 1371
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/507 (35%), Positives = 290/507 (57%), Gaps = 61/507 (12%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF-- 587
K ++ ++ + ++L LIE LL I GA+L+FLPG +I ++L +N F
Sbjct: 800 KTMSVMDLDKVNLELIEALLEWIVAGRHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNN 859
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
R + + V+ PLHS + S +Q+ VF RPP G KII+STNIAET++TIDDVVYVIDSG+MK
Sbjct: 860 RHSKRCVVYPLHSSLSSEEQQAVFLRPPEGVIKIIISTNIAETSVTIDDVVYVIDSGKMK 919
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIK 706
EK YDP + +L+ ++VSKA+A QR GRAGR +G+C+HL+S L Q+PEI+
Sbjct: 920 EKRYDPSKGMESLEDTFVSKANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQ 979
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E+LCL++K+L+ + L + ++PP + +++ + + LQD+GAL+ DEK+T L
Sbjct: 980 RVPLEQLCLRIKILEMFTAQTLHSVLSRLIEPPRTESLQASKLRLQDLGALTPDEKLTPL 1039
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V + K++ F + CLDPALT+A + ++ PF P ++++ A K E
Sbjct: 1040 GYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPW--DKREEANKKKLE 1097
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTEL 882
A G SD LA++ A++ W+ + Q+G +A +C + F+S V+ + +++Q TEL
Sbjct: 1098 FAV---GNSDYLALLQAYKGWRLSIQKGSQASYNYCRENFLSGRVLQEIASLKRQF-TEL 1153
Query: 883 IKN-GFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVARL 920
+ + GF+ E + + + NA +I A+L A LYP V ++
Sbjct: 1154 LSDIGFVKEGLRARDIEKKWSQGGDGVLDATGEEANTNAENIKLISAMLCAALYPNVVQV 1213
Query: 921 RPPHKNGRRFVETAGGAK-----------------VRLHPHSLNFKLSFKKTDDCPLMVY 963
+ P G+ +AG K V +HP S+N++ + + P +VY
Sbjct: 1214 KKP--EGKYQKTSAGAVKMQPKAEELKFVTKSDGYVHIHPSSVNYQ---TRHFESPYLVY 1268
Query: 964 DEITRGDGGMHVRNCTVVGPLPLLLLA 990
E + + +R+C++V PL+LL
Sbjct: 1269 HEKIK-TSRVFIRDCSMVSVYPLVLLG 1294
Score = 208 bits (530), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 149/222 (67%), Gaps = 16/222 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGE 234
+ + ++ ER KLP ++ I + ++QV+++SG TGCGKTTQ+PQF+L+ S
Sbjct: 518 HYQSLLYERQKLPAWQERENILDLLKNHQVLVVSGMTGCGKTTQIPQFILDFSLQGSPSN 577
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E IG +GY+IRLES + +++CT GVLLR
Sbjct: 578 VANIICTQPRRISAISVAERVAKERTERIGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 637
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G L+ +TH+IVDE+HER SDF+L I++D++ P LR+IL
Sbjct: 638 L--EGDLTLQ------------GITHVIVDEVHERTEESDFLLLILKDIMVQRPDLRIIL 683
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+A+ FSQYF CP+I +PG T+PV F+LEDV+++ +
Sbjct: 684 MSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVIAMTR 725
>gi|426223789|ref|XP_004006056.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Ovis aries]
Length = 1382
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 315/564 (55%), Gaps = 75/564 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 755 KLKARRSRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYQGVSKSVIKTMS 814
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 815 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 874
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 875 RCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 934
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 935 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 994
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE +T LG L
Sbjct: 995 EQLCLRIKILEMFSTHNLQAVFSRLIEPPHTDSLRASKIRLRDLGALTPDETLTPLGYHL 1054
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1055 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1111
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1112 --ANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1168
Query: 886 GFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
GF+ E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1169 GFVKEGLRAREIEKRAQGGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPE 1228
Query: 925 KNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEI 966
+F +T+ GA V +HP S+N+++ + D P +VY E
Sbjct: 1229 G---KFQKTSTGAVRMQPKSDELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLVYHEK 1282
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1283 IK-TSRVFIRDCSMVSVYPLVLFG 1305
Score = 203 bits (517), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ +++ER LP ++ I + +QV++ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 529 FQSVLQERQSLPAWEERENILKMLSKHQVLVISGMTGCGKTTQIPQFILDDSLNGPPEKV 588
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 589 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 648
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ +THIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 649 --EGDTALQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVVQRPTLQVILM 694
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 695 SATLNAELFSEYFSSCPVITIPGRTFPVDQFFLEDAIAVTR 735
>gi|40850932|gb|AAH65278.1| DHX57 protein, partial [Homo sapiens]
Length = 917
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 291 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 350
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 351 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 410
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 411 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 470
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 471 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 530
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 531 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 590
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 591 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 647
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 648 --ANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 704
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 705 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 764
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 765 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 818
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 819 K-TSRVFIRDCSMVSVYPLVLFG 840
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 148/222 (66%), Gaps = 16/222 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GE 234
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 64 QFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEK 123
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR
Sbjct: 124 VANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 183
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G + L+ ++HIIVDE+HER SDF+L +++D++ P L++IL
Sbjct: 184 L--EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVIL 229
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 230 MSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 271
>gi|426335313|ref|XP_004029172.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Gorilla gorilla
gorilla]
Length = 1250
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 658 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 717
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 718 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 777
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 778 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 837
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 838 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 897
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 898 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHL 957
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 958 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1014
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1015 --ANSDYLALLRAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1071
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1072 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1131
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1132 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1185
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1186 K-TSRVFIRDCSMVSVYPLVLFG 1207
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 432 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 491
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 492 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 551
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 552 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 597
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 598 SATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 638
>gi|332227254|ref|XP_003262808.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Nomascus
leucogenys]
Length = 1387
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 761 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 820
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 821 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 880
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 881 RCVIHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 940
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 941 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1000
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 1001 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHNDSLRASKIRLRDLGALTPDEKLTPLGYHL 1060
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1061 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFA-- 1116
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1117 -FANSDYLALLRAYKGWQLSTKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1174
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1175 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1234
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1235 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1288
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1289 K-TSRVFIRDCSMVSVYPLVLFG 1310
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 149/221 (67%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 535 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 594
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 595 ANIICTQPRRISAISVAERVAKERVERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 654
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 655 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 700
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 701 SATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 741
>gi|297667787|ref|XP_002812147.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Pongo abelii]
Length = 1387
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/561 (34%), Positives = 315/561 (56%), Gaps = 74/561 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 761 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 820
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 821 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 880
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 881 RCVIHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 940
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 941 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1000
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 1001 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHL 1060
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1061 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFA-- 1116
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1117 -FANSDYLALLRAYKGWQLSTKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1174
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1175 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1234
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1235 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1288
Query: 968 RGDGGMHVRNCTVVGPLPLLL 988
+ + +R+C++V PL+L
Sbjct: 1289 K-TSRVFIRDCSMVSVYPLVL 1308
Score = 193 bits (490), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 142/221 (64%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 535 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 594
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 595 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 654
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 655 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 700
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG + F L D L+
Sbjct: 701 SATLNAELFSEYFNSCPVITIPGRNFVFNEFILADSFVFLR 741
>gi|110755029|ref|XP_394965.3| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Apis
mellifera]
Length = 964
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/458 (39%), Positives = 264/458 (57%), Gaps = 19/458 (4%)
Query: 539 NP--ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVII 596
NP E++ L LIEQL+R IC GAILVFLPG DI K +R++ + S +VI
Sbjct: 424 NPYSEMMSLDLIEQLIRHICRTKAPGAILVFLPGMMDITKL-NRMMLDTGCYSQSHYVIY 482
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
PLHS +P++ QK +FK PP G RKII++T+IAET+ITI+DVVYVID G+MK +D N
Sbjct: 483 PLHSRMPTIDQKLIFKEPPKGVRKIIIATSIAETSITIEDVVYVIDCGKMKFGKFDIQKN 542
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQ 716
+ TL+ WVS A+AKQR GRAGR + GICYHLYS+ R +L + +PE+ R +EE+ LQ
Sbjct: 543 IQTLEPEWVSLANAKQRRGRAGRVKPGICYHLYSKAREMTLDQYPLPEMLRARLEEVILQ 602
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
+K+L FL +DPP S I ++ +LQ + AL +E +T LG L L + P
Sbjct: 603 IKILQLG-KARTFLASVMDPPSSKAIDLSLDLLQTLNALDDEEHLTPLGYHLAQLPLDPR 661
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
KM+ +A L C++P +A + ++D F P+ ++ +A K EL G SD +
Sbjct: 662 TGKMIIWAALFSCVEPVFAIAASLSFKDAFYCPLG--KEDQAHQKKLELN--MGQFSDHI 717
Query: 837 AVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDV 892
A+ A ++ A +RG + FC +YF+S + +L M+ Q L + F+ P D
Sbjct: 718 ALSEALTGFELAYKRGYASSFCREYFLSFNTLKLLSEMKTQFAQHLFQMKFMETENPND- 776
Query: 893 SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSF 952
S+ + N++ ++ A++ AGLYP VA ++ KNG T V +HP S+N K+
Sbjct: 777 SNANKNSKNTMLVKAIVCAGLYPNVAIIKRVTKNG-TLAWTPEDGSVTVHPSSVNDKV-- 833
Query: 953 KKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
K P + Y + +++ + T V P+LL A
Sbjct: 834 -KKFPSPFITY-FTKQLSTAIYLHDTTCVTA-PILLFA 868
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 153/217 (70%), Gaps = 17/217 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKI 238
+++ RSKLP + I ++ NQV++ISGETGCGKTTQV QF+L+ +G +I
Sbjct: 163 MIKVRSKLPSYKKRSEILELINENQVIVISGETGCGKTTQVAQFILDEQIEEGNGSITRI 222
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVS 297
+CTQPRRISA SVAER++ ER EN+G ++G++IRLE + SI+FCT G+LL+ L
Sbjct: 223 ICTQPRRISAISVAERVATERAENLGKSVGFQIRLEKILPRDRGSILFCTTGMLLQFL-- 280
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
QG LKE S HII+DEIHER SDF+LA+++ ++P P L+++LMSA
Sbjct: 281 QGDPALKEFS------------HIILDEIHERSTESDFVLALLKLIIPKRPDLKILLMSA 328
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
TL+++RFS+Y+ CP+I +PGFTYPV+ FYLED+L +
Sbjct: 329 TLNSERFSKYYDDCPMIHIPGFTYPVEEFYLEDILML 365
>gi|124297149|gb|AAI31535.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo sapiens]
Length = 1386
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 760 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 819
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 820 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 879
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 880 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 939
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 940 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 999
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 1000 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 1059
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1060 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFA-- 1115
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1116 -FANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1173
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1174 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1233
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1234 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1287
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1288 K-TSRVFIRDCSMVSVYPLVLFG 1309
Score = 206 bits (523), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ S +
Sbjct: 534 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLSGPPEKV 593
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 594 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 653
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 654 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 699
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 700 SATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 740
>gi|62988869|gb|AAY24256.1| unknown [Homo sapiens]
Length = 860
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 234 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 293
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 294 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 353
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 354 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 413
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 414 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 473
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 474 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 533
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 534 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 590
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 591 --ANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 647
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 648 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 707
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 708 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 761
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 762 K-TSRVFIRDCSMVSVYPLVLFG 783
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 148/222 (66%), Gaps = 16/222 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GE 234
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 7 QFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEK 66
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR
Sbjct: 67 VANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 126
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G + L+ ++HIIVDE+HER SDF+L +++D++ P L++IL
Sbjct: 127 L--EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVIL 172
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 173 MSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 214
>gi|39777586|ref|NP_945314.1| putative ATP-dependent RNA helicase DHX57 [Homo sapiens]
gi|94710252|sp|Q6P158.2|DHX57_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DHX57; AltName:
Full=DEAH box protein 57
gi|119620763|gb|EAX00358.1| hCG2039711, isoform CRA_b [Homo sapiens]
Length = 1386
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 760 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 819
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 820 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 879
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 880 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 939
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 940 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 999
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 1000 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 1059
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1060 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFA-- 1115
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1116 -FANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1173
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1174 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1233
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1234 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1287
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1288 K-TSRVFIRDCSMVSVYPLVLFG 1309
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 534 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 593
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 594 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 653
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 654 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 699
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 700 SATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 740
>gi|397493579|ref|XP_003817681.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Pan paniscus]
Length = 1387
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 761 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 820
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 821 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 880
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 881 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 940
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 941 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1000
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 1001 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 1060
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1061 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1117
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1118 --ANSDYLALLRAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1174
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1175 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1234
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1235 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1288
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1289 K-TSRVFIRDCSMVSVYPLVLFG 1310
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 535 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 594
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 595 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 654
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 655 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 700
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 701 SATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 741
>gi|114577079|ref|XP_515423.2| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform 5 [Pan
troglodytes]
Length = 1387
Score = 297 bits (760), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 761 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 820
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 821 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 880
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 881 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 940
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 941 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1000
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 1001 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 1060
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1061 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFA-- 1116
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1117 -FANSDYLALLRAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1174
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1175 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1234
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1235 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1288
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1289 K-TSRVFIRDCSMVSVYPLVLFG 1310
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 535 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 594
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 595 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 654
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 655 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 700
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 701 SATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 741
>gi|402890624|ref|XP_003908583.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Papio anubis]
Length = 1387
Score = 297 bits (760), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 314/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 761 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 820
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L N F R ++
Sbjct: 821 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQCNSLFNNRRSN 880
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 881 RCVIHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 940
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 941 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1000
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 1001 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHADSLRASKIRLRDLGALTPDEKLTPLGYHL 1060
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1061 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1117
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1118 --ANSDYLALLQAYKGWQLSTREGVRAGYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1174
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1175 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1234
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1235 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1288
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1289 K-TSRVFIRDCSMVSVYPLVLFG 1310
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 149/221 (67%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 535 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 594
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 595 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 654
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 655 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 700
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 701 SATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 741
>gi|355751263|gb|EHH55518.1| hypothetical protein EGM_04740 [Macaca fascicularis]
Length = 1387
Score = 297 bits (760), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 314/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 761 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 820
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L N F R ++
Sbjct: 821 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQCNSLFNNRRSN 880
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 881 RCVIHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 940
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 941 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1000
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 1001 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHADSLRASKIRLRDLGALTPDEKLTPLGYHL 1060
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1061 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1117
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1118 --ANSDYLALLQAYKGWQLSTREGVRAGYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1174
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1175 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1234
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1235 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1288
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1289 K-TSRVFIRDCSMVSVYPLVLFG 1310
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 149/221 (67%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 535 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 594
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 595 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 654
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 655 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 700
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 701 SATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 741
>gi|119620762|gb|EAX00357.1| hCG2039711, isoform CRA_a [Homo sapiens]
Length = 819
Score = 297 bits (760), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 193 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 252
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 253 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 312
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 313 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 372
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 373 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 432
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 433 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 492
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 493 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 549
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 550 --ANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 606
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 607 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 666
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 667 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 720
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 721 K-TSRVFIRDCSMVSVYPLVLFG 742
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 125/184 (67%), Gaps = 16/184 (8%)
Query: 215 CGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
CGKTTQ+PQF+L+ + + I+CTQPRRISA SVAER++ ER E +G +GY+IR
Sbjct: 4 CGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIR 63
Query: 273 LESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
LES + +++CT GVLLR L +G + L+ ++HIIVDE+HER
Sbjct: 64 LESVKSSATRLLYCTTGVLLRRL--EGDTALQ------------GVSHIIVDEVHERTEE 109
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SDF+L +++D++ P L++ILMSATL+A+ FS YF CPVI +PG T+PV F+LED +
Sbjct: 110 SDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAI 169
Query: 393 SILK 396
++ +
Sbjct: 170 AVTR 173
>gi|31657193|gb|AAH53623.1| DHX57 protein, partial [Homo sapiens]
Length = 852
Score = 297 bits (760), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 226 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 285
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 286 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 345
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 346 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 405
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 406 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 465
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 466 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 525
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 526 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 582
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 583 --ANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 639
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 640 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 699
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 700 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 753
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 754 K-TSRVFIRDCSMVSVYPLVLFG 775
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 147/218 (67%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + + I
Sbjct: 3 ILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANI 62
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 63 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 120
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILMSAT
Sbjct: 121 GDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSAT 168
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 169 LNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 206
>gi|380029828|ref|XP_003698567.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like, partial
[Apis florea]
Length = 863
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 251/431 (58%), Gaps = 17/431 (3%)
Query: 539 NP--ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVII 596
NP E++ L LIEQL+R IC GAILVFLPG DI K +R++ + S +VI
Sbjct: 424 NPYSEMMSLDLIEQLIRHICRTKAPGAILVFLPGMMDITKL-NRMMLDTGCYSQSHYVIY 482
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
PLHS +P++ QK +FK PP G RKII++T+IAET+ITI+DVVYVID G+MK +D N
Sbjct: 483 PLHSRMPTIDQKLIFKEPPKGVRKIIIATSIAETSITIEDVVYVIDCGKMKFGKFDIQKN 542
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQ 716
+ TL+ WVS A+AKQR GRAGR + GICYHLYS+ R +L + +PE+ R +EE+ LQ
Sbjct: 543 IQTLEPEWVSLANAKQRRGRAGRVKPGICYHLYSKAREMTLDQYPLPEMLRARLEEVILQ 602
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
+K+L FL +DPP S I ++ +LQ + AL +E +T LG L L + P
Sbjct: 603 IKILQLG-KARTFLASVMDPPSSKAIDLSLDLLQTLNALDDEEHLTPLGYHLAQLPLDPR 661
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
KM+ +A L C++P +A + ++D F P+ ++ A K EL G SD +
Sbjct: 662 TGKMIIWAALFSCVEPVFAIAASLSFKDAFYCPLGKEDQ--AHQKKLELNM--GQFSDHI 717
Query: 837 AVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDV 892
A+ A ++ A +RG + FC +YF+S + +L M+ Q L + F+ P D
Sbjct: 718 ALSEALTGFELAYKRGYASSFCREYFLSFNTLKLLSEMKTQFAQHLFQMKFMETENPSD- 776
Query: 893 SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSF 952
S+ + N++ ++ A++ AGLYP VA ++ KNG T V +HP S+N K+
Sbjct: 777 SNANKNSKNTMLVKAIVCAGLYPNVAIIKRVTKNG-TLAWTPEDGSVSVHPSSVNDKV-- 833
Query: 953 KKTDDCPLMVY 963
K P + Y
Sbjct: 834 -KKFPSPFITY 843
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 152/217 (70%), Gaps = 17/217 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKI 238
+++ RSKLP + I + NQV++ISGETGCGKTTQV QF+L+ +G +I
Sbjct: 163 MIKVRSKLPSYQKRSDILELIKENQVIVISGETGCGKTTQVAQFILDEQIEEGNGSITRI 222
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLLRLLVS 297
+CTQPRRISA SVAER++ ER EN+G ++G++IRLE + SI+FCT G+LL+ L
Sbjct: 223 ICTQPRRISAISVAERVATERAENLGKSVGFQIRLEKILPRERGSILFCTTGMLLQFL-- 280
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
QG LKE S HII+DEIHER SDF+LA+++ ++P P L+++LMSA
Sbjct: 281 QGDPALKEFS------------HIILDEIHERSTESDFVLALLKLIIPKRPDLKILLMSA 328
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
TL+++RFS+Y+ CP+I +PGFTYPV+ FYLED+L +
Sbjct: 329 TLNSERFSKYYDDCPMIHIPGFTYPVEEFYLEDILML 365
>gi|297265851|ref|XP_001102912.2| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Macaca
mulatta]
Length = 1284
Score = 296 bits (759), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 314/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 658 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 717
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L N F R ++
Sbjct: 718 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQCNSLFNNRRSN 777
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 778 RCVIHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 837
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 838 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 897
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 898 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHADSLRASKIRLRDLGALTPDEKLTPLGYHL 957
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 958 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1014
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1015 --ANSDYLALLQAYKGWQLSTREGVRAGYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1071
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1072 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1131
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1132 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1185
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1186 K-TSRVFIRDCSMVSVYPLVLFG 1207
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 149/221 (67%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 432 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 491
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 492 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 551
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 552 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 597
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 598 SATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 638
>gi|414876601|tpg|DAA53732.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea mays]
Length = 1381
Score = 296 bits (759), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 283/487 (58%), Gaps = 12/487 (2%)
Query: 504 QENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGA 563
Q+ + ++A +++ +E A + D L+ NP+ I LIE +L IC GA
Sbjct: 700 QKRKSQIASVVEDAVEAADLRDYSSRTRDS-LSCWNPDSIGFNLIENVLCHICQKERSGA 758
Query: 564 ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIIL 623
ILVF+ GW+DIN +++L ANP + S +++ H + S +QK +F +P PG RKI+L
Sbjct: 759 ILVFMTGWDDINALKEQLQANPLLGNPSAVLLLACHGSMASSEQKLIFDKPEPGVRKIVL 818
Query: 624 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAG 683
+TN+AET+ITI+DVV+V+D G+ KE SYD NN L +W+SKASA+QR GRAGR Q G
Sbjct: 819 ATNLAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASARQRRGRAGRVQPG 878
Query: 684 ICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIR 743
CYHLY + + D+Q+PE+ R P++ LCLQ+K L +I +FL + L P S++++
Sbjct: 879 ECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLRLG-SISEFLSRALQSPESLSVQ 937
Query: 744 NAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYR 803
NAI L+ IGA +E++T LG+ L L V P + KML F + +CLDP LT+ R
Sbjct: 938 NAIEYLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIFNCLDPILTIVSGLSVR 997
Query: 804 DPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFV 863
DPF P ++K A +AK + + SD LA++ A++ W+ A++ +C + F+
Sbjct: 998 DPFLTPF--DKKDLAESAKLQFSC--RDYSDHLALVRAYDGWREAERDRAGYDYCWKNFL 1053
Query: 864 SSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPP 923
S + + +R+Q L G + E+++ C+ +R ++ AV+ AGLYP V+ +
Sbjct: 1054 SVQTLKAIDSLRRQFLFLLKDTGLVDENMTMCNKWSRDENLVRAVICAGLYPGVSSVLNK 1113
Query: 924 HKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGP 983
K+ ++T +V L+ S+N K + P +V++E + + + +R+ T +
Sbjct: 1114 EKSIS--LKTMEDGQVMLYSSSVNGK---ETKIPFPWLVFNEKVKVN-SVFLRDSTAISD 1167
Query: 984 LPLLLLA 990
LLL
Sbjct: 1168 SILLLFG 1174
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 154/216 (71%), Gaps = 16/216 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKI 238
++E R LP K + + NQV+++SGETGCGKTTQ+PQ++LE ++G TC I
Sbjct: 471 MMEFRRSLPAYKEKQTLLEAISQNQVIVVSGETGCGKTTQLPQYILESEIDAARGATCSI 530
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA +V+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 531 ICTQPRRISAIAVSERVAAERGEKIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL-- 588
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRLILMSAT
Sbjct: 589 -VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSAT 636
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+A+ FS YFGG P+I +PGFTYPV+S +LED+L I
Sbjct: 637 LNAELFSSYFGGAPMIHIPGFTYPVRSHFLEDILEI 672
>gi|21666020|gb|AAM73547.1|AF283512_1 putative DEAH-box RNA/DNA helicase [Homo sapiens]
Length = 860
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 234 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 293
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 294 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 353
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 354 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 413
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+H++ S L Q+PEI+R+P+
Sbjct: 414 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHVFTSHHYNHQLLKQQLPEIQRVPL 473
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 474 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 533
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 534 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 590
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 591 --ANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 647
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 648 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 707
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 708 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 761
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 762 K-TSRVFIRDCSMVSVYPLVLFG 783
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 148/222 (66%), Gaps = 16/222 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GE 234
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ S +
Sbjct: 7 QFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLSGPPEK 66
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR
Sbjct: 67 VANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 126
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G + L+ ++HIIVDE+HER SDF+L +++D++ P L++IL
Sbjct: 127 L--EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVIL 172
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 173 MSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 214
>gi|395846034|ref|XP_003795720.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Otolemur
garnettii]
Length = 1387
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 761 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 820
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 821 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 880
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 881 RCVIHPLHSSLSSEEQQAVFLKPPIGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 940
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 941 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1000
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ +++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 1001 EQLCLRIKILEMFSTHSLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHL 1060
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1061 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1117
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1118 --ANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1174
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1175 GFAKEGLRAREIEKRAQEGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1234
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1235 ---KFQKTSTGAVKMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1288
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1289 K-TSRVFIRDCSMVSVYPLVLFG 1310
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 146/222 (65%), Gaps = 16/222 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGE 234
+ ++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 534 QFQSTLQERQSLPAWEERETILKLLSRHQVVVISGMTGCGKTTQIPQFILDESLNGPSEK 593
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR
Sbjct: 594 VANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 653
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G L+ +THIIVDE+HER SDF+L +++D++ P L++IL
Sbjct: 654 L--EGDITLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVIL 699
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+A+ FS+YF CPVI +PG T+PV F+LED +++ K
Sbjct: 700 MSATLNAELFSEYFNFCPVITIPGRTFPVDQFFLEDAIALTK 741
>gi|255069955|ref|XP_002507059.1| predicted protein [Micromonas sp. RCC299]
gi|226522334|gb|ACO68317.1| predicted protein [Micromonas sp. RCC299]
Length = 888
Score = 296 bits (757), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 181/491 (36%), Positives = 272/491 (55%), Gaps = 43/491 (8%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS--- 591
L ++ +ID L+ +L+ +C E GAILVF+PG +I+K + L NP R +
Sbjct: 332 LRAIDQSVIDYDLVTRLVEHVCASMEPGAILVFMPGLAEISKLHESLGTNPTVRAATGNG 391
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
K+ +I LHS + + +Q+ +F+ PP RKI+++TNIAET+ITIDDVVYV+DSG+ KE Y
Sbjct: 392 KY-LIGLHSTLSTAEQRTIFEHPPGDTRKIVIATNIAETSITIDDVVYVVDSGKCKENGY 450
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS-QLRAASLPDFQVPEIKRIPI 710
DP + L WVS+ASAKQR GRAGR + G C+ +Y+ Q+ + +PEIKR+P+
Sbjct: 451 DPNTRMQLLLERWVSRASAKQRRGRAGRVRPGRCFRVYTRQMHDEVFDEHTMPEIKRVPL 510
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
E LCLQ++L + I FL K L+PP +I++AI L+ IGAL E +T LG+ L
Sbjct: 511 EGLCLQIQLQRMSGGIAGFLGKALEPPEEDSIKSAIKTLRQIGALDEKENLTSLGQHLAS 570
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYG 830
L V + KML + ++ CL P LT+A R PF P+ ++++ A AAK A
Sbjct: 571 LPVDVRVGKMLLYGAVLGCLGPVLTIAAVLGGRSPFVAPL--DKREDADAAKRMFAE--- 625
Query: 831 GQSDQLAVIAAFECWKNAKQ--RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
QSD L + AF W +A+ +G E F F+S + + +R Q L + GF+
Sbjct: 626 DQSDHLTNLNAFNAWLDARALGKGAEMAFTRDNFLSFRTLEGIADLRAQFAQLLHEAGFL 685
Query: 889 --------------PE-----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGR- 928
P+ D + S+N R ++ AVL+AGLYP + ++ PHK
Sbjct: 686 GTDGKRWGRRGAPPPDDPIWLDANRNSNNTR---LVKAVLVAGLYPNLVKVGTPHKPSAP 742
Query: 929 ---RFVETAGGAK-VRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPL 984
++ G + +++HP S+N+ K +VY E + G++VR+C+ V P
Sbjct: 743 PKLHYLSDEGKEEMLQVHPSSVNYG---AKRFGSRWLVYHERVQ-TTGVYVRDCSTVTPY 798
Query: 985 PLLLLATEIAV 995
LLL +I V
Sbjct: 799 QLLLFGGKIEV 809
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 151/231 (65%), Gaps = 22/231 (9%)
Query: 169 TSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH 228
+ R + DA I +R +LP S ++ + V +NQVV+++GETGCGKTTQ+PQF+L+
Sbjct: 56 SERFDFDAG---IYAQRKRLPAWSKREELLEAVRANQVVIVAGETGCGKTTQLPQFILDD 112
Query: 229 IWSKGE--TCKIVCTQPRRISATSVAERISVERGENIG---DNIGYKIRLESKGGKHSSI 283
++ E C ++CTQPRRISATSVA R++ ERGE +G +GYKIRLES + + I
Sbjct: 113 AIARNEGGRCSLICTQPRRISATSVASRVAQERGEKLGAKGTTVGYKIRLESVASESTRI 172
Query: 284 VFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM 343
+F T GVLLR L + ++ ++H+IVDE+HER SDF+L ++RD+
Sbjct: 173 LFVTTGVLLRRLAEDPL--------------LAGVSHVIVDEVHERSLDSDFLLVLLRDV 218
Query: 344 LPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
LP P LR++LMSATL+A F YF G V +PGFT+PV+ YLED+L +
Sbjct: 219 LPHRPTLRVVLMSATLNAAAFGAYFAGAAVATIPGFTHPVQEHYLEDILQV 269
>gi|356574252|ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 1209
Score = 296 bits (757), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 262/456 (57%), Gaps = 12/456 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ I LIE +L IC + GA+LVF+ GW+DI+ +++LL + D ++ +
Sbjct: 567 LSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLTHTVLGDANRVL 626
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F+ P G RKI+L+TNIAET+ITI+DVV+V+D G+ KE SYD
Sbjct: 627 LLTCHGSMASSEQRLIFEEPEDGVRKIVLTTNIAETSITINDVVFVLDCGKAKETSYDAL 686
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L +W+SK SAKQR GRAGR Q G CYHLY + + ++Q+PEI R P++ LC
Sbjct: 687 NNTPCLLPTWISKVSAKQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLC 746
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L P ++ ++NAI L+ IGAL DE +T LG L L +
Sbjct: 747 LQIKSLRLG-SISEFLSRALQSPETLVVQNAIEYLKIIGALDEDENLTILGRCLTMLPME 805
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP LT+ RDPF P+ +++ A AK + G SD
Sbjct: 806 PKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPL--DKRDLAEEAKSQFC---GAYSD 860
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A+E W++A+ +C + F+SS M + +R++ + G + + +S
Sbjct: 861 HLALVRAYEGWRDAEMDLGGYEYCWKNFLSSQSMKAIDALRREFICLVKDIGLVDSNTAS 920
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
C+ + +I A++ GLYP + + H ++T +V L+ +S+N + +
Sbjct: 921 CNEWSSDVNLIRAIICYGLYPGICSV--VHNEKSFSLKTMEDGQVLLYSNSVNAQ---ET 975
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P +V++E + + + +R+ T V +LL
Sbjct: 976 KIPYPWLVFNEKIKVN-SVFLRDSTAVSDSVVLLFG 1010
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 152/218 (69%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
R+++E R LP K+ I S + NQVV+ISGETGCGKTTQ+PQF+LE G C
Sbjct: 306 RRMLEFRRSLPAYKKKEAILSVISRNQVVIISGETGCGKTTQIPQFILESEVESVCGAAC 365
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 366 NIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLL 425
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
A + +TH+IVDEIHER DF+L I++++LP P L+LILMS
Sbjct: 426 --------------ADRKLKGVTHVIVDEIHERGMNEDFLLIILKELLPHRPELKLILMS 471
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATLDA+ FS YF G P++ +PGFTYPV++ +LE++L +
Sbjct: 472 ATLDAELFSSYFNGAPIMFIPGFTYPVRTHFLENILEM 509
>gi|350591663|ref|XP_003358680.2| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Sus scrofa]
Length = 527
Score = 296 bits (757), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 168/403 (41%), Positives = 238/403 (59%), Gaps = 46/403 (11%)
Query: 606 QQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 665
++++VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ + WV
Sbjct: 83 ERQEVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 142
Query: 666 SKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
SKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 143 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLG-G 201
Query: 726 IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAI 785
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+ F
Sbjct: 202 IAYFLSRLMDPPSNEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGA 261
Query: 786 LMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW 845
L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AFE W
Sbjct: 262 LFCCLDPVLTIAASLSFKDPFVIPLG--KEKVADARRKELAK--DTKSDHLTVVNAFEGW 317
Query: 846 KNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNA 899
+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S + N+
Sbjct: 318 EEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVRSRNPKDPES-NINS 376
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP 959
II AV+ AGLYP VA++R G K ++H H L ++
Sbjct: 377 DNEKIIKAVICAGLYPKVAKIR-----------LNLGKKRKIHLHLLKLEI--------- 416
Query: 960 LMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
++ +CT V P LL +I++ D E
Sbjct: 417 --------------YLYDCTEVSPYCLLFFGGDISIQKDSDQE 445
>gi|224133172|ref|XP_002321501.1| predicted protein [Populus trichocarpa]
gi|222868497|gb|EEF05628.1| predicted protein [Populus trichocarpa]
Length = 1062
Score = 295 bits (756), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 266/462 (57%), Gaps = 17/462 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ I LIE +L I GA+LVF+ GW+DIN +D+L A+P D + +
Sbjct: 416 LSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPILGDPCRVL 475
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F +P G RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD
Sbjct: 476 LLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDAL 535
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SKA+A+QR GRAGR Q G CYHLY + + D+Q+PE+ R P++ L
Sbjct: 536 NNTPCLLPSWISKAAARQRKGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLS 595
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L PP ++++NA+ L+ IGAL E +T LG L L V
Sbjct: 596 LQIKSLQLG-SISEFLSRALQPPEPLSVQNAVEYLKLIGALDEHENLTVLGRHLSVLPVE 654
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP +T+ RDPF +P ++K A +AK + A SD
Sbjct: 655 PKLGKMLILGTIFNCLDPIMTVVAGLSVRDPFLIPF--DKKDLAESAKAQFAG--RDCSD 710
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A+ WK+A+++ +C + F+S+ + + +RKQ L G + + + +
Sbjct: 711 HLALVRAYNGWKDAERQQSGHEYCWKNFLSAQTLKAIDSLRKQFFYLLKDTGLVDKQIEN 770
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF---KLS 951
C+ + ++ AV+ AGL+P + + +K ++T +V L+ +S+N K+
Sbjct: 771 CNSRSIDEHLMRAVICAGLFPGLCSV--VNKEKSITLKTMEDGQVLLYSNSVNAGVPKIP 828
Query: 952 FKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
+ P +V++E + + + +R+ T V LLL I
Sbjct: 829 Y------PWLVFNEKVKVN-SVFLRDSTGVSDSVLLLFGGNI 863
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 153/218 (70%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
++++E R LP KDV+ + NQV+++SGETGCGKTTQ+PQ++LE ++G C
Sbjct: 153 QKMIEFRRSLPAYKEKDVLLKAISENQVIVVSGETGCGKTTQLPQYILESEIEAARGAAC 212
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA +V+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 213 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGILLRRLL 272
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
+ +TH+IVDEIHER DF+L ++RD+LP P LRLILMS
Sbjct: 273 LDRNLK--------------GVTHVIVDEIHERGMNEDFLLIVLRDLLPRRPELRLILMS 318
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATL+A+ FS YFGG P I +PGFTYPV++ +LE++L I
Sbjct: 319 ATLNAELFSSYFGGAPAIHIPGFTYPVRAHFLENILEI 356
>gi|307204348|gb|EFN83103.1| Probable ATP-dependent RNA helicase DHX36 [Harpegnathos saltator]
Length = 976
Score = 295 bits (755), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 270/490 (55%), Gaps = 21/490 (4%)
Query: 507 QPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILV 566
Q + +IK ++ +S+ + + + LA + E + L LIE+L+R IC+ + GAIL+
Sbjct: 404 QDDFMGMIKPYIRQLISERIYPKYVTDELAKPSSEELSLKLIEKLVRHICLTKDPGAILI 463
Query: 567 FLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTN 626
FLPG DI + +R++ + +SK VI PLHS +P+V Q +FK PP G RKII++T+
Sbjct: 464 FLPGMMDILQL-NRMMVESGYYPSSKHVIYPLHSRMPTVDQAIIFKEPPYGIRKIIIATS 522
Query: 627 IAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICY 686
IAET+ITI+DV+YVI+ G+ K +D +NN+ TL+S WVS ASAKQR GRAGR Q+G CY
Sbjct: 523 IAETSITIEDVIYVINCGKTKLGRFDIHNNIQTLESEWVSLASAKQRRGRAGRVQSGECY 582
Query: 687 HLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAI 746
HLYS+ R + + +PE+ R +EE+ LQ+K+L ++FL +DPP I ++
Sbjct: 583 HLYSKAREKTFDQYPLPEMLRTRLEEVILQIKILQLG-KAKEFLANVMDPPDLKAIDLSL 641
Query: 747 IVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPF 806
+L+ + AL DE +T LG L L + P KM+ +A L C +P +A + ++D F
Sbjct: 642 DLLRTLNALDNDEHLTPLGYHLAHLPLDPRTGKMILWAALFSCAEPIFAIAASLTFKDAF 701
Query: 807 TLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSG 866
P+ E+ A K EL+ G SD +A+ A + ++ A Q G FC +YF+S
Sbjct: 702 YCPLDREEE--ANEKKLELS--LGQYSDHMALAEALQRFEMAYQHGVAGRFCREYFLSYN 757
Query: 867 VMNMLLGMRKQLQTELIKNGFIPED------VSSCSHNARVPGIIHAVLMAGLYPMVARL 920
+ +L M+ L + F+ + SHN +I A++ AGLYP +A +
Sbjct: 758 TLKLLSEMKTDFAKYLYEMKFLDSSNPNNMNANRNSHNM---ALIKAIVCAGLYPNIAVV 814
Query: 921 RPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTV 980
R KNG T V +HP S+N ++ + P T+ + T
Sbjct: 815 RRTTKNG-VICWTPEDGTVHMHPSSVN-----SRSSNFPSRYLTYFTKQRSTAIFLHDTT 868
Query: 981 VGPLPLLLLA 990
+P+LL A
Sbjct: 869 CVSIPILLFA 878
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 145/217 (66%), Gaps = 17/217 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+ +++ R KLP K I + NQVV++SGETGCGKTTQV QF+L+ G
Sbjct: 173 KNMLKFRLKLPAYQKKSEILQLIQDNQVVVVSGETGCGKTTQVAQFILDEQLKAGNGSIT 232
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLL 295
+IVCTQPRRISA SVAER++ ER E +G ++GY+IRLE + SI+FCT G+LL+L+
Sbjct: 233 RIVCTQPRRISAISVAERVAAERAEPLGKSVGYQIRLEKVAAQEQGSILFCTTGILLQLM 292
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
PA + S H+I+DEIHER SDF++ +++ ++P L+++LM
Sbjct: 293 -----------KTDPALRNFS---HVILDEIHERSTESDFIITLLKQVIPKRTDLKVLLM 338
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SATL+++RFS Y+ CPVI +PGFTYPVK FYLED+L
Sbjct: 339 SATLNSERFSTYYDRCPVIHIPGFTYPVKEFYLEDIL 375
>gi|225448150|ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
gi|297739540|emb|CBI29722.3| unnamed protein product [Vitis vinifera]
Length = 1458
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 189/517 (36%), Positives = 277/517 (53%), Gaps = 71/517 (13%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L +N ++ID L+E L+ + GAILVFLPG +I D+L A+ FR S
Sbjct: 888 LKRLNEDVIDYDLLEDLVCYVDETYPAGAILVFLPGVAEIYMLLDKLAASYRFRGLSSDW 947
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PLHS + S Q+KVF +PP RK+I++TNIAET+ITIDDVVYVID G+ KE Y+P
Sbjct: 948 LLPLHSSIASDDQRKVFLQPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQ 1007
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEEL 713
+S++ W+S+A+AKQR GRAGR + GIC+ LY+ R L FQVPE+ R+P+ EL
Sbjct: 1008 KKLSSMVEDWISQANAKQRRGRAGRVKPGICFSLYTHYRFEKLLRPFQVPEMLRMPLVEL 1067
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
CLQ+KLL NI+ FL K L+PP + +AI VL ++GA+ DE++T LG L L V
Sbjct: 1068 CLQIKLLSLG-NIKPFLSKALEPPTEEAMTSAISVLYEVGAIEGDEELTPLGHHLAKLPV 1126
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS--LYGG 831
L+ KM+ + + CL P L+++ Y+ PF P +E++ AK L + + G
Sbjct: 1127 DVLIGKMMLYGAIFGCLSPILSISAFLSYKSPFLSP--KDERQNVERAKLALLTDQVDGA 1184
Query: 832 --------QSDQLAVIAAFECWKNA-KQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQT 880
QSD L ++ A++ W+ ++G +A FC+ YF+SS VM+M+ MR Q
Sbjct: 1185 SDSNDGARQSDHLVMMVAYKKWERILHEKGAKAAQHFCNSYFLSSSVMHMIRDMRVQFGN 1244
Query: 881 ELIKNGFIP------------EDVSSCSHNARVP--------GIIHAVLMAGLYPMVA-- 918
L G I E+++S + P I+ A+L AGLYP VA
Sbjct: 1245 LLADIGLISLPKKYQIERKKKENLNSWFSDISQPFNTYSHHFSIVKAILCAGLYPNVAAT 1304
Query: 919 --------------------RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC 958
+ RP +GRR +V +HP S+N L+
Sbjct: 1305 EQGIAGVALGNIIQSSGSATKGRPVWYDGRR--------EVHIHPSSINGNLN---AFQY 1353
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
P +V+ E + + +R+ T++ P +LL I V
Sbjct: 1354 PFLVFLEKVETN-KVFLRDTTIISPYSILLFGGSINV 1389
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 147/229 (64%), Gaps = 25/229 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
K + +++ RS LPI+ K I + V+++ GETG GKTTQVPQF+L+ + G
Sbjct: 600 KIGKYKDMLKTRSGLPIAELKSEILQVLKEKSVLVVCGETGSGKTTQVPQFILDDMIEAG 659
Query: 234 E--TCKIVCTQPRRISATSVAERISVERGE----NIGDNIGYKIRLESKGGKHSSIVFCT 287
C I+CTQPRRI+A SVAER++ ER E + G +GY++RL+S + ++FCT
Sbjct: 660 NGGYCNIICTQPRRIAAISVAERVADERCEPSPGSDGSVVGYQVRLDSASNVRTKLLFCT 719
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP-- 345
G+LLR L A +K ++S +TH+IVDE+HER DF+L ++++++
Sbjct: 720 TGILLRKL----------AGDK----NLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQ 765
Query: 346 ---SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
S P L++ILMSAT+D++ FS+YFGGCPVI G T+PV +++LED+
Sbjct: 766 STDSTPKLKVILMSATVDSNLFSRYFGGCPVITAVGRTHPVSTYFLEDI 814
>gi|412987793|emb|CCO19189.1| predicted protein [Bathycoccus prasinos]
Length = 1740
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/520 (35%), Positives = 281/520 (54%), Gaps = 71/520 (13%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS- 591
+ L V+ ++L LIEQL+ I D E+GAILVFLPG +I DRL A+ + +
Sbjct: 1144 RQLQIVDENCVNLDLIEQLVTHIAEDYEEGAILVFLPGMGEIKALHDRLRASLYESEHRA 1203
Query: 592 --------------------KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETA 631
+++++PLHS + + +QK+ F +P PG RK+++STNIAET+
Sbjct: 1204 PSSVRTEDDDDDDKKKNAPPRYLLVPLHSTLTAEEQKRAFSKPAPGVRKVVMSTNIAETS 1263
Query: 632 ITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-S 690
ITIDD VYVID+G+++E ++ S+L+++WVS+ASAKQR GRAGR + G C+HLY S
Sbjct: 1264 ITIDDCVYVIDAGKVRETRFNAKTRTSSLETAWVSRASAKQRRGRAGRVKPGYCFHLYSS 1323
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLL---DPNCNIEDFLQKTLDPPVSVTIRNAII 747
+ A L DF +PEI R P++ L LQ+ L DP FL K ++PP + I +A+
Sbjct: 1324 KTEAEVLEDFAIPEISRAPLDALVLQIYSLGFTDPRA----FLSKCIEPPSKMAISSAMT 1379
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L++I + E VT LG LG L V + KML +A LDP LT+A ++ PF
Sbjct: 1380 ALKEIDVIDDRENVTPLGVHLGGLPVDARLGKMLVYACAFGVLDPILTIAACVGFKSPF- 1438
Query: 808 LPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR---GQEAWFCSQYFV 863
ISP +K+ A AAK ++ SL G SD L ++ AF W AK++ E +C +F+
Sbjct: 1439 --ISPMDKRDEADAAKKKM-SLPDGSSDHLTLVKAFAGWLEAKKKFGASGERKYCGTHFL 1495
Query: 864 SSGVMNMLLGMRKQLQTELIKNGFIPE----DVSS-------------CSHNARVPGIIH 906
S+ + + +RKQ L + GF+ + DV++ S NA ++
Sbjct: 1496 SAVSLRQIADVRKQYCELLDEMGFLHQAAQTDVTTTNRRQRTEAALREASCNASNETLVR 1555
Query: 907 AVLMAGLYPMVA---------RLRPPHKNGRRFVETAGGAKVRLHPHSL--NFKLSFKKT 955
AV+ GLYP VA ++ P++ + + V +HP S+ + S K
Sbjct: 1556 AVVCGGLYPNVAISDDLHAAKSVQLPYQTVKVRTKRDASDDVYMHPSSVCAGYASSSK-- 1613
Query: 956 DDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
P ++Y EI + G ++R+ T +G PLLL +I V
Sbjct: 1614 ---PYLLYHEIMKT-GKTYIRDATAIGAFPLLLFGGKIKV 1649
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 134/222 (60%), Gaps = 22/222 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW---SKGET 235
+Q+ + R LP + + S V ++ +ISG TGCGKTTQVPQF+ E+ G
Sbjct: 868 KQMQKIRENLPARKARSEVISAVKRSRACVISGATGCGKTTQVPQFIYENAILDERNGAN 927
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+ TQPRRISA +VAER++ ER E IGD +GY IRLES+ + ++FCT GVLLR
Sbjct: 928 TSIIITQPRRISAIAVAERVADERDEQIGDTVGYSIRLESRQSAKTRMLFCTTGVLLR-- 985
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
RL++ N ++ ++H++VDE+HERD SDF+L I+RD+ L+ M
Sbjct: 986 ------RLQQDPN------LTGISHVVVDEVHERDALSDFLLVILRDVASRRDDFHLVAM 1033
Query: 356 SATLDADRFSQYF-----GGCPVIQVPGFTYPVKSFYLEDVL 392
SAT+DAD F YF G P + + G T+PV+ + LED +
Sbjct: 1034 SATVDADLFGNYFRQVVPGEIPSVAMQGKTFPVEEYRLEDAI 1075
>gi|348574620|ref|XP_003473088.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like isoform 1
[Cavia porcellus]
Length = 1382
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 313/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 756 KLKARRNRTAFEEVEEDLRLSLHFQDQDSVKDAVPDQQLDFKQLLARYKGISKSVIKTMS 815
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GA+LVFLPG +I ++L +N F R ++
Sbjct: 816 MMDFEKVNLELIEALLEWIVDGKHSYPPGAVLVFLPGLAEIKMLYEQLQSNCLFNNRRSN 875
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ +I PLHS + S +Q+ VF +PP G KII+STNIAET++TIDDVVYVID G+MKEK Y
Sbjct: 876 RCIIHPLHSSLSSEEQQAVFIKPPVGVTKIIISTNIAETSVTIDDVVYVIDCGKMKEKRY 935
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 936 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 995
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+LD +++ + ++PP + ++R + + L+D+GAL+ DEK+T LG L
Sbjct: 996 EQLCLRIKILDMFSTHSLQSVFSRLIEPPHTDSLRASKVRLRDLGALTPDEKLTPLGYHL 1055
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1056 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAV- 1112
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S + + +++Q TEL+ +
Sbjct: 1113 --ANSDYLALLRAYKGWQLSTREGMHASYNYCRQNFLSGRALQEMASLKRQF-TELLSDI 1169
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF+ E + + + NA P +I AVL A LYP V +++ P
Sbjct: 1170 GFVREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAVLCAALYPNVVQVKTPEG 1229
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1230 ---KFQKTSTGAVRMQPKSTELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1283
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R C++V PL+L
Sbjct: 1284 K-TSRVFIRECSMVSVYPLVLFG 1305
Score = 209 bits (533), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 158/244 (64%), Gaps = 23/244 (9%)
Query: 162 AMKVESLTSRIEKDANLRQ-------IVEERSKLPISSFKDVITSTVDSNQVVLISGETG 214
A V + S+I K ++Q +++ER LP ++ I + +QVV+ISG TG
Sbjct: 507 AKSVHAENSKICKQFQMKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVVVISGMTG 566
Query: 215 CGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
CGKTTQ+PQF+L+ S + I+CTQPRRISA SVAER++ ER E +G +GY+IR
Sbjct: 567 CGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIR 626
Query: 273 LESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
LES + +++CT GVLLR L +G + L+ +THIIVDE+HER
Sbjct: 627 LESVKSSATRLLYCTTGVLLRRL--EGDTALQ------------GVTHIIVDEVHERTEE 672
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SDF+L +++D++ P+L++ILMSATLDA+ FS+YF CPVI +PG T+PV F+LED +
Sbjct: 673 SDFLLLVLKDIVLQRPNLQVILMSATLDAELFSEYFNSCPVITIPGRTFPVDQFFLEDAI 732
Query: 393 SILK 396
++ +
Sbjct: 733 AVTR 736
>gi|224097532|ref|XP_002310975.1| predicted protein [Populus trichocarpa]
gi|222850795|gb|EEE88342.1| predicted protein [Populus trichocarpa]
Length = 1020
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 282/499 (56%), Gaps = 12/499 (2%)
Query: 496 RTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKI 555
+T QL ++ + ++ +++ + N+ D+ + D LA P+ I LIE +L I
Sbjct: 373 KTQRQLAPRKRKNQITTLVEDALTNSSFDNYSSRARDS-LARWMPDCIGFNLIEAVLCHI 431
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
C GA+LVF+ GWEDI+ RD+L A+P D ++ +++ H + + +QK +F++PP
Sbjct: 432 CRKERPGAVLVFMTGWEDISCLRDQLKAHPLLGDPNRILLLTCHGSMATSEQKLIFEKPP 491
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAG 675
P KI+L+TN+AE +ITI+DVV+VID G+ KE +YD NN L SW+SKASA+QR G
Sbjct: 492 PNVHKIVLATNMAEASITINDVVFVIDCGKAKETTYDALNNTPCLLPSWISKASARQRRG 551
Query: 676 RAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLD 735
RAGR Q G CYHLY + + ++Q+PE+ R P+ LCLQ+K L +I +FL L
Sbjct: 552 RAGRVQPGECYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVG-SIGEFLSAALQ 610
Query: 736 PPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALT 795
PP + ++NAI L+ IGAL E +T LG+ L L V P + KML + C P LT
Sbjct: 611 PPKPLAVQNAIDFLKMIGALDEKENLTNLGKYLTMLPVDPKLGKMLIMGAIFGCFGPILT 670
Query: 796 LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
+ RDPF LP ++K A AAK ++ SD +A++ A+E WK A++ G
Sbjct: 671 IVSGLSVRDPFLLP--QDKKDLAGAAKSRFSA--KDYSDHMALVRAYEGWKEAEREGSAY 726
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYP 915
+C + F+S+ + + +RKQ L G I ED ++ + + ++ A++ +GLYP
Sbjct: 727 EYCWRNFLSAQTLQAIHSLRKQFNFILKDAGLIEEDTNNHNKLSHNQSLVRAIICSGLYP 786
Query: 916 MVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
+A + H+ +T +V L+ +S+N + +T P +V+ E + + + +
Sbjct: 787 GIASV--VHRETSMSFKTMDDGQVSLYANSVNARY---ETIPYPWLVFGEKVKVN-SVFI 840
Query: 976 RNCTVVGPLPLLLLATEIA 994
R+ T V L+L +A
Sbjct: 841 RDSTGVSDSVLILFGGALA 859
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 154/218 (70%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETC 236
R++++ R LP K+ + + NQV++ISGETGCGKTTQ+PQ++LE I S +G C
Sbjct: 149 RKMMDFRKSLPSFQEKEKLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFC 208
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA +VA+R+S ERGE +G+ +GYK+RLE G+++ ++FCT+G+LLR L+
Sbjct: 209 SIICTQPRRISAMAVADRVSAERGEPLGEAVGYKVRLEGVKGRNTHLLFCTSGILLRRLL 268
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
S +++ +TH+ VDEIHER DF+L +++D+L LRLILMS
Sbjct: 269 SD--------------RNLNGITHVFVDEIHERGMNEDFLLIVLKDLLSRRRDLRLILMS 314
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATL+A+ FS YFGG P I +PGFTYPV++ +LEDVL +
Sbjct: 315 ATLNAELFSNYFGGAPTIHIPGFTYPVRAHFLEDVLEM 352
>gi|348574622|ref|XP_003473089.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like isoform 2
[Cavia porcellus]
Length = 1329
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 313/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 703 KLKARRNRTAFEEVEEDLRLSLHFQDQDSVKDAVPDQQLDFKQLLARYKGISKSVIKTMS 762
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GA+LVFLPG +I ++L +N F R ++
Sbjct: 763 MMDFEKVNLELIEALLEWIVDGKHSYPPGAVLVFLPGLAEIKMLYEQLQSNCLFNNRRSN 822
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ +I PLHS + S +Q+ VF +PP G KII+STNIAET++TIDDVVYVID G+MKEK Y
Sbjct: 823 RCIIHPLHSSLSSEEQQAVFIKPPVGVTKIIISTNIAETSVTIDDVVYVIDCGKMKEKRY 882
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 883 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 942
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+LD +++ + ++PP + ++R + + L+D+GAL+ DEK+T LG L
Sbjct: 943 EQLCLRIKILDMFSTHSLQSVFSRLIEPPHTDSLRASKVRLRDLGALTPDEKLTPLGYHL 1002
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1003 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAV- 1059
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S + + +++Q TEL+ +
Sbjct: 1060 --ANSDYLALLRAYKGWQLSTREGMHASYNYCRQNFLSGRALQEMASLKRQF-TELLSDI 1116
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF+ E + + + NA P +I AVL A LYP V +++ P
Sbjct: 1117 GFVREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAVLCAALYPNVVQVKTPEG 1176
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1177 ---KFQKTSTGAVRMQPKSTELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1230
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R C++V PL+L
Sbjct: 1231 K-TSRVFIRECSMVSVYPLVLFG 1252
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 158/244 (64%), Gaps = 23/244 (9%)
Query: 162 AMKVESLTSRIEKDANLRQ-------IVEERSKLPISSFKDVITSTVDSNQVVLISGETG 214
A V + S+I K ++Q +++ER LP ++ I + +QVV+ISG TG
Sbjct: 454 AKSVHAENSKICKQFQMKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVVVISGMTG 513
Query: 215 CGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
CGKTTQ+PQF+L+ S + I+CTQPRRISA SVAER++ ER E +G +GY+IR
Sbjct: 514 CGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIR 573
Query: 273 LESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
LES + +++CT GVLLR L +G + L+ +THIIVDE+HER
Sbjct: 574 LESVKSSATRLLYCTTGVLLRRL--EGDTALQ------------GVTHIIVDEVHERTEE 619
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SDF+L +++D++ P+L++ILMSATLDA+ FS+YF CPVI +PG T+PV F+LED +
Sbjct: 620 SDFLLLVLKDIVLQRPNLQVILMSATLDAELFSEYFNSCPVITIPGRTFPVDQFFLEDAI 679
Query: 393 SILK 396
++ +
Sbjct: 680 AVTR 683
>gi|296224041|ref|XP_002757877.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Callithrix
jacchus]
Length = 1387
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 314/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 761 KLKARRNRTAFEEVEEDLRLSLHLQDQDSIKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 820
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 821 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 880
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF + P G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 881 RCVIHPLHSSLSSEEQQAVFMKHPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 940
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 941 DASKGMESLEDTFVSQANALQRRGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1000
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 1001 EQLCLRIKILEMFNAHNLQSVFSRLIEPPHADSLRASKIRLRDLGALTPDEKLTPLGYHL 1060
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1061 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1117
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1118 --ANSDYLALLRAYKGWQLSTKEGMRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1174
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1175 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLILAMLCAALYPNVVQVKSPEG 1234
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1235 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RQFDSPYLLYHEKI 1288
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1289 K-TSRVFIRDCSMVSVYPLVLFG 1310
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 149/221 (67%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 535 FQSILQERQSLPAWEERETILNLLRRHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 594
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 595 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 654
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 655 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIISQRPTLQVILM 700
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 701 SATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 741
>gi|354488941|ref|XP_003506624.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Cricetulus
griseus]
Length = 1331
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 191/569 (33%), Positives = 314/569 (55%), Gaps = 86/569 (15%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHM--ENALSDSMKQQLLD-------------- 532
+LKA+ RTA + E++ + + H+ E+++ D++ Q LD
Sbjct: 705 KLKARHNRTAFEEVEEDLR------LSLHLQDEDSVKDTIPDQQLDFKQLLARYKGVNKS 758
Query: 533 --KYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF 587
K ++ ++ E ++ LIE LL I GAILVFLPG +I ++L +N F
Sbjct: 759 VIKTMSVMDFERVNFDLIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLF 818
Query: 588 --RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
R + + VI PLHS + S +Q+ VF +PP G KII+STNIAE++ITIDDVVYVIDSG+
Sbjct: 819 NNRRSHRCVIHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAESSITIDDVVYVIDSGK 878
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPE 704
MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S + L Q+PE
Sbjct: 879 MKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYSHQLLKQQIPE 938
Query: 705 IKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
I+R+P+E+LCL++K+L+ + N++ + ++PP ++R + + L+D+GAL+ DEK+T
Sbjct: 939 IQRVPLEQLCLRIKILEMFSSHNLQSVFARLIEPPHIDSLRASKVRLRDLGALTPDEKLT 998
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
LG L L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K
Sbjct: 999 PLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKK 1056
Query: 823 FELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQT 880
E A SD LA++ A++ W+ + K+ + + +C Q F+S + + +++Q T
Sbjct: 1057 LEFAF---ANSDYLALLCAYKGWQLSTKESARAGYNYCRQNFLSGRTLQEMASLKRQF-T 1112
Query: 881 ELIKN-GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVAR 919
EL+ + GF+ E + + + NA P +I AVL A LYP V +
Sbjct: 1113 ELLSDIGFVKEGLRAREIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNVVQ 1172
Query: 920 LRPPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDDCPLM 961
++ P +F +T+ G V +HP S+N+++ + D P +
Sbjct: 1173 VKTPEG---KFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQV---RQFDSPYL 1226
Query: 962 VYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+Y E + + +R+C++V PL+L
Sbjct: 1227 LYHEKIK-TSRVFIRDCSMVSVYPLVLFG 1254
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 145/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L++ + I
Sbjct: 482 ILQERQSLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 541
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 542 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 599
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ P L++ILMSAT
Sbjct: 600 GDATLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVSQRPTLQVILMSAT 647
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LDA FS+YF CPVI +PG +PV F+LED +++ +
Sbjct: 648 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDAIAVTR 685
>gi|330805551|ref|XP_003290744.1| hypothetical protein DICPUDRAFT_155280 [Dictyostelium purpureum]
gi|325079094|gb|EGC32711.1| hypothetical protein DICPUDRAFT_155280 [Dictyostelium purpureum]
Length = 1389
Score = 293 bits (749), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 256/423 (60%), Gaps = 29/423 (6%)
Query: 543 IDLVLIEQLLRKICM---DSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH 599
+D LI Q++ I +S + +ILVFLPGWEDI++TR+ + +P F++ ++F+++ LH
Sbjct: 864 VDHALILQIMTHIVTKVSNSTEDSILVFLPGWEDISQTRELIRGHPLFKNENQFLVLALH 923
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
S V QQ KVF RPPP RKI+LSTNIAET+ITI+DVVYVIDS ++K K ++ +++
Sbjct: 924 SSVSMQQQAKVFDRPPPKVRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHETQRDLTL 983
Query: 660 LQSSWVSKASAKQRAGRAGRCQA-GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
Q+ W K+S KQR GRAGR + G+CYHL S+ R SL DFQ+PE++R+P+ ELCLQVK
Sbjct: 984 FQTVWACKSSLKQRRGRAGRVRKDGVCYHLVSRDRYNSLDDFQLPEMRRMPLHELCLQVK 1043
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
+L +I +FL L+PP + I NAI +L D+GALS + +T LG +L + V P +
Sbjct: 1044 VLVLG-SIGEFLSDALEPPEAKAIDNAINLLIDLGALSSQQDLTPLGLRLSFIPVDPRIG 1102
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY-GGQSDQLA 837
KM+ + CLDP LT+A S+ ++P + + + + + LY QSD ++
Sbjct: 1103 KMIILSSFFRCLDPILTIASFSNQKNPILNLFNQDNSYQNNFS----SQLYPEHQSDHIS 1158
Query: 838 VIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL----------QTELIKNGF 887
+ F W +K G+E +C F+S ++N +L ++KQL + + NGF
Sbjct: 1159 FLNIFNNWLQSKLEGREEEYCRD-FLSIPLLNQILKVKKQLLATIYELGIVNIQSLSNGF 1217
Query: 888 IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+ +D + N+R II +++ +GL+P VA+ R +R +T LHP S+
Sbjct: 1218 VLDDFFNA--NSRNFDIIRSIICSGLFPNVAKQR-----KKREFKTL-SENTFLHPSSIV 1269
Query: 948 FKL 950
+ L
Sbjct: 1270 YNL 1272
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 158/265 (59%), Gaps = 25/265 (9%)
Query: 152 CKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISG 211
CK + +EI ++ + R + A +++ ++R++LPI + + + +NQ+++I G
Sbjct: 617 CKSQEEISEIGIEKKIFEERKKNTAEYQRVYQKRTELPIFKQRRHLIDCIKNNQIIIIMG 676
Query: 212 ETGCGKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGY 269
+TGCGKTTQ+PQ+++E + C I+ TQPRRIS AER++ ER E +GD IGY
Sbjct: 677 DTGCGKTTQIPQYVIEDMIESNHAPYCNIIMTQPRRISVLGAAERMAYERLEKVGDTIGY 736
Query: 270 KIRLESKGGKHSS-IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
+IR E++ +S ++ CT G+LL+ + S K+ N ++H+ +DE+HE
Sbjct: 737 QIRFENQQPTGTSKLLVCTPGILLKRMYSD-----KKLHN---------VSHLFIDEVHE 782
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
RD ++DF+L I++ +L +LR+ILMSAT+D S+YF CPV V +++ + ++L
Sbjct: 783 RDIHTDFLLIILKKLLEDNINLRVILMSATIDNSSVSRYFNDCPVFNVSSYSHVAREYFL 842
Query: 389 EDVLSILKSAESNHLDSASLIVPNE 413
ED+ S L+ S++ +E
Sbjct: 843 EDI--------SKQLNDQSIVYKDE 859
>gi|384245593|gb|EIE19086.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Coccomyxa subellipsoidea C-169]
Length = 815
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 180/482 (37%), Positives = 259/482 (53%), Gaps = 23/482 (4%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
+ LA ++ ID L+E+L+ I E+GAILVFLPG +I DRL A+ R+ +
Sbjct: 294 RNLARLDENRIDYDLLEELVAHIDGSYEEGAILVFLPGLGEIMAVYDRLTASRAHREGT- 352
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+++PLHS + +Q++VF+RPP RK++L+TNIAET++TI+DVVYV+DSG++KE+ YD
Sbjct: 353 LLVLPLHSSISPGEQRRVFERPPAHVRKVVLATNIAETSLTIEDVVYVVDSGKLKERRYD 412
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR---------AASLPDFQVP 703
+S L WVS+ASA QR GRAGR + G C+ LY++ R + Q P
Sbjct: 413 ASRGMSLLVEDWVSRASALQRRGRAGRVRPGRCFGLYTRHRFEERMRNNSGGLMVSVQAP 472
Query: 704 EIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
E+ R+P+EEL LQ+ LL + FL K L+PP ++ A+ LQ IGAL+ E++T
Sbjct: 473 EMARVPLEELVLQIHLLGLGPAAQ-FLSKVLEPPPPRSVTGAVTQLQTIGALTPSEQLTP 531
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG L L V + K+L + CL PALT+A Y+ PF+ P + F
Sbjct: 532 LGRNLAQLPVDAKVGKLLLLGASLGCLSPALTIAACLSYKSPFSAPFEQQDAAMRAKQAF 591
Query: 824 ELASLYGG-QSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQ 879
++ G QSD L ++AAF+ W A +G F ++ +S+ + ML MR+Q
Sbjct: 592 GSGNVASGQQSDHLLMVAAFDGWMAASAQGGRQTAGAFARKHMLSAQTLEMLADMRQQFA 651
Query: 880 TELIKNGFIPEDVSSCSHNARVPGI------IHAVLMAGLYPMVARLRPPHKNGRRFVET 933
L GF+ + S G + AVL A LYP A + R
Sbjct: 652 AMLADIGFVAAPKGALSRGRGGKGGAGAAHWVKAVLCAALYPNAAVMDEAAGRSARPAWN 711
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
G A V +HP S+N L + P +VY E R +R+CTVV P+ LLL E+
Sbjct: 712 DGTADVHIHPSSINHPLEAHQFLR-PYLVYLEKVR-TSRTFLRDCTVVSPMALLLFGGEL 769
Query: 994 AV 995
AV
Sbjct: 770 AV 771
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 144/230 (62%), Gaps = 33/230 (14%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQ---------VPQFLLEHIWSKGE 234
+R +LP+ + + + + + +V++ G+TGCGKTTQ VPQFLL+ G+
Sbjct: 22 KRQQLPVVQIRAGLLAALADHDLVVVGGDTGCGKTTQACPLINCTAVPQFLLDAAIEAGQ 81
Query: 235 --TCKIVCTQPRRISATSVAERISVERGE----NIGDNIGYKIRLESKGGKHSSIVFCTN 288
C IVCTQPRRI+A SVA+R++ ERGE G +GY +RL++ + + ++FCT
Sbjct: 82 GGACSIVCTQPRRIAAISVADRVACERGEPAPGAAGARVGYHVRLDAASTRDTRLLFCTT 141
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP--- 345
G+LLR L S+ +++++H+IVDE+HER SDF++A+++D+L
Sbjct: 142 GILLRRLASE--------------PQLASVSHVIVDEVHERTLQSDFLMALLKDILAKRR 187
Query: 346 SYPH-LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
S H L+++LMSATLD++ F++Y+G CPV+ G T+PV+ +LED +
Sbjct: 188 SRGHPLKVVLMSATLDSNLFARYYGDCPVLVAGGRTFPVEHHFLEDTYEL 237
>gi|300793704|ref|NP_001178836.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Rattus norvegicus]
Length = 1391
Score = 292 bits (748), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 312/567 (55%), Gaps = 81/567 (14%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLD---------------- 532
+LKA+ RTAL+ E E +A ++ E ++ D++ Q LD
Sbjct: 764 RLKARHNRTALE--EVEEDLRLALHLQDE-EESVKDTIPDQQLDFKQLLVRYKGVSKSVI 820
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF-- 587
K ++ ++ E ++L LIE LL I GAILVFLPG +I ++L +N F
Sbjct: 821 KTMSVMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNN 880
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MK
Sbjct: 881 RRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMK 940
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIK 706
EK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+
Sbjct: 941 EKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQ 1000
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ DEK+T L
Sbjct: 1001 RVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPL 1060
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V + K++ + CLDPALT+A + ++ PF P ++K+ A K E
Sbjct: 1061 GYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLE 1118
Query: 825 LASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQTEL 882
A SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++Q TEL
Sbjct: 1119 FAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQF-TEL 1174
Query: 883 IKN-GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLR 921
+ + GF+ E + + + NA P +I AVL A LYP V +++
Sbjct: 1175 LSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNVVQVK 1234
Query: 922 PPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDDCPLMVY 963
P +F +T+ G V +HP S+N+++ + D P ++Y
Sbjct: 1235 TPEG---KFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLY 1288
Query: 964 DEITRGDGGMHVRNCTVVGPLPLLLLA 990
E + + +R+C++V PL+L
Sbjct: 1289 HEKIK-TSRVFIRDCSMVSVYPLVLFG 1314
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 144/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L++ + I
Sbjct: 541 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 600
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 601 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 658
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ L++ILMSAT
Sbjct: 659 GDATLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 706
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LDA FS+YF CPVI +PG +PV F+LED L++ +
Sbjct: 707 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTR 744
>gi|126304534|ref|XP_001362686.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Monodelphis
domestica]
Length = 1363
Score = 292 bits (748), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 311/570 (54%), Gaps = 92/570 (16%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHM---ENALSDSMKQQLLD--------------- 532
KA+ RTA + EV + +++ + E+ +SDS+ Q L+
Sbjct: 739 KARRNRTAFE--------EVEEDLRRSLQFSEDFVSDSVPDQQLNFKQLTTRYQGFSKSV 790
Query: 533 -KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF 587
K ++ ++ + I+L LIE LL I MD + GA+LVFLPG +I +RL N F
Sbjct: 791 IKTMSLMDLDKINLELIEALLDWI-MDGKHSYPPGAVLVFLPGLAEIKMLYERLQCNATF 849
Query: 588 --RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
R ++ +I+PLHS + S +Q+ +F +PP G KII+STNIAET+ITI+DVVYVIDSG+
Sbjct: 850 NNRRGNRCIILPLHSSLTSEEQQAIFVKPPEGVTKIIISTNIAETSITINDVVYVIDSGK 909
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPE 704
MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+S + L +PE
Sbjct: 910 MKEKRYDASKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNNQLLKQHLPE 969
Query: 705 IKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
I+R+P+E+LCL++K+L+ + +++ + ++PP ++R A + LQD+GAL+ DEK+T
Sbjct: 970 IQRVPLEQLCLRIKILEMFSDHSLQSVFSQLIEPPRIESLRTAKVRLQDLGALTSDEKLT 1029
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
LG L L V + K + F + CLDPALT+A + ++ PF P E+ +
Sbjct: 1030 PLGYHLASLPVDVRIGKFMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANQKKLE 1089
Query: 823 FELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQT 880
F LA+ SD LA++ A++ W+ + G A +C + F+S V+ + +++Q T
Sbjct: 1090 FALAN-----SDYLALLQAYKGWRLCIKEGARASYNYCRENFLSGRVLQDIASLKRQF-T 1143
Query: 881 ELIKN-GFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVA 918
EL+ + GF+ E + + + NA +I A+L A LYP V
Sbjct: 1144 ELLSDIGFVKEGLRARDIEKRWSQGGDGILEATGEEANSNAENTKLISAILCAALYPNVV 1203
Query: 919 RLRPPHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPL 960
+++ P +F +T+ GA V +HP S+N++ + + P
Sbjct: 1204 QVKTPEG---KFQKTSTGAVKMQPKVEELKFVTKNDDYVHIHPSSVNYQ---TRHFESPY 1257
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+VY E + + +R+C++V PLLL
Sbjct: 1258 LVYHEKIK-TSRVFIRDCSMVSVYPLLLFG 1286
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 145/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + +QV+++SG TGCGKTTQ+PQF+L+ + + I
Sbjct: 515 ILQERRSLPAWEERETILDLLSKHQVLVVSGMTGCGKTTQIPQFILDDTLNGPPEKVANI 574
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER+ ER E IG +GY+IRLES + +++CT GVLLR L +
Sbjct: 575 ICTQPRRISAISVAERVVKERAERIGLTVGYQIRLESVKSSATRLLYCTAGVLLRKL--E 632
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +TH+IVDE+HER DF+L +++++L P LR++LMSAT
Sbjct: 633 GDATLQ------------GVTHVIVDEVHERTEEGDFLLLVLKNLLSKNPDLRVVLMSAT 680
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
++A+ FS+YF CPVI +PG T+PV F+LED +++ K
Sbjct: 681 VNAELFSEYFNSCPVINIPGRTFPVDQFFLEDAIAMTK 718
>gi|340711835|ref|XP_003394474.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Bombus
terrestris]
Length = 977
Score = 292 bits (747), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 174/503 (34%), Positives = 277/503 (55%), Gaps = 16/503 (3%)
Query: 503 EQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDG 562
EQ + E ++ ++ ++ + + + L N E + L LIEQL+R IC + G
Sbjct: 403 EQRKRDEFHDVLYPYVRQLIATKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTKDSG 462
Query: 563 AILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
AILVFLPG DI K +L N + +++VI PLHS +P+V QK VFK PP G RKII
Sbjct: 463 AILVFLPGMMDIIKLHKIMLENRQY-PQNQYVIYPLHSRMPTVDQKLVFKTPPEGVRKII 521
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQA 682
++T+IAET+ITI+DVVYV+D G+MK +D N+ TL+ WVS A+AKQR GRAGR +A
Sbjct: 522 IATSIAETSITIEDVVYVVDCGKMKFGKFDLQKNIQTLEPEWVSLANAKQRRGRAGRVKA 581
Query: 683 GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTI 742
G+CYHLYS+ R +L + +PE+ R +EE+ LQ+K+L FL +DPP I
Sbjct: 582 GVCYHLYSKAREMALDQYPLPEMLRTRLEEVILQIKMLQLG-KARTFLASVMDPPNMKAI 640
Query: 743 RNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDY 802
++ +L+ + AL +E++T LG L L V P KM+ +A L C++P +A + +
Sbjct: 641 DLSLDLLRTLNALDDEEQLTPLGYHLAQLPVDPRTGKMIIWASLFSCVEPVFAIAASLSF 700
Query: 803 RDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYF 862
+D F P E R + + SD +A+ A ++ A ++ + FC +YF
Sbjct: 701 KDAFYCPFGKEEDARKKKLELNMNQF----SDHIALSEALRRFEIAYKKSYASSFCREYF 756
Query: 863 VSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVA 918
+S + +L M+ Q L + F+ P D+++ +++ + ++ AV+ A LYP +A
Sbjct: 757 LSFSTLKLLSEMKTQFAQHLCQMKFMDSENPADINANRNSSNI-TLVKAVVCAALYPNIA 815
Query: 919 RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNC 978
+R KNG R G+ V +HP S+N ++ + P + Y + +++ +
Sbjct: 816 IIRRVTKNGTRAWTPEDGS-VTIHPSSVNDRV---REYPNPFITYF-TKQLSTAIYLHDT 870
Query: 979 TVVGPLPLLLLATEIAVAPAPDN 1001
T V LL A ++++ N
Sbjct: 871 TCVSASILLFTAPKVSIRKEKGN 893
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 150/221 (67%), Gaps = 20/221 (9%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GE 234
N++Q R KLP + I + NQV++ISGETGCGKTTQV Q++L+ + G
Sbjct: 175 NMKQF---RLKLPSHHKRSKILELIKENQVIVISGETGCGKTTQVAQYILDDQIEQENGS 231
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLR 293
T +I+CTQPRRISA SVAER++ ERGE +G ++G++IRLE + SI FCT G+LL+
Sbjct: 232 TVRIICTQPRRISAISVAERVAAERGERLGKSVGFQIRLEKVLPRDRGSITFCTTGMLLQ 291
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
+ QG LKE S HII+DEIHER SDF+LA+++ ++P P L++I
Sbjct: 292 FM--QGDPALKEFS------------HIILDEIHERSTESDFILALLKLIIPKRPDLKVI 337
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
LMSATL+++RFS Y+ CP+I +PGFTYPV FYLED+LS
Sbjct: 338 LMSATLNSERFSSYYNDCPMIHIPGFTYPVTEFYLEDILSF 378
>gi|359491476|ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
vinifera]
Length = 1178
Score = 292 bits (747), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/489 (35%), Positives = 282/489 (57%), Gaps = 22/489 (4%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + +++ D+++ D Y L+ NP+ I LIE L I GA+LVF
Sbjct: 507 KSQIASSVEDALEVANFDAYSPRTQDSLSCWNPDSIGFNLIEHALCHIVKKERPGAVLVF 566
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DIN +D+L A+P D S+ +++ H + S +Q+ +F +P G RKI+L+TN+
Sbjct: 567 MTGWDDINSLKDQLEAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNM 626
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET+ITI+DVV+V+D G+ KE SYD NN L SW+SKASA+QR GRAGR Q G CYH
Sbjct: 627 AETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKASARQRRGRAGRVQPGECYH 686
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY + + D+Q+PE+ R P++ LCLQ+K L +I +FL + L PP ++++NAI
Sbjct: 687 LYPKCVYDAFSDYQLPELLRTPLQSLCLQIKSLQLG-SISEFLARALQPPEPLSVQNAIE 745
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGAL +E +T LG L L V P + KML F L +CL+P +T+ RDPF
Sbjct: 746 YLKTIGALDENENLTVLGRNLSMLPVEPKLGKMLIFGSLFNCLNPIMTVVAGLSVRDPFL 805
Query: 808 LPISPNEKKRATAAKFELASLYGGQ--SDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSS 865
+P ++K A +AK +L+ G+ SD LA++ A+E WK A+++ +C + F+S+
Sbjct: 806 MPF--DKKDLAESAK----ALFSGRTFSDHLALVQAYEGWKEAERQQSGYEYCWRNFLSA 859
Query: 866 GVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
+ + +R+Q L G + + +C+ + +I AV+ AGL+P + + K
Sbjct: 860 QTLKAIDSLRRQFFYLLKDAGLVENNTEACNKWSHDEHLIRAVICAGLFPGICSVVNKEK 919
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLP 985
+ ++T +V L+ +S+N + + P +V++E + + + +R+ T V
Sbjct: 920 SIS--LKTMEDGQVLLYSNSVNAR---EPKIPYPWLVFNEKVKVN-SVFLRDSTAVSDSM 973
Query: 986 LLLLATEIA 994
LLL I+
Sbjct: 974 LLLFGGRIS 982
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 155/218 (71%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+++ E R LP ++ + + + NQVV++SGETGCGKTTQ+PQ++LE ++G C
Sbjct: 273 QKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQLPQYILESEIEAARGAFC 332
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 333 SIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 392
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRLILMS
Sbjct: 393 ---VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMS 438
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATL+A+ FS YFGG P I +PGFTYPV++ +LE++L +
Sbjct: 439 ATLNAELFSSYFGGAPSIHIPGFTYPVRTHFLENILEM 476
>gi|449435206|ref|XP_004135386.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1181
Score = 292 bits (747), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 263/463 (56%), Gaps = 18/463 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ + LIE LL +IC GAILVF+ GW+DI+ +++L ++P D ++ +
Sbjct: 526 LSCWNPDCLGFNLIEYLLVRICESETPGAILVFMTGWDDISSLKEKLQSHPLLGDPTRVM 585
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F P G RK++L+TNIAET+ITI+DVVYV+D G+ KE SYD
Sbjct: 586 LLACHGSMASSEQRLIFTEPDKGVRKVVLATNIAETSITINDVVYVLDCGKAKETSYDAL 645
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SK SA+QR GRAGR Q G CYHLY + S ++Q+PEI R P++ LC
Sbjct: 646 NNTPCLLPSWISKVSAQQRRGRAGRVQPGECYHLYPRCVFGSFSEYQLPEILRTPLQSLC 705
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L P + ++NAI L+ IGA E +T LG L L +
Sbjct: 706 LQIKSLKLG-SISEFLSRALQSPELLAVQNAIEYLKIIGAFDESENLTVLGRYLTMLPME 764
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP +T+ RDPF P+ +K A AAK + + SD
Sbjct: 765 PKLGKMLIVGAIFNCLDPIMTVVAGLSVRDPFLTPL--EKKDAAEAAKSQFSQ---DHSD 819
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA+I A+ WK A++ FC + F+S M + +RK+ + L G + D S
Sbjct: 820 HLAIIRAYGAWKEAERNYGGYDFCWKNFLSIQSMKAIDSLRKEFFSLLRDTGLV--DGYS 877
Query: 895 CSHNARV--PGIIHAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAKVRLHPHSLNFKLS 951
++NA +I AV+ GLYP V + +N + F ++T +V L+ +S+N + S
Sbjct: 878 DTYNAWSLDEQLIRAVICNGLYPGVCSVV---QNEKSFSLKTMEDGQVLLYSNSVNARES 934
Query: 952 FKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V++E + + + +R+ T + LLL I+
Sbjct: 935 ---RIPYPWIVFNEKIKVN-SIFLRDSTAISDSMLLLFGGSIS 973
Score = 243 bits (619), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 157/218 (72%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETC 236
R+I+E R LP KD + T+ NQV++ISGETGCGKTTQVPQF+LE I S +G C
Sbjct: 265 REILEFRRNLPAYKEKDALLDTISQNQVIIISGETGCGKTTQVPQFILESEIESLRGAVC 324
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 325 SIICTQPRRISAMSVSERVAFERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLL 384
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRLILMS
Sbjct: 385 ---VDR-----------NLKGITHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMS 430
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATLDA+ FS YFGG +I +PGFT+PV++ +LED+L +
Sbjct: 431 ATLDAELFSSYFGGAQIIHIPGFTHPVRTHFLEDILEM 468
>gi|414876600|tpg|DAA53731.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea mays]
Length = 1125
Score = 292 bits (747), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/415 (39%), Positives = 251/415 (60%), Gaps = 6/415 (1%)
Query: 504 QENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGA 563
Q+ + ++A +++ +E A + D L+ NP+ I LIE +L IC GA
Sbjct: 700 QKRKSQIASVVEDAVEAADLRDYSSRTRDS-LSCWNPDSIGFNLIENVLCHICQKERSGA 758
Query: 564 ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIIL 623
ILVF+ GW+DIN +++L ANP + S +++ H + S +QK +F +P PG RKI+L
Sbjct: 759 ILVFMTGWDDINALKEQLQANPLLGNPSAVLLLACHGSMASSEQKLIFDKPEPGVRKIVL 818
Query: 624 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAG 683
+TN+AET+ITI+DVV+V+D G+ KE SYD NN L +W+SKASA+QR GRAGR Q G
Sbjct: 819 ATNLAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASARQRRGRAGRVQPG 878
Query: 684 ICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIR 743
CYHLY + + D+Q+PE+ R P++ LCLQ+K L +I +FL + L P S++++
Sbjct: 879 ECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLRLG-SISEFLSRALQSPESLSVQ 937
Query: 744 NAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYR 803
NAI L+ IGA +E++T LG+ L L V P + KML F + +CLDP LT+ R
Sbjct: 938 NAIEYLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIFNCLDPILTIVSGLSVR 997
Query: 804 DPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFV 863
DPF P ++K A +AK + + SD LA++ A++ W+ A++ +C + F+
Sbjct: 998 DPFLTPF--DKKDLAESAKLQFSC--RDYSDHLALVRAYDGWREAERDRAGYDYCWKNFL 1053
Query: 864 SSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVA 918
S + + +R+Q L G + E+++ C+ +R ++ AV+ AGLYP V+
Sbjct: 1054 SVQTLKAIDSLRRQFLFLLKDTGLVDENMTMCNKWSRDENLVRAVICAGLYPGVS 1108
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 154/216 (71%), Gaps = 16/216 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKI 238
++E R LP K + + NQV+++SGETGCGKTTQ+PQ++LE ++G TC I
Sbjct: 471 MMEFRRSLPAYKEKQTLLEAISQNQVIVVSGETGCGKTTQLPQYILESEIDAARGATCSI 530
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA +V+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 531 ICTQPRRISAIAVSERVAAERGEKIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL-- 588
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRLILMSAT
Sbjct: 589 -VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSAT 636
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+A+ FS YFGG P+I +PGFTYPV+S +LED+L I
Sbjct: 637 LNAELFSSYFGGAPMIHIPGFTYPVRSHFLEDILEI 672
>gi|297734269|emb|CBI15516.3| unnamed protein product [Vitis vinifera]
Length = 1057
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/489 (35%), Positives = 282/489 (57%), Gaps = 22/489 (4%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + +++ D+++ D Y L+ NP+ I LIE L I GA+LVF
Sbjct: 386 KSQIASSVEDALEVANFDAYSPRTQDSLSCWNPDSIGFNLIEHALCHIVKKERPGAVLVF 445
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DIN +D+L A+P D S+ +++ H + S +Q+ +F +P G RKI+L+TN+
Sbjct: 446 MTGWDDINSLKDQLEAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNM 505
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET+ITI+DVV+V+D G+ KE SYD NN L SW+SKASA+QR GRAGR Q G CYH
Sbjct: 506 AETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKASARQRRGRAGRVQPGECYH 565
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY + + D+Q+PE+ R P++ LCLQ+K L +I +FL + L PP ++++NAI
Sbjct: 566 LYPKCVYDAFSDYQLPELLRTPLQSLCLQIKSLQLG-SISEFLARALQPPEPLSVQNAIE 624
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGAL +E +T LG L L V P + KML F L +CL+P +T+ RDPF
Sbjct: 625 YLKTIGALDENENLTVLGRNLSMLPVEPKLGKMLIFGSLFNCLNPIMTVVAGLSVRDPFL 684
Query: 808 LPISPNEKKRATAAKFELASLYGGQ--SDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSS 865
+P ++K A +AK +L+ G+ SD LA++ A+E WK A+++ +C + F+S+
Sbjct: 685 MPF--DKKDLAESAK----ALFSGRTFSDHLALVQAYEGWKEAERQQSGYEYCWRNFLSA 738
Query: 866 GVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
+ + +R+Q L G + + +C+ + +I AV+ AGL+P + + K
Sbjct: 739 QTLKAIDSLRRQFFYLLKDAGLVENNTEACNKWSHDEHLIRAVICAGLFPGICSVVNKEK 798
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLP 985
+ ++T +V L+ +S+N + + P +V++E + + + +R+ T V
Sbjct: 799 SIS--LKTMEDGQVLLYSNSVNAR---EPKIPYPWLVFNEKVKVN-SVFLRDSTAVSDSM 852
Query: 986 LLLLATEIA 994
LLL I+
Sbjct: 853 LLLFGGRIS 861
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 155/218 (71%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+++ E R LP ++ + + + NQVV++SGETGCGKTTQ+PQ++LE ++G C
Sbjct: 152 QKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQLPQYILESEIEAARGAFC 211
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 212 SIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 271
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L +++D+LP P LRLILMS
Sbjct: 272 ---VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMS 317
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATL+A+ FS YFGG P I +PGFTYPV++ +LE++L +
Sbjct: 318 ATLNAELFSSYFGGAPSIHIPGFTYPVRTHFLENILEM 355
>gi|302807261|ref|XP_002985343.1| hypothetical protein SELMODRAFT_446247 [Selaginella moellendorffii]
gi|300146806|gb|EFJ13473.1| hypothetical protein SELMODRAFT_446247 [Selaginella moellendorffii]
Length = 1142
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/468 (36%), Positives = 261/468 (55%), Gaps = 32/468 (6%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ N ++++ LI+ L IC + +GA+LVF+ GWEDI+ D+L +P D+ K
Sbjct: 533 LSCWNSDILNFNLIQATLLHICKQAREGAVLVFMTGWEDISALLDKLKQDPVLGDSRK-- 590
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
K +F+ PPPG RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD
Sbjct: 591 -------------KLIFEHPPPGVRKIVLATNMAETSITINDVVFVVDVGKAKETSYDAL 637
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L +W+SKAS++QR GRAGR + G CYHLY + + ++Q+PE+ R P+ LC
Sbjct: 638 NNTPCLLPTWISKASSRQRRGRAGRVKPGECYHLYPKAVHEAFAEYQLPELLRTPLHSLC 697
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L ++ FL K + PP ++ ++NA+ L IGAL +++T+LG L L V
Sbjct: 698 LQIKSLQLG-DVAMFLSKAMQPPENLAVKNALEYLTTIGALDEQQELTDLGRILALLPVE 756
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + CLDP LT+A RDPF +P+ +++ A AK++ A SD
Sbjct: 757 PRLGKMLIMGSIFRCLDPVLTIAAGLAARDPFIMPM--DKRNLADQAKYDFAGREA--SD 812
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGM---RKQLQTELIKNGFIPED 891
+ ++ AFE W+ A + +C + F+S M LLGM RKQ L G I +D
Sbjct: 813 HIGLVRAFEGWEAAMSNQVASSYCWKNFLS---MQTLLGMSSLRKQFIGLLTTAGLITDD 869
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLS 951
+ + ++ P ++ AV+ +GL+P VA + K+ +T +V L S+N +
Sbjct: 870 LGFFNRYSQDPVVLRAVICSGLFPGVASVMKKQKS--VLYKTIEDGQVLLSASSVNSR-D 926
Query: 952 FKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAP 999
F + P ++Y E + M VR+ T + LLL ++ AP
Sbjct: 927 FNPKN--PWLMYSEKIKMSSVM-VRDSTCISDSTLLLFGGKLIDGHAP 971
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/267 (41%), Positives = 170/267 (63%), Gaps = 16/267 (5%)
Query: 130 EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLP 189
+++ A+ SR++ + + + + + + + ++E+ E+ ++++ R LP
Sbjct: 222 KRMSADTSRRALRGPERSASSYEESPTTTMQRSRRLEAKMKEWEESEEGQKMMTIRRNLP 281
Query: 190 ISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCTQPRRIS 247
K + + NQVV+ISGETGCGKTTQ+PQ++LE +G +C I+CTQPRRIS
Sbjct: 282 SFKEKAGLLEVIAKNQVVVISGETGCGKTTQLPQYILEAEIEAGRGGSCNIICTQPRRIS 341
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
A SVAER++ ERGE IG+ IGY++RLE +++ ++FCT G+LLR L++
Sbjct: 342 AVSVAERVASERGEVIGETIGYQVRLEGIRSRNTRLLFCTTGILLRRLLTD--------- 392
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQY 367
+ +TH+IVDEIHER DF+L I++++LP P LRL+LMSATL+A+ FS+Y
Sbjct: 393 -----PSLKGVTHVIVDEIHERGMNEDFLLVILKELLPQRPDLRLVLMSATLNAELFSKY 447
Query: 368 FGGCPVIQVPGFTYPVKSFYLEDVLSI 394
F P +PGFTYPVKS +LEDVL +
Sbjct: 448 FSKAPTAHIPGFTYPVKSHFLEDVLDL 474
>gi|427783329|gb|JAA57116.1| Putative deah-box rna helicase [Rhipicephalus pulchellus]
Length = 942
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/491 (37%), Positives = 272/491 (55%), Gaps = 30/491 (6%)
Query: 515 KKHMENALSDSMK--QQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAIL 565
++ E+A+ D+M + L KY L+ N IDL L+ L+ +IC +GAIL
Sbjct: 372 RRKFEDAIEDTMPFIRSLEGKYSNKTLGTLSEWNEMRIDLDLVHALISEICAKKPEGAIL 431
Query: 566 VFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILST 625
VFLPGWE IN L A+ R+ +IIPLHSM+P+V Q++VF RPP G RKIIL+T
Sbjct: 432 VFLPGWEQINDLNKLLTAD---RNLKGSLIIPLHSMMPTVNQRQVFDRPPAGVRKIILAT 488
Query: 626 NIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIC 685
NIAET+ITI+DVVYVID G++K ++D N++TL + WVS+A+A+QR GRAGR Q G+C
Sbjct: 489 NIAETSITINDVVYVIDCGKIKMTNFDVDKNLATLNAEWVSRANAQQRKGRAGRVQPGVC 548
Query: 686 YHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNA 745
Y LY+ R + +Q+PE+ R +E L L++K+L + E FLQK ++PP S + +
Sbjct: 549 YRLYTSWRESQFDAYQLPEMLRTRLETLILKIKILKLG-SAEAFLQKAINPPSSEALHLS 607
Query: 746 IIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDP 805
+ L + AL+ DE +T LG L L + P KM+ A + CLDP LT+A + ++D
Sbjct: 608 LQFLITLKALNEDETLTPLGYHLAKLPLDPQTGKMIIMASIFSCLDPILTVAASLSFKDA 667
Query: 806 FTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSS 865
F +P+ ++K K + A +SD + ++ F W+ A + FC F+S
Sbjct: 668 FMVPLG--KEKLVDKVKKQFAG--DSKSDHIMLVNVFSQWEEALKHRNGNEFCYANFLSW 723
Query: 866 GVMNMLLGMRKQLQTELIKNGFI------PEDVSSCSHNARVPGIIHAVLMAGLYPMVAR 919
+ ML MR+Q L + FI +++ S N +V + AV+ AGLYP VA+
Sbjct: 724 NTLKMLSNMRQQFAEYLQELNFINSKNIKARELNENSDNLKV---LQAVICAGLYPNVAK 780
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCT 979
T AK LHP S+N + D + Y +I +H + T
Sbjct: 781 GIFAKSKRLMRCSTKTDAKTSLHPKSVN--VGANGFDTQWFVYYTKIRSTKTFLH--DVT 836
Query: 980 VVGPLPLLLLA 990
V P+PLLL
Sbjct: 837 PVYPIPLLLFG 847
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 152/233 (65%), Gaps = 20/233 (8%)
Query: 166 ESLTSRIEKDANLRQ---IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVP 222
E L ++ A R+ +++ R KLP + ++ I ++ N+VV+ISGETG GKTTQVP
Sbjct: 132 ERLCQNMQAKAQSREYQSMLDFRKKLPAYTMREEIIDVIERNRVVVISGETGSGKTTQVP 191
Query: 223 QFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK- 279
QF+L+ KG CKI+CTQPRRISA SVAER++ ER E G++ GY IRLE + +
Sbjct: 192 QFILDSYIEKGLGSLCKIICTQPRRISAISVAERVAAERAERCGESAGYHIRLECRAPRD 251
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
SI+FCT G+LL+ L S + + +H+I+DE+HERD +DF+ I
Sbjct: 252 RGSILFCTTGILLQQLQSDPY--------------ILSASHVILDEVHERDLQTDFLSII 297
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
++D+L P LR+ILMSAT++AD FS+YFG CP +++PG +PV YLED+L
Sbjct: 298 LKDLLVVRPDLRVILMSATINADLFSEYFGNCPRLEIPGIAFPVDVIYLEDIL 350
>gi|427795649|gb|JAA63276.1| Putative deah-box rna helicase, partial [Rhipicephalus pulchellus]
Length = 938
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/491 (37%), Positives = 272/491 (55%), Gaps = 30/491 (6%)
Query: 515 KKHMENALSDSMK--QQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAIL 565
++ E+A+ D+M + L KY L+ N IDL L+ L+ +IC +GAIL
Sbjct: 353 RRKFEDAIEDTMPFIRSLEGKYSNKTLGTLSEWNEMRIDLDLVHALISEICAKKPEGAIL 412
Query: 566 VFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILST 625
VFLPGWE IN L A+ R+ +IIPLHSM+P+V Q++VF RPP G RKIIL+T
Sbjct: 413 VFLPGWEQINDLNKLLTAD---RNLKGSLIIPLHSMMPTVNQRQVFDRPPAGVRKIILAT 469
Query: 626 NIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIC 685
NIAET+ITI+DVVYVID G++K ++D N++TL + WVS+A+A+QR GRAGR Q G+C
Sbjct: 470 NIAETSITINDVVYVIDCGKIKMTNFDVDKNLATLNAEWVSRANAQQRKGRAGRVQPGVC 529
Query: 686 YHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNA 745
Y LY+ R + +Q+PE+ R +E L L++K+L + E FLQK ++PP S + +
Sbjct: 530 YRLYTSWRESQFDAYQLPEMLRTRLETLILKIKILKLG-SAEAFLQKAINPPSSEALHLS 588
Query: 746 IIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDP 805
+ L + AL+ DE +T LG L L + P KM+ A + CLDP LT+A + ++D
Sbjct: 589 LQFLITLKALNEDETLTPLGYHLAKLPLDPQTGKMIIMASIFSCLDPILTVAASLSFKDA 648
Query: 806 FTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSS 865
F +P+ ++K K + A +SD + ++ F W+ A + FC F+S
Sbjct: 649 FMVPLG--KEKLVDKVKKQFAG--DSKSDHIMLVNVFSQWEEALKHRNGNEFCYANFLSW 704
Query: 866 GVMNMLLGMRKQLQTELIKNGFI------PEDVSSCSHNARVPGIIHAVLMAGLYPMVAR 919
+ ML MR+Q L + FI +++ S N +V + AV+ AGLYP VA+
Sbjct: 705 NTLKMLSNMRQQFAEYLQELNFINSKNIKARELNENSDNLKV---LQAVICAGLYPNVAK 761
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCT 979
T AK LHP S+N + D + Y +I +H + T
Sbjct: 762 GIFAKSKRLMRCSTKTDAKTSLHPKSVN--VGANGFDTQWFVYYTKIRSTKTFLH--DVT 817
Query: 980 VVGPLPLLLLA 990
V P+PLLL
Sbjct: 818 PVYPIPLLLFG 828
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 152/244 (62%), Gaps = 31/244 (12%)
Query: 166 ESLTSRIEKDANLRQ---IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVP 222
E L ++ A R+ +++ R KLP + ++ I ++ N+VV+ISGETG GKTTQVP
Sbjct: 102 ERLCQNMQAKAQSREYQSMLDFRKKLPAYTMREEIIDVIERNRVVVISGETGSGKTTQVP 161
Query: 223 QFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIG-----------Y 269
QF+L+ KG CKI+CTQPRRISA SVAER++ ER E G++ G Y
Sbjct: 162 QFILDSYIEKGLGSLCKIICTQPRRISAISVAERVAAERAERCGESAGXXXXRCGESAGY 221
Query: 270 KIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
IRLE + + SI+FCT G+LL+ L S + + +H+I+DE+HE
Sbjct: 222 HIRLECRAPRDRGSILFCTTGILLQQLQSDPY--------------ILSASHVILDEVHE 267
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
RD +DF+ I++D+L P LR+ILMSAT++AD FS+YFG CP +++PG +PV YL
Sbjct: 268 RDLQTDFLSIILKDLLVVRPDLRVILMSATINADLFSEYFGNCPRLEIPGIAFPVDVIYL 327
Query: 389 EDVL 392
ED+L
Sbjct: 328 EDIL 331
>gi|224046921|ref|XP_002196913.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Taeniopygia
guttata]
Length = 1357
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 285/507 (56%), Gaps = 61/507 (12%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF-- 587
K ++ ++ + ++L LIE LL I GA+L+FLPG +I ++L N F
Sbjct: 786 KTMSVMDLDKVNLELIEALLEWIVAGRHSYPPGAVLIFLPGLAEIKMLYEQLQTNALFNN 845
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
R + + V+ PLHS + S Q+ VF RPP G KII+STNIAET++TIDDVVYVIDSG+MK
Sbjct: 846 RHSKRCVVYPLHSSLSSEDQQSVFLRPPAGVTKIIISTNIAETSVTIDDVVYVIDSGKMK 905
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIK 706
EK YDP + +L+ ++VSKA+A QR GRAGR +G+C+HL+S L Q+PEI+
Sbjct: 906 EKRYDPSKGMESLEDTFVSKANALQRKGRAGRVASGVCFHLFSSHHYNHQLVKQQLPEIQ 965
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E+LCL++K+L+ ++ L + ++PP + +++ + + L+D+GAL+ +EK+T L
Sbjct: 966 RVPLEQLCLRIKILEMFSEQSLHSVLSRLIEPPRTESLQASKVRLRDLGALTPEEKLTPL 1025
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V + K++ F + CLDPALT+A + ++ PF P ++++ A K E
Sbjct: 1026 GYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPW--DKREEANKKKLE 1083
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTEL 882
A G SD LA++ A++ W+ + + G +A +C + F+S V+ + +++Q L
Sbjct: 1084 FAV---GNSDYLALLQAYKGWRLSIKEGSQASYNYCRENFLSGRVLQEIASLKRQFAELL 1140
Query: 883 IKNGFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVARLR 921
GF+ E + + + NA +I A+L A LYP V +++
Sbjct: 1141 SDIGFVKEGLRARDIEKKWSQGGDGVLDATGEEANSNAENIKLISAMLCAALYPNVVQVK 1200
Query: 922 PPHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVY 963
P ++ +T+ GA V +HP S+N++ + + P +VY
Sbjct: 1201 KPEG---KYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQ---TRHFESPYLVY 1254
Query: 964 DEITRGDGGMHVRNCTVVGPLPLLLLA 990
E + + +R+C++V PL+LL
Sbjct: 1255 HEKIK-TSRVFIRDCSMVSVYPLVLLG 1280
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 150/222 (67%), Gaps = 16/222 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGE 234
+ + ++ ER KLP ++ I ++S+QV+++SG TGCGKTTQ+PQF+L+ S
Sbjct: 506 HFQSMLYERQKLPAWQERENILGLLESHQVLVVSGMTGCGKTTQIPQFILDASLQGSPSR 565
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
I+CTQPRRISA SVAER++ ER E IG +GY+IRLES + +++CT GVLLR
Sbjct: 566 VANIICTQPRRISAISVAERVAKERTERIGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 625
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G L+ +TH+IVDE+HER SDF+L +++D++ P LR+IL
Sbjct: 626 L--EGDLTLQ------------GVTHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIIL 671
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATL+A+ FSQYF CP+I +PG T+PV F+LEDV+++ +
Sbjct: 672 MSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVIAMTR 713
>gi|119620764|gb|EAX00359.1| hCG2039711, isoform CRA_c [Homo sapiens]
Length = 1321
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 191/536 (35%), Positives = 303/536 (56%), Gaps = 68/536 (12%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 760 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 819
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 820 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 879
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 880 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 939
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 940 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 999
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 1000 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 1059
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK-RATAAKFELAS 827
L V + K++ F + CLDPALT+A + ++ PF + +SP +KK A K E A
Sbjct: 1060 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPF-VSVSPWDKKEEANQKKLEFA- 1117
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1118 --FANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSD 1174
Query: 886 -GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1175 IGFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPE 1234
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTV 980
+F +T+ GA VR+ P S K +T+ DG +H+ +V
Sbjct: 1235 G---KFQKTSTGA-VRMQPKSAELKF---------------VTKNDGYVHIHPSSV 1271
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 534 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 593
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 594 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 653
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 654 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 699
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 700 SATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 740
>gi|428174769|gb|EKX43663.1| hypothetical protein GUITHDRAFT_140409 [Guillardia theta CCMP2712]
Length = 1453
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 267/507 (52%), Gaps = 55/507 (10%)
Query: 536 ATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVI 595
+ +N E+I+L+L+ +DG++LVFLPG +I + D L+ + R KF
Sbjct: 898 SKINYEMIELLLLHISSSSAKDSKQDGSVLVFLPGMGEIQRAHDTLVDSSRLRQVGKFWF 957
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
IPLHS +PS+ Q KVF+RPPPG RK+IL+TNIAET+ITIDD YVID GR K+ ++D
Sbjct: 958 IPLHSSLPSLDQLKVFERPPPGVRKVILATNIAETSITIDDCSYVIDCGRSKQVAFDAET 1017
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
+S L W+S+A+A+QR GRAGR + G+CY L+S+ +P+ Q PEI R+P+ LCL
Sbjct: 1018 GLSRLLEDWISRAAAQQRRGRAGRVREGVCYRLFSRRLFHRMPEQQQPEIHRVPLTGLCL 1077
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK-----------VTEL 764
Q+ + + FL++ LDPP S +I +A+ L +GA+ EK +T +
Sbjct: 1078 QIMEMQLG-SAAAFLREALDPPSSKSIEHAMDTLYGVGAIQGGEKGKWLEQGALWRLTHM 1136
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
GE L + +++ML F + C+DP LT+A + PF +P E+ F
Sbjct: 1137 GEHLAKVPADVRLARMLMFGAVFGCVDPILTVAATMTSKSPFLVPFDKREEAMKRKQSFA 1196
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTEL 882
+SD L I F+ W A++RG +E FC F+SS +N + +R+Q + L
Sbjct: 1197 HPR---DKSDHLLFIRVFDEWTKARRRGAKEERLFCQTNFLSSSSLNTISDLREQFRELL 1253
Query: 883 IKNGFIPEDV-------------SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
GFI +SC+ N+ ++ AV+ AGLYP V R++ P +
Sbjct: 1254 SDAGFIHSRANSRVRNMLTYQLDASCNSNSDNVRLLRAVIAAGLYPHVIRVQLPET---K 1310
Query: 930 FVE------------------TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
FVE T +V LHP S+NF + P +VY + +
Sbjct: 1311 FVEQAAGAIARAATAKELKLYTEKDGRVFLHPSSINFS---EGDFLSPWLVYHD-KQATS 1366
Query: 972 GMHVRNCTVVGPLPLLLLATEIAVAPA 998
+ +R+ ++V P L+L T++ + A
Sbjct: 1367 KVFIRDSSMVTPYALVLFGTDLRILHA 1393
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 134/210 (63%), Gaps = 18/210 (8%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET--CK 237
++ ++R LP ++ I + NQV++ISGETGCGKTTQVPQF+L+ + +G
Sbjct: 660 KLQDKRRSLPAWKAREEIIEKLSKNQVLIISGETGCGKTTQVPQFILDDLIERGGGGGAN 719
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I+CTQPRRISA VAER++ ER E++G +IGY+IRLESK + + ++FCT G+LLR +
Sbjct: 720 IICTQPRRISALGVAERVAQERCEDVGGSIGYQIRLESKRSRQTRMLFCTTGILLRRM-- 777
Query: 298 QGVSRLKEASNKPAKD-DVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
A+D ++S ++H++VDE+HER SDF+L ++R ++ +++ILMS
Sbjct: 778 -------------AEDRELSGVSHVMVDEVHERSVDSDFLLILLRRLIRKRKDIKIILMS 824
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSF 386
ATLDA +F +YF P KSF
Sbjct: 825 ATLDAHKFCKYFDDAPAFTFQASLSLWKSF 854
>gi|390348136|ref|XP_794990.3| PREDICTED: putative ATP-dependent RNA helicase DHX57, partial
[Strongylocentrotus purpuratus]
Length = 1202
Score = 290 bits (742), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 279/509 (54%), Gaps = 65/509 (12%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDS----EDGAILVFLPGWEDINKTRDRL---LANP 585
K LAT++ E I+ LIE L++ + +DGAIL+FLPG +I ++L L P
Sbjct: 631 KTLATIDAEKINNDLIEDLVKWMVEGDHQYPKDGAILIFLPGLGEITDLYEQLQSSLCGP 690
Query: 586 FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
R K+ +IPLHS + S Q F +P G KI+++TNIAET+ITIDD+V+VID+GR
Sbjct: 691 --RKPKKYKLIPLHSSLSSEDQNAAFDKPQEGITKIVIATNIAETSITIDDIVFVIDAGR 748
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS-QLRAASLPDFQVPE 704
MKEK YD + +L++ WVSKA+A QR GRAGR AG+C+HL++ +L D Q+PE
Sbjct: 749 MKEKRYDSGKRMESLETVWVSKANAMQRRGRAGRVTAGVCFHLFTNHTFEFALRDQQLPE 808
Query: 705 IKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
I+RIP+E+L L++K+LD ++++ L K L+PP + I +AI LQD+GA++LD+ +T
Sbjct: 809 IQRIPLEQLLLRIKILDVFQGYHVKEVLNKLLEPPKNENIDDAIQRLQDLGAVTLDQDLT 868
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
LG L L V + K++ F + CLDP LT+A + +R PF P +++ +A +
Sbjct: 869 PLGYHLASLPVDVRIGKLMLFGAIFQCLDPVLTIAASLSFRSPFMAPF--DKRDQADKKR 926
Query: 823 FELASLYGGQSDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQT 880
E A G SD L ++ A+ W A +R FC + F+S + M+ M+ Q
Sbjct: 927 QEFAV---GNSDHLTLLRAYTGWTTAIERSNYFSYRFCHENFLSVKTLQMIASMKHQFAE 983
Query: 881 ELIKNGFIPED-----------------VSSCSH----NARVPGIIHAVLMAGLYPMVAR 919
L GF+ + + SC + NA ++ AVL A LYP V +
Sbjct: 984 LLSSIGFVSLNLTGRQMDRRSNGYGDMIIKSCDNQINVNASNDKLVVAVLCAALYPNVVQ 1043
Query: 920 LRPPHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLM 961
+ P ++ +++ GA V +HP S+NF + + + P +
Sbjct: 1044 VLTPEA---KYTQSSAGAVPMNPKAQEIKFKTKDDGYVSVHPKSVNFGV---RHFESPYL 1097
Query: 962 VYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
V+ E + +++R+C++V PLLL
Sbjct: 1098 VFLEKVKT-SKVYIRDCSMVSVYPLLLFG 1125
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 148/216 (68%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL-EHIWSKG-ETC 236
+ ++E R LP +D I T+ NQV+++SG TGCGKTTQVPQF+L E ++ KG
Sbjct: 347 KSMLERREALPAWKEQDNILDTLSKNQVLVVSGSTGCGKTTQVPQFILDESMYGKGLNVS 406
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISAT+VA+R++ ER +GD +GY+IRLE+K + ++FCT G+LLR L
Sbjct: 407 NIICTQPRRISATAVADRVAKERTTRVGDIVGYQIRLENKQSASTRLMFCTTGILLRRLE 466
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
S V +S ++H+IVDE+HER SDF++ ++RDMLP P LR+ILMS
Sbjct: 467 SDPV--------------LSGVSHVIVDEVHERSEESDFLMMVLRDMLPQRPDLRVILMS 512
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+AD FS YF CPVI +PG T+PV ++LED +
Sbjct: 513 ATLNADLFSSYFFNCPVINIPGKTFPVDQYFLEDAI 548
>gi|15217831|ref|NP_176102.1| helicase domain-containing protein [Arabidopsis thaliana]
gi|12321256|gb|AAG50700.1|AC079604_7 hypothetical protein [Arabidopsis thaliana]
gi|332195370|gb|AEE33491.1| helicase domain-containing protein [Arabidopsis thaliana]
Length = 1417
Score = 290 bits (741), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 190/498 (38%), Positives = 273/498 (54%), Gaps = 42/498 (8%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
KY+A+ ++D L+E+L+ I E+GAILVFLPG +IN +RL A+ FR S
Sbjct: 857 KYIASA---VVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASG 913
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
++PLHS + S +QKKVF RPP G RK+I++TNIAET+ITI+DVVYVIDSG+ KE Y+
Sbjct: 914 DWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYN 973
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD-FQVPEIKRIPIE 711
P+ +S++ WVSKA+A+QR GRAGR + G C+ LY++ R L +QVPE+ R+P+
Sbjct: 974 PHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLV 1033
Query: 712 ELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
ELCL +KLL I+ FL K L+PP I +AI++L +GAL DE++T LG L L
Sbjct: 1034 ELCLHIKLLGLG-QIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKL 1092
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLAC-ASDYRDPFTLPISPNEKKRATAA----KFELA 826
V L+ KML + + CL P L++A S + PF R A K E +
Sbjct: 1093 PVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESS 1152
Query: 827 SLYGG---QSDQLAVIAAFECW-KNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQT 880
S QSD L ++ A+E W + ++G +A FC F++S VM M+ R +
Sbjct: 1153 SNLNNNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGM 1212
Query: 881 ELIKNGFI--PEDVSSCSHNARV---------------PGIIHAVLMAGLYPMVA----- 918
L G I P+ N V P ++ A+L AGL P +A
Sbjct: 1213 LLADIGLINLPKGKGRRKENFDVWFSDKTQPFNMYSQEPEVVKAILCAGLCPNIAEGLVN 1272
Query: 919 RLRPPHKNGRRF-VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRN 977
RL P + +R+ V G +V +H +S+N K P +V+ E +++++
Sbjct: 1273 RLTKPAEETQRYAVWHDGKREVHIHRNSINKNC---KAFQYPFIVFLEKLETKKVVYLQD 1329
Query: 978 CTVVGPLPLLLLATEIAV 995
TVV P +LL I V
Sbjct: 1330 TTVVSPFSILLFGGSINV 1347
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 149/248 (60%), Gaps = 32/248 (12%)
Query: 159 AEIAMKVESLTSRIEKDANLRQ---IVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+ +A + SL + E +++ +++ R+ LPIS K I + V+++ GETG
Sbjct: 565 SSMAAECSSLKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGS 624
Query: 216 GKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIG--DN--IGY 269
GKTTQVPQF+L+ + G C I+CTQPR A +VA+R++ ER E DN + Y
Sbjct: 625 GKTTQVPQFILDDMIDSGHGGYCNIICTQPR---AITVAQRVADERCEPPPGFDNSVVAY 681
Query: 270 KIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHER 329
++R ++ + ++FCT G+LLR LV G + LK+ +THIIVDE+HER
Sbjct: 682 QVRHQNARSDKTRLLFCTTGILLRKLV--GDTTLKD------------VTHIIVDEVHER 727
Query: 330 DRYSDFMLAIIRDMLP------SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPV 383
DF+L I++ ++ + P L++ILMSAT+DA +FS+YFG CP+I G T+PV
Sbjct: 728 SLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPV 787
Query: 384 KSFYLEDV 391
+++LED+
Sbjct: 788 TTYFLEDI 795
>gi|254939654|ref|NP_001157231.1| putative ATP-dependent RNA helicase DHX57 isoform 1 [Mus musculus]
gi|94710282|sp|Q6P5D3.2|DHX57_MOUSE RecName: Full=Putative ATP-dependent RNA helicase DHX57; AltName:
Full=DEAH box protein 57
gi|40787832|gb|AAH65169.1| Dhx57 protein [Mus musculus]
Length = 1388
Score = 290 bits (741), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 314/573 (54%), Gaps = 93/573 (16%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHM-----ENALSDSMKQQLLD----------- 532
+LKA+ RTA Q EV + ++ + E ++ D++ Q LD
Sbjct: 761 KLKARHNRTA--------QEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGV 812
Query: 533 -----KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLA 583
K ++ ++ E ++L LIE LL I +D + GA+LVFLPG +I ++L +
Sbjct: 813 SKSVIKTMSVMDFEKVNLELIEALLEWI-VDGKHAYPPGAVLVFLPGLAEIKMLYEQLQS 871
Query: 584 NPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
N F R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVI
Sbjct: 872 NSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVI 931
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDF 700
DSG+MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L
Sbjct: 932 DSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQ 991
Query: 701 QVPEIKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
Q+PEI+R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ D
Sbjct: 992 QLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPD 1051
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
EK+T LG L L V + K++ + CLDPALT+A + ++ PF P ++K+ A
Sbjct: 1052 EKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEA 1109
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRK 876
K E A SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++
Sbjct: 1110 NQKKLEFAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKR 1166
Query: 877 QLQTELIKN-GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYP 915
Q TEL+ + GF+ E + + + NA P +I AVL A LYP
Sbjct: 1167 QF-TELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYP 1225
Query: 916 MVARLRPPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDD 957
V +++ P +F +T+ G V +HP S+N+++ + D
Sbjct: 1226 NVVQVKTPEG---KFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFD 1279
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P ++Y E + + +R+C++V PL+L
Sbjct: 1280 SPYLLYHEKIK-TSRVFIRDCSMVSVYPLVLFG 1311
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 144/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L++ + I
Sbjct: 538 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 597
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 598 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 655
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ L++ILMSAT
Sbjct: 656 GDATLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 703
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LDA FS+YF CPVI +PG +PV F+LED L++ +
Sbjct: 704 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTR 741
>gi|145348092|ref|XP_001418490.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578719|gb|ABO96783.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1041
Score = 290 bits (741), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 268/488 (54%), Gaps = 28/488 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ ++ +ID LIE+LL + ++DGA+LVFLPG ++ DRL ++P F+D V
Sbjct: 494 LSRLDESVIDYDLIEELLAYVDDVTDDGAVLVFLPGIGEVTGLLDRLASSPRFKDA---V 550
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
+ PLHS + + +Q++ F+ P PG RKI+++TN+AET++TI+D+V VIDSGR+KE+ +DP
Sbjct: 551 LTPLHSALTNAEQREAFRVPKPGVRKIVVATNVAETSVTIEDIVVVIDSGRVKERQWDPR 610
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEEL 713
+++L+ WVS+A+AKQRAGRAGR +AG CY L++ RA ++ FQVPE+ R P+ E+
Sbjct: 611 RGMASLEEGWVSRAAAKQRAGRAGRVRAGTCYALFTSHRANGAMRPFQVPEMHRAPLTEV 670
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ+ LD + + L +PP + A L +IGA ++T LG L L V
Sbjct: 671 VLQIASLDLHSDAAVVLGNAPEPPKEEAVAAAKKTLTEIGAFDELGRLTALGRHLAALPV 730
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEK----KRATAAKFELASLY 829
++KML F +++ CL P LT+A Y+ PF + N + RA A ++
Sbjct: 731 DARVAKMLLFGVILRCLSPILTIAATLSYKSPFQSSKASNSQVEAAMRAFAQPAAVSLAA 790
Query: 830 GGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
G QSD L V+AA++ + A + + A F + + M + MR Q L G
Sbjct: 791 GQQSDHLVVVAAYDGYIEASKESRNAGRRFAQKNALDVDTMRQISEMRTQYAALLADMGV 850
Query: 888 I--PEDVS--------------SCSHNARVPGIIHAVLMAGLYPMVA-RLRPPHKNGRRF 930
I P S + + +AR +I AVL AGLY VA ++ ++
Sbjct: 851 IRVPAGYSLRGRNTNWLDDPKAAWNKDARRVQMIKAVLTAGLYANVAVGDEASDQDYAQY 910
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
++VR+HP S+N + + P MVY E R +++R+CTVV P LLL
Sbjct: 911 TWKDATSEVRVHPSSVNKGIGIDRKPAYPFMVYHEKMR-TARVYLRDCTVVAPEALLLFG 969
Query: 991 TEIAVAPA 998
+ V A
Sbjct: 970 GNLEVQHA 977
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 156/257 (60%), Gaps = 27/257 (10%)
Query: 152 CKPKMSK-AEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS 210
+ M+K AE++ +++ ++D +++ +RS LPI + D + + S+ V++
Sbjct: 174 ARANMNKHAEVSRRLKEHLEATKQDPQWKKLFAKRSTLPICALADELLDRLRSHDAVVVC 233
Query: 211 GETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGE--NIGDN 266
GETGCGKTTQVPQFLL+ + G C IVCTQPRR++ATS+AER+S ER E +G N
Sbjct: 234 GETGCGKTTQVPQFLLDDAIEREQGGACNIVCTQPRRVAATSIAERVSAERCEKNGVGGN 293
Query: 267 ---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIV 323
+G+ +RL++K + + FCT G+LLR L QG L + +TH++V
Sbjct: 294 GSLVGHHVRLDAKITSATRLTFCTTGILLRRL--QGDRMLTD------------VTHVVV 339
Query: 324 DEIHERDRYSDFMLAIIRDML-----PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPG 378
DE+HER DF+L ++RD+ P ++L+LMSATL+A FS+Y GG PVI PG
Sbjct: 340 DEVHERSLDGDFLLTLLRDLPRRRREAGLPPVKLVLMSATLNAALFSEYLGGSPVISAPG 399
Query: 379 FTYPVKSFYLEDVLSIL 395
++PV + +LE + L
Sbjct: 400 RSFPVDTIHLEHIYDTL 416
>gi|350402556|ref|XP_003486528.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Bombus
impatiens]
Length = 977
Score = 289 bits (740), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 257/449 (57%), Gaps = 12/449 (2%)
Query: 503 EQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDG 562
EQ + E ++ ++ ++ + + + L N E + L LIEQL+R IC ++ G
Sbjct: 403 EQRKRDEFHDVLYPYVRQLIATKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTNDPG 462
Query: 563 AILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
AILVFLPG DI K +L N + +++VI PLHS +P+V QK VFK PP G RKII
Sbjct: 463 AILVFLPGMMDIIKLHKIMLENRQY-PQNQYVIYPLHSRMPTVDQKLVFKTPPEGVRKII 521
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQA 682
++T+IAET+ITI+DVVYV+D G+MK +D NV TL+ WVS A+AKQR GRAGR +
Sbjct: 522 IATSIAETSITIEDVVYVVDCGKMKFGKFDLQKNVQTLEPEWVSLANAKQRRGRAGRVRP 581
Query: 683 GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTI 742
G+CYHLYS+ R +L + +PE+ R +EE+ LQ+K+L FL +DPP I
Sbjct: 582 GVCYHLYSKAREMALDQYPLPEMLRTRLEEVILQIKMLQLG-KARTFLASVMDPPNMKAI 640
Query: 743 RNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDY 802
++ +L+ + AL +E++T LG L L + P KM+ +A L C++P +A + +
Sbjct: 641 DLSLDLLRTLNALDDEEQLTPLGYHLAQLPLDPRTGKMIIWASLFSCVEPVFAIAASLSF 700
Query: 803 RDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYF 862
+D F P+ E R + + SD +A+ A ++ A ++ + FC +YF
Sbjct: 701 KDAFYCPLGKEEDARKKKLELNMNQF----SDHIALSEALRRFEIAYKKSYASSFCREYF 756
Query: 863 VSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVA 918
+S + +L M+ Q L + F+ P D+++ +++ + ++ AV+ A LYP +A
Sbjct: 757 LSFSTLKLLSEMKTQFAQHLCRMKFMDSENPADINANRNSSNI-TLVKAVVCAALYPNIA 815
Query: 919 RLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+R KNG R G+ V +HP S+N
Sbjct: 816 VIRRVTKNGTRAWTPEDGS-VTIHPSSVN 843
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 148/221 (66%), Gaps = 20/221 (9%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GE 234
N++Q R KLP + I + NQV++ISGETGCGKTTQV Q++L+ + G
Sbjct: 175 NMKQF---RLKLPSYHKRSKILDLIKENQVIVISGETGCGKTTQVAQYILDDQIEQENGS 231
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLR 293
+I+CTQPRRISA SVAER++ ER E +G ++G++IRLE + SI FCT G+LL+
Sbjct: 232 IVRIICTQPRRISAISVAERVAAERAERLGKSVGFQIRLEKVLPRDKGSITFCTTGMLLQ 291
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
+ QG LKE S HII+DEIHER SDF+LA+++ ++P P L++I
Sbjct: 292 FM--QGDPALKEFS------------HIILDEIHERSTESDFILALLKLIIPKRPDLKVI 337
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
LMSATL+++RFS Y+ CP+I +PGFTYPV FYLED+LS
Sbjct: 338 LMSATLNSERFSSYYNDCPMIHIPGFTYPVTEFYLEDILSF 378
>gi|41946845|gb|AAH66091.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Mus musculus]
Length = 1335
Score = 289 bits (740), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 314/573 (54%), Gaps = 93/573 (16%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHM-----ENALSDSMKQQLLD----------- 532
+LKA+ RTA Q EV + ++ + E ++ D++ Q LD
Sbjct: 708 KLKARHNRTA--------QEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGV 759
Query: 533 -----KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLA 583
K ++ ++ E ++L LIE LL I +D + GA+LVFLPG +I ++L +
Sbjct: 760 SKSVIKTMSVMDFEKVNLELIEALLEWI-VDGKHAYPPGAVLVFLPGLAEIKMLYEQLQS 818
Query: 584 NPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
N F R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVI
Sbjct: 819 NSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVI 878
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDF 700
DSG+MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L
Sbjct: 879 DSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQ 938
Query: 701 QVPEIKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
Q+PEI+R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ D
Sbjct: 939 QLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPD 998
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
EK+T LG L L V + K++ + CLDPALT+A + ++ PF P ++K+ A
Sbjct: 999 EKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEA 1056
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRK 876
K E A SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++
Sbjct: 1057 NQKKLEFAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKR 1113
Query: 877 QLQTELIKN-GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYP 915
Q TEL+ + GF+ E + + + NA P +I AVL A LYP
Sbjct: 1114 QF-TELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYP 1172
Query: 916 MVARLRPPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDD 957
V +++ P +F +T+ G V +HP S+N+++ + D
Sbjct: 1173 NVVQVKTPEG---KFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFD 1226
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P ++Y E + + +R+C++V PL+L
Sbjct: 1227 SPYLLYHEKIK-TSRVFIRDCSMVSVYPLVLFG 1258
Score = 202 bits (515), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 145/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L++ + I
Sbjct: 485 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 544
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 545 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 602
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ L++ILMSAT
Sbjct: 603 GDATLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 650
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LDA FS+YF CPVI +PG T+PV F+LED L++ +
Sbjct: 651 LDAGLFSKYFSYCPVITIPGRTFPVDQFFLEDALAVTR 688
>gi|254939651|ref|NP_945180.2| putative ATP-dependent RNA helicase DHX57 isoform 2 [Mus musculus]
Length = 1335
Score = 289 bits (740), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 314/573 (54%), Gaps = 93/573 (16%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHM-----ENALSDSMKQQLLD----------- 532
+LKA+ RTA Q EV + ++ + E ++ D++ Q LD
Sbjct: 708 KLKARHNRTA--------QEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGV 759
Query: 533 -----KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLA 583
K ++ ++ E ++L LIE LL I +D + GA+LVFLPG +I ++L +
Sbjct: 760 SKSVIKTMSVMDFEKVNLELIEALLEWI-VDGKHAYPPGAVLVFLPGLAEIKMLYEQLQS 818
Query: 584 NPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
N F R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVI
Sbjct: 819 NSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVI 878
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDF 700
DSG+MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L
Sbjct: 879 DSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQ 938
Query: 701 QVPEIKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
Q+PEI+R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ D
Sbjct: 939 QLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPD 998
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
EK+T LG L L V + K++ + CLDPALT+A + ++ PF P ++K+ A
Sbjct: 999 EKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEA 1056
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRK 876
K E A SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++
Sbjct: 1057 NQKKLEFAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKR 1113
Query: 877 QLQTELIKN-GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYP 915
Q TEL+ + GF+ E + + + NA P +I AVL A LYP
Sbjct: 1114 QF-TELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYP 1172
Query: 916 MVARLRPPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDD 957
V +++ P +F +T+ G V +HP S+N+++ + D
Sbjct: 1173 NVVQVKTPEG---KFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFD 1226
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P ++Y E + + +R+C++V PL+L
Sbjct: 1227 SPYLLYHEKIK-TSRVFIRDCSMVSVYPLVLFG 1258
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 144/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L++ + I
Sbjct: 485 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 544
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 545 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 602
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ L++ILMSAT
Sbjct: 603 GDATLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 650
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LDA FS+YF CPVI +PG +PV F+LED L++ +
Sbjct: 651 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTR 688
>gi|297817698|ref|XP_002876732.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297322570|gb|EFH52991.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1120
Score = 289 bits (739), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 260/461 (56%), Gaps = 14/461 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ I LIE LL IC + G ILVF+ GW+DI+ +++L +P F + + +
Sbjct: 479 LSCWNPDCIGFNLIEFLLCHICENEGPGGILVFMTGWDDISSLKEKLQIHPIFGNPDRVM 538
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F+ P G RKI+L+TNIAET+ITI+DV +VID G+ KE SYD
Sbjct: 539 LLACHGSMASFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDAL 598
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SK SA+QR GRAGR + G CYHLY++ + ++Q+PEI R P+ LC
Sbjct: 599 NNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYAKCVYDAFAEYQLPEILRTPLHSLC 658
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L+ +I +FL + L P + ++ AI L+ IGAL +E +T LG L L +
Sbjct: 659 LQIKSLNLG-SISEFLSRALQSPELLAVQKAIKYLKIIGALDENEYLTTLGRYLSKLPME 717
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML ++ CLDP LT+A RDPF P ++K A AAK + + SD
Sbjct: 718 PKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTP--QDKKDLAEAAKSQFSR---DHSD 772
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A+E WK A++ +C + F+S + + +RK+ + L G I + S
Sbjct: 773 HLALVRAYEGWKKAEEESAVYDYCWRNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSI 832
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAKVRLHPHSLNFKLSFK 953
C+ + AV+ G+YP + + N R F ++T +V L+ +S+N + +
Sbjct: 833 CNSEGNDANLTRAVICYGMYPGICSVV---HNERSFSLKTMEDGQVLLYSNSVNAR---E 886
Query: 954 KTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V++E + + + +R+ T L+L I+
Sbjct: 887 TKIPYPWLVFNEKIKVN-SVFLRDSTACSDSTLILFGGSIS 926
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 157/220 (71%), Gaps = 16/220 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
R++VE R+ LP +D + + + NQV++ISGETGCGKTTQ+PQF+LE ++G C
Sbjct: 218 RRMVESRTSLPAFKQRDSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFC 277
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 278 SIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVRGRDTRLLFCTTGILLRRLL 337
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L I++D+L P L+LI+MS
Sbjct: 338 ---VDR-----------NLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRPELKLIMMS 383
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
ATLDA+ FS YFGG VI +PGFTYPV+S +LED+L + +
Sbjct: 384 ATLDAELFSSYFGGAGVIHIPGFTYPVRSHFLEDILEMTR 423
>gi|332028283|gb|EGI68330.1| Putative ATP-dependent RNA helicase DHX36 [Acromyrmex echinatior]
Length = 958
Score = 289 bits (739), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 258/453 (56%), Gaps = 12/453 (2%)
Query: 503 EQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDG 562
+Q + E I++ ++ +++ + + L N E + L LIE+L+R IC G
Sbjct: 382 QQYKKEEFLDILQPYVRQLMAEKKYETHVIDQLRNPNSENLSLELIEKLVRYICNTKGPG 441
Query: 563 AILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
AIL+FLPG DI+ +L + + + +VI PLHS +P+V QK +FK P G RKII
Sbjct: 442 AILIFLPGMMDISNLNKMMLESGCY-PSHAYVIYPLHSRMPTVDQKLIFKEPSHGIRKII 500
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQA 682
++T+IAET+ITI+DVVYVID G++K +D N+ TL+ WVS A+AKQR GRAGR ++
Sbjct: 501 IATSIAETSITIEDVVYVIDCGKIKYSKFDLNKNIQTLEPEWVSLANAKQRRGRAGRVKS 560
Query: 683 GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTI 742
G CYH+Y++ R + + +PE+ R +EE+ LQ+K+L +++FL +DPP I
Sbjct: 561 GECYHMYTKAREMTFDHYPLPEMLRTRLEEVILQIKILQLG-RVKEFLSTVMDPPDLKAI 619
Query: 743 RNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDY 802
++ +L+ + AL DE +T LG L L + P KM+ + L C+DP +A + +
Sbjct: 620 DLSLDLLETLNALDKDETLTPLGYHLAHLPLDPRTGKMILWGALFSCVDPIFAIAASLTF 679
Query: 803 RDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYF 862
+D F P+ E A K EL+ G SD +A+ A ++ A+QRG FC +YF
Sbjct: 680 KDAFYCPLGQEEI--ANKKKLELSM--GECSDHIALAEALRRYEVARQRGNARQFCREYF 735
Query: 863 VSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVA 918
+S + +L M+ Q L + F+ P + S + N+ +I A++ AGLYP +A
Sbjct: 736 LSFNTLKLLSEMKAQFAQYLCEMKFLDSENPSHIGS-NRNSNNIALIKAIVCAGLYPNIA 794
Query: 919 RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLS 951
+R KNG T VR+HP S+N ++S
Sbjct: 795 VVRRVTKNG-VISWTPEDGSVRIHPSSVNNRVS 826
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 202/353 (57%), Gaps = 53/353 (15%)
Query: 66 KKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILP-SLTFSEGSKLVLQDLFTHYPPD 124
K++GM ++ R KQ++ K E+L S + K +L + +Y P
Sbjct: 36 KEIGMYYRNKNREKQKK-------------KAPEVLKLSFHIQQSIKTMLNNAEKYYNPV 82
Query: 125 DGEPGEKLDANQSRKSDKTRGKR--VDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIV 182
E N+ + T+ KR ++I AM V TS++++++++ +I+
Sbjct: 83 FCTNFESEQDNKYHQFHDTQFKRKFLEIIHGNIQQNLAKAMNV---TSKLQRNSDIDRIL 139
Query: 183 EE-----------------RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
+ R KLP + I ++ NQVV+ISGETGCGKTTQ+ QF+
Sbjct: 140 QNDYRQKHNQDAYNNMLKFRLKLPAYKKRLEILQLIEDNQVVVISGETGCGKTTQIAQFI 199
Query: 226 L--EHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSS 282
L E G +I+CTQPRRISA SVAER+++ER EN+G+++GY+IRLE + + H S
Sbjct: 200 LDDELETGNGSVTRIICTQPRRISAISVAERVAMERAENLGNSVGYQIRLEKQPSRDHGS 259
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
I+FCT G+LL+++ + PA + +H+I+DEIHER SDF++ +++
Sbjct: 260 ILFCTTGILLQIM-----------KHDPA---LKGFSHVILDEIHERTTESDFVITLLKQ 305
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
++ L+++LMSATL+A+ FS+Y+ CP+I +PGFTYPV+ FYLEDVLS +
Sbjct: 306 VILKRTDLKVLLMSATLNAENFSKYYNNCPMIHIPGFTYPVEEFYLEDVLSFI 358
>gi|38614392|gb|AAH62952.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Mus musculus]
Length = 1335
Score = 289 bits (739), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 314/573 (54%), Gaps = 93/573 (16%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHM-----ENALSDSMKQQLLD----------- 532
+LKA+ RTA Q EV + ++ + E ++ D++ Q LD
Sbjct: 708 KLKARHNRTA--------QEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGV 759
Query: 533 -----KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLA 583
K ++ ++ E ++L LIE LL I +D + GA+LVFLPG +I ++L +
Sbjct: 760 SKSVIKTMSVMDFEKVNLELIEALLEWI-VDGKHAYPPGAVLVFLPGLAEIKMLYEQLQS 818
Query: 584 NPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
N F R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVI
Sbjct: 819 NSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVI 878
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDF 700
DSG+MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L
Sbjct: 879 DSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQ 938
Query: 701 QVPEIKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
Q+PEI+R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ D
Sbjct: 939 QLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPD 998
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
EK+T LG L L V + K++ + CLDPALT+A + ++ PF P ++K+ A
Sbjct: 999 EKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEA 1056
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRK 876
K E A SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++
Sbjct: 1057 NQKKLEFAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKR 1113
Query: 877 QLQTELIKN-GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYP 915
Q TEL+ + GF+ E + + + NA P +I AVL A LYP
Sbjct: 1114 QF-TELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYP 1172
Query: 916 MVARLRPPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDD 957
V +++ P +F +T+ G V +HP S+N+++ + D
Sbjct: 1173 NVVQVKTPEG---KFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFD 1226
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P ++Y E + + +R+C++V PL+L
Sbjct: 1227 SPYLLYHEKIK-TSRVFIRDCSMVSVYPLVLFG 1258
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 144/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L++ + I
Sbjct: 485 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 544
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 545 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 602
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ L++ILMSAT
Sbjct: 603 GDATLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 650
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LDA FS+YF CPVI +PG +PV F+LED L++ +
Sbjct: 651 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTR 688
>gi|307169079|gb|EFN61923.1| Probable ATP-dependent RNA helicase DHX36 [Camponotus floridanus]
Length = 962
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 257/450 (57%), Gaps = 22/450 (4%)
Query: 507 QPEVAQIIK--KHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAI 564
QP + Q+ K+ E+ LS+ L N E + L LIE+L+R IC + + GAI
Sbjct: 405 QPYIQQLRAEVKYAEHVLSE----------LRNPNSENLSLELIEKLVRYICNNKQPGAI 454
Query: 565 LVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILS 624
L+FLPG DI++ +L + + +K++I PLHS +P++ QK +FK PP RKII++
Sbjct: 455 LIFLPGMMDISQLNKMMLESGCY-PPNKYIIYPLHSRMPTIDQKLIFKEPPDDIRKIIIA 513
Query: 625 TNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGI 684
T+IAET+ITI+DVVYVID G+ K +D +N+ TL WVS A+AKQR GRAGR ++G
Sbjct: 514 TSIAETSITIEDVVYVIDCGKTKLGRFDIAHNIQTLNPEWVSLANAKQRRGRAGRVKSGE 573
Query: 685 CYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRN 744
CYHLYS+ R + + +PE+ R +EE+ LQ+K+L ++FL +DPP I
Sbjct: 574 CYHLYSKAREMTFDQYPLPEMLRTRLEEVILQIKMLQLG-KAKEFLASIMDPPDLKAIDL 632
Query: 745 AIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRD 804
++ +L+ + AL +E +T LG L L + P KM+ +A L C++P +A + ++D
Sbjct: 633 SLNLLRTLNALDEEEHLTPLGYHLAHLPLDPRTGKMILWAALFSCVEPIFAIAASLTFKD 692
Query: 805 PFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVS 864
F P+ E+ A K EL+ G SD +A+ A ++ A++RG FC +YF+S
Sbjct: 693 AFYCPLGKEEE--ANKKKLELSM--GEYSDHIALAEALRRFEVARRRGNAGQFCREYFLS 748
Query: 865 SGVMNMLLGMRKQLQTELIKNGFIPEDV---SSCSHNARVPGIIHAVLMAGLYPMVARLR 921
+ +L M+ Q L + F+ D + + N+ +I ++ AGLYP +A +R
Sbjct: 749 FNTLKLLSEMKIQFAQYLYEMKFLNSDNPGDKNANRNSNNVALIKTIVCAGLYPNIAVIR 808
Query: 922 PPHKNGRRFVETAGGAKVRLHPHSLNFKLS 951
KNG F T VR HP S+N K S
Sbjct: 809 RASKNG-IFSWTPEDGSVRTHPSSVNCKAS 837
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 152/223 (68%), Gaps = 17/223 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGE 234
N +++ R KLP+ K I + NQV++ISGETGCGKTTQ+ QF+L+ G
Sbjct: 160 NYLNMLKFRQKLPVYHKKSEILQLIKDNQVIVISGETGCGKTTQIAQFILDDQLEAGNGS 219
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLR 293
+I+CTQPRRISA SVAER++ ER E +G ++GY+IRLE + SI+FCT G+LL+
Sbjct: 220 ITRIICTQPRRISAISVAERVAAERTEKLGKSVGYQIRLEKIPTREQGSILFCTTGILLQ 279
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
++ + PA D S H+I+DEIHER SDF++ +++ ++P L+++
Sbjct: 280 IMKTD-----------PALKDFS---HVILDEIHERTTESDFIITLLKQVIPKRTDLKIL 325
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LMSATL+++RFS+Y+ CP+I +PGFTYPV+ FYLEDVLS+++
Sbjct: 326 LMSATLNSERFSKYYNECPMIHIPGFTYPVQEFYLEDVLSLIQ 368
>gi|224000748|ref|XP_002290046.1| hypothetical protein THAPSDRAFT_268812 [Thalassiosira pseudonana
CCMP1335]
gi|220973468|gb|EED91798.1| hypothetical protein THAPSDRAFT_268812 [Thalassiosira pseudonana
CCMP1335]
Length = 791
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/488 (38%), Positives = 268/488 (54%), Gaps = 40/488 (8%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ V+ +++ LI +LL+ IC EDGAIL FLPG ++I + L+ +F+D+S +
Sbjct: 246 LSVVDESIVNYELIGELLKYICTSLEDGAILCFLPGMKEITTAMEGLMKLEYFQDSSNAI 305
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I PLHS + + +QK +F RP G RKI+LSTNIAET+ITIDDVV+V+D+GR+KE YD
Sbjct: 306 IYPLHSSLSNEEQKAIFSRPLAGKRKIVLSTNIAETSITIDDVVFVVDAGRVKENRYDDL 365
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS-QLRAASLPDFQVPEIKRIPIEEL 713
N + TL WVSKASAKQR GRAGR + G C+HLYS L D+Q+PE+ R+ +E+L
Sbjct: 366 NRMPTLMECWVSKASAKQRRGRAGRVKPGYCWHLYSTHTHDNELVDYQLPEMLRVGLEDL 425
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGA-----------------LS 756
LQ+ +LD FL K ++PP + I+NA+ +L+ +GA L+
Sbjct: 426 VLQILVLDLG-EPAVFLTKAVNPPTDLAIKNALQLLESLGAAECDWEGNDEMNTESSDLT 484
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
+ +T LG L L VHP + KM+ + L D LT+A A R+PF S + +
Sbjct: 485 VSTSLTALGYHLATLPVHPRVGKMMIYGSLFGVFDACLTIAAAMTSRNPFI--SSFDNRV 542
Query: 817 RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR-GQEA-WFCSQYFVSSGVMNMLLGM 874
A AK AS D +AV+ AF W+ KQ+ G+ A F F+S +N +L +
Sbjct: 543 AADEAKRGFAS-----DDHIAVLLAFNQWRELKQKDGRMARTFLRDNFLSHIGLNNMLQL 597
Query: 875 RKQLQTELIKNGF-IP---EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
RKQL+ + GF IP ++ S + ++ AVL AGLYP + + P G+
Sbjct: 598 RKQLEKYMSDIGFSIPIGNNQWNNISIESNDMFLVRAVLAAGLYPNII-VSPKSFTGKTA 656
Query: 931 VETAGGAK---VRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
E A + V LHP ++ F K D Y EI + ++VR+C V LL
Sbjct: 657 GEVAFRGQMGEVYLHPCTIAFT---AKELDSRYCCYHEIMK-TSKVYVRDCCTVPKFALL 712
Query: 988 LLATEIAV 995
L + V
Sbjct: 713 LFGGALKV 720
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 145/216 (67%), Gaps = 16/216 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKI 238
++ +R KLP KD + T+ +NQV +ISG+TGCGKTTQVPQ +L+ + ++G +
Sbjct: 1 MLSQRIKLPAYKMKDKVLETIRANQVTVISGDTGCGKTTQVPQLVLDDLILSNRGSEANV 60
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+ TQPRRISA V+ERI+ ER E IG+ +GY IRLES+ + ++ CT GVLLR L
Sbjct: 61 IVTQPRRISAIGVSERIAAERCERIGETVGYSIRLESRRSAKTRLLLCTTGVLLRRL--- 117
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
D+++++H+ VDE+HERD +DFML I++++L P L+L+LMSAT
Sbjct: 118 -----------QVDPDLASVSHVFVDEVHERDLNTDFMLIILKELLQRRPSLKLVLMSAT 166
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+A+RFS++FGGCP + +PG PV+ + LED L +
Sbjct: 167 LNAERFSEFFGGCPTVSIPGRAQPVQEYRLEDALEV 202
>gi|357515767|ref|XP_003628172.1| Helicase associated domain family protein expressed [Medicago
truncatula]
gi|355522194|gb|AET02648.1| Helicase associated domain family protein expressed [Medicago
truncatula]
Length = 628
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 264/489 (53%), Gaps = 22/489 (4%)
Query: 514 IKKHMENALSDSMKQQL---LDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+ +E ALS S L P I LIE +L IC GA+LVF+ G
Sbjct: 65 LKRELEGALSKSTFANYSPNTRSSLYNWKPHCIGFKLIEAVLCHICRKERPGAVLVFMTG 124
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W+DI++ RD L + D +I H ++ + +QK +F +PPP RKI+L+TN+AE
Sbjct: 125 WKDISRLRDGLQNHHLLGDRKSVLIQTCHGLMETFEQKLIFDKPPPNVRKIVLATNVAEA 184
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V++ID G+ E SYD NN L SW+S+ASA+QR GRAG Q G CYHLY
Sbjct: 185 SITINDIVFIIDCGKTNESSYDALNNTPCLLPSWISQASARQRRGRAGHVQPGECYHLYP 244
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ + ++Q+PEI R P+ LCLQ+K L +I FL L+ P ++NAI L
Sbjct: 245 KCVYEAFSEYQLPEILRTPLNSLCLQIKSLQVE-SIGKFLSSALEAPDPRAVQNAIEFLT 303
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPI 810
IGAL DE +T LG+ L L V P + KML + C DP LT+ RDPF +
Sbjct: 304 TIGALDEDENLTNLGKVLSILPVDPKLGKMLIMGAIFRCFDPVLTIVSVLSVRDPFLMLQ 363
Query: 811 SPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNM 870
+E KRA ++F A+ Y SD + + A+E WK+AK+ + +C + F+SS ++
Sbjct: 364 DKSELKRA-KSRFS-ANDY---SDHMVFVRAYEGWKDAKRERSDYNYCWRNFLSSQTLHE 418
Query: 871 LLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
+ +RKQL + L + G + D S ++ + ++ AV+ +GL+P +A + +
Sbjct: 419 IHSIRKQLSSILKETGLLDTDASINNNLSIDQSLVRAVICSGLFPCIASV------NQES 472
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
++T V L ++ K+T P +V++E + + +R+ T V L L+L
Sbjct: 473 IKTMDDGYVLL------ISVNSKQTIPYPWLVFNEKVKIKQVL-IRDSTGVSDLMLILFG 525
Query: 991 TEIAVAPAP 999
++ P
Sbjct: 526 GALSNGKQP 534
>gi|363731500|ref|XP_424198.3| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Gallus gallus]
Length = 1375
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 291/508 (57%), Gaps = 63/508 (12%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF-- 587
K ++ ++ + ++L LIE LL I GA+L+FLPG +I ++L +N F
Sbjct: 804 KTMSVMDLDKVNLELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNN 863
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
R + + V+ PLHS + S +Q+ VF RPP G KII+STNIAET++TIDDVVYVIDSG+MK
Sbjct: 864 RHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMK 923
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIK 706
EK YDP + +L+ ++VS+A+A QR GRAGR +G+C+HL+S L Q+PEI+
Sbjct: 924 EKRYDPSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQ 983
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E+LCL++K+L+ ++ L + ++PP + ++R + + LQD+GAL+ DEK+T L
Sbjct: 984 RVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPL 1043
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V + K++ F + CLDPALT+A + ++ PF P ++++ A K +
Sbjct: 1044 GYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPW--DKREEANKKKLD 1101
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTEL 882
A G SD LA++ A++ W+ + + G +A +C + F+S V+ + +++Q TEL
Sbjct: 1102 FAV---GNSDYLALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQF-TEL 1157
Query: 883 IKN-GFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYPMVARL 920
+ + GF+ E + + + NA +I A+L A LYP V ++
Sbjct: 1158 LSDIGFVKEGLRARDIERKWSQGGDGVLDATGEEANSNAENFKLISAMLCAALYPNVVQV 1217
Query: 921 RPPHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMV 962
+ P ++ +T+ GA V +HP S+N++ + + P +V
Sbjct: 1218 KKPEG---KYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQ---TRHFESPYLV 1271
Query: 963 YDEITRGDGGMHVRNCTVVGPLPLLLLA 990
Y E + + +R+C++V PL+LL
Sbjct: 1272 YHEKIK-TSRVFIRDCSMVSVYPLVLLG 1298
Score = 210 bits (534), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 153/229 (66%), Gaps = 17/229 (7%)
Query: 171 RIEKDAN-LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
R++K + + ++ ER KLP ++ I + S+QV+++SG TGCGKTTQ+PQF+L+
Sbjct: 515 RLKKSSRRFQSMLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDAS 574
Query: 230 W--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
S I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT
Sbjct: 575 LQGSPNAVANIICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCT 634
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L +G L+ +TH+IVDE+HER SDF+L +++D++
Sbjct: 635 TGVLLRRL--EGDLTLQ------------GITHVIVDEVHERTEESDFLLLVLKDIMVQR 680
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
P LR+ILMSATL+A+ FSQYF CP+I +PG T+PV F+LEDV+++ +
Sbjct: 681 PDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVIAMTR 729
>gi|218193752|gb|EEC76179.1| hypothetical protein OsI_13511 [Oryza sativa Indica Group]
Length = 1150
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/489 (34%), Positives = 274/489 (56%), Gaps = 24/489 (4%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + + D++K + Y L+ NP+ I LIE +L IC GA+LVF
Sbjct: 472 KNQITTLVEDALKTSSFETYGSRTRDSLSNWNPDCIGFNLIEAVLCHICRKERSGAVLVF 531
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DI+ +D+L A+P D ++ +++ H + + +Q+ +F++PPP RKI+L+TN+
Sbjct: 532 MTGWDDISCLKDQLKAHPLLGDPNRVLLLACHGSMATAEQRLIFEKPPPNVRKIVLATNM 591
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AE +ITI+D+V+V+D G+ KE +YD NN L SW+SKASA+QR GRAGR Q G CYH
Sbjct: 592 AEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISKASARQRRGRAGRVQPGECYH 651
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY + + D+Q+PE+ R P+ LCLQ+K L +I +FL L PP + ++NA+
Sbjct: 652 LYPRCVYDAFADYQLPELLRTPLNSLCLQIKSLQVG-SIGEFLSAALQPPAPLAVQNAVE 710
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGAL +E +T+LG L L V P + KML + C+DP LT+ RDPF
Sbjct: 711 FLKMIGALDENENLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILTVVAGLSARDPFL 770
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
LP +++ A AK ++ SD +A++ A+E WK+A++ G +C + F+S+
Sbjct: 771 LP--QDKRDLAGTAKSRFSA--KDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQT 826
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDV---SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
+ + +RKQ L G + D +S SHN ++ ++ +GL+P + + H
Sbjct: 827 LQAIHSLRKQFSYILKDAGLVDSDANTNNSLSHNQ---SLVRGIICSGLFPGITSV--VH 881
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPL 984
+ +T +V L+ +S+N K +T P +V+ E + + + +R+ T V
Sbjct: 882 RENSMSFKTMDDGQVLLYANSVNAKY---QTIPYPWLVFGEKVKVN-AVFIRDSTGVSDS 937
Query: 985 PLLLLATEI 993
L+L +
Sbjct: 938 ILILFGGAV 946
Score = 221 bits (564), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 160/229 (69%), Gaps = 18/229 (7%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETCK 237
+++E R LP K+ + + + NQV++ISGETGCGKTTQ+PQF+LE I S +G C
Sbjct: 238 KMLEFRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCN 297
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I+CTQPRRISA +VAER+S ERGEN+G+++GYK+RLE GK + ++FCT+G+LLR L+S
Sbjct: 298 IICTQPRRISAMAVAERVSTERGENLGESVGYKVRLEGIKGKDTHLLFCTSGILLRRLLS 357
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+++ +TH+ VDEIHER DF+L +++D+L LRLILMSA
Sbjct: 358 D--------------RNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLSRRRDLRLILMSA 403
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--SILKSAESNHLD 404
TL+A+ FS YFGG P I +PGFTYPV++ +LED+L + K SN LD
Sbjct: 404 TLNAELFSSYFGGAPTIHIPGFTYPVRAHFLEDILERTGYKLTSSNQLD 452
>gi|432114051|gb|ELK36098.1| Putative ATP-dependent RNA helicase DHX57 [Myotis davidii]
Length = 1403
Score = 287 bits (735), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 194/588 (32%), Positives = 315/588 (53%), Gaps = 99/588 (16%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + + +A+ D +QLL +Y ++
Sbjct: 752 KLKARRSRTAFEEVEEDLRLSLHLQDQDSVRDAVPDQQLDFKQLLARYKGVSKSVIKTMS 811
Query: 537 TVNPELIDLVLIEQLLRKI--------------------------CMDS--EDGAILVFL 568
++ E ++L LIE LL I C++ GAILVFL
Sbjct: 812 IMDFEKVNLELIEALLEWIVEGKHSYPPGASPENHRCQVTAARYSCIECLPPGGAILVFL 871
Query: 569 PGWEDINKTRDRLLANPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTN 626
PG +I ++L +N F R + + V+ PLHS + S +Q+ VF +PP G KII+STN
Sbjct: 872 PGLAEIKMLYEQLQSNSLFNNRRSYRCVVHPLHSSLSSEEQQAVFIKPPVGVTKIIISTN 931
Query: 627 IAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICY 686
IAET+ITIDDVVYVIDSG+MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+
Sbjct: 932 IAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCF 991
Query: 687 HLY-SQLRAASLPDFQVPEIKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIR 743
HL+ S + L Q+PEI+R+P+E+LCL++K+L+ N++ + ++PP ++R
Sbjct: 992 HLFTSHHFSHQLLKQQLPEIQRVPLEQLCLRIKILEMFNTHNLQSVFSRLIEPPHPDSLR 1051
Query: 744 NAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYR 803
+ I L+D+GAL+ DEK+T LG L L V + K++ F + CLDPALT+A + ++
Sbjct: 1052 ASKIRLRDLGALTTDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFK 1111
Query: 804 DPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQY 861
PF P ++K+ A K E A SD LA++ A++ W+ + + G +C Q
Sbjct: 1112 SPFVSPW--DKKEEANQKKLEFAF---ANSDYLALLQAYKGWQLSLKEGMRTSYNYCRQN 1166
Query: 862 FVSSGVMNMLLGMRKQLQTELIKN-GFIPEDVSS--------------------CSHNAR 900
F+S V+ + +++Q TEL+ + GF E + + + NA
Sbjct: 1167 FLSGRVLQEMASLKRQF-TELLSDIGFAKEGLRAREIEKRALGGDGILEATGEEANSNAE 1225
Query: 901 VPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA------------------KVRLH 942
P +I A+L A LYP V +++ P +F +T+ GA V +H
Sbjct: 1226 NPKLISAMLCAALYPNVVQVKSPEG---KFQKTSTGAVRMQPKSDELKFVTKNDGYVHIH 1282
Query: 943 PHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P S+N+++ + D P ++Y E + + +R+C++V PL+L
Sbjct: 1283 PSSVNYQV---RHFDSPYLLYHEKIK-TSRVFIRDCSMVSVYPLVLFG 1326
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + +QV++ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 526 FQSILQERQSLPAWEERETILKLLSKHQVLVISGMTGCGKTTQIPQFILDESLNGPPEKV 585
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 586 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 645
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ +THIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 646 --EGDTALQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILM 691
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 692 SATLNAELFSEYFSSCPVITIPGRTFPVDQFFLEDAIAVTR 732
>gi|417413774|gb|JAA53199.1| Putative deah-box rna helicase, partial [Desmodus rotundus]
Length = 1332
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 185/485 (38%), Positives = 270/485 (55%), Gaps = 41/485 (8%)
Query: 535 LATVNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L +NP+ ++L LI +LL R + +GA+L+FLPG I + D L A+ F +
Sbjct: 799 LLYMNPQKVNLDLIVELLAHLDRSPQFRNTEGAVLIFLPGLAHIQQLYDLLSADRRF-SS 857
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE
Sbjct: 858 ERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENK 917
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
Y + +S+L ++VSKASA QR GRAGR + G+C+ +Y++ R D+ VPEI R+P+
Sbjct: 918 YHESSQMSSLVETFVSKASALQRQGRAGRVRDGVCFRMYTRERFEGFMDYSVPEILRVPL 977
Query: 711 EELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGE 766
EELCL + C++ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+
Sbjct: 978 EELCLHIM----KCSLGSPEDFLSKALDPPQPQVISNAMHLLRKIGACELNEPKLTPLGQ 1033
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L V+ + KML F + CLDP TLA + PFT PI K+ A AK A
Sbjct: 1034 HLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPI--GRKEEADLAK---A 1088
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
+L SD L + A+ WK A+Q G E +C ++F+S + L ++++L +
Sbjct: 1089 ALAVADSDHLTIYRAYLGWKKARQEGGYRSEMAYCRRHFLSRTSLLTLEDVKQELIKLVR 1148
Query: 884 KNGFIPE--------DVSSCSHNARVPGIIHAVLMAGLYPMVARL---RPPHKNGRR--F 930
GF P D ++ + + + ++ AVL AGLY V R+ + R
Sbjct: 1149 AAGFSPSAPADSWEGDKAAQALSFQEVALLKAVLAAGLYDNVGRIICAKSVDATERLACV 1208
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
VETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1209 VETAQG-KAQVHPSSVNRALQTHG-----WLLYQEKVRY-ARVYLRETTLISPFPVLLFG 1261
Query: 991 TEIAV 995
+I V
Sbjct: 1262 GDIEV 1266
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 159/252 (63%), Gaps = 24/252 (9%)
Query: 151 FCKPKMS--KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVL 208
F P + KAE V SL +++ +++++ER +LP+ +D I + ++VV+
Sbjct: 495 FTAPPLESEKAEDLEPVRSLFRKLQSTPKYQRLLQERRQLPVFKHRDSIVRALKRHRVVV 554
Query: 209 ISGETGCGKTTQVPQFLLEHIW---SKGETCKIVCTQPRRISATSVAERISVERGENIGD 265
++G+TG GK+TQVP FLLE + S C IVCTQPRRISA S+A R+ E G + G
Sbjct: 555 VAGDTGSGKSTQVPHFLLEDLLLTESGTSKCSIVCTQPRRISAVSLATRVCDELGCDSGP 614
Query: 266 N-----IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTH 320
GY+IR+ES+ G+ + +++CT GVLLR L G+ +S+++H
Sbjct: 615 GGRSSLCGYQIRMESRAGEATRLLYCTTGVLLRRLQDDGL--------------LSSVSH 660
Query: 321 IIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFT 380
+IVDE+HER SDF+L I++++L L LILMSAT+D+D+FS YF CPV+++ G +
Sbjct: 661 VIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPVLRISGRS 720
Query: 381 YPVKSFYLEDVL 392
YPV+ FYLED++
Sbjct: 721 YPVEVFYLEDII 732
>gi|405968395|gb|EKC33469.1| Putative ATP-dependent RNA helicase DHX57 [Crassostrea gigas]
Length = 1384
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 280/508 (55%), Gaps = 63/508 (12%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF- 587
K L+ ++ + I+ LI +L+ I +D E GA+LVFLPG+ +I + + L ++ F
Sbjct: 813 KALSMMDLDKINYDLILELMEWI-VDGEHQFPLGAVLVFLPGFAEIQQLYEALTSHKVFG 871
Query: 588 -RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
R +F IIPLHS + S Q VF +PP G KI+L+TNIAET+ITIDD+ +VID+G+M
Sbjct: 872 ARSGGRFKIIPLHSTLSSEDQHAVFLKPPEGVTKIVLATNIAETSITIDDITFVIDAGKM 931
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEI 705
KEK YD + +L + WVS+A+A QR GRAGR +G+C+HL+++ R L + +PEI
Sbjct: 932 KEKRYDSCKGMESLDTVWVSRANALQRRGRAGRVASGVCFHLFTRHRFDYHLQEQPIPEI 991
Query: 706 KRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
+R P+E++ L++K+LD ++++ L++ +PP + A+ LQD+GAL ++++T
Sbjct: 992 QRAPLEQISLRIKMLDIFKKVHVQEVLEQLPEPPAEESTLAALKRLQDLGALDENDELTP 1051
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG LG L V + K++ F + CLDPALT+A Y+ PF P +++ A K
Sbjct: 1052 LGYHLGSLPVDVRIGKLMLFGAIFRCLDPALTIAATLSYKSPFVSPF--DKRDEADKKKL 1109
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQ-EAW-FCSQYFVSSGVMNMLLGMRKQLQTE 881
E A G SD L ++ A++ W A+ R E + FC Q F+SS + ML M++Q
Sbjct: 1110 EFAV---GNSDHLTMLNAYKGWIEARMRSHNEGYKFCFQNFLSSKSLQMLASMKQQFVEL 1166
Query: 882 L-----IKNGFIPEDVSSCSHNAR-----VPGI-----------IHAVLMAGLYPMVARL 920
L +K G + DV + V GI + A+L+ LYP V ++
Sbjct: 1167 LSDIGFVKEGIVVRDVERAARGGSDGVVDVTGIEANINSTNWKLVSAILVGALYPNVVQV 1226
Query: 921 RPPHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMV 962
P +F + + GA V +HP S+NF+++ D P +V
Sbjct: 1227 MKP---STKFSQGSTGAVYKAPKPDELKFRTKSDGYVYIHPSSVNFQVNHY---DSPYLV 1280
Query: 963 YDEITRGDGGMHVRNCTVVGPLPLLLLA 990
Y E + +++R+CT+V PLLL
Sbjct: 1281 YHEKIKT-TKVYIRDCTMVNMYPLLLFG 1307
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 161/246 (65%), Gaps = 20/246 (8%)
Query: 155 KMSKAEIAMKVESLTSRIEKDAN---LRQIVEERSKLPISSFKDVITSTVDSNQVVLISG 211
++S+AEI + L ++ L ++ +R +LP + +D I + + S+QV++ISG
Sbjct: 513 QISQAEILKQNRRLKDDYQRKLGTKALGSMISQRKRLPAWNKQDDILAALKSHQVLVISG 572
Query: 212 ETGCGKTTQVPQFLLEHIWSKGE---TCKIVCTQPRRISATSVAERISVERGENIGDNIG 268
TGCGKTTQVPQF+L+ +K + C I+CTQPRRISA +VAER++ ER + +G +G
Sbjct: 573 MTGCGKTTQVPQFILDSYLNKKKDLKMCNIMCTQPRRISAMAVAERVAEERVDRLGRIVG 632
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IRLE + ++FCT G++LR L D+ ++HII+DE+HE
Sbjct: 633 YQIRLEKVQSSLTRLLFCTTGIVLRRL--------------EGDPDLEGVSHIIIDEVHE 678
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF++ +RDMLP+ P L++ILMSATL+A+ FSQYF GCPVI +PG T+PV+SF+L
Sbjct: 679 RSEESDFLMMYLRDMLPNRPDLKVILMSATLNAELFSQYFNGCPVIDIPGKTFPVQSFFL 738
Query: 389 EDVLSI 394
ED +
Sbjct: 739 EDAVQF 744
>gi|383865235|ref|XP_003708080.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Megachile rotundata]
Length = 976
Score = 286 bits (731), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 163/446 (36%), Positives = 254/446 (56%), Gaps = 12/446 (2%)
Query: 509 EVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFL 568
E + I+ H+ S+ + L E + + LIE+L+R IC GAILVFL
Sbjct: 413 EFYKFIEPHIRRLASEKRYSAQVIGQLRNPESEKLSINLIEELIRYICRTQPPGAILVFL 472
Query: 569 PGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIA 628
PG DI + R++ + + + S+FVI PLHS++P+++QK +F PP G RKII++T+IA
Sbjct: 473 PGMMDIVNLQKRMIESRQYPE-SQFVIYPLHSLLPTIEQKLIFSEPPDGIRKIIIATSIA 531
Query: 629 ETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHL 688
ET+ITI+DVVYVI+ GR K +D N+ TL+ W+S A+AKQR GRAGR + G CYHL
Sbjct: 532 ETSITIEDVVYVINCGRTKFGKFDVKKNIQTLEPEWISLANAKQRRGRAGRVKPGYCYHL 591
Query: 689 YSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIV 748
Y++ R + +PE+ R +EE+ L++K+L FL +DPP I ++ +
Sbjct: 592 YTKAREMMFDQYPLPEMLRTQLEEVILRIKILQLG-KARSFLDCVMDPPNCQAIDLSLDL 650
Query: 749 LQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTL 808
L+ + AL DE +T LG L L V+P + KM+ +A L C++P +A + ++ F
Sbjct: 651 LRTLNALDSDENLTPLGYHLAQLPVNPRIGKMIIWAALFSCVEPVFAIAASLSFKHAFYC 710
Query: 809 PISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVM 868
P+ E+ A K EL++ G SD +A+ A ++N +RG +FC YF+S +
Sbjct: 711 PLRKEEE--AKQKKLELSN--GQYSDHIALAEALRRFENLYRRGNAGYFCRDYFLSFSTL 766
Query: 869 NMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
+L M+ Q L + F+ P D +S + N+ ++ +++ A LYP VA +R
Sbjct: 767 KLLSEMKSQFVQHLYEMKFLDSANPRD-ASVNRNSNNITLVKSIVYACLYPNVAVVRDVT 825
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFKL 950
+NG TA +V +HP S+N K+
Sbjct: 826 RNG-TLAWTAEDGRVVIHPMSVNDKV 850
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 146/215 (67%), Gaps = 17/215 (7%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQ 242
R KLP + I + NQVV+ISGETGCGKTTQV QF+L+ +G KI+CTQ
Sbjct: 185 RLKLPSYKKRPEILQLLRDNQVVVISGETGCGKTTQVAQFILDDQIEQGNGSITKIICTQ 244
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVS 301
PRRISA SVAER++ ER E +G ++G+ IRLE + SI+FCT G+LL+ + QG
Sbjct: 245 PRRISAISVAERVAAERAERLGRSVGFHIRLEKTLPRDRGSILFCTTGMLLQFI--QGDP 302
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
LKE S HII+DEIHER SDF++A+++ ++P P L+++LMSATL++
Sbjct: 303 ALKEFS------------HIILDEIHERSTDSDFVMAVLKLIIPKRPDLKVVLMSATLNS 350
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+ FS+Y+ CP+I +PGFTYPV+ FYLEDVL+ +
Sbjct: 351 EIFSKYYNECPMIHIPGFTYPVEEFYLEDVLAFTR 385
>gi|384493804|gb|EIE84295.1| hypothetical protein RO3G_09005 [Rhizopus delemar RA 99-880]
Length = 1377
Score = 286 bits (731), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 263/516 (50%), Gaps = 65/516 (12%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICM------DSED---------GAILVFLPGWEDINKT 577
K + ++ + I+ LI QLL IC+ +S D GAILVFLPG +I
Sbjct: 864 KMIKRMDDKKINYDLILQLLEHICIQKPADENSTDKKESAIPSTGAILVFLPGMNEIRAL 923
Query: 578 RDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDV 637
D + ++ F T KF++IPLHS + S Q+K F+ PP G RKI+ STNIAET +TI DV
Sbjct: 924 YDLVSSHNIFGKTEKFLLIPLHSTLSSDHQEKAFEVPPEGVRKIVFSTNIAETGVTISDV 983
Query: 638 VYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL 697
VID+G + +YD VS L +V+KA+AKQR GRAGR Q GIC+HL+++ R +
Sbjct: 984 TVVIDTGMARTINYDDKRRVSRLLQKYVAKANAKQRRGRAGRVQEGICFHLFTKQRFEHM 1043
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL 757
PD++ PEI R+P+EELCL++K+ I D L LD P I+NAI L++I AL+
Sbjct: 1044 PDYETPEILRLPLEELCLRIKVYKLGSII-DVLSSALDAPSVKVIKNAISRLREIHALNA 1102
Query: 758 DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR 817
DE +T LG L L V + KM+ F + CLDP LT+A A ++ PF P ++
Sbjct: 1103 DESLTPLGAHLVNLPVDIHIGKMILFGAIFRCLDPILTIAAALSFKSPFVRPFGKEDEAD 1162
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNA--KQRGQEAW------FCSQYFVSSGVMN 869
A+FE SD L V A+E W++ RG+ W FC + ++S +
Sbjct: 1163 RARARFEC-----NNSDFLTVYQAYEIWRDELMSVRGKPGWIRKMHEFCKENYLSHQNLE 1217
Query: 870 MLLGMRKQLQTELIKNGFIPEDVSSCSHNAR--------------------VPGIIHAVL 909
+ M++Q LI GF+ D S N P +I+A L
Sbjct: 1218 TIEEMKRQFLGLLINIGFVKTDDMDISINRYDIKRSIRLCQVPSAYDKYRDFPSVINAAL 1277
Query: 910 MAGLYPMVAR-LRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITR 968
AGLYP VA +R R +E ++ HP S F ++ VY+ +
Sbjct: 1278 TAGLYPKVAEYVRETDTMANRLME------LKFHPSSALF--CNERAMHSEFFVYNALV- 1328
Query: 969 GDGGMHVRNCTVVG------PLPLLLLATEIAVAPA 998
+G + ++ VV P L+LL+T I + A
Sbjct: 1329 ANGNDYQKDKAVVWEAASIEPAILMLLSTTIEINTA 1364
Score = 193 bits (491), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 177/314 (56%), Gaps = 35/314 (11%)
Query: 92 VETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIF 151
+E K KE P L + +L +L + G+ D ++ ++ K D F
Sbjct: 515 LEEKKLKEEYPQLEMDKQRLTLLTELVNKSTENAGKSDNLKDGPETFET-KPNESTTDSF 573
Query: 152 CKPKMSKAEIAMKVESLTSRIEKDANLRQIV---EERSKLPISSFKDVITSTVDSNQVVL 208
K ++SK + A S R +K N + + E+R LPI++++ I V NQV++
Sbjct: 574 SK-QISKRKKAFN--SSQERFKKRLNSKDYMSMKEKRGDLPIAAYRKDILELVKKNQVLI 630
Query: 209 ISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN---IGD 265
ISGETGCGK+TQVPQFL E + ++CTQPRRISA S+A R+S+E G++ +G
Sbjct: 631 ISGETGCGKSTQVPQFLAEDLLMGSSNGLVICTQPRRISAMSIASRVSIEMGDSPKAVGS 690
Query: 266 N---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVS----QGVSRLKEASNKPAKDDVSAL 318
+GY+IRLESK + +++CT G+LL+ L S QGVS
Sbjct: 691 RDALVGYQIRLESKVSDENVLLYCTTGILLQRLQSDLSLQGVS----------------- 733
Query: 319 THIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPG 378
H+I+DE+HER SDF+L +++ + P L++ILMSAT++A RF +YF P I VPG
Sbjct: 734 -HVIIDEVHERTIESDFLLIMLKKLCQLRPELKVILMSATVEARRFQEYFDNAPTIAVPG 792
Query: 379 FTYPVKSFYLEDVL 392
TYPV+ +LEDV+
Sbjct: 793 RTYPVQVQFLEDVV 806
>gi|303284421|ref|XP_003061501.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456831|gb|EEH54131.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 954
Score = 285 bits (730), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 228/358 (63%), Gaps = 7/358 (1%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
+ L T++ ++I++ LIE L+ I + EDGAILVFLPG +I +RL++N +T +
Sbjct: 339 RCLQTIDEDVINMELIESLIAHIADEYEDGAILVFLPGMAEIRGLHERLVSNLDDVET-R 397
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
F +IPLHS + S +Q+ F PPPG RKI+++TNIAET+ITIDDVV+VID+GR++E YD
Sbjct: 398 FTLIPLHSTLSSEEQRLTFSVPPPGVRKIVMATNIAETSITIDDVVFVIDAGRVRETRYD 457
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEE 712
P + +S+L ++W SKAS++QR GRAGR + G C+HLYS + L F PEI R P++
Sbjct: 458 PASRMSSLVTAWCSKASSRQRRGRAGRVREGYCFHLYSSRKERELAAFTTPEILRTPLDA 517
Query: 713 LCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLS 772
LCLQ+K+L ++ +FL + ++PP +I +A+ L ++ A+ +++T LG L L
Sbjct: 518 LCLQIKVLKLG-DVREFLSQAIEPPPEESIASALASLAELDAVDASDELTPLGRHLAELP 576
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
V + KM+ + + CLDP LT+A + +R PF PI +++ A AK +LA G
Sbjct: 577 VDARLGKMILYGAMFSCLDPVLTIAASVGFRSPFLAPI--DKRDEADEAKRKLAG-AGAS 633
Query: 833 SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
SD L ++ A+ W A+ RG+ E F S+ F+S+ + + MR+Q L + GF+
Sbjct: 634 SDHLTLVRAYAGWIRARARGRGFERDFLSKTFLSAQTLKQISEMRQQYVQLLDQIGFL 691
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 133/219 (60%), Gaps = 24/219 (10%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCT 241
+R +LP + + + + + S ++SG TGCGK+TQVPQFLLE +G C ++ T
Sbjct: 84 KRRELPAHAMRAEVLACIASGPASVVSGATGCGKSTQVPQFLLEDAIRAGRGGECSVIIT 143
Query: 242 QPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVS 301
QPRR+SA +VAER++ ER E IGD +GY IRLESK + ++FCT G+LLR L S
Sbjct: 144 QPRRLSAIAVAERVASERCERIGDVVGYSIRLESKQSARTRLLFCTTGILLRRLQSD--- 200
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY--PHLRLILMSATL 359
D+ +TH++VDE+HERD SDF+L I+R + P R++ MSAT+
Sbjct: 201 -----------PDLVGVTHVVVDEVHERDLLSDFLLVILRALAKRRKDPPFRVVAMSATV 249
Query: 360 DADRFSQYF------GGCPVIQVPGFTYPVKSFYLEDVL 392
+A+ F YF G C +++PG T+PV + LED +
Sbjct: 250 NAELFQTYFERVLDDGPCSAVEIPGRTFPVAEYRLEDAI 288
Score = 44.7 bits (104), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRR-------------FVETAGGAKVRLHPHSLNFKL 950
++ AV+ AGLYP VA P R V T G +V LHP S+ F
Sbjct: 761 LVRAVICAGLYPNVALAEPKTAETSRPGRGGRGGAQTKISVRTKGDGEVSLHPTSICFGA 820
Query: 951 S-FKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
S F+ ++Y E R +++R+ T+VG PLLL ++ V
Sbjct: 821 SAFEHR----FLLYHEKVR-TTKVYIRDATMVGAYPLLLFGGKVKV 861
>gi|18087663|gb|AAL58955.1|AC091811_4 putative helicase [Oryza sativa Japonica Group]
Length = 1121
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 262/461 (56%), Gaps = 23/461 (4%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + + D++K + Y L+ NP+ I LIE +L IC GA+LVF
Sbjct: 472 KNQITTLVEDALKTSSFETYGSRTRDSLSNWNPDCIGFNLIEAVLCHICRKERSGAVLVF 531
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DI+ +D+L A+P D ++ +++ H + + +Q+ +F++PPP RKI+L+TN+
Sbjct: 532 MTGWDDISCLKDQLKAHPLLGDPNRVLLLACHGSMATAEQRLIFEKPPPNVRKIVLATNM 591
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AE +ITI+D+V+V+D G+ KE +YD NN L SW+SKASA+QR GRAGR Q G CYH
Sbjct: 592 AEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISKASARQRRGRAGRVQPGECYH 651
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY + + D+Q+PE+ R P+ LCLQ+K L +I +FL L PP + ++NA+
Sbjct: 652 LYPRCVYDAFADYQLPELLRTPLNSLCLQIKSLQVG-SIGEFLSAALQPPAPLAVQNAVE 710
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L+ IGAL +E +T+LG L L V P + KML + C+DP LT+ RDPF
Sbjct: 711 FLKMIGALDENENLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILTVVAGLSARDPFL 770
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
LP +++ A AK ++ SD +A++ A+E WK+A++ G +C + F+S+
Sbjct: 771 LP--QDKRDLAGTAKSRFSA--KDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQT 826
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDV---SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
+ + +RKQ L G + D +S SHN ++ ++ +GL+P + + H
Sbjct: 827 LQAIHSLRKQFSYILKDAGLVDSDANTNNSLSHNQ---SLVRGIICSGLFPGITSV--VH 881
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDE 965
+ +T +V L+ +S+N K +T P +V+ E
Sbjct: 882 RENSMSFKTMDDGQVLLYANSVNAKY---QTIPYPWLVFGE 919
Score = 221 bits (564), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 160/229 (69%), Gaps = 18/229 (7%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETCK 237
+++E R LP K+ + + + NQV++ISGETGCGKTTQ+PQF+LE I S +G C
Sbjct: 238 KMLEFRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCN 297
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I+CTQPRRISA +VAER+S ERGEN+G+++GYK+RLE GK + ++FCT+G+LLR L+S
Sbjct: 298 IICTQPRRISAMAVAERVSTERGENLGESVGYKVRLEGIKGKDTHLLFCTSGILLRRLLS 357
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+++ +TH+ VDEIHER DF+L +++D+L LRLILMSA
Sbjct: 358 D--------------RNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLSRRRDLRLILMSA 403
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--SILKSAESNHLD 404
TL+A+ FS YFGG P I +PGFTYPV++ +LED+L + K SN LD
Sbjct: 404 TLNAELFSSYFGGAPTIHIPGFTYPVRAHFLEDILERTGYKLTSSNQLD 452
>gi|293331435|ref|NP_001170323.1| uncharacterized protein LOC100384291 [Zea mays]
gi|224035055|gb|ACN36603.1| unknown [Zea mays]
Length = 336
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/358 (49%), Positives = 219/358 (61%), Gaps = 31/358 (8%)
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNG 927
MNML MRKQLQ EL + GF+P D S+CS N++ PGI+ AVLMAG YPMV ++ PP KN
Sbjct: 1 MNMLSSMRKQLQNELSQRGFVPADASACSLNSKDPGIMRAVLMAGAYPMVGKMLPPRKNA 60
Query: 928 RRFV-ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPL 986
R+ V ETA GAKVRLHPHS NF LSF K+ PL++YDEITRGDGGM+++N +VVG PL
Sbjct: 61 RKSVLETASGAKVRLHPHSCNFNLSFSKSSGNPLLIYDEITRGDGGMYIKNSSVVGSYPL 120
Query: 987 LLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKS 1046
LL+A E+ VAP DDD+DE+E D E ++ T QH E +MSSPD
Sbjct: 121 LLIAAEMVVAPP-------------DDDSDEDEEDSSEDEAEESTLVQHKEEIMSSPDSI 167
Query: 1047 VTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSY 1106
V+VVVDRWL F +TALD+AQIYCLRERL+ AILFKV HPQ LPP L ASMYA+ ILS+
Sbjct: 168 VSVVVDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPALGASMYAITCILSF 227
Query: 1107 DGFSGISLPAESVESLTSMIQATEIDKCPAARNRGTGQNPSNFLMSLMSPNTRQYFPLRD 1166
DG + P + + S E K R G P FLMSL++ T ++
Sbjct: 228 DGLPSMVPPNDLSANRGSGQDLAEASKFSQGRRAGY-IPPIGFLMSLLADRTHNAPSFQN 286
Query: 1167 HKSRIPAHKGSTKGNQLSTQVAQPPL--FHGS--PVVGSGSGTHIPPGPRGDSFKRPR 1220
+ H G G T+ ++ P+ F S P SG GT P SFKR R
Sbjct: 287 SSN----HPG---GGSAHTRPSRAPVGRFDRSRRPFRNSGPGTSAP-----RSFKRQR 332
>gi|395510298|ref|XP_003759415.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Sarcophilus harrisii]
Length = 1341
Score = 285 bits (728), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 260/485 (53%), Gaps = 46/485 (9%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F ++
Sbjct: 810 MNPHKINLDLILELLVFLDRSPQFRNVEGAVLIFLPGLAHIQQLYDLLSNDRRFYSKDRY 869
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 870 KLIALHSILSTQDQAAAFTIPPPGIRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 929
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R D+ VPEI R+P+EEL
Sbjct: 930 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFMDYSVPEILRVPLEEL 989
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L E K+T LG+ L
Sbjct: 990 CLHIM----KCNLGSPEDFLSKALDPPQPQVISNAMNLLRKIGACELSEPKLTPLGQHLA 1045
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1046 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSTLA 1100
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + +A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1101 LANSDHLTIYSAYLGWKKARQEGGYRSEMAYCRRNFLNRTALLTLEDVKQELIKLVKAAG 1160
Query: 887 FIPEDVSSCSHNARVP-----------GIIHAVLMAGLYPMVARLR-----PPHKNGRRF 930
F+ SS SH+ + ++ AVL AGLY V ++ +
Sbjct: 1161 FVS---SSTSHDWDINRATQTLSFQEIALLKAVLTAGLYDSVGKIMYMTSIDITEKLACI 1217
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
VETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1218 VETAQG-KAQVHPSSVNRDLQV-----YGWLLYQEKVRY-AKVYLRETTLISPFPILLFG 1270
Query: 991 TEIAV 995
+I V
Sbjct: 1271 GDIEV 1275
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK+TQVP F
Sbjct: 519 VRNLFRKLQSTPKYQKLLKERQQLPVFRHRNSIVETLKRHRVVVVAGETGSGKSTQVPHF 578
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W G+ C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 579 LLEDLLLNEWGSGK-CNIVCTQPRRISAVSLATRVCEELGCENGPGGKNSLCGYQIRMES 637
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +++CT GVLLR L G+ ++ ++H+IVDE+HER SDF
Sbjct: 638 RASDATRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHERSVQSDF 683
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LEDV+
Sbjct: 684 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDVV 740
>gi|302803538|ref|XP_002983522.1| hypothetical protein SELMODRAFT_234253 [Selaginella moellendorffii]
gi|300148765|gb|EFJ15423.1| hypothetical protein SELMODRAFT_234253 [Selaginella moellendorffii]
Length = 868
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/625 (32%), Positives = 310/625 (49%), Gaps = 94/625 (15%)
Query: 518 MENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKIC----------MDSEDGAILVF 567
+EN+ ++ + + L TV+ +I+ LIE LL + +E G++LVF
Sbjct: 305 VENSETNMEYSEATMRSLDTVDESVINYELIELLLSTVFSLEPVDDTSNWKAEAGSVLVF 364
Query: 568 LPGWEDINKTRDRLLANPFFR--DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILST 625
LPG +I+K + RL + + ++ LH + S QQK+VF RPP G RK++L+T
Sbjct: 365 LPGMMEISKLQARLQNSKQLSAYGVERKWVLALHGSLSSEQQKRVFVRPPRGVRKVVLAT 424
Query: 626 NIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIC 685
N+AET+ITIDD++YVID+GR KE SYD +S LQ +WVSKAS KQRAGRAGR Q G C
Sbjct: 425 NVAETSITIDDILYVIDTGRHKEMSYDHSKGLSCLQETWVSKASCKQRAGRAGRVQPGCC 484
Query: 686 YHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNA 745
LYS+ + + D Q+PEI+R+ +E LCL+VK L ++ L K PP + A
Sbjct: 485 LRLYSKKQFKAFDDHQLPEIQRVSLEGLCLKVKSL-LQSKVQSTLSKMPTPPDPDAVIAA 543
Query: 746 IIVLQDIGAL-SLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRD 804
+ L+DI A + +E +T LG L + V + KML F ++ CLDP LT+A + R
Sbjct: 544 VQSLKDINAFDAENETLTPLGRHLTQMPVDARVGKMLVFGCMLKCLDPVLTIAASMSGRP 603
Query: 805 PFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYF 862
F P + ++ A AK L+ +SD +A++AA+ W A++ G EA +C+ F
Sbjct: 604 VFFSP--QDNREEARLAKLRLSGT--SKSDHIALVAAYNGWITARRDGWEAEKDYCASNF 659
Query: 863 VSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRP 922
+S + + R+ L + GF+P D+SS ++ +I AV+ AG YP +AR+R
Sbjct: 660 LSREALASIEASREDYLNVLRELGFVPGDISSLEGSSNSVRVIKAVVCAGFYPKIARVRH 719
Query: 923 PHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDDCPLMVYD 964
P K +V+T GG +V LHP S+NF ++ P +V
Sbjct: 720 PEKT---YVQTEGGTVPKLAAAHEVQYFTRLDGRVFLHPASVNFSAGHFES---PWLVVT 773
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDC 1024
++ + ++ R ++V LL+ I+V
Sbjct: 774 DMVK-TSKVYARETSMVPAYSLLIFGGSISV----------------------------- 803
Query: 1025 MEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTH 1084
+H + +VVD WL F + A I LR+R+ +L K +
Sbjct: 804 ---------RHERQM---------IVVDGWLEFEAPARIAVLIKELRKRVDALLLAKTGN 845
Query: 1085 PQKALPPVLEASMYAMASILSYDGF 1109
P L A + A+ +L DGF
Sbjct: 846 P--GLDISSSAVVAALLRLLETDGF 868
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 47/320 (14%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI- 229
R++ I+ R LP+ K I + + N V +I GETGCGK+TQ+PQ++LE
Sbjct: 50 RLQTSRQYADIMTSRRSLPVFKRKSEILAGISCNPVTIICGETGCGKSTQIPQYVLEKEI 109
Query: 230 -WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTN 288
G +C I+CTQPRRISA +A R+++ER E +G +GY +RL+S K + ++FCT
Sbjct: 110 EMGNGGSCNIMCTQPRRISALGLAARVAMERNEVVGRVVGYSVRLDSCCSKFTRLLFCTT 169
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP-SY 347
G+LLR ++S ++ +TH+IVDE+HER SD +L ++R+ + +
Sbjct: 170 GILLRRMLSD--------------PELEGVTHVIVDEVHERTLESDLLLLLLREHIQRTR 215
Query: 348 PHLRLILMSAT----LDADRFSQYFGGCP-VIQVPGFTYPVKSFYLEDVL---------- 392
+R+ILMSAT L AD F Q G P +++V GFT+PV+ +L+DVL
Sbjct: 216 GKIRVILMSATAETSLFADYFQQGLGLRPELLRVQGFTFPVRELHLDDVLELTGYKVTKN 275
Query: 393 -----------SILKSAESNHLDS-ASLIVPNEDP--ELTEENKSTLDEAISLAWSNDEF 438
++ ++ SN DS S +V N + E +E +LD + +
Sbjct: 276 SRFATNKKAKSEVMTTSASNSFDSWESRVVENSETNMEYSEATMRSLDTVDESVINYELI 335
Query: 439 DMLLELV-SLEGSPNVYNYQ 457
++LL V SLE + N++
Sbjct: 336 ELLLSTVFSLEPVDDTSNWK 355
>gi|345483837|ref|XP_001604337.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Nasonia
vitripennis]
Length = 985
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/456 (36%), Positives = 257/456 (56%), Gaps = 15/456 (3%)
Query: 539 NPELIDLV--LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL-ANPFFRDTSKFVI 595
NP DL LI +L + IC+ GAIL+FLPG DINK LL F RD ++VI
Sbjct: 437 NPATEDLSFDLICELTKHICLTKGPGAILIFLPGLMDINKVNRMLLECGSFPRD--RYVI 494
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
PLHS +P+V QK +F+ PP G RKII++T IAET+ITI+DVVYVID G+ K +D N
Sbjct: 495 YPLHSRMPTVDQKCIFEVPPEGVRKIIIATVIAETSITIEDVVYVIDCGKTKISKFDIAN 554
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
N+ TL+ WVS+A+A+QR GRAGR Q G+CYHL+++ R + + +PE+ R +EE+ L
Sbjct: 555 NLQTLEQEWVSEANARQRKGRAGRVQPGVCYHLFTKARGYAFDKYPLPEMLRTRLEEVIL 614
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
Q+K+L + FL +DPP I ++ +L+ + AL +E +T LG L L + P
Sbjct: 615 QIKILQIG-KADTFLASVMDPPDPQAISLSLELLRQLNALDENENLTPLGYHLAQLPLDP 673
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
KM+ + + C++P +A + ++D F P+ +++ A K EL SD
Sbjct: 674 RTGKMIIWGAMFSCIEPIFAIAASLSFKDAFYCPLGKDDE--AQKKKMELG--MNQYSDH 729
Query: 836 LAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS- 894
LA+ A + + RG FC +YF+S + +L M++Q L + F+ D +
Sbjct: 730 LALAEALKRFDERNYRGSVYSFCREYFLSWNTLKLLSDMKQQFARYLYEMKFLRNDNPND 789
Query: 895 --CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSF 952
+ N+ ++ A++ AGLYP +A ++ + G + + T V+LHP SLN K++
Sbjct: 790 DFANKNSHNKSLVKAIVCAGLYPNIAIIKRASRGGVKAL-TTEKEMVKLHPSSLNNKVTS 848
Query: 953 KKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
+ P + Y + R +++ + T V P+ LL
Sbjct: 849 LSSFPSPYITY-FLKRKTTAIYLFDTTCVSPVALLF 883
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 166/252 (65%), Gaps = 18/252 (7%)
Query: 147 RVDIFCKPKMSKAE-IAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQ 205
R + +PK+ + E + +++ + I+ R +++ R+KLP + I + SNQ
Sbjct: 141 RRSLILQPKLQRDENMDIRLLDELNTIKASFQYRNMLKFRAKLPAYEKRHEILDLIYSNQ 200
Query: 206 VVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCTQPRRISATSVAERISVERGENI 263
VVLISGETGCGKTTQV QF+L++ +G T I CTQPRRISA +VAER++ ER + +
Sbjct: 201 VVLISGETGCGKTTQVAQFILDYEIECGRGSTTSIACTQPRRISAITVAERVAAERTDRL 260
Query: 264 GDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
G+++GY IRLE + SIV+CT G+LL+ + PA + S HII
Sbjct: 261 GNSVGYHIRLEKVLARPQGSIVYCTTGMLLQFM-----------QMDPALRNYS---HII 306
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
+DEIHER SDF++ +++ ++P P L++ILMSATL++++FS+Y+ CP+I +PGFTYP
Sbjct: 307 LDEIHERSTQSDFIITLLKQIIPKRPDLKVILMSATLNSEQFSKYYNNCPMIHIPGFTYP 366
Query: 383 VKSFYLEDVLSI 394
V+ FYLEDVL++
Sbjct: 367 VEEFYLEDVLAM 378
>gi|357167590|ref|XP_003581237.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Brachypodium
distachyon]
Length = 1418
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 188/514 (36%), Positives = 278/514 (54%), Gaps = 58/514 (11%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
++ L +N E+ID L+E L+ I + GA+LVFLPG +I DRL A+ F+ S
Sbjct: 843 NQNLKRINEEVIDFDLLEDLICYIDENCPHGAVLVFLPGVAEIEMLIDRLSASVRFKGVS 902
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
I+PLHSM+ Q+KVF+ PP RK+IL+T+IAET+ITIDDVVYV+D+G+ KE Y
Sbjct: 903 SDWILPLHSMLSPTDQRKVFQSPPENIRKVILATDIAETSITIDDVVYVVDTGKHKENRY 962
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIPI 710
+P +S++ W+S+A+AKQR GRAGR + G+C+ LY+Q R L FQVPE+ R+P+
Sbjct: 963 NPQKKMSSIVEDWISRANAKQRRGRAGRVRPGLCFCLYTQHRFEKLMRPFQVPEMLRMPL 1022
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
ELCLQ+K L +I+ FL K ++PP I +AI +L +GA E+++ LG L
Sbjct: 1023 TELCLQIKSLHLG-DIKSFLLKAVEPPKEEAISSAIDLLYKVGAFEGHEELSPLGYHLAK 1081
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISP-NEKKRATAAKFEL--AS 827
L V L+ KM+ + + CL P L++A Y+ PF ISP +EK+ AK L +
Sbjct: 1082 LPVDVLIGKMMLYGAIFGCLSPVLSVAAFLSYKSPF---ISPKDEKQNVEKAKAALLNEN 1138
Query: 828 LYGG-------QSDQLAVIAAFECWKNA-KQRGQEA--WFCSQYFVSSGVMNMLLGMRKQ 877
L G QSD L ++ A+ W ++ G + FC ++++S VM M+ MR Q
Sbjct: 1139 LDGSTSVIDTKQSDHLLMVIAYNKWSRILQEHGARSAHQFCRSFYLNSTVMYMIRDMRLQ 1198
Query: 878 LQTELIKNGFI--PED-VSSCSHN-------------------ARVPGIIHAVLMAGLYP 915
T L G + P+D + S S N AR +I +V+ AGLYP
Sbjct: 1199 YGTLLADIGLVDLPKDSLRSMSGNRKSNLESWFANMSVPFNLYARYTSVIKSVISAGLYP 1258
Query: 916 MVAR----LRPPHKNGRRFVETA----------GGAKVRLHPHSLNFKLSFKKTDDCPLM 961
VA + P GR+ + G +V +HP S+N L K+ P +
Sbjct: 1259 NVAATVEGVDPGALGGRKPSDILFGKDRPRWYDGKREVHIHPSSVNHSL---KSVQYPFL 1315
Query: 962 VYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
V+ E + +R+ +V+ P LLL + +
Sbjct: 1316 VFLEKVE-TSKVFLRDTSVISPYSLLLFGGSMVI 1348
Score = 189 bits (480), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 25/223 (11%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCK 237
++++ R+ LPI+ K + N V+++SGETGCGKTTQVPQF+L+ + G C
Sbjct: 562 KMLQARASLPIARLKKHFLQLLKENDVIVVSGETGCGKTTQVPQFILDDMIESELGGNCN 621
Query: 238 IVCTQPRRISATSVAERISVERGENIGDN----IGYKIRLESKGGKHSSIVFCTNGVLLR 293
IVCTQPRRI+A SVAER+S ER E+ + +GY++RL+S + + ++FCT G+LLR
Sbjct: 622 IVCTQPRRIAAISVAERVSDERCESSPGSKDSLVGYQVRLDSARNERTKLLFCTTGILLR 681
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH---- 349
L + NK D+S +TH++VDE+HER SDF+L +++ ++ +
Sbjct: 682 KL----------SGNK----DLSDVTHVVVDEVHERTILSDFLLIVLKSLVEKRSNQPGR 727
Query: 350 -LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
L++ILMSAT+D+ F++YFG CPVI V G T+PV + +LEDV
Sbjct: 728 KLKVILMSATVDSTLFARYFGDCPVISVEGRTHPVSTHFLEDV 770
>gi|322798986|gb|EFZ20446.1| hypothetical protein SINV_02899 [Solenopsis invicta]
Length = 933
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 244/441 (55%), Gaps = 27/441 (6%)
Query: 530 LLDKYLATV-----NP--ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL 582
L +KY A V NP E + L LIE+L+R IC GAIL+FLPG DI+ +L
Sbjct: 403 LENKYDARVINQLRNPVSETLSLDLIEELVRYICNTKGPGAILIFLPGMLDISNLNKMML 462
Query: 583 ANPFFRD-----------TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETA 631
+ + T K++I LHS +PSV QK +FK PP G RKII++T+IAET+
Sbjct: 463 DSERYPSRNKHHNYKTFLTDKYIIYALHSRLPSVDQKLIFKEPPHGVRKIIIATSIAETS 522
Query: 632 ITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ 691
ITI+DVVYVID G+ K +D N+ TL+ WVS A+AKQR GRAGR Q+G CYHLY++
Sbjct: 523 ITIEDVVYVIDCGKTKFGKFDINKNIQTLEPEWVSLANAKQRRGRAGRVQSGECYHLYTK 582
Query: 692 LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQD 751
R + + +PE+ R +EE+ LQ+K+L +E+FL +DPP I ++ +LQ
Sbjct: 583 AREMTFDQYPLPEMLRTRLEEVILQIKILQLG-KVEEFLVTVMDPPDPKAIHLSLELLQT 641
Query: 752 IGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPIS 811
+ AL E +T LG L L + P KM+ + L C++P +A + ++D F P+
Sbjct: 642 LNALDTHENLTPLGYHLAHLPLDPRTGKMILWGALFSCVEPIFAIAASLTFKDAFYCPLG 701
Query: 812 PNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNML 871
EK A K EL+ SD +A+ A ++ A+ RG FC +YF+S + +L
Sbjct: 702 QEEK--ANRKKLELSM--QQCSDHIALAEALRRYEVARHRGNARQFCREYFLSYNTLKLL 757
Query: 872 LGMRKQLQTELIKNGFIPEDVSS---CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGR 928
M+ Q L F+ D S + N+ +I A++ AGLYP +A +R KNG
Sbjct: 758 SEMKNQFAQYLYDMKFLDSDNPSHVNSNRNSDNIALIKAIVCAGLYPNIAVIRRVTKNG- 816
Query: 929 RFVETAGGAKVRLHPHSLNFK 949
T VR+HP S+N K
Sbjct: 817 IISWTPEDGSVRIHPSSVNNK 837
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 149/214 (69%), Gaps = 17/214 (7%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL--EHIWSKGETCKIVCTQ 242
RSKLP K I ++ NQVV+ISGETGCGKTTQV QF+L E G +I+CTQ
Sbjct: 160 RSKLPAYKKKSEILQLIEDNQVVVISGETGCGKTTQVAQFILDDELEAGNGSVTRIICTQ 219
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVS 301
PRRISA SVAER+++ER E +G ++GY+IRLE + SI+FCT GVLL+++
Sbjct: 220 PRRISAISVAERVAMERTEKLGRSVGYQIRLEKIPSRDQGSILFCTTGVLLQIM------ 273
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
+ PA + + +H+I+DEIHER SDF++ +++ ++P L+++LMSATL+A
Sbjct: 274 -----KHDPA---LKSFSHVILDEIHERTTESDFVITLLKQVIPKRVDLKVLLMSATLNA 325
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
+RFS+Y+ CP+I +PGFTYPV+ FYLEDVLS +
Sbjct: 326 ERFSKYYDNCPMIHIPGFTYPVQEFYLEDVLSFV 359
>gi|189526746|ref|XP_001921063.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Danio rerio]
Length = 1417
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 280/506 (55%), Gaps = 59/506 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFF- 587
K LA ++ + I++ L+E LL I +D + GA+LVFLPG +I + ++L +N F
Sbjct: 846 KTLAAMDLDKINMDLVESLLEWI-VDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFN 904
Query: 588 -RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
R T++ V+ PLHS + + +Q+ VF RP G KII+STNIAET++TIDDVVYVIDSGRM
Sbjct: 905 NRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRM 964
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEI 705
KEK YD ++ +L+ WVS+A+A QR GRAGR +G+C+HL++ R L Q+PEI
Sbjct: 965 KEKRYDASRSMESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEI 1024
Query: 706 KRIPIEELCLQVKLLDPNCN--IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
+R+P+E+LCL+VK+L+ ++ + ++PP ++ A L +GAL+ +E +T
Sbjct: 1025 QRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTP 1084
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG L CL V + K++ + CLDPALT+A + ++ PF P E+ F
Sbjct: 1085 LGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAF 1144
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTE 881
LA+ SD LA++ A++ W NA Q G +A +C + F+S + + +++Q
Sbjct: 1145 SLAN-----SDHLALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAEL 1199
Query: 882 LIKNGFIP--------EDVSS-------------CSHNARVPGIIHAVLMAGLYPMVARL 920
L GF+ E +SS + N+ ++ A+L A LYP V ++
Sbjct: 1200 LSDIGFVKDGLKARVIEKMSSKGSDGVLEATGYEANLNSDNTKLMSAMLCAALYPNVVQV 1259
Query: 921 RPPHKNGR----------------RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYD 964
R P + RF+ + GA V +HP S+NF + + D P +VY
Sbjct: 1260 RSPQMKYKLTSKGAMKMQPKAEEQRFMTKSDGA-VHIHPSSVNFSV---RHYDSPYLVYH 1315
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLA 990
E + + +R+C++V P++L
Sbjct: 1316 EKVK-TSRVFIRDCSMVCVYPMVLFG 1340
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 140/214 (65%), Gaps = 17/214 (7%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE---TCKIV 239
E+R KLP ++ I + NQV++ISG TGCGKTTQ+PQF+L++ G I+
Sbjct: 564 EQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVANII 623
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRRISA +VA R++ ER E +G + GY+IRLE+ + ++FCT GVLLR L
Sbjct: 624 CTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRL---- 679
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
++S +TH+IVDE+HER SDF+L +++D++ L++I+MSATL
Sbjct: 680 ----------EGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATL 729
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
+A+ FSQYF CP I +PG T+PV+ F+LED ++
Sbjct: 730 NAELFSQYFNNCPCIHIPGRTFPVEQFFLEDAIA 763
>gi|242056673|ref|XP_002457482.1| hypothetical protein SORBIDRAFT_03g008040 [Sorghum bicolor]
gi|241929457|gb|EES02602.1| hypothetical protein SORBIDRAFT_03g008040 [Sorghum bicolor]
Length = 1390
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 260/434 (59%), Gaps = 11/434 (2%)
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
++ GAILVF+ GW+DIN +++L ANP D SK +++ HS + S +QK +F +P P
Sbjct: 760 VEERSGAILVFMTGWDDINALKEQLQANPLLGDPSKVLLLTCHSSMASSEQKLIFDKPEP 819
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
G RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD NN L +W+SKASA+QR GR
Sbjct: 820 GVRKIVLATNLAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASARQRRGR 879
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDP 736
AGR Q G CYHLY + + D+Q+PE+ R P++ LCLQ+K L +I +FL + L
Sbjct: 880 AGRVQPGECYHLYPRSVYDAFADYQLPELLRTPLQSLCLQIKSLRLG-SISEFLSRALQS 938
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P S++++NAI L+ IGA +E++T LG+ L L V P + KML F + +CLDP LT+
Sbjct: 939 PESLSVQNAIEYLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIFNCLDPILTI 998
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW 856
RDPF P ++K A +AK + + SD LA++ A+E W+ A++
Sbjct: 999 VSGLSVRDPFLTPF--DKKDLAESAKLQFSC--RDYSDHLALVRAYEGWREAERDRAGYD 1054
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPM 916
+C + F+S + + +R+Q L G + E+++ C+ +R ++ AV+ AGLYP
Sbjct: 1055 YCWKNFLSVQTLKAIDSLRRQFLFLLKDTGLVDENMTVCNKWSRDENLVRAVICAGLYPG 1114
Query: 917 VARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVR 976
V+ + +K ++T +V L+ S+N K + P +V++E + + + +R
Sbjct: 1115 VSSV--VNKEKSISLKTMEDGQVMLYSSSVNGK---EAKIPFPWLVFNEKVKVN-SVFLR 1168
Query: 977 NCTVVGPLPLLLLA 990
+ T + LLL
Sbjct: 1169 DSTAISDSILLLFG 1182
Score = 213 bits (541), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 154/269 (57%), Gaps = 69/269 (25%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKI 238
++E R LP K + + NQV+++SGETGCGKTTQ+PQ++LE ++G TC I
Sbjct: 468 MMEFRRSLPAFKEKQTLLEAISQNQVIVVSGETGCGKTTQLPQYILESEIDAARGATCSI 527
Query: 239 VCTQPRRISATSVAERISVERGENIGDNI------------------------------- 267
+CTQPRRISA +V+ER++ ERGE IG+++
Sbjct: 528 ICTQPRRISAIAVSERVAAERGEKIGESVAMRLHQSHLPILLRHAGADAQPHYRAAVMAD 587
Query: 268 ----------------------GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKE 305
GYK+RLE G+ + ++FCT GVLLR L+ V R
Sbjct: 588 GMLERSFIAPDGEPWWDLDAAVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL---VDR--- 641
Query: 306 ASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFS 365
++ +TH+IVDEIHER DF+L +++D+LP P LRLILMSATL+A+ FS
Sbjct: 642 --------NLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNAELFS 693
Query: 366 QYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
YFGG P+I +PGFTYPV+S +LED+L I
Sbjct: 694 SYFGGAPMIHIPGFTYPVRSRFLEDILEI 722
>gi|356564424|ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Glycine max]
Length = 1528
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 185/506 (36%), Positives = 274/506 (54%), Gaps = 55/506 (10%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
+N ++ID L+E L+ I ++GAILVFLPG +IN D+L+A+ F S +IP
Sbjct: 961 LNEDVIDYDLLEDLICFIDETCDEGAILVFLPGMSEINYLHDKLVASSQFGGPSSEWVIP 1020
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS V S +QK+VF RPP RK++++TNIAET+ITIDDV+YVID G+ KE Y+P +
Sbjct: 1021 LHSAVASSEQKRVFLRPPGNIRKVVIATNIAETSITIDDVIYVIDCGKHKENRYNPQKKL 1080
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD-FQVPEIKRIPIEELCLQ 716
S++ W+S+A+A QR GRAGR + GIC+ LY++ R L +QVPE+ R+P+ ELCLQ
Sbjct: 1081 SSMVEDWISRANATQRRGRAGRVKPGICFSLYTRHRFEKLMRPYQVPEMLRMPLVELCLQ 1140
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
+KLL I+ FL + L+PP + +AI +L ++GAL DE++T LG L L V L
Sbjct: 1141 IKLLSLGY-IKPFLSEALEPPKVEAMDSAISLLYEVGALEGDEELTPLGHHLAKLPVDVL 1199
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS--LYG---- 830
+ KM+ + + CL P L++A Y+ PF P +E++ AK L + L G
Sbjct: 1200 IGKMMLYGAMFGCLSPILSVAAFLSYKSPFVYP--KDERQNVERAKLTLLNDKLDGPGNT 1257
Query: 831 ----GQSDQLAVIAAFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELI 883
QSD L ++ A++ W+ ++G +A FC+ +F+S VM M+ MR Q T L
Sbjct: 1258 NDIDRQSDHLLMMTAYKRWERILTEKGAKAAQKFCNSFFLSCSVMFMIREMRVQFGTLLA 1317
Query: 884 KNGFI--PEDVSSCSHN------------------ARVPGIIHAVLMAGLYPMVA----- 918
G I P+D + A I+ A+L AGLYP VA
Sbjct: 1318 DIGLITLPKDYQKNAKKIGSLDSWLSDVSQPFNIYAHHSSILKAILCAGLYPNVAAGEQG 1377
Query: 919 ---------RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRG 969
+ + R V G +V +HP S+N + K P +V+ E
Sbjct: 1378 IVAAVLSSLKQSSSSASSGRTVWFDGRREVHIHPSSIN---NNSKGFQYPFLVFLEKVET 1434
Query: 970 DGGMHVRNCTVVGPLPLLLLATEIAV 995
+ + +R+ +V+ P +LL I V
Sbjct: 1435 N-KVFLRDTSVISPYSILLFGGSIDV 1459
Score = 179 bits (454), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 138/218 (63%), Gaps = 25/218 (11%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQ 242
R+ LPI++ K I ++ + +++ GETG GKTTQVPQF+L+ + G C I+CTQ
Sbjct: 683 RATLPIAALKGDILKLMEEHDFLVVCGETGSGKTTQVPQFILDDMIESGHGGYCNIICTQ 742
Query: 243 PRRISATSVAERISVERGE----NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
PRRI+A SVAER++ ER E + G IGY++RL+S + + ++FCT G+LLR L+
Sbjct: 743 PRRIAAVSVAERVADERCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGILLRKLM-- 800
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP-----SYPHLRLI 353
+S +THIIVDE+HER DF+L ++++++ S L++I
Sbjct: 801 ------------GDQSLSGITHIIVDEVHERSLLGDFLLIVLKNLIEKQSTNSSGKLKII 848
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
LMSAT+D+ FS+YF CPV+ G T+PV +++LED+
Sbjct: 849 LMSATVDSSLFSRYFNNCPVVTAEGRTHPVTTYFLEDI 886
>gi|432917465|ref|XP_004079522.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like [Oryzias
latipes]
Length = 1126
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 270/499 (54%), Gaps = 42/499 (8%)
Query: 516 KHMENALSDSMKQQLLDKYLATVNPELI-DLVLIEQLLRKICMDSEDGAILVFLPGWEDI 574
+ +E+ L + M+ +++ + +N E DL L+ ++ I + + GA+L FLPGW+DI
Sbjct: 555 RFLEDVLKE-MRHPPVNQNASKMNKEATPDLDLVADVIEHIDRNGDAGAVLCFLPGWQDI 613
Query: 575 NKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITI 634
+D+L A P F S +I+PLHS + Q++VF+RPP G RKI+L+TNIAET+ITI
Sbjct: 614 RAVQDKLEARPHFSSGS-HMILPLHSSLSVPDQQRVFQRPPEGRRKIVLATNIAETSITI 672
Query: 635 DDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA 694
DD+V+V+D+G KE++YD VS L + W+S+++ QR GRAGRCQ G YHL+ + +
Sbjct: 673 DDIVHVVDAGTHKEQNYDARTKVSCLDTVWISRSNVTQRKGRAGRCQPGQSYHLFPRKQL 732
Query: 695 ASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGA 754
S+ F VPEI R P+E L LQ K+ PNC DFL + LD P +R+A+ LQDIG
Sbjct: 733 ESMSPFPVPEILRTPLESLVLQAKIHSPNCKAVDFLSQVLDSPDKDAVRDAVQTLQDIGV 792
Query: 755 LSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNE 814
L E +T LGE++ C+S P + K+L + + C+ P L +A A RDPF +
Sbjct: 793 LDKTESLTPLGERVACMSCDPRLGKVLVLSAMFRCVLPMLCVA-ACLTRDPFHNSM---- 847
Query: 815 KKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA---WFCSQYFVSSGVMNML 871
+ RA + + A SD L A W+ + G + Y +S G + +
Sbjct: 848 QNRAPVRQAKEALSRSSYSDYLVFSRAVLGWRKVQLEGDREDRDSYLENYTLSRGSLRFI 907
Query: 872 LGMRKQLQTELIKNGFIPEDVSSCSHNARVPG-------IIHAVLMAGLYPMVARLRPPH 924
G+ Q L++ G + S C + + ++ AVL+AGLYP + ++
Sbjct: 908 NGLMSQFSENLLEAGLVSR-ASECQRPSSLYNEHSSQNELLKAVLLAGLYPNLIQV---- 962
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFK-LS----------FKKTDDCP--LMVYDEITRGDG 971
++ V T GG R P++L+F+ LS + +D P + + + +G
Sbjct: 963 ---KKGVVTKGG---RFRPNNLSFRTLSGPVLLHRSSVNRGKEDLPSRWLTFFSAVKSNG 1016
Query: 972 GMHVRNCTVVGPLPLLLLA 990
+ +R+C+ V L LLL
Sbjct: 1017 NVFIRDCSSVHSLALLLFT 1035
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 143/220 (65%), Gaps = 18/220 (8%)
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPR 244
+LP+ + + + S V S++VV+I+GETGCGKTT++P+FLLE S+G C I+ TQPR
Sbjct: 366 ELPVDTHRQRVISAVRSSRVVVIAGETGCGKTTRIPRFLLEDGVSEGAGADCNILVTQPR 425
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHS--SIVFCTNGVLLRLLVSQGVSR 302
RISA SVA R++ E G + ++GY++RLES+ + S +++F T GVLL+ L S R
Sbjct: 426 RISAVSVAHRVAQEMGPALKHHVGYQVRLESRPPEQSGGAMLFLTVGVLLKKLQSNPTLR 485
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
++H++VDE+HERD +D +LA++R L LR++LMSAT D
Sbjct: 486 --------------GISHVVVDEVHERDINTDLLLALLRSALKENHDLRVVLMSATGDNQ 531
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
R ++YFGG P+++VPGF +PVK +LEDVL ++ N
Sbjct: 532 RLAEYFGGSPIVKVPGFMHPVKDRFLEDVLKEMRHPPVNQ 571
>gi|449439551|ref|XP_004137549.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1168
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 267/460 (58%), Gaps = 11/460 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ I LIE +L I GAILVF+ GW+DIN +D+LL++P D S+ +
Sbjct: 518 LSYWNPDSIGFNLIEHVLSYIVKKERPGAILVFMTGWDDINSLKDQLLSHPLLGDPSRVL 577
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +QK +F +P G RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD
Sbjct: 578 LLACHGSMASSEQKLIFDKPEDGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDAL 637
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SKA+A+QR GRAGR Q G CYHLY + + D+Q+PE+ R P++ LC
Sbjct: 638 NNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPKCVYDAFADYQLPELLRTPLQSLC 697
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I DFL L PP ++++NAI L+ IGAL E +T LG+ L L V
Sbjct: 698 LQIKSLQLG-SISDFLSNALQPPEPLSVQNAIDYLKIIGALDNKENLTVLGKHLSVLPVE 756
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP +T+ RDPF +P ++K A +AK A+ SD
Sbjct: 757 PKLGKMLILGAIFNCLDPIMTIVAGLSVRDPFLMP--SDKKDLAESAKAHFAA--RDCSD 812
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A++ W++A+++ +C + F+S + + +RKQ L G + D
Sbjct: 813 HLALVRAYQGWRDAEKQQSGYEYCWRNFLSMQTLRAIDSLRKQFFFLLKDAGLVDYDSEK 872
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
C+ + +I AV+ AGL+P + + +K ++T +V L+ +S+N + K
Sbjct: 873 CNISNHDEHLIRAVICAGLFPGICSV--VNKEKSVALKTMEDGQVMLYSNSVN--AGYPK 928
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V++E + + + +R+ T V LLL ++
Sbjct: 929 I-PYPWLVFNEKVKVN-SVFLRDSTGVSDSVLLLFGGNVS 966
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 160/230 (69%), Gaps = 18/230 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
++++E R LP ++ + + NQVV++SGETGCGKTTQ+PQ++LE ++G +C
Sbjct: 255 QKMIEFRKSLPAFKEREALLKAISENQVVVVSGETGCGKTTQLPQYILESEIEAARGASC 314
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 315 SIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLL 374
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ ++H+IVDEIHER DF++ +++D+LP P LRLILMS
Sbjct: 375 ---VDR-----------NLKGVSHVIVDEIHERGMNEDFLVIVLKDLLPRRPDLRLILMS 420
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI--LKSAESNHLD 404
ATL+A+ FS YFGG P + +PGFTYPV++ +LE++L I K N +D
Sbjct: 421 ATLNAELFSSYFGGAPTMHIPGFTYPVRAHFLENILEITGYKLTSYNQID 470
>gi|79548544|ref|NP_178223.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
gi|330250311|gb|AEC05405.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
Length = 1113
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 256/461 (55%), Gaps = 14/461 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ P+ I LIE LL IC + G IL+FL GW+DI+ +++L +P F + +
Sbjct: 472 LSCWYPDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVM 531
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + + +Q+ +F+ P G RKI+L+TNIAET+ITI+DV +VID G+ KE SYD
Sbjct: 532 LLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDAL 591
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SK SA+QR GRAGR + G CYHLY + + ++Q+PEI R P+ LC
Sbjct: 592 NNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLC 651
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L+ +I +FL + L P + ++ AI L+ IGAL +E +T LG L L +
Sbjct: 652 LQIKSLNLG-SISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPME 710
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML ++ CLDP LT+A RDPF P ++K A AAK + + SD
Sbjct: 711 PKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTP--QDKKDLAEAAKSQFSR---DHSD 765
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A+E WK A++ +C + F+S + + +RK+ + L G I + S
Sbjct: 766 HLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSI 825
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAKVRLHPHSLNFKLSFK 953
C+ + AV+ G+YP + + N R F ++T +V L+ +S N + +
Sbjct: 826 CNSEGNDANLTRAVICYGMYPGICSVV---HNERSFSLKTMEDGQVLLYSNSENAR---E 879
Query: 954 KTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V++E + + + +R+ T L+L I+
Sbjct: 880 TKIPYPWLVFNEKIKVN-SVFLRDSTACSDSTLILFGGSIS 919
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 154/220 (70%), Gaps = 16/220 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+++++ R+ LP + + + + NQV++ISGETGCGKTTQ+PQF+LE ++G
Sbjct: 211 QRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFS 270
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 271 SIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLL 330
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L I++D+L L+LILMS
Sbjct: 331 ---VDR-----------NLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMS 376
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
ATLDA+ FS YFGG VI +PGFTYPV+S +LED+L + +
Sbjct: 377 ATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTR 416
>gi|449497595|ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1231
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 267/460 (58%), Gaps = 11/460 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ I LIE +L I GAILVF+ GW+DIN +D+LL++P D S+ +
Sbjct: 565 LSYWNPDSIGFNLIEHVLSYIVKKERPGAILVFMTGWDDINSLKDQLLSHPLLGDPSRVL 624
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +QK +F +P G RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD
Sbjct: 625 LLACHGSMASSEQKLIFDKPEDGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDAL 684
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SKA+A+QR GRAGR Q G CYHLY + + D+Q+PE+ R P++ LC
Sbjct: 685 NNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPKCVYDAFADYQLPELLRTPLQSLC 744
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I DFL L PP ++++NAI L+ IGAL E +T LG+ L L V
Sbjct: 745 LQIKSLQLG-SISDFLSNALQPPEPLSVQNAIDYLKIIGALDNKENLTVLGKHLSVLPVE 803
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP +T+ RDPF +P ++K A +AK A+ SD
Sbjct: 804 PKLGKMLILGAIFNCLDPIMTIVAGLSVRDPFLMP--SDKKDLAESAKAHFAA--RDCSD 859
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA++ A++ W++A+++ +C + F+S + + +RKQ L G + D
Sbjct: 860 HLALVRAYQGWRDAEKQQSGYEYCWRNFLSMQTLRAIDSLRKQFFFLLKDAGLVDYDSEK 919
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
C+ + +I AV+ AGL+P + + +K ++T +V L+ +S+N + K
Sbjct: 920 CNISNHDEHLIRAVICAGLFPGICSV--VNKEKSVALKTMEDGQVMLYSNSVN--AGYPK 975
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V++E + + + +R+ T V LLL ++
Sbjct: 976 I-PYPWLVFNEKVKVN-SVFLRDSTGVSDSVLLLFGGNVS 1013
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 160/230 (69%), Gaps = 18/230 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
++++E R LP ++ + + NQVV++SGETGCGKTTQ+PQ++LE ++G +C
Sbjct: 302 QKMIEFRKSLPAFKEREALLKAISENQVVVVSGETGCGKTTQLPQYILESEIEAARGASC 361
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 362 SIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLL 421
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ ++H+IVDEIHER DF++ +++D+LP P LRLILMS
Sbjct: 422 ---VDR-----------NLKGVSHVIVDEIHERGMNEDFLVIVLKDLLPRRPDLRLILMS 467
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI--LKSAESNHLD 404
ATL+A+ FS YFGG P + +PGFTYPV++ +LE++L I K N +D
Sbjct: 468 ATLNAELFSSYFGGAPTMHIPGFTYPVRAHFLENILEITGYKLTSYNQID 517
>gi|145361138|ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
gi|10178028|dbj|BAB11511.1| ATP-dependent RNA helicase A-like protein [Arabidopsis thaliana]
gi|332003418|gb|AED90801.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
Length = 1161
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 286/509 (56%), Gaps = 18/509 (3%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQ 550
+ K +T QL ++ + ++ ++++ + + +S + D L++ P+ I LIE
Sbjct: 470 QEKTWKTQKQLMPRKRKNQITTLVEEALSKSNFESYNSRTRDS-LSSWMPDCIGFNLIEA 528
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
+L IC GA+LVFL GW+DI D++ A+P D ++ +++ H + + +Q+ +
Sbjct: 529 VLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLI 588
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
F+R PP RKI+L+TN+AE +ITI+DVV+V+D G+ KE +YD NN L SW+S+ASA
Sbjct: 589 FERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASA 648
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFL 730
+QR GRAGR G CYHLY + + ++Q+PE+ R P+ LCLQ+K L +I +FL
Sbjct: 649 RQRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVE-SIAEFL 707
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
L P S+ ++NAI L+ IGAL E +T+LG+ L L V P + KML + C
Sbjct: 708 SAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCF 767
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+ RDPF LP ++K A +AK ++ SD +A++ AFE WK+A++
Sbjct: 768 DPILTIVSGLSVRDPFLLP--QDKKDLALSAKLRFSA--KDYSDHMALVRAFEGWKDAER 823
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS---SCSHNARVPGIIHA 907
G FC + F+S+ + + +RKQ L + G + +D++ SHN ++ A
Sbjct: 824 EGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQ---SLVRA 880
Query: 908 VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
V+ +GL+P +A + H+ +T +V L+ +S+N + T P +V+ E
Sbjct: 881 VICSGLFPGIASV--VHRETSMSFKTMDDGQVSLYANSVNSRFP---TIPYPWLVFGEKV 935
Query: 968 RGDGGMHVRNCTVVGPLPLLLLATEIAVA 996
+ + + +R+ T V L+L ++
Sbjct: 936 KVNAVL-IRDSTGVPDSSLILFGGSLSTG 963
Score = 229 bits (585), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 163/235 (69%), Gaps = 16/235 (6%)
Query: 162 AMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQV 221
+M++ ++ ++ R ++E R LP K+ + + NQV+++SGETGCGKTTQ+
Sbjct: 234 SMRMRNMQRTWQESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQL 293
Query: 222 PQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK 279
PQ++LE I S +G C I+CTQPRRISA +V+ER+S ERGE +G+ +G+K+RLE GK
Sbjct: 294 PQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGK 353
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
++ ++FCT+G+LLR L+S +++ +TH+ VDEIHER DF++ +
Sbjct: 354 NTHLLFCTSGILLRRLLSD--------------RNLNGVTHVFVDEIHERGMNEDFLIIV 399
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++++LP P LRL+LMSATL+A+ FS Y+GG P I +PGFT+PVK+ +LEDVL I
Sbjct: 400 LKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLEI 454
>gi|449527633|ref|XP_004170814.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36-like, partial [Cucumis sativus]
Length = 599
Score = 282 bits (722), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 222/385 (57%), Gaps = 10/385 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ NP+ + LIE LL +IC GAILVF+ GW+DI+ +++L ++P D ++ +
Sbjct: 219 LSCWNPDCLGFNLIEYLLVRICESETPGAILVFMTGWDDISSLKEKLQSHPLLGDPTRVM 278
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F P G RK++L+TNIAET+ITI+DVVYV+D G+ KE SYD
Sbjct: 279 LLACHGSMASSEQRLIFTEPDKGVRKVVLATNIAETSITINDVVYVLDCGKAKETSYDAL 338
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SK SA+QR GRAGR Q G CYHLY + S ++Q+PEI R P++ LC
Sbjct: 339 NNTPCLLPSWISKVSAQQRRGRAGRVQPGECYHLYPRCVFGSFSEYQLPEILRTPLQSLC 398
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L P + ++NAI L+ IGA E +T LG L L +
Sbjct: 399 LQIKSLKLG-SISEFLSRALQSPELLAVQNAIEYLKIIGAFDESENLTVLGRYLTMLPME 457
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP +T+ RDPF P+ + A ++F SD
Sbjct: 458 PKLGKMLIVGAIFNCLDPIMTVVAGLSVRDPFLTPLEKKDAAEAAKSQFS-----QDHSD 512
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
LA+I A+ WK A++ FC + F+S M + +RK+ L G + D S
Sbjct: 513 HLAIIRAYGAWKEAERNYGGYDFCWKNFLSIQSMKAIDSLRKEFFXLLRDTGLV--DGYS 570
Query: 895 CSHNARV--PGIIHAVLMAGLYPMV 917
++NA +I AV+ GLYP V
Sbjct: 571 DTYNAWSLDEQLIRAVICNGLYPGV 595
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 118/168 (70%), Gaps = 16/168 (9%)
Query: 229 IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS--SIVFC 286
I +G C I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++F
Sbjct: 8 ILFRGAVCSIICTQPRRISAMSVSERVAFERGEKLGESVGYKVRLEGMKGRDAILHLLFR 67
Query: 287 TNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS 346
T G+LLR L+ V R ++ +TH+IVD+IHER DF+L +++D+LP
Sbjct: 68 TMGILLRRLL---VVR-----------NLKGITHVIVDKIHERGMNEDFLLIVLKDLLPR 113
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
P LRLILMSATLDA+ FS YFGG +I +PGFT+PV++ +LED+L +
Sbjct: 114 RPELRLILMSATLDAELFSSYFGGAQIIHIPGFTHPVRTHFLEDILEM 161
>gi|357115628|ref|XP_003559590.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Brachypodium distachyon]
Length = 1121
Score = 282 bits (721), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 272/473 (57%), Gaps = 17/473 (3%)
Query: 496 RTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKI 555
+T QL ++ + ++ +++ ++N+ ++ + D LA NP+ I LIE +L I
Sbjct: 461 KTQRQLLPRKRKNQITTLVEDALQNSNFETYGSRTRDS-LANWNPDCIGFNLIEAVLCHI 519
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
C GA+LVF+ GW+DI+ +D+L A+P D ++ +++ H + + +Q+ +F++ P
Sbjct: 520 CRKERPGAVLVFMTGWDDISSLKDQLKAHPLLGDPNRVLLLSCHGSMATAEQRLIFEKAP 579
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAG 675
P RK++L+TN+AE +ITI+D+V+V+D G+ KE +YD NN L SW+SKASA+QR G
Sbjct: 580 PNVRKVVLATNMAEASITINDIVFVMDCGKAKETTYDALNNTPCLLPSWISKASARQRRG 639
Query: 676 RAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLD 735
RAGR Q G CYHLY + + ++Q+PE+ R P+ LCLQ+K L +I +FL L
Sbjct: 640 RAGRVQPGECYHLYPRCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVG-SIGEFLSAALQ 698
Query: 736 PPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALT 795
PP ++NA+ L+ IGAL +E +T+LG L L V P + KML + C+DP LT
Sbjct: 699 PPEPRAVQNAVEFLKKIGALDENENLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPVLT 758
Query: 796 LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
+ RDPF LP ++K A AK ++ SD +A++ A+E WK+A++ G
Sbjct: 759 VVAGLSARDPFLLP--QDKKDLAGTAKSRFSA--KDYSDHMALVRAYEGWKDAEREGSGY 814
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS---SCSHNARVPGIIHAVLMAG 912
+C + F+S+ + + +RKQ L G I D S S SHN ++ ++ +G
Sbjct: 815 EYCWRNFLSAQTLQAIHSLRKQFSYILKDAGLIDSDGSTNNSLSHNQ---SLVRGIICSG 871
Query: 913 LYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDE 965
L+P ++ + H+ +T +V ++ +S+N K +T P +V+ E
Sbjct: 872 LFPGISSV--VHRENSMSFKTMDDGQVLVYANSVNAKY---QTIPYPWLVFGE 919
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 160/229 (69%), Gaps = 18/229 (7%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETCK 237
++VE R LP K+ + + + NQV++ISGETGCGKTTQ+PQF+LE I S +G C
Sbjct: 238 KMVEFRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCN 297
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I+CTQPRRISA +V+ER+S ERGEN+G+++GYK+RLE GK + ++FCT+G+LLR L+S
Sbjct: 298 IICTQPRRISAMAVSERVSTERGENLGESVGYKVRLEGMKGKDTHLLFCTSGILLRRLLS 357
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+++ ++H+ VDEIHER DF+L +++D+L LRLILMSA
Sbjct: 358 D--------------RNLNGVSHVFVDEIHERGMNEDFLLIVLKDLLSRRQDLRLILMSA 403
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--SILKSAESNHLD 404
TL+A+ FS YFGG P I +PGFT+PV++ +LED+L + K SN LD
Sbjct: 404 TLNAELFSSYFGGAPTIHIPGFTHPVRAHFLEDILERTGYKMTPSNQLD 452
>gi|20197904|gb|AAM15307.1| putative RNA helicase A [Arabidopsis thaliana]
Length = 640
Score = 282 bits (721), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 254/456 (55%), Gaps = 14/456 (3%)
Query: 540 PELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH 599
P+ I LIE LL IC + G IL+FL GW+DI+ +++L +P F + +++ H
Sbjct: 4 PDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACH 63
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
+ + +Q+ +F+ P G RKI+L+TNIAET+ITI+DV +VID G+ KE SYD NN
Sbjct: 64 GSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPC 123
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L SW+SK SA+QR GRAGR + G CYHLY + + ++Q+PEI R P+ LCLQ+K
Sbjct: 124 LLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKS 183
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
L+ +I +FL + L P + ++ AI L+ IGAL +E +T LG L L + P + K
Sbjct: 184 LNLG-SISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGK 242
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
ML ++ CLDP LT+A RDPF P ++K A AAK + + SD LA++
Sbjct: 243 MLILGAILGCLDPILTVAAGLSVRDPFLTP--QDKKDLAEAAKSQFSR---DHSDHLALV 297
Query: 840 AAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNA 899
A+E WK A++ +C + F+S + + +RK+ + L G I + S C+
Sbjct: 298 RAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEG 357
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAKVRLHPHSLNFKLSFKKTDDC 958
+ AV+ G+YP + + N R F ++T +V L+ +S N + +
Sbjct: 358 NDANLTRAVICYGMYPGICSVV---HNERSFSLKTMEDGQVLLYSNSENAR---ETKIPY 411
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V++E + + + +R+ T L+L I+
Sbjct: 412 PWLVFNEKIKVN-SVFLRDSTACSDSTLILFGGSIS 446
>gi|326915076|ref|XP_003203847.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Meleagris
gallopavo]
Length = 1375
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 314/573 (54%), Gaps = 86/573 (15%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDS------MKQQLLDKY-------- 534
+L A+ RTA + E E A +++ ++A+ DS +QLL +Y
Sbjct: 741 KLTARHKRTAFE--EVEEDLRRAGLLED-TDSAVKDSDPDQKLTLKQLLKRYKGVNKTVL 797
Query: 535 --LATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF-- 587
++ ++ + ++L LIE LL I GA+L+FLPG +I ++L +N F
Sbjct: 798 KTMSVMDLDKVNLELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNN 857
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
R + + V+ PLHS + S +Q+ VF RPP G KII+STNIAET++TIDDVVYVIDSG+MK
Sbjct: 858 RHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMK 917
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIK 706
EK YDP + +L+ ++VS+A+A QR GRAGR +G+C+HL+S L Q+PEI+
Sbjct: 918 EKRYDPSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQ 977
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E+LCL++K+L+ ++ L + ++PP + ++R + + LQD+GAL+ DEK+T L
Sbjct: 978 RVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPL 1037
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V + K++ F + CLDPALT+A + ++ PF P ++++ A K +
Sbjct: 1038 GYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPW--DKREEANKKKLD 1095
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMR-----KQ 877
A G SD LA++ A++ W+ + + G +A +C + F+S V+ LL + K+
Sbjct: 1096 FAV---GNSDYLALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQTLLSLWEIASLKR 1152
Query: 878 LQTELIKN-GFIPEDVSS---------------------CSHNARVPGIIHAVLMAGLYP 915
TEL+ + GF+ E + + + NA +I A+L A LYP
Sbjct: 1153 QFTELLSDIGFVKEGLRARDIERKWSQEGDGVLDATGEEANSNAENIKLISAMLCAALYP 1212
Query: 916 MVARLRPPHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDD 957
V +++ P ++ +T+ GA V +HP SL + + +
Sbjct: 1213 NVVQVKKPEG---KYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSLPLQ---TRHFE 1266
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P +VY E + + +R+C++V PL+LL
Sbjct: 1267 SPYLVYHEKIK-TSRVFIRDCSMVSVYPLVLLG 1298
Score = 210 bits (534), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 153/229 (66%), Gaps = 17/229 (7%)
Query: 171 RIEKDAN-LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
R++K + + ++ ER KLP ++ I + S+QV+++SG TGCGKTTQ+PQF+L+
Sbjct: 509 RLKKSSRRFQSMLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDAS 568
Query: 230 W--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
S I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT
Sbjct: 569 LQGSPNTVANIICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCT 628
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L +G L+ +TH+IVDE+HER SDF+L +++D++
Sbjct: 629 TGVLLRRL--EGDLTLQ------------GITHVIVDEVHERTEESDFLLLVLKDIMVQR 674
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
P LR+ILMSATL+A+ FSQYF CP+I +PG T+PV F+LEDV+++ +
Sbjct: 675 PDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVIAMTR 723
>gi|348569048|ref|XP_003470310.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX29-like
[Cavia porcellus]
Length = 1363
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 185/482 (38%), Positives = 262/482 (54%), Gaps = 42/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D LL+N + ++
Sbjct: 834 MNPHKINLDLILELLVYLDRSPQFKNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFHSERY 892
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 893 KVIALHSILSTQDQAAAFTPPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 952
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L +++SKASA QR GRAGR + G C+ LY++ R S ++ VPEI R+P+EEL
Sbjct: 953 SSQMSSLVETFISKASALQRQGRAGRVRDGFCFRLYTRERFESFMNYSVPEILRVPLEEL 1012
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1013 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1068
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PF PI K A AK LA
Sbjct: 1069 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIG--RKDEADLAKSALAI-- 1124
Query: 830 GGQSDQLAVIAAFECWKNAKQRGQ---EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L +L+K
Sbjct: 1125 -ADSDHLTIYNAYLGWKQARQEGGYRFEITYCRRNFLNRTSLLTLEDVKQEL-IKLVKAA 1182
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
S+ R P ++ AVL AGLY V ++ + VET
Sbjct: 1183 GFSSSASTSWEGKRAPPTLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDITEKLACVVET 1242
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R G +++R T++ P P+LL EI
Sbjct: 1243 AQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKIRY-GRVYLRETTLITPFPVLLFGGEI 1295
Query: 994 AV 995
V
Sbjct: 1296 EV 1297
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 544 VRNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 603
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G G GY+IR+ES
Sbjct: 604 LLEDLLLNEWETSK-CNIVCTQPRRISAVSLATRVCDELGCESGPGGRNSLCGYQIRMES 662
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVL+R +L+E S +S ++H+IVDE+HER SDF
Sbjct: 663 RASESTRLLYCTTGVLIR--------KLQEDSL------LSNVSHVIVDEVHERSVQSDF 708
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L+I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 709 LLSILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 765
>gi|24641139|ref|NP_572663.1| CG1582 [Drosophila melanogaster]
gi|21428832|gb|AAM50135.1| GH07148p [Drosophila melanogaster]
gi|22832065|gb|AAF47973.2| CG1582 [Drosophila melanogaster]
gi|220947156|gb|ACL86121.1| CG1582-PA [synthetic construct]
gi|220956700|gb|ACL90893.1| CG1582-PA [synthetic construct]
Length = 1288
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 270/499 (54%), Gaps = 62/499 (12%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR-DTS 591
T+NPELI E +L+ I S D G IL+FLPG+ +I D LL N F
Sbjct: 729 TINPELI-----ESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAG 783
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
KF+++PLHS + Q VFK+ PPG RKI+LSTNIAET++TIDD V+V+D G MKEK +
Sbjct: 784 KFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCF 843
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKRIPI 710
D N+ +L WVS+A+AKQR GRAGR G+C HLY+ R Q VPEI+R+P+
Sbjct: 844 DSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPL 903
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E++ L++K L + N L +TL+ P ++ A+ L+D+GAL ++++T LG L
Sbjct: 904 EQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHL 963
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ + + CLD LT+A + PF P+ N++ A K A
Sbjct: 964 AALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPL--NKRTEADKCKRMFAL- 1020
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G SD L V+ A+ W + +RG A + S++F+S + + ++ Q L+
Sbjct: 1021 --GNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSI 1078
Query: 886 GFIPEDV-----SSC-----------SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
GF+P DV ++C +HN ++ ++L A LYP + ++ P R
Sbjct: 1079 GFVPIDVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTP---DRV 1135
Query: 930 FVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
+++TAGGA V++HP S+N ++S + P +V+ E R
Sbjct: 1136 YIQTAGGAVPREPSHHDLRFKTRGDGYVKIHPSSVNSQVSVFQA---PFLVFQEKVRT-S 1191
Query: 972 GMHVRNCTVVGPLPLLLLA 990
+++R+C+++ + ++L A
Sbjct: 1192 AIYIRDCSMLPLIAMVLFA 1210
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 152/230 (66%), Gaps = 23/230 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
K+ ++I++ R +LP + + I + ++S+ VV+ISGETGCGK+TQVPQF+L++ + +
Sbjct: 439 KEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRA 498
Query: 234 ---------ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
+I+CTQPRR+SA VAER++ ER + IG +GY+IRLE+K + + +
Sbjct: 499 LQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLS 558
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S + + ++TH+IVDE+HER SDF+L I++++L
Sbjct: 559 FCTTGILLRRLASDPL--------------LGSVTHVIVDEVHERSEESDFLLLILKNLL 604
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L++ILMSATL+A FS YFGG PV+ +PG T+PV+ +LED+L +
Sbjct: 605 RERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEM 654
>gi|297806475|ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316958|gb|EFH47380.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1160
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 285/509 (55%), Gaps = 18/509 (3%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQ 550
+ K +T QL ++ + + ++++ + + +S + D L++ P+ I LIE
Sbjct: 471 QEKTWKTQKQLMPRKRKNLITTLVEEALSKSNFESYNSRTRDS-LSSWMPDCIGFNLIEA 529
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
+L IC GA+LVFL GW+DI D++ A+P D ++ +++ H + + +Q+ +
Sbjct: 530 VLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLI 589
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
F+R PP RKI+L+TN+AE +ITI+DVV+V+D G+ KE +YD NN L SW+S+ASA
Sbjct: 590 FERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASA 649
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFL 730
+QR GRAGR G CYHLY + + ++Q+PE+ R P+ LCLQ+K L +I +FL
Sbjct: 650 RQRRGRAGRLLPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVE-SIAEFL 708
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
L P S+ ++NAI L+ IGAL E +T+LG+ L L V P + KML + C
Sbjct: 709 SAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCF 768
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+ RDPF LP ++K A +AK ++ SD +A++ AFE WK+A++
Sbjct: 769 DPILTIVSGLSVRDPFLLP--QDKKDLALSAKLRFSA--KDYSDHMALVRAFEGWKDAER 824
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS---SCSHNARVPGIIHA 907
G FC + F+S+ + + +RKQ L + G + +D++ SHN ++ A
Sbjct: 825 EGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLTLNNKLSHNQ---SLVRA 881
Query: 908 VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
V+ +GL+P +A + H+ +T +V L+ +S+N + T P +V+ E
Sbjct: 882 VICSGLFPGIASV--VHRETSMSFKTMDDGQVSLYANSVNSRFP---TIPYPWLVFGEKV 936
Query: 968 RGDGGMHVRNCTVVGPLPLLLLATEIAVA 996
+ + + +R+ T V L+L ++
Sbjct: 937 KVNAVL-IRDSTGVPDSSLILFGGALSTG 964
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 163/235 (69%), Gaps = 16/235 (6%)
Query: 162 AMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQV 221
+M++ ++ ++ R ++E R LP K+ + + NQV+++SGETGCGKTTQ+
Sbjct: 235 SMRMRNMQRTWQESPEGRTMLEFRKSLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQL 294
Query: 222 PQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK 279
PQ++LE I S +G C I+CTQPRRISA +V+ER+S ERGE +G+ +G+K+RLE GK
Sbjct: 295 PQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGK 354
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
++ ++FCT+G+LLR L+S +++ +TH+ VDEIHER DF++ +
Sbjct: 355 NTHLLFCTSGILLRRLLSD--------------RNLNGVTHVFVDEIHERGMNEDFLIIV 400
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++++LP P LRLILMSATL+A+ FS Y+GG P I +PGFT+PVK+ +LEDVL I
Sbjct: 401 LKELLPRRPDLRLILMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLEI 455
>gi|126316693|ref|XP_001381009.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Monodelphis domestica]
Length = 1369
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/482 (37%), Positives = 256/482 (53%), Gaps = 40/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F ++
Sbjct: 838 MNPHKINLDLILELLAFLDRSPHFRNVEGAVLIFLPGLAHIQQLYDLLSNDRRFYSKERY 897
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 898 KLIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 957
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R S D+ VPEI R+P+EEL
Sbjct: 958 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFESFMDYSVPEILRVPLEEL 1017
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA E K+T LG+ L
Sbjct: 1018 CLHIM----KCNLGSPEDFLAKALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLA 1073
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1074 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSTLA 1128
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + +A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1129 LANSDHLTIYSAYLGWKKARQEGGYRSEVAYCRRNFLNRTALLTLEDVKQELIKLVKAAG 1188
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPP-----HKNGRRFVET 933
F S+ R ++ AVL AGLY V ++ + VET
Sbjct: 1189 FTSATTSNGWDANRATQTLSLQEIALLKAVLTAGLYDSVGKIIYTTSIDVTEKLACIVET 1248
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1249 AQG-KAQVHPSSVNRDLQV-----YGWLLYQEKVRY-AKVYLRETTLISPFPILLFGGDI 1301
Query: 994 AV 995
V
Sbjct: 1302 EV 1303
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK+TQVP F
Sbjct: 547 VRNLFRKLQSTPRYQKLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHF 606
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W G+ C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 607 LLEDLLLNEWGSGK-CNIVCTQPRRISAVSLATRVCEELGCENGPGGKNSLCGYQIRMES 665
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +++CT GVLLR L G+ ++ ++H+IVDE+HER SDF
Sbjct: 666 RASDATRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHERSVQSDF 711
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LEDV+
Sbjct: 712 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDVV 768
>gi|302784188|ref|XP_002973866.1| hypothetical protein SELMODRAFT_173775 [Selaginella moellendorffii]
gi|300158198|gb|EFJ24821.1| hypothetical protein SELMODRAFT_173775 [Selaginella moellendorffii]
Length = 900
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 288/573 (50%), Gaps = 84/573 (14%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFR--DTSKFVIIPLHSMVPSVQQKKVFKRPPPG 617
E G++LVFLPG +I+K + RL + K ++ LH + S QQK+VF RPP G
Sbjct: 389 EAGSVLVFLPGMMEISKLQARLQNSKQLSAYGVEKKWVLALHGSLSSEQQKRVFVRPPRG 448
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
RK++L+TN+AET+ITIDD++YVID+GR KE SYD +S LQ +WVSKAS KQRAGRA
Sbjct: 449 VRKVVLATNVAETSITIDDILYVIDTGRHKEMSYDHSKGLSCLQETWVSKASCKQRAGRA 508
Query: 678 GRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
GR Q G C LYS+ + + D Q+PEI+R+ +E LCL+VK L ++ L K PP
Sbjct: 509 GRVQPGCCLRLYSKKQFKAFDDHQLPEIQRVSLEGLCLKVKSL-LQSKVQSTLSKMPTPP 567
Query: 738 VSVTIRNAIIVLQDIGAL-SLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
+ A+ L+DI A + +E +T LG L + V + KML F ++ CLDP LT+
Sbjct: 568 DPDAVIAAVQSLKDINAFDAENETLTPLGRHLTQMPVDARVGKMLVFGCMLKCLDPVLTI 627
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW 856
A + R F P + ++ A AK L+ +SD +A++AA+ W A++ G EA
Sbjct: 628 AASMSGRPVFFSP--QDNREEARLAKLRLSGT--SKSDHIALVAAYNGWITARRDGWEAE 683
Query: 857 --FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLY 914
+C+ F+S + + R+ L + GF+P D+SS ++ +I AV+ AG Y
Sbjct: 684 KDYCASNFLSREALASIEASREDYLNVLRELGFVPGDISSLEASSNSVRVIKAVVCAGFY 743
Query: 915 PMVARLRPPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTD 956
P +AR+R P K +V+T GG +V LHP S+NF ++
Sbjct: 744 PKIARVRHPEKT---YVQTEGGTVPKLAAAHEVQYFTRLDGRVFLHPASVNFSAGHFES- 799
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDAD 1016
P +V ++ + ++ R ++V LL+ I+V
Sbjct: 800 --PWLVVTDMVK-TSKVYARETSMVPAYSLLIFGGSISV--------------------- 835
Query: 1017 ENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSV 1076
+H + +VVD WL F + A I LR+R+
Sbjct: 836 -----------------RHERQM---------IVVDGWLEFEAPARIAVLIKELRKRVDA 869
Query: 1077 AILFKVTHPQKALPPVLEASMYAMASILSYDGF 1109
+L K +P L A + A+ +L DGF
Sbjct: 870 LLLEKTGNP--GLDISSSAVVAALLRLLETDGF 900
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 140/232 (60%), Gaps = 22/232 (9%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI- 229
R++ I+ R LP+ K I + + N V +I GETGCGK+TQ+PQ++LE
Sbjct: 71 RLQTSRQYADIMTSRRSLPVFKRKSEILAGISCNPVTIICGETGCGKSTQIPQYVLEKEI 130
Query: 230 -WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTN 288
G +C I+CTQPRRISA +A R+++ER E +G +GY +RL+S K + ++FCT
Sbjct: 131 EMGNGGSCNIICTQPRRISALGLAARVAMERNEVVGRVVGYSVRLDSCCSKFTRLLFCTT 190
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP-SY 347
G+LLR L+S ++ +TH+IVDE+HER SD +L ++R+ + +
Sbjct: 191 GILLRRLLSD--------------PELEGVTHVIVDEVHERTLESDLLLLLLREHIQRTR 236
Query: 348 PHLRLILMSATLDADRFSQYF----GGCP-VIQVPGFTYPVKSFYLEDVLSI 394
+R+ILMSAT + FS YF G P +++V GFT+PV+ +L+DVL +
Sbjct: 237 GKIRVILMSATAETSLFSDYFQQGLGLRPELLRVQGFTFPVRELHLDDVLEL 288
>gi|270005433|gb|EFA01881.1| hypothetical protein TcasGA2_TC007486 [Tribolium castaneum]
Length = 1241
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 273/502 (54%), Gaps = 58/502 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR 588
K L ++PE+++ LIE +L I + G ILVFLPG +I D+L +P F
Sbjct: 677 KNLLLMDPEVVNNELIETVLTWIVSGEHNYPRKGTILVFLPGIAEITSLYDQLAVHPEFG 736
Query: 589 DTS-KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
S K++++PLHS + S +Q +F +P RKIILSTNIAET++TIDD V+VIDSGRM+
Sbjct: 737 TRSQKYLVLPLHSSLSSEEQAMIFMKPK-NLRKIILSTNIAETSVTIDDCVFVIDSGRMR 795
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS--QLRAASLPDFQVPEI 705
EK +DP N+ +L++ WV++A+A QR GRAGR AG+C+HLY+ + R LP +PEI
Sbjct: 796 EKHFDPNRNMESLETVWVTRANALQRKGRAGRVMAGVCFHLYTSNRFRHQMLPQ-PIPEI 854
Query: 706 KRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
RIP+E+L L +K+L + ++ D + ++PP+ + AI+ LQD+GAL ++++T
Sbjct: 855 HRIPLEQLILNIKILQNFEDRDVCDVIDGLIEPPLKEHVETAIVRLQDVGALDTEKQLTP 914
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG L L V + K+L + + C+D ALT+A + PF P ++ KF
Sbjct: 915 LGHHLAALPVDVRIGKLLLYGAIFSCVDSALTMAACLSNKSPFVTPFRKRDEANEKKKKF 974
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTE 881
+ G SD + V+ A++ W++ ++ A F ++ F+S + + ++ Q
Sbjct: 975 AV-----GYSDHITVLMAYKKWQSVYKKSSLAGRNFANENFLSQKTLVTIADIKHQFLEY 1029
Query: 882 LIKNGFIPEDV----------------SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
L+ GFI ++ + + N ++ A+L A LYP V ++ P K
Sbjct: 1030 LVDIGFIAANLDGKRRSGDDDVLAITGNEFNRNGENFNVLAAILCAALYPNVIKVLTPPK 1089
Query: 926 NGRRFVETAGGA-----------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITR 968
+ +V+TAGGA V LHP S+NF K P +VY E +
Sbjct: 1090 S---YVKTAGGAIPKDNEAKDFQFQTVKETVFLHPSSVNFS---AKNFPSPYLVYQEKVK 1143
Query: 969 GDGGMHVRNCTVVGPLPLLLLA 990
++ R+CTV+ + L+L +
Sbjct: 1144 T-SKVYFRDCTVIPVISLVLFS 1164
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 154/238 (64%), Gaps = 24/238 (10%)
Query: 160 EIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTT 219
+I K +SL KD ++++ R KLP + I +T+ +QVV+ISGETGCGK+T
Sbjct: 394 KIVAKFKSLV----KDKKYLEMLQYRKKLPAWGLMNDILNTIQQSQVVVISGETGCGKST 449
Query: 220 QVPQFLLEHIW-----SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
QVPQ++L+ W + + +IVCTQPRRISA SVAER++ ER IG+ +GY+IRLE
Sbjct: 450 QVPQYILDD-WLVNYANDRKHVEIVCTQPRRISAISVAERVAEERVAKIGNTVGYQIRLE 508
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
SK ++ + FCT G+LLR L S+ + +THIIVDE+HER SD
Sbjct: 509 SKVSVNTRLTFCTTGILLRRLESEPT--------------LPQVTHIIVDEVHERSEQSD 554
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
F+L I++ +LP P L++ILMSATL+A FS YFG P++ +PG T+PV+ ++LE +
Sbjct: 555 FLLLILKQILPFRPDLKVILMSATLNAQLFSDYFGEIPILTIPGRTFPVEQYFLETIF 612
>gi|195350776|ref|XP_002041914.1| GM11277 [Drosophila sechellia]
gi|194123719|gb|EDW45762.1| GM11277 [Drosophila sechellia]
Length = 1271
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 270/499 (54%), Gaps = 62/499 (12%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR-DTS 591
T+NPELI E +L+ I S D G IL+FLPG+ +I D LL N F
Sbjct: 712 TINPELI-----ESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAG 766
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
KF+++PLHS + Q VFK+ PPG RKI+LSTNIAET++TIDD V+V+D G MKEK +
Sbjct: 767 KFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCF 826
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKRIPI 710
D N+ +L WVS+A+AKQR GRAGR G+C HLY+ R Q VPEI+R+P+
Sbjct: 827 DSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPL 886
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E++ L++K L + N L +TL+ P ++ A+ L+D+GAL ++++T LG L
Sbjct: 887 EQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHL 946
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ + + CLD LT+A + PF P+ N++ A K A
Sbjct: 947 AALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPL--NKRTEANKCKRMFAL- 1003
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G SD L V+ A+ W + +RG A + S++F+S + + ++ Q L+
Sbjct: 1004 --GNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSI 1061
Query: 886 GFIPEDV-----SSC-----------SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
GF+P +V ++C +HN ++ ++L A LYP + ++ P R
Sbjct: 1062 GFVPINVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTP---DRV 1118
Query: 930 FVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
+++TAGGA V++HP S+N ++S + P +V+ E R
Sbjct: 1119 YIQTAGGAVPREPSHHDLRFKTRGDGYVKIHPSSVNSQVSVFQA---PFLVFQEKVR-TS 1174
Query: 972 GMHVRNCTVVGPLPLLLLA 990
+++R+C+++ + ++L A
Sbjct: 1175 AIYIRDCSMLPLIAMVLFA 1193
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 56/84 (66%), Gaps = 9/84 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
K+ ++I++ R +LP + + I + ++S+ VV+ISGETGCGK+TQVPQF+L++ + +
Sbjct: 419 KEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRA 478
Query: 234 ---------ETCKIVCTQPRRISA 248
+I+CTQPRR+SA
Sbjct: 479 LQLPAKDNLPHVEIICTQPRRLSA 502
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 364 FSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
FS YF G PV+ +PG T+PV+ +LED+L +
Sbjct: 607 FSDYFSGAPVLDIPGRTFPVQQLFLEDILEM 637
>gi|189236376|ref|XP_969185.2| PREDICTED: similar to ATP-dependent RNA helicase [Tribolium
castaneum]
Length = 1311
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 273/502 (54%), Gaps = 58/502 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR 588
K L ++PE+++ LIE +L I + G ILVFLPG +I D+L +P F
Sbjct: 747 KNLLLMDPEVVNNELIETVLTWIVSGEHNYPRKGTILVFLPGIAEITSLYDQLAVHPEFG 806
Query: 589 DTS-KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
S K++++PLHS + S +Q +F +P RKIILSTNIAET++TIDD V+VIDSGRM+
Sbjct: 807 TRSQKYLVLPLHSSLSSEEQAMIFMKPK-NLRKIILSTNIAETSVTIDDCVFVIDSGRMR 865
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS--QLRAASLPDFQVPEI 705
EK +DP N+ +L++ WV++A+A QR GRAGR AG+C+HLY+ + R LP +PEI
Sbjct: 866 EKHFDPNRNMESLETVWVTRANALQRKGRAGRVMAGVCFHLYTSNRFRHQMLPQ-PIPEI 924
Query: 706 KRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
RIP+E+L L +K+L + ++ D + ++PP+ + AI+ LQD+GAL ++++T
Sbjct: 925 HRIPLEQLILNIKILQNFEDRDVCDVIDGLIEPPLKEHVETAIVRLQDVGALDTEKQLTP 984
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG L L V + K+L + + C+D ALT+A + PF P ++ KF
Sbjct: 985 LGHHLAALPVDVRIGKLLLYGAIFSCVDSALTMAACLSNKSPFVTPFRKRDEANEKKKKF 1044
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTE 881
+ G SD + V+ A++ W++ ++ A F ++ F+S + + ++ Q
Sbjct: 1045 AV-----GYSDHITVLMAYKKWQSVYKKSSLAGRNFANENFLSQKTLVTIADIKHQFLEY 1099
Query: 882 LIKNGFIPEDV----------------SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
L+ GFI ++ + + N ++ A+L A LYP V ++ P K
Sbjct: 1100 LVDIGFIAANLDGKRRSGDDDVLAITGNEFNRNGENFNVLAAILCAALYPNVIKVLTPPK 1159
Query: 926 NGRRFVETAGGA-----------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITR 968
+ +V+TAGGA V LHP S+NF K P +VY E +
Sbjct: 1160 S---YVKTAGGAIPKDNEAKDFQFQTVKETVFLHPSSVNFS---AKNFPSPYLVYQEKVK 1213
Query: 969 GDGGMHVRNCTVVGPLPLLLLA 990
++ R+CTV+ + L+L +
Sbjct: 1214 T-SKVYFRDCTVIPVISLVLFS 1234
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 154/238 (64%), Gaps = 24/238 (10%)
Query: 160 EIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTT 219
+I K +SL KD ++++ R KLP + I +T+ +QVV+ISGETGCGK+T
Sbjct: 464 KIVAKFKSLV----KDKKYLEMLQYRKKLPAWGLMNDILNTIQQSQVVVISGETGCGKST 519
Query: 220 QVPQFLLEHIW-----SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
QVPQ++L+ W + + +IVCTQPRRISA SVAER++ ER IG+ +GY+IRLE
Sbjct: 520 QVPQYILDD-WLVNYANDRKHVEIVCTQPRRISAISVAERVAEERVAKIGNTVGYQIRLE 578
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
SK ++ + FCT G+LLR L S+ + +THIIVDE+HER SD
Sbjct: 579 SKVSVNTRLTFCTTGILLRRLESEPT--------------LPQVTHIIVDEVHERSEQSD 624
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
F+L I++ +LP P L++ILMSATL+A FS YFG P++ +PG T+PV+ ++LE +
Sbjct: 625 FLLLILKQILPFRPDLKVILMSATLNAQLFSDYFGEIPILTIPGRTFPVEQYFLETIF 682
>gi|296081073|emb|CBI18267.3| unnamed protein product [Vitis vinifera]
Length = 1162
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 281/504 (55%), Gaps = 22/504 (4%)
Query: 502 GEQENQPEVAQIIKKHMENALS----DSMKQQLLDKY-------LATVNPELIDLVLIEQ 550
G+++ Q++ + +N ++ D++ + + Y L+ P+ + LIE
Sbjct: 447 GQEKMWKTQKQLVPRKRKNKITALVEDALTKSSFENYSSGVRDSLSCWTPDCMGFNLIEA 506
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
+L IC GA+LVF+ GWEDI+ RD++ A+P D ++ +++ H + + +QK +
Sbjct: 507 VLCHICRKERPGAVLVFMTGWEDISCLRDQIRAHPLLGDPNRVLLLTCHGSMATSEQKLI 566
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
F++PPP RKI+L+TN+AE +ITI+DVV+V+D G+ KE +YD NN L SW+S+ASA
Sbjct: 567 FEKPPPNVRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASA 626
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFL 730
+QR GRAGR Q G CYHLY + ++Q+PE+ R P+ LCLQ+K L +I +FL
Sbjct: 627 RQRRGRAGRVQPGECYHLYPSCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVG-SIGEFL 685
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
L PP + ++NA+ L+ IGAL E +T LGE L L V P + KML + C
Sbjct: 686 SAALQPPEPLAVQNAVDFLKMIGALDEKENLTNLGEYLSMLPVDPKLGKMLIMGTIFRCF 745
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+ +DPF LP ++K A AK ++ SD +A++ A+E WK+A++
Sbjct: 746 DPILTIVAGLSVKDPFLLP--QDKKDLAGTAKSRFSA--KDYSDHMALVRAYEGWKDAER 801
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLM 910
G +C + F+S+ + + +RKQ L G + D ++ + + ++ A++
Sbjct: 802 EGSAYEYCWRNFLSAQTLQAIHSLRKQFSFILKDAGLLDADANTNNRLSHNQSLVRAIIC 861
Query: 911 AGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGD 970
+GL+P +A + P + +T +V L+ +S+N + +T P +V+ E + +
Sbjct: 862 SGLFPGIASVVP--RETSMSFKTMDDGQVLLYANSVNARY---QTIPYPWLVFGEKVKVN 916
Query: 971 GGMHVRNCTVVGPLPLLLLATEIA 994
+ +R+ T + L+L ++
Sbjct: 917 -TVFIRDSTGISDSILILFGGTLS 939
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 164/235 (69%), Gaps = 16/235 (6%)
Query: 162 AMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQV 221
++++ ++ ++ +++++ R LP K+ + + NQVV++SGETGCGKTTQ+
Sbjct: 212 SLRMRNMQRAWQESPEGKKMLDFRKSLPAFREKERLLQAIARNQVVVVSGETGCGKTTQL 271
Query: 222 PQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK 279
PQ++LE I S +G C I+CTQPRRISA SV+ER+S ERGE +G+++GYK+RLE GK
Sbjct: 272 PQYILESEIESGRGAFCSIICTQPRRISAMSVSERVSTERGEPLGESVGYKVRLEGMKGK 331
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
++ ++FCT+G+LLR L+S +++ +TH+ VDEIHER DF+L +
Sbjct: 332 NTHLLFCTSGILLRRLLSD--------------RNLNGITHVFVDEIHERGMNEDFLLIV 377
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++D+LP LRLILMSATL+A+ FS +FGG P I +PGFTYPV++ +LEDVL +
Sbjct: 378 LKDLLPRRRDLRLILMSATLNAELFSNFFGGAPTIHIPGFTYPVRAHFLEDVLEM 432
>gi|307111136|gb|EFN59371.1| hypothetical protein CHLNCDRAFT_137841 [Chlorella variabilis]
Length = 1495
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 181/501 (36%), Positives = 269/501 (53%), Gaps = 41/501 (8%)
Query: 533 KYLATVNPELIDLVLIEQLLRKI--CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDT 590
+ L+ ++ + +D L+EQL+ I +GA+LVFLPG +I + RL A+ F +
Sbjct: 927 RNLSVLDEDRLDFELLEQLVAHIDESQAGREGAVLVFLPGMGEIQELHSRLCASRRFAAS 986
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
S +VI PLHS V +Q++ F+ PPPG RK++L+TNIAET++TI+DVVYV+D+G++KE+
Sbjct: 987 SAWVI-PLHSTVSPSEQRQAFRVPPPGVRKVVLATNIAETSLTIEDVVYVVDAGKLKERR 1045
Query: 651 YDPYNNVSTLQSSWVSKAS----AKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEI 705
YD +S L WVS AS AKQR GRAGR + G+CY LY++ R + +Q PE+
Sbjct: 1046 YDASRGMSLLVEDWVSAASGKGGAKQRRGRAGRVRPGVCYGLYTRSRFEHRMRRYQAPEM 1105
Query: 706 KRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELG 765
R+P+EEL LQ+ LL FL + L PP ++ AI LQ++GAL+ E++T LG
Sbjct: 1106 VRVPLEELVLQIHLLALG-KAGSFLARVLQPPPDKSVAGAIRTLQEVGALTAGEELTPLG 1164
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
L L V + K+L + + CL PALT+A Y+ PF+ + RA AA
Sbjct: 1165 HHLASLPVDARIGKLLLLSASLGCLAPALTIAACLSYKSPFSAGAQQDAADRARAALAAP 1224
Query: 826 AS---LYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQ 879
S G QSD L ++AA + W A++ G + ++F+S ++ML MR Q
Sbjct: 1225 TSGTIAAGQQSDHLLMVAAMDGWLAARRVGAHKGARDYSRRHFLSEQALDMLADMRWQYA 1284
Query: 880 TELIKNGFIP------------EDVSSCSHNARVPG------------IIHAVLMAGLYP 915
L GF+ E ++ + A PG ++ AVL+A LYP
Sbjct: 1285 CMLADIGFVAGPGRGGGRAWMDERGAAFNRYASHPGAGWPAGLACWAAVVKAVLLAALYP 1344
Query: 916 MVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
VA + G+R G +V +HP S+ + ++ P +VY E R +
Sbjct: 1345 NVAVMDDEAAPGKRPGWHDGAGEVAVHPSSICHMVEAQQYQR-PYLVYLEKVR-TTRTFI 1402
Query: 976 RNCTVVGPLPLLLLATEIAVA 996
R+CTV P +LL +AVA
Sbjct: 1403 RDCTVASPAAILLFGGALAVA 1423
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 60/216 (27%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
R+ + +R+KLP++ + + + + + V ++SGETG GKTTQ
Sbjct: 695 RRWLADRAKLPVTETRAALVAALAEHDVAVVSGETGSGKTTQA----------------- 737
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RR +GY +RL+S + + ++FCT G+LLR L
Sbjct: 738 -----RR--------------------PVGYHVRLDSAATRDTRLLFCTTGILLRRL--- 769
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP----SYPHLRLIL 354
+ PA VS H++VDE+HER DF++A++RD+ + HL+++L
Sbjct: 770 --------AGDPALLGVS---HVLVDEVHERTLQGDFLMALLRDLAAVRRAAGRHLKVVL 818
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
MSATLD+ F+ YFG CPV+ G T+PV+ +LED
Sbjct: 819 MSATLDSALFADYFGACPVLHAQGRTFPVEQKFLED 854
>gi|356527870|ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 1177
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 175/497 (35%), Positives = 284/497 (57%), Gaps = 18/497 (3%)
Query: 505 ENQPEVAQIIKKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICM 557
+ Q + + K + +A+ D+++ Y L+ P+ I LIE +L I
Sbjct: 496 QKQAQAFRKRKSQIASAVEDALEVAEFKGYSLRTRDSLSCWCPDSIGFNLIEHVLCHIVK 555
Query: 558 DSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPG 617
+ GA+LVF+ GW+DIN +D+L +P D S+ +I+ H + S +Q+ +F+ P G
Sbjct: 556 NERPGAVLVFMTGWDDINSLKDQLQVHPLLGDHSQVLILACHGSMASSEQRLIFENPEGG 615
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD NN L SW+SKA+A+QR GRA
Sbjct: 616 VRKIVLATNMAETSITINDVVFVVDIGKAKETSYDALNNTPCLLPSWISKAAARQRRGRA 675
Query: 678 GRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
GR Q G CYHLY + + D+Q+PE+ R P++ LCLQ+K L +I +FL + L PP
Sbjct: 676 GRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKTLQLG-SISEFLSRALQPP 734
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
++++NAI L+ IGAL +E +T LG KL L V P + KML + CLDP +T+
Sbjct: 735 EPLSVQNAIDYLKIIGALDENENLTVLGHKLAMLPVEPKLGKMLILGAIFKCLDPIMTVV 794
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF 857
RDPF +P ++K A +AK +LA+ G SD LA+I A+E W++A+ + +
Sbjct: 795 AGLSVRDPFVMP--SDKKDLAESAKAQLAA--RGYSDHLALIRAYEGWRDAEAQQAGYEY 850
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
C + F+SS + + +RKQ L G + + + + + ++ AV+ AGL+P +
Sbjct: 851 CWRNFLSSQTLRAIDSLRKQFFYLLKDIGLVNNNSETYNTWSHEEHLLRAVICAGLFPGI 910
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRN 977
+ + +K+ ++T +V L+ S+N +S P +V++E + + + +R+
Sbjct: 911 SSV--VNKDKSIALKTMEDGQVLLYSSSVNGCVS---RIPFPWLVFNEKVKVN-SVFLRD 964
Query: 978 CTVVGPLPLLLLATEIA 994
T + LLL ++
Sbjct: 965 STGISDSVLLLFGGNVS 981
Score = 229 bits (584), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 152/216 (70%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
++++E R LP KD + NQVV++SGETGCGKTTQ+PQ++LE ++G C
Sbjct: 270 QKMLEFRRSLPAFKEKDAFLRVISQNQVVVVSGETGCGKTTQLPQYILESETEAARGAVC 329
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 330 NIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLL 389
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L +++++LP P LRLILMS
Sbjct: 390 ---VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKELLPHRPDLRLILMS 435
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+A+ FS YF G P + +PGFT+PV++ +LED+L
Sbjct: 436 ATLNAELFSSYFNGAPTMHIPGFTFPVRAHFLEDIL 471
>gi|225470788|ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
vinifera]
Length = 1136
Score = 280 bits (715), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 281/504 (55%), Gaps = 22/504 (4%)
Query: 502 GEQENQPEVAQIIKKHMENALS----DSMKQQLLDKY-------LATVNPELIDLVLIEQ 550
G+++ Q++ + +N ++ D++ + + Y L+ P+ + LIE
Sbjct: 447 GQEKMWKTQKQLVPRKRKNKITALVEDALTKSSFENYSSGVRDSLSCWTPDCMGFNLIEA 506
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
+L IC GA+LVF+ GWEDI+ RD++ A+P D ++ +++ H + + +QK +
Sbjct: 507 VLCHICRKERPGAVLVFMTGWEDISCLRDQIRAHPLLGDPNRVLLLTCHGSMATSEQKLI 566
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
F++PPP RKI+L+TN+AE +ITI+DVV+V+D G+ KE +YD NN L SW+S+ASA
Sbjct: 567 FEKPPPNVRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASA 626
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFL 730
+QR GRAGR Q G CYHLY + ++Q+PE+ R P+ LCLQ+K L +I +FL
Sbjct: 627 RQRRGRAGRVQPGECYHLYPSCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVG-SIGEFL 685
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
L PP + ++NA+ L+ IGAL E +T LGE L L V P + KML + C
Sbjct: 686 SAALQPPEPLAVQNAVDFLKMIGALDEKENLTNLGEYLSMLPVDPKLGKMLIMGTIFRCF 745
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+ +DPF LP ++K A AK ++ SD +A++ A+E WK+A++
Sbjct: 746 DPILTIVAGLSVKDPFLLP--QDKKDLAGTAKSRFSA--KDYSDHMALVRAYEGWKDAER 801
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLM 910
G +C + F+S+ + + +RKQ L G + D ++ + + ++ A++
Sbjct: 802 EGSAYEYCWRNFLSAQTLQAIHSLRKQFSFILKDAGLLDADANTNNRLSHNQSLVRAIIC 861
Query: 911 AGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGD 970
+GL+P +A + P + +T +V L+ +S+N + +T P +V+ E + +
Sbjct: 862 SGLFPGIASVVP--RETSMSFKTMDDGQVLLYANSVNARY---QTIPYPWLVFGEKVKVN 916
Query: 971 GGMHVRNCTVVGPLPLLLLATEIA 994
+ +R+ T + L+L ++
Sbjct: 917 -TVFIRDSTGISDSILILFGGTLS 939
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 164/235 (69%), Gaps = 16/235 (6%)
Query: 162 AMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQV 221
++++ ++ ++ +++++ R LP K+ + + NQVV++SGETGCGKTTQ+
Sbjct: 212 SLRMRNMQRAWQESPEGKKMLDFRKSLPAFREKERLLQAIARNQVVVVSGETGCGKTTQL 271
Query: 222 PQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK 279
PQ++LE I S +G C I+CTQPRRISA SV+ER+S ERGE +G+++GYK+RLE GK
Sbjct: 272 PQYILESEIESGRGAFCSIICTQPRRISAMSVSERVSTERGEPLGESVGYKVRLEGMKGK 331
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
++ ++FCT+G+LLR L+S +++ +TH+ VDEIHER DF+L +
Sbjct: 332 NTHLLFCTSGILLRRLLSD--------------RNLNGITHVFVDEIHERGMNEDFLLIV 377
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++D+LP LRLILMSATL+A+ FS +FGG P I +PGFTYPV++ +LEDVL +
Sbjct: 378 LKDLLPRRRDLRLILMSATLNAELFSNFFGGAPTIHIPGFTYPVRAHFLEDVLEM 432
>gi|195479567|ref|XP_002100936.1| GE17334 [Drosophila yakuba]
gi|194188460|gb|EDX02044.1| GE17334 [Drosophila yakuba]
Length = 1288
Score = 280 bits (715), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 270/499 (54%), Gaps = 62/499 (12%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR-DTS 591
T+NPELI E +L+ I S D G IL+FLPG+ +I D LL N F
Sbjct: 729 TINPELI-----ESVLKYIVEGSHDWPREGTILIFLPGFGEIQTVHDSLLDNALFSPRAG 783
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
KF+++PLHS + Q VFK+ PPG RKI+LSTNIAET++TIDD V+V+D G MKEK +
Sbjct: 784 KFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCF 843
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKRIPI 710
D N+ +L WVS+A+AKQR GRAGR G+C HLY+ R Q VPEI+R+P+
Sbjct: 844 DSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYHHHILSQPVPEIQRVPL 903
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E++ L++K L + N L +TL+ P ++ A+ L+D+GAL ++++T LG L
Sbjct: 904 EQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHL 963
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ + + CLD LT+A + PF P+ N++ A K A
Sbjct: 964 AALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPL--NKRTEADKCKRMFAL- 1020
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G SD L V+ A+ W + +RG A + S++F+S + + ++ Q L+
Sbjct: 1021 --GNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSI 1078
Query: 886 GFIPEDV-----SSC-----------SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
GF+P +V ++C +HN ++ ++L A LYP + ++ P R
Sbjct: 1079 GFVPINVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTP---DRV 1135
Query: 930 FVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
+++TAGGA V++HP S+N +++ T P +V+ E R
Sbjct: 1136 YIQTAGGAVPREPSHHDLRFKTKGDGYVKIHPSSVNSQVA---TFQAPFLVFQEKVRT-S 1191
Query: 972 GMHVRNCTVVGPLPLLLLA 990
+++R+C+++ + ++L A
Sbjct: 1192 AIYIRDCSMLPLIAMVLFA 1210
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 152/230 (66%), Gaps = 23/230 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
K+ +++++ R +LP + + I + ++S+ VV+ISGETGCGK+TQVPQF+L++ + +
Sbjct: 439 KEERYQKVIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRA 498
Query: 234 ---------ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
+I+CTQPRR+SA VAER++ ER + IG +GY+IRLE+K + + +
Sbjct: 499 LQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLS 558
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S + + ++TH+IVDE+HER SDF+L I++++L
Sbjct: 559 FCTTGILLRRLASDPL--------------LESVTHVIVDEVHERSEESDFLLLILKNLL 604
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L++ILMSATL+A FS YFGG PV+ +PG T+PV+ +LED++ +
Sbjct: 605 RERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDIVEM 654
>gi|390363998|ref|XP_793172.3| PREDICTED: ATP-dependent RNA helicase DHX29-like [Strongylocentrotus
purpuratus]
Length = 1430
Score = 279 bits (713), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 175/508 (34%), Positives = 275/508 (54%), Gaps = 62/508 (12%)
Query: 535 LATVNPELIDLVLIEQLLRKI----CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDT 590
+ +NP+ I++ LI +LL + +GA+L+F+PG I + + L A+P F T
Sbjct: 872 ITRLNPDTINMDLIVELLSYLEQVPTFKCVEGAVLIFMPGLAQIQQLYEMLQADPNFSKT 931
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++ ++ LHS++ S Q F PPPG RKI+++TNIAET ITI DVV+VID+G++KE
Sbjct: 932 DRYTLLALHSVLSSDDQSAAFGIPPPGVRKIVIATNIAETGITIPDVVFVIDAGKVKENR 991
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
Y+ + +S+L+ +VSKASAKQR GRAGR + G C+ LY++ R L F PEI+R+ +
Sbjct: 992 YNERSQMSSLEEMYVSKASAKQRQGRAGRVREGFCFRLYTKQRYDVLRSFTQPEIQRVAL 1051
Query: 711 EELCLQVKLLDPNC---NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGE 766
EELCL + C N EDFLQ+ LDPP+ +R ++ +L+++GA D +T LG+
Sbjct: 1052 EELCLHIM----KCSLGNPEDFLQEALDPPLPQAVRASMSLLREVGACLADTPTLTPLGQ 1107
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L V+ + KML FA + CL+P +A A + PF +P+ ++ +A AAK +A
Sbjct: 1108 HLAALPVNVRIGKMLLFAAIFGCLEPVAVIASAMTDKPPFLVPL--GKRSQADAAKRSMA 1165
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
SD + + AF WK A+ +G+ E+ FC F++ + + +++ L +
Sbjct: 1166 V---ANSDHITIYKAFSGWKEARSKGRSAESRFCHGNFLNRTALLNMENVKRDLMQLVRS 1222
Query: 885 NGFIPEDVSSCSHNARVP-------------------------------GIIHAVLMAGL 913
GFIP ++ + +A+ P ++ +VL AG+
Sbjct: 1223 IGFIPSPTNNKAASAKQPSLSTKMEVLEISKTESLYGYKDAFPLTASNTALLKSVLTAGM 1282
Query: 914 YPMVARLR--PPHKNGR--RFVETAGGAK--VRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
YP VA+ PP + V A K V +HP S+N L TD M++ E
Sbjct: 1283 YPNVAKTTYDPPAHGMKDDEIVCRADTTKGPVTVHPSSVNRNLG---TDG--WMLFSERV 1337
Query: 968 RGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+ +++R +++ P PLLL EIAV
Sbjct: 1338 KL-SRVYIRESSLITPYPLLLFGGEIAV 1364
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 162/257 (63%), Gaps = 24/257 (9%)
Query: 145 GKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ---IVEERSKLPISSFKDVITSTV 201
+VD+ +P K + +L + +EK++N Q ++E+R LP+ +D + +
Sbjct: 561 ANKVDVKTQPNQGKGPLVTN-RTLKTILEKNSNTTQHGRLLEKRQTLPVFQHRDQVLERI 619
Query: 202 DSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCTQPRRISATSVAERISVER 259
+ +V+++GETG GK+TQ+PQFLLE + +G + IVCTQPRRISATS+A+R+S E
Sbjct: 620 YKDSIVIVAGETGSGKSTQIPQFLLEDLVLSGRGGSGSIVCTQPRRISATSLAKRVSQEL 679
Query: 260 GE---NIGDNI-GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDV 315
GE D++ GY+IRLESK + +++CT GVLLR L P+ D+
Sbjct: 680 GEPGPGHRDSLCGYQIRLESKQTSTTRLLYCTTGVLLRKL-----------QLDPSLKDI 728
Query: 316 SALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQ 375
S HII+DE+HER SDF++ I+R ++ L+LILMSATLD+ + S YF CPVI
Sbjct: 729 S---HIIIDEVHERSVQSDFLMIIVRKLVQQRSDLKLILMSATLDSQKLSAYFYHCPVIN 785
Query: 376 VPGFTYPVKSFYLEDVL 392
+PG T+PV+ ++LEDV+
Sbjct: 786 IPGRTFPVQVYHLEDVV 802
>gi|62088078|dbj|BAD92486.1| DHX57 protein variant [Homo sapiens]
Length = 733
Score = 279 bits (713), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 186/545 (34%), Positives = 298/545 (54%), Gaps = 83/545 (15%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 152 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 211
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 212 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 271
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 272 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 331
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 332 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 391
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 392 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 451
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 452 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 508
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 509 --ANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 565
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V ++R
Sbjct: 566 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVR---- 621
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLP 985
+F D P ++Y E + + +R+C++V P
Sbjct: 622 ---------------------HF--------DSPYLLYHEKIK-TSRVFIRDCSMVSVYP 651
Query: 986 LLLLA 990
L+L
Sbjct: 652 LVLFG 656
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 78/116 (67%), Gaps = 14/116 (12%)
Query: 281 SSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII 340
+ +++CT GVLLR L +G + L+ ++HIIVDE+HER SDF+L ++
Sbjct: 31 TRLLYCTTGVLLRRL--EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVL 76
Query: 341 RDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+D++ P L++ILMSATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 77 KDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 132
>gi|149050594|gb|EDM02767.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Rattus norvegicus]
Length = 913
Score = 279 bits (713), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 188/564 (33%), Positives = 309/564 (54%), Gaps = 83/564 (14%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLD---------------- 532
+LKA+ RTAL+ E E +A ++ E ++ D++ Q LD
Sbjct: 294 RLKARHNRTALE--EVEEDLRLALHLQDE-EESVKDTIPDQQLDFKQLLVRYKGVSKSVI 350
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF--RDT 590
K ++ ++ E ++L LIE LL I +D + + PG +I ++L +N F R +
Sbjct: 351 KTMSVMDFEKVNLELIEALLEWI-VDGKHS----YPPGLAEIKMLYEQLQSNSLFNNRRS 405
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK
Sbjct: 406 HRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKR 465
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIP 709
YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P
Sbjct: 466 YDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVP 525
Query: 710 IEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ DEK+T LG
Sbjct: 526 LEQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYH 585
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V + K++ + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 586 LASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF 643
Query: 828 LYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++Q TEL+ +
Sbjct: 644 ---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQF-TELLSD 699
Query: 886 -GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
GF+ E + + + NA P +I AVL A LYP V +++ P
Sbjct: 700 IGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPE 759
Query: 925 KNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDDCPLMVYDEI 966
+F +T+ G V +HP S+N+++ + D P ++Y E
Sbjct: 760 G---KFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEK 813
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 814 IK-TSRVFIRDCSMVSVYPLVLFG 836
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 144/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L++ + I
Sbjct: 71 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 130
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 131 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 188
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ L++ILMSAT
Sbjct: 189 GDATLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 236
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LDA FS+YF CPVI +PG +PV F+LED L++ +
Sbjct: 237 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTR 274
>gi|443692219|gb|ELT93867.1| hypothetical protein CAPTEDRAFT_210086 [Capitella teleta]
Length = 586
Score = 278 bits (712), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 283/555 (50%), Gaps = 86/555 (15%)
Query: 23 TVAEATRIRISQILDGFLASKDEVY-TFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQR 81
+V E +I + L+ F S+++ + F ++L++ ERA +H + +G S+S G+G R
Sbjct: 59 SVGEEVKIALDIALERFRLSEEQKHLEFPSSLTSLERAYIHSYVQGLGYKSQSRGKGSGR 118
Query: 82 RVSVCKSKKRVETDKGKEI-LPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKS 140
++V K+K+ K++ L L S+ + +P E E L + +
Sbjct: 119 YLTVYKTKQCT-----KDVDLAVLNLVRNSRCQVHAFLQRFPLSHREKQELLPRTERAQF 173
Query: 141 DKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITST 200
++ K + K + + V + S +LR + LP+ K+ I +
Sbjct: 174 NEGMSKELG-----KGATGRLNTGVAQVPSAC-GATDLRDFAQ---TLPVFKMKETIMKS 224
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERG 260
+ N V +++GETG GKTTQVPQ +L+ +TC+I CTQPRR++A +VAER++ ERG
Sbjct: 225 LHENHVFMVAGETGSGKTTQVPQMILDDCHDNSKTCRIFCTQPRRLAALTVAERVAAERG 284
Query: 261 ENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTH 320
EN+G +GY+IRLES+ + + FCTNGVLLR L+S + + +S +TH
Sbjct: 285 ENVGQTVGYQIRLESRVSPKTILTFCTNGVLLRTLMS-------------SSNALSTVTH 331
Query: 321 IIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFT 380
IIVDEIHERDR+SDF+L +RD+LP + +LRLILMSA L+ FS +F GCPV+ VPG
Sbjct: 332 IIVDEIHERDRFSDFLLIALRDLLPKFRNLRLILMSAALNVQLFSAFFSGCPVVHVPGKL 391
Query: 381 YPVKSFYLEDVLSI--------LKSAES--------NHLDSASLI--VPNED-------- 414
+ V+ F+LEDVL + LK ES +L++ L +P ED
Sbjct: 392 FDVEEFFLEDVLKLTKYTTPQMLKYTESVDDVENKVKNLNAWCLESGMPGEDVIEEGKGE 451
Query: 415 --------------PELTEENKS----------------TLDEAISLAWSNDEFDMLLEL 444
E E+ KS LD + AW + D L +L
Sbjct: 452 EDDDDEGSEEVTPTDEAAEQEKSFECVEECEDLNISVMQHLDSHLQAAWLTGQEDCLFDL 511
Query: 445 VSLEGSPNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGE 503
+ L NV +Y H+ T T LM+ AG+G V V LL LGA+ A + TA
Sbjct: 512 LKLMVKENVSVDYGHSETSATALMIAAGRGHVKVVEQLLQLGANVNHHASNEWTAFDWAR 571
Query: 504 QENQPEVAQIIKKHM 518
+ + ++ +I++ H+
Sbjct: 572 RFQRTDILEILEAHV 586
>gi|356523499|ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 1161
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 282/502 (56%), Gaps = 18/502 (3%)
Query: 496 RTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKI 555
+T QL ++ + ++ +++ + N+ ++ + D L + P+ I LIE +L I
Sbjct: 478 KTQKQLAPRKRKNQITALVEDALSNSSFENYSSRARDS-LTSWAPDCIGFNLIEAVLCHI 536
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
C GA+LVF+ GWEDI+ +D+L A+P D ++ +++ H + + +QK +F++PP
Sbjct: 537 CRKERPGAVLVFMTGWEDISSLKDQLKAHPLVGDPNRVLLLTCHGSMATSEQKLIFEKPP 596
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAG 675
P RK+IL+TN+AE +ITI+D+V+V+D G+ KE +YD NN L SW+S+ASA+QR G
Sbjct: 597 PNIRKVILATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRG 656
Query: 676 RAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLD 735
RAGR Q G CYHLY + + ++Q+PE+ R P+ LCLQ+K L +I FL L
Sbjct: 657 RAGRVQPGECYHLYPKCVYDAFSEYQLPELLRTPLNSLCLQIKSLQVE-SIGGFLSAALQ 715
Query: 736 PPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALT 795
P ++NAI L+ IGAL E +T LG+ L L V P + KML + C DP LT
Sbjct: 716 APEPRAVQNAIDFLKMIGALDEQENLTNLGKFLSMLPVDPKLGKMLIMGAIFRCFDPVLT 775
Query: 796 LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
+ RDPF LP +++ A AK ++ SD +A++ A+E WK+A++ G
Sbjct: 776 IVAGLSVRDPFLLP--QDKRDLAGTAKSRFSA--KDYSDHMALVRAYEGWKDAEREGSAY 831
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED---VSSCSHNARVPGIIHAVLMAG 912
+C + F+S+ + + +RKQ L + G + + ++ SHN ++ AV+ +G
Sbjct: 832 EYCWRNFLSAQTLQAIHSLRKQFSFILKEAGLVDAEANVINKLSHNQ---SLVRAVICSG 888
Query: 913 LYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
L+P +A + H+ +T +V L+ +S+N + +T P +V+ E + +
Sbjct: 889 LFPGIASV--VHRETSMSFKTMDDGQVLLYANSVNARY---QTIPYPWLVFGEKVKVN-A 942
Query: 973 MHVRNCTVVGPLPLLLLATEIA 994
+ +R+ T V L+L ++
Sbjct: 943 VFIRDSTGVSDSILILFGGALS 964
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 222/390 (56%), Gaps = 28/390 (7%)
Query: 16 QQQQQSPTVA--EATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSK 73
+ QQ S TVA + + ++S +L + KD+ R+ + + K+MG+ S+
Sbjct: 85 ENQQASSTVANVDEWKWKLSMLLR---SEKDQEIVSRDRKDRRDYEQIANLAKRMGLYSE 141
Query: 74 SSGRGK-QRRVSVCKSKKRVETDK-GKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEK 131
G+ +V + + ++ + +E++ L+ + +LQ+ + + +
Sbjct: 142 LFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYLDRLQLNSAKTTDS 201
Query: 132 LDANQSRKS--DKTRGKRVDIFCKPKMSKAEI---AMKVESLTSRIEKDANLRQIVEERS 186
LD S D + D F + + + ++++ ++ ++ R+++E R
Sbjct: 202 LDDVNSTNQVKDINMDENADSFVDESVMEKVLQKRSLRMRNMQRAWQESPEGRKLLEFRK 261
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETCKIVCTQPR 244
LP K + + NQV++ISGETGCGKTTQ+P ++LE + S +G C I+CTQPR
Sbjct: 262 SLPSFKEKQGLLQAIAHNQVIVISGETGCGKTTQLPHYVLESEVESGRGAFCSIICTQPR 321
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
RISA +VAER+S ERGE +G+ +G+K+RLE GK++ ++FCT+G+LLR L+S
Sbjct: 322 RISAMAVAERVSAERGEPLGETVGFKVRLEGMKGKNTHLLFCTSGILLRRLLSD------ 375
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
+++ +TH+ VDEIHER DF+L +++D+LP LRL+LMSATL+A+ F
Sbjct: 376 --------RNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELF 427
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
S YFGG P +PGFTYPV++ +LED+L +
Sbjct: 428 SNYFGGAPTFHIPGFTYPVRAHFLEDILEM 457
>gi|194889931|ref|XP_001977192.1| GG18891 [Drosophila erecta]
gi|190648841|gb|EDV46119.1| GG18891 [Drosophila erecta]
Length = 1288
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 271/499 (54%), Gaps = 62/499 (12%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR-DTS 591
T+NPELI E +L+ I S D G IL+FLPG+ +I D LL N F
Sbjct: 729 TINPELI-----ESVLKYIVDGSHDWPREGTILIFLPGFGEIQTVHDSLLDNALFSPRAG 783
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
KF+++PLHS + S Q VFK+ PPG RKI+LSTNIAET++TIDD V+V+D G MKEK +
Sbjct: 784 KFILVPLHSALSSEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCF 843
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKRIPI 710
D N+ +L WVS+A+AKQR GRAGR G+C HLY+ R Q VPEI+R+P+
Sbjct: 844 DSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYNHHILAQPVPEIQRVPL 903
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E++ L++K L + N L +TL+ P +I A+ L+D+GAL ++++T LG L
Sbjct: 904 EQIVLRMKTLQTFASRNTLSVLLETLEAPTEDSILGALARLRDVGALDAEDQLTPLGHHL 963
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ + + CLD LT+A + PF P+ N++ A K A
Sbjct: 964 AALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPL--NKRTEADKCKRMFAL- 1020
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G+SD L V+ A+ W + +RG A + S++F+S + + ++ Q L+
Sbjct: 1021 --GKSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADIKYQYLELLVSI 1078
Query: 886 GFIPEDV-----SSCSHNARVPGI-----------IHAVLMAGLYPMVARLRPPHKNGRR 929
GF+P DV ++C + + G+ + ++L A LYP + ++ P R
Sbjct: 1079 GFVPIDVPRRRKNACDNILTLTGVEQNQNGDNNMLLTSLLCAALYPNIVKIMTP---DRV 1135
Query: 930 FVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
+++TAGGA V++HP S+N +++ P +V+ E R
Sbjct: 1136 YIQTAGGAVPREPSHHDLRFKTRGDGYVKIHPSSVNSQVAVFPA---PFLVFQEKVR-TS 1191
Query: 972 GMHVRNCTVVGPLPLLLLA 990
+++R+C+++ + ++L A
Sbjct: 1192 AIYIRDCSMLPLIAMVLFA 1210
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 152/230 (66%), Gaps = 23/230 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
K+ + ++I++ R +LP + + I + ++S VV+ISGETGCGK+TQVPQF+L++ + +
Sbjct: 439 KEESYQKIIDGRKQLPAFAEIERILAQIESAPVVVISGETGCGKSTQVPQFILDNWFFRA 498
Query: 234 ---------ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
+I+CTQPRR+SA VAER++ ER + IG +GY+IRLE+K + + +
Sbjct: 499 LQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLS 558
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S + + ++TH+IVDE+HER SDF+L I++++L
Sbjct: 559 FCTTGILLRRLASDPL--------------LGSVTHVIVDEVHERSEESDFLLLILKNLL 604
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L++ILMSATL+A FS YFGG PV+ +PG T+PV+ +LED+L +
Sbjct: 605 RERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQVFLEDILEM 654
>gi|444725110|gb|ELW65689.1| ATP-dependent RNA helicase DHX29 [Tupaia chinensis]
Length = 1404
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/482 (37%), Positives = 258/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 890 MNPHKINLDLILELLTYLDTSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 948
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 949 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 1008
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 1009 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1068
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1069 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1124
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1125 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1179
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1180 MADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1239
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F SS R ++ AVL AGLY V ++ + VET
Sbjct: 1240 FSSSTTSSIWEGNRASQTLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACVVET 1299
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1300 AQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1352
Query: 994 AV 995
V
Sbjct: 1353 EV 1354
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 599 VRNLFRKLQSTPKYQRLLKERQELPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 658
Query: 225 LLE----HIWSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE H W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 659 LLEDLLLHEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMES 717
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HER SDF
Sbjct: 718 RASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHERSVQSDF 763
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 764 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 820
>gi|297852484|ref|XP_002894123.1| helicase domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297339965|gb|EFH70382.1| helicase domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1197
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 264/463 (57%), Gaps = 18/463 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ +P+ I LIE +L I GA+LVF+ GW+DIN +++L A+ D +K +
Sbjct: 552 LSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVL 611
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G+ KE SYD
Sbjct: 612 LLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDAL 671
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SKA+A+QR GRAGR G CYHLY + + D+Q PE+ R P++ LC
Sbjct: 672 NNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYDAFADYQQPELLRTPLQSLC 731
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L PP +++++NA+ L+ IGAL DE +T LG+ L L V
Sbjct: 732 LQIKSLGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTALGKNLSMLPVE 790
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP +T+ RDPF +P + +KF SD
Sbjct: 791 PKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDY----SD 846
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
L ++ A+ WK+A++ +C + F+SS + + MRKQ L+K + +++
Sbjct: 847 HLTLVRAYSGWKDAERTHSGYEYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNIEG 905
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF---KLS 951
CS + ++ A++ AGL+P + + +K ++T +V L+ S+N ++
Sbjct: 906 CSKLSHDEHLVRAIICAGLFPGICSV--VNKEKSITLKTMEDGQVLLYSSSVNGNVPRIP 963
Query: 952 FKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
F P +V+++ + + + +R+ T V LLL +I+
Sbjct: 964 F------PWLVFNDKVKVN-SVFLRDSTAVSDSVLLLFGDKIS 999
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 154/216 (71%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+++VE R LP KD + + +NQVV++SGETGCGKTTQ+PQ++LE ++G +C
Sbjct: 290 QKMVEFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGASC 349
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE IGD++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQIGDSVGYKVRLEGMTGRDTRLLFCTTGVLLRRLL 409
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R + +TH++VDEIHER DF+L +++D+LP P L+LILMS
Sbjct: 410 ---VDR-----------SLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMS 455
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+A+ FS YFGG P + +PGFTYPV++ +LED L
Sbjct: 456 ATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYL 491
>gi|148706571|gb|EDL38518.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Mus musculus]
Length = 1097
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 188/569 (33%), Positives = 307/569 (53%), Gaps = 93/569 (16%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHM-----ENALSDSMKQQLLD----------- 532
+LKA+ RTA Q EV + ++ + E ++ D++ Q LD
Sbjct: 478 KLKARHNRTA--------QEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGV 529
Query: 533 -----KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF 587
K ++ ++ E ++L LIE LL I DG + PG +I ++L +N F
Sbjct: 530 SKSVIKTMSVMDFEKVNLELIEALLEWIV----DGK-HAYPPGLAEIKMLYEQLQSNSLF 584
Query: 588 --RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+
Sbjct: 585 NNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGK 644
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPE 704
MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PE
Sbjct: 645 MKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPE 704
Query: 705 IKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
I+R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ DEK+T
Sbjct: 705 IQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLT 764
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
LG L L V + K++ + CLDPALT+A + ++ PF P ++K+ A K
Sbjct: 765 PLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKK 822
Query: 823 FELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQT 880
E A SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++Q T
Sbjct: 823 LEFAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQF-T 878
Query: 881 ELIKN-GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVAR 919
EL+ + GF+ E + + + NA P +I AVL A LYP V +
Sbjct: 879 ELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNVVQ 938
Query: 920 LRPPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDDCPLM 961
++ P +F +T+ G V +HP S+N+++ + D P +
Sbjct: 939 VKTPEG---KFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYL 992
Query: 962 VYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+Y E + + +R+C++V PL+L
Sbjct: 993 LYHEKIK-TSRVFIRDCSMVSVYPLVLFG 1020
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 144/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L++ + I
Sbjct: 255 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 314
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 315 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 372
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ L++ILMSAT
Sbjct: 373 GDATLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 420
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LDA FS+YF CPVI +PG +PV F+LED L++ +
Sbjct: 421 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTR 458
>gi|167535408|ref|XP_001749378.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772244|gb|EDQ85899.1| predicted protein [Monosiga brevicollis MX1]
Length = 1016
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 229/785 (29%), Positives = 356/785 (45%), Gaps = 189/785 (24%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+ + R LP + ++ I + +DSNQV+L+SGETG GKTTQVPQF+LE + C IVC
Sbjct: 157 LAQFRQTLPAFAMREQILAAIDSNQVLLLSGETGSGKTTQVPQFVLEAAVERNTPCCIVC 216
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
+QPRRISA SVA+R++ E G +GD +GY IRL+S+ H+ ++FCT G+LLR+ +S
Sbjct: 217 SQPRRISAMSVAKRVATEWGSRVGDTVGYNIRLDSQVSAHTKLMFCTTGLLLRIAMS--- 273
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
D+ +TH+IVDE+HERDR+SDF+L +R +L P ++LI+MSATL
Sbjct: 274 -----------DPDLGHVTHVIVDEVHERDRFSDFLLISLRQLLARRPDVKLIIMSATLH 322
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
++ F++ ++ GF +S DSA L
Sbjct: 323 SELFTE------ALKSIGFRGH-------------QSHRKQQADSAQL----------RS 353
Query: 421 NKSTLDEAISLAW------SNDEFDMLL--ELVSLEGSPNVYNYQHTLTGLTPLMVLAGK 472
+ + +++ + AW S + + M + ELV+ +G +++H T LT LM+ A K
Sbjct: 354 SLALIEQGMGQAWHAEVGLSTESYLMNIYHELVA-DGID--VDHRHPQTDLTTLMIAAAK 410
Query: 473 GRVGDVCMLLSLGADCQLKAK-DGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLL 531
G V LL L AD + +G TA V I++ + + D M+ +++
Sbjct: 411 GADEWVDRLLRLDADAGATCRHNGWTAADFAAYFGHHNVLNILQTFLSDD-EDGMQSEVI 469
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
D+ + E+ + + S D + D
Sbjct: 470 -----------ADMTVDERAMVQAYQASFDDS-------------------------DVD 493
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+I+ L + + + P G I++ + ETA+TIDDVVYVIDSG++KE
Sbjct: 494 IELIVQLVA--------HIMQHWPAGEGAILIF--LPETAVTIDDVVYVIDSGKLKET-- 541
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
V A + + Y +L FQ E+ R+ ++
Sbjct: 542 -------------VRLLPIPVYGSHCDPPAATVNHQRYR-----NLAHFQKAELLRVSLD 583
Query: 712 ELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
+LCLQ DFL+ + P I +AI +LQ I L +E VT LG +L L
Sbjct: 584 DLCLQ-----------DFLELAPEAPDPKAIDSAIDLLQQIAVLDPEENVTNLGYRLSNL 632
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEK----------KRATAA 821
S+ P ++M+ A ++ LDP LTL C DYR PF LP+ P + ++A A
Sbjct: 633 SLSPPSARMVLLAYVLGVLDPILTLVCCGDYRSPFALPMQPQARLARLMCPLGVEQAAAK 692
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTE 881
+ + +SD LA+I ++ ++ K + G R Q Q
Sbjct: 693 RMHMQWGLEFESDHLALIKVYDEYRRQK--------------------TMFGNRNQTQR- 731
Query: 882 LIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRL 941
G+I A L AGLYP +AR P N + + T ++V++
Sbjct: 732 ---------------------GVIKAALCAGLYPNIARRNP---NAKSY-STRSESRVKV 766
Query: 942 HPHSL 946
H S+
Sbjct: 767 HTGSM 771
>gi|410903590|ref|XP_003965276.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase Dhx29-like
[Takifugu rubripes]
Length = 1325
Score = 277 bits (709), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 176/482 (36%), Positives = 266/482 (55%), Gaps = 37/482 (7%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L +NP I++ L+ +L+ I + DGA+LVFLPG I + D L ++ FRD
Sbjct: 794 LQFMNPNKINMDLLVELIAYIEKSPQFAEVDGAVLVFLPGLAHIQQLYDLLCSDKRFRDK 853
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++F I+ LHS + S Q F PP G RKI+LSTNIAET +TI DVV+VID+G+ KE
Sbjct: 854 NRFRIVALHSTLSSKDQAAAFTVPPAGVRKIVLSTNIAETGVTIPDVVFVIDTGKTKENK 913
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
Y + +S+L ++VSKASA QR GRAGR + G C+ LY + R + D+ +PEI R+P+
Sbjct: 914 YHESSQMSSLVETFVSKASALQRQGRAGRVRNGFCFRLYPKFRFDAFMDYSIPEILRVPL 973
Query: 711 EELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV-TELGE 766
EELCL + C EDFL + LDPP ++ NA+ +L+ IGA E + T LG
Sbjct: 974 EELCLHIM----KCQYGSPEDFLSRALDPPQPQSVSNAVNLLRKIGACHPSEHILTPLGH 1029
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L V+ + KML + ++ CL+P T+A A + PF+ P+ N K+ A AK A
Sbjct: 1030 HLASLPVNVKIGKMLIYGAILGCLEPIATIAAAITEKSPFSTPM--NRKEEANLAK---A 1084
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
+L SD L + +A+ WK A+ GQ A +C ++F++ + + ++++L + +
Sbjct: 1085 ALSLANSDHLTIYSAYLGWKKAQAEGQRADLSYCRKHFLNRTALITIEDVKRELIKMMEQ 1144
Query: 885 NGFIPEDVSS------CSHNARVPGIIHAVLMAGLYPMVARL--RPPHKNGRRFV---ET 933
GF SS S + + ++ AVL AGLY V R+ P R V ET
Sbjct: 1145 VGFWSCRSSSGVKSQPASLSKQQIAVLKAVLTAGLYDSVGRILCTPSVDVLERVVCVAET 1204
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
G + ++HP S+N L ++Y E + +++R+ T++ P P+LL +I
Sbjct: 1205 PQG-RAQVHPSSVNRNLQTHG-----WLLYQEKVKY-AKIYLRDTTLIPPFPMLLFGGDI 1257
Query: 994 AV 995
V
Sbjct: 1258 DV 1259
Score = 186 bits (471), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 145/233 (62%), Gaps = 22/233 (9%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L +++K +++ ER +LP+ + I + + VV+++GETG GK+TQ+PQFLLE
Sbjct: 509 LFKKLKKSPLAQKLQAEREQLPVFQNRHRILEALQRHSVVVVAGETGSGKSTQIPQFLLE 568
Query: 228 HIWSKG---ETCKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGK 279
+ + G + C IV TQPRRISA S+A R+S E G + G GY+IR+E+ G
Sbjct: 569 ELLTGGREAQPCNIVVTQPRRISAMSLACRVSQELGCDDGPGSKSSLCGYQIRMENLSGD 628
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
+ +++CT GVLLR L +S+LTHIIVDE+HER SDF+L I
Sbjct: 629 WTRLLYCTTGVLLRKLQHD--------------RHLSSLTHIIVDEVHERSVQSDFLLTI 674
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
++D++ LRLILMSAT+D +FS YF CPVI +PG T+PV+ +LED++
Sbjct: 675 LKDVVMRRSDLRLILMSATVDCHKFSNYFNRCPVITIPGRTFPVEVSHLEDIV 727
>gi|12597813|gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thaliana]
Length = 1167
Score = 277 bits (709), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 262/460 (56%), Gaps = 12/460 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ +P+ I LIE +L I GA+LVF+ GW+DIN +++L A+ D +K +
Sbjct: 522 LSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVL 581
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G+ KE SYD
Sbjct: 582 LLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDAL 641
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SKA+A+QR GRAGR G CYHLY + + D+Q PE+ R P++ LC
Sbjct: 642 NNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLC 701
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L PP +++++NA+ L+ IGAL DE +T LG+ L L V
Sbjct: 702 LQIKSLGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVE 760
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP +T+ RDPF +P + +KF SD
Sbjct: 761 PKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDY----SD 816
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
L ++ A+ WK+A++ +C + F+SS + + MRKQ L+K + +++
Sbjct: 817 HLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNIEG 875
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
CS + ++ A++ AG++P V + +K ++T +V L+ S+N +
Sbjct: 876 CSKLSHDEHLVRAIICAGMFPGVCSV--VNKEKSITLKTMEDGQVLLYSSSVNGNVPMIP 933
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V+++ + + + +R+ T V LLL +I+
Sbjct: 934 ---FPWLVFNDKVKVN-SVFLRDSTAVSDSVLLLFGDKIS 969
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 153/216 (70%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+++V R LP KD + + +NQVV++SGETGCGKTTQ+PQ++LE ++G TC
Sbjct: 260 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 319
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 320 SIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL 379
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R + +TH++VDEIHER DF+L +++D+LP P L+LILMS
Sbjct: 380 ---VDR-----------SLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMS 425
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+A+ FS YFGG P + +PGFTYPV++ +LED L
Sbjct: 426 ATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYL 461
>gi|414587185|tpg|DAA37756.1| TPA: hypothetical protein ZEAMMB73_165571 [Zea mays]
Length = 1380
Score = 277 bits (709), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 184/523 (35%), Positives = 280/523 (53%), Gaps = 76/523 (14%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
++ L +N ++ID L+E L+ I + GAILVFLPG +I+ DRL A F S
Sbjct: 847 NQNLKRLNEDVIDFDLLEDLICYIDENCPQGAILVFLPGVAEIDLLIDRLSALVRFGGAS 906
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
I+PLHS++ Q+KVF+ PP RK+I++T+IAET+ITIDDVVYV+D+G+ KE Y
Sbjct: 907 SDWILPLHSLLGPSDQRKVFQSPPDNFRKVIIATDIAETSITIDDVVYVVDTGKHKENRY 966
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPI 710
+P+ +S++ W+S+A+AKQR GRAGR + G+C+ LY++ R + + FQVPE+ R+P+
Sbjct: 967 NPHKKMSSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFENVMRPFQVPEMLRMPL 1026
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
ELCLQ+K L + +I+ FL K ++PP I +A+ +L +GA E+++ LG L
Sbjct: 1027 TELCLQIKSLHLD-DIKSFLLKAVEPPNEEAISSAVDLLYKVGAFEGHEELSPLGYHLAK 1085
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL--ASL 828
L V L+ KM+ + + CL P L++A Y+ PF P +EK+ AK L +L
Sbjct: 1086 LPVDVLIGKMMLYGAIFGCLSPILSVAAFLSYKSPFLSP--KDEKQNVEKAKATLLNENL 1143
Query: 829 YGG-------QSDQLAVIAAFECW-----KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
G QSD L ++ A++ W +N + ++ FC ++++S VM+M+ MR
Sbjct: 1144 DGSSSVTDNKQSDHLLMVIAYDKWSRILLQNGDKSARQ--FCHSFYLNSTVMHMIRDMRL 1201
Query: 877 QLQTELIKNGFI--PED-----VSSCSHN---------------ARVPGIIHAVLMAGLY 914
Q T L G I P+D V S +N AR +I +V+ AGLY
Sbjct: 1202 QFGTLLADIGLIDLPKDTLRHKVGSRKNNLESWFSNMSLPFNAYARCTSVIKSVMCAGLY 1261
Query: 915 PMVA----------------------RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSF 952
P VA + RP +GRR +V +HP S+N L
Sbjct: 1262 PNVAASLEGVDPGALGGRKPSDVLFSKDRPRWYDGRR--------EVHIHPSSVNHSL-- 1311
Query: 953 KKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
K P +V+ E + +R+ +VV P LLL + +
Sbjct: 1312 -KAVQYPFLVFLEKVE-TTKVFLRDTSVVSPYSLLLFGGSMVI 1352
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 166/271 (61%), Gaps = 26/271 (9%)
Query: 132 LDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPIS 191
+D+ + S KR +AE A+ + L + K N +++E R+ LPI+
Sbjct: 517 MDSGNTEGSKSVNEKRQTTMTSCMAERAESAILKKQLEDK-RKLPNYLKMLEARASLPIA 575
Query: 192 SFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISAT 249
+ + N VV++SGETGCGKTTQVPQF+L+ + G +C IVCTQPRRI+A
Sbjct: 576 RQRQHFLQLLKENDVVVVSGETGCGKTTQVPQFILDDMIESELGGSCNIVCTQPRRIAAI 635
Query: 250 SVAERISVERGE-NIGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKE 305
SVAER+S ER E + G N +GY++RL+S + + ++FCT G+LLR L
Sbjct: 636 SVAERVSDERCEPSPGSNDSLVGYQVRLDSARNERTKLLFCTTGILLRKL---------- 685
Query: 306 ASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-----LRLILMSATLD 360
+ N+ D+S +TH++VDE+HER SDF+L ++++++ + L++ILMSAT+D
Sbjct: 686 SGNR----DLSDVTHVVVDEVHERTILSDFLLIVLKNLVEKRSNQQGRKLKVILMSATVD 741
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+ F++YFG CPVI V G T+PV + +LEDV
Sbjct: 742 SSLFARYFGECPVISVEGRTHPVSTHFLEDV 772
>gi|449457087|ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Cucumis sativus]
Length = 1642
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 195/515 (37%), Positives = 275/515 (53%), Gaps = 55/515 (10%)
Query: 529 QLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFR 588
+L K L +N +ID L+E L+ + ++GAILVFLPG +I+ DRL A+ F
Sbjct: 1066 ELTQKNLERLNEHIIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFG 1125
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
+ I+PLHS + S QKKVF RPP G RK+I++TNIAET+ITIDDVVYVIDSGR KE
Sbjct: 1126 GQASDWILPLHSSIASTDQKKVFLRPPYGIRKVIIATNIAETSITIDDVVYVIDSGRHKE 1185
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD-FQVPEIKR 707
Y+P +S++ W+S+A+A+QR GRAGR + G C+ LY+ R L FQVPE+ R
Sbjct: 1186 NRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGTCFCLYTHHRYEKLMRPFQVPEMLR 1245
Query: 708 IPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+P+ ELCLQ+KLL I FL K L+PP + +AI +L ++GAL +E++T LG+
Sbjct: 1246 MPLVELCLQIKLLSLGY-IRPFLSKALEPPREEAMASAISLLYEVGALEGNEELTPLGQH 1304
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V L+ KM+ + + CL L+++ Y+ PF P +EK+ AK L S
Sbjct: 1305 LAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYP--KDEKQNVERAKSALLS 1362
Query: 828 LYGG----------QSDQLAVIAAFECW-KNAKQRGQEA--WFCSQYFVSSGVMNMLLGM 874
G QSD L ++ A++ W K Q+G +A FC +F+SS VM M+ M
Sbjct: 1363 DEGNGSGESCGNDKQSDHLIMVNAYKKWEKILHQKGAKAAQQFCKSHFLSSSVMYMIRDM 1422
Query: 875 RKQLQTELIKNGFIPEDVSSC--------------------SHNARVPGIIHAVLMAGLY 914
R Q T L G + + SC + + P I+ AVL AGLY
Sbjct: 1423 RVQFGTLLADIGLVDLPIRSCFGRTTKEDLDSWFSDSSQPFNMYSDHPSIVKAVLCAGLY 1482
Query: 915 PMVARLRPP------HKNGRRF--------VETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
P +A + GR F V G +V +HP S+N L K P
Sbjct: 1483 PNIAAGEEGITEAALNSLGRSFGPATTARPVLYDGRREVYIHPSSVNSNL---KAFQYPF 1539
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
V+ E + + +R+ +VV P +LL I +
Sbjct: 1540 HVFLEKVETN-KVFIRDTSVVSPYSILLFGGSINI 1573
Score = 182 bits (463), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 151/242 (62%), Gaps = 30/242 (12%)
Query: 166 ESLTSRIEKDANLR-----QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQ 220
ES R+E + +R ++++ R+ LPI+S + + + N V+++ G+TG GKTTQ
Sbjct: 771 ESSRLRLEHENKMRTKKYQEMLKNRAALPIASLRGDMLRLLKENNVLVVCGDTGSGKTTQ 830
Query: 221 VPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGE----NIGDNIGYKIRLE 274
VPQF+L+ + G C IVCTQPRRI+A SVAER+S ER E + G +GY +RL+
Sbjct: 831 VPQFILDEMIESGCGGLCNIVCTQPRRIAAISVAERVSDERCEPAPGSNGSLVGYHVRLD 890
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+ +++ ++FCT G+LLR +V + ++ +THIIVDE+HER D
Sbjct: 891 NARNENTKLLFCTTGILLRKIV--------------GDETLTGITHIIVDEVHERSLLGD 936
Query: 335 FMLAIIRDMLP-----SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
F+L ++++++ S L+++LMSAT+D++ FS YFG CPVI G +PV +++LE
Sbjct: 937 FLLVVLKNLIEKRSVESSSPLKVVLMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLE 996
Query: 390 DV 391
D+
Sbjct: 997 DI 998
>gi|30694379|ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
gi|332194212|gb|AEE32333.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
Length = 1197
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 262/460 (56%), Gaps = 12/460 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ +P+ I LIE +L I GA+LVF+ GW+DIN +++L A+ D +K +
Sbjct: 552 LSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVL 611
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G+ KE SYD
Sbjct: 612 LLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDAL 671
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SKA+A+QR GRAGR G CYHLY + + D+Q PE+ R P++ LC
Sbjct: 672 NNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLC 731
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L PP +++++NA+ L+ IGAL DE +T LG+ L L V
Sbjct: 732 LQIKSLGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVE 790
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP +T+ RDPF +P + +KF SD
Sbjct: 791 PKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDY----SD 846
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
L ++ A+ WK+A++ +C + F+SS + + MRKQ L+K + +++
Sbjct: 847 HLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNIEG 905
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
CS + ++ A++ AG++P V + +K ++T +V L+ S+N +
Sbjct: 906 CSKLSHDEHLVRAIICAGMFPGVCSV--VNKEKSITLKTMEDGQVLLYSSSVNGNVPMIP 963
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V+++ + + + +R+ T V LLL +I+
Sbjct: 964 ---FPWLVFNDKVKVN-SVFLRDSTAVSDSVLLLFGDKIS 999
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 153/216 (70%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+++V R LP KD + + +NQVV++SGETGCGKTTQ+PQ++LE ++G TC
Sbjct: 290 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 349
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL 409
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R + +TH++VDEIHER DF+L +++D+LP P L+LILMS
Sbjct: 410 ---VDR-----------SLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMS 455
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+A+ FS YFGG P + +PGFTYPV++ +LED L
Sbjct: 456 ATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYL 491
>gi|255576211|ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1509
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 193/540 (35%), Positives = 289/540 (53%), Gaps = 72/540 (13%)
Query: 512 QIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGW 571
+II H ++ S +Q K L ++ ++ID L+E L+ + +GAILVFLPG
Sbjct: 865 EIINPHFVSSNYQSYSEQT-QKNLKRLDEDIIDYDLLEDLIFHVDQTYGEGAILVFLPGM 923
Query: 572 EDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETA 631
+I+ DRL+A+ F S ++PLHS + S QKKVF RPP RK+I++TNIAET+
Sbjct: 924 SEIHMLLDRLVASYRFGGPSSNWVLPLHSSIASTDQKKVFLRPPENIRKVIIATNIAETS 983
Query: 632 ITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ 691
ITIDDVVYVID G+ KE Y+P ++++ W+S+A+A+QR GRAGR + GIC+ LY+
Sbjct: 984 ITIDDVVYVIDCGKHKENRYNPQKKLTSMVEDWISQANARQRRGRAGRVKPGICFCLYTC 1043
Query: 692 LRAASL-PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
R L +QVPE+ R+P+ ELCLQ+K+L +I+ FL K L+PP + +AI +L
Sbjct: 1044 HRFKKLMRPYQVPEMLRMPLVELCLQIKILSLG-HIKPFLSKALEPPRDEAMTSAISLLY 1102
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPI 810
++GA+ DE++T LG L L V L+ KM+ + + CL P L+++ Y+ PF P
Sbjct: 1103 EVGAIEGDEELTPLGHHLAKLPVDLLIGKMMLYGAIFGCLSPILSISAFLSYKSPFMYP- 1161
Query: 811 SPNEKKRATAAKFELAS--------LYGG--QSDQLAVIAAFECWKNA-KQRGQEA--WF 857
+EK+ AK L + L G QSD + ++ A++ W N ++G +A F
Sbjct: 1162 -KDEKQNVERAKLALLTDKVDGSNDLNHGDRQSDHIIMMVAYKKWDNILHEKGVKAAQQF 1220
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFI--PEDVSSCSHN----------------- 898
CS YF+S+ VM+M+ MR Q T L GFI P++ N
Sbjct: 1221 CSTYFLSNSVMHMIRDMRIQFGTLLADIGFINLPQNYQILGRNKEKFDGWLSDKSQPFNT 1280
Query: 899 -ARVPGIIHAVLMAGLYPMVARLR----------------------PPHKNGRRFVETAG 935
+ I+ A+L AGLYP VA + P +GRR
Sbjct: 1281 YSHHSSIVKAILCAGLYPNVAATQQGIIATAINSLKQSTIPAIKGYPVWYDGRR------ 1334
Query: 936 GAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+V +HP S+N K+ K P +V+ E + + +R+ T++ P +LL I V
Sbjct: 1335 --EVHIHPSSINSKV---KAFQHPFLVFLEKVETN-KVFLRDTTIISPFSILLFGGFINV 1388
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 145/233 (62%), Gaps = 28/233 (12%)
Query: 173 EKDANL---RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
EK N+ R+I++ R LPI+ K+ I + N +++ GETG GKTTQVPQF+L+ +
Sbjct: 595 EKKKNVLKYREILKTRGALPIAGLKNEILQMLKENNCLVVCGETGSGKTTQVPQFILDDM 654
Query: 230 W--SKGETCKIVCTQPRRISATSVAERISVERGE----NIGDNIGYKIRLESKGGKHSSI 283
+G C I+CTQPRRI+A SVAER++ ER E + G +GY++RL+S + + +
Sbjct: 655 IESGRGGQCNIICTQPRRIAAISVAERVAYERYEPPPGSGGSLVGYQVRLDSARNERTKL 714
Query: 284 VFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM 343
+FCT G+LLR L ++S +TH+IVDE+HER DF+L +++ +
Sbjct: 715 LFCTTGILLRRLA--------------GDRNLSGITHVIVDEVHERSLLGDFLLIVLKSL 760
Query: 344 LP-----SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
L P L++ILMSAT+D+ FS YFG CPV+ G T+PV +++LED+
Sbjct: 761 LEKQSDQGTPKLKVILMSATVDSTLFSNYFGHCPVLSAQGRTHPVTTYFLEDI 813
>gi|255558801|ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540409|gb|EEF41979.1| ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1058
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 280/500 (56%), Gaps = 24/500 (4%)
Query: 505 ENQPEVAQIIKKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICM 557
+ Q + + K + +A+ D+++ Y L++ NP+ I LIE++L I
Sbjct: 416 QKQAQAFRKRKTQIASAVEDALEAANFKGYSLRTQESLSSWNPDSIGFNLIERVLCHIVK 475
Query: 558 DSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPG 617
GA+LVF+ GW+DI+ +D+L +P D S+ +++ H + S +Q+ +F +P G
Sbjct: 476 KERPGAVLVFMTGWDDISSLKDQLQTHPVLGDPSRILLLACHGSMDSSEQRLIFDKPKDG 535
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
KI+L+TN+AET+ITI D V+V+D G+ KE SYD NN L SW+SKA+A+QR GRA
Sbjct: 536 VHKIVLATNMAETSITIPDAVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRA 595
Query: 678 GRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
GR Q G CYHLY + + D+Q+PE+ R P++ LCLQ+K L +I +FL + L PP
Sbjct: 596 GRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLG-SISEFLSRALQPP 654
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
++++NAI L+ IGAL +E +T LG L L V P + KML + +CLDP +T+
Sbjct: 655 EPLSVQNAIEYLKVIGALDENENLTLLGRHLSMLPVEPKLGKMLILGAIFNCLDPVMTVV 714
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF 857
RDPF +P + + A+F A Y SD LA++ AF+ WK+A+++ +
Sbjct: 715 SGLSVRDPFLMPFDKKDLAESAKAQFS-ARDY---SDHLALVRAFDGWKDAERQQSGYEY 770
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
C + F+S+ M + +RKQ L G + + CS + +I A++ AGL+P +
Sbjct: 771 CWKNFLSAQTMRAIDALRKQFFYLLKDTGLLGQKTEDCSMLSHDEHLIRAIICAGLFPGI 830
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNF---KLSFKKTDDCPLMVYDEITRGDGGMH 974
+ +K ++T +V LH +S+N K+ + P +V++E + + +
Sbjct: 831 CSV--VNKEKSITLKTMEDGQVLLHSNSVNAGIPKIPY------PWLVFNEKVKVN-SVF 881
Query: 975 VRNCTVVGPLPLLLLATEIA 994
+R+ + V LLL +++
Sbjct: 882 LRDSSGVSDSVLLLFGGDLS 901
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 155/218 (71%), Gaps = 16/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+++ E R LP +D + + NQVV++SGETGCGKTTQ+PQ++LE ++G C
Sbjct: 190 QKMAEFRQSLPAYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESEIEAARGGAC 249
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA +V+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 250 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLL 309
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R +++ +TH+IVDEIHER DF+L ++RD+LP P LRLILMS
Sbjct: 310 ---VDR-----------NLNGVTHVIVDEIHERGMNEDFLLIVLRDLLPHRPELRLILMS 355
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ATL+A+ FS YFGG P + +PGFTYPV++ +LED+L +
Sbjct: 356 ATLNAELFSSYFGGAPTLHIPGFTYPVRAHFLEDILEL 393
>gi|238478799|ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
gi|332194213|gb|AEE32334.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
Length = 1206
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 262/460 (56%), Gaps = 12/460 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ +P+ I LIE +L I GA+LVF+ GW+DIN +++L A+ D +K +
Sbjct: 552 LSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVL 611
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + S +Q+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G+ KE SYD
Sbjct: 612 LLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDAL 671
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SKA+A+QR GRAGR G CYHLY + + D+Q PE+ R P++ LC
Sbjct: 672 NNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLC 731
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L +I +FL + L PP +++++NA+ L+ IGAL DE +T LG+ L L V
Sbjct: 732 LQIKSLGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVE 790
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + +CLDP +T+ RDPF +P + +KF SD
Sbjct: 791 PKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDY----SD 846
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
L ++ A+ WK+A++ +C + F+SS + + MRKQ L+K + +++
Sbjct: 847 HLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNIEG 905
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
CS + ++ A++ AG++P V + +K ++T +V L+ S+N +
Sbjct: 906 CSKLSHDEHLVRAIICAGMFPGVCSV--VNKEKSITLKTMEDGQVLLYSSSVNGNVPMIP 963
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
P +V+++ + + + +R+ T V LLL +I+
Sbjct: 964 ---FPWLVFNDKVKVN-SVFLRDSTAVSDSVLLLFGDKIS 999
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 153/216 (70%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+++V R LP KD + + +NQVV++SGETGCGKTTQ+PQ++LE ++G TC
Sbjct: 290 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 349
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE IG+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL 409
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R + +TH++VDEIHER DF+L +++D+LP P L+LILMS
Sbjct: 410 ---VDR-----------SLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMS 455
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+A+ FS YFGG P + +PGFTYPV++ +LED L
Sbjct: 456 ATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYL 491
>gi|47220387|emb|CAF98486.1| unnamed protein product [Tetraodon nigroviridis]
Length = 882
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 253/468 (54%), Gaps = 38/468 (8%)
Query: 544 DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVP 603
DL L+ ++ I E GA+L FLPGW+DI +++L F S+ +I+PLHS +
Sbjct: 356 DLDLVADVIEHIDKCGEPGAVLCFLPGWQDIRAVQEKLEERQHFSSGSQ-MILPLHSSLS 414
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
Q+ VF+RP G RKI+L+TNIAET++TIDDVV+V+D+G KE++YDP VS L +
Sbjct: 415 VADQQAVFQRPQVGQRKIVLTTNIAETSVTIDDVVHVVDTGTHKEQNYDPLTKVSCLDTV 474
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 723
W+S+++ QR GRAGRCQ G YHL+ + + S+P F +PEI R P+E L +Q K+ PN
Sbjct: 475 WISRSNVTQRKGRAGRCQPGNSYHLFPRKQLESMPLFPMPEILRTPLESLVVQAKIHSPN 534
Query: 724 CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
C DFL + LD P +++A+ LQ+IG L E +T LGE++ C+ P + K+L
Sbjct: 535 CKAVDFLSQVLDSPELGAVKDAVQNLQNIGVLDKTETLTPLGERVACMPCDPRLGKVLVL 594
Query: 784 AILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFE 843
+ + C+ P + +A A RDPF N + RA +K + A SD L I A
Sbjct: 595 SAMFRCVLPMMCVA-ACLTRDPF----HNNLQNRAEISKVKAALSGSSYSDYLVFIRAVL 649
Query: 844 CWKNAKQRGQEA---WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE------DVSS 894
WK + G + + +S + + G+ Q T L + +P D S
Sbjct: 650 GWKRVQHEGDREDRDEYLDRLSLSRFSLRFIKGLISQFSTNLYEAELVPHANECQRDASL 709
Query: 895 CSHNARVPGIIHAVLMAGLYPMV-----------ARLRPPHKNGRRFVETAGGAKVRLHP 943
C+ ++ ++ AVL+AGLYP + R RP R + T+GG V LH
Sbjct: 710 CNQHSDEEELLKAVLLAGLYPNLIQVKKGVVTKGGRFRP----DRTSLRTSGGP-VLLHR 764
Query: 944 HSLNFKLSFKKTDDCP--LMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
S+N + +D P + + + +G + +R+ + V PL LLLL
Sbjct: 765 SSVN-----RGKEDFPSRWLTFFTAVKSNGIVFIRDSSTVHPLALLLL 807
Score = 199 bits (506), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 141/212 (66%), Gaps = 20/212 (9%)
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW---SKGETCKIVCTQP 243
+LP+ + + + S V+S++VV+I+GETGCGKTT++P+FLLE W KG C ++ TQP
Sbjct: 134 ELPVDAHRQRVVSAVESSRVVVIAGETGCGKTTRIPRFLLEE-WVRGGKGAECNVLVTQP 192
Query: 244 RRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS--SIVFCTNGVLLRLLVSQGVS 301
RRISA SVA R++ E G + +GY++RLES+ S +++F T GVLLR L S
Sbjct: 193 RRISAVSVAHRVAQEMGPALKRYVGYQVRLESRPPDQSGGALLFLTVGVLLRKLQSNPFL 252
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
R ++H++VDE+HERD +D +LA++R + P LR++LMSAT D
Sbjct: 253 R--------------GISHVVVDEVHERDINTDLLLALLRSSMEENPDLRVVLMSATGDK 298
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
R +QYFGGCPVIQVPGF +PV YLEDVL+
Sbjct: 299 QRLAQYFGGCPVIQVPGFMHPVSDKYLEDVLT 330
>gi|195165162|ref|XP_002023408.1| GL20210 [Drosophila persimilis]
gi|194105513|gb|EDW27556.1| GL20210 [Drosophila persimilis]
Length = 1223
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 268/496 (54%), Gaps = 56/496 (11%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFR-DTSKFVI 595
T+NPELI+ VL + ++ G IL+FLPG +I D LL + F KFV+
Sbjct: 664 TINPELIESVL-KYIVEGAHEWPRTGTILIFLPGMHEIQTVHDALLDHSLFSPRAGKFVL 722
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
+PLHS + Q VFKR P G RKI+LSTNIAET++TIDD V+V+D G MKEK +D
Sbjct: 723 VPLHSALSGEDQALVFKRAPAGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNR 782
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKRIPIEELC 714
N+ +L WVS+A+AKQR GRAGR G+C HLY+ R Q VPEI+R+P+E++
Sbjct: 783 NMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSHRFHQHILGQPVPEIQRVPLEQIV 842
Query: 715 LQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLS 772
L++K L+ + N L +TL+ P ++ A+ L+D+GAL D+++T LG L L
Sbjct: 843 LRIKTLETFASRNTLSVLLETLEAPSEDSVLGALTRLRDVGALDADDQLTPLGHHLAALP 902
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE-LASLYGG 831
V + K++ + + CLD LT+A + PF P++ KR A K + L +L G
Sbjct: 903 VDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLN----KRVEADKCKRLFAL--G 956
Query: 832 QSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
SD L V+ A+ W +RG A + S++F+S + + ++ Q L+ GF+
Sbjct: 957 NSDHLTVLQAYRKWLEVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFV 1016
Query: 889 PEDV----------------SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE 932
P DV + +HN ++ ++L A LYP + ++ P R +V+
Sbjct: 1017 PIDVPRRRKNASDNILQLTGADQNHNGDNNRLLTSLLCAALYPNIVKIMTPE---RVYVQ 1073
Query: 933 TAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH 974
TAGGA V++HP S+N +++ T P +VY E R ++
Sbjct: 1074 TAGGAVPREQGHHDLRFKTRGDGYVKIHPSSVNSQVA---TFQSPFLVYQEKVRT-SAIY 1129
Query: 975 VRNCTVVGPLPLLLLA 990
+R+C+++ + L+L A
Sbjct: 1130 IRDCSMLPLIALVLFA 1145
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 154/230 (66%), Gaps = 23/230 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
KD ++++E R +LP + + I + ++S+ VV+ISGETGCGK+TQVPQF+L++ + +
Sbjct: 374 KDERYQKVIEGRRQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRA 433
Query: 234 ------ET---CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
ET +I+CTQPRR+SA VAER++ ER + IG +GY+IRLE+K + + +
Sbjct: 434 LQLQPKETLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLS 493
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S + ++ ++H+IVDE+HER SDF+L I++++L
Sbjct: 494 FCTTGILLRRLSSDPM--------------LAGVSHVIVDEVHERSEESDFLLLILKNIL 539
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L++ILMSATL+A FS YFGG PV+ +PG T+PV+ +LED+L +
Sbjct: 540 RERKDLKVILMSATLNASLFSNYFGGAPVLDIPGRTFPVQQLFLEDILEL 589
>gi|198468584|ref|XP_001354748.2| GA13970 [Drosophila pseudoobscura pseudoobscura]
gi|198146476|gb|EAL31803.2| GA13970 [Drosophila pseudoobscura pseudoobscura]
Length = 1289
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 268/496 (54%), Gaps = 56/496 (11%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFR-DTSKFVI 595
T+NPELI+ VL + ++ G IL+FLPG +I D LL + F KFV+
Sbjct: 730 TINPELIESVL-KYIVEGAHEWPRTGTILIFLPGMHEIQTVHDALLDHSLFSPRAGKFVL 788
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
+PLHS + Q VFKR P G RKI+LSTNIAET++TIDD V+V+D G MKEK +D
Sbjct: 789 VPLHSALSGEDQALVFKRAPAGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNR 848
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKRIPIEELC 714
N+ +L WVS+A+AKQR GRAGR G+C HLY+ R Q VPEI+R+P+E++
Sbjct: 849 NMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSHRFHQHILGQPVPEIQRVPLEQIV 908
Query: 715 LQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLS 772
L++K L+ + N L +TL+ P ++ A+ L+D+GAL D+++T LG L L
Sbjct: 909 LRIKTLETFASRNTLSVLLETLEAPSEDSVLGALTRLRDVGALDADDQLTPLGHHLAALP 968
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE-LASLYGG 831
V + K++ + + CLD LT+A + PF P++ KR A K + L +L G
Sbjct: 969 VDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLN----KRVEADKCKRLFAL--G 1022
Query: 832 QSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
SD L V+ A+ W +RG A + S++F+S + + ++ Q L+ GF+
Sbjct: 1023 NSDHLTVLQAYRKWLEVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFV 1082
Query: 889 PEDV----------------SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE 932
P DV + +HN ++ ++L A LYP + ++ P R +V+
Sbjct: 1083 PIDVPRRRKNASDNILQLTGADQNHNGDNNRLLTSLLCAALYPNIVKIMTPE---RVYVQ 1139
Query: 933 TAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH 974
TAGGA V++HP S+N +++ T P +VY E R ++
Sbjct: 1140 TAGGAVPREQGHHDLRFKTRGDGYVKIHPSSVNSQVA---TFQSPFLVYQEKVR-TSAIY 1195
Query: 975 VRNCTVVGPLPLLLLA 990
+R+C+++ + L+L A
Sbjct: 1196 IRDCSMLPLIALVLFA 1211
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 154/230 (66%), Gaps = 23/230 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
KD ++++E R +LP + + I + ++S+ VV+ISGETGCGK+TQVPQF+L++ + +
Sbjct: 440 KDERYQKVIEGRRQLPAFAEIESILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRA 499
Query: 234 ------ET---CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
ET +I+CTQPRR+SA VAER++ ER + IG +GY+IRLE+K + + +
Sbjct: 500 LQLQPKETLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLS 559
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S + ++ ++H+IVDE+HER SDF+L I++++L
Sbjct: 560 FCTTGILLRRLASDPM--------------LAGVSHVIVDEVHERSEESDFLLLILKNIL 605
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L++ILMSATL+A FS YFGG PV+ +PG T+PV+ +LED+L +
Sbjct: 606 RERKDLKVILMSATLNASLFSNYFGGAPVLDIPGRTFPVQQLFLEDILEL 655
>gi|426246499|ref|XP_004017031.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Ovis aries]
Length = 1365
Score = 276 bits (706), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 257/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F + ++
Sbjct: 835 MNPHKINLDLILELLIYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFF-SERY 893
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 894 KVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 953
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 954 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1013
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1014 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1069
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1070 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1124
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1125 MADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAG 1184
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F+ S+ R ++ AVL AGLY V ++ + VET
Sbjct: 1185 FLSSTTSNSFEGNRATQNFSFQEIALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVET 1244
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1245 AQG-KAQVHPSSVNRDLQI-----YGWLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1297
Query: 994 AV 995
V
Sbjct: 1298 EV 1299
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 155/244 (63%), Gaps = 24/244 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
K E V +L +++ +++++ER +LP+ + I T+ ++VV+++GETG GK
Sbjct: 537 KVEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRSSIVETLKRHRVVVVAGETGSGK 596
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 597 STQVPHFLLEDLLLNEWG-ATKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCG 655
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 656 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 701
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 702 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 761
Query: 389 EDVL 392
ED++
Sbjct: 762 EDII 765
>gi|194762936|ref|XP_001963590.1| GF20206 [Drosophila ananassae]
gi|190629249|gb|EDV44666.1| GF20206 [Drosophila ananassae]
Length = 1289
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 270/503 (53%), Gaps = 57/503 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR 588
K + + P +I+ LIE +L+ I D G IL+FLPG+++I D LL N F
Sbjct: 721 KSIYLMEPMVINPELIESVLKFIVEGDHDWPREGTILIFLPGFQEIQSVHDALLDNALFS 780
Query: 589 -DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
KF+++PLHS + S Q VFK+ PPG RKI+LSTNIAET++TIDD V+V+D G MK
Sbjct: 781 PRAGKFILVPLHSALSSEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMK 840
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIK 706
EK +D N+ +L WVS+A+AKQR GRAGR G+C HLY+ R Q VPEI+
Sbjct: 841 EKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSFRFHQHILAQPVPEIQ 900
Query: 707 RIPIEELCLQVKLLDPNC--NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E + L++K L N L +TL+ P ++ A+ L+D+GAL ++++T L
Sbjct: 901 RVPLEAIVLRIKTLQTFAARNTLSVLLETLEAPSEDSVLGALTRLRDVGALDAEDQLTPL 960
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V + K++ + + CLD LT+A + PF P + + F
Sbjct: 961 GHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPFNKRSEADKCKKMFA 1020
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTE 881
L G SD L V+ A++ W + +RG A + S++F+S + + ++ Q
Sbjct: 1021 L-----GNSDHLTVLNAYKKWLDVAKRGNYAASRNYASEHFLSLNTLETIADLKYQYLEL 1075
Query: 882 LIKNGFIPEDV-----SSCSHNARVPGI-----------IHAVLMAGLYPMVARLRPPHK 925
L+ GF+P +V ++C + ++ G+ + ++L A LYP + ++ P
Sbjct: 1076 LVSIGFVPVNVPRRRKNACDNILQLTGVEQNQNGENNRLLTSLLCAALYPNIVKIMTPE- 1134
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
R +++TAGGA V++HP S+N +++ + P +V+ E
Sbjct: 1135 --RVYIQTAGGAVPREPSAQDLRFKTRGDGYVKIHPSSVNSQVAVFQA---PFLVFQEKV 1189
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
R +++R+C+++ + ++L A
Sbjct: 1190 RT-TAIYIRDCSMLPLIAMVLFA 1211
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 152/230 (66%), Gaps = 23/230 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
K+ +++++ R KLP + + I + ++++ VV+ISGETGCGK+TQVPQF+L++ + +
Sbjct: 440 KEDRYQKVIDGRRKLPAFAEIERILALIETSPVVVISGETGCGKSTQVPQFILDNWFFRA 499
Query: 234 ---------ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
+I+CTQPRR+SA VAER++ ER + IG +GY+IRLE+K + +
Sbjct: 500 LQLSPKESLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSASTRLS 559
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S + + ++TH+IVDE+HER SDF+L I++++L
Sbjct: 560 FCTTGILLRRLASDPM--------------LGSVTHVIVDEVHERSEESDFLLLILKNLL 605
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L++ILMSATL+A FS YFGG PV+ +PG T+PV+ F+LED+L +
Sbjct: 606 RERNDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQFFLEDILEM 655
>gi|326664625|ref|XP_699339.5| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Danio rerio]
Length = 1173
Score = 276 bits (705), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 248/459 (54%), Gaps = 23/459 (5%)
Query: 544 DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVP 603
DL L+ ++ I E GA+L FLPGW++I + +L +R S+ +I+PLHS +
Sbjct: 621 DLDLVADVIDHIHRTGEPGAVLCFLPGWQEIKAVQQQLEEKQAYRSGSQ-IILPLHSSMA 679
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+Q+ VF+RPP G RKI+L+TNIAET+ITIDD+V+V+D+G KE++YDP VS L +
Sbjct: 680 VSEQQVVFQRPPAGQRKIVLATNIAETSITIDDIVHVVDAGVQKEQNYDPRTKVSALNTV 739
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 723
W+S+A+ QR GRAGRCQ G YHL+ + + + F VPEI R P+E + +Q K+ P
Sbjct: 740 WISQANVTQRRGRAGRCQPGHSYHLFPRKQLERMEPFPVPEILRTPLESVVMQAKIHCPE 799
Query: 724 CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
EDFL + LD P + +R A+ L DIG L E +T LG + C+S P + K+L F
Sbjct: 800 SKAEDFLSQVLDSPDTQAVRTAVKNLMDIGVLDASEDLTPLGHHVSCMSCDPRLGKVLVF 859
Query: 784 AILMDCLDPALT-LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ L C+ P L+ +AC + RDPF S + + AK EL+ G SD L
Sbjct: 860 SALFSCVQPVLSVVACLT--RDPFY--NSLQNRTLVSKAKAELSGSSG--SDYLVFSRVV 913
Query: 843 ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV------SSCS 896
+ W+ R + ++ +S + + G+ +Q L + G + S +
Sbjct: 914 QSWREQHSRDSRQDYLDKHTLSGASLRFIHGLMQQFSDNLCEAGLVDHSAECLRLSSPVN 973
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPP--HKNGRRFVETAG----GAKVRLHPHSLNFKL 950
++ +I AVL+AGLYP + +++ K+GR E V LH S+N
Sbjct: 974 QQSKEEQLITAVLLAGLYPNLIQVKKGVVTKSGRFRAENVSFRTESGPVLLHRSSVNRD- 1032
Query: 951 SFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
K+ + + + G + +R+ TVV PL LLLL
Sbjct: 1033 --KQHLWSRWLTFFSAVKSSGQVFIRDSTVVHPLALLLL 1069
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 142/208 (68%), Gaps = 14/208 (6%)
Query: 186 SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVCTQP 243
++LP+ + K+ I V S+QVV+ISGETGCGKTT++P+FLLE + +G C ++ TQP
Sbjct: 392 AELPVDAHKESILEAVRSSQVVVISGETGCGKTTRIPRFLLEDGVLRGEGAECNVLVTQP 451
Query: 244 RRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRL 303
RRISA SVA+R++ E G + +GY++RLES+ + S G LL L + + +L
Sbjct: 452 RRISAVSVAQRVAHEIGPALQHCVGYQVRLESRPPERS------GGALLFLTLGVLLKKL 505
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADR 363
+ + + ++H+IVDE+HERD +D +L ++R +L P L+++LMSA+ D+ R
Sbjct: 506 Q------SNPRLEGISHVIVDEVHERDVQTDLLLHLLRCVLSLRPELKVLLMSASGDSQR 559
Query: 364 FSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+QYFGGCPV++VPGF +PV++ +LED+
Sbjct: 560 LAQYFGGCPVLRVPGFMHPVRARFLEDM 587
>gi|326921357|ref|XP_003206927.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DHX30-like, partial [Meleagris gallopavo]
Length = 1115
Score = 276 bits (705), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 260/471 (55%), Gaps = 27/471 (5%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
++DL LI L+ +I E G IL FLPGW++I + RLL S+++++P+HS
Sbjct: 576 VLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLL-EMLGSQNSRYLVLPVHSN 634
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P + Q+ +F+RPPPG RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L+
Sbjct: 635 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 694
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+ WVSK++ QR GRAGRCQ+G YHL+ + R +P +QVPEI R P+E L +Q K+
Sbjct: 695 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHM 754
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
P +FL K LD P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 755 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAI 814
Query: 782 FFAILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
A + CL P L + +C + RDPF S + + RA K + SD LA +
Sbjct: 815 VLASIYRCLHPLLVIVSCLT--RDPF----SSSLQNRAEVDKAKAVLSRESGSDHLAFVR 868
Query: 841 AFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI--PEDV--- 892
A W+ ++R A + Y++ + + G+ KQ L + + P D
Sbjct: 869 AVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMP 928
Query: 893 -SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
S C+ + ++ VLMAGLYP + ++R + G+ + V LH +
Sbjct: 929 SSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRTKAGTVLLHKST 988
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA-TEIAV 995
+N + S + + Y + +GG+ VR+ + V PL +LL+ T+I V
Sbjct: 989 INREASKLYSR---WLTYFMAVKSNGGVFVRDSSQVHPLAVLLMTDTDIHV 1036
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 127/224 (56%), Gaps = 44/224 (19%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVC 240
+E LP+ KD I S ++ N VV+I+G+TGCGKTT++PQ LLEH + +G C +V
Sbjct: 386 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVI 445
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRRISA SVA+R++ E G N+ N+GY++RLE
Sbjct: 446 TQPRRISAISVAQRVAQELGPNMRKNVGYQVRLEXX------------------------ 481
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
+VDE+HERD +DF+L +++ + P LRL+LMSAT D
Sbjct: 482 ------------------XXXVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGD 523
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLD 404
RFS YFG CPV++VPGF YPVK +YLE++L+ L H +
Sbjct: 524 NQRFSHYFGDCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYE 567
>gi|449492012|ref|XP_002191495.2| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Taeniopygia
guttata]
Length = 1173
Score = 275 bits (704), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 267/492 (54%), Gaps = 33/492 (6%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
++DL LI L+ +I E G IL FLPGW++I + RLL S+++++P+HS
Sbjct: 634 VLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM-LGSQNSRYLVLPVHSN 692
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P + Q+ +F+RPPPG RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L+
Sbjct: 693 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 752
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+ WVSK++ QR GRAGRCQ+G YHL+ + R +P +QVPEI R P+E L +Q K+
Sbjct: 753 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHM 812
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
P +FL K LD P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 813 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAI 872
Query: 782 FFAILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
A + CL P L + +C + RDPF S + + RA K + SD LA +
Sbjct: 873 VLASIYRCLHPLLVIVSCLT--RDPF----SSSLQNRAEVDKAKAVLSRESGSDHLAFVR 926
Query: 841 AFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI--PEDV--- 892
A W+ ++R A + Y++ + + G+ KQ L + + P D
Sbjct: 927 AVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMP 986
Query: 893 -SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
S C+ + ++ VLMAGLYP + ++R + G+ + V LH +
Sbjct: 987 SSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRTKAGTVLLHKST 1046
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA-TEIAVAPAPDNEDD 1004
+N + S + + Y + +GG+ VR+ + V PL +LL+ T+I V DD
Sbjct: 1047 INREASKLYSR---WLTYFMAVKSNGGVFVRDSSQVHPLAVLLMTDTDIHV------RDD 1097
Query: 1005 DEDDDMSDDDAD 1016
+S D+D
Sbjct: 1098 GWRATVSLTDSD 1109
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 175/298 (58%), Gaps = 26/298 (8%)
Query: 114 LQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCK----PKMSKAEIAMKVESLT 169
+++ HYP D E ++ A+ K G D P + E+ + L
Sbjct: 347 IENYLNHYPVDIRESRPRI-ADDMMNLTKESGAISDAITGKTYIPMLEAEEVRLSQNLLA 405
Query: 170 SRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH- 228
+ A+ +E LP+ KD I S ++ N VV+I+G+TGCGKTT++PQ LLEH
Sbjct: 406 LWKRRGASW----QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHY 461
Query: 229 -IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFC 286
+ +G C +V TQPRRISA SVA+R++ E G N+ N+GY++RLESK + +++FC
Sbjct: 462 ILEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFC 521
Query: 287 TNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS 346
T G+LLR L QG P+ + VS H++VDE+HERD +DF+L +++ +
Sbjct: 522 TVGILLRKL--QG---------NPSLEGVS---HVVVDEVHERDVNTDFLLILLKGIQKL 567
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLD 404
P LRL+LMSAT D RFS YFG CPV++VPGF YPVK +YLE++L+ L H +
Sbjct: 568 NPDLRLVLMSATGDNQRFSHYFGDCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYE 625
>gi|61098106|ref|NP_001012869.1| putative ATP-dependent RNA helicase DHX30 precursor [Gallus gallus]
gi|82233708|sp|Q5ZI74.1|DHX30_CHICK RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|53136480|emb|CAG32569.1| hypothetical protein RCJMB04_29l1 [Gallus gallus]
Length = 1231
Score = 275 bits (704), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 267/492 (54%), Gaps = 33/492 (6%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
++DL LI L+ +I E G IL FLPGW++I + RLL S+++++P+HS
Sbjct: 692 VLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM-LGSQNSRYLVLPVHSN 750
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P + Q+ +F+RPPPG RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L+
Sbjct: 751 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 810
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+ WVSK++ QR GRAGRCQ+G YHL+ + R +P +QVPEI R P+E L +Q K+
Sbjct: 811 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHM 870
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
P +FL K LD P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 871 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAI 930
Query: 782 FFAILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
A + CL P L + +C + RDPF S + + RA K + SD LA +
Sbjct: 931 VLASIYRCLHPLLVIVSCLT--RDPF----SSSLQNRAEVDKAKAVLSRESGSDHLAFVR 984
Query: 841 AFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI--PEDV--- 892
A W+ ++R A + Y++ + + G+ KQ L + + P D
Sbjct: 985 AVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMP 1044
Query: 893 -SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
S C+ + ++ VLMAGLYP + ++R + G+ + V LH +
Sbjct: 1045 SSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRTKAGTVLLHKST 1104
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA-TEIAVAPAPDNEDD 1004
+N + S + + Y + +GG+ VR+ + V PL +LL+ T+I V DD
Sbjct: 1105 INREASKLYSR---WLTYFMAVKSNGGVFVRDSSQVHPLAVLLMTDTDIHV------RDD 1155
Query: 1005 DEDDDMSDDDAD 1016
+S D+D
Sbjct: 1156 GWRATVSLTDSD 1167
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 152/225 (67%), Gaps = 17/225 (7%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVC 240
+E LP+ KD I S ++ N VV+I+G+TGCGKTT++PQ LLEH + +G C +V
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVI 532
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVSQG 299
TQPRRISA SVA+R++ E G N+ N+GY++RLESK + +++FCT G+LLR L QG
Sbjct: 533 TQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKL--QG 590
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P+ + VS H++VDE+HERD +DF+L +++ + P LRL+LMSAT
Sbjct: 591 ---------NPSLEGVS---HVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATG 638
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLD 404
D RFS YFGGCPV++VPGF YPVK +YLE++L+ L H +
Sbjct: 639 DNQRFSHYFGGCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYE 683
>gi|348500733|ref|XP_003437927.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Oreochromis niloticus]
Length = 1156
Score = 275 bits (704), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 256/465 (55%), Gaps = 30/465 (6%)
Query: 544 DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVP 603
DL L+ ++ I E GA+L FLPGW+DI +++L P F S+ +I+PLHS +
Sbjct: 615 DLDLVADVIEHIDRCGEPGAVLCFLPGWQDIKAVQEKLEEKPHFSSGSQ-MILPLHSSLS 673
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
Q+ VF+RP G RKI+L+TNIAET++TIDD+V+V+D+G KE++YDP VS L +
Sbjct: 674 VADQQAVFQRPQVGQRKIVLATNIAETSVTIDDIVHVVDAGTHKEQNYDPRTKVSCLDTV 733
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 723
W+S+++ QR GRAGRCQ G YHL+S+ + SLP F +PEI R P+E L +Q K+ PN
Sbjct: 734 WISRSNVTQRKGRAGRCQPGQSYHLFSRKQLESLPPFPIPEILRTPLESLVVQAKIHSPN 793
Query: 724 CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
DFL + LD P ++R+A+ LQDIG L E++T LG+++ C+S P + K+L
Sbjct: 794 SKAVDFLSQVLDSPEPESVRDAVQNLQDIGVLDKTERLTPLGDRVACMSCDPRLGKILVL 853
Query: 784 AILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFE 843
+ + C+ P L++A A RDPF + + RA K + A SD L A
Sbjct: 854 SSMFRCVLPMLSVA-ACLTRDPFHNSL----QNRALVNKAKEALSGSSNSDYLVFSRAVL 908
Query: 844 CWKNAKQRGQEA---WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI--PED----VSS 894
W+ +Q G F ++ +S + + G+ Q L G + P D S
Sbjct: 909 GWRKVQQEGDREDRDEFLERHTLSKASLRFINGLISQFSENLHDAGLVSHPGDCQRHTSL 968
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPP-HKNGRRF------VETAGGAKVRLHPHSLN 947
+ ++ ++ AVL+AGLYP + +++ G RF + T G V LH S+N
Sbjct: 969 YNEHSNQDELLKAVLLAGLYPNLIQVKKGVVTKGGRFRPNSISLRTLSGP-VLLHRSSVN 1027
Query: 948 FKLSFKKTDDCP--LMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+ +D P + + + +G + +R+ + V PL LLLL
Sbjct: 1028 -----RGKEDLPSRWLTFFSAIKSNGNVFIRDSSAVHPLALLLLT 1067
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 139/210 (66%), Gaps = 18/210 (8%)
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCTQPR 244
+LP+ + + S V +++VV+I+GETGCGKTT++P+FLLE G C I+ TQPR
Sbjct: 396 ELPVDAHCQHVISAVQTSRVVVIAGETGCGKTTRIPRFLLEDRVRGGSGAECNILVTQPR 455
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHS--SIVFCTNGVLLRLLVSQGVSR 302
RISA SVA R++ E G + ++GY++RLES+ +HS +++F T GVLLR L S
Sbjct: 456 RISAVSVAHRVAQEMGPALKQSVGYQVRLESRLPEHSGGAMLFLTVGVLLRKLKSNPT-- 513
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
+ ++H++VDE+HERD +D +LA++R L P L ++LMSAT D
Sbjct: 514 ------------LKGISHVVVDEVHERDINTDLLLALLRTSLNENPDLWVVLMSATGDNQ 561
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
R +QYFGGCP+++VPGF +PV+ YLEDVL
Sbjct: 562 RLAQYFGGCPIVKVPGFMHPVRDKYLEDVL 591
>gi|449506389|ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1144
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/503 (33%), Positives = 280/503 (55%), Gaps = 12/503 (2%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQ 550
+ K +T QL ++ + ++ +++ ++ + + D L++ P+ I LIE
Sbjct: 458 QEKVWKTQKQLAPRKRKNQITSLVEDALDKSTFGNYSSNTRDS-LSSWMPDCIGFNLIEA 516
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
+L IC GA+LVFL GWEDI+ RD+L A+P D ++ +++ H + + +Q+ +
Sbjct: 517 VLCHICRKERPGAVLVFLTGWEDISSLRDQLRAHPLLGDPNRVLLLTCHGSMATSEQRLI 576
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
F++P RK++L+TN+AE +ITI+DVV+VID G+ KE +YD NN L SW+S+ASA
Sbjct: 577 FEKPAQNVRKVVLATNMAEASITINDVVFVIDCGKAKETTYDALNNTPCLLPSWISQASA 636
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFL 730
+QR GRAGR Q G CYHLY + + ++Q+PE+ R P+ LCLQ+K L + ++ +FL
Sbjct: 637 RQRRGRAGRVQPGKCYHLYPKCVFTAFSEYQLPELLRTPLNSLCLQIKSLQVS-SVGEFL 695
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
L PP + ++NAI L+ IGA E +T LG+ L L V P + KML + C
Sbjct: 696 SSALQPPKPLAVQNAIDFLKMIGAFDEKENLTNLGKFLSMLPVDPKLGKMLIMGAIFQCF 755
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+ RDPF LP ++K A AK ++ SD +A++ A+E WK+A++
Sbjct: 756 DPILTIVSGLSVRDPFLLP--QDKKNLAGIAKGRFSA--KDYSDHMALVRAYEGWKDAER 811
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLM 910
G +C + F+S + + +R+Q L G + D S+ + + ++ A++
Sbjct: 812 EGSSYEYCWRNFLSMQTLQAIDSLRRQFTFILKDAGIVDLDGSTSNKLSHNQSLVRAIIC 871
Query: 911 AGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGD 970
+GL+P VA + H+ +T +V L+ +S+N + + T P +V+ E + +
Sbjct: 872 SGLFPGVASV--VHRETSMSFKTMDDGQVLLYANSVNARYN---TIPFPWLVFGEKVKVN 926
Query: 971 GGMHVRNCTVVGPLPLLLLATEI 993
+ +R+ T + L+L +
Sbjct: 927 -TVFLRDSTGISDSMLILFGGAV 948
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 154/216 (71%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
R+I++ R LP K+ + + NQVV+ISGETGCGKTTQ+PQ+LLE +G C
Sbjct: 239 RKILDFRRSLPAFKEKEKLLQAIAENQVVVISGETGCGKTTQLPQYLLESEIETGRGAFC 298
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA +V+ER+S+ERGE++G+ +GYK+RLE GK++ ++FCT+G+LLR L+
Sbjct: 299 SIICTQPRRISAMAVSERVSIERGESLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLL 358
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
S ++ +TH+ VDEIHER DF+L +++D+LP LRLILMS
Sbjct: 359 SD--------------RNLDGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMS 404
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+A+ FS YFGG P I +PGFT+PV+S++LEDVL
Sbjct: 405 ATLNAELFSSYFGGAPTIHIPGFTFPVRSYFLEDVL 440
>gi|327287304|ref|XP_003228369.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like [Anolis
carolinensis]
Length = 1239
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 261/471 (55%), Gaps = 27/471 (5%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
++DL LI L+ +I E G IL FLPGW++I + RLL + S+++++P+HS
Sbjct: 700 VLDLELITDLILQIDAHGEPGGILCFLPGWQEIKGVQQRLLES-LGSHNSRYLVLPVHSN 758
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P + Q+ +F RPPPG RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L+
Sbjct: 759 IPMMDQQSIFPRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 818
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+ WVSK++ QR GRAGRCQ+G YHL+ + R +P FQVPEI R P+E L +Q K+
Sbjct: 819 TVWVSKSNVIQRRGRAGRCQSGFAYHLFPRSRLDRMPTFQVPEILRTPLENLVVQAKIHM 878
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
P +FL K LD P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 879 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDHREGLTTLGKRLAQISTDPRLAKAI 938
Query: 782 FFAILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
A + C+ P L + +C + RDPF+ S + AK L+ G SD LA +
Sbjct: 939 VLASIYRCIHPLLVIVSCLT--RDPFS--SSLQNRTEVDKAKAILSRESG--SDHLAFVR 992
Query: 841 AFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE------D 891
A W++ ++R A + Y + + + + G+ KQ L + +P
Sbjct: 993 AVAGWEDVLRRRDSRARDNYLQDYLLYAPSLRFINGLVKQFSENLYEAYLVPTPSDCLLP 1052
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
S C+ + ++ VLMAGLYP + ++R + G+ + V LH +
Sbjct: 1053 SSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYTYRTKAGTVLLHKST 1112
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA-TEIAV 995
+N + S + + Y + +GG+ VR+ + V PL +LL+ T+I V
Sbjct: 1113 INREASKLYSR---WLTYFMAVKSNGGVFVRDSSQVHPLAVLLMTDTDIHV 1160
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 181/297 (60%), Gaps = 24/297 (8%)
Query: 114 LQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPK---MSKAEIAMKVESLTS 170
+++ H+P D E +L A+ K G D MS +E +SL +
Sbjct: 413 IENYLNHFPVDTRESRPRL-ADDMMNLSKESGSLSDAITGKTYLPMSDSEEVRLSQSLLA 471
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-- 228
++ + Q E LP+ S +D I S V+ N VV+I+G+TGCGKTT++PQ +LE+
Sbjct: 472 LWKRRGSSWQ---ESHTLPVDSHRDTILSAVEQNPVVVIAGDTGCGKTTRIPQLMLENYI 528
Query: 229 IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R++ E G N+ N+GY++RLESK + +++FCT
Sbjct: 529 LDGRGAQCNMIITQPRRISAISVAQRVAQELGSNMRKNVGYQVRLESKPPARGGALLFCT 588
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L QG RL+ ++H+IVDE+HERD +DF+L +++ +
Sbjct: 589 VGILLRKL--QGNPRLE------------GVSHVIVDEVHERDVNTDFLLILLKGVQKQN 634
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLD 404
P+LRL+LMSAT D RFSQYFG CPV++VPGF YPVK +YLE+++++L H +
Sbjct: 635 PNLRLVLMSATGDNQRFSQYFGDCPVVKVPGFMYPVKEYYLEEIMNMLGRHRHRHYE 691
>gi|291395363|ref|XP_002714081.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Oryctolagus
cuniculus]
Length = 1366
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/484 (37%), Positives = 262/484 (54%), Gaps = 46/484 (9%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+NP I+L LI +LL + +D +GA+L+FLPG I + D LL+N +
Sbjct: 838 MNPHKINLDLILELL--VYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSE 894
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 895 RYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 954
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+E
Sbjct: 955 HESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLE 1014
Query: 712 ELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEK 767
ELCL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+
Sbjct: 1015 ELCLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQH 1070
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V+ + KML F + CLDP TLA + PFT PI K+ A AK LA
Sbjct: 1071 LAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKEEADLAKSALAI 1128
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
SD L + A+ WK A+Q G E +C + F++ + L ++++L +L+K
Sbjct: 1129 ---ADSDHLTIYNAYLGWKKAQQEGGYRSELAYCRRNFLNRTALLTLEDVKQEL-MKLVK 1184
Query: 885 NGFIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFV 931
S+ R ++ AVL AGLY V ++ + V
Sbjct: 1185 AAGFSSTTSNNWEGNRASQTLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIV 1244
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
ETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1245 ETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKIRY-ARVYLRETTLITPFPVLLFGG 1297
Query: 992 EIAV 995
+I V
Sbjct: 1298 DIEV 1301
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 157/243 (64%), Gaps = 24/243 (9%)
Query: 159 AEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
AE V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK+
Sbjct: 541 AEDLEPVRNLFRKLQSSPKYQRLLKERQQLPVFKHRESIVETLKRHRVVVVAGETGSGKS 600
Query: 219 TQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGY 269
TQVP FLLE + W + C I+CTQPRRISA S+A R+ E G EN G N GY
Sbjct: 601 TQVPHFLLEDLLLNEWGTSK-CNIICTQPRRISAVSLATRVCDELGCENGPGGRNSLCGY 659
Query: 270 KIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHER 329
+IR+ES+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER
Sbjct: 660 QIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHER 705
Query: 330 DRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LE
Sbjct: 706 SVQSDFLLVILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLE 765
Query: 390 DVL 392
D++
Sbjct: 766 DII 768
>gi|449435188|ref|XP_004135377.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1144
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/503 (33%), Positives = 280/503 (55%), Gaps = 12/503 (2%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQ 550
+ K +T QL ++ + ++ +++ ++ + + D L++ P+ I LIE
Sbjct: 458 QEKVWKTQKQLAPRKRKNQITSLVEDALDKSTFGNYSSNTRDS-LSSWMPDCIGFNLIEA 516
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
+L IC GA+LVFL GWEDI+ RD+L A+P D ++ +++ H + + +Q+ +
Sbjct: 517 VLCHICRKERPGAVLVFLTGWEDISSLRDQLRAHPLLGDPNRVLLLTCHGSMATSEQRLI 576
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
F++P RK++L+TN+AE +ITI+DVV+VID G+ KE +YD NN L SW+S+ASA
Sbjct: 577 FEKPAQNVRKVVLATNMAEASITINDVVFVIDCGKAKETTYDALNNTPCLLPSWISQASA 636
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFL 730
+QR GRAGR Q G CYHLY + + ++Q+PE+ R P+ LCLQ+K L + ++ +FL
Sbjct: 637 RQRRGRAGRVQPGKCYHLYPKCVFTAFSEYQLPELLRTPLNSLCLQIKSLQVS-SVGEFL 695
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
L PP + ++NAI L+ IGA E +T LG+ L L V P + KML + C
Sbjct: 696 SSALQPPKPLAVQNAIDFLKMIGAFDEKENLTNLGKFLSMLPVDPKLGKMLIMGAIFQCF 755
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+ RDPF LP ++K A AK ++ SD +A++ A+E WK+A++
Sbjct: 756 DPILTIVSGLSVRDPFLLP--QDKKNLAGIAKGRFSA--KDYSDHMALVRAYEGWKDAER 811
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLM 910
G +C + F+S + + +R+Q L G + D S+ + + ++ A++
Sbjct: 812 EGSSYEYCWRNFLSMQTLQAIDSLRRQFTFILKDAGIVDLDGSTSNKLSHNQSLVRAIIC 871
Query: 911 AGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGD 970
+GL+P VA + H+ +T +V L+ +S+N + + T P +V+ E + +
Sbjct: 872 SGLFPGVASV--VHRETSMSFKTMDDGQVLLYANSVNARYN---TIPFPWLVFGEKVKVN 926
Query: 971 GGMHVRNCTVVGPLPLLLLATEI 993
+ +R+ T + L+L +
Sbjct: 927 -TVFLRDSTGISDSMLILFGGAV 948
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 154/216 (71%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
R+I++ R LP K+ + + NQVV+ISGETGCGKTTQ+PQ+LLE +G C
Sbjct: 239 RKILDFRRSLPAFKEKEKLLQAIAENQVVVISGETGCGKTTQLPQYLLESEIETGRGAFC 298
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA +V+ER+S+ERGE++G+ +GYK+RLE GK++ ++FCT+G+LLR L+
Sbjct: 299 SIICTQPRRISAMAVSERVSIERGESLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLL 358
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
S ++ +TH+ VDEIHER DF+L +++D+LP LRLILMS
Sbjct: 359 SD--------------RNLDGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMS 404
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+A+ FS YFGG P I +PGFT+PV+S++LEDVL
Sbjct: 405 ATLNAELFSSYFGGAPTIHIPGFTFPVRSYFLEDVL 440
>gi|68611225|emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group]
gi|116309362|emb|CAH66443.1| B0308C03.3 [Oryza sativa Indica Group]
Length = 1439
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 271/523 (51%), Gaps = 76/523 (14%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
++ L +N ++ID L+E L+ I + GA+LVFLPG +I+ DRL A+ F S
Sbjct: 864 NQNLKRLNEDVIDFDLLEDLICYIDENCPPGAVLVFLPGVAEIDMLIDRLSASVRFGRES 923
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
I+PLHS++ Q+KVF+ PP RKII++T+IAET+ITIDDV+YV+D+G+ KE Y
Sbjct: 924 SDWILPLHSLLAPTDQRKVFQSPPENIRKIIVATDIAETSITIDDVIYVVDTGKHKENRY 983
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD-FQVPEIKRIPI 710
+P +S++ W+S+A+AKQR GRAGR + G+C+ LY++ R + FQVPE+ R+P+
Sbjct: 984 NPQKKMSSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFEKMMRPFQVPEMLRMPL 1043
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
ELCLQ+K L I+ FL K ++PP I +AI +L +GA E+++ LG L
Sbjct: 1044 TELCLQIKSLHLG-GIKSFLLKAIEPPKEEAISSAIDLLYQVGAFEGHEELSPLGYHLAK 1102
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL----- 825
L V L+ KM+ + + CL P L++A Y+ PF P +EK+ AK L
Sbjct: 1103 LPVDVLIGKMMLYGAIFGCLSPILSVAAFLSYKSPFISP--KDEKQNVEKAKASLMNENL 1160
Query: 826 ----ASLYGGQSDQLAVIAAFECW-----KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
++ QSD L ++ A+ W +N + + FC ++++S VM M+ MR
Sbjct: 1161 DGSASTADNKQSDHLLMVIAYNKWSRILRENGARSAHQ--FCRSFYLNSTVMYMVRDMRL 1218
Query: 877 QLQTELIKNGF--IPED----VSSCSHN----------------ARVPGIIHAVLMAGLY 914
Q T L G IP+D V N AR ++ +V+ AGLY
Sbjct: 1219 QYGTLLADIGLLDIPKDSLRPVDGTRKNTLESWFANMSLPFNLYARYSSVVKSVICAGLY 1278
Query: 915 PMVA----------------------RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSF 952
P VA + RP +GRR +V +HP S+N L
Sbjct: 1279 PNVAATLEGVDPGALGGRKPSDFLSGKDRPRWYDGRR--------EVHIHPSSMNHSL-- 1328
Query: 953 KKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
K P +V+ E + +R+ +V+ P LLL + +
Sbjct: 1329 -KAGQYPFLVFLEKVE-TSKVFLRDTSVISPYSLLLFGGTMVI 1369
Score = 196 bits (497), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 147/229 (64%), Gaps = 25/229 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK- 232
K ++ +++E R+ LPIS FKD + N V+++ GETGCGKTTQVPQF+L+ +
Sbjct: 575 KQSSYLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDMIESE 634
Query: 233 -GETCKIVCTQPRRISATSVAERISVERGENIGDN----IGYKIRLESKGGKHSSIVFCT 287
G C IVCTQPRRI+A SVAER+S ER E+ + +GY++RL+S + + ++FCT
Sbjct: 635 LGGYCSIVCTQPRRIAAISVAERVSSERCESSPGSKDSLVGYQVRLDSARNERTKLLFCT 694
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L +D+S +TH++VDE+HER DF+L +++ ++
Sbjct: 695 TGILLRKL--------------SGNNDLSDVTHVVVDEVHERTILGDFLLIVLKSLVEKR 740
Query: 348 PH-----LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+ L++ILMSAT+D+ F++YFG CPVI V G T+PV S +LEDV
Sbjct: 741 SNQPGRKLKVILMSATVDSSLFARYFGDCPVINVEGRTHPVSSHFLEDV 789
>gi|73949721|ref|XP_535238.2| PREDICTED: ATP-dependent RNA helicase DHX29 [Canis lupus familiaris]
Length = 1367
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 188/519 (36%), Positives = 268/519 (51%), Gaps = 56/519 (10%)
Query: 514 IKKHME----NALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSE-- 560
IKKH E N S + KY + +NP I+L LI +LL I +D
Sbjct: 802 IKKHQEYIPVNTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELL--IYLDRSPQ 859
Query: 561 ----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
+GA+L+FLPG I + D L + F + ++ +I LHS++ + Q F PPP
Sbjct: 860 FRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFF-SERYKVIALHSILSTQDQAAAFTLPPP 918
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
G RKI+L+TNIAET ITI DVV+VID+GR KE Y + +S+L ++VSKASA QR GR
Sbjct: 919 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 978
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI---EDFLQKT 733
AGR + G C+ +Y++ R D+ VPEI R+P+EELCL + CN+ EDFL K
Sbjct: 979 AGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIM----KCNLGSPEDFLSKA 1034
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDP 792
LDPP I NA+ +L+ IGA L+E +T LG+ L L V+ + KML F + CLDP
Sbjct: 1035 LDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDP 1094
Query: 793 ALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG 852
TLA + PFT PI R A ++L SD L + A+ WK A+Q G
Sbjct: 1095 VATLAAVMTEKSPFTTPIG-----RKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEG 1149
Query: 853 ---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP------- 902
E +C + F++ + L ++++L + GF S+ R
Sbjct: 1150 GYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDWEENRASQTLPFQE 1209
Query: 903 -GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD 956
++ AVL AGLY V ++ + VETA G K ++HP S+N L
Sbjct: 1210 IALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQG-KAQVHPSSVNRDLQ----- 1263
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
++Y E R +++R T++ P P+LL +I V
Sbjct: 1264 TYGWLLYQEKVRYT-RVYLRETTLITPFPVLLFGGDIEV 1301
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 158/244 (64%), Gaps = 24/244 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 539 KAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 598
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 599 STQVPHFLLEDLLLNEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCG 657
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 658 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 703
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 704 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 763
Query: 389 EDVL 392
ED++
Sbjct: 764 EDIV 767
>gi|125548350|gb|EAY94172.1| hypothetical protein OsI_15944 [Oryza sativa Indica Group]
Length = 1439
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 271/523 (51%), Gaps = 76/523 (14%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
++ L +N ++ID L+E L+ I + GA+LVFLPG +I+ DRL A+ F S
Sbjct: 864 NQNLKRLNEDVIDFDLLEDLICYIDENCPPGAVLVFLPGVAEIDMLIDRLSASVRFGRES 923
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
I+PLHS++ Q+KVF+ PP RKII++T+IAET+ITIDDV+YV+D+G+ KE Y
Sbjct: 924 SDWILPLHSLLAPTDQRKVFQSPPENIRKIIVATDIAETSITIDDVIYVVDTGKHKENRY 983
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD-FQVPEIKRIPI 710
+P +S++ W+S+A+AKQR GRAGR + G+C+ LY++ R + FQVPE+ R+P+
Sbjct: 984 NPQKKMSSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFEKMMRPFQVPEMLRMPL 1043
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
ELCLQ+K L I+ FL K ++PP I +AI +L +GA E+++ LG L
Sbjct: 1044 TELCLQIKSLHLG-GIKSFLLKAIEPPKEEAISSAIDLLYQVGAFEGHEELSPLGYHLAK 1102
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL----- 825
L V L+ KM+ + + CL P L++A Y+ PF P +EK+ AK L
Sbjct: 1103 LPVDVLIGKMMLYGAIFGCLSPILSVAAFLSYKSPFISP--KDEKQNVEKAKASLMNENL 1160
Query: 826 ----ASLYGGQSDQLAVIAAFECW-----KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
++ QSD L ++ A+ W +N + + FC ++++S VM M+ MR
Sbjct: 1161 DGSASTADNKQSDHLLMVIAYNKWSRILRENGARSAHQ--FCRSFYLNSTVMYMVRDMRL 1218
Query: 877 QLQTELIKNGF--IPED----VSSCSHN----------------ARVPGIIHAVLMAGLY 914
Q T L G IP+D V N AR ++ +V+ AGLY
Sbjct: 1219 QYGTLLADIGLLDIPKDSLRPVDGMRKNTLESWFANMSLPFNLYARYSSVVKSVICAGLY 1278
Query: 915 PMVA----------------------RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSF 952
P VA + RP +GRR +V +HP S+N L
Sbjct: 1279 PNVAATLEGVDPGALGGRKPSDFLSGKDRPRWYDGRR--------EVHIHPSSMNHSL-- 1328
Query: 953 KKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
K P +V+ E + +R+ +V+ P LLL + +
Sbjct: 1329 -KAGQYPFLVFLEKVE-TSKVFLRDTSVISPYSLLLFGGTMVI 1369
Score = 196 bits (497), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 147/229 (64%), Gaps = 25/229 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK- 232
K ++ +++E R+ LPIS FKD + N V+++ GETGCGKTTQVPQF+L+ +
Sbjct: 575 KQSSYLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDMIESE 634
Query: 233 -GETCKIVCTQPRRISATSVAERISVERGENIGDN----IGYKIRLESKGGKHSSIVFCT 287
G C IVCTQPRRI+A SVAER+S ER E+ + +GY++RL+S + + ++FCT
Sbjct: 635 LGGYCSIVCTQPRRIAAISVAERVSSERCESSPGSKDSLVGYQVRLDSARNERTKLLFCT 694
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L +D+S +TH++VDE+HER DF+L +++ ++
Sbjct: 695 TGILLRKL--------------SGNNDLSDVTHVVVDEVHERTILGDFLLIVLKSLVEKR 740
Query: 348 PH-----LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+ L++ILMSAT+D+ F++YFG CPVI V G T+PV S +LEDV
Sbjct: 741 SNQPGRKLKVILMSATVDSSLFARYFGDCPVINVEGRTHPVSSHFLEDV 789
>gi|33440541|gb|AAH56219.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Homo sapiens]
Length = 1369
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 840 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 898
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 899 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 958
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 959 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1018
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1019 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1074
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1075 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM-- 1130
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1131 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1189
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1190 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1249
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1250 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1302
Query: 994 AV 995
V
Sbjct: 1303 EV 1304
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 154/237 (64%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 549 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 608
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQ RRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 609 LLEDLLLNEW-EASKCNIVCTQHRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 667
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 668 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 713
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 714 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 770
>gi|25989134|gb|AAK64516.1| nucleic acid helicase DDXx [Homo sapiens]
Length = 1369
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 840 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 898
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 899 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 958
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 959 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1018
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1019 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1074
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1075 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM-- 1130
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1131 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1189
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1190 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1249
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1250 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1302
Query: 994 AV 995
V
Sbjct: 1303 EV 1304
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 549 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 608
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 609 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 667
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 668 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 713
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 714 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 770
>gi|67782362|ref|NP_061903.2| ATP-dependent RNA helicase DHX29 [Homo sapiens]
gi|110278938|sp|Q7Z478.2|DHX29_HUMAN RecName: Full=ATP-dependent RNA helicase DHX29; AltName: Full=DEAH
box protein 29; AltName: Full=Nucleic acid helicase DDXx
gi|119575312|gb|EAW54917.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29, isoform CRA_c [Homo
sapiens]
gi|307686369|dbj|BAJ21115.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [synthetic construct]
Length = 1369
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 840 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 898
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 899 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 958
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 959 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1018
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1019 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1074
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1075 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM-- 1130
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1131 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1189
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1190 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1249
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1250 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1302
Query: 994 AV 995
V
Sbjct: 1303 EV 1304
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 549 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 608
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 609 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 667
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 668 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 713
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 714 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 770
>gi|351714362|gb|EHB17281.1| ATP-dependent RNA helicase DHX29, partial [Heterocephalus glaber]
Length = 1354
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 265/485 (54%), Gaps = 47/485 (9%)
Query: 538 VNPELIDLVLIEQLLRKICMD------SEDGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+NP I+L LI +LL + +D S +GA+L+FLPG I + D LL+N +
Sbjct: 835 MNPHKINLDLILELL--VYLDKSPQFRSIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSE 891
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 892 RYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 951
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ +S+L +++SKASA QR GRAGR + G C+ +Y++ R + ++ VPEI R+P+E
Sbjct: 952 HESSQMSSLVETFISKASALQRQGRAGRVRDGFCFRIYTRERFENFMEYSVPEILRVPLE 1011
Query: 712 ELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEK 767
ELCL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+
Sbjct: 1012 ELCLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQH 1067
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V+ + KML F + CLDP TLA + PF PI K A AK LA
Sbjct: 1068 LAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIG--RKDEADLAKSALAI 1125
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
SD L + A+ WK A+Q G E +C + F++ + L ++++L +L+K
Sbjct: 1126 ---SDSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQEL-IKLVK 1181
Query: 885 NGFIPEDVSSCSHNA---------RVPGIIHAVLMAGLYPMVARLRPPH-----KNGRRF 930
++S S + ++ AVL AGLY V ++ +
Sbjct: 1182 AAGFSSSITSTSWEGNRGSQTLSFQEIALLKAVLAAGLYDSVGKIIYTKSVDITEKLACI 1241
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
VETA G K ++HP S+N L ++Y E R G +++R T++ P P+LL
Sbjct: 1242 VETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKIRY-GRVYLRETTLITPFPVLLFG 1294
Query: 991 TEIAV 995
+I V
Sbjct: 1295 GDIEV 1299
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 159/245 (64%), Gaps = 24/245 (9%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+ AE V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG G
Sbjct: 537 ANAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 596
Query: 217 KTTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--I 267
K+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N
Sbjct: 597 KSTQVPHFLLEDLLLNEWGTSK-CSIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLC 655
Query: 268 GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
GY+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+H
Sbjct: 656 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVH 701
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ER SDF+L+I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+
Sbjct: 702 ERSVQSDFLLSILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 761
Query: 388 LEDVL 392
LED++
Sbjct: 762 LEDII 766
>gi|194223883|ref|XP_001916425.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX29-like
[Equus caballus]
Length = 1368
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/482 (37%), Positives = 257/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F + ++
Sbjct: 838 MNPHKINLDLILELLTYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFF-SERY 896
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 897 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 956
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R D+ VPEI R+P+EEL
Sbjct: 957 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEEL 1016
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1017 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLA 1072
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1073 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1127
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1128 MADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1187
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL AGLY V ++ + VET
Sbjct: 1188 FSSSTPSNGWEGNRASQNLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACVVET 1247
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1248 AQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1300
Query: 994 AV 995
V
Sbjct: 1301 EV 1302
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 156/243 (64%), Gaps = 22/243 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 540 KAEDLEPVRNLFRKLQSTPKYQKLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 599
Query: 218 TTQVPQFLLEHIWSK---GETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGY 269
+TQVP FLLE + C IVCTQPRRISA S+A R+ E G EN G N GY
Sbjct: 600 STQVPHFLLEDLLLNECGTSKCNIVCTQPRRISAVSLATRVCEELGCENGPGGRNSLCGY 659
Query: 270 KIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHER 329
+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HER
Sbjct: 660 QIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTHVSHVIVDEVHER 705
Query: 330 DRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LE
Sbjct: 706 SVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSMYFTHCPILRISGRSYPVEVFHLE 765
Query: 390 DVL 392
D++
Sbjct: 766 DII 768
>gi|397514269|ref|XP_003827414.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Pan paniscus]
Length = 1373
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/482 (37%), Positives = 259/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 844 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 902
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 903 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 962
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 963 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1022
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1023 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1078
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1079 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1133
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1134 MADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1193
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1194 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1253
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1254 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1306
Query: 994 AV 995
V
Sbjct: 1307 EV 1308
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 553 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 612
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 613 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 671
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 672 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 717
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 718 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 774
>gi|114600256|ref|XP_001147019.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform 7 [Pan
troglodytes]
gi|410210530|gb|JAA02484.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Pan troglodytes]
gi|410251580|gb|JAA13757.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Pan troglodytes]
gi|410354593|gb|JAA43900.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Pan troglodytes]
Length = 1371
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/482 (37%), Positives = 259/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 842 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 900
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 901 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 960
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 961 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1020
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1021 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1076
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1077 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1131
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1132 MADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1191
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1192 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1251
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1252 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1304
Query: 994 AV 995
V
Sbjct: 1305 EV 1306
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 551 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 610
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 611 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 669
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 670 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 715
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 716 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 772
>gi|332233569|ref|XP_003265976.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Nomascus leucogenys]
Length = 1369
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 840 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 898
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 899 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 958
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 959 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1018
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1019 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1074
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1075 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM-- 1130
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1131 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1189
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1190 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1249
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1250 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1302
Query: 994 AV 995
V
Sbjct: 1303 EV 1304
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 549 VRNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 608
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W K C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 609 LLEDLLLNEW-KASKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMES 667
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 668 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 713
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 714 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 770
>gi|410302152|gb|JAA29676.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Pan troglodytes]
Length = 1370
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 179/482 (37%), Positives = 259/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 841 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 899
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 900 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 959
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 960 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1019
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1020 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1075
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1076 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1130
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1131 MADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1190
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1191 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1250
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1251 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1303
Query: 994 AV 995
V
Sbjct: 1304 EV 1305
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 154/237 (64%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+ QVP F
Sbjct: 550 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSNQVPHF 609
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 610 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 668
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 669 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 714
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 715 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 771
>gi|298712532|emb|CBJ26800.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1386
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 197/637 (30%), Positives = 299/637 (46%), Gaps = 120/637 (18%)
Query: 507 QPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILV 566
+P + +I K++ SD++ Q LL V+ +I+ I LL I + E+GAILV
Sbjct: 577 RPTIGEIKKRYA--GFSDNVHQSLL-----VVDESVINYEAISSLLEYITHNFEEGAILV 629
Query: 567 FLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTN 626
FLPG +I K + L NP F D K + PLH + + QK +F+ PP G RKI++STN
Sbjct: 630 FLPGLAEITKMLEALAGNPLFNDKEKTRVYPLHGSLSTSDQKAIFEVPPKGVRKIVVSTN 689
Query: 627 IAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICY 686
IAET+ITI+D V+V+DS R+KE +D N + L WVSKASAKQR GRAGR + G+C+
Sbjct: 690 IAETSITIEDCVFVVDSCRVKENRFDDANMMPMLLECWVSKASAKQRRGRAGRVRPGVCF 749
Query: 687 HLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNA 745
H+ S ++ +FQ+PE+ R+ ++++ LQ+ LLD + +FL ++PP + + N+
Sbjct: 750 HMCSSGTFQDTISEFQLPEMLRVSLDDMVLQILLLDKG-DPAEFLASAVNPPTELAVSNS 808
Query: 746 IIVLQDIGALSLDEK----VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASD 801
I L ++ A LDE +T LG L L V P + KM+ + + C++PA+T+A A
Sbjct: 809 IKYLCELQATQLDEDDKPVLTALGFHLATLPVEPRVGKMMLYGAIFGCVEPAITIAAAMS 868
Query: 802 YRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA--WFCS 859
R+PF P + F LA SD L ++ A++ W+ A+ G A +
Sbjct: 869 CRNPFVAPFDKRDIADEARRTFALA-----LSDHLTLLKAYDGWRLARGCGSRAEREYIR 923
Query: 860 QYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV-----------------SSCSHNARVP 902
+F+S + M+ MR+Q + L GFI H++ V
Sbjct: 924 DHFLSRQTLVMVEDMRRQFRGLLRDIGFIESGGSGGGGNRHSRGSHSGHPQQLEHSSNVN 983
Query: 903 G----IIHAVLMAGLYPMV----ARLRPPHKNGRRFV-----------------ETAGGA 937
G +I AV+ AGLYP V A L P + +TAG
Sbjct: 984 GGNIQLIKAVVCAGLYPNVTVAPAALCPSSTSASGGGSGGKKPGGGGSKGGAAEKTAGEV 1043
Query: 938 KVR-------LHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
++ LHP ++NF KK D VY E+ + +++R+ T V PL L L
Sbjct: 1044 SLQGRKGAMYLHPMTVNFD---KKALDSRYGVYHEVVK-TSKVYIRDMTTVTPLMLALFG 1099
Query: 991 TEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVV 1050
+ V H E +
Sbjct: 1100 GSLQV---------------------------------------HHER--------QAIT 1112
Query: 1051 VDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQK 1087
VD+WL+F + + LR + +L K+THPQ+
Sbjct: 1113 VDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQE 1149
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 151/232 (65%), Gaps = 19/232 (8%)
Query: 166 ESLTSRIEKDANLR---QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVP 222
+SL +K R ++ +RSKLP +D I TV + QVV++SGETGCGKTTQVP
Sbjct: 246 DSLFKEFDKKTRTRPYQDMLAKRSKLPAYEMRDHIVRTVRNAQVVVVSGETGCGKTTQVP 305
Query: 223 QFLLEHIW--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH 280
Q +L+ + +G + I+ TQPRRISA VAERI+ ER E IG+ GY+IRLESK K
Sbjct: 306 QLVLDTMIMEKEGASANIIVTQPRRISAVGVAERIAAERAERIGETAGYQIRLESKRSKA 365
Query: 281 SSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII 340
+ ++ CT G+LLR L +++++H+ VDE+HERD +DF+L I+
Sbjct: 366 TRLLLCTTGILLRRL--------------QVDPWLASVSHVFVDEVHERDLDTDFLLIIL 411
Query: 341 RDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+ +L P L+L+LMSATL+AD FS +FGG PV+++PG +PV F+LEDVL
Sbjct: 412 KGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVL 463
>gi|395818814|ref|XP_003782810.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Otolemur garnettii]
Length = 1368
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 181/482 (37%), Positives = 263/482 (54%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 838 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 896
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 897 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 956
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 957 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1016
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1017 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1072
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1073 ALPVNVKIGKMLIFGAVFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM-- 1128
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1129 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1187
Query: 887 FI--------PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F + +S + + + ++ AVL+AGLY V ++ + VET
Sbjct: 1188 FSSSTTSTSWERNGASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1247
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1248 AQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRY-ARVYLRETTLITPFPVLLFGGDI 1300
Query: 994 AV 995
V
Sbjct: 1301 EV 1302
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 159/245 (64%), Gaps = 24/245 (9%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+ AE V +L ++++ +++++ER +LP+ +D I T+ ++VV+++GETG G
Sbjct: 539 ANAEDLEPVRNLFRKLQRTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 598
Query: 217 KTTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--I 267
K+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N
Sbjct: 599 KSTQVPHFLLEDLLLNEWGASK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLC 657
Query: 268 GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
GY+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+H
Sbjct: 658 GYQIRMESRACESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVH 703
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ER SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+
Sbjct: 704 ERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFAHCPILRISGRSYPVEVFH 763
Query: 388 LEDVL 392
LED++
Sbjct: 764 LEDII 768
>gi|426384725|ref|XP_004058905.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Gorilla gorilla gorilla]
Length = 1326
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 797 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 855
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 856 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 915
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 916 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 975
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 976 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1031
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1032 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM-- 1087
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1088 -ADSDHLMIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1146
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1147 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1206
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1207 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1259
Query: 994 AV 995
V
Sbjct: 1260 EV 1261
Score = 193 bits (491), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 506 VRNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 565
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 566 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 624
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 625 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 670
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 671 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 727
>gi|329663671|ref|NP_001193063.1| ATP-dependent RNA helicase DHX29 [Bos taurus]
gi|296475799|tpg|DAA17914.1| TPA: DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Bos taurus]
Length = 1366
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 256/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F + ++
Sbjct: 836 MNPHKINLDLILELLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFF-SERY 894
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 895 KVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 954
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 955 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1014
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1015 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1070
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PF PI R A ++L
Sbjct: 1071 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIG-----RKDEADLAKSALA 1125
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1126 MADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAG 1185
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F+ S+ R ++ AVL AGLY V ++ + VET
Sbjct: 1186 FLSSTTSNSFEGNRATQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVET 1245
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1246 AQG-KAQVHPSSVNRDLQI-----YGWLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1298
Query: 994 AV 995
V
Sbjct: 1299 EV 1300
Score = 189 bits (480), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 155/244 (63%), Gaps = 24/244 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
K E V +L +++ +++++ER +LP+ + + T+ ++VV+++GETG GK
Sbjct: 538 KVEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGK 597
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 598 STQVPHFLLEDLLLNEWGTTK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCG 656
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 657 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 702
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D ++FS YF CP++++ G +YPV+ F+L
Sbjct: 703 RSVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFHL 762
Query: 389 EDVL 392
ED++
Sbjct: 763 EDII 766
>gi|390354905|ref|XP_787344.2| PREDICTED: ATP-dependent RNA helicase DHX29-like
[Strongylocentrotus purpuratus]
Length = 932
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 273/511 (53%), Gaps = 65/511 (12%)
Query: 535 LATVNPELIDLVLIEQLLRKI----CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDT 590
+ +NP+ I++ LI +LL + S GA+L+F+PG I + + L A+P F T
Sbjct: 371 ITRLNPDTINMDLIVELLSYLEQVPTFKSVQGAVLIFMPGLAQIQQLYEMLQADPNFSKT 430
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++ ++ LHS++ S Q F PPPG RKI+++TNIAET ITI DVV+VID+G++KE
Sbjct: 431 DRYTLLALHSVLSSDDQSAAFGIPPPGVRKIVIATNIAETGITIPDVVFVIDAGKVKENR 490
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
Y+ + +S+L+ +VSKASAKQR GRAGR + G C+ LY++ R L F PEI+R+ +
Sbjct: 491 YNERSQMSSLEEMYVSKASAKQRQGRAGRVREGFCFRLYTKQRYDVLRSFTQPEIQRVAL 550
Query: 711 EELCLQVKLLDPNC---NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGE 766
EELCL + C N EDFLQ+ LDPP+ +R ++ +L+++GA D +T LG+
Sbjct: 551 EELCLHIM----KCSLGNPEDFLQEALDPPLPQAVRASMSLLREVGACLADTPTLTPLGQ 606
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L V+ + KML FA + CL+P +A A + PF +P+ ++ +A AAK +A
Sbjct: 607 HLAALPVNVRIGKMLLFAAIFGCLEPVAVIASAMTDKPPFLVPL--GKRSQADAAKRSMA 664
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
SD + + AF WK A+ +G+ E+ FC F++ + + +++ L +
Sbjct: 665 V---ANSDHITIYKAFSGWKEARSKGRSAESRFCHGNFLNRTALLNMENVKRDLMQLVRS 721
Query: 885 NGFIP---EDVSSCSHNARVP-------------------------------GIIHAVLM 910
GFIP + S+ + +A+ P ++ +VL
Sbjct: 722 IGFIPSPTNNKSASNASAKQPSLSTKMEVLEISKTESLYGYKDAFPLTASNTALLKSVLT 781
Query: 911 AGLYPMVARLR---PPH-KNGRRFVETAGGAK--VRLHPHSLNFKLSFKKTDDCPLMVYD 964
AG+YP VA+ P H V A K V +HP S+N L M++
Sbjct: 782 AGMYPNVAKTTYDAPAHGMKDDEIVCRADTTKGPVTVHPSSVNRHLGTNG-----WMLFS 836
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
E + +++R +++ P PLLL EIAV
Sbjct: 837 ERVKL-SRVYIRESSLITPYPLLLFGGEIAV 866
Score = 196 bits (498), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 107/257 (41%), Positives = 162/257 (63%), Gaps = 24/257 (9%)
Query: 145 GKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ---IVEERSKLPISSFKDVITSTV 201
++D+ +P K + +L + +EK++N Q ++E+R LP+ +D + +
Sbjct: 60 ANKMDVKIRPNQGKGPLVTN-RTLKTILEKNSNTTQHGRLLEKRKTLPVFQHRDQVLERI 118
Query: 202 DSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCTQPRRISATSVAERISVER 259
+ +V+++GETG GK+TQ+PQFLLE + +G + IVCTQPRRISATS+A+R+S E
Sbjct: 119 YKDSIVIVAGETGSGKSTQIPQFLLEDLVLSGRGGSGSIVCTQPRRISATSLAKRVSQEL 178
Query: 260 GE---NIGDNI-GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDV 315
GE D++ GY+IRLESK + +++CT GVLLR L P+ D+
Sbjct: 179 GEPGPGHRDSLCGYQIRLESKQTSTTRLLYCTTGVLLRKL-----------QLDPSLKDI 227
Query: 316 SALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQ 375
S HII+DE+HER SDF++ I+R ++ L+LILMSATLD+ + S YF CPVI
Sbjct: 228 S---HIIIDEVHERSVQSDFLMIIVRKLVQQRSDLKLILMSATLDSQKLSAYFYHCPVIN 284
Query: 376 VPGFTYPVKSFYLEDVL 392
+PG T+PV+ ++LEDV+
Sbjct: 285 IPGRTFPVQVYHLEDVV 301
>gi|356511271|ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 1180
Score = 273 bits (699), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 283/500 (56%), Gaps = 24/500 (4%)
Query: 505 ENQPEVAQIIKKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICM 557
+ Q + + K H+ +A+ D+++ Y L+ P+ I LIE +L I
Sbjct: 499 QKQAQAFRKRKSHIASAVEDALEVAEFKGYSLRTQDSLSCWYPDSIGFNLIEHVLCHIVK 558
Query: 558 DSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPG 617
+ GA+LVF+ GW+DI +D+L A+P D S+ +++ H + S +Q+ +F+ P G
Sbjct: 559 NERSGAVLVFMTGWDDITSLKDQLQAHPLLGDQSRVLLLACHGSMASSEQRLIFENPEGG 618
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD NN L SW+SKA+A+QR GRA
Sbjct: 619 VRKIVLATNMAETSITINDVVFVVDIGKAKETSYDALNNTPCLLPSWISKAAARQRRGRA 678
Query: 678 GRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
GR Q G CYHLY + + D+Q+PE+ R P++ LCLQ+K L +I +FL + L PP
Sbjct: 679 GRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKTLQLG-SISEFLSRALQPP 737
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
++++NAI L+ IGAL +E +T LG KL L V P + KML + CLDP +T+
Sbjct: 738 EPLSVQNAIEYLKIIGALDENENLTVLGHKLAMLPVEPKLGKMLILGAIFKCLDPIMTIV 797
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF 857
RDPF +P ++K A +AK + A+ SD LA+I A++ W++A+ + +
Sbjct: 798 AGLSVRDPFVMP--SDKKDLAESAKAQFAA--RDYSDHLALIRAYDGWRDAEAQQAGYEY 853
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
C + F+SS + + +RKQ L + + + + + ++ AV+ AGL+P +
Sbjct: 854 CWRNFLSSQTLRAIDSLRKQFFYLLKDICLVNNNSETYNTWSHEEHLLRAVICAGLFPGI 913
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNF---KLSFKKTDDCPLMVYDEITRGDGGMH 974
+ + +K+ ++T +V L+ S+N ++ F P +V++E + + +
Sbjct: 914 SSV--VNKDKSIALKTMEDGQVLLYSSSVNGCVPRIPF------PWLVFNEKVKVN-SVF 964
Query: 975 VRNCTVVGPLPLLLLATEIA 994
+R+ T + LLL ++
Sbjct: 965 LRDSTGISDSVLLLFGGNVS 984
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 151/216 (69%), Gaps = 16/216 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
++++E R LP KD + +QVV++SGETGCGKTTQ+PQ++LE ++G C
Sbjct: 273 QKMLEFRRSLPAFKEKDAFLRVISQSQVVVVSGETGCGKTTQLPQYILESEIEAARGAVC 332
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT GVLLR L+
Sbjct: 333 NIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLL 392
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L +++++L P LRLILMS
Sbjct: 393 ---VDR-----------NLKGVTHVIVDEIHERGMNEDFLLIVLKELLHHRPDLRLILMS 438
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ATL+A+ FS YF G P + +PGFT+PV++ +LED+L
Sbjct: 439 ATLNAELFSSYFNGAPTMHIPGFTFPVRAHFLEDIL 474
>gi|395735810|ref|XP_003780662.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX29
[Pongo abelii]
Length = 1324
Score = 273 bits (699), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 795 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 853
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 854 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 913
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 914 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 973
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 974 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1029
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1030 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM-- 1085
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1086 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1144
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1145 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACVVET 1204
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1205 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1257
Query: 994 AV 995
V
Sbjct: 1258 EV 1259
Score = 192 bits (489), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 504 VRNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 563
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 564 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLAGRVCDELGCENGPGGRNSLCGYQIRMES 622
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 623 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 668
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 669 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 725
>gi|440912987|gb|ELR62501.1| ATP-dependent RNA helicase DHX29 [Bos grunniens mutus]
Length = 1372
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 256/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F + ++
Sbjct: 842 MNPHKINLDLILELLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFF-SERY 900
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 901 KVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 960
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 961 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1020
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1021 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1076
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PF PI R A ++L
Sbjct: 1077 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIG-----RKDEADLAKSALA 1131
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1132 MADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAG 1191
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F+ S+ R ++ AVL AGLY V ++ + VET
Sbjct: 1192 FLSSTTSNTFEGNRATQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVET 1251
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1252 AQG-KAQVHPSSVNRDLQI-----YGWLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1304
Query: 994 AV 995
V
Sbjct: 1305 EV 1306
Score = 189 bits (480), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 155/244 (63%), Gaps = 24/244 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
K E V +L +++ +++++ER +LP+ + + T+ ++VV+++GETG GK
Sbjct: 544 KVEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGK 603
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 604 STQVPHFLLEDLLLNEWGTTK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCG 662
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 663 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 708
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D ++FS YF CP++++ G +YPV+ F+L
Sbjct: 709 RSVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFHL 768
Query: 389 EDVL 392
ED++
Sbjct: 769 EDII 772
>gi|354482597|ref|XP_003503484.1| PREDICTED: ATP-dependent RNA helicase Dhx29 [Cricetulus griseus]
Length = 1368
Score = 273 bits (698), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 259/487 (53%), Gaps = 45/487 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFR 588
L +NP I+L LI +LL + +D +GA L+FLPG I + D LL+N
Sbjct: 836 LLYMNPHKINLDLILELL--VYLDKSPQFRNIEGAALIFLPGLAHIQQLYD-LLSNDRRF 892
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
+ ++ +I LHS++ + Q F+ PPPG RKI+L+TNIAET ITI DVV+VID+GR KE
Sbjct: 893 YSERYEVIALHSVLSTQDQAAAFRLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 952
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRI 708
Y + +S+L ++VSKASA QR GRAGR + G C+ LY++ R D+ VPEI R+
Sbjct: 953 NKYHESSQMSSLVETFVSKASALQRQGRAGRIRDGFCFRLYTRERFEGFLDYSVPEILRV 1012
Query: 709 PIEELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTEL 764
P+EELCL + C++ EDFL K LDPP I NA+ +L+ IGA L+E K+T L
Sbjct: 1013 PLEELCLHIM----KCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPL 1068
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G+ L L V+ + KML F + CLDP TLA + PF PI R A
Sbjct: 1069 GQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIG-----RKDEADLA 1123
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTE 881
+SL SD L + A+ WK AKQ G E +C + F++ + L ++++L
Sbjct: 1124 KSSLAVADSDHLTIYNAYLGWKKAKQEGGYRSEITYCQRNFLNRTSLLTLEDVKQELMKL 1183
Query: 882 LIKNGFIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGR 928
+ GF S+ + ++ AVL AGLY V ++ +
Sbjct: 1184 VKAAGFSSSTTSTSWEGKKASQTLSFQDIALLKAVLAAGLYDSVGKIMYTKSVDVTEKLA 1243
Query: 929 RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
VETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1244 CMVETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRY-ARVYLRETTLITPFPVLL 1296
Query: 989 LATEIAV 995
+I V
Sbjct: 1297 FGGDIEV 1303
Score = 192 bits (489), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 160/244 (65%), Gaps = 22/244 (9%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+ AE +++L +++ +++++ER +LP+ +D+I T+ ++VV+++GETG G
Sbjct: 540 TNAEDLEPIKNLFRKLQSTPKYQRLLKERQQLPVFKHRDLIVETLKRHRVVVVAGETGSG 599
Query: 217 KTTQVPQFLLEHIWSK---GETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
K+TQVP FLLE + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 600 KSTQVPHFLLEDLLLNECGARKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCG 659
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR +L+E S ++ ++H+IVDE+HE
Sbjct: 660 YQIRMESRASESTRLLYCTTGVLLR--------KLQEDSL------LTDVSHVIVDEVHE 705
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+D+FS YF CP++++ G +YPV+ F+L
Sbjct: 706 RSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHL 765
Query: 389 EDVL 392
ED++
Sbjct: 766 EDII 769
>gi|195133600|ref|XP_002011227.1| GI16119 [Drosophila mojavensis]
gi|193907202|gb|EDW06069.1| GI16119 [Drosophila mojavensis]
Length = 1290
Score = 273 bits (697), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 269/502 (53%), Gaps = 56/502 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFR 588
K + + P +I+ LIE +L+ I +G+IL+FLPG++DI + L +
Sbjct: 723 KSIYLMEPMMINPDLIESVLKYIVEGDHHWPREGSILIFLPGFQDIQAVLNALQDSAVGP 782
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
+ K+++IPLHS + S Q VFKR PPG RKI+LSTNIAET++TIDD V+VID G MKE
Sbjct: 783 RSGKYLLIPLHSALSSEDQALVFKRAPPGKRKIVLSTNIAETSVTIDDCVFVIDCGLMKE 842
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKR 707
K +D N+ +L WVS+A+AKQR GRAGR G+C HLY++ R Q VPEI+R
Sbjct: 843 KGFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTRYRYEHHILAQPVPEIQR 902
Query: 708 IPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELG 765
+P+E++ L++K L + N L +TLD P +++ A++ L+D+GAL +D+++T LG
Sbjct: 903 VPLEQIVLRIKTLSMFASRNTLSVLLETLDAPKEDSVQGALMRLRDVGALDIDDQLTPLG 962
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
L L V + K++ + + CLD LT+A + PF P++ ++ +F L
Sbjct: 963 HHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFISPLNKRDEADKRKRQFAL 1022
Query: 826 ASLYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTEL 882
SD L V+ A+ W +RG + S ++S + M+ ++ Q L
Sbjct: 1023 -----DHSDHLTVLNAYRKWLAVAKRGHYGASRNYASTNYLSINTLEMIADLKYQYLELL 1077
Query: 883 IKNGFIPEDVSS------------CSHNARVPG----IIHAVLMAGLYPMVARLRPPHKN 926
+ GF+P +V H V G ++ ++L A LYP + ++ P
Sbjct: 1078 VSIGFVPVNVPRRRPNSSDNVLQLTGHEQNVNGENNRLLTSLLCAALYPNIVKIMTP--- 1134
Query: 927 GRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITR 968
R +++TAGGA VR+HP S+N +++ + P +VY E
Sbjct: 1135 DRVYIQTAGGAVPREPGHQDLRFKTRGDGYVRIHPSSVNSQVAVFQA---PFLVYQEKV- 1190
Query: 969 GDGGMHVRNCTVVGPLPLLLLA 990
+++R+C+++ + L+L A
Sbjct: 1191 CTSSIYIRDCSMLPLIALVLFA 1212
Score = 199 bits (507), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 147/221 (66%), Gaps = 26/221 (11%)
Query: 182 VEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK---- 237
+E R KLP + + I + + SNQVV+ISGETGCGK+TQVPQF+L+ + + CK
Sbjct: 451 IEGRRKLPAFAEIERIMALIRSNQVVVISGETGCGKSTQVPQFILDDWFFQA--CKSTSE 508
Query: 238 ------IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVL 291
I+CTQPRR+SA VAER++ ER + IG +GY+IRLE+K + + + FCT G+L
Sbjct: 509 DMPHVEIICTQPRRLSAIGVAERVAAERVDRIGRLVGYQIRLENKISESTRLTFCTTGIL 568
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
LR L S+ P +VS H+IVDE+HER + SDF+L I++++L L+
Sbjct: 569 LRRL-----------SSDPLLTNVS---HVIVDEVHERSQDSDFLLLILKNILRERKDLK 614
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+ILMSATL+A FS YFGG PV+ +PG T+PV+ +LED+L
Sbjct: 615 VILMSATLNASLFSNYFGGAPVLDIPGRTFPVEQLFLEDIL 655
>gi|403267580|ref|XP_003925901.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Saimiri boliviensis
boliviensis]
Length = 1366
Score = 273 bits (697), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 837 MNPYKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 895
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 896 RVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 955
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 956 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1015
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1016 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRRIGACELNEPKLTPLGQHLA 1071
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1072 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAV-- 1127
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1128 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1186
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1187 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1246
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1247 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1299
Query: 994 AV 995
V
Sbjct: 1300 EV 1301
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 546 VRNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 605
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 606 LLEDLLLNEWGASK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMES 664
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 665 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 710
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 711 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 767
>gi|432885031|ref|XP_004074623.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Oryzias latipes]
Length = 1379
Score = 273 bits (697), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 261/481 (54%), Gaps = 36/481 (7%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L +NP I++ L+ +LL + + DGAILVFLPG I + D L +N FR+
Sbjct: 847 LQYMNPNKINMDLLVELLDYLDKSPQFADVDGAILVFLPGLAHIQQLYDLLSSNKRFREK 906
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
S++ I+ LHS + S Q F PP G RKI+LSTNIAET +TI DVV+VID+G+ KE
Sbjct: 907 SRYRIVALHSTLSSKDQAAAFTVPPAGVRKIVLSTNIAETGVTIPDVVFVIDTGKTKENK 966
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
Y + +S+L ++VSKASA QR GRAGR ++G C+ LY + R + D+ +PEI R+P+
Sbjct: 967 YHESSQMSSLVETFVSKASALQRQGRAGRVRSGFCFRLYPKYRFDAFMDYSIPEILRVPL 1026
Query: 711 EELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-DEKVTELGE 766
EELCL + C EDFL + LDPP ++ NA+ +L+ IGA D +T LG
Sbjct: 1027 EELCLHIM----KCQYGSPEDFLSRALDPPQPQSVSNAVNLLRKIGACHPNDHTLTPLGH 1082
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L V+ + KML + ++ CL+P T+A A + PF+ P+ N K+ A AK A
Sbjct: 1083 HLASLPVNVKIGKMLIYGAILGCLEPIATIAAAMTEKSPFSTPM--NRKEEANLAK---A 1137
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
+L SD L + A+ WK + G E +C ++F++ + + ++ L + +
Sbjct: 1138 ALAVANSDHLTIYNAYLGWKTVQTEGLKAEMSYCRKHFLNRTALITMEDVKHDLTKMMEQ 1197
Query: 885 NGFIPEDVSSCSHNA-----RVPGIIHAVLMAGLYPMVARL--RPPHKNGRRF---VETA 934
GF S A + +++A L AGLY VA + P + VET
Sbjct: 1198 VGFWSSRPSRVKQQAASLSKQQISVLNAALTAGLYDSVAPILCTPSVDVLEQIACTVETP 1257
Query: 935 GGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
G K ++HP S+N L ++Y E + G +++R+ T++ P P+LL +I
Sbjct: 1258 QG-KAQVHPSSVNRSLQTHG-----WLLYQEKVKY-GKIYLRDTTLISPFPMLLFGGDID 1310
Query: 995 V 995
+
Sbjct: 1311 I 1311
Score = 186 bits (472), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 157/266 (59%), Gaps = 34/266 (12%)
Query: 135 NQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFK 194
++++KS TRG + ++ + ++ L S+++ ER +LP+ +
Sbjct: 540 DKNKKSPGTRGGEAGLHAARELL---LGLRKSPLASKLQA---------EREQLPVFQHR 587
Query: 195 DVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET---CKIVCTQPRRISATSV 251
I + + VV+++GETG GK+TQ+PQFLL + + G+T C IV TQPRRISA S+
Sbjct: 588 HQILEALQRHPVVVVAGETGSGKSTQIPQFLLGELLTGGKTAQPCNIVVTQPRRISAMSL 647
Query: 252 AERISVERGENIGDN-----IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEA 306
A R+S E G G GY+IR+E++ G + +++CT GVLLR L
Sbjct: 648 ACRVSQELGCEDGPGSKSSLCGYQIRMENQSGDWTRLLYCTTGVLLRKLQHD-------- 699
Query: 307 SNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQ 366
+S+LTHIIVDE+HER SDF+L I++D++ L LILMSAT+D +FS
Sbjct: 700 ------RQLSSLTHIIVDEVHERSVQSDFLLTILKDVVMRRSDLHLILMSATVDCHKFSS 753
Query: 367 YFGGCPVIQVPGFTYPVKSFYLEDVL 392
YF CPVI +PG T+PV+ ++LED++
Sbjct: 754 YFNRCPVINIPGRTFPVEVYHLEDIV 779
>gi|344240842|gb|EGV96945.1| ATP-dependent RNA helicase Dhx29 [Cricetulus griseus]
Length = 1371
Score = 273 bits (697), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 259/487 (53%), Gaps = 45/487 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFR 588
L +NP I+L LI +LL + +D +GA L+FLPG I + D LL+N
Sbjct: 836 LLYMNPHKINLDLILELL--VYLDKSPQFRNIEGAALIFLPGLAHIQQLYD-LLSNDRRF 892
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
+ ++ +I LHS++ + Q F+ PPPG RKI+L+TNIAET ITI DVV+VID+GR KE
Sbjct: 893 YSERYEVIALHSVLSTQDQAAAFRLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 952
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRI 708
Y + +S+L ++VSKASA QR GRAGR + G C+ LY++ R D+ VPEI R+
Sbjct: 953 NKYHESSQMSSLVETFVSKASALQRQGRAGRIRDGFCFRLYTRERFEGFLDYSVPEILRV 1012
Query: 709 PIEELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTEL 764
P+EELCL + C++ EDFL K LDPP I NA+ +L+ IGA L+E K+T L
Sbjct: 1013 PLEELCLHIM----KCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPL 1068
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G+ L L V+ + KML F + CLDP TLA + PF PI R A
Sbjct: 1069 GQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIG-----RKDEADLA 1123
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTE 881
+SL SD L + A+ WK AKQ G E +C + F++ + L ++++L
Sbjct: 1124 KSSLAVADSDHLTIYNAYLGWKKAKQEGGYRSEITYCQRNFLNRTSLLTLEDVKQELMKL 1183
Query: 882 LIKNGFIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGR 928
+ GF S+ + ++ AVL AGLY V ++ +
Sbjct: 1184 VKAAGFSSSTTSTSWEGKKASQTLSFQDIALLKAVLAAGLYDSVGKIMYTKSVDVTEKLA 1243
Query: 929 RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
VETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1244 CMVETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRY-ARVYLRETTLITPFPVLL 1296
Query: 989 LATEIAV 995
+I V
Sbjct: 1297 FGGDIEV 1303
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 160/244 (65%), Gaps = 22/244 (9%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+ AE +++L +++ +++++ER +LP+ +D+I T+ ++VV+++GETG G
Sbjct: 540 TNAEDLEPIKNLFRKLQSTPKYQRLLKERQQLPVFKHRDLIVETLKRHRVVVVAGETGSG 599
Query: 217 KTTQVPQFLLEHIWSK---GETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
K+TQVP FLLE + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 600 KSTQVPHFLLEDLLLNECGARKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCG 659
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR +L+E S ++ ++H+IVDE+HE
Sbjct: 660 YQIRMESRASESTRLLYCTTGVLLR--------KLQEDSL------LTDVSHVIVDEVHE 705
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+D+FS YF CP++++ G +YPV+ F+L
Sbjct: 706 RSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHL 765
Query: 389 EDVL 392
ED++
Sbjct: 766 EDII 769
>gi|47219913|emb|CAF97183.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1337
Score = 272 bits (696), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 251/452 (55%), Gaps = 33/452 (7%)
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
DGA+LVFLPG I + D L ++ FRD ++F I+ LHS + S Q F PP G RK
Sbjct: 828 DGAVLVFLPGLAHIQQLYDLLCSDKRFRDKNRFRIVALHSTLSSKDQAAAFTVPPAGVRK 887
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
I+LSTNIAET +TI DVV+VID+G+ KE Y + +S+L ++VSKASA QR GRAGR
Sbjct: 888 IVLSTNIAETGVTIPDVVFVIDTGKTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 947
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI---EDFLQKTLDPP 737
+ G C+ LY + R + D+ +PEI R+P+EELCL + C EDFL + +DPP
Sbjct: 948 KNGFCFRLYPKYRFDAFMDYSIPEILRVPLEELCLHIM----KCQYGSPEDFLSRAMDPP 1003
Query: 738 VSVTIRNAIIVLQDIGALSLDEKV-TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
+I NA+ +L+ IGA E + T LG+ L L V+ + KML + ++ CL+P T+
Sbjct: 1004 QPQSISNAVSLLRKIGACHPSEHILTPLGQHLASLPVNVKIGKMLIYGAILGCLEPIATI 1063
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA- 855
A A + PF+ P+ N K+ A AK A+L SD L + +A+ WK A+ GQ A
Sbjct: 1064 AAAITEKSPFSTPM--NRKEEANLAK---ATLALANSDHLTIYSAYLGWKKAQAEGQRAD 1118
Query: 856 -WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF----IPEDVSS--CSHNARVPGIIHAV 908
+C ++F+S + + ++ +L + + GF P S +A+ ++ A
Sbjct: 1119 VSYCRKHFLSRTALITIENVKHELMKMMEQVGFRSCRSPSSAKSQPTWPSAQQAAVLKAA 1178
Query: 909 LMAGLYPMVARL--RPPHKNGRRFV---ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVY 963
L AGLY V R+ P R V ET G + ++HP S+N L ++Y
Sbjct: 1179 LTAGLYDSVGRILFTPSVDVLERVVCMAETPQG-RAQVHPSSVNRNLQTHG-----WLLY 1232
Query: 964 DEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
E + +++R+ T++ P P+LL +I V
Sbjct: 1233 QEKVKYT-KIYLRDTTLIPPFPMLLFGGDIDV 1263
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 148/242 (61%), Gaps = 25/242 (10%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L R++K +++ ER +LP+ + I + + VV+++GETG GK+TQ+PQFLLE
Sbjct: 429 LLKRLKKSPLAQKLQAEREQLPVFQHRRRILEALQRHPVVVVAGETGSGKSTQIPQFLLE 488
Query: 228 HIWSKG---ETCKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGK 279
+ + G + C IV TQPRRISA S+A R+S E G G GY+IR+E+ G+
Sbjct: 489 ELLTGGCEAKPCNIVVTQPRRISAMSLACRVSQELGCEDGPGSKSSPCGYQIRMENLSGE 548
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
+ +++CT GVLLR L Q RL S+LTH+IVDE+HER SDF+L I
Sbjct: 549 WTRLLYCTTGVLLRKL--QHDRRL------------SSLTHVIVDEVHERSVQSDFLLTI 594
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAE 399
++D++ L+LILMSAT+D +FS YF CPVI +PG T+PV+ + L +K +E
Sbjct: 595 LKDVVMRRSDLQLILMSATVDCHKFSNYFNRCPVITIPGRTFPVE---VNGALGAMKDSE 651
Query: 400 SN 401
N
Sbjct: 652 GN 653
>gi|21740289|emb|CAD39154.1| hypothetical protein [Homo sapiens]
Length = 831
Score = 272 bits (695), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 302 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 360
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 361 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 420
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 421 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 480
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 481 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 536
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 537 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPI--GRKDEADLAKSALAM-- 592
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 593 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 651
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 652 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 711
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 712 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 764
Query: 994 AV 995
V
Sbjct: 765 EV 766
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 11 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 70
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 71 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 129
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 130 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 175
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 176 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 232
>gi|301785409|ref|XP_002928124.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Ailuropoda
melanoleuca]
Length = 1358
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/484 (36%), Positives = 258/484 (53%), Gaps = 46/484 (9%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+NP I+L LI +LL I +D +GA+L+FLPG I + D L + F +
Sbjct: 829 MNPHKINLDLILELL--IYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFF-SE 885
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 886 RYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 945
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+E
Sbjct: 946 HESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLE 1005
Query: 712 ELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEK 767
ELCL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E +T LG+
Sbjct: 1006 ELCLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQH 1061
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V+ + KML F + CLDP TLA + PFT PI R A ++
Sbjct: 1062 LAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSA 1116
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
L SD L + A+ WK A+Q G E +C + F++ + L ++++L +L+K
Sbjct: 1117 LAMADSDHLTIYNAYLGWKKARQEGGYRSEVAYCRRNFLNRTSLLTLEDVKQEL-IKLVK 1175
Query: 885 NGFIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFV 931
S+ R ++ AVL AGLY V ++ + V
Sbjct: 1176 AAGFSSSTSNDWEGNRASQTLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIV 1235
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
ETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1236 ETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRYT-RVYLRETTLITPFPVLLFGG 1288
Query: 992 EIAV 995
+I V
Sbjct: 1289 DIEV 1292
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 157/244 (64%), Gaps = 24/244 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L ++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 531 KAEDLEPVRNLFRKLRSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 590
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 591 STQVPHFLLEDLLINEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCG 649
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 650 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 695
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 696 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 755
Query: 389 EDVL 392
ED++
Sbjct: 756 EDII 759
>gi|296194585|ref|XP_002745012.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Callithrix jacchus]
Length = 1367
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 180/482 (37%), Positives = 259/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 838 MNPYKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFSSERY 896
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 897 RVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 956
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 957 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1016
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1017 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRRIGACELNEPKLTPLGQHLA 1072
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1073 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAV-- 1128
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1129 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1187
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F ++ R ++ AVL+AGLY V ++ + ET
Sbjct: 1188 FSSSTTTTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACVAET 1247
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1248 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1300
Query: 994 AV 995
V
Sbjct: 1301 EV 1302
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 547 VRNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 606
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERGENIG----DNI-GYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G G D++ GY+IR+ES
Sbjct: 607 LLEDLLLNDWGASK-CNIVCTQPRRISAMSLATRVCDELGCENGPGGRDSLCGYQIRMES 665
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 666 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 711
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 712 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 768
>gi|349604078|gb|AEP99728.1| ATP-dependent RNA helicase DHX29-like protein, partial [Equus
caballus]
Length = 555
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 181/482 (37%), Positives = 257/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D L + F ++
Sbjct: 25 MNPHKINLDLILELLTYLGRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSV-RY 83
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 84 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 143
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R D+ VPEI R+P+EEL
Sbjct: 144 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEEL 203
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 204 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLA 259
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 260 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPI--GRKDEADLAKSALAM-- 315
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 316 -ADSDHLTIYNAYLGWKKARQEGGSRSEIAYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 374
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL AGLY V ++ + VET
Sbjct: 375 FSSSTPSNGWEGNRASQNLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACVVET 434
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N + ++Y E R +++R T++ P P+LL +I
Sbjct: 435 AQG-KAQVHPSSVN-----RDLQTYGWLLYQEKIR-YARVYLRETTLITPFPVLLFGGDI 487
Query: 994 AV 995
V
Sbjct: 488 EV 489
>gi|168002269|ref|XP_001753836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694812|gb|EDQ81158.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 912
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/480 (35%), Positives = 258/480 (53%), Gaps = 29/480 (6%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSED----------GAILVFLPGWEDINKTRDRLLAN 584
L V+ +I+ LIE L+ I + GAILVFLPG +I K + RL ++
Sbjct: 378 LKIVDQSIINFELIETLICSILEQEANPSTIGQKENVGAILVFLPGMLEIRKLQQRLQSS 437
Query: 585 PFFR--DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVID 642
++ LH + +QK+VFK+PP G RK++L+TNIAET+ITIDDVVYVID
Sbjct: 438 HQISALGLGGLWVLALHGSLSGEEQKRVFKKPPSGIRKVVLATNIAETSITIDDVVYVID 497
Query: 643 SGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQV 702
+GR KE YD +S L+ +W+SKA+AKQR GRAGR + G C L+S+ + + + Q+
Sbjct: 498 TGRHKEMRYDHNRGLSCLEDTWISKANAKQRRGRAGRVRPGCCLRLFSRQQFENFEEQQL 557
Query: 703 PEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
PE+ R+ +E LCL+VK L + + + + L PP +R ++ L+D+ AL E++T
Sbjct: 558 PEMLRVSLEGLCLRVKTLMEG-KVMEVVSQMLTPPSFEAVRTSLKSLEDLSALDKAERLT 616
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
LG+ L + V + KML F ++ CLDP LT+A + R PF P+ E+ A K
Sbjct: 617 PLGQHLARMPVDARVGKMLIFGCMLKCLDPILTIAASLSGRSPFMSPMERREEAAAARMK 676
Query: 823 FELASLYGGQSDQLAVIAAFECWKNAKQ--RGQEAWFCSQYFVSSGVMNMLLGMRKQLQT 880
S +SD +A+ AA+ W +AK G E +C F+S ++ + R
Sbjct: 677 LAGNS----KSDHMAIAAAYNGWTSAKNDGWGSENEYCQANFLSRETLSGIEASRTDYLK 732
Query: 881 ELIKNGFIP--EDVSSCSH---NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG 935
L+ GF+P D + H NA ++ A++ AG YP + R+ P K RF
Sbjct: 733 ILVDLGFLPTFADYNVTGHLNANANSVRVVKALICAGFYPNIVRVHHPEKTYLRFFTKED 792
Query: 936 GAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
G +V LHP S+NF + ++ P +V+ E + + +R T++ LLL EI V
Sbjct: 793 G-RVFLHPASVNFPVGIFES---PYLVFTEKVK-TSKIFLRESTMIPAYALLLFGGEIRV 847
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 141/237 (59%), Gaps = 27/237 (11%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L + KD LR + R++LP ++ + ++ + V ++ G+TGCGK+TQVPQF+LE
Sbjct: 88 LWQKSRKDQELRGV---RARLPAHKYRGDLLDAINGSFVTIVCGQTGCGKSTQVPQFVLE 144
Query: 228 HIW--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVF 285
+KG C I+CTQPRRISA +A+R+S ERG+ +G +GY +RL+S K + ++F
Sbjct: 145 DYIEKNKGGECNIICTQPRRISAIGLADRVSKERGQAVGVTVGYSVRLDSCRSKRTRLLF 204
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD---FMLAIIRD 342
CT G+LLR L+S +++ +TH+IVDE+HER SD L +
Sbjct: 205 CTTGILLRRLLSD--------------PNLTGVTHVIVDEVHERSLESDLLLLFLRQFLN 250
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGC-----PVIQVPGFTYPVKSFYLEDVLSI 394
LR+ILMSAT+DA F+ YF PV+ +PGFT+PV+ YLED L +
Sbjct: 251 RCAPQNTLRMILMSATVDAGVFANYFKKSGSYAPPVVNIPGFTFPVRELYLEDALEM 307
>gi|281337520|gb|EFB13104.1| hypothetical protein PANDA_018032 [Ailuropoda melanoleuca]
Length = 1340
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/484 (36%), Positives = 258/484 (53%), Gaps = 46/484 (9%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+NP I+L LI +LL I +D +GA+L+FLPG I + D L + F +
Sbjct: 829 MNPHKINLDLILELL--IYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFF-SE 885
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 886 RYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 945
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+E
Sbjct: 946 HESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLE 1005
Query: 712 ELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEK 767
ELCL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E +T LG+
Sbjct: 1006 ELCLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQH 1061
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V+ + KML F + CLDP TLA + PFT PI R A ++
Sbjct: 1062 LAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSA 1116
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
L SD L + A+ WK A+Q G E +C + F++ + L ++++L +L+K
Sbjct: 1117 LAMADSDHLTIYNAYLGWKKARQEGGYRSEVAYCRRNFLNRTSLLTLEDVKQEL-IKLVK 1175
Query: 885 NGFIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFV 931
S+ R ++ AVL AGLY V ++ + V
Sbjct: 1176 AAGFSSSTSNDWEGNRASQTLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIV 1235
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
ETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1236 ETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRYT-RVYLRETTLITPFPVLLFGG 1288
Query: 992 EIAV 995
+I V
Sbjct: 1289 DIEV 1292
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 157/244 (64%), Gaps = 24/244 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L ++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 531 KAEDLEPVRNLFRKLRSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 590
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 591 STQVPHFLLEDLLINEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCG 649
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 650 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 695
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 696 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 755
Query: 389 EDVL 392
ED++
Sbjct: 756 EDII 759
>gi|5102733|emb|CAB45191.1| hypothetical protein, similar to (AC007017) putative RNA helicase A
[Arabidopsis thaliana] [Homo sapiens]
Length = 809
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 280 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 338
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 339 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 398
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 399 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 458
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 459 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 514
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 515 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPI--GRKDEADLAKSALAM-- 570
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 571 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 629
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 630 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 689
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 690 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 742
Query: 994 AV 995
V
Sbjct: 743 EV 744
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 149/223 (66%), Gaps = 24/223 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI----WSKGE 234
+++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP FLLE + W +
Sbjct: 3 QKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEW-EAS 61
Query: 235 TCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLESKGGKHSSIVFCTNG 289
C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES+ + + +++CT G
Sbjct: 62 KCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTG 121
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
VLLR L G+ +S ++H+IVDE+HER SDF+L I++++L
Sbjct: 122 VLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSD 167
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 168 LHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 210
>gi|119575310|gb|EAW54915.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29, isoform CRA_a [Homo
sapiens]
Length = 733
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 181/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 204 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 262
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 263 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 322
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 323 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 382
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 383 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 438
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 439 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPI--GRKDEADLAKSALAM-- 494
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 495 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 553
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 554 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 613
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N + ++Y E R +++R T++ P P+LL +I
Sbjct: 614 AQG-KAQVHPSSVN-----RDLQTHGWLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 666
Query: 994 AV 995
V
Sbjct: 667 EV 668
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 85/125 (68%), Gaps = 14/125 (11%)
Query: 268 GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
GY+IR+ES+ + + +++CT GVLLR L G+ +S ++H+IVDE+H
Sbjct: 24 GYQIRMESRACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVH 69
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ER SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+
Sbjct: 70 ERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 129
Query: 388 LEDVL 392
LED++
Sbjct: 130 LEDII 134
>gi|109077251|ref|XP_001099143.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform 5 [Macaca
mulatta]
Length = 1367
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 258/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 838 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 896
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 897 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 956
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R ++ VPEI R+P+EEL
Sbjct: 957 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMEYSVPEILRVPLEEL 1016
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-DEKVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L D K+T LG+ L
Sbjct: 1017 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNDPKLTPLGQHLA 1072
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1073 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1127
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1128 MADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1187
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1188 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1247
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1248 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1300
Query: 994 AV 995
V
Sbjct: 1301 EV 1302
Score = 193 bits (491), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 547 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 606
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 607 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMES 665
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 666 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 711
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 712 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 768
>gi|380813930|gb|AFE78839.1| ATP-dependent RNA helicase DHX29 [Macaca mulatta]
Length = 1367
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 258/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 838 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 896
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 897 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 956
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R ++ VPEI R+P+EEL
Sbjct: 957 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMEYSVPEILRVPLEEL 1016
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-DEKVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L D K+T LG+ L
Sbjct: 1017 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNDPKLTPLGQHLA 1072
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1073 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1127
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1128 MADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1187
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1188 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1247
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1248 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1300
Query: 994 AV 995
V
Sbjct: 1301 EV 1302
Score = 193 bits (491), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 547 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 606
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 607 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMES 665
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 666 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 711
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 712 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 768
>gi|383419359|gb|AFH32893.1| ATP-dependent RNA helicase DHX29 [Macaca mulatta]
Length = 1367
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 258/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 838 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 896
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 897 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 956
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R ++ VPEI R+P+EEL
Sbjct: 957 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMEYSVPEILRVPLEEL 1016
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-DEKVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L D K+T LG+ L
Sbjct: 1017 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNDPKLTPLGQHLA 1072
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1073 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1127
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1128 MADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1187
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1188 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1247
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1248 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1300
Query: 994 AV 995
V
Sbjct: 1301 EV 1302
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 151/237 (63%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++G G GK TQ P F
Sbjct: 547 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGGKGGGKKTQGPHF 606
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 607 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMES 665
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 666 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 711
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 712 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 768
>gi|324500431|gb|ADY40204.1| ATP-dependent RNA helicase, partial [Ascaris suum]
Length = 1767
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 209/697 (29%), Positives = 342/697 (49%), Gaps = 93/697 (13%)
Query: 446 SLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQE 505
S +GS + Q P++ R+ V ++ DC + +AL
Sbjct: 708 SFDGSLQSVHQQSKNCSAQPVVAGYSLARIDQVGFRVNHQQDCNVAPL---SALPNRPTS 764
Query: 506 NQPEVAQIIKKHMENALSDSMKQQLLDKYLAT--------VNPELIDLVLIEQLLRKICM 557
+ ++++ NA S L+++YL + V+P+L V+ K CM
Sbjct: 765 FEAACVDVLRRTKLNAAS------LIEEYLNSGGQQWTDGVDPDLTVAVI------KYCM 812
Query: 558 DSE-DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
DS +G+IL+FLPG+EDI R+ ++ + K VI LHS + S Q+KVF P
Sbjct: 813 DSPINGSILIFLPGYEDILTIRESVMTE-LESCSKKPVIFTLHSQMNSQDQQKVFDPVPV 871
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
GCRK+ILSTNIAE ++TIDDVV+V+D G++KEK+YD ++ L+ +W++K++A+QRAGR
Sbjct: 872 GCRKVILSTNIAEASLTIDDVVFVVDCGKVKEKTYDHSTRINQLKMAWIAKSNAEQRAGR 931
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLD 735
AGRC+AG C+ LYS + QV E+KR I ++CL K+ P N +++ FL +
Sbjct: 932 AGRCRAGYCFRLYSVDDYDRMNPTQVAEMKRAAIHDVCLHAKMFAPENMSVKKFLSLAPE 991
Query: 736 PPVSVTIRNAIIVLQDIGALSLDEK--------------------VTELGEKLGCLSVHP 775
PP + ++ L+ +GAL D +TELG + L + P
Sbjct: 992 PPSPQAVEWSLEFLEQLGALYGDRSATAAYEGRFSVYGRERREPDLTELGRHIAQLPLEP 1051
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
++++L F I + C +P +TL A +RDPF LP+ +E+ A AA+ E SD
Sbjct: 1052 QLARLLLFGIALRCFNPVVTLVAALSHRDPFILPLG-DERAAALAARDEFGRC--DYSDH 1108
Query: 836 LAVIAAFECWKNAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
L ++ AF + GQ W FC F+S M M+ G+R+QL EL + +P S
Sbjct: 1109 LMLLRAFNAFSRLAH-GQRQWHFCKTKFLSPNTMKMIAGIRRQLLIELRRLRLLPASCHS 1167
Query: 895 CS------HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHP----- 943
++ P ++ A ++AG YP + +R N R + T+ + LHP
Sbjct: 1168 FDDPDLNRYSCNWP-MVQAAIVAGCYPGIGFVRA--GNKLRKIRTSTESSATLHPGCIIK 1224
Query: 944 ---------HSLNFKLSFKKTDDCPLMVY---DEITRGDGGMHVRNCTVVGPLPLLLLAT 991
+ + + K+ D+ P++ Y E+++ D G+ +R TVV PL ++L A
Sbjct: 1225 RQVLAPSRRSDMINQFTTKREDEEPIIEYLAFQELSKIDEGLTLRTVTVVPPLSVVLFAG 1284
Query: 992 EIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVV 1051
I + E ++MS D+A ++ DE+ +++ GE V+ +
Sbjct: 1285 AICLK-KETIEQFGVGEEMSFDEASLDQKDEEDGALNE------GEYVLE---------M 1328
Query: 1052 DRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKA 1088
+ WL F D+ + LR ++ L + +P +A
Sbjct: 1329 ESWLVFKGRYRDMQAVLKLRFKVMSYFLEVMKNPGRA 1365
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 188/349 (53%), Gaps = 39/349 (11%)
Query: 55 NRE-RAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKR---VETDKGKEILPSLTFSEGS 110
NRE R H V ++ + S S+G R++++ + + V E P + ++
Sbjct: 56 NREQRKFTHHVAGRLDLKSHSTGSEGNRQITISRRAFKPNLVSCISAIETKP-IELNDKQ 114
Query: 111 KLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTS 170
L L YP D + L A + + RG C M+K + + S
Sbjct: 115 MKALSYLIDKYPIDQRQIEGHLRAGFAAR----RGH-----CLRNMNKRLVEPMLVPPPS 165
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+ A +R+ R LP ++ I + +++V LI+G TGCGKTTQVPQF+LE
Sbjct: 166 --NESAEMRRF---RETLPTFKLREEILHAIRTHKVTLITGGTGCGKTTQVPQFILEEAS 220
Query: 231 SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGV 290
++G + +I+CTQPRR+ A +VA+R++ ER E +G +GY IRLE K +++ +CT+GV
Sbjct: 221 AEGRSLRIICTQPRRLPAIAVADRVAKERNERLGATVGYHIRLEQKTSSQTALTYCTSGV 280
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVS-ALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
LLR+L DDV+ +++HI +DEIHER++ +D++L ++ L + +
Sbjct: 281 LLRMLTI---------------DDVAHSISHIFLDEIHEREQNTDYLLIALKQALKARDN 325
Query: 350 LRLILMSATLDA--DRFSQYFGGCPV--IQVPGFTYPVKSFYLEDVLSI 394
L++ILMSAT++ D F +YF V + +P + V+ F+L +VL++
Sbjct: 326 LKVILMSATMEGNLDTFMRYFVDVDVAHVDIPSRLHHVEKFFLSEVLAL 374
>gi|345325634|ref|XP_001513873.2| PREDICTED: ATP-dependent RNA helicase DHX29, partial [Ornithorhynchus
anatinus]
Length = 1316
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/482 (36%), Positives = 258/482 (53%), Gaps = 40/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F ++
Sbjct: 785 MNPHKINLDLILELLAFLDRSPQFRNVEGAVLIFLPGLAHIQQLYDLLSTDRRFHSKERY 844
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 845 KLIALHSILSTQDQAAAFTLPPLGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 904
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 905 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 964
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L + K+T LG+ L
Sbjct: 965 CLHIM----KCNLGSPEDFLAKALDPPQPQVISNAMNLLRRIGACELAQPKLTPLGQHLA 1020
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1021 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALG 1075
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + +A+ WK A+ G E +C + F++ + L ++++L + G
Sbjct: 1076 MANSDHLTIYSAYLGWKKARLEGGYRSEMAYCRRNFLNRTALITLEDVKQELIKLVKAAG 1135
Query: 887 F----IPED----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F +P D ++ S + + ++ AVL AGLY V ++ + VET
Sbjct: 1136 FASSTLPNDRDGNRATQSLSLQETALLKAVLTAGLYDNVGKILYTKSIDVTEKLACVVET 1195
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G + + HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1196 AQG-RAQAHPSSVNRDLQ-----TYGWLLYQEKVRY-AKVYLRETTLISPFPILLFGGDI 1248
Query: 994 AV 995
V
Sbjct: 1249 EV 1250
Score = 196 bits (497), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 159/243 (65%), Gaps = 24/243 (9%)
Query: 159 AEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
AE V +L +++ A +++++ER +LP+ ++ I T+ ++VV+++GETG GK+
Sbjct: 488 AEDLEPVRNLFRKLQGTAKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKS 547
Query: 219 TQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGY 269
TQVP FLLE + W G+ C IVCTQPRRISA S+A R+ E G EN G N GY
Sbjct: 548 TQVPHFLLEDLLLNEWGSGK-CNIVCTQPRRISAVSLATRVCEELGCENGPGGRNSLCGY 606
Query: 270 KIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHER 329
+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HER
Sbjct: 607 QIRMESRASEATRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHER 652
Query: 330 DRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LE
Sbjct: 653 SVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLE 712
Query: 390 DVL 392
DV+
Sbjct: 713 DVV 715
>gi|281427338|ref|NP_001163976.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Xenopus (Silurana)
tropicalis]
gi|183985762|gb|AAI66336.1| Unknown (protein for MGC:186162) [Xenopus (Silurana) tropicalis]
Length = 1180
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 225/353 (63%), Gaps = 15/353 (4%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF-- 587
K L++++ + I+L LIE LL I GA+LVFLPG +I D+L +N F
Sbjct: 833 KTLSSMDLDKINLDLIEALLEWIVNGDHSYPPGAVLVFLPGLAEIKTLYDQLQSNALFNN 892
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
R + + VI PLHS + S +Q+ VF +PPPG KII+STNIAET+ITIDDVVYVIDSG+M+
Sbjct: 893 RRSKRCVIYPLHSSLSSDEQQSVFLKPPPGVTKIIISTNIAETSITIDDVVYVIDSGKMR 952
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIK 706
EK YDP ++ +L+ +WVS+A+A QR GRAGR +G+C+HL+ S L D Q+PEI+
Sbjct: 953 EKRYDPGKSMESLEDTWVSRANAMQRKGRAGRVASGVCFHLFTSHHYQYQLLDQQLPEIQ 1012
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
RIP+E+LCL++K+L+ C ++ + ++PP ++ + I LQD+GAL+ +EK+T L
Sbjct: 1013 RIPLEQLCLRIKILEMFSECRLDLVFARLIEPPRMESLHASKIRLQDLGALTKEEKLTPL 1072
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E
Sbjct: 1073 GYHLASLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVCPW--DKKEEANKKKQE 1130
Query: 825 LASLYGGQSDQLAVIAAFECWKNA-KQRGQEAW-FCSQYFVSSGVMNMLLGMR 875
A+ SD LA++ A++ W + K+ + A+ +C F+S V+ + ++
Sbjct: 1131 FAT---ANSDHLALLQAYQAWSSVIKESSRAAYQYCRDNFLSVRVLQEIASLK 1180
Score = 202 bits (515), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 167/273 (61%), Gaps = 19/273 (6%)
Query: 124 DDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVE 183
DD E L N+S + K + + F K AE A + ++ + N + ++E
Sbjct: 494 DDLESESVLVENESYANLKKKQAKKYSFNSNKAVAAENAKICKHYRAK-KTTRNYQSMLE 552
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG---ETCKIVC 240
ER KLP +D I + QV+++SG TGCGKTTQ+PQF+L+ KG I+C
Sbjct: 553 ERQKLPAWQKQDQILELLSKYQVLVVSGMTGCGKTTQIPQFILDASL-KGPPSHVSNIIC 611
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRRISA SVAER++ ER E +G ++GY+IRLES + +++CT GVLLR L +G
Sbjct: 612 TQPRRISAISVAERVAQERAERVGISVGYQIRLESVKSAATRLLYCTTGVLLRRL--EGD 669
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
+ L+ +TH++VDE+HER SDF+L +++D++ P L++ILMSATL+
Sbjct: 670 TTLQN------------VTHVVVDEVHERTEESDFLLLVLKDVMVLRPDLKIILMSATLN 717
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
A+ FS YF CPV+ +PG T+PV ++LED ++
Sbjct: 718 AELFSCYFQDCPVLHIPGRTFPVDQYFLEDAIA 750
>gi|52545949|emb|CAH56172.1| hypothetical protein [Homo sapiens]
Length = 1287
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 181/482 (37%), Positives = 259/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + LL+N + ++
Sbjct: 758 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYG-LLSNDRRFYSERY 816
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 817 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 876
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 877 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 936
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 937 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 992
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 993 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM-- 1048
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1049 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1107
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1108 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1167
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1168 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1220
Query: 994 AV 995
V
Sbjct: 1221 EV 1222
Score = 193 bits (491), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 467 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 526
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 527 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 585
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 586 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 631
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 632 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 688
>gi|355683831|gb|AER97206.1| DEAH box polypeptide 29 [Mustela putorius furo]
Length = 1359
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 179/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F + ++
Sbjct: 848 MNPHKINLDLILELLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFF-SERY 906
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 907 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 966
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 967 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1026
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E +T LG+ L
Sbjct: 1027 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLA 1082
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1083 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1137
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1138 MADSDHLTIYNAYLGWKKARQEGGCRSEIAYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1197
Query: 887 F----IPEDV----SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F P D +S + + + ++ AVL AGLY V ++ + VET
Sbjct: 1198 FSSSTTPNDWEGNRASQTLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVET 1257
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1258 AQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRYT-RVYLRETTLITPFPVLLFGGDI 1310
Query: 994 AV 995
V
Sbjct: 1311 EV 1312
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 158/244 (64%), Gaps = 24/244 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK
Sbjct: 550 KAEDLEPVRNLFRKLQNTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGK 609
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 610 STQVPHFLLEDLLLNEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCG 668
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 669 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 714
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 715 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 774
Query: 389 EDVL 392
ED++
Sbjct: 775 EDII 778
>gi|402871556|ref|XP_003899725.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Papio anubis]
Length = 1367
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 258/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 838 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 896
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 897 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 956
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R ++ +PEI R+P+EEL
Sbjct: 957 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMEYSIPEILRVPLEEL 1016
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-DEKVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L D K+T LG+ L
Sbjct: 1017 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNDPKLTPLGQHLA 1072
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1073 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1127
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1128 MADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1187
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1188 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1247
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1248 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1300
Query: 994 AV 995
V
Sbjct: 1301 EV 1302
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 547 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 606
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 607 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMES 665
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 666 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 711
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 712 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 768
>gi|148226581|ref|NP_001091401.1| ATP-dependent RNA helicase DHX29 [Xenopus laevis]
gi|224487876|sp|A3KMI0.1|DHX29_XENLA RecName: Full=ATP-dependent RNA helicase DHX29; AltName: Full=DEAH
box protein 29
gi|126361964|gb|AAI31892.1| LOC100049090 protein [Xenopus laevis]
Length = 1362
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/478 (37%), Positives = 262/478 (54%), Gaps = 33/478 (6%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + E +GA+L+FLPG DI + D L ++ F D ++
Sbjct: 834 MNPNKINLDLILELLVFLDISPEYRNVEGAVLIFLPGLADIQQLYDILSSDKRFHDRRRY 893
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ S Q + F PP G RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 894 KLIALHSILSSQDQAEAFILPPAGTRKIVLATNIAETGITIPDVVFVIDAGRTKENRYHE 953
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L +++SKASA QR GRAGR + G C+ LY++ R S ++ VPEI R+P+EEL
Sbjct: 954 SSQMSSLVETFISKASALQRQGRAGRVRNGYCFRLYTRERFESFMEYSVPEILRVPLEEL 1013
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLGCLS 772
CL + D + EDFL K LDPP I NA+ +L+ IGA L + K+T LG+ L L
Sbjct: 1014 CLHIMKCDLG-SPEDFLSKALDPPQLQVISNAMSLLRKIGACELSQPKLTPLGQHLAALP 1072
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
V+ + KML F + CLD TLA + PF PI EK RA AK +S+
Sbjct: 1073 VNVKIGKMLIFGAIFGCLDAVATLAATMTEKSPFVTPI--GEKDRADLAK---SSMAVAN 1127
Query: 833 SDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-IP 889
SD + + A+ WK + G E +C + F++ + + ++++L + GF P
Sbjct: 1128 SDHVTIFRAYLGWKAIRPEGYAAEMSYCRKNFLNRKALLTIEDVKQELIRLVRAAGFECP 1187
Query: 890 EDVSSC-------SHNARVPGIIHAVLMAGLYPMVARLRPPH-----KNGRRFVETAGGA 937
V + + +A ++ A+L AGLY V ++ + VETA G
Sbjct: 1188 RSVEANGLSSAMKALSAEETSLLKAILTAGLYDNVGKILFTKSVDITEKLACIVETAQG- 1246
Query: 938 KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
K ++HP S+N L ++Y E + + +R T++ P P+LL +IAV
Sbjct: 1247 KAQVHPSSVNRDLQIYG-----WLLYQEKVKY-SKVFLRETTLISPFPVLLFGGDIAV 1298
Score = 189 bits (481), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 147/222 (66%), Gaps = 22/222 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET--- 235
++++ +R +LP+ + + I T+ ++V++++GETG GK+TQVPQFLLE + G +
Sbjct: 557 KRLLNDREQLPVFARGNFILETLKRHRVIVVAGETGSGKSTQVPQFLLEDLLFNGGSPGK 616
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGKHSSIVFCTNGV 290
C IVCTQPRRISA S+A R+ E G + G GY+IR+ES+ G+ + +++CT G+
Sbjct: 617 CNIVCTQPRRISAMSLATRVCEELGCDSGPGGKNSLCGYQIRMESRTGEATRLLYCTTGI 676
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
LLR L Q S LK ++HIIVDE+HER SDF+L I+R++L L
Sbjct: 677 LLRKL--QEDSMLKN------------ISHIIVDEVHERTVQSDFLLIILREILHKRSDL 722
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
L+LMSAT+D ++FS YF CP+I++ G T+PV+ F+LEDV+
Sbjct: 723 HLVLMSATVDCEKFSSYFTHCPIIRISGRTFPVEVFHLEDVV 764
>gi|195447902|ref|XP_002071421.1| GK25787 [Drosophila willistoni]
gi|194167506|gb|EDW82407.1| GK25787 [Drosophila willistoni]
Length = 1306
Score = 270 bits (690), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 268/503 (53%), Gaps = 57/503 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR 588
K + + P +I+ LIE +L I S + G IL+FLPG+++I D LL + F
Sbjct: 729 KSIYLMEPMMINPELIESVLTYIVEGSHEWPREGTILIFLPGFQEIQTVHDSLLDHSLFS 788
Query: 589 -DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
KFV++PLHS + Q VFKR P G RKI+LSTNIAET++TIDD V+VID G MK
Sbjct: 789 PRAGKFVLVPLHSSLSGDDQALVFKRAPQGKRKIVLSTNIAETSVTIDDCVFVIDCGLMK 848
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIK 706
EK +D N+ +L WVS+A+AKQR GRAGR GIC HLY+ R Q VPEI+
Sbjct: 849 EKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGICIHLYTSHRFHQHFLGQPVPEIQ 908
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E++ L++K L N L +TL+ P ++ A+ L+++GAL ++++T L
Sbjct: 909 RVPLEQIVLRIKTLQMFARLNTLSVLLETLEAPSEDSVMGALSRLRNVGALDAEDQLTPL 968
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V + K++ + + CLD LT+A + PF P+ N++ A AK
Sbjct: 969 GHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPL--NKRTEADKAKRL 1026
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTE 881
A G SD L V+ A+ W + +RG + +++F+S + + ++ Q
Sbjct: 1027 FAL---GNSDHLTVLQAYRKWLDVAKRGNYTASRNYANEHFLSLNTLETIADLKYQYLEL 1083
Query: 882 LIKNGFIPEDVS----------------SCSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
L+ GF+P +V +HN ++ ++L A LYP + ++ P
Sbjct: 1084 LVSIGFVPINVPRRRKNDNDNILQLTGMEQNHNGDNNRLLTSLLCAALYPNIVKIMTPE- 1142
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
R +++TAGGA V++HP S+N +++ ++ P +VY E
Sbjct: 1143 --RVYIQTAGGAVPREPSHLDLRFKTHGDGYVKIHPSSVNSQVAVFQS---PFLVYQEKV 1197
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
R +++R+C+++ + L+L A
Sbjct: 1198 R-TTSIYIRDCSMLPLVALVLFA 1219
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 152/241 (63%), Gaps = 26/241 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
++ T R +D +++++ R +LP + + I + ++ + VV+ISGETGCGK+TQVPQF
Sbjct: 438 LQQFTER-RRDERYQKVIDGRKQLPAFAEMERILALIERSPVVVISGETGCGKSTQVPQF 496
Query: 225 LLEHIWSKG-----------ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
+L++ + + +I+CTQPRR+SA VAER++ ER + IG +GY+IRL
Sbjct: 497 ILDNWFFQSLQRSDDKNKDMPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRL 556
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
E+K + + FCT G+LLR L S + + +TH+IVDE+HER S
Sbjct: 557 ENKVSSSTRLSFCTTGILLRRLASDPL--------------LGTVTHVIVDEVHERSEES 602
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
DF+L I++ +L L++ILMSATL+A FS YFGG PV+ +PG T+PV+ +LED+L
Sbjct: 603 DFLLLILKHILRERKDLKVILMSATLNASLFSDYFGGAPVLDIPGRTFPVQQLFLEDILE 662
Query: 394 I 394
+
Sbjct: 663 V 663
>gi|66820512|ref|XP_643861.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|60471983|gb|EAL69937.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 1472
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/439 (37%), Positives = 257/439 (58%), Gaps = 38/439 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
V+ E+I L LI ++ K+ SED +IL+FLPGWEDI++TR+ + +P R+ ++F+I+P
Sbjct: 928 VDHEMI-LQLIVHIVTKVSSTSED-SILIFLPGWEDISQTRELMRRHPMLRNENEFLILP 985
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS V Q KVF++PPP RKI+LSTNIAET+ITI+DVVYVIDS ++K K ++ ++
Sbjct: 986 LHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHETQRDL 1045
Query: 658 STLQSSWVSKASAKQRAGRAGRCQA-GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQ 716
+ Q+ W K+S KQR GRAGR + G+CYH+ S+ R +L +FQ+ E++R+P+ ELCLQ
Sbjct: 1046 TLFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNTLEEFQLSEMRRMPLHELCLQ 1105
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
VK+L ++ FL + L+PP + +I NAI +L D+GAL+ ++++T LG +L + V P
Sbjct: 1106 VKVLVLG-DVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPR 1164
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA---------- 826
+ KM+ CLDP LT+A S+ ++P T +
Sbjct: 1165 IGKMIILGSYFRCLDPILTIASFSNQKNPITTLYNQGNDNNNNNNNNNNNSYYNNYYQQQ 1224
Query: 827 -----SLYGG-QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQT 880
+LY QSD L+ + F W ++ G E +C Q F+S ++ +L ++KQL +
Sbjct: 1225 PQQPKNLYPELQSDHLSFLNIFNGWLQSRMDGTEDQYC-QDFLSIPLLQQILKVKKQLLS 1283
Query: 881 EL---------IKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
+ +++GF+ + + N II A++ +GL+P +AR R +R
Sbjct: 1284 TINDLGIINAQLRDGFVNNSFFNENSNNL--DIIRAIICSGLFPNIARQR-----KKREF 1336
Query: 932 ETAGGAKVRLHPHSLNFKL 950
+T LHP S+ + L
Sbjct: 1337 KTL-SENTFLHPSSIVYNL 1354
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 151/252 (59%), Gaps = 17/252 (6%)
Query: 159 AEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
++I ++ + + A ++I ++R++LPI + + ++ +NQ+++I G+TGCGKT
Sbjct: 688 SDIGIERRAYEHNKRQTAEYKRIYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKT 747
Query: 219 TQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLES- 275
TQ+PQF++E + G C IV TQPRRIS AER++ ER E +GD +GY+IR ++
Sbjct: 748 TQIPQFVIEDMIDSGHAPYCNIVMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNV 807
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ S ++ CT G+LL+ + S + ++H+ +DE+HERD ++DF
Sbjct: 808 QPLGTSKLLVCTPGILLKRMYSDM--------------KLHNVSHLFIDEVHERDIHTDF 853
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
+L I++ +L +LR+ILMSAT+D S YFG CPVI++ + + + ++LED+ L
Sbjct: 854 LLIILKKLLADNNNLRVILMSATMDNSLVSAYFGTCPVIKLTSYHHIAQEYFLEDISKQL 913
Query: 396 KSAESNHLDSAS 407
++ D S
Sbjct: 914 NDPTISYRDEQS 925
>gi|168058998|ref|XP_001781492.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667033|gb|EDQ53672.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1100
Score = 270 bits (689), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 257/466 (55%), Gaps = 13/466 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
LA +P+ + LIE +L + ++GA+LVF+ GWE+I +++L +P +
Sbjct: 486 LAAWSPDNLGFNLIENVLLHVTQHEQEGAVLVFMTGWEEITALKEQLQRHPVLGNPDVAQ 545
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+ H + + +QK +F+ PPPG RKI+L+TN+AET+ITI+DVV+VID G+ KE SYD
Sbjct: 546 ILACHGTMATAEQKLIFEHPPPGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDAL 605
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L +W+S+ASA+QR GRAGR GI YHLY + + ++Q PE+ R P+ LC
Sbjct: 606 NNTPCLLPTWISQASARQRRGRAGRVTPGISYHLYPRAVYDAFAEYQQPELLRTPLHSLC 665
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L ++ FL + L PP + ++N++ +L+ IGAL E +T LG+ L L V
Sbjct: 666 LQIKSLKLG-SVSQFLSRALQPPEPLAVQNSVELLKTIGALDEKENLTRLGKHLSLLPVE 724
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KML + CLDP LT+A RDPF +P +K+ A + L+ G SD
Sbjct: 725 PNIGKMLIMGSIFGCLDPILTIAAGLAVRDPFIMP----SEKKELADESRLSFAGGDASD 780
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
+A++ A+E W+ A G +C + F+S + + +RKQ + L GF+ D+
Sbjct: 781 HIALVRAYEGWQEAMTYGTAYDYCWKNFLSFQTLQGMTSLRKQFSSVLRDAGFLDNDMEK 840
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK-LSFK 953
+ + ++ V+ +G+YP V + + +T +V LH +S+N K + F
Sbjct: 841 FNKYSGDRDLVRGVICSGMYPGVISVY--RRTRSTTFKTIEDGQVMLHQNSVNSKDVDFL 898
Query: 954 KTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAP 999
P +V+ + + M +R+ T V LLL ++ P
Sbjct: 899 ----YPWLVFTDKVKTSNVM-IRDTTGVSDSMLLLFGGQVNQGGEP 939
Score = 223 bits (568), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/223 (47%), Positives = 152/223 (68%), Gaps = 23/223 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSN-------QVVLISGETGCGKTTQVPQFLLEHIW- 230
++I+E R LP +D + + + QVV++SGETGCGKTTQ+PQ++LE
Sbjct: 217 QRILEFRKSLPAYKQRDALLAANAYHCFGFAMFQVVVVSGETGCGKTTQLPQYILESEIE 276
Query: 231 -SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNG 289
+G TC ++CTQPRRISA SVAER++ ERGENIG+++GY++RLE + + ++FCT G
Sbjct: 277 AGRGATCSVICTQPRRISAVSVAERVAAERGENIGESVGYQVRLEGMRSRQTQLLFCTTG 336
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
+LLR L++ ++ ++H++VDEIHER DF+L +++D+LP P
Sbjct: 337 ILLRRLMND--------------RELKGVSHVVVDEIHERGMNEDFLLIVLKDLLPRRPD 382
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
LRL+LMSATL+AD FS YF P+ +PGFTYPVKS++LED+L
Sbjct: 383 LRLVLMSATLNADLFSSYFNRAPMAHIPGFTYPVKSYFLEDIL 425
>gi|270011645|gb|EFA08093.1| hypothetical protein TcasGA2_TC005697 [Tribolium castaneum]
Length = 914
Score = 270 bits (689), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 265/459 (57%), Gaps = 24/459 (5%)
Query: 539 NPEL--IDLVLIEQLLRKIC-MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVI 595
NPE I+L LI QL+ +C + ++GAIL+FL G+ +I+ T RL++ KF+I
Sbjct: 386 NPECEDINLELILQLVIDVCGKERDEGAILIFLTGFHEIS-TLSRLMSESGRFPPGKFLI 444
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
PLHS++P+++QK++F PP G RKII++TNIAET+ITIDDVVYVID G++K ++D
Sbjct: 445 FPLHSLMPTLEQKQIFDTPPRGMRKIIIATNIAETSITIDDVVYVIDCGKIKVTNFDART 504
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
N L WVS A+A QR GRAGR + G+C+HL+++ R L + +PEI R +E++ L
Sbjct: 505 NSDILAPEWVSLANANQRRGRAGRVKPGMCFHLFTKARNMVLEQYLLPEILRKRLEDVIL 564
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
K+L +E F + +D P + A+ +L+ + AL+ DEK+T LG L L + P
Sbjct: 565 TAKILQLG-PVEPFFAQLIDSPDPGAVTVALELLKRMNALTDDEKLTPLGYHLAKLPMAP 623
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
+ KM+ F + CLDP L++A A D++DPF LP+ ++++ K ELA G +SD
Sbjct: 624 QIGKMILFGAIFSCLDPILSIAAALDFKDPFQLPV--DKEREVYKMKLELAR--GVKSDH 679
Query: 836 LAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PED 891
L E + ++ G +C YF+S M L ++KQ L + F+ P++
Sbjct: 680 LLF---HEALRGFEESGNARQYCWNYFLSHQTMKQLQDLKKQYMEYLCEMNFVRDSDPKN 736
Query: 892 VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLS 951
C+ N ++ A++ AGLYP ++ + P G+ V T +++LHP S+ L+
Sbjct: 737 -PECNLNWDNLSLVKAIICAGLYPNIS-ISPVL--GKAPVRTPSMRRLKLHPKSI---LA 789
Query: 952 FKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
K D ++VY + + + + +++ PLP++
Sbjct: 790 ECKYFDTNILVYYKKMKSKVDF-IYDASLIHPLPVIFFG 827
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 161/249 (64%), Gaps = 34/249 (13%)
Query: 164 KVESLTSRIEKDANLRQ-----------------IVEERSKLPISSFKDVITSTVDSNQV 206
K++ +R+ +DA L Q ++ +R+KLP + KD I +D NQV
Sbjct: 104 KLQHTCARLAEDATLNQSLYEDFLQKQSSPKYMNMIAKRTKLPAFNMKDEILKVIDENQV 163
Query: 207 VLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIG 264
V+ISGETGCGKTTQV QF+L+ K G CK++CTQPRRISA +VA+R++ ERGE +G
Sbjct: 164 VVISGETGCGKTTQVAQFILDDFLQKQKGSVCKVLCTQPRRISAIAVAQRVAEERGEELG 223
Query: 265 DNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIV 323
++GY IR+E + + SI FCT GV+L+++ S +S ++H+I+
Sbjct: 224 HSVGYHIRMERRPPRDRGSICFCTTGVVLKIMESDA--------------SLSWVSHLIL 269
Query: 324 DEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPV 383
DEIHERD SDF+LA+I+ + L++ILMSATL++++FS+Y+ P + +PGFTYPV
Sbjct: 270 DEIHERDVMSDFILALIKKIKAKRSDLKIILMSATLNSEKFSKYYDNAPHLNIPGFTYPV 329
Query: 384 KSFYLEDVL 392
+ FYLEDVL
Sbjct: 330 QEFYLEDVL 338
>gi|410948587|ref|XP_003981012.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Felis catus]
Length = 1365
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 257/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F + ++
Sbjct: 835 MNPHKINLDLILELLIYLDRSPQFRNVEGAVLIFLPGLAHIQQLYDLLSTDRRFF-SERY 893
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 894 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 953
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 954 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1013
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + C++ EDFL K LDPP I NA+ +L+ IGA L+E +T LG+ L
Sbjct: 1014 CLHIM----KCSLGSPEDFLAKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLA 1069
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1070 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1124
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK ++Q G E +C + F++ + L ++++L + G
Sbjct: 1125 MADSDHLTIYNAYLGWKKSRQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1184
Query: 887 FIPEDVSS------CSHNARVPGI--IHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ SH I + AVL AGLY V ++ + VET
Sbjct: 1185 FSSSTASNDWEGNRASHTLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVET 1244
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1245 AQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRYT-RVYLRETTLITPFPVLLFGGDI 1297
Query: 994 AV 995
V
Sbjct: 1298 EV 1299
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 158/244 (64%), Gaps = 24/244 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 537 KAEDLEPVRALFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 596
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 597 STQVPHFLLEDLLLNEWGASK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCG 655
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 656 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 701
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 702 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 761
Query: 389 EDVL 392
ED++
Sbjct: 762 EDII 765
>gi|91088735|ref|XP_975259.1| PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 36
[Tribolium castaneum]
Length = 885
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 263/455 (57%), Gaps = 22/455 (4%)
Query: 541 ELIDLVLIEQLLRKIC-MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH 599
E I+L LI QL+ +C + ++GAIL+FL G+ +I+ T RL++ KF+I PLH
Sbjct: 361 EDINLELILQLVIDVCGKERDEGAILIFLTGFHEIS-TLSRLMSESGRFPPGKFLIFPLH 419
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
S++P+++QK++F PP G RKII++TNIAET+ITIDDVVYVID G++K ++D N
Sbjct: 420 SLMPTLEQKQIFDTPPRGMRKIIIATNIAETSITIDDVVYVIDCGKIKVTNFDARTNSDI 479
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L WVS A+A QR GRAGR + G+C+HL+++ R L + +PEI R +E++ L K+
Sbjct: 480 LAPEWVSLANANQRRGRAGRVKPGMCFHLFTKARNMVLEQYLLPEILRKRLEDVILTAKI 539
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
L +E F + +D P + A+ +L+ + AL+ DEK+T LG L L + P + K
Sbjct: 540 LQLG-PVEPFFAQLIDSPDPGAVTVALELLKRMNALTDDEKLTPLGYHLAKLPMAPQIGK 598
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
M+ F + CLDP L++A A D++DPF LP+ ++++ K ELA G +SD L
Sbjct: 599 MILFGAIFSCLDPILSIAAALDFKDPFQLPV--DKEREVYKMKLELAR--GVKSDHLLF- 653
Query: 840 AAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSC 895
E + ++ G +C YF+S M L ++KQ L + F+ P++ C
Sbjct: 654 --HEALRGFEESGNARQYCWNYFLSHQTMKQLQDLKKQYMEYLCEMNFVRDSDPKN-PEC 710
Query: 896 SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKT 955
+ N ++ A++ AGLYP ++ + P G+ V T +++LHP S+ L+ K
Sbjct: 711 NLNWDNLSLVKAIICAGLYPNIS-ISPVL--GKAPVRTPSMRRLKLHPKSI---LAECKY 764
Query: 956 DDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
D ++VY + + + + +++ PLP++
Sbjct: 765 FDTNILVYYKKMKSKVDF-IYDASLIHPLPVIFFG 798
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 161/249 (64%), Gaps = 34/249 (13%)
Query: 164 KVESLTSRIEKDANLRQ-----------------IVEERSKLPISSFKDVITSTVDSNQV 206
K++ +R+ +DA L Q ++ +R+KLP + KD I +D NQV
Sbjct: 104 KLQHTCARLAEDATLNQSLYEDFLQKQSSPKYMNMIAKRTKLPAFNMKDEILKVIDENQV 163
Query: 207 VLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIG 264
V+ISGETGCGKTTQV QF+L+ K G CK++CTQPRRISA +VA+R++ ERGE +G
Sbjct: 164 VVISGETGCGKTTQVAQFILDDFLQKQKGSVCKVLCTQPRRISAIAVAQRVAEERGEELG 223
Query: 265 DNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIV 323
++GY IR+E + + SI FCT GV+L+++ S +S ++H+I+
Sbjct: 224 HSVGYHIRMERRPPRDRGSICFCTTGVVLKIMESDA--------------SLSWVSHLIL 269
Query: 324 DEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPV 383
DEIHERD SDF+LA+I+ + L++ILMSATL++++FS+Y+ P + +PGFTYPV
Sbjct: 270 DEIHERDVMSDFILALIKKIKAKRSDLKIILMSATLNSEKFSKYYDNAPHLNIPGFTYPV 329
Query: 384 KSFYLEDVL 392
+ FYLEDVL
Sbjct: 330 QEFYLEDVL 338
>gi|320170140|gb|EFW47039.1| helicase domain-containing protein [Capsaspora owczarzaki ATCC 30864]
Length = 1493
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 264/503 (52%), Gaps = 63/503 (12%)
Query: 541 ELIDLVLIEQLLRKICMDS---EDGAILVFLPGWEDINKTRDRLL----ANP-FFRDTSK 592
+++++ LI + IC + ED +L+F G ++I + + ++ A P + +
Sbjct: 941 DMLNVDLIAATVMHICTTTPAKED--VLIFASGMQEIKQCVEAIMYAFDALPRATKGNQQ 998
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+++PLHS + +QK+VF RK+++STN+AET++T+D +V+VID+GR+KE YD
Sbjct: 999 LLVLPLHSTLSVPEQKRVFDATGATTRKVVVSTNVAETSVTVDGIVHVIDTGRVKETRYD 1058
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEE 712
+S+L+ +W+SKA+A+QR GRAGR QAGICY L++ R+ + D Q PEI R+P+E+
Sbjct: 1059 AQRGMSSLEDTWISKANARQRKGRAGRTQAGICYRLFTSKRSELMADHQAPEILRVPLEQ 1118
Query: 713 LCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK-VTELGEKLGCL 771
LCLQVK + ++ FL K L PP + + +AI L DIGAL D K +T LG L +
Sbjct: 1119 LCLQVKAMG-TADVVQFLGKALTPPDTKAVTHAIDALVDIGALHRDTKALTPLGVHLASI 1177
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGG 831
V ++K+L F + CLDP LT+A +R PF + + +F + G
Sbjct: 1178 PVDARIAKVLIFGAIFHCLDPILTVAACMGFRSPFITSVDKRAQADEVKKRFAI-----G 1232
Query: 832 QSDQLAVIAAFECWKN------AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
+SD L A+ W N A + G FC F+S M + +RKQ L
Sbjct: 1233 KSDLLGYSKAYAEWHNCAGDGAASKTGARRKFCEDNFLSMQSMQGISDLRKQFLDILASI 1292
Query: 886 GFIPEDV----------SSCSH-----NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
GF+P + ++ +H N+ ++ AVL AGLYP VA + PP R+F
Sbjct: 1293 GFVPAAIMHHHKQQDAQAAEAHRLLNANSTNIKVLKAVLAAGLYPQVASVVPPE---RQF 1349
Query: 931 VET------------------AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
V+ GG +V +HP S F S K DD ++Y+E
Sbjct: 1350 VQVQQGMVVKEAKASELKLLLKGGTQVFVHPTSATF--SLLKMDD-RFVLYNE-KMATSK 1405
Query: 973 MHVRNCTVVGPLPLLLLATEIAV 995
++R+ TVV PL+L IA+
Sbjct: 1406 AYLRDTTVVSAYPLILFGGNIAI 1428
Score = 229 bits (584), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 155/219 (70%), Gaps = 20/219 (9%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGET 235
+++ ++RSKLP S+ I S + +NQVV+ISGETGCGKTTQVPQF+L+ + ++G T
Sbjct: 658 FKKVFDKRSKLPSHSYVKEILSALAANQVVVISGETGCGKTTQVPQFILDALIDQNQGST 717
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
C+++CTQPRRISA SVAER++VER E IG+ +GY +RLE+K + ++F T GVLLR L
Sbjct: 718 CRLLCTQPRRISALSVAERVAVERAEKIGEGVGYSVRLEAKYSASTRLLFSTIGVLLRFL 777
Query: 296 VSQGVSRLKEASNKPAKDD--VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
+DD ++A +HI++DE+HER SDF+L +R++L LRL+
Sbjct: 778 ----------------QDDPLLNAFSHIVIDEVHERGVESDFVLIALREVLAKRRDLRLV 821
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
LMSATLD++ FS YFGG PVI +PGF YPV+ +LEDV+
Sbjct: 822 LMSATLDSNTFSSYFGGVPVISIPGFAYPVEILHLEDVV 860
>gi|311273735|ref|XP_003133996.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Sus scrofa]
Length = 1366
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 255/482 (52%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F + ++
Sbjct: 836 MNPHKINLDLILELLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFF-SERY 894
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 895 KVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 954
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 955 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1014
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1015 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLA 1070
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1071 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1125
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1126 MADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1185
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F + S R ++ AVL AGLY V ++ + VET
Sbjct: 1186 FSSPTSFNGSEGNRASQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVET 1245
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P +LL +I
Sbjct: 1246 AQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKIRY-ARVYLRETTLITPFSVLLFGGDI 1298
Query: 994 AV 995
V
Sbjct: 1299 EV 1300
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 158/244 (64%), Gaps = 24/244 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK
Sbjct: 538 KAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGK 597
Query: 218 TTQVPQFLLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IG 268
+TQVP FLLE + W + C IVCTQPRRISA S+A R+ E G EN G N G
Sbjct: 598 STQVPHFLLEDLLLNEWGTSK-CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCG 656
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 657 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 702
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+L
Sbjct: 703 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHL 762
Query: 389 EDVL 392
ED++
Sbjct: 763 EDII 766
>gi|113197901|gb|AAI21307.1| dhx30 protein [Xenopus (Silurana) tropicalis]
Length = 635
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 253/466 (54%), Gaps = 33/466 (7%)
Query: 544 DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVP 603
DL LI + I + G IL FLPGW++I + RL + F+I+P+HS +P
Sbjct: 91 DLDLISSAILHIADNGPPGGILCFLPGWQEIRGVQQRLEEKQQWAK-ENFLILPVHSNIP 149
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+ Q+ +F+RPP G RKI+L+TNIAET++TIDD+V+V+DSG KE+ YD VS L++S
Sbjct: 150 MMDQQSIFQRPPQGVRKIVLATNIAETSVTIDDIVHVVDSGMQKEQRYDLRTKVSCLETS 209
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 723
WVSK++ QR GRAGRCQ G YHL+++ + ++ FQVPEI R P+E L LQ K+ P
Sbjct: 210 WVSKSNVTQRRGRAGRCQPGFSYHLFTREQHKAMATFQVPEILRTPLENLVLQAKVHVPE 269
Query: 724 CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
+FL + L+ P S I +A+ +LQ+I L +E++T LG ++ +S P ++K +
Sbjct: 270 MTAVEFLSQALESPESQAITDAVQLLQEIRVLDSEEQLTLLGHRVSNISTDPKLAKAIVL 329
Query: 784 AILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
A + CL P L + AC + RDPF + + RA + + A +SD LA + A
Sbjct: 330 ASIFRCLHPMLVIVACLT--RDPFQGGL----QNRAQVNRAKKALSAETRSDHLAYVRAL 383
Query: 843 ECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC---- 895
+ W+ R F Y +S G + + G+ Q + + + F+ + S C
Sbjct: 384 QGWEEVLSRRNGTARENFLETYSLSPGALRFIQGLVTQFSSN-VYDAFLVSEASECRDGY 442
Query: 896 ------SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR-----LHPH 944
SH ++ AVL+AGLYP + ++R + +F + K R LH
Sbjct: 443 SLCNQFSHEEE---LLKAVLLAGLYPNLVQVRRGFVSKGKFKPNSLLYKTREGPVLLHRT 499
Query: 945 SLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
++N +K P + Y + G + VR+ ++V PL +LLLA
Sbjct: 500 TINRD---EKHLPSPWLTYFLAVKSGGSVFVRDSSMVHPLAVLLLA 542
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 59/76 (77%)
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERD +DF+L +++ + P L+++LMSAT D +R S+YFGGCP+I+VPGF YP
Sbjct: 1 VDEVHERDVNTDFLLILLKMVQQQNPKLKVVLMSATGDNERISRYFGGCPIIRVPGFMYP 60
Query: 383 VKSFYLEDVLSILKSA 398
VK YLEDV ++L ++
Sbjct: 61 VKEHYLEDVAAMLGTS 76
>gi|195397459|ref|XP_002057346.1| GJ16398 [Drosophila virilis]
gi|194147113|gb|EDW62832.1| GJ16398 [Drosophila virilis]
Length = 1292
Score = 268 bits (685), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 269/503 (53%), Gaps = 57/503 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR 588
K + + P +I+ LIE +L+ I + G+IL+FLPG+++I + LL + F
Sbjct: 724 KSIYLMEPMMINPELIESVLKHIVEGEHEWPREGSILIFLPGFQEIQTVHNALLDSAMFA 783
Query: 589 DTS-KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
+ KFV++PLHS + S Q VFKR PPG RKI+LSTNIAET++TIDD V+VID G MK
Sbjct: 784 PRAGKFVLVPLHSALSSEDQALVFKRAPPGKRKIVLSTNIAETSVTIDDCVFVIDCGLMK 843
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIK 706
EK +D N+ +L WVS+A+AKQR GRAGR G+C HLY+ R Q VPEI+
Sbjct: 844 EKGFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSFRYQHHILAQPVPEIQ 903
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E++ L++K L + N L +TL+ P ++ A++ L+D+GAL ++++T L
Sbjct: 904 RVPLEQIVLRIKTLQTFASRNTLAVLLETLEAPKEDSVLGALMRLRDVGALDAEDQLTPL 963
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V + K++ + + CLD LT+A + PF P+ N++ A K +
Sbjct: 964 GHHLSALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPL--NKRVEADKRKRQ 1021
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTE 881
A SD L V+ A+ W +RG + S+ F+S + + ++ Q
Sbjct: 1022 FAL---DHSDHLTVLNAYRKWLAVAKRGHYGASRNYASENFLSINTLETIADLKYQYLEL 1078
Query: 882 LIKNGFIPEDVSS------------CSHNARVPG----IIHAVLMAGLYPMVARLRPPHK 925
L+ GF+P +V H V G ++ ++L A LYP + ++ P
Sbjct: 1079 LVSIGFVPINVPRKRPNSSDNILQLTGHEQNVNGENNRLLTSLLCAALYPNIVKIMTP-- 1136
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
R +++TAGGA VR+HP S+N +++ + P +VY E
Sbjct: 1137 -DRIYIQTAGGAVPREPGHQDLRFKTRGDGYVRIHPSSVNSQVAVFQA---PFLVYQEKV 1192
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+++R+C+++ + L+L A
Sbjct: 1193 -CTSSIYIRDCSMLPLIALVLFA 1214
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 151/228 (66%), Gaps = 23/228 (10%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
+D +++E R KLP + + I + +DSNQVV+ISGETGCGK+TQVPQF+L++ + +
Sbjct: 443 RDERYHKLIEARRKLPAFAEMERILALIDSNQVVVISGETGCGKSTQVPQFILDNWFFRA 502
Query: 234 ET---------CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
+I+CTQPRR+SA VAER++ ER + IG +GY+IRLE+K + +
Sbjct: 503 TQLPPKSDLPHVEILCTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKISPSTRLS 562
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S + +S ++H+IVDE+HER + SDF+L I++++L
Sbjct: 563 FCTTGILLRRLASDPL--------------LSNVSHVIVDEVHERSQDSDFLLLILKNIL 608
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
L++ILMSATL+A FS YFGG PV+ +PG T+PV+ +LED+L
Sbjct: 609 RERKDLKVILMSATLNATLFSDYFGGAPVLDIPGRTFPVQQLFLEDIL 656
>gi|380019786|ref|XP_003693783.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DHX57-like [Apis florea]
Length = 1232
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 268/499 (53%), Gaps = 53/499 (10%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR 588
K L V+ + I+ LIE +L I + G+IL+FLPG+ +I +DRL N F
Sbjct: 669 KNLYVVDYDKINFELIETILEWITFGEHNYPKTGSILIFLPGFAEIIALKDRLNDNKFLS 728
Query: 589 -DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
T KF+I+PLHS + + +Q VFK+ RKI+LSTN+AET+ITIDD V+VIDSG+MK
Sbjct: 729 PKTGKFIIVPLHSSLSNEEQNLVFKKSK-NVRKIVLSTNLAETSITIDDCVFVIDSGKMK 787
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIK 706
E ++ N+ +L++ WVS+A+A QR GRAGR +GIC HLY+ + Q VPEI
Sbjct: 788 ETRFNSNQNMESLETCWVSRANALQRKGRAGRVMSGICIHLYTSYKFKYHFTAQPVPEIL 847
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
RIP+E L L+++LL ++ L K L+PP I +AI LQD+GA + + +T L
Sbjct: 848 RIPLEPLLLRIQLLHIGKKIDLHKILSKMLEPPTEENINSAIKRLQDVGAFNSECTLTPL 907
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V+ + K++ F + CLD ALT+A +++PFT+P EK+ AK E
Sbjct: 908 GHHLATLPVNVRIGKLILFGAIFCCLDSALTIAACLSHKNPFTIPF---EKRHEIDAKKE 964
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTEL 882
+ SDQL ++ A++ W A R A F ++ ++S + L ++ QL L
Sbjct: 965 ---FFTANSDQLTILKAYKKWLEAYTRNSNAGQAFANENYLSMRTLCTLADIKYQLLELL 1021
Query: 883 IKNGFIPEDVSSCSHN----ARVPG-----------IIHAVLMAGLYPMVARLRPPHKNG 927
+ GF+P ++ N + G ++ +L A LYP V ++ P K+
Sbjct: 1022 VSIGFVPINLPKRQPNVDKIVEITGFELNINNDNYKLLQGLLCAALYPNVVKVFTPEKSF 1081
Query: 928 R----------------RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
+ RF +T V +HP S+NF + + + P +V+ E +
Sbjct: 1082 QIQSAGAVPIQPKPEELRF-QTKNDGFVSIHPSSVNFHVGYFPS---PYLVFQEKVKT-S 1136
Query: 972 GMHVRNCTVVGPLPLLLLA 990
+ ++ ++V LPL+L +
Sbjct: 1137 KIFIKEVSMVPILPLILFS 1155
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 142/227 (62%), Gaps = 22/227 (9%)
Query: 173 EKDANLR--QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
EK N R ++ E R LP + D I + NQV +ISGETGCGK+TQVPQFLL+ W
Sbjct: 390 EKQTNSRYKKMKEIRETLPAWTKMDEILELIHKNQVTIISGETGCGKSTQVPQFLLDD-W 448
Query: 231 -----SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVF 285
E I+CTQPRRISA VAER++ ER E IGD +GY+IRLESK + + F
Sbjct: 449 ICNRSKSKEHVNIICTQPRRISAVGVAERVATERNECIGDIVGYQIRLESKISNRTRLTF 508
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G+LL+ S P DV THIIVDE+HER SDF+L +++++L
Sbjct: 509 CTTGILLQRF-----------SMNPELTDV---THIIVDEVHERSAESDFLLMLLKELLH 554
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L++ILMSATL ++ FS YF G PV+ +PG T+PV+ +LED+
Sbjct: 555 KRSNLKIILMSATLKSEVFSSYFKGAPVLCIPGKTFPVERIFLEDIF 601
>gi|166795915|ref|NP_001107694.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Xenopus (Silurana)
tropicalis]
gi|158253630|gb|AAI54057.1| dhx30 protein [Xenopus (Silurana) tropicalis]
Length = 813
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 253/466 (54%), Gaps = 33/466 (7%)
Query: 544 DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVP 603
DL LI + I + G IL FLPGW++I + RL + F+I+P+HS +P
Sbjct: 269 DLDLISSAILHIADNGPPGGILCFLPGWQEIRGVQQRLEEKQQWAK-ENFLILPVHSNIP 327
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+ Q+ +F+RPP G RKI+L+TNIAET++TIDD+V+V+DSG KE+ YD VS L++S
Sbjct: 328 MMDQQSIFQRPPQGVRKIVLATNIAETSVTIDDIVHVVDSGMQKEQRYDLRTKVSCLETS 387
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 723
WVSK++ QR GRAGRCQ G YHL+++ + ++ FQVPEI R P+E L LQ K+ P
Sbjct: 388 WVSKSNVTQRRGRAGRCQPGFSYHLFTREQHKAMATFQVPEILRTPLENLVLQAKVHVPE 447
Query: 724 CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
+FL + L+ P S I +A+ +LQ+I L +E++T LG ++ +S P ++K +
Sbjct: 448 MTAVEFLSQALESPESQAITDAVQLLQEIRVLDSEEQLTLLGHRVSNISTDPKLAKAIVL 507
Query: 784 AILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
A + CL P L + AC + RDPF + + RA + + A +SD LA + A
Sbjct: 508 ASIFRCLHPMLVIVACLT--RDPFQGGL----QNRAQVNRAKKALSAETRSDHLAYVRAL 561
Query: 843 ECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC---- 895
+ W+ R F Y +S G + + G+ Q + + + F+ + S C
Sbjct: 562 QGWEEVLSRRNGTARENFLETYSLSPGALRFIQGLVTQFSSN-VYDAFLVSEASECRDGY 620
Query: 896 ------SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR-----LHPH 944
SH ++ AVL+AGLYP + ++R + +F + K R LH
Sbjct: 621 SLCNQFSHEEE---LLKAVLLAGLYPNLVQVRRGFVSKGKFKPNSLLYKTREGPVLLHRT 677
Query: 945 SLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
++N +K P + Y + G + VR+ ++V PL +LLLA
Sbjct: 678 TINRD---EKHLPSPWLTYFLAVKSGGSVFVRDSSMVHPLAVLLLA 720
Score = 195 bits (495), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 145/217 (66%), Gaps = 23/217 (10%)
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVCTQPRR 245
LP+ ++ I S ++ + VV+I+G+TGCGKTT++PQF+LE + +G C ++ TQPRR
Sbjct: 55 LPVDGQRESIVSAIERHPVVVIAGDTGCGKTTRIPQFILEDAILRGQGADCNMLITQPRR 114
Query: 246 ISATSVAERISVERGENIGDNIGYKIRLES----KGGKHSSIVFCTNGVLLRLLVSQGVS 301
ISA SVA R+ E G + N+GY++RLES +GG +++FCT GVLL
Sbjct: 115 ISAVSVAHRVGHELGPTLRRNVGYQVRLESMLPPRGG---ALLFCTVGVLL--------- 162
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
K+ P + VS HI+VDE+HERD +DF+L +++ + P L+++LMSAT D
Sbjct: 163 --KKLQGNPTLEGVS---HILVDEVHERDVNTDFLLILLKMVQQQNPKLKVVLMSATGDN 217
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSA 398
+R S+YFGGCP+I+VPGF YPVK YLEDV ++L ++
Sbjct: 218 ERISRYFGGCPIIRVPGFMYPVKEHYLEDVAAMLGTS 254
>gi|344272290|ref|XP_003407967.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Loxodonta africana]
Length = 1339
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/482 (36%), Positives = 257/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL R + +GA+L+FLPG I + D L + F ++
Sbjct: 809 MNPHKINLDLILELLVYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFY-PERY 867
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE +
Sbjct: 868 KVIALHSILSTQDQAAAFTFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKFHE 927
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R ++ VPEI R+P+EEL
Sbjct: 928 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMEYSVPEILRVPLEEL 987
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + C++ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 988 CLHIM----KCSLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1043
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CL+P TLA + PFT PI R A ++L
Sbjct: 1044 ALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1098
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1099 MADSDHLTIYNAYLGWKKARQEGGYRSEMAYCRRNFLNRTSLLTLEDVKQELIKLVRAAG 1158
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL AGLY V ++ + VET
Sbjct: 1159 FSSSTTSNSWEGNRASQTLSFQEVALLKAVLAAGLYDNVGKILYTKSVDVTEKLACMVET 1218
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N +L +++ E R +++R T++ P P+LL +I
Sbjct: 1219 AQG-KAQVHPSSVNREL-----QTYGWLLHQEKVRY-ARVYLRETTLITPFPVLLFGGDI 1271
Query: 994 AV 995
V
Sbjct: 1272 EV 1273
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 192/343 (55%), Gaps = 40/343 (11%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+ AE V +L +++ + +++++ER +LP+ +++I T+ ++VV+++GETG G
Sbjct: 539 ANAEDLEPVRNLFRKLQGTSKYQRLLKERQQLPVFKHRNLIVETLKRHRVVVVAGETGSG 598
Query: 217 KTTQVPQFLLEHIW--SKGET-CKIVCTQPRRISATSVAERISVERGENIGDN-----IG 268
K+TQVP FLLE + +G + C IVCTQPRRISA S+A R+ E G G G
Sbjct: 599 KSTQVPHFLLEDLLLNERGTSKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCG 658
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 659 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHE 704
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV
Sbjct: 705 RSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPV----- 759
Query: 389 EDVLSILKSAESNHLDSASLIVPNE-------DPELTEENKSTLDEAISLAWSNDEFDML 441
E ++I ++++ + +P + +P + + T + + D++
Sbjct: 760 EGEITINVTSKAGGIKKYQEYIPVQTGASADLNPFYQKFSSRTQHAILYMNPHKINLDLI 819
Query: 442 LE-LVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLS 483
LE LV L+ SP N + + L+ L G + + LLS
Sbjct: 820 LELLVYLDRSPQFRNIEGAV-----LIFLPGLAHIQQLYDLLS 857
>gi|431908598|gb|ELK12191.1| ATP-dependent RNA helicase DHX29 [Pteropus alecto]
Length = 1368
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 176/483 (36%), Positives = 256/483 (53%), Gaps = 43/483 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+N I+L LI +LL R + +GA+L+FLPG I + D L ++ F + ++
Sbjct: 838 MNHHKINLDLILELLTYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFF-SERY 896
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 897 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 956
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ PEI R+P+EEL
Sbjct: 957 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSDPEILRVPLEEL 1016
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1017 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1072
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLD TLA + PFT PI R A ++L
Sbjct: 1073 ALPVNVKIGKMLIFGAIFGCLDSVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1127
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L +L+K
Sbjct: 1128 MADSDHLTIYNAYLGWKKARQEGGHRSEIAYCRRSFLNRTSLLTLEDVKQEL-IKLVKAA 1186
Query: 887 FIPEDVSSCSHNARVP---------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVE 932
+S H ++ AVL AGLY V ++ + VE
Sbjct: 1187 GFSSSTTSNGHEGNKASQTLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVE 1246
Query: 933 TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
TA G K ++HP S+N L ++Y E R +++R T++ P P+LL +
Sbjct: 1247 TAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKIRY-ARVYLRETTLITPFPVLLFGGD 1299
Query: 993 IAV 995
I V
Sbjct: 1300 IEV 1302
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 154/236 (65%), Gaps = 22/236 (9%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ ++ I T+ ++VV+++GETG GK+TQVP F
Sbjct: 547 VRNLFIKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHF 606
Query: 225 LLEHIW---SKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLESK 276
LLE + S C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES+
Sbjct: 607 LLEDLLLNESGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESR 666
Query: 277 GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFM 336
+ + +++CT GVLLR L G+ ++ ++H+IVDE+HER SDF+
Sbjct: 667 ASESTRLLYCTTGVLLRKLQEDGL--------------LTNVSHVIVDEVHERSVQSDFL 712
Query: 337 LAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 713 LIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 768
>gi|355565624|gb|EHH22053.1| hypothetical protein EGK_05242 [Macaca mulatta]
Length = 1466
Score = 267 bits (682), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 261/438 (59%), Gaps = 29/438 (6%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 761 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 820
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L N F R ++
Sbjct: 821 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQCNSLFNNRRSN 880
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 881 RCVIHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 940
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 941 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1000
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DEK+T LG L
Sbjct: 1001 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHADSLRASKIRLRDLGALTPDEKLTPLGYHL 1060
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1061 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFAF- 1117
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1118 --ANSDYLALLQAYKGWQLSTREGVRAGYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1174
Query: 886 GFIPEDVSSCSHNARVPG 903
GF E + + R G
Sbjct: 1175 GFAREGLRAREIEKRAQG 1192
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 149/221 (67%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 535 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 594
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 595 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 654
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 655 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 700
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 701 SATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 741
>gi|449278448|gb|EMC86290.1| ATP-dependent RNA helicase DHX29, partial [Columba livia]
Length = 1293
Score = 266 bits (681), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 243/455 (53%), Gaps = 36/455 (7%)
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
+GA+L+FLPG I + D + + F + +I LHS++ + Q F PP G RK
Sbjct: 791 EGAVLIFLPGLAHIQQLYDLISTDRRFNLRDRHRLIALHSVLSTQDQAAAFTIPPLGVRK 850
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
I+L+TNIAET ITI DVV+VID+GR KE Y + +S+L+ ++VSKASA QR GRAGR
Sbjct: 851 IVLATNIAETGITIPDVVFVIDTGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGRV 910
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI---EDFLQKTLDPP 737
+AG C+ +Y++ R S ++ VPEI R+P+EELCL + CN+ EDFL + LDPP
Sbjct: 911 RAGFCFRMYTRDRFESFMEYSVPEILRVPLEELCLHIM----KCNLGSPEDFLSRALDPP 966
Query: 738 VSVTIRNAIIVLQDIGALSLDE-KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
I NA+ +L+ IGA L+E K+T LG+ L L V+ + KML F + CLDP TL
Sbjct: 967 QQQVIGNAMNLLRKIGACLLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1026
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG---Q 853
A + PFT PI R A +SL SD + + A+ WK A+Q G
Sbjct: 1027 AAVMTEKSPFTTPIG-----RKDEADLAKSSLAMAVSDHITIYNAYLGWKKARQEGGYRA 1081
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDVSSCSHNARVP-------GII 905
E +C + F++ + L ++++L + GF P N ++
Sbjct: 1082 EMTYCRRNFLNRTSLLTLEDVKQELIRVVRAAGFTAPTTQCGWDRNGATQSLSLHEIALL 1141
Query: 906 HAVLMAGLYPMVARLRPPH-----KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
AVL AGLY V ++ + VETA G K ++HP S+N L
Sbjct: 1142 KAVLTAGLYDNVGKILYTKSVDVTEKLACMVETAQG-KAQVHPSSVNRDLQMYG-----W 1195
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
++Y E R +++R T++ P P+LL +I V
Sbjct: 1196 LLYQEKVRY-AKVYLRETTLISPFPILLFGGDIEV 1229
Score = 186 bits (473), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 150/232 (64%), Gaps = 21/232 (9%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L +++ + +++++ER +LP+ + I T+ ++VV+++GETG GK+TQVP FLLE
Sbjct: 477 LFKKLQSSSKYQRLLKERQELPVFKHRYSIVETLKKHRVVVVAGETGSGKSTQVPHFLLE 536
Query: 228 HIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGKH 280
+ C IVCTQPRRISA S+A R+ E G G GY+IR+ES+ G+
Sbjct: 537 DLLLDEGSSKCNIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEA 596
Query: 281 SSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII 340
+ +++CT GVLLR L G+ +S+++H+IVDE+HER SDF+L I+
Sbjct: 597 TRLLYCTTGVLLRKLQEDGL--------------LSSISHVIVDEVHERSVQSDFLLVIL 642
Query: 341 RDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
R++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F++EDV+
Sbjct: 643 REILHKRSDLHLILMSATVDSEKFSSYFSHCPILRISGRSYPVEVFHVEDVI 694
>gi|195047077|ref|XP_001992267.1| GH24656 [Drosophila grimshawi]
gi|193893108|gb|EDV91974.1| GH24656 [Drosophila grimshawi]
Length = 1291
Score = 266 bits (680), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 270/499 (54%), Gaps = 64/499 (12%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE-----DGAILVFLPGWEDINKTRDRLLANPFFRDTS- 591
+NPELI+ VL K ++ E +G+IL+FLPG+++I + LL + F +
Sbjct: 733 INPELIESVL------KYIVEGEHEWPHEGSILIFLPGFQEIQSVHNALLDSSIFAPRAG 786
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
K+V++PLHS + S Q VFKR P G RKI+LSTNIAET++TIDD V+VID G MKEK +
Sbjct: 787 KYVLVPLHSALSSEDQALVFKRAPAGKRKIVLSTNIAETSVTIDDCVFVIDCGLMKEKGF 846
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKRIPI 710
D N+ +L WVS+A+AKQR GRAGR G+C HLY+ R Q VPEI+R+P+
Sbjct: 847 DSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQHHILAQPVPEIQRVPL 906
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E++ L++K L + N L +TL+ P ++ A++ L+D+GAL D+++T LG L
Sbjct: 907 EQIVLRIKTLQTFASRNTLAVLLETLEAPKEDSVLGALMRLRDVGALDADDQLTPLGHHL 966
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ + + CLD LT+A + PF P+ N++ A K + A
Sbjct: 967 AALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFLSPL--NKRVEADKRKRQFAL- 1023
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
SD L V+ A+ W +RG + S+ ++S + + ++ Q L+
Sbjct: 1024 --DHSDHLTVLNAYRKWLAVAKRGHYGASRNYASENYLSINTLETIADLKYQYLELLVSI 1081
Query: 886 GFIPEDV----SSCS--------HNARVPG----IIHAVLMAGLYPMVARLRPPHKNGRR 929
GF+P +V S+ S H V G ++ ++L A LYP + ++ P R
Sbjct: 1082 GFVPVNVPRRRSNASDNILQLTGHEQNVNGENNRLLTSLLCAALYPNIVKIMTP---DRI 1138
Query: 930 FVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
+++TAGGA VR+HP S+N ++S + P +VY E
Sbjct: 1139 YIQTAGGAVPREPGHQDLRFKTRGDGYVRIHPSSVNSQVSVFQA---PFLVYQEKV-STS 1194
Query: 972 GMHVRNCTVVGPLPLLLLA 990
+++R+C+++ + L+L A
Sbjct: 1195 SIYIRDCSMLPLIALVLFA 1213
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 160/250 (64%), Gaps = 26/250 (10%)
Query: 155 KMSKAEIAM---KVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISG 211
+ + AE+A ++ L + +D +++E R KLP + + I + +DS+ VV+ISG
Sbjct: 420 RRNAAELARENRRLLQLFNERRRDERYHKLIEARRKLPAFAEMEHILALIDSSPVVVISG 479
Query: 212 ETGCGKTTQVPQFLLEHIWSKG---------ETCKIVCTQPRRISATSVAERISVERGEN 262
ETGCGK+TQVPQF+L++ + K +I+CTQPRR+SA VAER++ ER +
Sbjct: 480 ETGCGKSTQVPQFILDNWFFKALQLPAKSDLPHVEILCTQPRRLSAIGVAERVANERLDR 539
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG +GY+IRLE+K + + FCT G+LLR L S + +S +TH+I
Sbjct: 540 IGQLVGYQIRLENKISASTRLSFCTTGILLRRLASDPL--------------LSNVTHVI 585
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HER + SDF+L I++++L L++ILMSATL+A FS YFGG PV+ +PG T+P
Sbjct: 586 VDEVHERSQDSDFLLLILKNILRERKDLKIILMSATLNAALFSDYFGGAPVLDIPGRTFP 645
Query: 383 VKSFYLEDVL 392
V+ +LED+L
Sbjct: 646 VQQLFLEDIL 655
>gi|440804857|gb|ELR25721.1| helicase conserved Cterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1534
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 186/520 (35%), Positives = 275/520 (52%), Gaps = 80/520 (15%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE--------------DGAILVFLPGWEDINKTRDR 580
LAT+N ++ L+E L+ IC + E GAILVF G DI +R
Sbjct: 961 LATINENKLEPALLEHLIFFICEEGERTFPELSEEKGSGSKGAILVFFSGMADILTMLER 1020
Query: 581 LLANPFFRDTS-KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L R K++I+PLHS + + QQ++VF+RPP G RKIILSTNIAET++TIDDVV
Sbjct: 1021 LQRGARDRRAEHKYLILPLHSSISTAQQQRVFERPPQGVRKIILSTNIAETSVTIDDVVV 1080
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID+G+M E YDP + +S L +W++KA+A QR GRAGR + G+C+ LY++ R A L D
Sbjct: 1081 VIDTGKMNEMQYDPVSKLSCLGETWIAKANAAQRRGRAGRVKKGLCFKLYTERRHADLMD 1140
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-D 758
+ PEI R+P+E+LCLQ+KLL+ ++ FL + L PP I++A+ L + AL +
Sbjct: 1141 QRPPEILRVPLEQLCLQIKLLNVRATVKQFLHQALQPPEDHAIQSALNTLHQVNALEKEE 1200
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA-SDYRDPFTLPISPNEKKR 817
EK+T LG L L V + KM+ F ++ CLDP LT+A A S + F P P+ ++
Sbjct: 1201 EKLTPLGYHLAQLPVDVHIGKMMLFGAILCCLDPVLTIAAAMSAGKSAFYSP--PDRREE 1258
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQ 877
A A+F LA +SD L ++ A+ W AK G+E +C+ + + +++Q
Sbjct: 1259 ANQARFGLAL---DKSDHLTLMNAYNGWLAAKADGREMQYCN---------DAIADLKRQ 1306
Query: 878 LQTELIKNGFIPEDVSS------------------------CSHNARVPGIIHAVLMAGL 913
L + GF+ + VS+ + NA+ +I A L GL
Sbjct: 1307 YAELLSEIGFLDQRVSTRLMNKQAKLAGRGSDGVKEATGARLNINAKNTRVIKAALCCGL 1366
Query: 914 YPMVARLRPPHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKT 955
YP V R+ P R+V+ G+ +V LHP S+NF ++
Sbjct: 1367 YPNVVRISSPET---RYVQVIPGSIAQPHNARDLKFYTRDDGRVFLHPSSVNFSVN---E 1420
Query: 956 DDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
D P +++ E + + VR ++V PLLL EI V
Sbjct: 1421 FDSPWLLFSEKVK-TSKVFVRQSSMVSHYPLLLFGREIDV 1459
Score = 196 bits (498), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 172/261 (65%), Gaps = 28/261 (10%)
Query: 153 KPKMSKAEI----AMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVL 208
+P++S+ ++ A ESL ++ ++ + ++ R +LP +S ++ I + +NQV++
Sbjct: 658 QPQVSEEQVRELSAQLTESLRAKQQRPDYI-EMQRVRQRLPAASKREEIIRVIRNNQVIV 716
Query: 209 ISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDN 266
++G TGCGK+TQVPQ+++E + ++ E C I+ TQPRRISA +A+R+S E+ E++G+
Sbjct: 717 LTGATGCGKSTQVPQYIMEDMIAQNEGGRCNIIVTQPRRISALGLAQRVSAEQCEDVGNT 776
Query: 267 IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEI 326
+GY+IRLES K++ ++FCT G+LLR RL +S + ++ ++HIIVDE+
Sbjct: 777 VGYQIRLESAKSKNTRLLFCTTGILLR--------RLTGSSGE--DKELRGISHIIVDEV 826
Query: 327 HERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF-----------GGCPVIQ 375
HER+ SDF+L ++++++ + +++ILMSATLDAD F+ YF G PVI
Sbjct: 827 HERNLDSDFLLIVLKELVRARKDIKVILMSATLDADLFAHYFASPGGRGAAAAVGAPVIS 886
Query: 376 VPGFTYPVKSFYLEDVLSILK 396
+PGFTYPV YLED L +L+
Sbjct: 887 IPGFTYPVGEHYLEDALELLR 907
>gi|195119115|ref|XP_002004077.1| GI19576 [Drosophila mojavensis]
gi|193914652|gb|EDW13519.1| GI19576 [Drosophila mojavensis]
Length = 934
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 257/463 (55%), Gaps = 30/463 (6%)
Query: 544 DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF----RDTSKFVIIPLH 599
D+ I L+ IC + DGAILVF+PG+ I++ + L NP R + +I PLH
Sbjct: 396 DIEFIASLIYYICNNKSDGAILVFVPGFSKISQLHN-TLKNPRSPLGQRWRNHLLIFPLH 454
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
SM+PSV+Q+ VF+ P G RK+I+ST IAET++TIDDVVYVI++GR K YD N+ +
Sbjct: 455 SMLPSVEQQSVFRPAPKGKRKVIISTIIAETSVTIDDVVYVINTGRTKVTDYDIETNIQS 514
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L+ WV+ A+ +QR GRAGR Q G+CY+L+S+ R A + + PEI R +E + L +K+
Sbjct: 515 LEECWVTHANTQQRKGRAGRVQPGVCYNLFSRAREALMSEVPTPEILRCKLEAIILSLKV 574
Query: 720 LDPNCNIED---FLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
L +I+D Q +DPPV T+ AI +L+ I AL +D K+T LG L L + P
Sbjct: 575 L----HIDDPYALFQTMIDPPVQRTVSTAINLLKRIEALDIDGKLTPLGMHLAKLPIDPQ 630
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
+ KM+ + L C+DP ++A A Y++PF P+ +++R AK +A G SD L
Sbjct: 631 VGKMILISALFRCVDPITSVAAALSYKNPFYTPLG--QEQRVDQAKRRMAQ--GMHSDHL 686
Query: 837 AVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DV 892
+ ++ + + ++ FC F+S + L M+ Q L F+ D
Sbjct: 687 MIHNTICNYRESVENHRDRDFCYNNFLSHMTLQQLERMKSQFSELLSNYKFLNSTNCLDH 746
Query: 893 SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGRRFVE---TAGGAKVRLHPHSLN 947
SS ++ ++P ++ A++ GLYP +A LR KN R + T G +V HP S+N
Sbjct: 747 SSNINSGKIP-LLRAIIGGGLYPNMAHLRKARQIKNRVRAIHNMTTDDGRRVNFHPSSVN 805
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
S + D VY + + +++ + T+V P+ L++
Sbjct: 806 ---SGETGFDSNYFVYYQRQKS-TDLYLLDATMVFPMALIIFG 844
Score = 192 bits (489), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 141/224 (62%), Gaps = 17/224 (7%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
++ + R E+R KLP I VD NQV+LI G TGCGKTTQVPQ LL+ +KG
Sbjct: 132 QNVDFRARYEDRMKLPTMGHAAEIIDAVDKNQVLLIVGSTGCGKTTQVPQLLLDDCIAKG 191
Query: 234 --ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLES-KGGKHSSIVFCTNGV 290
TC+IVCTQPRRISA +VAER+S ER E IG ++GY+IRLES K + +SI +CT GV
Sbjct: 192 IGSTCRIVCTQPRRISAITVAERVSYERVEPIGHSVGYQIRLESRKPRERASITYCTTGV 251
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
LL+ L S + R DEIHER +D ++A+++ +LP P L
Sbjct: 252 LLQQLQSDPLLRSVSVLLL--------------DEIHERSIETDLLMALLKIILPHRPTL 297
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++ILMSAT+ + F YF CP+ ++ G +PV+ FYLEDVL++
Sbjct: 298 KVILMSATVREEDFCNYFNRCPMFRIEGVMHPVEVFYLEDVLAM 341
>gi|46852276|ref|NP_766182.2| ATP-dependent RNA helicase Dhx29 [Mus musculus]
gi|81911463|sp|Q6PGC1.1|DHX29_MOUSE RecName: Full=ATP-dependent RNA helicase Dhx29; AltName: Full=DEAH
box protein 29
gi|34784758|gb|AAH57112.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Mus musculus]
gi|51896004|gb|AAH82319.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Mus musculus]
Length = 1365
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 179/485 (36%), Positives = 258/485 (53%), Gaps = 50/485 (10%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+NP I+L LI +LL + +D +GA+L+FLPG I + D L ++ F +
Sbjct: 839 MNPHKINLDLILELL--VYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFY-SE 895
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 896 RYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 955
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R D+ VPEI R+P+E
Sbjct: 956 HESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLE 1015
Query: 712 ELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEK 767
ELCL + C++ EDFL K LDPP I NA+ +L+ IGA +E K+T LG+
Sbjct: 1016 ELCLHIM----KCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQH 1071
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V+ + KML F + CL+P TLA + PF PI R A +S
Sbjct: 1072 LAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG-----RKDEADLAKSS 1126
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
L SD L + A+ WK A+Q G E +C + F++ + L ++++L +
Sbjct: 1127 LAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKA 1186
Query: 885 NGFIPEDVSSCSHNARVP---------GIIHAVLMAGLYPMVARLRPPH-----KNGRRF 930
GF SS S R ++ AVL AGLY V ++ +
Sbjct: 1187 AGF----SSSPSWEGRKGPQTLSFQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACM 1242
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
VETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1243 VETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRYT-RVYLRETTLITPFPVLLFG 1295
Query: 991 TEIAV 995
+I V
Sbjct: 1296 GDIEV 1300
Score = 189 bits (481), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 153/244 (62%), Gaps = 22/244 (9%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+ AE V SL R++ +++++ER +LP+ +D I T+ ++VV+++GETG G
Sbjct: 540 TSAEDLAPVRSLFRRLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 599
Query: 217 KTTQVPQFLLEHIWSK---GETCKIVCTQPRRISATSVAERISVERGENIGDN-----IG 268
K+TQVP FLLE + C IVCTQPRRISA S+A R+ E G G G
Sbjct: 600 KSTQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCG 659
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 660 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LADVSHVIVDEVHE 705
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+D+FS YF CP++++ G +YPV+ F+L
Sbjct: 706 RSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHL 765
Query: 389 EDVL 392
ED++
Sbjct: 766 EDIV 769
>gi|148686456|gb|EDL18403.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29, isoform CRA_b [Mus
musculus]
Length = 1366
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 179/485 (36%), Positives = 258/485 (53%), Gaps = 50/485 (10%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+NP I+L LI +LL + +D +GA+L+FLPG I + D L ++ F +
Sbjct: 840 MNPHKINLDLILELL--VYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFY-SE 896
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 897 RYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 956
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R D+ VPEI R+P+E
Sbjct: 957 HESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLE 1016
Query: 712 ELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEK 767
ELCL + C++ EDFL K LDPP I NA+ +L+ IGA +E K+T LG+
Sbjct: 1017 ELCLHIM----KCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQH 1072
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V+ + KML F + CL+P TLA + PF PI R A +S
Sbjct: 1073 LAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG-----RKDEADLAKSS 1127
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
L SD L + A+ WK A+Q G E +C + F++ + L ++++L +
Sbjct: 1128 LAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKA 1187
Query: 885 NGFIPEDVSSCSHNARVP---------GIIHAVLMAGLYPMVARLRPPH-----KNGRRF 930
GF SS S R ++ AVL AGLY V ++ +
Sbjct: 1188 AGF----SSSPSWEGRKGPQTLSFQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACM 1243
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
VETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1244 VETAQG-KAQVHPSSVNRDL-----QTYGWLLYQEKVRYT-RVYLRETTLITPFPVLLFG 1296
Query: 991 TEIAV 995
+I V
Sbjct: 1297 GDIEV 1301
Score = 189 bits (481), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 153/244 (62%), Gaps = 22/244 (9%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+ AE V SL R++ +++++ER +LP+ +D I T+ ++VV+++GETG G
Sbjct: 541 TSAEDLAPVRSLFRRLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 600
Query: 217 KTTQVPQFLLEHIWSK---GETCKIVCTQPRRISATSVAERISVERGENIGDN-----IG 268
K+TQVP FLLE + C IVCTQPRRISA S+A R+ E G G G
Sbjct: 601 KSTQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCG 660
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 661 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LADVSHVIVDEVHE 706
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+D+FS YF CP++++ G +YPV+ F+L
Sbjct: 707 RSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHL 766
Query: 389 EDVL 392
ED++
Sbjct: 767 EDIV 770
>gi|432105561|gb|ELK31758.1| ATP-dependent RNA helicase DHX29 [Myotis davidii]
Length = 1529
Score = 265 bits (678), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 179/485 (36%), Positives = 259/485 (53%), Gaps = 42/485 (8%)
Query: 535 LATVNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L +NP I+L L+ +LL R + +GA+L+FLPG I + D L A+ F +
Sbjct: 998 LLYMNPHKINLDLVLELLAYLDRSPQFRNMEGAVLIFLPGLAHIQQLYDLLSADRRF-SS 1056
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++ +I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VID+GR KE
Sbjct: 1057 GRYKVIALHSILSTQDQATAFTLPPRGVRKIVLATNIAETGITIPDVVFVIDTGRTKENK 1116
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
Y + +S+L ++VSKASA QR GRAGR + G C+ +Y++ R ++ VPEI R+P+
Sbjct: 1117 YHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMEYSVPEILRVPL 1176
Query: 711 EELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGE 766
EELCL + CN+ EDFL K LDPP I NA+ +L+ IGA L E K+T LG+
Sbjct: 1177 EELCLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELTEPKLTPLGQ 1232
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1233 HLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPI--GRKDEADLAKSALA 1290
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
+ SD L + A+ WK A+Q G E +C + F++ + L ++++L L+
Sbjct: 1291 T---ANSDHLTIYNAYLGWKKARQEGGPRSEVAYCRRNFLNRTSLLTLEDVKQEL-IRLV 1346
Query: 884 KNGFIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRF 930
K S+ ++ ++ AVL AGL V ++ +
Sbjct: 1347 KAAGFSASTSNGWEGSKATQTLSFQEVALLKAVLAAGLSDSVGKILCTRSVDVTEKLACM 1406
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
VETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1407 VETAQG-KAQVHPSSVNRDLQTYG-----WLLYQEKVR-YARVYLRETTLISPFPVLLFG 1459
Query: 991 TEIAV 995
+I V
Sbjct: 1460 GDIEV 1464
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 152/243 (62%), Gaps = 22/243 (9%)
Query: 158 KAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
KAE V +L +++ + +++ER +LP+ + I T+ ++VV+++G+TG GK
Sbjct: 703 KAEDLEPVRNLLRKLQSTPKYQGLLKERQQLPVFKHRSAIVETLKRHRVVVVAGDTGSGK 762
Query: 218 TTQVPQFLLEHIW---SKGETCKIVCTQPRRISATSVAERISVERGENIGDN-----IGY 269
+TQVP FLLE + C IVCTQPRRISA S+A R+ E G + G GY
Sbjct: 763 STQVPHFLLEDLLLNEPGTRKCNIVCTQPRRISAVSLATRVCDELGCDSGPGGRNSLCGY 822
Query: 270 KIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHER 329
+IR+ES+ + + +++CT GVLLR L G+ +++++H+IVDE+HER
Sbjct: 823 QIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LTSVSHVIVDEVHER 868
Query: 330 DRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
SDF+L I++ +L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LE
Sbjct: 869 SVQSDFLLVILKAILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLE 928
Query: 390 DVL 392
D++
Sbjct: 929 DIV 931
>gi|412986548|emb|CCO14974.1| predicted protein [Bathycoccus prasinos]
Length = 1670
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 186/560 (33%), Positives = 280/560 (50%), Gaps = 97/560 (17%)
Query: 513 IIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSED----------- 561
+ +KH+E SD +K+ + + + +N ELI+ L ++RK + +
Sbjct: 1066 LARKHLEENYSDDVKRSIQNVDESVLNYELIENTL-SAIIRKEFKEGMESIVPKGGKPME 1124
Query: 562 ----GAILVFLPGWEDINK-----TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFK 612
GA L+F+PG +I K + RLL + + +PL+ + + +Q+++F+
Sbjct: 1125 KDTYGAFLIFMPGQAEILKLIRVLEQSRLLE---VSEVGELDFLPLYGQLSAAEQRRIFQ 1181
Query: 613 RPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQ 672
+P G RKI+++TNIAET++TIDD+ YVID+GR KE YD +S L+ WVSKA AKQ
Sbjct: 1182 KPRLGVRKIVVATNIAETSVTIDDIRYVIDTGRQKEMRYDSERGLSCLEDCWVSKAQAKQ 1241
Query: 673 RAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI-EDFLQ 731
R GRAGR G C+ L+S+ + A+ Q PE+ R P++ L L +K + P + L
Sbjct: 1242 RRGRAGRTTPGACFRLFSRTQFANFEKTQAPEMLRTPLQSLVLNIKSMAPESGTAKGTLS 1301
Query: 732 KTLDPPVSVTIRNAIIVLQDIGALSL----DEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
L PP + A+ L+D+ A++L +E VT LG+ L + P + KML +A L+
Sbjct: 1302 LALTPPDENALDLAVQELKDLKAMALVNNTEEIVTPLGKHLTHMPCDPRLGKMLVYASLL 1361
Query: 788 DCLDPALTLACASDYRDPFTLPISPNE----KKRATAAKFELASLYGGQSDQLAVIAAFE 843
CLDP LT+A A R F P E KKRA A G+SD LAV+ AF+
Sbjct: 1362 GCLDPMLTIASAMSGRPLFYSPKDNREDAEKKKRAFAV---------GKSDHLAVVNAFD 1412
Query: 844 CWKNAKQ---RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP----------- 889
W NAK+ RG E FC + ++SS + +L R L GF+
Sbjct: 1413 GWLNAKKRGGRGAERRFCDENYLSSQALEAVLQSRVDFAQILSDLGFVSRNYALRVKRFG 1472
Query: 890 ---EDVSSCSH-------------NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVET 933
+D ++ S+ N+ V II A L+AGLYP + R + P ++ +T
Sbjct: 1473 RAKDDTTNSSYGNIGGGLKDEVDVNSNVSRIIKAALVAGLYPKLVRAQHPVA---KYAKT 1529
Query: 934 AGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
GGA +V LHP S+NF + K + L+ D + + V
Sbjct: 1530 IGGAVEKMASGREMKYYSRDVGRVFLHPTSVNFNVG--KYESTWLVYGDRVQ--TSKVFV 1585
Query: 976 RNCTVVGPLPLLLLATEIAV 995
R+CT+VG PLLL E+ V
Sbjct: 1586 RDCTMVGSYPLLLFGGELDV 1605
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 141/224 (62%), Gaps = 30/224 (13%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVCTQ 242
R+ LP S +D IT V+SN VV++SGETGCGK+TQVPQF+LE+ KG I+CTQ
Sbjct: 694 RNNLPASESRDKITKLVESNAVVVLSGETGCGKSTQVPQFILENAIFNQKGGETNIICTQ 753
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRISA +AER++ ER E +G +GY +RLESK K + ++FCT G+LLR L+S
Sbjct: 754 PRRISAIGLAERVANERDEKVGGVVGYSVRLESKTSKETRLLFCTTGILLRRLLSDPT-- 811
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
+ ++TH+I+DE+HER SD +L ++R ++ P+L+L+LMSAT DAD
Sbjct: 812 ------------LESVTHVILDEVHERSVDSDVLLLLLRRVVQKRPNLKLVLMSATADAD 859
Query: 363 RFSQYFGG--------------CPVIQVPGFTYPVKSFYLEDVL 392
F+ YF I +PGFT+PVK +YLEDV
Sbjct: 860 LFADYFQKPSKRANENAIKAVETSKITIPGFTHPVKEYYLEDVF 903
>gi|397495260|ref|XP_003818477.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Pan paniscus]
Length = 1035
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 459 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 518
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 519 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 577
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 578 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 637
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 638 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 697
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 698 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 752
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 753 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 811
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 812 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 870
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 871 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 927
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 928 FVRDSSQVHPLAVLLLT 944
Score = 210 bits (534), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 199 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 257
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 258 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 317
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 318 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 377
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 378 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 423
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 424 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 478
>gi|293345175|ref|XP_002725935.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Rattus norvegicus]
gi|392345365|ref|XP_002729053.2| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Rattus norvegicus]
Length = 1366
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/484 (36%), Positives = 257/484 (53%), Gaps = 48/484 (9%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+NP I+L LI +LL + +D +GA+L+FLPG I + D LL+N +
Sbjct: 840 MNPHKINLDLILELL--VYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSE 896
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 897 RYQLIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 956
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R ++ VPEI R+P+E
Sbjct: 957 HESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLEYSVPEILRVPLE 1016
Query: 712 ELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEK 767
ELCL + C++ EDFL K LDPP I NA+ +L+ IGA E K+T LG+
Sbjct: 1017 ELCLHIM----KCDLGSPEDFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQH 1072
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V+ + KML F + CL+P TLA + PF PI R A +S
Sbjct: 1073 LAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG-----RKDEADLAKSS 1127
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
L SD L + A+ WK A+Q G E +C + F++ + L ++++L +
Sbjct: 1128 LAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVRA 1187
Query: 885 NGFIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFV 931
GF S+ + P ++ AVL AGLY V ++ + V
Sbjct: 1188 AGF---SSSTSWEGKKGPQALSFQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMV 1244
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
ETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1245 ETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRY-ARVYLRETTLITPFPVLLFGG 1297
Query: 992 EIAV 995
+I V
Sbjct: 1298 DIEV 1301
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 151/242 (62%), Gaps = 22/242 (9%)
Query: 159 AEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
AE V +L R++ +++++ER +LP+ + I T+ ++VV+++GETG GK+
Sbjct: 543 AEDLEPVRNLFRRLQSTPKYQRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKS 602
Query: 219 TQVPQFLLEHIW---SKGETCKIVCTQPRRISATSVAERISVERGENIGDN-----IGYK 270
TQVP FLLE + C IVCTQPRRISA S+A R+ E G G GY+
Sbjct: 603 TQVPHFLLEDLLLNDCGARKCNIVCTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQ 662
Query: 271 IRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HER
Sbjct: 663 IRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LADVSHVIVDEVHERS 708
Query: 331 RYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
SDF+L I++++L L LILMSAT+D+D+FS YF CP++++ G +YPV+ F+LED
Sbjct: 709 VQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLED 768
Query: 391 VL 392
++
Sbjct: 769 IV 770
>gi|20336290|ref|NP_055781.2| putative ATP-dependent RNA helicase DHX30 isoform 2 [Homo sapiens]
gi|31455196|gb|AAH15029.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Homo sapiens]
gi|54611158|gb|AAH38417.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Homo sapiens]
gi|410213844|gb|JAA04141.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Pan troglodytes]
gi|410258404|gb|JAA17169.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Pan troglodytes]
gi|410290864|gb|JAA24032.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Pan troglodytes]
gi|410351727|gb|JAA42467.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Pan troglodytes]
Length = 1155
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 579 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 638
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 639 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 697
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 698 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 757
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 758 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 817
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 818 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 872
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 873 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 931
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 932 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 990
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 991 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1047
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1048 FVRDSSQVHPLAVLLLT 1064
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 319 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 377
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 378 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 437
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 438 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 497
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 498 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 543
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 544 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 598
>gi|426340365|ref|XP_004034100.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Gorilla gorilla gorilla]
Length = 1155
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 579 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 638
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 639 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 697
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 698 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 757
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 758 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 817
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 818 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 872
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 873 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 931
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 932 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 990
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 991 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1047
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1048 FVRDSSQVHPLAVLLLT 1064
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP ++ P +L ++ K G D I KP + E A +V S
Sbjct: 319 IETFLNHYPVENSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 377
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 378 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 437
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 438 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 497
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 498 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 543
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 544 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 598
>gi|380784351|gb|AFE64051.1| putative ATP-dependent RNA helicase DHX30 isoform 2 [Macaca mulatta]
gi|383411837|gb|AFH29132.1| putative ATP-dependent RNA helicase DHX30 isoform 2 [Macaca mulatta]
gi|384939604|gb|AFI33407.1| putative ATP-dependent RNA helicase DHX30 isoform 2 [Macaca mulatta]
Length = 1155
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 579 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 638
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 639 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 697
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 698 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 757
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 758 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 817
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 818 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 872
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 873 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 931
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 932 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 990
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 991 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1047
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1048 FVRDSSQVHPLAVLLLT 1064
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 153/225 (68%), Gaps = 17/225 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
+ +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE + +G C +
Sbjct: 388 VWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNV 447
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVS 297
+ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 448 IITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQS 507
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P+ + VS H+IVDE+HERD +DF+L +++ + P LRL+LMSA
Sbjct: 508 N-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 553
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
T D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 554 TGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 598
>gi|118103807|ref|XP_424728.2| PREDICTED: ATP-dependent RNA helicase DHX29 [Gallus gallus]
Length = 1372
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 242/455 (53%), Gaps = 36/455 (7%)
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
+GA+L+FLPG I + D + + F + +I LHS++ + Q F PP G RK
Sbjct: 868 EGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIALHSVLSTQDQAAAFTVPPLGVRK 927
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
I+L+TNIAET ITI DVV+VIDSGR KE Y + +S+L+ ++VSKASA QR GRAGR
Sbjct: 928 IVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGRV 987
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI---EDFLQKTLDPP 737
+ G C+ +Y++ R S ++ VPEI R+P+EELCL + CN+ EDFL + LDPP
Sbjct: 988 RDGFCFRMYTRDRFESFMEYSVPEILRVPLEELCLHIM----KCNLGSPEDFLSRALDPP 1043
Query: 738 VSVTIRNAIIVLQDIGALSLDE-KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
I NA+ +L+ IGA L+E K+T LG+ L L V+ + KML F + CLDP TL
Sbjct: 1044 QPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1103
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG---Q 853
A + PFT PI R A +S+ SD L + A+ WK A+Q G
Sbjct: 1104 AAVMTEKSPFTTPIG-----RKDEADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHRA 1158
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDVSSCSHNARVP-------GII 905
E +C + F++ + L ++++L + GF P N ++
Sbjct: 1159 EMTYCRRNFLNRTSLLTLEDVKQELIKLVRAAGFTAPTTQHRLDGNGGTQSLSLHEIALL 1218
Query: 906 HAVLMAGLYPMVARLRPPH-----KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
AVL AGLY V ++ + VETA G K ++HP S+N L
Sbjct: 1219 KAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQG-KAQVHPSSVNRDLQVHG-----W 1272
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
++Y E R +++R T++ P P+LL +I V
Sbjct: 1273 LLYQEKVRY-AKVYLRETTLISPFPILLFGGDIEV 1306
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 152/233 (65%), Gaps = 21/233 (9%)
Query: 167 SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL 226
+L +++ + ++ ++ER +LP+ + I T+ ++VV+++GETG GK+TQVP FLL
Sbjct: 553 NLFRKLQSSSRYQKFLKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLL 612
Query: 227 EHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGK 279
E + T C IVCTQPRRISA S+A R+ E G G GY+IR+ES+ G+
Sbjct: 613 EDLLLDEGTRKCNIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGE 672
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
+ +++CT GVLLR L G+ +S+++H+IVDE+HER +SDF+L I
Sbjct: 673 ATRLLYCTTGVLLRKLQEDGL--------------LSSISHVIVDEVHERSVHSDFLLVI 718
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F++EDV+
Sbjct: 719 LKEILHKRSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYPVEVFHVEDVI 771
>gi|390475008|ref|XP_003734884.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Callithrix jacchus]
Length = 1155
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 579 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 638
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 639 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 697
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 698 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 757
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 758 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 817
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 818 EIGVLDHREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 872
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 873 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 931
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 932 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 990
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 991 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1047
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1048 FVRDSSQVHPLAVLLLT 1064
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP + E A +V S
Sbjct: 319 IETFLNHYPVDSSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 377
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 378 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEHHPVVVISGDTGCGKTTRIPQLLLERYV 437
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 438 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 497
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 498 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 543
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 544 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 598
>gi|119585237|gb|EAW64833.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_a [Homo
sapiens]
Length = 1265
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 267/496 (53%), Gaps = 31/496 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 689 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 748
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 749 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 807
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 808 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 867
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 868 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 927
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 928 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 982
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 983 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 1041
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 1042 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1100
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1101 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1157
Query: 974 HVRNCTVVGPLPLLLL 989
VR+ + V PL +LLL
Sbjct: 1158 FVRDSSQVHPLAVLLL 1173
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 429 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 487
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 488 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 547
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 548 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 607
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 608 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 653
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 654 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 708
>gi|355559678|gb|EHH16406.1| hypothetical protein EGK_11684 [Macaca mulatta]
gi|380784353|gb|AFE64052.1| putative ATP-dependent RNA helicase DHX30 isoform 1 [Macaca mulatta]
gi|383411839|gb|AFH29133.1| putative ATP-dependent RNA helicase DHX30 isoform 1 [Macaca mulatta]
gi|384939606|gb|AFI33408.1| putative ATP-dependent RNA helicase DHX30 isoform 1 [Macaca mulatta]
Length = 1194
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 153/225 (68%), Gaps = 17/225 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
+ +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE + +G C +
Sbjct: 427 VWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNV 486
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVS 297
+ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 487 IITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQS 546
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P+ + VS H+IVDE+HERD +DF+L +++ + P LRL+LMSA
Sbjct: 547 N-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
T D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>gi|428164561|gb|EKX33582.1| hypothetical protein GUITHDRAFT_81252 [Guillardia theta CCMP2712]
Length = 819
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/405 (38%), Positives = 240/405 (59%), Gaps = 26/405 (6%)
Query: 538 VNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+N +LI VL+ LLRK +D E G +L+FLPG +I + D+L+A+ F D KFV
Sbjct: 284 INYDLICDVLL--LLRK-SLDDEKASPGGVLIFLPGIGEIMQLYDQLMASSVFSDRKKFV 340
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
+ HS +P +Q+++F +PPP +KI+++TNIAET+ITIDD+ YVID+GR+KE Y+
Sbjct: 341 VHAAHSSLPPEEQRRIFVKPPPHVQKIVIATNIAETSITIDDIAYVIDTGRVKETRYNER 400
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD-FQVPEIKRIPIEEL 713
+ L +W+ +AS +QRAGRAGR QAG C+HLY+++R+AS D + PE++R+P+EEL
Sbjct: 401 AKMRLLVETWIDRASMRQRAGRAGRVQAGKCFHLYTRVRSASYFDEHKTPEMRRVPLEEL 460
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
CLQ+ L + ++ FL LDPP ++ A+ L D+ A+ + +T LG+ L L V
Sbjct: 461 CLQI-LSMGHRDVASFLGSALDPPSETAVKVAMQTLSDVQAVDEEGGLTALGQHLSRLPV 519
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ- 832
P + K+L + CL+P LT+A Y+ PF I + A+ +LA GQ
Sbjct: 520 DPHIGKLLIMGCIFSCLNPILTIAACCSYKMPFLTSI--ERRGLVDDARKKLA----GQH 573
Query: 833 --SDQLAVIAAFECWKNAK--QRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
SD L AA++ W A ++G++ C QY +S + + +R Q + L GFI
Sbjct: 574 PVSDLLVASAAYDMWVEASRGEKGKQQQVCRQYSMSQATLIQIRDLRSQFKDLLRSIGFI 633
Query: 889 ------PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNG 927
ED +S + N+R I+ +++ AGLYP + +++ + G
Sbjct: 634 NKVGDVDEDKAS-NANSRSKPILCSIIFAGLYPNLVQVQEGDRGG 677
Score = 203 bits (516), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 145/223 (65%), Gaps = 23/223 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETC 236
+++ E R LPI S ++ + S + SN V +I GETGCGK+TQVPQ +L+ S +GE C
Sbjct: 8 QRLWEGRKLLPIYSKQEEMLSAIRSNTVTIIVGETGCGKSTQVPQMILDEFLSQRRGEGC 67
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDN---IGYKIRLESKGGKHSSIVFCTNGVLLR 293
+I+CTQPRR++A VAER++ ERGE G ++IR+ES + + I+FCT G+LLR
Sbjct: 68 RIICTQPRRVAAIGVAERVAAERGETPGAGGALCAHQIRMESTRTEDTRILFCTTGILLR 127
Query: 294 LLVSQGVSRLKEASNKPAKDD--VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
L +DD + ++H+IVDE HERD DF+L I+R M+ P +R
Sbjct: 128 RL----------------QDDPQLEGISHVIVDEAHERDVLCDFLLVILRGMVERRPDMR 171
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L++MSAT+DADRFS+YF PV VPG T+PV+ +LEDVL +
Sbjct: 172 LVIMSATMDADRFSRYFFDAPVFTVPGRTFPVEDLFLEDVLEL 214
>gi|426340363|ref|XP_004034099.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Gorilla gorilla gorilla]
Length = 1194
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP ++ P +L ++ K G D I KP + E A +V S
Sbjct: 358 IETFLNHYPVENSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>gi|20336294|ref|NP_619520.1| putative ATP-dependent RNA helicase DHX30 isoform 1 [Homo sapiens]
gi|74758997|sp|Q7L2E3.1|DHX30_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|18043040|gb|AAH20126.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Homo sapiens]
gi|119585238|gb|EAW64834.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_b [Homo
sapiens]
gi|119585239|gb|EAW64835.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_b [Homo
sapiens]
gi|168278743|dbj|BAG11251.1| ATP-dependent RNA helicase DHX30 [synthetic construct]
Length = 1194
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 358 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>gi|123995187|gb|ABM85195.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [synthetic construct]
Length = 1194
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 210 bits (534), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 358 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>gi|410213842|gb|JAA04140.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Pan troglodytes]
gi|410258402|gb|JAA17168.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Pan troglodytes]
gi|410290862|gb|JAA24031.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Pan troglodytes]
gi|410351725|gb|JAA42466.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Pan troglodytes]
Length = 1194
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 358 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>gi|390475006|ref|XP_003734883.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Callithrix jacchus]
Length = 1194
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDHREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP + E A +V S
Sbjct: 358 IETFLNHYPVDSSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEHHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>gi|297285865|ref|XP_001113231.2| PREDICTED: putative ATP-dependent RNA helicase DHX30-like isoform 4
[Macaca mulatta]
Length = 1265
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 267/496 (53%), Gaps = 31/496 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 689 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 748
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 749 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 807
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 808 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 867
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 868 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 927
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 928 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 982
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 983 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 1041
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 1042 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1100
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1101 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1157
Query: 974 HVRNCTVVGPLPLLLL 989
VR+ + V PL +LLL
Sbjct: 1158 FVRDSSQVHPLAVLLL 1173
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 153/225 (68%), Gaps = 17/225 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
+ +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE + +G C +
Sbjct: 498 VWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNV 557
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVS 297
+ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 558 IITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQS 617
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P+ + VS H+IVDE+HERD +DF+L +++ + P LRL+LMSA
Sbjct: 618 N-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 663
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
T D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 664 TGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 708
>gi|295829042|gb|ADG38190.1| AT2G30800-like protein [Capsella grandiflora]
gi|295829044|gb|ADG38191.1| AT2G30800-like protein [Capsella grandiflora]
Length = 173
Score = 263 bits (673), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 132/173 (76%), Positives = 152/173 (87%), Gaps = 1/173 (0%)
Query: 497 TALQLGEQENQPEVAQIIKKHMENALSDSMKQQ-LLDKYLATVNPELIDLVLIEQLLRKI 555
TAL+L E ENQ E AQII++H +N+ S+S + Q LLDKYLAT+NPE +D+ LI QL+RKI
Sbjct: 1 TALELAETENQLEAAQIIREHADNSQSNSQQGQQLLDKYLATINPEQVDVSLILQLMRKI 60
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
C DSEDGAILVFLPGW+DINKTR RLL NPFF D++KF II LHSMVP+ +QKKVF RPP
Sbjct: 61 CGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPP 120
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
GCRKI+L+TNIAE+A+TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA
Sbjct: 121 RGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 173
>gi|40788976|dbj|BAA74913.2| KIAA0890 protein [Homo sapiens]
Length = 1210
Score = 263 bits (673), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 634 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 693
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 694 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 752
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 753 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 812
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 813 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 872
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 873 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 927
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 928 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 986
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 987 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1045
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1046 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1102
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1103 FVRDSSQVHPLAVLLLT 1119
Score = 210 bits (534), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 374 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 432
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 433 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 492
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 493 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 552
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 553 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 598
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 599 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 653
>gi|327262839|ref|XP_003216231.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Anolis
carolinensis]
Length = 1369
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 253/480 (52%), Gaps = 41/480 (8%)
Query: 538 VNPELIDLVLIEQLL----RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+ LI +LL R + +GA+L+FLPG I + D + + F +
Sbjct: 843 MNPRKINFDLILELLAFLDRVPQFKNVEGAVLIFLPGLAHIQQLYDLIATDRRFDIRQRH 902
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PP G RKI+L+TNIAET ITI DVV+VIDSGR KE Y
Sbjct: 903 QLIALHSVLSTQDQAAAFTLPPFGIRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHE 962
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L+ ++VSKASA QR GRAGR + G C+ +Y++ R S ++ VPEI R+P+EEL
Sbjct: 963 SSQMSSLEETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFLEYSVPEILRVPLEEL 1022
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ E+FL K LDPP + NA+ +L+ IGA L E K+T LG+ L
Sbjct: 1023 CLHIM----KCNLGSPEEFLSKALDPPQPQVVANAMNLLRKIGACELSEPKLTPLGQHLA 1078
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP T+A + PFT PI R A +SL
Sbjct: 1079 SLPVNVKIGKMLIFGAIFGCLDPVATIAAVMTEKSPFTTPIG-----RKDEADLAKSSLA 1133
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+ G E +C + F++ + L ++++L + G
Sbjct: 1134 LANSDHLTIYKAYLGWKKARHEGGYRAEMTYCRRNFLNRTSLLTLEDVKQELIRVVRLAG 1193
Query: 887 FIPEDVSSCSHNA------RVPGIIHAVLMAGLYPMVARLRPPH-----KNGRRFVETAG 935
F SC H + ++ AVL AGLY V ++ + ETA
Sbjct: 1194 FA---APSCHHEGTHSLSLQDMVLLKAVLTAGLYDNVGKILFTKSVDITEKLACVAETAQ 1250
Query: 936 GAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
G K ++HP S+N L ++Y E R ++++ T++ P P+LL +I V
Sbjct: 1251 G-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRY-AKVYLKETTLISPFPILLFGGDIEV 1303
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 151/236 (63%), Gaps = 26/236 (11%)
Query: 167 SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL 226
+L +++ +++++ER +LP+ + + T+ ++VV+++GETG GK+TQVP FLL
Sbjct: 554 TLFKKLQSTPKYQKLLKEREQLPVFKHRHSLIETLKKHRVVVVAGETGSGKSTQVPHFLL 613
Query: 227 EHIWSKGET---CKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGG 278
E + + C IVCTQPRRISA S+A R+ E G G GY+IR+ES+ G
Sbjct: 614 EDLLRNDHSLTKCNIVCTQPRRISAVSLATRVCEELGCEGGPGGKNSLCGYQIRMESRTG 673
Query: 279 KHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDV--SALTHIIVDEIHERDRYSDFM 336
+ + +++CT GVLLR L ++D+ S ++H++VDE+HER SDF+
Sbjct: 674 EATRLLYCTTGVLLRKL----------------QEDILLSNVSHVLVDEVHERSVQSDFL 717
Query: 337 LAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
L I+R++L L LILMSAT+D+++FS YF CP+I++ G +YPV+ F++E+V+
Sbjct: 718 LIILREILHKRSDLHLILMSATVDSEKFSSYFTHCPIIRISGRSYPVEVFHIEEVI 773
>gi|195434018|ref|XP_002065000.1| GK15229 [Drosophila willistoni]
gi|194161085|gb|EDW75986.1| GK15229 [Drosophila willistoni]
Length = 931
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 256/470 (54%), Gaps = 38/470 (8%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP------FFRDTSKFVIIPLHS 600
I L+ IC +GAILVF+P +E I++ + LL P +RD + ++ PLHS
Sbjct: 399 FIVDLIYYICERKPEGAILVFMPSFERISQLFN-LLEKPKSPKGEHWRD--QLILHPLHS 455
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
++PSV+Q+ +F+R P G RK+I+ST IAET++TIDDVVYVI++GR K SYD +N+ L
Sbjct: 456 LMPSVEQQAIFRRVPQGKRKVIISTIIAETSVTIDDVVYVINTGRTKTSSYDIESNIQML 515
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
+ WV+ A+ +QR GRAGR GICY+L+S+ R + + PEI R +E + L +KLL
Sbjct: 516 EEDWVTLANTQQRKGRAGRVSPGICYNLFSRAREHRMAEIPTPEILRCKLESIILSLKLL 575
Query: 721 ---DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
DP+ FLQ ++ P I N I +L+ I L +T LG L L + P M
Sbjct: 576 HIDDPH----QFLQTVINAPPKEAINNGIQLLKRIECLDCSGTLTPLGMHLAKLPIDPQM 631
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
KM+ + L CLDP + A A Y+ PF P+ ++KRA K + A +SD L
Sbjct: 632 GKMILMSALFGCLDPITSAAAALSYKTPFYSPLG--QEKRADEVKRQFAR--NMRSDHLM 687
Query: 838 VIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSH 897
+ C++ +Q +E +C F+S +N L M+ Q L K F+ ++C H
Sbjct: 688 IHNTVVCFRETRQACREREYCYNNFLSITTLNQLERMKNQFSESLHKYKFL--KYANCQH 745
Query: 898 -----NARVPGIIHAVLMAGLYPMVARLRPPH--KNGRRFVE---TAGGAKVRLHPHSLN 947
N+ ++ A++ AGLYP +A LR KN R + T G +V HP S+N
Sbjct: 746 PDSNKNSEKITLLRAIIGAGLYPNMAHLRKARQLKNRVRAIHQMTTDDGRRVNFHPSSVN 805
Query: 948 F-KLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVA 996
+ SF+ VY + + + +++ + T+V P+ LL+ ++A+
Sbjct: 806 SGEFSFESG----YFVYFQRQKSN-DLYLLDSTMVFPMALLIFGDDVAMG 850
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 139/213 (65%), Gaps = 17/213 (7%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQ 242
R KLP ++ I V NQV+LI G TGCGKTTQVPQ LL++ S+ G +C+I+CTQ
Sbjct: 144 RLKLPTMAYSQHIIEAVKQNQVILIVGSTGCGKTTQVPQILLDYEISQRTGSSCRIICTQ 203
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLES-KGGKHSSIVFCTNGVLLRLLVSQGVS 301
PRRISA +V+ER++ ERGEN+G ++GY+IRLES K SI FCT GVLL
Sbjct: 204 PRRISAITVSERVAYERGENLGQSVGYQIRLESCKARDRGSINFCTTGVLL--------- 254
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
++ + P VS L I+DEIHER +D ++A+++ +LP P L++ILMSAT+
Sbjct: 255 --QQMQSDPLLHGVSVL---ILDEIHERSMETDMLMALLKVILPHRPELKVILMSATVKE 309
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
F YF CP+ ++ G +PV+ YLED+LS+
Sbjct: 310 QDFCDYFNKCPMFRIGGVMFPVEVLYLEDILSL 342
>gi|452839502|gb|EME41441.1| hypothetical protein DOTSEDRAFT_73756 [Dothistroma septosporum
NZE10]
Length = 727
Score = 263 bits (672), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/472 (35%), Positives = 253/472 (53%), Gaps = 28/472 (5%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN-PF---FRDTSKFVIIP 597
L+ L LI ++ I + DGAILVFLPG ++I T++ L PF F DT KF I
Sbjct: 159 LVPLPLISAVIAHIIQTTSDGAILVFLPGLQEITGTQNILTTRRPFGVDFSDTGKFKICL 218
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS VP +Q++V PPPG RKIIL+TNIAET+IT+ DV YV+D+G+++EK YD +
Sbjct: 219 LHSAVPPAEQREVIDPPPPGRRKIILATNIAETSITVPDVKYVVDAGKLREKKYDQVTRI 278
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
+ LQ +W S ++ +QRAGRAGR Q G Y LYS+ R + +PEI R ++E CL +
Sbjct: 279 TKLQCTWASNSNVRQRAGRAGRVQEGFYYGLYSKQRREQMTVSGLPEILRSDLQETCLSI 338
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K + FL + ++PP + + A+ LQ I AL+ ++++T LG L L VHP +
Sbjct: 339 KAQGFEEPVATFLSQAIEPPPAGAVEIAVENLQAIEALTAEQELTALGRVLSTLPVHPAL 398
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
+KM+ I+ CLDP L L+ S R F PIS + K+ SD LA
Sbjct: 399 AKMVLLGIVFRCLDPMLVLSAMSSERPLFVNPISSRAMAKDAQKKYA-----RDDSDHLA 453
Query: 838 VIAAFECWKNAKQR-GQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE---- 890
+ AF K+ + R G++A F+ G + KQ++ L ++ +P+
Sbjct: 454 LYHAFTELKSVRSRAGEDAARRHAMNNFLHFGAFKGVTQTAKQIEEVLTEHRLLPKIGQR 513
Query: 891 DVSSCSH-------NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHP 943
+ S H N+ ++ +L+AGL+P + RP +K R T GA + HP
Sbjct: 514 ERSMTPHGGAQLNQNSSNTALVKGLLIAGLHPNLGVKRPGNKISRFRTPTEDGACI--HP 571
Query: 944 HSLNFKLSFKKTDDCPLMVYDEITRGDGG--MHVRNCTVVGPLPLLLLATEI 993
S N K ++ +D L Y + + G + +R+ T+V PL +LL ++
Sbjct: 572 GSHNSKKTWPAGEDF-LYTYSTLAKSVNGDQLFMRDTTLVTPLMVLLFGGKL 622
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 9/96 (9%)
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL-----RLILMSATLDADRFSQYFG--- 369
++H+++DE+HERD DF+L +++ + S +++LMSATLD + F+ Y
Sbjct: 4 ISHLVIDEVHERDINIDFLLILLKKAVKSRLAAGKTVPKVVLMSATLDPELFANYLAEDQ 63
Query: 370 -GCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLD 404
CP++ VPG T+PV+ YL+++L L+ + + L+
Sbjct: 64 SKCPILSVPGRTFPVQESYLDEILYGLRQHDEHELE 99
>gi|20072312|gb|AAH26474.1| Dhx57 protein, partial [Mus musculus]
Length = 524
Score = 263 bits (672), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 261/458 (56%), Gaps = 59/458 (12%)
Query: 579 DRLLANPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
++L +N F R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDD
Sbjct: 3 EQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDD 62
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAA 695
VVYVIDSG+MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S
Sbjct: 63 VVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNH 122
Query: 696 SLPDFQVPEIKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIG 753
L Q+PEI+R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+G
Sbjct: 123 QLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLG 182
Query: 754 ALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPN 813
AL+ DEK+T LG L L V + K++ + CLDPALT+A + ++ PF P +
Sbjct: 183 ALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPW--D 240
Query: 814 EKKRATAAKFELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNML 871
+K+ A K E A SD LA++ A++ W+ + K+ + ++ +C Q F+S + +
Sbjct: 241 KKEEANQKKLEFAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEM 297
Query: 872 LGMRKQLQTELIKN-GFIPEDVSS--------------------CSHNARVPGIIHAVLM 910
+++Q TEL+ + GF+ E + + + NA P +I AVL
Sbjct: 298 ASLKRQF-TELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLC 356
Query: 911 AGLYPMVARLRPPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSF 952
A LYP V +++ P +F +T+ G V +HP S+N+++
Sbjct: 357 AALYPNVVQVKTPEG---KFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQV-- 411
Query: 953 KKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+ D P ++Y E + + +R+C++V PL+L
Sbjct: 412 -RHFDSPYLLYHEKIK-TSRVFIRDCSMVSVYPLVLFG 447
>gi|26390418|dbj|BAC25894.1| unnamed protein product [Mus musculus]
Length = 621
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 260/485 (53%), Gaps = 50/485 (10%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+NP I+L LI +LL + +D +GA+L+FLPG I + D L ++ F +
Sbjct: 95 MNPHKINLDLILELL--VYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFY-SE 151
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 152 RYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 211
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R D+ VPEI R+P+E
Sbjct: 212 HESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLE 271
Query: 712 ELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEK 767
ELCL + C++ EDFL K LDPP I NA+ +L+ IGA +E K+T LG+
Sbjct: 272 ELCLHIM----KCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQH 327
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V+ + KML F + CL+P TLA + PF PI K A AK +S
Sbjct: 328 LAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPI--GRKDEADLAK---SS 382
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
L SD L + A+ WK A+Q G E +C + F++ + L ++++L +
Sbjct: 383 LAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKA 442
Query: 885 NGFIPEDVSSCSHNARVP---------GIIHAVLMAGLYPMVARLRPPH-----KNGRRF 930
GF SS S R ++ AVL AGLY V ++ +
Sbjct: 443 AGF----SSSPSWEGRKGPQTLSFQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACM 498
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
VETA G K ++HP S+N + ++Y E R +++R T++ P P+LL
Sbjct: 499 VETAQG-KAQVHPSSVN-----RDLQTYGWLLYQEKVRYT-RVYLRETTLITPFPVLLFG 551
Query: 991 TEIAV 995
+I V
Sbjct: 552 GDIEV 556
>gi|324500369|gb|ADY40175.1| ATP-dependent RNA helicase A [Ascaris suum]
Length = 1452
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 254/463 (54%), Gaps = 30/463 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
I +IE LL I ++G++L+FLPGW I+ L +P F + S+F+++PLHS +
Sbjct: 635 ISFEIIEALLMDITNQGDEGSVLIFLPGWNIISMLLSFLTNHPVFSNQSRFMVLPLHSQL 694
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
V+Q++VF+R P RKIILSTNIAET++TI+DVV+VIDS + KEK Y +NN+ +
Sbjct: 695 TGVEQRRVFERVPSNMRKIILSTNIAETSVTINDVVFVIDSCKAKEKMYTSHNNMVHYAT 754
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W SK + +QR GRAGR + G C+HL S+ R SL +++ E+ R P+ E+ L +KLL
Sbjct: 755 VWASKTNLQQRRGRAGRVRDGFCFHLCSRSRYESLEEYRTAEMLRTPLHEIALTIKLLGL 814
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+I DFL K ++PP + A ++L+++ AL + ++TELG L L + P++ K L
Sbjct: 815 G-SIGDFLAKAVEPPPLDAVIEAEVLLREMSALDSNSELTELGRILARLPIDPILGKTLV 873
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF--ELASLYGGQ-SDQLAVI 839
FA + D TLA AS + PF + ++K + SL G + SD +A+I
Sbjct: 874 FATALGVGDLMATLAAASSFNTPFV-------SREGISSKLTRQQRSLSGNRFSDHVALI 926
Query: 840 AAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG-------FIPE 890
F WK+A +RG E F +Y VS V+NM ++QL E++ G F+P
Sbjct: 927 CLFNRWKHASERGPLSERQFYERYSVSPAVLNMTADAKRQL-VEVLTGGSGFAESLFVPA 985
Query: 891 DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN--F 948
VS+ + + II ++L+ YP V LR +R V T A + S+N F
Sbjct: 986 FVSNTDPDPELDLII-SLLVYAYYPNVCHLR-----DKRRVYTLELATALMSKQSVNTPF 1039
Query: 949 KLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
S PL V+ E R + + + + PL LLL +
Sbjct: 1040 HSSEALNFPSPLFVFSEKLRTK-VISCKQLSNITPLQLLLFGS 1081
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 157/237 (66%), Gaps = 23/237 (9%)
Query: 163 MKVESLTSRI----EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
M +E++++R+ +K L+ I E+R LP+ ++DVI T+ N V LI GETGCGK+
Sbjct: 356 MTLEAISARLLEEEQKRILLQSIREQRESLPVFHYRDVIIETIAGNPVTLIKGETGCGKS 415
Query: 219 TQVPQFLLEH--IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q+LLE + ++G + TQPRRISA ++AER++ ERGE +G +IGY +R ES
Sbjct: 416 TQICQYLLEDFVLKNRGADFAAIVTQPRRISAITLAERVAEERGEVLGTSIGYGVRFESV 475
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +++F T GVLLR L S + ++H+IVDEIHERD +DF
Sbjct: 476 HPRPYGAVMFMTVGVLLRRLES----------------GLRGVSHVIVDEIHERDINTDF 519
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
L ++R+M+ YP +R++LMSAT+D D F+ YFG CP+IQ+ G T+PV+ F+LED++
Sbjct: 520 ALIVLREMVRQYPEIRVVLMSATIDTDLFTNYFGTCPIIQLQGRTFPVQHFFLEDIV 576
>gi|119585240|gb|EAW64836.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_c [Homo
sapiens]
Length = 1142
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 264/497 (53%), Gaps = 32/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINRATRLRSR----WLTYFMAVKSNGSV 1085
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1086 FVRDSSQVHPLAVLLLT 1102
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 358 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>gi|395516112|ref|XP_003762238.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Sarcophilus harrisii]
Length = 1192
Score = 263 bits (671), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 267/497 (53%), Gaps = 33/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWE 572
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I + G IL FLPGW+
Sbjct: 618 VKEHYLEDILAKLGKHQHRHRHHESEDECALDLDLMTDLVLHIDARGDPGGILCFLPGWQ 677
Query: 573 DINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAI 632
+I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET+I
Sbjct: 678 EIKGVQQRL-QEALGSYESKYLILPVHSNIPMMDQKAIFQQPPTGVRKIVLATNIAETSI 736
Query: 633 TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQL 692
T++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+ +
Sbjct: 737 TVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 796
Query: 693 RAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDI 752
R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ+I
Sbjct: 797 RLEKMAPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPDIKAVDEAVILLQEI 856
Query: 753 GALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLPIS 811
G L E +T LG++L +S P ++K + A + CL P L ++C + RDPF S
Sbjct: 857 GVLDQREFLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF----S 910
Query: 812 PNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSGVM 868
+ + RA K + + SD LA + A W+ + R + + + + +
Sbjct: 911 SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSL 970
Query: 869 NMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVARLR 921
+ G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + ++R
Sbjct: 971 RFIHGLIKQF-SENIYEAFLVGKPSDCTLPSAQCNQYSEEEELVKGVLMAGLYPNLIQVR 1029
Query: 922 PP--------HKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
N + AG + LH ++N + + ++ + Y + +G +
Sbjct: 1030 QGKVTRQGKFKPNSVTYRTKAGN--ILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1084
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1085 FVRDSSQVHPLAVLLLT 1101
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 152/223 (68%), Gaps = 17/223 (7%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
+E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE + +G C ++
Sbjct: 429 QETHQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 488
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVSQG 299
TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 489 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN- 547
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P+ + VS H+IVDE+HERD +DF+L +++ + P LRL+LMSAT
Sbjct: 548 ----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATG 594
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
D +RF++YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 595 DNERFARYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQHRH 637
>gi|295829040|gb|ADG38189.1| AT2G30800-like protein [Capsella grandiflora]
gi|295829050|gb|ADG38194.1| AT2G30800-like protein [Neslia paniculata]
gi|345289957|gb|AEN81470.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289959|gb|AEN81471.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289961|gb|AEN81472.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289965|gb|AEN81474.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289967|gb|AEN81475.1| AT2G30800-like protein, partial [Capsella rubella]
Length = 173
Score = 263 bits (671), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/173 (75%), Positives = 152/173 (87%), Gaps = 1/173 (0%)
Query: 497 TALQLGEQENQPEVAQIIKKHMENALSDSMKQQ-LLDKYLATVNPELIDLVLIEQLLRKI 555
TAL+L E ENQ E AQII++H +N+ S+S + Q LLDKY+AT+NPE +D+ LI QL+RKI
Sbjct: 1 TALELAETENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATINPEQVDVSLILQLMRKI 60
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
C DSEDGAILVFLPGW+DINKTR RLL NPFF D++KF II LHSMVP+ +QKKVF RPP
Sbjct: 61 CGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPP 120
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
GCRKI+L+TNIAE+A+TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA
Sbjct: 121 RGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 173
>gi|402860250|ref|XP_003894546.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Papio anubis]
Length = 1291
Score = 263 bits (671), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 267/496 (53%), Gaps = 31/496 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 715 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 774
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 775 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 833
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 834 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 893
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 894 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 953
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 954 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 1008
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 1009 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 1067
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 1068 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1126
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1127 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1183
Query: 974 HVRNCTVVGPLPLLLL 989
VR+ + V PL +LLL
Sbjct: 1184 FVRDSSQVHPLAVLLL 1199
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 153/225 (68%), Gaps = 17/225 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
+ +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE + +G C +
Sbjct: 524 VWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNV 583
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVS 297
+ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 584 IITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQS 643
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P+ + VS H+IVDE+HERD +DF+L +++ + P LRL+LMSA
Sbjct: 644 N-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 689
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
T D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 690 TGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 734
>gi|443732004|gb|ELU16896.1| hypothetical protein CAPTEDRAFT_153404 [Capitella teleta]
Length = 1258
Score = 263 bits (671), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 276/529 (52%), Gaps = 55/529 (10%)
Query: 504 QENQPEVAQIIKKHMENALSDSMKQQLLDKY-----------LATVNPELIDLVLIEQLL 552
QEN+ EV K+ + +S + ++ L + + + +L++L LI LL
Sbjct: 682 QENETEVKVTGKQGQVHKVSATWSREDLSRIDHQYPLKVRNTVTRMREDLVNLELIASLL 741
Query: 553 RKICMDSED--GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
I D GA+LVFLPG I++ + LLA + D ++F +I LHS++ S Q
Sbjct: 742 AAIEEQYADVSGAVLVFLPGLSAIHELNEMLLAERRYADPARFRLIALHSVLSSDNQSAA 801
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
F PPPG RKI+L+TNIAET ITI DVV+VID GR KE Y + +S L+ +VSKASA
Sbjct: 802 FDVPPPGVRKIVLATNIAETGITIPDVVFVIDCGRAKEIRYAEGSQLSCLEEVFVSKASA 861
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK---LLDPNCNIE 727
QR GRAGR Q G C+ LY+Q R S+ + +PEI R+P+E LCL + L P
Sbjct: 862 SQRQGRAGRVQEGFCFRLYTQQRYDSMQRYTIPEILRVPLEGLCLHIMKAGLGTPAA--- 918
Query: 728 DFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
FL LDPP + + A+ LQ++GA+ ++T LG L L VH + KML +A ++
Sbjct: 919 -FLASALDPPSANRVTCAMATLQEVGAID-GVQLTPLGHHLAVLPVHVRLGKMLVYASVL 976
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
CL P +A A + PF PI +++ A AK A SD L + AF WK
Sbjct: 977 GCLRPMAVVAAAMADKSPFVAPI--DQRALAEEAKNRFAMF---SSDHLTLYNAFSAWKQ 1031
Query: 848 AKQRGQEA--WFCSQYFV----------SSGVMNMLL---GMRKQLQTELIKNG--FIPE 890
+++ G++A FC Q F+ ++G + LL G ++ +L+K+ +
Sbjct: 1032 SQRNGRQADQSFCQQNFLRRSSLIDIENTAGDLIRLLSSVGFKEISTLDLLKSKKPCVEG 1091
Query: 891 DVSSCSHNARVPGIIHAVLMAGLYPMVARL-RPPHKNGRR---FVETAGGAKVRLHPHSL 946
D + S+ ++ A L AGLYP VA++ R RR F TA G + +HP S+
Sbjct: 1092 DWGALSNTQ--AAVLKAALTAGLYPNVAKISRTDDNKARRQACFATTAQGQETAVHPASV 1149
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
N F T ++Y E + + +R+C++V PLLL + V
Sbjct: 1150 N---RFMATSG--WLLYQEKVKS-SRVFLRDCSLVSAFPLLLFGGSLTV 1192
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 162/285 (56%), Gaps = 21/285 (7%)
Query: 164 KVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQ 223
+++ L + ++ +++ R LP+ + K+ + ST+ + ++I+GETG GK+TQVPQ
Sbjct: 442 QLKRLLAECQRSDQYTRLMTTRQSLPVFALKEAVVSTLRKHPSLVIAGETGSGKSTQVPQ 501
Query: 224 FLLEHIWSKGETCKIVCTQPRRISATSVAERISVERG----ENIGDNIGYKIRLESKGGK 279
FLLE + +G I+ TQPRRISATS+A R+ E G GY+IR + K
Sbjct: 502 FLLEDLILQGGHGSILVTQPRRISATSLANRVCQEIGCPGPGQRNSLCGYQIRSDYKCSS 561
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
+ +VFCT G+LLR L+ G +LK ++H+I+DE+HER SDF+L +
Sbjct: 562 TARLVFCTTGILLRRLL--GDPKLK------------GISHVIIDEVHERSVDSDFLLVL 607
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSA- 398
+R +L P +RL+LMSAT+D++RFS Y GCPV++V G + V+ +L D+L K
Sbjct: 608 LRRLLVERPSMRLVLMSATVDSERFSSYLRGCPVLRVAGRAFDVQVTHLPDILVNTKYTL 667
Query: 399 --ESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDML 441
+S + + S ++ + E+ K +S WS ++ +
Sbjct: 668 DQDSKYAINPSQLIQENETEVKVTGKQGQVHKVSATWSREDLSRI 712
>gi|147866082|emb|CAN84132.1| hypothetical protein VITISV_000110 [Vitis vinifera]
Length = 480
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 220/377 (58%), Gaps = 13/377 (3%)
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
+KI+L+TNIAE++ITIDDVVYVID G+ KE SYD N ++ L SW+SKASA QR GRAG
Sbjct: 23 KKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAG 82
Query: 679 RCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
R + G+CY LY ++ ++ FQ+PEI R P++ELCL +K L I FL K L PP
Sbjct: 83 RVRPGVCYRLYPKMIHEAMLQFQLPEILRTPLQELCLNIKSLQLG-KIGSFLSKALQPPD 141
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
++++NA+ +L+ IGAL E++T LG L L + P + KML + CL+PALT+A
Sbjct: 142 PLSVQNAVELLKTIGALDDMEELTPLGRHLCKLPLDPNIGKMLLMGSIFQCLNPALTIAA 201
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFC 858
A +RDPF LPI N K+ A AAK A SD +A++ AFE WK+AK G+E FC
Sbjct: 202 ALAHRDPFVLPI--NRKEEANAAKRSFAG--DSCSDHIALLNAFEGWKDAKCSGKERDFC 257
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI--IHAVLMAGLYPM 916
+ F+S + M+ MR Q L GF+ + + ++N + + A+L AGLYP
Sbjct: 258 WENFLSPITLQMMDDMRNQFLDLLSDIGFVDKSKGAIAYNQYSNDLEMVCAILCAGLYPN 317
Query: 917 VARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVR 976
V + + K + + G KV +HP S+N + P MVY E + + VR
Sbjct: 318 VLQCKRRGKRTAFYTKEVG--KVDIHPASVNAGVHLFPL---PYMVYSEKVK-TASIFVR 371
Query: 977 NCTVVGPLPLLLLATEI 993
+ T + LLL +
Sbjct: 372 DSTNISDYSLLLFGGNL 388
>gi|75070502|sp|Q5R607.1|DHX30_PONAB RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|55732210|emb|CAH92809.1| hypothetical protein [Pongo abelii]
Length = 1194
Score = 262 bits (670), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 266/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ TI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 STTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 358 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>gi|334333642|ref|XP_001375513.2| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Monodelphis domestica]
Length = 1379
Score = 262 bits (670), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 267/496 (53%), Gaps = 33/496 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWE 572
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I + G IL FLPGW+
Sbjct: 805 VKEHYLEDILAKLGKHQHRHRHHESEDECALDLDLMTDLVLHIDARGDPGGILCFLPGWQ 864
Query: 573 DINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAI 632
+I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET+I
Sbjct: 865 EIKGVQQRL-QEALGSYESKYLILPVHSNIPMMDQKAIFQQPPTGVRKIVLATNIAETSI 923
Query: 633 TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQL 692
T++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+ +
Sbjct: 924 TVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 983
Query: 693 RAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDI 752
R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ+I
Sbjct: 984 RLEKMAPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPDIKAVDEAVILLQEI 1043
Query: 753 GALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLPIS 811
G L E +T LG++L +S P ++K + A + CL P L ++C + RDPF S
Sbjct: 1044 GVLDQREFLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF----S 1097
Query: 812 PNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSGVM 868
+ + RA K + + SD LA + A W+ + R + + + + +
Sbjct: 1098 SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSL 1157
Query: 869 NMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVARLR 921
+ G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + ++R
Sbjct: 1158 RFIHGLIKQF-SENIYEAFLVGKPSDCTLPSAQCNQYSEEEELVKGVLMAGLYPNLIQVR 1216
Query: 922 PP--------HKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
N + AG + LH ++N + + ++ + Y + +G +
Sbjct: 1217 QGKVTRQGKFKPNSVTYRTKAG--NILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1271
Query: 974 HVRNCTVVGPLPLLLL 989
VR+ + V PL +LLL
Sbjct: 1272 FVRDSSQVHPLAVLLL 1287
Score = 212 bits (540), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 152/223 (68%), Gaps = 17/223 (7%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
+E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE + +G C ++
Sbjct: 616 QETHQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 675
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVSQG 299
TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 676 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN- 734
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P+ + VS H+IVDE+HERD +DF+L +++ + P LRL+LMSAT
Sbjct: 735 ----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATG 781
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
D +RF++YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 782 DNERFARYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQHRH 824
>gi|449296743|gb|EMC92762.1| hypothetical protein BAUCODRAFT_261696 [Baudoinia compniacensis UAMH
10762]
Length = 1482
Score = 262 bits (670), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 261/485 (53%), Gaps = 43/485 (8%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF----FRDTSKFVIIP 597
L+ L+ ++ +IC ++DGAIL FLPG ++I KT+ LL + F F D KF I
Sbjct: 919 LVPTALLAAVIARICKTTKDGAILAFLPGIDEILKTQASLLESIFADLDFGDPLKFRICL 978
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHSMVP +Q +F +PPPGCRKIILSTNIAET+IT+ DV +V+D+G+++E YD +
Sbjct: 979 LHSMVPKDEQAAIFGQPPPGCRKIILSTNIAETSITVTDVKHVVDTGKLRELRYDQLRRI 1038
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
+ LQ W SK++AKQRAGRAGR Q G + L+S+ R SL +PE+ R+ ++E L +
Sbjct: 1039 TKLQCVWESKSNAKQRAGRAGRVQDGYYWALHSKERHNSLKAVGLPELLRVDLQETVLSI 1098
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K +E+ L++ ++PP + IR A LQ I AL+ DE++T LG L L VHP +
Sbjct: 1099 KAQRFKEPVEELLEQAIEPPPTQAIRAARDNLQAIEALTGDERLTMLGRLLSKLPVHPTL 1158
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
KM+ ++ CLDP L A++ R F PI+ + A + A + SD LA
Sbjct: 1159 GKMIVLGVIFRCLDPMLIFGAAANERSLFINPIAAEPRAAANRVRRAYAGEHS--SDHLA 1216
Query: 838 VIAAF-ECWKNAKQRGQEAWF--CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
++ AF E +Q GQ + + + + G + +Q+ L + G IP + S
Sbjct: 1217 ILRAFREIRAIQRQDGQPSAYRRAVERNIHIGAFKTIDQTARQILEVLGETGLIPRILGS 1276
Query: 895 -----------CSHNARVPGIIHAVLMAGLYPMV--------ARLRPPHKNGRRFVETAG 935
+ N+ P +I A+L+AGLYP + + R P+++G
Sbjct: 1277 HQRETVYGSAELNRNSDNPILIQALLLAGLYPNLGAKVSERGSSYRTPNEHG-------- 1328
Query: 936 GAKVRLHPHSLNFKLSF--KKTDDCPLMVYDEITRGDGG--MHVRNCTVVGPLPLLLLAT 991
V +HP SLN + KK L + +++ + G + +R+ T+V PL +L
Sbjct: 1329 ---VLMHPASLNDDIGRKEKKHRSGTLFAFSSLSQSNDGKCIFMRDSTMVSPLTAVLFGG 1385
Query: 992 EIAVA 996
+ ++
Sbjct: 1386 RLQMS 1390
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 160/275 (58%), Gaps = 44/275 (16%)
Query: 135 NQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFK 194
N RK + K+VD K + K + EK+++L+ + ++ LP++ ++
Sbjct: 601 NYPRKRRQLDRKQVDFLSKHLVKKQQA----------FEKNSSLQNLHAAKAALPMNQYR 650
Query: 195 DVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVA 252
+ V ++ +I G TG GKTTQVPQ LLEH + G+ +C IVCTQPRRI+ATSVA
Sbjct: 651 QDVIGMVSNHPHSIIVGATGSGKTTQVPQILLEHEIASGQGGSCNIVCTQPRRIAATSVA 710
Query: 253 ERISVERGENIGDNIGYKIRLESK----GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
+R++VER E++G ++GY +R + + GG SI++CT G+LL L +
Sbjct: 711 QRVAVERNEDLGQSVGYHVRFDQRLPESGG---SIIYCTTGILLEQL-----------KH 756
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML-------PSYPHLRLILMSATLDA 361
P + A++H++VDE+HERD DF++ II+ L S P +++LMSATLD
Sbjct: 757 DP-DGTLDAISHLVVDEVHERDINIDFLMIIIKKALAARLAAGKSTP--KVVLMSATLDT 813
Query: 362 DRFSQYFGG----CPVIQVPGFTYPVKSFYLEDVL 392
+ F+ YF CP + VPG TYPV+ YLEDV+
Sbjct: 814 ELFANYFSTEGKPCPSLTVPGRTYPVQEQYLEDVM 848
>gi|119569365|gb|EAW48980.1| YTH domain containing 2, isoform CRA_c [Homo sapiens]
Length = 709
Score = 262 bits (670), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 248/470 (52%), Gaps = 51/470 (10%)
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L+ W+SKASA QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KL
Sbjct: 2 LKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKL 61
Query: 720 LDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
L P NC I DFL K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P +
Sbjct: 62 LAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLG 121
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
KM+ A+++ CLDP LT+AC YRDPF LP ++K+ A + + G SD +A+
Sbjct: 122 KMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMAL 179
Query: 839 IAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSS 894
+ AF+ W+ A+ G E FC + F+S M +++GMR QL +L +GF+ D+
Sbjct: 180 LRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRD 239
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFK 953
+ N+ ++ A L+AG+YP + H + V T KVR HP S+ + +K
Sbjct: 240 VNTNSENWAVVKAALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYK 294
Query: 954 K---------------TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPA 998
K TD ++YDE+TR ++R C+ V P+ +L+ +A
Sbjct: 295 KIPPANGQAAAIKALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASN 351
Query: 999 PDNEDDD-EDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYF 1057
E D + +D +D E++DKT+ + +D WL+F
Sbjct: 352 ALQEPSSFRVDGIPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLHF 392
Query: 1058 GSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
+ + LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 393 TLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 442
>gi|296474858|tpg|DAA16973.1| TPA: putative ATP-dependent RNA helicase DHX30 [Bos taurus]
Length = 1220
Score = 262 bits (670), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 251/464 (54%), Gaps = 28/464 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 734
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 735 PMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 794
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 795 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMP 854
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 855 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 914
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 915 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 968
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 969 VSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1027
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1028 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1087
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1088 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1128
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 153/225 (68%), Gaps = 17/225 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
+ +E +LP+ +D I + ++ + VV+I+G+TGCGKTT++PQ LLE + +G C +
Sbjct: 453 VWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNV 512
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVS 297
+ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 513 IITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQS 572
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P+ + VS H++VDE+HERD +DF+L +++ + P LRL+LMSA
Sbjct: 573 N-----------PSLEGVS---HVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 618
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
T D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 619 TGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 663
>gi|115495851|ref|NP_001070003.1| putative ATP-dependent RNA helicase DHX30 [Bos taurus]
gi|110278939|sp|Q2NKY8.1|DHX30_BOVIN RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|84708859|gb|AAI11350.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Bos taurus]
Length = 1220
Score = 262 bits (669), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 251/464 (54%), Gaps = 28/464 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 734
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 735 PMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 794
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 795 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMP 854
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 855 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 914
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 915 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 968
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 969 VSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1027
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1028 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1087
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1088 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1128
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 151/225 (67%), Gaps = 17/225 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
+ +E +LP+ +D I + ++ + VV+I+G+TGCGKTT++PQ LLE + +G C +
Sbjct: 453 VWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNV 512
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVS 297
+ TQPRRISA SVA+R+S E G + N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 513 IITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQS 572
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P+ + VS H++VDE HERD +DF+L +++ + P LRL+LMSA
Sbjct: 573 N-----------PSLEGVS---HVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSA 618
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
T D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 619 TGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 663
>gi|395856357|ref|XP_003800595.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Otolemur garnettii]
Length = 1155
Score = 262 bits (669), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 611 LDLDLVTDLVLHIDAHGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 669
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 670 PMMDQKAIFQQPPIGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 729
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 730 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMP 789
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 790 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 849
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 850 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 903
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 904 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 962
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 963 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1022
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1023 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1064
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP M +E A ++ S
Sbjct: 319 IETFLNHYPVDSSWTSPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEELRLSQS 377
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 378 LLELWRRRGPVWQEVPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 437
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 438 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 497
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 498 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 543
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 544 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 598
>gi|194878727|ref|XP_001974117.1| GG21550 [Drosophila erecta]
gi|190657304|gb|EDV54517.1| GG21550 [Drosophila erecta]
Length = 939
Score = 262 bits (669), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 278/518 (53%), Gaps = 37/518 (7%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQ 550
KA+D R QL E+ Q E +I+ ++ + +S ++LDK + D+ I
Sbjct: 352 KARDRRPKRQLPERRMQHEA--MIEPYLRR-IRNSYDSRVLDKLRLPESEGCEDIDFIAD 408
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP------FFRDTSKFVIIPLHSMVPS 604
L+ IC + +GAILVFLPG++ I++ + +L P +RD + PLHS++ S
Sbjct: 409 LVYYICENEPEGAILVFLPGYDKISQLYN-ILDKPKTPKGQRWRD--HMAVFPLHSLMQS 465
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+Q+ VFKRPP G RK+I+ST IAET++TIDDVVYVI+SGR K SYD N+ +L W
Sbjct: 466 GEQQAVFKRPPAGKRKVIISTIIAETSVTIDDVVYVINSGRTKATSYDIETNIQSLDEVW 525
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
V+KA+ +QR GRAGR + GICY+L+S+ R + D PEI R +E + L +KLL
Sbjct: 526 VTKANTQQRKGRAGRVRPGICYNLFSRAREDRMADIPTPEILRSKLESIILSLKLL---- 581
Query: 725 NIED---FLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
+I+D FLQ ++ P I+ + +L+ I AL +T LG L L + P M KM+
Sbjct: 582 HIDDPYRFLQTLINAPNPEAIKIGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMI 641
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
+ L CLDP + A A ++ PF P+ ++ R K +A +SD L V
Sbjct: 642 LMSALFCCLDPITSAAAALSFKSPFYSPLG--KESRVDEIKRRMAR--NMRSDHLLVHNT 697
Query: 842 FECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP----EDVSSCSH 897
+ ++ ++ E FC + F+SS + L M+ Q L F+ +D +S +
Sbjct: 698 IDAYRESRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLTSSNCKDAASNKN 757
Query: 898 NARVPGIIHAVLMAGLYPMVARLRPPH--KNGRRFVETAG---GAKVRLHPHSLNFKLSF 952
+ ++P ++ A++ AGLYP +A LR KN R + T G +V HP S+N S
Sbjct: 758 SEKIP-LLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVN---SG 813
Query: 953 KKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+ D VY + + + + + T+V P+ L++
Sbjct: 814 ESGFDSAYFVYFQRQKS-TDLFLLDSTMVFPMALIIFG 850
Score = 196 bits (498), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 161/256 (62%), Gaps = 23/256 (8%)
Query: 142 KTRGKRVDIFC-KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITST 200
+T+ + D+ C PK+ + +++E ++E+ A R+ + R KLP + D I
Sbjct: 108 ETKERNADLNCVNPKLDER---LQLELEQRQLEEKA--RKRLAARQKLPTMKYADEIVQA 162
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVE 258
V NQV+LI G TGCGKTTQVPQ LL+ S+G +C++VCTQPRRISA ++AE +S E
Sbjct: 163 VRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRVVCTQPRRISAIAIAEWVSHE 222
Query: 259 RGENIGDNIGYKIRLES-KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA 317
R E++G+++GY+IRLES K + +SI +CT GVLL+ L S P ++S
Sbjct: 223 RCESLGNSVGYQIRLESRKPRERASITYCTTGVLLQQLQSD-----------PLMHNLSV 271
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVP 377
L I+DEIHER +D ++ +++ +LP P L++ILMSAT+ F YF CP+ ++
Sbjct: 272 L---ILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIE 328
Query: 378 GFTYPVKSFYLEDVLS 393
G +PV+ YLEDVLS
Sbjct: 329 GVMFPVQMLYLEDVLS 344
>gi|74221870|dbj|BAE28661.1| unnamed protein product [Mus musculus]
Length = 546
Score = 262 bits (669), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 251/464 (54%), Gaps = 28/464 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 2 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 60
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 61 PMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 120
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 121 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 180
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 181 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 240
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 241 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 294
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 295 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 353
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 354 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 413
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 414 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 454
>gi|195148556|ref|XP_002015239.1| GL19591 [Drosophila persimilis]
gi|194107192|gb|EDW29235.1| GL19591 [Drosophila persimilis]
Length = 946
Score = 262 bits (669), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 256/461 (55%), Gaps = 28/461 (6%)
Query: 544 DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FF---RDTSKFVIIPL 598
D+ I L+ IC + +GAILVFLPG++ I+K ++ L NP F R V+ PL
Sbjct: 411 DIDFIADLVYYICENEPEGAILVFLPGFDKISKL-NKALENPQGSFKGQRWRQSLVLYPL 469
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS++PSV+Q+ VF+RPP G RK+I+ST IAET++TIDDVVYVI+SGR K +YD +N+
Sbjct: 470 HSLMPSVEQQAVFRRPPAGKRKVIMSTVIAETSVTIDDVVYVINSGRTKASNYDIASNIQ 529
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
+L WVSKA+ +QR GRAGR + GICY+L+S+ R + D P+I R +E + L +K
Sbjct: 530 SLDEVWVSKANTQQRKGRAGRVRPGICYNLFSRAREDQMADIPTPDILRSKLESIILSLK 589
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
LL + N +FL + P I+N +++L IGAL + +T LG L L V P M
Sbjct: 590 LLHID-NPYEFLGTLISAPEQEAIKNGVLLLMRIGALDKEGILTPLGVHLAKLPVDPQMG 648
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
KM+ + L CLDP + A A Y+ PF P+ + R K ++A + +SD L V
Sbjct: 649 KMMLMSALFCCLDPITSAAAALSYKSPFYTPLGL--ESRVDQVKRQMA--HNMRSDHLMV 704
Query: 839 IAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSS 894
++ K RG FC ++S + L M+ Q L F+ D SS
Sbjct: 705 HNTICSYR--KSRGDRN-FCYTNYLSYMTLQQLERMKNQFAELLCNYKFLSSPSLLDKSS 761
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGRRFVE---TAGGAKVRLHPHSLNFK 949
++ ++P ++ A++ AGLYP +A +R +N R V T G +V HP S+N
Sbjct: 762 NINSDKIP-LLRAIIGAGLYPNMAYMRKTRRIRNSVRAVHNMSTDDGKRVNFHPSSVN-- 818
Query: 950 LSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
S + + D VY + + +++ + T+V P+ L++
Sbjct: 819 -SGESSFDSDYFVYYQRQKS-SSLYLLDSTMVFPMALIIFG 857
Score = 202 bits (515), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 145/221 (65%), Gaps = 17/221 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--E 234
N+R+ + R +LP + I V NQV+LI G TGCGKTTQVPQ LL+H KG
Sbjct: 146 NMRERLHARQQLPAMKHAEEIIRAVQQNQVILIVGSTGCGKTTQVPQLLLDHSIVKGCAS 205
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLR 293
C+I+CTQPRRISA ++AER+S ERGEN+G ++GY+IRLES+ + +SI +CT GVLL+
Sbjct: 206 DCRIICTQPRRISAITIAERVSYERGENLGLSVGYQIRLESRRPRDRASITYCTTGVLLQ 265
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
L S + + +L+ +I+DEIHER +D ++ +++ +LP P+L++I
Sbjct: 266 QLQSDPL--------------MHSLSVLILDEIHERSVETDLLMGLLKVILPHRPNLKVI 311
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
LMSAT+ F YF CP+ ++ G +PV+ YLEDVLS+
Sbjct: 312 LMSATVREQDFCDYFENCPMFRIEGVMFPVRMLYLEDVLSL 352
>gi|335299024|ref|XP_003358469.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like isoform 2
[Sus scrofa]
Length = 1155
Score = 262 bits (669), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 611 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 669
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 670 PMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 729
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 730 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 789
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 790 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 849
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 850 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 903
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 904 VSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 962
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 963 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1022
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1023 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1064
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 179/297 (60%), Gaps = 25/297 (8%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKP--KMSKAEIAMKVESL 168
++ HYP D+ P +L + K G D I KP +S+AE ++L
Sbjct: 319 IETFLNHYPVDNSWISPELRLQGDDILPLGKDSGPLSDPITGKPYVPLSEAEELRLSQNL 378
Query: 169 TSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH 228
+ + Q E +LP+ +D I + ++ + VV+I+G+TGCGKTT++PQ LLE
Sbjct: 379 LELWRRRGPVWQ---EAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER 435
Query: 229 IWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVF 285
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++F
Sbjct: 436 YVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLF 495
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 496 CTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQR 541
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 542 LNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 598
>gi|357620059|gb|EHJ72384.1| putative DEAH box polypeptide 36 [Danaus plexippus]
Length = 1021
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/414 (39%), Positives = 236/414 (57%), Gaps = 16/414 (3%)
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
E + L+ LL IC E GAILVFLPG DI K R++ + +K+ I PLHS
Sbjct: 461 EELSFELLVDLLIYIC-KGEPGAILVFLPGIGDITKLM-RMMESTNLFPANKYEIYPLHS 518
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+P+++Q K+F+RPP RKII++TNIAET+ITIDDVVYV+DS R+K K + N+STL
Sbjct: 519 RLPTLEQHKIFERPPDNIRKIIIATNIAETSITIDDVVYVVDSARIKMKGLNVEMNLSTL 578
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
Q+ WVS+A+ +QR GRAGRCQ GICYHL + RA L + +PE++R + E L +K L
Sbjct: 579 QTEWVSQANLRQRRGRAGRCQPGICYHLLTSFRAEKLEERTLPELQRSDLLEPVLMIKRL 638
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
ED L+ PP TI++A+ LQ GAL+ E +T LG L L VHP K+
Sbjct: 639 RLGL-AEDALKMVPSPPADSTIQSAVKHLQRCGALNTVETLTPLGWHLARLPVHPAAGKL 697
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
L L CLD A +LA +++PF + I ++ AK E A G SD +A
Sbjct: 698 LVLGALAGCLDRAASLAAVWGFKEPFQMVIG--KEYEVDMAKREFA--MGEPSDHIAASE 753
Query: 841 AFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE-DVSSC--SH 897
A W+N +R + + F + F+S+ + +L+GM+ Q L + GF+ +V S +
Sbjct: 754 AIIQWENCPRRERSS-FAYRNFLSNNTLELLVGMKNQFGDNLRQMGFLRSGNVRSKWENR 812
Query: 898 NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE-----TAGGAKVRLHPHSL 946
NA + A++ A LYP +A +R + N R + T ++ +HP S+
Sbjct: 813 NADNLSLFKAIVAASLYPNIATVRWTNLNNFRKQQRISAYTPEDGRLVIHPSSV 866
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 142/220 (64%), Gaps = 19/220 (8%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+ +++ R KLP + +++ NQV++ISGETGCGK+TQVPQ +L+H KG
Sbjct: 193 KNMLKFRKKLPAYIKAKELIKSINDNQVIVISGETGCGKSTQVPQIILDHAICSKKGAHT 252
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLL-RL 294
KI+ TQPRRI+A+S+A R++ ER E +G+++GY +RLE + SI +CT G+LL L
Sbjct: 253 KILVTQPRRIAASSLAIRVAKERAEKLGNSVGYAVRLEKVDERSRGSIQYCTTGILLAEL 312
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
V+QG++ +H+I+DE+HERD + D + ++R +L +L+LIL
Sbjct: 313 EVNQGLTNY---------------SHVILDEVHERDVHVDLSMCMLRKVLRKRKNLKLIL 357
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
MSATLDA+ S YF CP++ + G YPV+ YLED+L++
Sbjct: 358 MSATLDAESLSAYFDNCPLMHIEGLAYPVQDVYLEDILNL 397
>gi|395856355|ref|XP_003800594.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Otolemur garnettii]
Length = 1194
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDAHGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPIGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP M +E A ++ S
Sbjct: 358 IETFLNHYPVDSSWTSPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEELRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEVPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|295829046|gb|ADG38192.1| AT2G30800-like protein [Capsella grandiflora]
gi|295829048|gb|ADG38193.1| AT2G30800-like protein [Capsella grandiflora]
Length = 173
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/173 (75%), Positives = 151/173 (87%), Gaps = 1/173 (0%)
Query: 497 TALQLGEQENQPEVAQIIKKHMENALSDSMKQQ-LLDKYLATVNPELIDLVLIEQLLRKI 555
TAL+L E ENQ E AQII++H +N+ S+S + Q LLDKY AT+NPE +D+ LI QL+RKI
Sbjct: 1 TALELAETENQLEAAQIIREHADNSQSNSQQGQQLLDKYXATINPEQVDVSLILQLMRKI 60
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
C DSEDGAILVFLPGW+DINKTR RLL NPFF D++KF II LHSMVP+ +QKKVF RPP
Sbjct: 61 CGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPP 120
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
GCRKI+L+TNIAE+A+TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA
Sbjct: 121 RGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 173
>gi|345289955|gb|AEN81469.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289963|gb|AEN81473.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289969|gb|AEN81476.1| AT2G30800-like protein, partial [Capsella rubella]
Length = 173
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/173 (75%), Positives = 151/173 (87%), Gaps = 1/173 (0%)
Query: 497 TALQLGEQENQPEVAQIIKKHMENALSDSMKQQ-LLDKYLATVNPELIDLVLIEQLLRKI 555
TAL+L E ENQ E AQII++H +N+ S+S + Q LLDKY+AT+NPE +D+ LI QL+RKI
Sbjct: 1 TALELAETENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATINPEQVDVSLILQLMRKI 60
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
C DSEDGAILVFLPGW+DINKTR RLL NPFF D+ KF II LHSMVP+ +QKKVF RPP
Sbjct: 61 CGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSVKFDIICLHSMVPAGEQKKVFNRPP 120
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
GCRKI+L+TNIAE+A+TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA
Sbjct: 121 RGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 173
>gi|410951025|ref|XP_003982202.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2 [Felis
catus]
Length = 1155
Score = 261 bits (668), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 611 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 669
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 670 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 729
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 730 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 789
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 790 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 849
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 850 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 903
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 904 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 962
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 963 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1022
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1023 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1064
Score = 213 bits (541), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP + +E A +V +
Sbjct: 319 IETFLNHYPVDSSWITPELRLQSDDVLPLGKDSGPLSDPITGKPYVPLSE-AEEVRLSQN 377
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 378 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 437
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 438 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 497
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 498 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 543
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 544 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 598
>gi|348528133|ref|XP_003451573.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Oreochromis
niloticus]
Length = 1375
Score = 261 bits (668), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 261/484 (53%), Gaps = 39/484 (8%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L +NP I++ L+ L+ + + DGAILVFLPG I + D L ++ FRD
Sbjct: 842 LQYMNPNKINMDLLVDLIDYLDKAPQFVDVDGAILVFLPGLAHIQQLFDLLSSDKRFRDK 901
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ I+ LHS + S Q F PP G RKI+LSTNIAET +TI DVV+VID+G+ KE
Sbjct: 902 TRYRIVALHSTLSSKDQAAAFTVPPSGVRKIVLSTNIAETGVTIPDVVFVIDTGKTKENK 961
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
Y + +S+L +++SKASA QR GRAGR + G C+ LY + R D+ +PEI R+P+
Sbjct: 962 YHESSQMSSLVETFISKASALQRQGRAGRVRNGFCFRLYPKYRFDVFMDYSIPEILRVPL 1021
Query: 711 EELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV-TELGE 766
EELCL + C EDFL + LD P ++ NA+ +L+ IGA D+ + T LG
Sbjct: 1022 EELCLHIM----KCQYGSPEDFLSRALDAPQPQSVSNAVNLLRKIGACHPDDHILTPLGH 1077
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L V+ + KML + ++ CL+P T+A A + PF P+ N K+ A AK A
Sbjct: 1078 HLASLPVNVKIGKMLIYGAILGCLEPIATIAAAITEKSPFFTPM--NRKEEANLAK---A 1132
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
+L SD L + A+ WKN++ G E +C ++F++ + + ++ +L + +
Sbjct: 1133 ALAIANSDHLTIYNAYLGWKNSQTDGLRGEMSYCRKHFLNRTALITIEDVKHELMKMMEQ 1192
Query: 885 NGFIPEDV--------SSCSHNARVPGIIHAVLMAGLYPMVARL--RPPHKNGRRF---V 931
GF + S + + +++AVL AGLY VAR+ P R V
Sbjct: 1193 VGFWSSRSSSSSSLKPQAASVSKQQISVLNAVLTAGLYDNVARVLCTPSVDVLERVACTV 1252
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
ET G K ++H S+N L ++Y E + +++R+ T++ P P+LL
Sbjct: 1253 ETPQG-KAQVHFSSVNRNLQTHG-----WLLYQEKVKY-TKIYLRDTTLISPFPMLLFGG 1305
Query: 992 EIAV 995
+I V
Sbjct: 1306 DIDV 1309
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 165/272 (60%), Gaps = 33/272 (12%)
Query: 129 GEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKL 188
GE+ + Q KS+K RG R +I A++ E L +++K R++ ER +L
Sbjct: 529 GERRE-EQEDKSEK-RGGRREI--------ADLEAAREHLL-KLKKSPLARKLQAEREQL 577
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG---ETCKIVCTQPRR 245
P+ + + + + VV+++GETG GK+TQ+PQFLLE + + G + C IV TQPRR
Sbjct: 578 PVFQHRHRVLEALQRHPVVVVAGETGSGKSTQIPQFLLEDLLTGGTAAQPCNIVVTQPRR 637
Query: 246 ISATSVAERISVERGENIGDN-----IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
ISA S+A R+S E G G GY+IR+E++ G + +++CT GVLLR L
Sbjct: 638 ISAMSLACRVSQELGCEDGPGSKSSLCGYQIRMENQSGDWTRLLYCTTGVLLRKLQHD-- 695
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
+++LTHIIVDE+HER SDF+L I++D++ L+LILMSAT+D
Sbjct: 696 ------------RHLNSLTHIIVDEVHERSVQSDFLLTILKDVVMKRSDLQLILMSATVD 743
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
D+FS YF CPVI +PG T+PV+ F+LED++
Sbjct: 744 CDKFSNYFNRCPVISIPGRTFPVEVFHLEDIV 775
>gi|158255968|dbj|BAF83955.1| unnamed protein product [Homo sapiens]
Length = 1155
Score = 261 bits (668), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 266/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 579 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 638
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 639 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 697
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR RAGRCQ+G YHL+
Sbjct: 698 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRDRAGRCQSGFAYHLFP 757
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 758 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 817
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 818 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 872
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 873 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 931
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 932 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 990
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 991 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1047
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1048 FVRDSSQVHPLAVLLLT 1064
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 177/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 319 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 377
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 378 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 437
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 438 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 497
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+ VDE+HERD +DF+L +++ +
Sbjct: 498 VGILLRKLQSN-----------PSLEGVS---HVTVDEVHERDVNTDFLLILLKGLQRLN 543
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 544 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 598
>gi|355683834|gb|AER97207.1| DEAH box polypeptide 30 [Mustela putorius furo]
Length = 1152
Score = 261 bits (668), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 609 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 667
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 668 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 727
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 728 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 787
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 788 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 847
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 848 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 901
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 902 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 960
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 961 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1020
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1021 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1062
Score = 212 bits (540), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L + K G D I KP + +E A +V +
Sbjct: 317 IETFLNHYPVDSSWISPELRLQSEDVLPLGKDSGPLSDPITGKPYVPLSE-AEEVRLSQN 375
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 376 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 435
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 436 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 495
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 496 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 541
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 542 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 596
>gi|73985696|ref|XP_863765.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 5 [Canis
lupus familiaris]
Length = 1155
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 611 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 669
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 670 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 729
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 730 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 789
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 790 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 849
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 850 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 903
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 904 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 962
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 963 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1022
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1023 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1064
Score = 213 bits (543), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP + +E A +V +
Sbjct: 319 IETFLNHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYVPLSE-AEEVRLSQN 377
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 378 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 437
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
S +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 438 SEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 497
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 498 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 543
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 544 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 598
>gi|55727636|emb|CAH90573.1| hypothetical protein [Pongo abelii]
Length = 1166
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 266/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +D L+ L+ I E G IL FLPG
Sbjct: 590 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDSDLVTDLVLHIDARGEPGGILCFLPG 649
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 650 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 708
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 709 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 768
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 769 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 828
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 829 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 883
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 884 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 942
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 943 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1001
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1002 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1058
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1059 FVRDSSQVHPLAVLLLT 1075
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 177/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 330 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 388
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 389 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 448
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G++ RLESK + +++FCT
Sbjct: 449 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQARLESKPPARGGALLFCT 508
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 509 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 554
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 555 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 609
>gi|149728695|ref|XP_001499666.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2 [Equus
caballus]
Length = 1155
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 611 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 669
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 670 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 729
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 730 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 789
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 790 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 849
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 850 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 903
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 904 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 962
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 963 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1022
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1023 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1064
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 319 IETFLNHYPVDTSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 377
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 378 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 437
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 438 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 497
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 498 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 543
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 544 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 598
>gi|354484235|ref|XP_003504295.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Cricetulus
griseus]
Length = 1222
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 251/464 (54%), Gaps = 28/464 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 736
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 737 PMMDQKAIFQQPPLGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 796
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 797 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 856
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 857 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 916
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 917 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 970
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 971 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 1029
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1030 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1089
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1090 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1130
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L + K G D I KP M +E A +V S
Sbjct: 386 IEAFLSHYPVDSSWISPELRLQNDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 444
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 445 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 504
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 505 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 564
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 565 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 610
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 611 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 665
>gi|311268826|ref|XP_003132222.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like isoform 1
[Sus scrofa]
Length = 1194
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 179/297 (60%), Gaps = 25/297 (8%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKP--KMSKAEIAMKVESL 168
++ HYP D+ P +L + K G D I KP +S+AE ++L
Sbjct: 358 IETFLNHYPVDNSWISPELRLQGDDILPLGKDSGPLSDPITGKPYVPLSEAEELRLSQNL 417
Query: 169 TSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH 228
+ + Q E +LP+ +D I + ++ + VV+I+G+TGCGKTT++PQ LLE
Sbjct: 418 LELWRRRGPVWQ---EAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER 474
Query: 229 IWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVF 285
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++F
Sbjct: 475 YVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLF 534
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 535 CTVGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQR 580
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 581 LNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|344275866|ref|XP_003409732.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like [Loxodonta
africana]
Length = 1194
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDAHGEPGGILCFLPGWQEIKGVQQRL-QEALGVHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPLGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPDIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 358 IETFLNHYPTDSSWISPEPQLQSDDILSLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIELHPVVVISGDTGCGKTTRIPQLLLERFV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+ E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGAHCNVIITQPRRISAVSVAQRVGHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPV+ YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVREHYLEDILAKLGKHQYPH 637
>gi|206725470|ref|NP_001125306.1| putative ATP-dependent RNA helicase DHX30 [Pongo abelii]
Length = 1194
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 266/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +D L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDSDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 177/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 358 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G++ RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQARLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>gi|170031307|ref|XP_001843527.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
gi|167869787|gb|EDS33170.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
Length = 1286
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 266/506 (52%), Gaps = 60/506 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDS------EDGAILVFLPGWEDINKTRDRLLANPF 586
K L ++P I+ LIE +L I S ++G IL+FLPG +I + L +
Sbjct: 716 KTLYLMDPLRINPELIEHVLSFIVDGSAGHGWPQEGTILIFLPGLAEIQTIHEALSDSRQ 775
Query: 587 F--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSG 644
F R K+V++PLHS + + +Q VFK+ P G RKI+LSTNIAET++TIDD V+V+D G
Sbjct: 776 FGPRGEGKYVLVPLHSTLTNEEQALVFKKAPKGKRKIVLSTNIAETSVTIDDCVFVLDCG 835
Query: 645 RMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VP 703
+MKEK +D N+ +L+ WVS+A+A QR GRAGR AG+C HLY++ R + Q VP
Sbjct: 836 QMKEKRFDSNRNMESLEVVWVSRANALQRKGRAGRVMAGVCIHLYTRPRFTNHILGQPVP 895
Query: 704 EIKRIPIEELCLQVKLLDP--NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
EI RIP+E L L++K L+ + ++++ L T++PP I A L D+GA L E++
Sbjct: 896 EIHRIPLEPLLLRIKTLETLKDKSLKEVLMATIEPPSVENIDAAKKRLVDVGAFDLHEQL 955
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T LG L L V + K++ F + CLD LT+A Y+ PF P S ++ A
Sbjct: 956 TPLGHHLATLPVDVRIGKLMLFGAIFQCLDSVLTIAACLSYKSPFVAPFSKRDEADARKR 1015
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFC--SQYFVSSGVMNMLLGMRKQLQ 879
+F +A+ SD L ++ A+ +K +R + A C + F+S+ ++ + M+ Q
Sbjct: 1016 QFAIAN-----SDHLTMLNAYRKYKETTKRSRYAAQCYAEENFLSTRTLHTIGEMKYQFL 1070
Query: 880 TELIKNGFIPEDVSS-----------------CSHNARVPGIIHAVLMAGLYPMVARLRP 922
L+ GF+P D+++ + N ++ A+L A LYP V ++
Sbjct: 1071 ELLVSIGFVPVDLTNRRGKFVKDDLAELTGTDINANGDNNRLLSAILCAALYPNVIKVLT 1130
Query: 923 PHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYD 964
P K+ FV A GA V LHP S+N + P +VY
Sbjct: 1131 PEKS---FVGGASGAVPKLPAPSDLRFKTQQDGYVNLHPSSINSSCGHFPS---PYLVYQ 1184
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLA 990
E + + +R T+V LPL+L +
Sbjct: 1185 EKVK-TSRIFIRETTMVPQLPLVLFS 1209
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 149/231 (64%), Gaps = 26/231 (11%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW-- 230
+ +A ++++ R +LP S I ++ + +++ISGETGCGK+TQVPQF+L++ W
Sbjct: 433 QNNATYKEMLRGRKQLPAWSKMSEIIHALEMHSILVISGETGCGKSTQVPQFILDN-WLL 491
Query: 231 -------SKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS 281
G +I+CTQPRRISA VAER++ ER E IG+ +GY+IRLE+K +
Sbjct: 492 QSSQLDNGNGSVPHVEIICTQPRRISAIGVAERVAEERAERIGNTVGYQIRLENKISAAT 551
Query: 282 SIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR 341
+ FCT G+LLR L S+ ++ +THIIVDE+HER SDF+L I++
Sbjct: 552 RLTFCTTGILLRRLQSEPT--------------LANVTHIIVDEVHERSEESDFLLLILK 597
Query: 342 DMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L P L++ILMSATL+++ FS YFG PV+++PG T+PV+ +LED+L
Sbjct: 598 QLLEKRPDLKVILMSATLNSNLFSSYFGDIPVLEIPGRTFPVEQLFLEDIL 648
>gi|392597272|gb|EIW86594.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1462
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 231/430 (53%), Gaps = 36/430 (8%)
Query: 547 LIEQLLRKICMD-----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
LI +LL ++C + S A L+F+PG +I K D L +P F + S F I PLHS
Sbjct: 928 LIVRLLERLCFEDPAYRSFSPATLIFMPGLGEIRKMNDILQEHPHFGNESSFRIYPLHSA 987
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+ + Q VF PPPG RKI+++TNIAET ITI D+ VIDSG+ +E +D +S L
Sbjct: 988 LSTENQTSVFDIPPPGVRKIVIATNIAETGITIPDITCVIDSGKQREMRFDEKRQISRLI 1047
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLL 720
++V+K++A QR GRAGR Q G+C+HL++++R + L D +PE+ R+ + +L L++K++
Sbjct: 1048 ETFVAKSNAAQRRGRAGRVQNGLCFHLFTRIRHDTMLADHPLPEMMRLSLSDLALRIKIM 1107
Query: 721 DPN--CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
+IED L + +DPP S+ I+ A+ L ++ AL+L E++T LG L L +
Sbjct: 1108 KVKIGTSIEDVLSRAMDPPSSINIQRAVSALVEVRALTLSEEITPLGRLLSKLPTDVHLG 1167
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K L ++++ CLDPALT+A A + PF P ++ F + G SD L +
Sbjct: 1168 KFLLTSVVLRCLDPALTIAAALSSKSPFVTPFGLEQEADRAKMTFRV-----GDSDFLTI 1222
Query: 839 IAAFECWKNAK-QRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED------ 891
AF W+ A G FC ++++S + + +R+Q LI + F+ D
Sbjct: 1223 HNAFASWRRATGNHGYARTFCRKHYLSQQNLQQIEELRQQFLGYLIDSSFLQVDKAFVKE 1282
Query: 892 -----VSSC--------SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAK 938
+ C N+ P +HA L AGLYP + L P ++ R +
Sbjct: 1283 LTRARSTRCLVTIPPVLDENSLDPAFVHAALTAGLYPKLLALDPTNQQMRTI---SNNQM 1339
Query: 939 VRLHPHSLNF 948
V HP S+NF
Sbjct: 1340 VSAHPSSINF 1349
Score = 203 bits (517), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 172/277 (62%), Gaps = 18/277 (6%)
Query: 131 KLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTS--RIEKDANLRQ-IVEERSK 187
K D Q K+ + +R + K S+ M E L R+ +++ Q ++ R+
Sbjct: 590 KWDLAQQNKTKGSESERQNQGSNIKKSRPAKEMHSEDLVQELRVRQESQAYQEMLRYRNG 649
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPI+ ++ I +T++ +Q++++SGETGCGK+TQVP F++E S+G+ C+I CT+PRRIS
Sbjct: 650 LPIAKYRQEIINTLEQSQILVLSGETGCGKSTQVPSFIMEDQLSRGQPCRIYCTEPRRIS 709
Query: 248 ATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVS 301
A S+A+R+S E GE G +GY IRLES K++ + + TNG+ LR+L S S
Sbjct: 710 AISLAQRVSAELGEAPGSVGTLNSLVGYSIRLESNTTKNTRLAYVTNGIALRMLESGSGS 769
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR--LILMSATL 359
+ A D++ THII+DE+HER SDF+L +++ ++ P LR +ILMSAT+
Sbjct: 770 ----SGQGSAFDEI---THIIIDEVHERSIESDFLLIVLKSLISQRPDLRHVIILMSATV 822
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
DA++ S +FGGCP + VPG T+PV +LED + + K
Sbjct: 823 DAEKISSFFGGCPTLHVPGRTFPVDVRFLEDSIELTK 859
>gi|242023719|ref|XP_002432278.1| ATP-dependent RNA helicase, putative [Pediculus humanus corporis]
gi|212517701|gb|EEB19540.1| ATP-dependent RNA helicase, putative [Pediculus humanus corporis]
Length = 918
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 260/470 (55%), Gaps = 27/470 (5%)
Query: 539 NPEL--IDLVLIEQLLRKICMDSEDGAILVFLPGW---EDINKTRDRLLANPFFRDTSKF 593
NPE +++ I Q++ IC +GAILVF+PG +D+NK L N + +
Sbjct: 380 NPESESLNVQFIAQVIEFICNTEPEGAILVFVPGLAQIQDLNK-----LLNSKTYGSRRN 434
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+IIP+HS++P+V QK+ F+RPPPG RKIIL+T+IAET+ITIDDVVYV+D GR+K K +D
Sbjct: 435 LIIPMHSILPTVNQKQAFQRPPPGVRKIILATSIAETSITIDDVVYVVDCGRLKAKGFDL 494
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
NV TL+ W + A+A+QR GRAGR Q G CY L+++ R + F +PE++R +EE+
Sbjct: 495 KKNVMTLEPEWETLANARQRRGRAGRIQPGKCYKLFTRAREETFEPFPIPEMQRTRLEEV 554
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
L K L I FL+K +DPP + I ++ +L I AL +E++T LG L L +
Sbjct: 555 ILHAKTLQLG-RIRPFLEKLMDPPDAEAINLSLKMLLTINALDNEERLTPLGYHLAKLPM 613
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
P KM+ L CLDP L++A +Y+DPF + K KF G +S
Sbjct: 614 DPQTGKMILMGALFSCLDPILSIAACLNYKDPFIFLLGSEYKVHEKRFKFS----RGEKS 669
Query: 834 DQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED-- 891
D + AF W+ A+ G F + ++S+ +++L M++Q L K FI D
Sbjct: 670 DHFMLSEAFREWEEAEYGGFGLNFAYENYLSNHNLHLLRSMKRQFARHLQKMNFIISDDP 729
Query: 892 -VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKN-----GRRFVETAGGAKVRLHPHS 945
+ ++N+ +I A++ +GLYP VA ++ K R +TA KV +H S
Sbjct: 730 KHPTSNYNSHNVSLIKALVCSGLYPNVAMIKKVVKKKTEGVSRVVWKTADHPKVEIHVKS 789
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
L K+ K + P +VY E + + + + T+V P+ LL + +
Sbjct: 790 LLEKV---KHFESPFLVYFEKIKS-SSIFLHDATMVYPMALLFFGERLNI 835
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 143/235 (60%), Gaps = 45/235 (19%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
E + + + +++++ R +LP + + +++NQ+++ISGETGCGKTTQV QF+
Sbjct: 146 EEINKKKGHSKHFQKMLDFRQRLPSFKKRKELVDLIENNQMIVISGETGCGKTTQVVQFV 205
Query: 226 LE-HIWSK-GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK--GGKHS 281
L+ +I+ K G C IVCTQPRRISA SVAER+++ER E IG+++GY IRLES+ K
Sbjct: 206 LDDYIFKKKGSLCNIVCTQPRRISAISVAERVALERDEKIGESVGYIIRLESEVPKRKSG 265
Query: 282 SIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR 341
SI + T GVL+++L S D + TH
Sbjct: 266 SITYVTTGVLVQMLQS----------------DPALKTH--------------------- 288
Query: 342 DMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
S P L+++LMSATL+ADRFS+YFGG P I++PGFTYPV+ YLE++L+ +K
Sbjct: 289 ----SRPDLKVVLMSATLNADRFSEYFGGIPRIEIPGFTYPVEEIYLENILTKMK 339
>gi|149018455|gb|EDL77096.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_b [Rattus
norvegicus]
Length = 1222
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 251/464 (54%), Gaps = 28/464 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 736
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 737 PMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 796
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 797 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 856
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 857 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 916
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 917 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 970
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 971 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 1029
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1030 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1089
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1090 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1130
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 386 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 444
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 445 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 504
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 505 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 564
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 565 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 610
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 611 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 665
>gi|449514314|ref|XP_002186930.2| PREDICTED: ATP-dependent RNA helicase DHX29 [Taeniopygia guttata]
Length = 1344
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 242/455 (53%), Gaps = 36/455 (7%)
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
+GA+L+FLPG I + D + + F + +I LHS++ + Q F PP G RK
Sbjct: 840 EGAVLIFLPGLAHIQQLYDLISTDRRFNLHDRHRLIALHSVLSTQDQAAAFTIPPLGIRK 899
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
I+L+TNIAET ITI DVV+VID+GR KE Y + +S+L+ ++VSKASA QR GRAGR
Sbjct: 900 IVLATNIAETGITIPDVVFVIDTGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGRV 959
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI---EDFLQKTLDPP 737
+ G C+ +Y++ R S ++ VPEI R+P+EELCL + C++ EDFL + LDPP
Sbjct: 960 RDGFCFRMYTRDRFESFMEYSVPEILRVPLEELCLHIM----KCSLGSPEDFLSRALDPP 1015
Query: 738 VSVTIRNAIIVLQDIGALSLDE-KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
I NA+ +L+ IGA L+E K+T LG+ L L V+ + KML F + CLDP TL
Sbjct: 1016 QQQVIGNAMNLLKKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1075
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG---Q 853
A + PFT PI R A +SL SD L + A+ WK A+Q G
Sbjct: 1076 AAVMTEKSPFTTPIG-----RKDEADLAKSSLAMAVSDHLTIYNAYLGWKRAQQEGGYRA 1130
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDVSSCSHNARVP-------GII 905
E +C + F++ + L ++++L + GF P N ++
Sbjct: 1131 EMTYCRRNFLNRTSLLTLEDVKQELIRVVRAAGFTAPSTQCGWDGNGVTQSLSLSEIALL 1190
Query: 906 HAVLMAGLYPMVARLRPPH-----KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL 960
AVL AGLY V ++ + VETA G K ++HP S+N L
Sbjct: 1191 KAVLTAGLYDNVGKILYAKSVDITEKLACTVETAQG-KAQVHPSSVNRDLQ-----TYGW 1244
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
++Y E R +++R T++ P P+LL +I V
Sbjct: 1245 LLYQEKVRY-AKVYLRETTLISPFPILLFGGDIEV 1278
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 149/232 (64%), Gaps = 21/232 (9%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L +++ + ++++ ER LP+ + I T+ ++VV+++GETG GK+TQVP FLLE
Sbjct: 526 LFKKLQNSSRYQRLLRERQDLPVFKHRYSIVETLKKHRVVVVAGETGSGKSTQVPHFLLE 585
Query: 228 HIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGKH 280
+ + C IVCTQPRRISA S+A R+ E G G GY+IR+ES+ G+
Sbjct: 586 DLLLDEGSKKCNIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEA 645
Query: 281 SSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII 340
+ +++CT GVLLR L G+ +S+++H+IVDE+HER SDF+L I+
Sbjct: 646 TRLLYCTTGVLLRKLQEDGL--------------LSSISHVIVDEVHERSVQSDFLLVIL 691
Query: 341 RDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
R++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F++EDV+
Sbjct: 692 REILHKRSDLHLILMSATVDSEKFSSYFSHCPILRISGRSYPVEIFHVEDVI 743
>gi|410951027|ref|XP_003982203.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 3 [Felis
catus]
Length = 1222
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 251/464 (54%), Gaps = 28/464 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 736
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 737 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 796
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 797 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 856
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 857 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 916
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 917 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 970
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 971 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1029
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1030 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1089
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1090 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1130
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP + +E A +V +
Sbjct: 386 IETFLNHYPVDSSWITPELRLQSDDVLPLGKDSGPLSDPITGKPYVPLSE-AEEVRLSQN 444
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 445 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 504
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 505 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 564
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 565 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 610
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 611 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 665
>gi|344236044|gb|EGV92147.1| Putative ATP-dependent RNA helicase DHX30 [Cricetulus griseus]
Length = 1194
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPLGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L + K G D I KP M +E A +V S
Sbjct: 358 IEAFLSHYPVDSSWISPELRLQNDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|281343609|gb|EFB19193.1| hypothetical protein PANDA_000638 [Ailuropoda melanoleuca]
Length = 1189
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 645 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 703
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 704 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 763
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 764 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 823
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 824 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 883
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 884 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 937
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 938 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 996
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 997 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1056
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1057 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1098
Score = 213 bits (541), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L + K G D I KP + +E A +V +
Sbjct: 353 IETFLNHYPVDSSWISPELRLQSEDVLPLGKDSGPLSDPITGKPYVPLSE-AEEVRLSQN 411
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 412 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 471
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 472 TEGRGARCNVIVTQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 531
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 532 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 577
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 578 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 632
>gi|301754093|ref|XP_002912819.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like [Ailuropoda
melanoleuca]
Length = 1194
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 212 bits (540), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L + K G D I KP + +E A +V +
Sbjct: 358 IETFLNHYPVDSSWISPELRLQSEDVLPLGKDSGPLSDPITGKPYVPLSE-AEEVRLSQN 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIVTQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|170587044|ref|XP_001898289.1| Probable ATP-dependent RNA helicase A [Brugia malayi]
gi|158594684|gb|EDP33268.1| Probable ATP-dependent RNA helicase A, putative [Brugia malayi]
Length = 1431
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 261/476 (54%), Gaps = 38/476 (7%)
Query: 538 VNPELIDLV--LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVI 595
++ ELI++V LIE LL I E+GA+L+FLPGW I + L ++P F + S FVI
Sbjct: 653 ISFELIEVVVELIEALLNDIVNKGEEGAVLIFLPGWNVIQLLLNFLKSHPVFSNESLFVI 712
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
+PLHS + +Q++VF+R PG RKIILSTNIAET+ITIDDVVYVIDS +++EK Y YN
Sbjct: 713 LPLHSQLTGQEQRRVFERHSPGVRKIILSTNIAETSITIDDVVYVIDSCKVREKMYTSYN 772
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
N+ + W S+ S QR GRAGR + G C+HL S+ R +L +++ E+ RIP+ E+ L
Sbjct: 773 NMVHYATVWASRTSIVQRRGRAGRTREGFCFHLCSKSRYEALEEYRTAEMLRIPLHEIAL 832
Query: 716 QVKLLDPNCNIEDFLQKTLDPP-------VSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
VKL+ +I DFL K ++PP V +R + QD+ AL + ++TELG L
Sbjct: 833 MVKLIGLG-SIGDFLAKAIEPPPIDSIIEAEVLLRGWLFQQQDMSALDSNSELTELGRIL 891
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA-KFELAS 827
L + P++ K L A + T++ AS + P+ +P + R T+ F+ S
Sbjct: 892 ARLPIEPVLGKTLILATACGIGELLATISAASSFATPY-IP-----RDRTTSKLSFQQRS 945
Query: 828 LYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G + SD +A+I + W A + E FC ++ ++S V+ M+ ++QL LI
Sbjct: 946 FSGNRFSDHIALICVYNRWCEAYDQDTIAEKDFCERFSLNSTVLRMIRVAKRQLTDTLIS 1005
Query: 885 NG-----FIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKV 939
G FIP +S+ ++ + +I ++L+ LYP V H +R V T A
Sbjct: 1006 CGFSESLFIPLAISNREPDSNL-DLILSLLVYALYPNVC-----HYRDKRRVYTLEQATA 1059
Query: 940 RLHPHSLNFKLSFKKTD----DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
+ S+N F +D PL V+ E R + + + + + PL LLL +
Sbjct: 1060 LMSKQSVN--TPFHSSDIIKFPSPLFVFSEKLRTE-IISCKQISNITPLQLLLFGS 1112
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 141/219 (64%), Gaps = 19/219 (8%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I +R LP+ ++D + + +N V ++ GETGCGK+TQV Q+LLEH + G
Sbjct: 397 IKTQRELLPVYQYRDQLIDAIRNNSVTIVKGETGCGKSTQVCQYLLEHYINNCHGAEFAA 456
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVS 297
TQPR+ISA ++AERI+ ERGE +G ++GY +R +S + + S++ T G+LL+ L
Sbjct: 457 FVTQPRKISAIALAERIADERGEQLGVSVGYAVRFDSLHPRPYGSLMLVTVGMLLKRL-- 514
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+ + ++HIIVDEIHERD +DF++ ++RDM+ YP+LR+ILMSA
Sbjct: 515 --------------ELGLRGISHIIVDEIHERDINTDFIMIVLRDMVNMYPNLRIILMSA 560
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
T+D + F+ YFG C VI + G +PV+ ++LED++ +++
Sbjct: 561 TVDTNLFTNYFGDCSVILLKGRNFPVQYYFLEDIVQMIR 599
>gi|149728692|ref|XP_001499652.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1 [Equus
caballus]
Length = 1194
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 358 IETFLNHYPVDTSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|148677080|gb|EDL09027.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Mus musculus]
Length = 1223
Score = 261 bits (666), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 266/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 647 VKEHYLEDILAKLGKHQYPHRHWHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 706
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 707 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAET 765
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 766 SITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 825
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 826 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 885
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 886 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 940
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 941 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAP 999
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 1000 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQ 1058
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1059 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1115
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1116 FVRDSSQVHPLAVLLLT 1132
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 387 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 445
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 446 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 505
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 506 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 565
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 566 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 611
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 612 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 666
>gi|410951023|ref|XP_003982201.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1 [Felis
catus]
Length = 1194
Score = 261 bits (666), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 213 bits (541), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP + +E A +V +
Sbjct: 358 IETFLNHYPVDSSWITPELRLQSDDVLPLGKDSGPLSDPITGKPYVPLSE-AEEVRLSQN 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|73985688|ref|XP_533844.2| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1 [Canis
lupus familiaris]
Length = 1194
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 179/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP + +E A +V +
Sbjct: 358 IETFLNHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYVPLSE-AEEVRLSQN 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
S +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 SEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|125986189|ref|XP_001356858.1| GA21700 [Drosophila pseudoobscura pseudoobscura]
gi|54645184|gb|EAL33924.1| GA21700 [Drosophila pseudoobscura pseudoobscura]
Length = 946
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 256/461 (55%), Gaps = 28/461 (6%)
Query: 544 DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP--FF---RDTSKFVIIPL 598
D+ I L+ IC + +GAILVFLPG++ I+K ++ L NP F R V+ PL
Sbjct: 411 DIDFIADLVYYICENEPEGAILVFLPGFDKISKL-NKALENPQGSFKGQRWRQSLVLYPL 469
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS++PSV+Q+ VF+RPP G RK+I+ST IAET++TIDDVVYVI+SGR K +YD +N+
Sbjct: 470 HSLMPSVEQQAVFRRPPAGKRKVIMSTIIAETSVTIDDVVYVINSGRTKASNYDIASNIQ 529
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
+L WVSKA+ +QR GRAGR + GICY+L+S+ R + D P+I R +E + L +K
Sbjct: 530 SLDEVWVSKANTQQRKGRAGRVRPGICYNLFSRAREDQMADIPTPDILRSKLESIILSLK 589
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
LL + N +FL + P I+N +++L +GAL + +T LG L L V P M
Sbjct: 590 LLHID-NPYEFLGTLISAPEQEAIKNGVLLLMRMGALDKEGILTPLGVHLAKLPVDPQMG 648
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
KM+ + L CLDP + A A Y+ PF P+ + R K ++A + +SD L V
Sbjct: 649 KMMLMSALFCCLDPITSAAAALSYKSPFYTPLGL--ESRVDQVKRQMA--HNMRSDHLMV 704
Query: 839 IAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSS 894
++ K RG FC ++S + L M+ Q L F+ D SS
Sbjct: 705 HNTICSYR--KSRGDRN-FCYTNYLSYMTLQQLERMKNQFAELLCNYKFLSSPGLLDKSS 761
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGRRFVE---TAGGAKVRLHPHSLNFK 949
++ ++P ++ A++ AGLYP +A +R +N R V T G +V HP S+N
Sbjct: 762 NINSDKIP-LLRAIIGAGLYPNMAYMRKTRRIRNSVRAVHNMSTDDGKRVNFHPSSVN-- 818
Query: 950 LSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
S + + D VY + + +++ + T+V P+ L++
Sbjct: 819 -SGESSFDSDYFVYYQRQKS-SSLYLLDSTMVFPMALIIFG 857
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 145/221 (65%), Gaps = 17/221 (7%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--E 234
N+R+ + R +LP + I V NQV+LI G TGCGKTTQVPQ LL+H KG
Sbjct: 146 NMRERLHARQQLPAMKHAEEIIRAVQQNQVILIVGSTGCGKTTQVPQLLLDHSIVKGCAS 205
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLR 293
C+I+CT+PRRISA ++AER+S ERGEN+G ++GY+IRLES+ + +SI +CT GVLL+
Sbjct: 206 DCRIICTEPRRISAITIAERVSYERGENLGVSVGYQIRLESRRPRDRASITYCTTGVLLQ 265
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
L S + + +L+ +I+DEIHER +D ++ +++ +LP P+L++I
Sbjct: 266 QLQSDPL--------------MHSLSVLILDEIHERSVETDLLMGLLKVILPHRPNLKVI 311
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
LMSAT+ F YF CP+ ++ G +PV+ YLEDVLS+
Sbjct: 312 LMSATVREQDFCDYFENCPMFRIEGVMFPVRMLYLEDVLSL 352
>gi|358248329|ref|NP_001239612.1| putative ATP-dependent RNA helicase DHX30 isoform 3 [Mus musculus]
gi|16740643|gb|AAH16202.1| Dhx30 protein [Mus musculus]
Length = 1223
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 679 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 737
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 738 PMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 797
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 798 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 857
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 858 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 917
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 918 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 971
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 972 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 1030
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1031 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1090
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1091 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1132
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 387 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 445
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 446 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 505
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 506 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 565
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 566 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 611
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 612 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 666
>gi|13278588|gb|AAH04082.1| Dhx30 protein, partial [Mus musculus]
Length = 921
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 377 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 435
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 436 PMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 495
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 496 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 555
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 556 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 615
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 616 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 669
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 670 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 728
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 729 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 788
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 789 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 830
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 85 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 143
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 144 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 203
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 204 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 263
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 264 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 309
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 310 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 364
>gi|255087578|ref|XP_002505712.1| predicted protein [Micromonas sp. RCC299]
gi|226520982|gb|ACO66970.1| predicted protein [Micromonas sp. RCC299]
Length = 1563
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 176/581 (30%), Positives = 280/581 (48%), Gaps = 101/581 (17%)
Query: 562 GAILVFLPGWEDINKTRDRL----LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPG 617
GA+LVF+PG +I K +L L +P D + ++PL+ + S Q+K+F+RPP G
Sbjct: 1041 GAVLVFMPGQFEITKLIRKLEQSRLLDPA--DVGELRVLPLYGSLSSKDQRKIFERPPKG 1098
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
RKI+++TNIAET++TIDDV YV+D+GR KE +D + +S L +WVS+A+AKQR GR+
Sbjct: 1099 VRKIVVATNIAETSVTIDDVRYVVDTGRAKEMCWDSHRGLSVLADTWVSQAAAKQRRGRS 1158
Query: 678 GRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
GR G + ++S+ + A++ Q PE+ R P+++LCL +K + P+ + L L PP
Sbjct: 1159 GRTAPGARFAMFSRAQFANMSPQQPPEMLRTPLQKLCLSIKAMAPDEPVARTLAAALTPP 1218
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
++ +A+ L+D+ A +DE++T LG L + V + KML F ++ CLDP LT+A
Sbjct: 1219 DVASVDSALAELKDLRAFDVDERLTPLGRHLAQMPVDARIGKMLLFGAMLGCLDPILTIA 1278
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ--EA 855
A R F P K AA +L +SD L ++AA+ W A+ G+ E
Sbjct: 1279 GAMSGRPLFYSP-----KDNRDAADKAKRALNSNKSDHLTMVAAYNGWVKARSSGKAAER 1333
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV--------------SSCSHNARV 901
+C +YF+S + + R L GF+ + + NA V
Sbjct: 1334 RYCDEYFLSQQALEAVQAGRLDYAAILADLGFVRREYIANMRRGSGGSNGGTEADSNADV 1393
Query: 902 PGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA------------------KVRLHP 943
++ A L+AG YP V R+R P ++ +T GGA +V LHP
Sbjct: 1394 VRVVKAALVAGFYPHVVRVRHPET---KYTQTQGGAVEKRHDSKDLRYFSKDLGRVFLHP 1450
Query: 944 HSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNED 1003
S+NF ++ +VY E +++R+ T+VG LLL ++ V
Sbjct: 1451 TSVNFHCGKYESR---WIVYSERVE-TAKVYIRDNTMVGSYALLLFGGDVRVL------- 1499
Query: 1004 DDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALD 1063
DE +++DD W F + A
Sbjct: 1500 ----------------HDEGLVKVDD------------------------WATFQAPARI 1519
Query: 1064 IAQIYCLRERLSVAILFKVTHPQKALP--PVLEASMYAMAS 1102
+ LR+R+ +L ++ HP L P++ A + +AS
Sbjct: 1520 GVLVKELRQRVDQLLLDRINHPSAHLASTPIVRALLELLAS 1560
Score = 186 bits (471), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/267 (40%), Positives = 153/267 (57%), Gaps = 35/267 (13%)
Query: 153 KPKMSKAEIAMKVESLTSRIEKDANLRQ--------IVEERSKLPISSFKDVITSTVDSN 204
+P MS AE+A++ + L+ + + ++ R LP S+ ++ +T V
Sbjct: 613 RPAMSPAELALENKRLSDALTAYTAAYKTGKGDGFAMMTARLNLPASNSREEVTRAVTGA 672
Query: 205 QVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
VV++SGETGCGK+TQVPQF+LEH +G IV TQPRRISA +AER++ ER E
Sbjct: 673 SVVVLSGETGCGKSTQVPQFILEHEIASGRGGVTNIVVTQPRRISAIGLAERVAAERCER 732
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
GD +GY +RLESK + ++FCT GVLLR L+S +S TH++
Sbjct: 733 CGDVVGYSVRLESKQCHRTRLLFCTTGVLLRRLLSDPT--------------LSNATHVV 778
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFG---------GCPV 373
+DE+HER SD +L ++R +L P L+++LMSAT DAD F YF G
Sbjct: 779 LDEVHERSVDSDLLLLLLRKVLAVRPALKVVLMSATADADLFDAYFRSPGPNAHVPGVST 838
Query: 374 IQV--PGFTYPVKSFYLEDVLSILKSA 398
QV PGFT+PV+ ++LEDV + A
Sbjct: 839 TQVHIPGFTHPVREYFLEDVFEMTGHA 865
>gi|348582380|ref|XP_003476954.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Cavia
porcellus]
Length = 1212
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 668 LDLDLVTDLVLHIDAHGEPGGILCFLPGWQEIKGVQQRL-QEALGIHESKYLILPVHSNI 726
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 727 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 786
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 787 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMP 846
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 847 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 906
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 907 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKAILSHDSGSDHLAFVRA 960
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 961 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 1019
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1020 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1079
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1080 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1121
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L + K G D I KP + +E A +V S
Sbjct: 376 IETFLNHYPVESSWLSPELRLQSEDILPLGKDSGPLSDPITGKPFVPLSE-AEEVRLSQS 434
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 435 LLELWRRRGPIWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 494
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 495 TEGRGAHCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 554
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 555 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 600
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 601 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 655
>gi|308802111|ref|XP_003078369.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus
tauri]
gi|116056821|emb|CAL53110.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus
tauri]
Length = 1262
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 172/491 (35%), Positives = 255/491 (51%), Gaps = 43/491 (8%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF--VIIPLH 599
LI+ L+ +L+ IC GAILVF+PG +I K + N + +I LH
Sbjct: 709 LINYELMTKLISHICESMGPGAILVFMPGLAEITKLYEACGDNAAVSAATAGGKYLIALH 768
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
S + + +Q VF P G RKI+++TNIAET+ITIDDVVYV+DSG+ KE YDP +
Sbjct: 769 STLSTAEQGIVFDHAPEGVRKIVIATNIAETSITIDDVVYVVDSGKCKENGYDPNTRMQL 828
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVK 718
L WVS+ASA+QR GRAGR QAG C+ +YS+ + + +PEI+R+P+E LCLQ++
Sbjct: 829 LLEQWVSRASARQRRGRAGRVQAGRCFRMYSRHVHDKVFAEHTLPEIRRVPLEGLCLQIQ 888
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
L I FL K L+PP ++ A+ L+ +GAL E +T LG+ L L V +
Sbjct: 889 LQRMAGGIAGFLSKALEPPKVESVETAVAALKQLGALDERENLTPLGQHLATLPVDVRVG 948
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
KML + ++ CLDP LT+A R PF P+ +++ A AK A QSD L +
Sbjct: 949 KMLLYGSMLGCLDPVLTIAAVLSGRSPFVAPL--DKRDEADLAKKLFAE---DQSDHLTI 1003
Query: 839 IAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS 896
+ A+ W+ AKQ G+ E F + F+S + + +R Q L ++GF+ +
Sbjct: 1004 LNAYNGWQEAKQAGRSSEFTFTRENFLSWRALEGIADLRTQFTQLLNESGFLASNGKKKR 1063
Query: 897 HNARVPG------------------------IIHAVLMAGLYPMVARLRPPHKNG----- 927
AR G ++ ++L+AGLYP + ++ P +
Sbjct: 1064 DGARYRGRQRGALLKTDPEWVKANRNADNKRLLKSILVAGLYPNLIKVEPGFRADAPPRL 1123
Query: 928 RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
E K+++HP S+NF+ K +VY E + ++VR+CT V P LL
Sbjct: 1124 TFLAENGRTEKIQIHPSSVNFE---AKKFITKWLVYHERVQ-TTAIYVRDCTAVTPYQLL 1179
Query: 988 LLATEIAVAPA 998
L +I V A
Sbjct: 1180 LFGGKIEVQHA 1190
Score = 220 bits (560), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 147/217 (67%), Gaps = 17/217 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-IW-SKGETCKI 238
I+ +R +LP + + + V+ +QV++++GETGCGKTTQ+PQF+L++ IW +G +
Sbjct: 441 ILRQRQRLPAWAKQQELIDAVERHQVLIVAGETGCGKTTQLPQFILDNAIWQGRGAVTNM 500
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISATSVA R++ ERGE +G +GYKIRLE + I+FCT GVLLR L
Sbjct: 501 ICTQPRRISATSVAARVANERGEQLGKTVGYKIRLEGSMSSSTRILFCTTGVLLRRL--- 557
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
+ P DVS H+IVDE+HER SDF+L ++RD+LP P L+++LMSAT
Sbjct: 558 --------TEDPLLSDVS---HVIVDEVHERSLDSDFLLVLLRDILPHRPTLKVVLMSAT 606
Query: 359 LDADRFSQYF-GGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+A F YF G C V Q+PGFTYPV YLED+L +
Sbjct: 607 LNALAFEDYFKGNCAVSQIPGFTYPVSEHYLEDILQV 643
>gi|358248315|ref|NP_001239611.1| putative ATP-dependent RNA helicase DHX30 isoform 1 [Mus musculus]
Length = 1194
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 358 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|61557430|ref|NP_001013267.1| putative ATP-dependent RNA helicase DHX30 [Rattus norvegicus]
gi|81909465|sp|Q5BJS0.1|DHX30_RAT RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|60551861|gb|AAH91359.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Rattus norvegicus]
Length = 1194
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 358 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|431905133|gb|ELK10188.1| Putative ATP-dependent RNA helicase DHX30 [Pteropus alecto]
Length = 1219
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 251/464 (54%), Gaps = 28/464 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 675 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGVHESKYLILPVHSNI 733
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 734 PMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 793
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 794 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 853
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 854 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 913
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 914 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 967
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 968 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1026
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1027 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1086
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1087 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1127
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 177/288 (61%), Gaps = 21/288 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L + K G D I KP + +E + +V S
Sbjct: 383 IETFLNHYPVDSSWISPELRLQGDDILPLGKDSGPLSDPITGKPYVPLSE-SEEVRLSQS 441
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 442 LLELWRRRGPIWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 501
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 502 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 561
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 562 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 607
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK +YLED+L+ L
Sbjct: 608 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEYYLEDILAKL 655
>gi|401422232|ref|XP_003875604.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491842|emb|CBZ27115.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1087
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 259/492 (52%), Gaps = 27/492 (5%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDG--AILVFLPGWEDINKTR 578
AL + +K + D + V L+ L+ L++KI +S +ILVFLPGW I+
Sbjct: 372 ALYEQLKSVVFDTFDRDVEG-LVPYDLVCDLIKKIHDESRSHVESILVFLPGWAAISCIA 430
Query: 579 DRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
+RL + F R+ S I+ LHS + + +Q++VF+RPP RKI+L+T+IAET+ITIDD+V
Sbjct: 431 NRLKRSQFARELS---ILMLHSSLTTAEQQRVFERPPKHYRKIVLATSIAETSITIDDIV 487
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLP 698
YVID G +K SYDP N S L+++ + KA+ QR GRAGRCQAG+CYHL + LP
Sbjct: 488 YVIDCGLVKGTSYDPMGNTSALKATLIGKANGVQRRGRAGRCQAGVCYHLLPKAVYDDLP 547
Query: 699 DFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
F PEI R P+EE+CLQ+K ++ N L + + P + I +A+ L D+GA +++
Sbjct: 548 GFLPPEIVRSPLEEVCLQLKAIESNQKCAQVLSRAMSAPPTEAIEHAVQFLTDMGAFTVE 607
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
EK+T LG L L HPL+ KMLF A LD T+A + PF I P +++
Sbjct: 608 EKMTNLGRALAALPTHPLLGKMLFTAACFGVLDTVATIAAGLSVKTPF---IRPQAFEKS 664
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
+A + L SD V+ F W + G+ + + +F + + L ++Q
Sbjct: 665 SAKENLLRMDNNALSDHFCVVTLFTEWIRS---GRSLHYATSHFADNTTLRSLERTKQQF 721
Query: 879 QTELIKNGFIPEDVSSCSHNARVP---GIIHAVLMAGLYPMVA----RLRPPHKNGRRFV 931
++++ F VS +H +R G++ VL+ LYP +A R +N + F
Sbjct: 722 IRLVLQSSFAKGIVSPEAHFSRYASNRGLVRLVLLWSLYPRLATIEYRANRGGQNPQVFC 781
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDC---PLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
A S+N L F + D +VY + + + V + T V P+ ++L
Sbjct: 782 WDNKAAVF-----SMNSVLGFYRRRDFGANSFIVYYDRMNLEAMLSVFDATAVSPIDVVL 836
Query: 989 LATEIAVAPAPD 1000
++ V P D
Sbjct: 837 CLRQLTVRPLLD 848
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 186/372 (50%), Gaps = 60/372 (16%)
Query: 60 VVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFT 119
+VH + + KSSG G R + + K RV+ K ++ +EG V
Sbjct: 1 MVHRIAMSFNLDHKSSGEGASRALKLTKIGGRVDALKRQQ-----DAAEGGVRV------ 49
Query: 120 HYPPDDGEPG-EKLDANQSRKSD--------KTRGKRVDIFCKPKMSKAEIAMKVE---- 166
DG G +KL+ + +SD K +R+ K +++ K
Sbjct: 50 --KTIDGYQGAQKLEHDHLSESDILSLEDKLKPHKRRMAAAIKAVVNEPAWERKCFRVVQ 107
Query: 167 ---SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQ 223
S+ ++ + + ++ + R LP I +V N VV++ G+TGCGKTTQ+PQ
Sbjct: 108 GGLSVVPKLSRPVDCARLNQFRMSLPAYRHGPQIIQSVQENSVVIVCGDTGCGKTTQIPQ 167
Query: 224 FLLEH-IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS 282
L + I+ K ++CTQPRRISA SVA+R++ ERGE GD+ GY IR E+ +S
Sbjct: 168 LLYDAGIFDKHH--DVICTQPRRISALSVAQRVATERGEACGDSCGYVIRFENMTSANSH 225
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
I++ T G+LLR L S+ D+ + ++VDE+HERD +DF L ++RD
Sbjct: 226 IIYQTTGILLRRLHSE--------------PDLRGVACVVVDEVHERDVETDFCLLLLRD 271
Query: 343 MLPS-------YP-HLRLILMSATLDADRFSQYFGG------CPVIQVPGFTYPVKSFYL 388
L + YP L+L++MSAT+ D YF G P+I +PG +PV+ F+L
Sbjct: 272 RLRAQQEHPERYPLQLKLVVMSATVQVDALVSYFSGYNSGRDIPLITIPGTLFPVREFFL 331
Query: 389 EDVLSILKSAES 400
ED L + ++ S
Sbjct: 332 EDALRKVGASAS 343
>gi|74150511|dbj|BAE32286.1| unnamed protein product [Mus musculus]
Length = 1194
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 266/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYPHRHWHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 358 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|332816780|ref|XP_001155300.2| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 5 [Pan
troglodytes]
Length = 1265
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 265/496 (53%), Gaps = 31/496 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 689 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 748
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 749 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 807
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 808 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 867
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 868 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 927
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 928 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 982
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + + K + SD LA + A W+ + R + + + +
Sbjct: 983 -SSSLQTKGEVDKXXTLLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 1041
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 1042 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1100
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1101 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1157
Query: 974 HVRNCTVVGPLPLLLL 989
VR+ + V PL +LLL
Sbjct: 1158 FVRDSSQVHPLAVLLL 1173
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 429 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 487
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 488 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 547
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 548 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 607
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 608 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 653
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 654 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 708
>gi|19111156|ref|NP_579925.1| putative ATP-dependent RNA helicase DHX30 isoform 2 [Mus musculus]
gi|81916736|sp|Q99PU8.1|DHX30_MOUSE RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|13111310|dbj|BAB32789.1| HELG [Mus musculus musculus]
Length = 1217
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 673 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 731
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 732 PMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 791
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 792 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 851
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 852 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 911
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 912 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 965
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 966 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 1024
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1025 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1084
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1085 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1126
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 381 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 439
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 440 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 499
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 500 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 559
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 560 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 605
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 606 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 660
>gi|291393602|ref|XP_002713384.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Oryctolagus
cuniculus]
Length = 1264
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 720 LDLDLVTDLVLHIDACGEPGGILCFLPGWQEIRGVQQRL-QEALGLHESKYLILPVHSNI 778
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 779 PMMDQKAIFQQPPAGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 838
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 839 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 898
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 899 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 958
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 959 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 1012
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 1013 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLVKQF-SENIYEAFLVGKPSDCTLP 1071
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1072 SAQCNEYSAEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1131
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1132 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1173
Score = 213 bits (541), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 177/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L + K G D I KP + +E A +V S
Sbjct: 428 IETFLNHYPVDSSWISPELRLQGDDILPLSKDSGPLSDPITGKPYVPLSE-AEEVRLSQS 486
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 487 LLELWRRRGPVWQETPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 546
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 547 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 606
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 607 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 652
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L L + H
Sbjct: 653 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILVKLGKHQYPH 707
>gi|417413631|gb|JAA53134.1| Putative dosage compensation complex subunit mle, partial [Desmodus
rotundus]
Length = 1201
Score = 259 bits (661), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 250/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 657 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGVHESKYLILPVHSNI 715
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 716 PMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 775
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 776 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 835
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 836 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQQEYLTTLGQRLAHISTDPRLAKAIV 895
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + SD LA + A
Sbjct: 896 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSQDSGSDHLAFVRA 949
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 950 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1008
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1009 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1068
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LL+
Sbjct: 1069 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLMT 1110
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D+ P +L ++ K G D I KP +E A +V S
Sbjct: 365 IETFLNHYPVDNSWISPELRLQSDDILPLGKDSGPLSDPITGKPYTPLSE-AEEVRLSQS 423
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 424 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 483
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G + N+G+++RLESK + +++FCT
Sbjct: 484 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCT 543
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H++VDE+HERD +DF+L +++ +
Sbjct: 544 VGILLRKLQSN-----------PSLEGVS---HVVVDEVHERDVNTDFLLILLKGLQRLN 589
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 590 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 644
>gi|74226873|dbj|BAE27081.1| unnamed protein product [Mus musculus]
Length = 1194
Score = 259 bits (661), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 266/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYPHRHWHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITVNDIVHVVDSGLHKEERYDLRTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ + + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSQLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLHAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 358 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>gi|389593045|ref|XP_001683301.2| putative ATP-dependent DEAD/H RNA helicase [Leishmania major strain
Friedlin]
gi|321399748|emb|CAJ04816.2| putative ATP-dependent DEAD/H RNA helicase [Leishmania major strain
Friedlin]
Length = 1087
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 263/511 (51%), Gaps = 27/511 (5%)
Query: 499 LQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMD 558
L L +++ A+ + AL + +K + D + V L+ L+ L++KI +
Sbjct: 350 LLLNQKQEAQRSAETPEAEGNAALYEQLKSVVFDTFDRDVE-GLVPYDLVCDLIKKIHDE 408
Query: 559 SEDGA--ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
S A ILVFLPGW I+ +RL + F R+ S I+ LHS + + +Q++VF+RPP
Sbjct: 409 SRSHAESILVFLPGWAAISCIANRLKRSQFARELS---ILMLHSSLTTSEQQRVFERPPK 465
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
RKI+L+T+IAET+ITIDD+VYVIDSG +K SYDP N S L+++ + KA+ QR GR
Sbjct: 466 HYRKIVLATSIAETSITIDDIVYVIDSGLVKGTSYDPMGNTSALKATLIGKANGVQRRGR 525
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDP 736
AGRCQ G+CYHL + LP F PEI R P+EE+CLQ+K ++ N L + +
Sbjct: 526 AGRCQPGVCYHLLPKAVYDDLPGFLPPEIVRSPLEEVCLQLKAIESNQKCAQVLSRAMSA 585
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P + I +A+ L D+GA + +EK+T LG L L HPL+ KMLF A LD T+
Sbjct: 586 PPTEAIEHAVQFLTDMGAFTTEEKMTNLGRALAALPTHPLLGKMLFTAACFGVLDTVATI 645
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW 856
A + PF I P ++ +A + L SD V+ F W + G+
Sbjct: 646 AAGLSVKTPF---IRPQAFEKNSAKENLLRIDDNALSDHFCVVTLFSGWIRS---GRSLH 699
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP---GIIHAVLMAGL 913
+ + +F + + L + Q ++++ F VS +H +R G++ VL+ L
Sbjct: 700 YATSHFADNNTLRSLERTKLQFIRLVLQSSFAKGIVSPEAHFSRYASNRGLVRLVLLWSL 759
Query: 914 YPMVA----RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC---PLMVYDEI 966
YP +A R +N + F A S+N L F + D +VY +
Sbjct: 760 YPRLATIEYRANRGSQNPQVFCWDNKAAVF-----SMNSVLGFYRRRDFGANSFIVYYDR 814
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLATEIAVAP 997
+ + V + T V P+ ++L ++ V P
Sbjct: 815 MNLEAMLSVFDATAVSPIDVVLCLRQLTVRP 845
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 183/357 (51%), Gaps = 46/357 (12%)
Query: 60 VVHEVCKKMGMTSKSSGRGKQRRVSVCKS-------KKRVETDKGKEILPSLTFSEGSKL 112
+VH + + KSSG G R + + K K++ + +G + ++ +G++
Sbjct: 1 MVHRIAMSFNLDHKSSGEGASRALKLTKIGGIVDALKRQQDAAEGGVRVKTIDGYQGAQK 60
Query: 113 VLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTS-- 170
+ D + D +KL ++S + + + + +P + + + L++
Sbjct: 61 LEHDHLSE--SDILSLEDKLKPHKSSMAAEIKA----VVNEPALERKCFRVVQGGLSAVP 114
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-I 229
++ + Q+ R LP I +V N VV+I G+TGCGKTTQ+PQ L + I
Sbjct: 115 KLSWPVDRAQLNRFRMSLPAYRHGPHIIQSVQENSVVVICGDTGCGKTTQIPQMLYDAGI 174
Query: 230 WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNG 289
+ K ++CTQPRRISA SVA+R++ ERGE GD+ GY IR E+ S I++ T G
Sbjct: 175 FDKHH--DVICTQPRRISALSVAQRVATERGEACGDSCGYVIRFENMTSASSHIIYQTTG 232
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS--- 346
+LLR L ++ D+ + ++VDE+HERD +DF L ++RD L +
Sbjct: 233 ILLRRLHTE--------------PDLKGVACVVVDEVHERDVETDFCLLLLRDRLRAQQE 278
Query: 347 YP-----HLRLILMSATLDADRFSQYFGG------CPVIQVPGFTYPVKSFYLEDVL 392
YP L+L++MSAT+ D YF G P+I +PG +PV+ F+LEDVL
Sbjct: 279 YPGRYPLQLKLVVMSATVQVDALVSYFSGYNSGRDIPLITIPGTLFPVREFFLEDVL 335
>gi|403268852|ref|XP_003926478.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Saimiri
boliviensis boliviensis]
Length = 1273
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 251/464 (54%), Gaps = 28/464 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 729 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 787
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 788 PMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 847
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 848 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 907
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 908 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 967
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 968 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 1021
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 1022 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1080
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1081 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1140
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1141 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1181
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 176/288 (61%), Gaps = 21/288 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP D P +L ++ K G D I KP + E A +V S
Sbjct: 437 IETFLNHYPVDSSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 495
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 496 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 555
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 556 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 615
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 616 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 661
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L
Sbjct: 662 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKL 709
>gi|441611780|ref|XP_003257352.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DHX30 [Nomascus leucogenys]
Length = 1220
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/422 (36%), Positives = 237/422 (56%), Gaps = 22/422 (5%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 690 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 749
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 750 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 808
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 809 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 868
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 869 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 928
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 929 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 983
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 984 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 1042
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 1043 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1101
Query: 920 LR 921
+R
Sbjct: 1102 VR 1103
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 430 IETFLNHYPVESSWITPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 488
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 489 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 548
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 549 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 608
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 609 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 654
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 655 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 709
>gi|157134931|ref|XP_001663363.1| ATP-dependent RNA helicase [Aedes aegypti]
gi|108870366|gb|EAT34591.1| AAEL013182-PA [Aedes aegypti]
Length = 1281
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 264/505 (52%), Gaps = 59/505 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED------GAILVFLPGWEDINKTRDRLLANPF 586
K L ++P I+ LIE +LR I + D G+I++FLPG +I + L +
Sbjct: 712 KTLYLMDPLRINPELIEHVLRYIVEGTTDHGWPQEGSIVIFLPGLAEIQTIHEALTDSKL 771
Query: 587 FR-DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
F KF+++PLHS + + +Q VF++ P G RKI+LSTNIAET++TIDD V+VID G+
Sbjct: 772 FGPREGKFILVPLHSTLTNEEQALVFRKAPKGKRKIVLSTNIAETSVTIDDCVFVIDCGQ 831
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPE 704
MKEK +D N+ +L+ WVS+A+A QR GRAGR G+C HL+++ R + Q VPE
Sbjct: 832 MKEKRFDSNRNMESLEVVWVSRANALQRKGRAGRVMPGVCIHLFTRPRFTNHILGQPVPE 891
Query: 705 IKRIPIEELCLQVKLLDP--NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
I RIP+E L L++K LD ++++ L T++PP I A L D+GA L E +T
Sbjct: 892 IHRIPLEPLLLRIKTLDTLQGSSLKEVLMATIEPPSEENIEAAKKRLIDVGAFDLGENLT 951
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
LG L L V + K++ F + CLD LT+A ++ PF P S ++ A +
Sbjct: 952 SLGHHLATLPVDVRIGKLMLFGAIFQCLDSVLTIAACLSFKSPFVSPFSKRDEADARKRQ 1011
Query: 823 FELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFC--SQYFVSSGVMNMLLGMRKQLQT 880
F +A+ SD L ++ A+ WK +R + A C + ++S+ + + M+ Q
Sbjct: 1012 FGIAN-----SDHLTMLNAYRKWKETTKRSRYAAHCYAEENYLSTKTLQTIGEMKYQFLE 1066
Query: 881 ELIKNGFIPEDVSS-----------------CSHNARVPGIIHAVLMAGLYPMVARLRPP 923
L+ GF+P D+S + N ++ A+L A LYP V ++ P
Sbjct: 1067 LLVSIGFVPVDLSGRRGKFVKDELLELTGPDINANGENNRLLAAILCAALYPNVIKVLTP 1126
Query: 924 HKNGRRFVETAGGAKVR------------------LHPHSLNFKLSFKKTDDCPLMVYDE 965
K+ F+ AGGA R LHP S+N + + P +VY E
Sbjct: 1127 EKS---FISGAGGAVPRLPQPSDLRFKTQQDGYVFLHPSSINSRFGHFNS---PFLVYQE 1180
Query: 966 ITRGDGGMHVRNCTVVGPLPLLLLA 990
+ +++R T+V LP++L +
Sbjct: 1181 KVK-TSRIYIRETTMVPLLPMVLFS 1204
Score = 186 bits (473), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 147/228 (64%), Gaps = 23/228 (10%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW-- 230
+ + + ++ R +LP S I S ++S+ V++ISGETGCGK+TQVPQF+L++ W
Sbjct: 432 QNNGAYKDMLRHRKQLPAWSKMSDIISAMESHSVLVISGETGCGKSTQVPQFILDN-WLY 490
Query: 231 ------SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
K +I+CTQPRRISA VAER++ ER E IG+ +GY+IRLE+K + +
Sbjct: 491 QSSKLDGKVPHVEIICTQPRRISAIGVAERVAEERVEKIGNTVGYQIRLENKISSSTRLT 550
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT G+LLR L S+ +S +THI+VDE+HER SDF+L I++ +L
Sbjct: 551 FCTTGILLRRLQSEPT--------------LSNVTHILVDEVHERSEESDFLLLILKQLL 596
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
L++ILMSATL+++ FS YFG PV+ +PG T+PV+ +LED+L
Sbjct: 597 EKRSDLKVILMSATLNSNLFSSYFGDVPVLDIPGRTFPVEQLFLEDIL 644
>gi|198433186|ref|XP_002123879.1| PREDICTED: similar to ATP-dependent RNA helicase [Ciona intestinalis]
Length = 986
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 261/487 (53%), Gaps = 51/487 (10%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ-QKKVFKRPPPGCRK 620
G+ILVFLPG+++I RDR++ + T I L+S ++ +++K G RK
Sbjct: 425 GSILVFLPGYDEIITLRDRIIHSNKVNRTCNLNIFILYSSTYTLSDHSQIYKPEEEGTRK 484
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV-------STLQSSWVSKASAKQR 673
IILSTN+AE+ IT+DDV +VID GR NNV S+ + W+S+ S+K+R
Sbjct: 485 IILSTNVAESCITVDDVCHVIDLGR---------NNVTNTMYQESSRKIEWISQVSSKKR 535
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
RAG+ +G+C+HL+S+ R P +PE+ RI + EL LQ+KLLD + ++ FL +
Sbjct: 536 CYRAGKQGSGVCFHLFSKARKLG-P--LIPELTRIQLYELILQIKLLDTSDPVKHFLTHS 592
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
+DPP TI NA+ +L+ I AL +TELG+ L L + P + KM+ +A+++ CLDP
Sbjct: 593 IDPPNVETIDNAVQLLKQIDALDETSNITELGQHLVDLPIDPRLGKMILYAVVLKCLDPI 652
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
LT+ACA + D F + SP + + + A+ G SD + ++ AF+ W+ A+ G
Sbjct: 653 LTIACALTFNDSF-IEASPCIAREVINTRCKFAA--GTYSDHMCLLRAFQAWQKARCDGW 709
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVL 909
E FC +YF+S M ++G+R QL +L GF+ D+ + N+ ++ A +
Sbjct: 710 EKRFCDKYFMSLATMEKIIGLRSQLLGQLRATGFVRARGGSDIRDLNLNSENWAVVKAAV 769
Query: 910 MAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK-------TDDCP--L 960
G++P +A++ ++ + + K++ HP S+ K S K D+ P
Sbjct: 770 CVGMHPNIAQV----DRCKKIIRISQNEKLQFHPSSVLTKDSCGKELGNNHAIDNLPSDW 825
Query: 961 MVYDEITRGDGGMHVRNCTVVGPLPLLLLA-----TEIAVAPAPDNEDDDEDDDMSDDDA 1015
++++E GD GM CT V + + L TE P + DDD S D
Sbjct: 826 IMFNEKINGDDGMIATCCTCVTSVCVALFTGTSSLTEAEYVSGPTS--GIYDDDCSSD-- 881
Query: 1016 DENESDE 1022
NESDE
Sbjct: 882 --NESDE 886
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 178/330 (53%), Gaps = 32/330 (9%)
Query: 48 TFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLT-F 106
T ++L+N ERA VH + G+ SKS G+G R V + K ++R D P L
Sbjct: 32 TLPSSLTNHERAYVHRMSSSYGVISKSVGQGTSRYVVLHKVQERNIVDT-----PLLCKL 86
Query: 107 SEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVE 166
S+ SK VLQ L +P +P EK+ +S + +K G + + + +
Sbjct: 87 SQTSKWVLQSLLARWP---SKPKEKI---ESLRPEKNCGVKFGYYADITKPSGRLPNGIP 140
Query: 167 SLTSRIEKDANLRQIVEE-RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
+ S L Q + +S LPI S K I T+ N VLI+G+ GCGK+TQ+PQ++
Sbjct: 141 QIPS-----PCLTQTFDSFQSNLPIYSKKSEILETIWKNDTVLIAGKPGCGKSTQLPQYI 195
Query: 226 LEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVF 285
L+ + + C+I+C QPRR A S+AER++ ERGE +G +GY+IRLES+ + + F
Sbjct: 196 LDESLKQKQVCRIICVQPRRSLAVSMAERVAKERGECVGQTVGYQIRLESRASPRTLLTF 255
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CTN VLLR L++ G S L+ +THII+DEI ERD++ D +L +R ++P
Sbjct: 256 CTNEVLLRTLMA-GQSVLQ------------TMTHIIMDEIQERDKFGDILLIRLRQLIP 302
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQ 375
++ L+L + D Y CPVI+
Sbjct: 303 NHT-FHLLLNTCDTDNMMLINYLQPCPVIK 331
>gi|195387363|ref|XP_002052365.1| GJ22099 [Drosophila virilis]
gi|194148822|gb|EDW64520.1| GJ22099 [Drosophila virilis]
Length = 931
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 274/514 (53%), Gaps = 35/514 (6%)
Query: 493 KDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLL 552
K+ R + + +++P + I++ + D ++L++ + D+ I L+
Sbjct: 346 KNKRARPRSDQSDHRPMIEPYIRR-----VRDRYDSKVLEQLRLPCSEGCADIDFIANLI 400
Query: 553 RKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF----RDTSKFVIIPLHSMVPSVQQK 608
IC +GAILVF+PG+ I++ + LL NP R ++ PLHSM+PSV+Q+
Sbjct: 401 YYICTMKSEGAILVFVPGYSQISELHNTLL-NPRLALGQRWRDHLLVYPLHSMLPSVEQQ 459
Query: 609 KVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
VF+R P G RK+I+ST IAET++TIDDVVYVI++GR K SYD N+ +L+ WV+ A
Sbjct: 460 SVFRRAPSGKRKVIISTIIAETSVTIDDVVYVINTGRTKVSSYDIETNIQSLEECWVTHA 519
Query: 669 SAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED 728
+ +QR GRAGR Q GICY+L+S+ R A + + PEI R +E + L +KLL +I+D
Sbjct: 520 NTQQRKGRAGRVQPGICYNLFSRAREALMSEVPTPEILRSKLESIILSLKLL----HIDD 575
Query: 729 ---FLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAI 785
F +D P + AI +L I AL ++T LG L + + P M KM+ +
Sbjct: 576 PYAFFPTMIDAPAQKAVSTAINLLNRIEALDNHGQLTPLGMHLARMPIDPQMGKMILISA 635
Query: 786 LMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW 845
L CLDP ++A A Y+ PF P+ ++++R AK L+ +SD + + +
Sbjct: 636 LFRCLDPITSVAAALSYKSPFYTPM--DKEQRVDEAKRRLSQ--NMRSDHIMLHYTICGY 691
Query: 846 KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARV 901
+ ++Q ++ FC F+S + L M++Q L + F+ D SS ++ ++
Sbjct: 692 RESRQAHRDRDFCYNNFLSKMTLQQLERMKQQFSELLYNSKFLTSTNCMDESSNMNSEKI 751
Query: 902 PGIIHAVLMAGLYPMVARLRPPH--KNGRRFVE---TAGGAKVRLHPHSLNFKLSFKKTD 956
P ++ A++ GLYP +A L KN R + T G +V HP S+N S K
Sbjct: 752 P-LLRAIIGGGLYPNMAHLCTSRQIKNRVRAIHKMFTDDGRRVNFHPSSVN---SGKSGF 807
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
D VY + + + + + T+V P+ L++
Sbjct: 808 DSNYFVYFQRQKS-TDLFLLDATMVFPMALIIFG 840
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 155/245 (63%), Gaps = 17/245 (6%)
Query: 155 KMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETG 214
++ + + ++E L + A+ ++ +ER KLP S I V+ NQV+LI G TG
Sbjct: 109 QLRNSSLDAQLEELQRERFQRADFQERYKERMKLPTMSHAAEIIKAVEKNQVLLIVGSTG 168
Query: 215 CGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
CGKTTQVPQ LL+ SKG C+IVCTQPRRISA +VAER+S ER E +G ++GY+IR
Sbjct: 169 CGKTTQVPQLLLDDSISKGMGSGCRIVCTQPRRISAITVAERVSYERAEALGHSVGYQIR 228
Query: 273 LES-KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
LES K + +SI +CT G+LL+ L QG P +VS L ++DEIHER
Sbjct: 229 LESCKPRERASITYCTTGILLQQL--QG---------DPLLHNVSVL---LLDEIHERSV 274
Query: 332 YSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+D ++A+++ +LP P L++ILMSAT+ F YF CP+ ++ G +PV+ YLEDV
Sbjct: 275 ETDLLMALLKIILPHRPALKVILMSATVREQDFCNYFNTCPMFRIEGVMHPVEMLYLEDV 334
Query: 392 LSILK 396
L++ K
Sbjct: 335 LALTK 339
>gi|149497585|ref|XP_001517092.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like, partial
[Ornithorhynchus anatinus]
Length = 1142
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 259/490 (52%), Gaps = 32/490 (6%)
Query: 519 ENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTR 578
E+ L + + + +++ + E +DL L+ L+ I G IL FLPGW++I +
Sbjct: 574 EHYLEEILAKLGKNRHYEVRDDEQLDLELVTDLIVHIDAHEAPGGILCFLPGWQEIKSVQ 633
Query: 579 DRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET+IT++D+V
Sbjct: 634 QRL-QETLGSQESKYLILPVHSNIPMMDQKAIFQQPPAGVRKIVLATNIAETSITVNDIV 692
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLP 698
+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+ + R +
Sbjct: 693 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGYAYHLFPRSRLEKMA 752
Query: 699 DFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
FQVPEI R P+E L LQ K+ P +FL + + P + A+ +LQ+IG L
Sbjct: 753 PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSEAVSSPDRQAVAEAVRLLQEIGVLDRQ 812
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKR 817
E +T LG +L ++ P ++K + A + CL P L ++C + RDPF S + + R
Sbjct: 813 EFLTALGRRLTPIATEPHLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNR 866
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGM 874
A K + + SD LA + A W+ + R + + + + + + G+
Sbjct: 867 AAVQKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRDSRESYLEENLLYAPSLRFIHGL 926
Query: 875 RKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVARLRPP---- 923
KQ +E I F+ P D + C+ + ++ VLMAGLYP + ++R
Sbjct: 927 IKQF-SENIYEAFLVGKPSDCTLPSAQCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTR 985
Query: 924 ----HKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCT 979
N + AG V LH ++N + + ++ + Y + +G + VR+ +
Sbjct: 986 QGKFKPNSASYRTKAGN--VLLHRSTINREATRLRSR---WLTYFMAVKSNGSVFVRDSS 1040
Query: 980 VVGPLPLLLL 989
V PL +LLL
Sbjct: 1041 QVHPLAVLLL 1050
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 149/216 (68%), Gaps = 17/216 (7%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
+E +LP+ +D I S ++ + VV+I+G+TGCGKTT++PQ LLE + +G C ++
Sbjct: 383 QEAHQLPVDPHRDAILSAIEEHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGALCNVII 442
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVSQG 299
TQPRRISA SVA+R+ E G ++ N+G+++RLESK + +++FCT GVLLR L S
Sbjct: 443 TQPRRISAVSVAQRVGHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGVLLRKLQS-- 500
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P+ + VS H+IVDE+HERD +DF+L +++ + P LRL+LMSAT
Sbjct: 501 ---------NPSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLNPGLRLVLMSATG 548
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
D +RF++YFGGCPVI+VPGF YPVK YLE++L+ L
Sbjct: 549 DNERFARYFGGCPVIKVPGFMYPVKEHYLEEILAKL 584
>gi|145344470|ref|XP_001416755.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576981|gb|ABO95048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 936
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 258/487 (52%), Gaps = 42/487 (8%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF--VIIPLH 599
LI+ L+ L+ IC ++GAILVF+PG +I K + ANP + +I LH
Sbjct: 384 LINYELMTLLISHICESMDEGAILVFMPGLAEITKLYEACGANPTINAATSGGKYLIALH 443
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
S + + +Q VF P RKI+++TNIAET+ITIDDVVYV+DSG+ KE YDP +
Sbjct: 444 STLSTAEQSIVFDHAPDSVRKIVIATNIAETSITIDDVVYVVDSGKCKENGYDPNTRMQL 503
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVK 718
L WVS+ASA+QR GRAGR QAG C+ +Y++ + + +PEI+R+P+E LCLQ++
Sbjct: 504 LLEQWVSRASARQRRGRAGRVQAGRCFRMYTRHVHDTVFAEHTLPEIRRVPLEGLCLQIQ 563
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
L I FL K L+PP ++ A+ L+ +GAL E +T LG+ L L V +
Sbjct: 564 LQRMAGGIAGFLGKALEPPKVESVEAAVASLKRLGALDERECLTPLGQHLATLPVDVRVG 623
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
KML + ++ CLDP LT+A R PF P+ +++ A AK A QSD L +
Sbjct: 624 KMLLYGSMLGCLDPVLTIAAVLSGRSPFVAPL--DKRDEADLAKKLFAE---DQSDHLTI 678
Query: 839 IAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE------ 890
+ A+ W++AK++G+ E F + F+S + + +R Q L ++GF+
Sbjct: 679 LNAYNGWQDAKKQGRSSEFAFTRENFLSWRALEGIADLRNQFTQLLNESGFLGSSSKKKG 738
Query: 891 -----------------DVSSCSHNARVPGIIHAVLMAGLYPMVARLRP---PHKNGRR- 929
D + N+ ++ +VL+AGLYP + ++ P P R
Sbjct: 739 GGRYRGRQRGNVLETDVDWIRANRNSENKRLLKSVLVAGLYPNLIKVDPGSRPDAPPRLS 798
Query: 930 -FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
E K+++HP S+NF+ K +VY E + + VR+CT V P LLL
Sbjct: 799 FLAENGRTEKIQIHPSSINFE---AKKFITKWLVYHERVQ-TTAIFVRDCTAVTPYQLLL 854
Query: 989 LATEIAV 995
+I V
Sbjct: 855 FGGKIEV 861
Score = 216 bits (549), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 146/217 (67%), Gaps = 17/217 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-IW-SKGETCKI 238
I+++R +LP + + + V+ NQV++++GETGCGKTTQ+PQF+L++ IW +G +
Sbjct: 116 ILKQRQRLPAWAKQQELIDAVERNQVLIVAGETGCGKTTQLPQFILDNAIWQGRGAMTNM 175
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISATSVA R++ ERGE IG +GYKIRLE + I+FCT GVLLR L
Sbjct: 176 ICTQPRRISATSVASRVASERGEQIGKTVGYKIRLEGSMSSSTRILFCTTGVLLRRLTED 235
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
+ +S +H+IVDE+HER SDF+L ++RD+LP P L+++LMSAT
Sbjct: 236 PL--------------LSGTSHVIVDEVHERSLDSDFLLVLLRDILPHRPTLKVVLMSAT 281
Query: 359 LDADRFSQYFGGCPVI-QVPGFTYPVKSFYLEDVLSI 394
L+A F YF G + ++PGFTYPV YLED+L +
Sbjct: 282 LNALAFEDYFKGVSAVSKIPGFTYPVNEHYLEDILQV 318
>gi|440891709|gb|ELR45257.1| Putative ATP-dependent RNA helicase DHX30 [Bos grunniens mutus]
Length = 1223
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 250/466 (53%), Gaps = 30/466 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 677 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 735
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 736 PMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 795
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 796 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMP 855
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML- 781
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P + + L
Sbjct: 856 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPPLGQWLA 915
Query: 782 -FFAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
A + CL P L ++C + RDPF S + + RA K + + SD LA +
Sbjct: 916 IVLAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFV 969
Query: 840 AAFECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS 893
A W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 970 RAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCT 1028
Query: 894 ----SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHP 943
C+ + ++ VLMAGLYP + ++R + G+ + LH
Sbjct: 1029 LASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHK 1088
Query: 944 HSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
++N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1089 STINREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1131
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 152/226 (67%), Gaps = 18/226 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
+ +E +LP+ +D I S ++ + VV+I+G+TGCGKTT++PQ LLE + +G C +
Sbjct: 453 VWQEAPQLPVDPHRDTILSAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNV 512
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVS 297
+ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 513 IITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQS 572
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY-PHLRLILMS 356
P+ + VS H++VDE+HERD +DF+L I+ L P LRL+LMS
Sbjct: 573 N-----------PSLEGVS---HVVVDEVHERDVNTDFLLLILLKGLQRLNPALRLVLMS 618
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
AT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 619 ATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 664
>gi|390604353|gb|EIN13744.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 983
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 257/484 (53%), Gaps = 39/484 (8%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPF---FRDTSKFVIIPLHSM 601
LI + + ++DG +LVFLPGWEDI + LL +N F D+SK+ I LHS
Sbjct: 346 LIALTISHVLQQTDDGHVLVFLPGWEDIQAVQRCLLDSSNQLGMRFSDSSKYNIHVLHST 405
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
VP +Q+ +F+ PP G R+IILSTNIAET+ITI DVVYV+D+G++KE+ YDP ++S+L
Sbjct: 406 VPLSEQQVIFEPPPAGIRRIILSTNIAETSITIPDVVYVVDTGKIKEQRYDPERHMSSLV 465
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
S+WV ++ QRAGRAGR ++G + + Q RAA+L +Q E+KR+ + + + +K LD
Sbjct: 466 SAWVGSSNLNQRAGRAGRHRSGEYFGILGQKRAAALSPYQTVEMKRVDLSNVVMHIKALD 525
Query: 722 -PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
PN +++ L T++PP + + A+ LQ +GAL +E +T LG L L V M ++
Sbjct: 526 FPNMAVDEVLAATIEPPAAARVDAAMEDLQRVGALDAEENLTALGRVLLQLPVDAQMGRL 585
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ + CLD ALTLA RDPF +SP K+ AAK S +SD LA +
Sbjct: 586 VLYGCFFRCLDQALTLAALLSNRDPF---VSPMHLKQEAAAKKLSWSPTEFRSDALAALR 642
Query: 841 AFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSH 897
A+ W N +G+ + FCS F+S + M+ ++ QL L G I VS+
Sbjct: 643 AYNAWWNMHGKGEYSAANRFCSDNFLSKPTLLMVQKIKNQLLQSLYHVGVI--GVSAGGD 700
Query: 898 NARVPGIIHAV------------LMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
A G + V L+AGL + A+ + G + + T V +HP S
Sbjct: 701 VAPPRGRDNVVPEELNTNGGSLPLLAGLIAIAAQPNFAVRTGEKSLRTQQDKMVFIHPSS 760
Query: 946 L-NFKLSFKKTDDCP----LMVYDE-------ITRGDGGMHVRNCTVVGPLPLLLL-ATE 992
+ N K D P L + E +T G ++ T + P+ +L A +
Sbjct: 761 VNNRKHEVSAGTDAPVEKQLYAFAEKRQNVSSVTSGPAQKYLVTTTRLDPMTYVLFGAHK 820
Query: 993 IAVA 996
I VA
Sbjct: 821 IVVA 824
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 153/263 (58%), Gaps = 28/263 (10%)
Query: 156 MSKAEIAMKVESLTSR---IEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGE 212
+S+ +A K +L R +D N+ ++ R+ LP+ + + + N+V +
Sbjct: 48 ISERSLAAKSRALKERRAHYLQDKNMEKMRNVRTTLPVYTRSSELLKQIHDNEVTICLAA 107
Query: 213 TGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYK 270
TG GKTTQ+PQ +L+ + KGE C IVCTQPRR++A VA+R++ ERGE +G +GY+
Sbjct: 108 TGSGKTTQIPQLILDDMIDKGEGAKCNIVCTQPRRLAAIGVADRVAKERGETLGRTVGYQ 167
Query: 271 IRLESK-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAK--DDVSALTHIIVDEIH 327
+R E K +H SI FCT G+ L+ R++ A +P DDV THI+VDE+H
Sbjct: 168 VRFEHKLPEEHGSITFCTTGIFLK--------RMQSALFQPGTTLDDV---THILVDEVH 216
Query: 328 ERDRYSDFMLAIIRDMLPSYPH----LRLILMSATLDADRFSQYFG---GCP--VIQVPG 378
ERD +D +L +++ ++ ++++LMSAT+D F QYF G P VI+VPG
Sbjct: 217 ERDVDTDLLLVVLKRLIADRKDRGKPIKVVLMSATIDPTLFQQYFADEDGKPASVIEVPG 276
Query: 379 FTYPVKSFYLEDVLSILKSAESN 401
++PV ++++D + L +S
Sbjct: 277 RSFPVTKYFMDDFVPTLAQKQST 299
>gi|398015383|ref|XP_003860881.1| ATP-dependent DEAD/H RNA helicase, putative [Leishmania donovani]
gi|322499104|emb|CBZ34176.1| ATP-dependent DEAD/H RNA helicase, putative [Leishmania donovani]
Length = 1087
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 260/503 (51%), Gaps = 21/503 (4%)
Query: 506 NQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLV---LIEQLLRKICMDSEDG 562
NQ AQ +E + ++ +QL T + ++ LV L+ L++KI +S
Sbjct: 353 NQKREAQRSADTLETEGNAALYEQLKSVVFDTFDRDVEGLVPYDLVCDLIKKIHDESRSH 412
Query: 563 A--ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
A ILVFLPGW I+ +RL + F R+ S I+ LHS + + +Q++VF+RPP RK
Sbjct: 413 AESILVFLPGWAAISCIANRLKRSQFARELS---ILMLHSSLTTAEQQRVFERPPKNYRK 469
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
I+L+T+IAE +ITI+D+VYVIDSG +K SYDP N S L+++ + KA+ QR GRAGRC
Sbjct: 470 IVLATSIAEISITINDIVYVIDSGLVKGTSYDPMGNTSALKATLIGKANGVQRRGRAGRC 529
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSV 740
Q G+CYHL + LP F PEI R P+EE+CLQ+K ++ N L + + P +
Sbjct: 530 QPGVCYHLLPKAVYDDLPGFLPPEIVRSPLEEVCLQLKAIESNQKCAQVLSRAMSAPPTE 589
Query: 741 TIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACAS 800
I +A+ L D+GA + +EK+T LG L L HPL+ KMLF A LD T+A
Sbjct: 590 AIEHAVQFLTDMGAFTTEEKMTNLGRALAALPTHPLLGKMLFTAACFGVLDTVATIAAGL 649
Query: 801 DYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQ 860
+ PF I P ++ +A + L SD V+ F W + G+ + +
Sbjct: 650 SVKTPF---IRPQAFEKNSAKENLLRIDNNALSDHFCVVTLFTGWIRS---GRSLHYATS 703
Query: 861 YFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP---GIIHAVLMAGLYPMV 917
+F + + L + Q ++++ F VS +H +R G++ VL+ LYP +
Sbjct: 704 HFADNNTLRSLERTKLQFIRLVLQSSFAKGIVSPEAHFSRYASNRGLVRLVLLWSLYPRL 763
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC---PLMVYDEITRGDGGMH 974
A L G + + + S+N L F + D +VY + + +
Sbjct: 764 ATLEYRANRGSQNPQVFCWDN-KAAVFSMNSVLGFYRRRDFGANSFIVYYDRMNLEAMLS 822
Query: 975 VRNCTVVGPLPLLLLATEIAVAP 997
V + T V P+ ++L ++ V P
Sbjct: 823 VFDATAVSPIDVVLCLRQLTVRP 845
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 46/365 (12%)
Query: 60 VVHEVCKKMGMTSKSSGRGKQRRVSVCKS-------KKRVETDKGKEILPSLTFSEGSKL 112
+VH + + KSSG G R + + K K++ + +G + ++ +G++
Sbjct: 1 MVHRIAMSFNLDHKSSGEGASRALKLTKIGGIVDALKRQQDAAEGGVRVKTIDGYQGAQK 60
Query: 113 VLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKA--EIAMKVESLTS 170
+ D + D EKL ++S + + + + +P + + +A S
Sbjct: 61 LKHDHLSE--SDILSLEEKLKPHKSSMAAEIKA----VANEPSLERKCFRVAQGGLSAVP 114
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-I 229
++ + + Q+ + R LP I +V N VV+I G+TGCGKTTQ+PQ L + I
Sbjct: 115 KLSRPVDRAQLNQFRMSLPAYRHGPQIIKSVQENSVVVICGDTGCGKTTQIPQMLYDAGI 174
Query: 230 WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNG 289
+ K ++CTQPRRISA SVA+R++ ERGE GD+ GY IR E+ S I++ T G
Sbjct: 175 FDKHH--DVICTQPRRISALSVAQRVATERGEACGDSCGYVIRFENMTSASSHIIYQTTG 232
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS--- 346
+LLR L S+ D+ + ++VDE+HERD +DF L ++RD L +
Sbjct: 233 ILLRRLHSE--------------PDLKNVACVVVDEVHERDVETDFCLLLLRDRLRAQQE 278
Query: 347 ----YP-HLRLILMSATLDADRFSQYFGG------CPVIQVPGFTYPVKSFYLEDVLSIL 395
YP L+L++MSAT+ D YF G P+I +PG +PV+ F+LED L +
Sbjct: 279 HPEIYPLQLKLVVMSATVQVDALVSYFSGYNRGRDIPLITIPGTLFPVREFFLEDALRKV 338
Query: 396 KSAES 400
++ S
Sbjct: 339 GASAS 343
>gi|302795757|ref|XP_002979641.1| hypothetical protein SELMODRAFT_419303 [Selaginella moellendorffii]
gi|300152401|gb|EFJ19043.1| hypothetical protein SELMODRAFT_419303 [Selaginella moellendorffii]
Length = 1665
Score = 256 bits (653), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 225/395 (56%), Gaps = 17/395 (4%)
Query: 608 KKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSK 667
K +F+ PPPG RKI+L+TN+AET+ITI+DVV+V+D G+ KE SYD NN L +W+SK
Sbjct: 474 KLIFEHPPPGVRKIVLATNMAETSITINDVVFVVDVGKAKETSYDALNNTPCLLPTWISK 533
Query: 668 ASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIE 727
AS++QR GRAGR + G CYHLY + + ++Q+PE+ R P+ LCLQ+K L ++
Sbjct: 534 ASSRQRRGRAGRVKPGECYHLYPKAVHEAFAEYQLPELLRTPLHSLCLQIKSLQLG-DVA 592
Query: 728 DFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
FL K + PP S+ ++NA+ L IGAL +++T+LG L L V P + KML +
Sbjct: 593 MFLSKAMQPPESLAVKNALEYLTTIGALDEQQELTDLGRILALLPVEPRLGKMLIMGSIF 652
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
CLDP LT+A RDPF +P+ +++ A AK++ A SD + ++ AFE W+
Sbjct: 653 RCLDPVLTIAAGLAARDPFIMPM--DKRNLADQAKYDFAGREA--SDHIGLVRAFEGWEA 708
Query: 848 AKQRGQEAWFCSQYFVSSGVMNMLLGM---RKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
A + +C + F+S M LLGM RKQ L G I +D+ + ++ P +
Sbjct: 709 AMSNQVASSYCWKNFLS---MQTLLGMSSLRKQFIGLLTTAGLITDDLGFFNRYSQDPVV 765
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYD 964
+ AV+ +GL+P VA + K+ +T +V L S+N + F + P ++Y
Sbjct: 766 LRAVICSGLFPGVASVMKKQKS--VLYKTIEDGQVLLSASSVNSR-DFNPKN--PWLMYS 820
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAP 999
E + M VR+ T + LLL ++ AP
Sbjct: 821 EKIKMSSVM-VRDSTCISDSTLLLFGGKLIDGHAP 854
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 172/267 (64%), Gaps = 16/267 (5%)
Query: 130 EKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLP 189
+++ A+ SR++ + + + + + + + ++E+ E+ ++++ R LP
Sbjct: 132 KRMSADTSRRALRGPERSASSYEESPTTTMQRSRRLEAKMKEWEESEEGQKMMTIRRNLP 191
Query: 190 ISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCTQPRRIS 247
K + + NQVV+ISGETGCGKTTQ+PQ++LE +G +C I+CTQPRRIS
Sbjct: 192 SFKEKAGLLEVIAKNQVVVISGETGCGKTTQLPQYILEAEIEAGRGGSCNIICTQPRRIS 251
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
A SVAER++ ERGE IG+ IGY++RLE +++ ++FCT G+LLR L++
Sbjct: 252 AVSVAERVASERGEVIGETIGYQVRLEGIRSRNTRLLFCTTGILLRRLLTD--------- 302
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQY 367
P+ + +TH+IVDEIHER DF+L I++++LP P LRL+LMSATL+A+ FS+Y
Sbjct: 303 --PS---LKGVTHVIVDEIHERGMNEDFLLVILKELLPQRPDLRLVLMSATLNAELFSKY 357
Query: 368 FGGCPVIQVPGFTYPVKSFYLEDVLSI 394
F P +PGFTYPVKS +LEDVL +
Sbjct: 358 FSKAPTAHIPGFTYPVKSHFLEDVLDL 384
>gi|449550786|gb|EMD41750.1| hypothetical protein CERSUDRAFT_110326 [Ceriporiopsis subvermispora
B]
Length = 1471
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 224/435 (51%), Gaps = 44/435 (10%)
Query: 547 LIEQLLRKICMDSED-----GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
LI +LL +IC++ AIL+F+PG +I + D L + F +F + PLHS
Sbjct: 921 LIVRLLERICLEDPSYIPYSSAILIFMPGMGEIRRLNDTLTEHATFGAEDRFKVYPLHST 980
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+ + Q VF PPPG RKI+++TNIAET ITI D+ VIDSG+ +E +D +S L
Sbjct: 981 ISTEDQSAVFDIPPPGIRKIVIATNIAETGITIPDITCVIDSGKHREMRFDEKRQISRLV 1040
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEELCLQVKLL 720
++V+K++A QR GRAGR Q+G+C+HL++++R + D PE+ R+ + +L L++K++
Sbjct: 1041 ETYVAKSNAAQRRGRAGRVQSGLCFHLFTKVRHDTKMADHPDPEMMRLSLSDLALRIKIM 1100
Query: 721 DPN--CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
+IED L + LDPP+SV I+ A+ L ++GAL+ E++T +G L L +
Sbjct: 1101 KIKLGSSIEDVLSRALDPPLSVNIQRAVAALAEVGALTTSEEITPMGRLLSKLPTDVHLG 1160
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K L A L CLDPALT+A + + PF P ++ A F + SD L +
Sbjct: 1161 KFLLTATLFRCLDPALTIAATLNSKSPFLSPFGLEQEADRAKASFRI-----DNSDFLTI 1215
Query: 839 IAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---------- 888
AF W+ A G FC F+S + + +R+Q + L+ + FI
Sbjct: 1216 HNAFASWRRACSNGVARKFCKTSFLSHQNLQQIEDLRQQFLSYLVDSSFIHADHTFVREL 1275
Query: 889 ---------------PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVET 933
P D+ + S N II A L AGLYP + + P R
Sbjct: 1276 NRARYARGKTRFVYVPADLDAGSSNV---AIISAALCAGLYPKILTVNPSTSEMRTITNN 1332
Query: 934 AGGAKVRLHPHSLNF 948
+ HP S+NF
Sbjct: 1333 QVAS---FHPSSVNF 1344
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 147/218 (67%), Gaps = 13/218 (5%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
++ +R +LPIS ++ ITS ++++Q++++SGETGCGK+TQVP F+LE SKG C+I C
Sbjct: 635 MLRQREQLPISRYRQEITSILETSQILVLSGETGCGKSTQVPSFILEDQLSKGRNCRIYC 694
Query: 241 TQPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A+R+S E GE +G N +GY +RLES + + + TNG+ LR+
Sbjct: 695 TEPRRISAISLAQRVSRELGEPAGVVGTNNSLVGYSVRLESNITSRTRLAYVTNGIALRM 754
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L + + LTH+I+DE+HER SDF+L +++ +L P LR++L
Sbjct: 755 LEGGTGPGGQGTA-------FDELTHVIIDEVHERSIESDFLLIVLKSLLQERPDLRVVL 807
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
MSAT+DA++ S+YFGG PV+ VPG T+PV YLED +
Sbjct: 808 MSATVDAEKISKYFGGTPVLHVPGRTFPVDVRYLEDAI 845
>gi|145343060|ref|XP_001416284.1| Dhx57-like DEXH-box helicase, probable [Ostreococcus lucimarinus
CCE9901]
gi|144576509|gb|ABO94577.1| Dhx57-like DEXH-box helicase, probable [Ostreococcus lucimarinus
CCE9901]
Length = 1545
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 258/519 (49%), Gaps = 67/519 (12%)
Query: 510 VAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLP 569
V II+ +EN S L+ +A NP+ + L GAIL+F+P
Sbjct: 996 VGAIIQTELENGPS-----ALVPPPIAGTNPKDVGL----------------GAILIFMP 1034
Query: 570 GWEDINKTRDRLLANPFFR--DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
G +I + +L + D I+PL+ + S QK++F+RPP G RKI+++TNI
Sbjct: 1035 GQFEILRLIRKLEQSRLLEADDVGALRILPLYGSLSSKDQKRIFERPPDGVRKIVVATNI 1094
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET++TIDDV YVID+GR KE YD +S L +WVS+A+AKQR GR+GR G +
Sbjct: 1095 AETSVTIDDVRYVIDTGRAKEMQYDTLRGLSVLADTWVSQAAAKQRRGRSGRTAPGARFA 1154
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
++S+ + A++ Q PE+ R P+++LCL +K + + L L PP + I A+
Sbjct: 1155 MFSRAQFANMLPQQPPEMLRTPLQQLCLSIKAMSEQ-PVAQTLGAALTPPDTRAIHAALD 1213
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
L + A DE++T LG L + V + KML F L+ CLDP LT+A A R F
Sbjct: 1214 ELCALRAFDADERLTPLGRHLAQMPVDARIGKMLLFGALLGCLDPILTIAGAMSGRPLF- 1272
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSS 865
SP + + AA SL +SD L ++AA++ W AK RG+ E +C +YF+SS
Sbjct: 1273 --FSPKDNR--DAADKAKRSLSATKSDHLTMVAAYKGWAKAKARGKPFERRYCEEYFLSS 1328
Query: 866 GVMNMLLGMRKQLQTELIKNGFIPEDV-----------SSCSHNARVPGIIHAVLMAGLY 914
+ + R T L GF+ + + N+ +I L+AG Y
Sbjct: 1329 QALEAVHASRLDYATILADLGFVRREYINNMRRFGTGGTEADSNSETARVIKGALVAGFY 1388
Query: 915 PMVARLRPPHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTD 956
P V R++ P ++ +T GA +V LHP S+NF
Sbjct: 1389 PHVVRVKHPET---KYAQTTSGAVAKAANSRELKYYSKDLGRVFLHPASVNFHCG---KF 1442
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+ +VY E +++R+ T+VG LLL +IAV
Sbjct: 1443 ESRWIVYSERVE-TAKVYIRDNTMVGSYSLLLFGGDIAV 1480
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 135/223 (60%), Gaps = 27/223 (12%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVCTQ 242
R LP S ++ +T V+ + VV++SGETGCGK+TQVPQF+LE +G I+ TQ
Sbjct: 638 RLNLPASGSREEVTRAVNKSSVVVLSGETGCGKSTQVPQFILESEIAAGRGGETNIIVTQ 697
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRISA +AER++ ER E GD +GY +RLESK + ++FCT GVLLR L+S +
Sbjct: 698 PRRISAIGLAERVAAERCERCGDVVGYSVRLESKQSSKTRLLFCTTGVLLRRLLSDPL-- 755
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
++ TH+I+DE+HER SD +L ++R ++ P +R++LMSAT DAD
Sbjct: 756 ------------LANTTHVILDEVHERSVDSDLLLLLLRRVIAKNPKIRIVLMSATADAD 803
Query: 363 RFSQYF---------GGCPVIQV--PGFTYPVKSFYLEDVLSI 394
F YF G QV GFT+PV+ ++LEDV +
Sbjct: 804 LFDDYFKHPSAIAAVSGVSTTQVHIAGFTHPVREYFLEDVFEM 846
>gi|323508118|emb|CBQ67989.1| probable DNA/RNA helicase (DEAD/H box family II) [Sporisorium
reilianum SRZ2]
Length = 1699
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 249/466 (53%), Gaps = 49/466 (10%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINK 576
+L + + + +D L +N +I+ LI ++L ++CM+ + A L+F+PG +I K
Sbjct: 1122 SLGKAYRSKTIDT-LGRMNEYVINHDLIIKILERVCMEKDLEAYSAATLIFMPGLAEIRK 1180
Query: 577 TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
D L+ +P F + F + PLHS + S Q VF PPPG RKI+++TNIAET ITI D
Sbjct: 1181 CHDMLVDHPVF-GGAGFQLFPLHSTISSENQGAVFNVPPPGVRKIVIATNIAETGITIPD 1239
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
+ VIDSG+ +E YD +S L +++K++AKQR GRAGR Q GIC+HL+++ R S
Sbjct: 1240 ITCVIDSGKHREMRYDEKRQISRLVECFIAKSNAKQRRGRAGRVQEGICFHLFTKYRHDS 1299
Query: 697 -LPDFQVPEIKRIPIEELCLQVKLLDP--NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIG 753
L + +PE+ R+ +++L L++K++ +IE+ L + LDPP ++ AI L ++
Sbjct: 1300 YLDEHPLPEMLRLSLQDLALKLKIMKIKIGTSIENALSQALDPPSPANVQRAIAALVEVK 1359
Query: 754 ALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPN 813
AL+ E++T LG L + + M K L A L CLDPALT+A A + + PF P
Sbjct: 1360 ALTSTEEITHLGRHLSKMPLDVHMGKFLLVATLFKCLDPALTIAAALNSKSPFMTPFGKE 1419
Query: 814 EKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLG 873
+ F+L G SD L + AF ++ + + FC++ F+S + +
Sbjct: 1420 LEADRAKQSFKL-----GDSDFLTIANAFNGFRRSTAQNHHRTFCNRSFLSIQNLLQIEE 1474
Query: 874 MRKQLQTELIKNGFI-------------------------PEDVSSCSH---NARVPGII 905
+R+Q + LI GF+ P ++ SH N+ +I
Sbjct: 1475 LRQQYFSYLIDAGFVAVDDAFRQELNKLRYRSGGAANFAKPRFMTIPSHLDANSSSLAMI 1534
Query: 906 HAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAK-VRLHPHSLNFK 949
HA L AGLYP + H + + + ++T G + +HP S+NF+
Sbjct: 1535 HATLAAGLYPKLL-----HIDSKTYQLKTIGNHQPTSIHPSSVNFR 1575
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 156/236 (66%), Gaps = 22/236 (9%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
E T+R+ + ++++ R LPI++ + I V++NQ+ ++SGETGCGK+TQVP +
Sbjct: 832 AEYFTNRV-ASPSYQKMLPGRQGLPIANHRQEILDLVENNQIFVLSGETGCGKSTQVPAY 890
Query: 225 LLEHIWSKGETCKIVCTQPRRISATSVAERISVERGE---NIGDN---IGYKIRLESKGG 278
+LEH S+G CKI T+PRRISA S+AER+S E GE ++G N +GY IRLES G
Sbjct: 891 ILEHCMSQGRHCKIYVTEPRRISAISLAERVSEELGEPRKSVGSNDSLVGYAIRLESNVG 950
Query: 279 KHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLA 338
K++ +V+ T G++LR+L +G + + +TH+I+DE+HER SDF+L
Sbjct: 951 KNARLVYATTGIVLRML--EGTA-------------FNEITHVIIDEVHERSIESDFLLI 995
Query: 339 IIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
I++ ++ L++ILMSAT+DA+R S+Y GGCP I VPG T+PV YLED + +
Sbjct: 996 ILKTLIAHRKDLKVILMSATVDAERISKYCGGCPTIAVPGRTFPVNVHYLEDAVEM 1051
>gi|326671005|ref|XP_697933.5| PREDICTED: ATP-dependent RNA helicase Dhx29 [Danio rerio]
Length = 1365
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 257/489 (52%), Gaps = 44/489 (8%)
Query: 535 LATVNPELIDLVLIEQLLRKI----CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L +NP I++ LI LL + ++ DGA+LVFLPG I + D L + F
Sbjct: 827 LQYMNPNKINMDLILDLLAYLDKSPQFNAVDGAVLVFLPGLAHIQQLHDLLSTDKRFSSK 886
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++ ++ LHS + S Q F PP G RKI+LSTNIAET +TI DVV+VID+GR KE
Sbjct: 887 DRYKLVALHSSLSSQDQSSAFTVPPAGVRKIVLSTNIAETGVTIPDVVFVIDTGRTKENR 946
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
Y + +S+L +VSKASA QR GRAGR + G C+ LY + R S D+ +PEI R+P+
Sbjct: 947 YHESSQMSSLVEMFVSKASALQRQGRAGRVREGFCFRLYPKFRFESFIDYSIPEILRVPL 1006
Query: 711 EELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD-EKVTELGE 766
EELCL + C EDFL ++LD P + NA+ +L+ IGA D +T LG
Sbjct: 1007 EELCLHIM----KCEYGSPEDFLSRSLDAPQQQAVCNAVSLLRRIGACQQDTHTLTPLGH 1062
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L V+ + KML F + CL+P T+A A + PF P+S K+ A AK LA
Sbjct: 1063 HLAALPVNVKIGKMLIFGAIFGCLEPIATIAAAMSEKSPFATPMS--RKEEANLAKSALA 1120
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIK 884
SD + + A+ W++++ G A +C ++F++ + + ++++L + +
Sbjct: 1121 V---ANSDHMTIYKAYLGWRSSRTEGTRAEMNYCRRHFLNRTALITIEEVKQELMRMVEQ 1177
Query: 885 NGFIPEDVSSC-----SHNARVP--------GIIHAVLMAGLYPMVAR-LRPPHKNGRR- 929
GF+ + S + P ++ A L AGLY V R L P + +
Sbjct: 1178 AGFVSSKLGRTPRPRPSTETKAPLSISTQDVCVVKATLTAGLYDNVGRILYSPSLDVQER 1237
Query: 930 ---FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPL 986
VETA G K +HP S+N F +T M++ E + + +++ T++ PL +
Sbjct: 1238 VVCVVETAQG-KAHVHPSSVN---RFLQTHG--WMLFQEKVKY-SKVFLKDTTLISPLSM 1290
Query: 987 LLLATEIAV 995
LL +I V
Sbjct: 1291 LLFGGDIDV 1299
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 150/222 (67%), Gaps = 22/222 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET--- 235
R++++ER +LP+ ++ + + ++V++I+GETG GK+TQ+PQF+LE + + G+T
Sbjct: 553 RRLLDERKQLPVFQHREQVLEALRHHRVLVIAGETGSGKSTQIPQFILEELLAAGDTAQP 612
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGKHSSIVFCTNGV 290
C +V TQPRRISA S+A R+S E G G GY+IR+E++ + + +++CT GV
Sbjct: 613 CSVVVTQPRRISAMSLACRVSQELGSEDGPGSMNSLCGYQIRMENRSSEATRLLYCTTGV 672
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
LLR +L++ + +++LTHIIVDE+HER SDF+L I+++++ L
Sbjct: 673 LLR--------KLQQDRH------LNSLTHIIVDEVHERSVQSDFLLTILKEVVHKRADL 718
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
RLILMSAT+D +F+ YF CPV+ +PG T+PV+ F+LED++
Sbjct: 719 RLILMSATVDCQKFANYFNRCPVVSIPGRTFPVEVFHLEDIV 760
>gi|351709646|gb|EHB12565.1| Putative ATP-dependent RNA helicase DHX30, partial [Heterocephalus
glaber]
Length = 1150
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 250/467 (53%), Gaps = 35/467 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I + G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 609 LDLDLVMDLILHIDAHGDPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 667
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 668 PMMDQKAIFQQPPAGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 727
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 728 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMP 787
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 788 EKTAVEFLSKAVDTPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 847
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 848 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 901
Query: 842 FECWKNAKQRGQEAWFCSQYFVSSGVMNML-----LGMRKQLQTELIKNGFI---PEDVS 893
W+ R Q+ Y N+L G+ KQ +E I F+ P D +
Sbjct: 902 VAGWEEV-LRWQDRTSRENYLEE----NLLPTCPSPGLIKQF-SENIYEAFLVGKPSDCT 955
Query: 894 ----SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHP 943
C+ + ++ VLMAGLYP + ++R + G+ + LH
Sbjct: 956 LPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHK 1015
Query: 944 HSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
++N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1016 STINREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1059
Score = 209 bits (533), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 152/223 (68%), Gaps = 17/223 (7%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
+E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE + +G C ++
Sbjct: 388 QEVPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGAHCNVII 447
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVSQG 299
TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 448 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN- 506
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P+ + VS H+IVDE+HERD +DF+L +++ + P LRL+LMSAT
Sbjct: 507 ----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLNPTLRLVLMSATG 553
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 554 DNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 596
>gi|146086807|ref|XP_001465650.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania infantum
JPCM5]
gi|134069749|emb|CAM68075.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania infantum
JPCM5]
Length = 1087
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 253/485 (52%), Gaps = 19/485 (3%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGA--ILVFLPGWEDINKTR 578
AL + +K + D + V L+ L+ L++KI +S A ILVFLPGW I+
Sbjct: 372 ALYEQLKSVVFDTFDRDVEG-LVPYDLVCDLIKKIHDESRSHAESILVFLPGWAAISCIA 430
Query: 579 DRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
+RL + F R+ S I+ LHS + + +Q++VF+RPP RKI+L+T+IAET+ITI+D+V
Sbjct: 431 NRLKRSQFARELS---ILMLHSSLTTAEQQRVFERPPKNYRKIVLATSIAETSITINDIV 487
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLP 698
YVIDSG +K SYDP N S L+++ + KA+ QR GRAGRCQ G+CYHL + LP
Sbjct: 488 YVIDSGLVKGTSYDPMGNTSALKATLIGKANGVQRRGRAGRCQPGVCYHLLPKAVYDDLP 547
Query: 699 DFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
F PEI R P+EE+CLQ+K ++ N L + + P + I +A+ L ++GA + +
Sbjct: 548 GFLPPEIVRSPLEEVCLQLKAIESNQKCAQVLSRAMSAPPTEAIEHAVQFLTEMGAFTTE 607
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
EK+ LG L L HPL+ KMLF A LD T+A + PF I P ++
Sbjct: 608 EKMANLGRALAALPTHPLLGKMLFTAACFGVLDTVATIAAGLSVKTPF---IRPQAFEKN 664
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
+A + L SD V+ F W + G+ + + +F + + L + Q
Sbjct: 665 SAKENLLRIDNNALSDHFCVVTLFTGWIRS---GRSLHYATSHFADNNTLRSLERTKLQF 721
Query: 879 QTELIKNGFIPEDVSSCSHNARVP---GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG 935
++++ F VS +H +R G++ VL+ LYP +A L G + +
Sbjct: 722 IRLVLQSSFAKGIVSPEAHFSRYASNRGLVRLVLLWSLYPRLATLEYRANRGSQNPQVFC 781
Query: 936 GAKVRLHPHSLNFKLSFKKTDDC---PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
+ S+N L F + D +VY + + + V + T V P+ ++L +
Sbjct: 782 WDN-KAAVFSMNSVLGFYRRRDFGANSFIVYYDRMNLEAMLSVFDATAVSPIDVVLCLRQ 840
Query: 993 IAVAP 997
+ V P
Sbjct: 841 LTVRP 845
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 46/365 (12%)
Query: 60 VVHEVCKKMGMTSKSSGRGKQRRVSVCKS-------KKRVETDKGKEILPSLTFSEGSKL 112
+VH + + KSSG G R + + K K++ + +G + ++ +G++
Sbjct: 1 MVHRIAMSFNLDHKSSGEGASRALKLTKIGGIVDALKRQQDAAEGGVRVKTIDGYQGAQK 60
Query: 113 VLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKA--EIAMKVESLTS 170
+ D + D EKL ++S + + + + +P + + +A S
Sbjct: 61 LKHDHLSE--SDILSLEEKLKPHKSSMAAEIKA----VANEPSLERKCFRVAQGGLSAVP 114
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-I 229
++ + + Q+ + R LP I +V N VV+I G+TGCGKTTQ+PQ L + I
Sbjct: 115 KLSRPVDRAQLNQFRMSLPAYRHGPQIIKSVQENSVVVICGDTGCGKTTQIPQMLYDAGI 174
Query: 230 WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNG 289
+ K ++CTQPRRISA SVA+R++ ERGE GD+ GY IR E+ S I++ T G
Sbjct: 175 FDKHH--DVICTQPRRISALSVAQRVATERGEACGDSCGYVIRFENMTSASSHIIYQTTG 232
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS--- 346
+LLR L S+ D+ + ++VDE+HERD +DF L ++RD L +
Sbjct: 233 ILLRRLHSE--------------PDLKNVACVVVDEVHERDVETDFCLLLLRDRLRAQQE 278
Query: 347 ----YP-HLRLILMSATLDADRFSQYFGG------CPVIQVPGFTYPVKSFYLEDVLSIL 395
YP L+L++MSAT+ D YF G P+I +PG +PV+ F+LED L +
Sbjct: 279 HPEIYPLQLKLVVMSATVQVDALVSYFSGYNRGRDIPLITIPGTLFPVREFFLEDALRKV 338
Query: 396 KSAES 400
++ S
Sbjct: 339 GASAS 343
>gi|389601273|ref|XP_003723173.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504972|emb|CBZ14709.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1083
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 246/468 (52%), Gaps = 26/468 (5%)
Query: 542 LIDLVLIEQLLRKICMDSEDGA--ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH 599
L+ L+ L++KI +S A ILVFLPGW I+ RL + F R+ S I+ LH
Sbjct: 392 LVPYDLVCDLIKKIHDESHSRAESILVFLPGWGAISSIASRLRRSHFARELS---ILLLH 448
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
S + + +Q++VF+RPP RK++L+T+IAET+ITIDD+VYVIDSG +K SYDP N S
Sbjct: 449 STLTTAEQQRVFERPPKHYRKVVLATSIAETSITIDDIVYVIDSGLVKGSSYDPMGNTSA 508
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L+++ + KA+ QR GRAGRCQ G+CYHL + LPDF PEI R P+EE+CLQ+K
Sbjct: 509 LKATLIGKANGVQRRGRAGRCQPGVCYHLLPKAVYDDLPDFLPPEIVRSPLEEVCLQLKA 568
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
++ + N + L + + P + I +A+ L D+GA + +EK+T LG L L HPL+ K
Sbjct: 569 IESSQNCAEVLTRAMSAPSTEAIEHAVHFLTDMGAFTAEEKMTNLGRALAELPTHPLLGK 628
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
MLF A LD T+A + PF I P ++ A + L SD V+
Sbjct: 629 MLFTAACFGVLDTIATIAAGLSVKTPF---IRPQAFEKNAARENLLRIDNNVLSDHFCVV 685
Query: 840 AAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF---IPEDVSSCS 896
F W + G+ + + + +F + + L ++Q ++ + F I + S
Sbjct: 686 TLFTGWIRS---GRSSQYAASHFADNSTLRSLERTKQQFIRLVLHSSFAKGIASPETYLS 742
Query: 897 HNARVPGIIHAVLMAGLYPMVA----RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSF 952
A G++ VL+ LYP +A R +N + F A S N L+F
Sbjct: 743 RYASNKGLVRLVLLWSLYPRIATIEYRANRDKQNPQVFCWDNKAAVF-----STNSVLAF 797
Query: 953 -KKTDDCP--LMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAP 997
K+ D C + Y + + + + + T V P+ + L ++ V P
Sbjct: 798 YKRKDFCANSFIAYYDRMNLEAMLSIFDATAVSPIDVALCLRQLTVRP 845
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 182/355 (51%), Gaps = 42/355 (11%)
Query: 60 VVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDK----GKEILPSLTFSEGSKLVLQ 115
+VH + + KSSG G R + + K ++ + EI L +G + Q
Sbjct: 1 MVHRIAMSFNLDHKSSGEGTNRVLKLTKISATIDALRRQQDAAEIGVRLKTIDGYQGAQQ 60
Query: 116 DLFTHYPPDDG-EPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTS--RI 172
H D E+L ++S + + + ++ ++ ++ L + R+
Sbjct: 61 LEHDHLSGSDILSLAERLKLHKSTMTAEIKVAANEL----ATTRRPFRVRQGGLAAAPRL 116
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH-IWS 231
+ NL QI + R LP + I V N V+++ G+TGCGKTTQ+PQ L + I+
Sbjct: 117 SRPINLAQINQFRMSLPAYRYGPQIIRAVQENSVIVVCGDTGCGKTTQIPQLLYDAGIFD 176
Query: 232 KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVL 291
K ++CTQPRRISA SVA+R+++ERGE G++ GY IR E+ +S I++ T G+L
Sbjct: 177 KHH--DVICTQPRRISALSVAQRVAMERGEACGNSCGYVIRFENMTSANSRIIYQTTGIL 234
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS----- 346
LR L S+ ++ + ++VDE+HERD +DF L ++RD L +
Sbjct: 235 LRRLHSE--------------PELQGVACVVVDEVHERDVETDFCLLLLRDRLRAQKEHP 280
Query: 347 --YP-HLRLILMSATLDADRFSQYFGG------CPVIQVPGFTYPVKSFYLEDVL 392
YP L++++MSAT+ D YF G P+I +PG +PV+ F+LEDVL
Sbjct: 281 DRYPVQLKVVVMSATVQIDALVSYFSGYNSDRDIPLITIPGSLFPVREFFLEDVL 335
>gi|384250322|gb|EIE23802.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 835
Score = 253 bits (647), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 262/492 (53%), Gaps = 39/492 (7%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICM----DSEDGAILVFLPGWEDINKTRDRLLANPFFR 588
+ L+ V+ LI+ L+E L+ + DS AIL+FLPG +I+K L + R
Sbjct: 289 RSLSNVDEALINYELLESLVAHVVSSQQPDSAANAILIFLPGAPEISKLVRALQGSSKLR 348
Query: 589 DTS---KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
+ + I+PLH +P+ QQ +VF++ PG RKI+++TN+AET+ITIDDVV VID GR
Sbjct: 349 SGASGQELRILPLHGSLPAKQQSRVFQKVGPGTRKIVVATNVAETSITIDDVVCVIDCGR 408
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEI 705
+KE YD ++S LQ W S AS +QR GRAGR + G C+ L+S+ +AA+ Q+PE+
Sbjct: 409 VKEIRYDAERSISRLQEMWASAASGQQRRGRAGRVRPGTCFRLFSRKQAAAFQAQQLPEV 468
Query: 706 KRIPIEELCLQVKLLDPNCN-IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E LCL VK P+ + ++ L + + PP I +A+ L +GAL DE +T L
Sbjct: 469 LRMPLESLCLSVKAALPSAHRLQYALGRLISPPALDAIASAVSALTTLGALDDDEALTAL 528
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDP-FTLPISPNEKKRATAAKF 823
G L + + ++K L +A+++ C+ P LT+ A + P F P P+ ++ A AK
Sbjct: 529 GRHLTLMPMDARLAKTLIYAVMLRCVGPVLTVVAAMAHGRPVFQSP--PDRREEAELAKK 586
Query: 824 ELAS-LYGGQSDQLAVIAAFECWKNAKQR-GQEAWF--CSQYFVSSGVMNMLLGMRKQLQ 879
L +SD LA++AAF W A+ + G++A + SQ FVS M L R +
Sbjct: 587 RLTGDSAAARSDHLALVAAFSEWNRARTKDGRQAAYQWASQNFVSDAAMEGTLQGRAEYA 646
Query: 880 TELIKNGFIP-----------EDVSS----CSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
L GF+P D+ S CS NARV I A + AG YP + R+ P
Sbjct: 647 GILADLGFLPVSYVASCRNSAHDLDSHYDECSLNARV---IKAAICAGFYPNILRVDHPP 703
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFKL-SFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGP 983
G +V +HP S+NF SF ++Y ++T + VR ++V
Sbjct: 704 AVTVIATPLFGAGRVFIHPASVNFSCGSFPSG----WLLYTDVTE-TSKVFVREASMVPV 758
Query: 984 LPLLLLATEIAV 995
LLL + V
Sbjct: 759 YALLLFGGALTV 770
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 141/231 (61%), Gaps = 26/231 (11%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
+ + ++ + R KLP + + + + +VV++SG TGCGK+TQ+PQ++LE +G
Sbjct: 11 RGSRMQAMRAAREKLPAHTKRAQLLEALKRQRVVIVSGATGCGKSTQLPQYVLEQAIEEG 70
Query: 234 --ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVL 291
C IV TQPRRISA VA R++ ERGE IGD +GY +RL+S+ + + ++FCT GVL
Sbjct: 71 CGGGCNIVVTQPRRISAVGVASRVAAERGEGIGDVVGYSVRLDSRTSRRTRLLFCTTGVL 130
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS--YPH 349
LR L+ ++ TH++VDE+HER SD +L ++RD+L S P
Sbjct: 131 LRRLLGD--------------SSLAGTTHVVVDEVHERSADSDLLLLLLRDLLASGCNPQ 176
Query: 350 LRLILMSATLDADRFSQYF--------GGCPVIQVPGFTYPVKSFYLEDVL 392
LR++LMSAT +A F YF C ++ +PGFT+PV+ F+LEDVL
Sbjct: 177 LRVVLMSATAEAGLFQSYFDAELAKGSSACALVSIPGFTHPVQDFFLEDVL 227
>gi|71004110|ref|XP_756721.1| hypothetical protein UM00574.1 [Ustilago maydis 521]
gi|46095990|gb|EAK81223.1| hypothetical protein UM00574.1 [Ustilago maydis 521]
Length = 1684
Score = 253 bits (645), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 247/467 (52%), Gaps = 49/467 (10%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINK 576
+L + + + +D L +N +I+ LI ++L ++C++ + A L+F+PG +I K
Sbjct: 1107 SLGKAYRSKTIDT-LGRMNEYVINHDLIIKILERVCLEKDLEPYSAATLIFMPGLAEIRK 1165
Query: 577 TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
D L +P F S F + PLHS + S Q VF PPPG RKI+++TNIAET ITI D
Sbjct: 1166 CHDMLADHPTF-GGSGFQLFPLHSTISSENQGAVFHVPPPGVRKIVIATNIAETGITIPD 1224
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
+ VIDSG+ +E YD +S L ++++++AKQR GRAGR Q GIC+HL+++ R S
Sbjct: 1225 ITCVIDSGKHREMRYDEKRQISRLVECFIARSNAKQRRGRAGRVQEGICFHLFTKYRHDS 1284
Query: 697 -LPDFQVPEIKRIPIEELCLQVKLLDPNC--NIEDFLQKTLDPPVSVTIRNAIIVLQDIG 753
L + +PE+ R+ +++L L++K++ +IE+ L + LDPP ++ AI L ++
Sbjct: 1285 YLDEHPLPEMLRLSLQDLALKLKIMKIKIGHSIENALSQALDPPSPANVQRAIAALVEVK 1344
Query: 754 ALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPN 813
AL+ E++T LG L + + M K L A L CLDPALT+A A + + PF P
Sbjct: 1345 ALTTTEEITHLGRHLSKMPLDVHMGKFLLVATLFKCLDPALTIAAALNSKSPFVTPFGKE 1404
Query: 814 EKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLG 873
+ F+L G SD L + AF ++ + + FC++ F+S + +
Sbjct: 1405 LEADRVKQSFKL-----GDSDFLTIANAFNGFRRSTAQNHHRTFCNRSFLSIQNLMQIEE 1459
Query: 874 MRKQLQTELIKNGFIPED------------VSSCSHNARVP----------------GII 905
+R+Q + L+ GF+ D S S N P +I
Sbjct: 1460 LRQQYFSYLVDAGFVTVDDAFRQELNKLRYRSGGSSNFSKPRFMTIPAHLDVNSSSLAMI 1519
Query: 906 HAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAK-VRLHPHSLNFKL 950
HA L AGLYP + H + + + ++T G + +HP S+NFK+
Sbjct: 1520 HATLAAGLYPKLL-----HIDSKTYQLKTIGNNQPTSIHPSSVNFKV 1561
Score = 213 bits (541), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 169/266 (63%), Gaps = 22/266 (8%)
Query: 135 NQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFK 194
N +++T+ + C P+ S+A E T+R+ + ++++ R LPI++ +
Sbjct: 787 NAPAATEQTKLGELSAACAPQPSEARSKEIAEYFTNRV-ASPSYQKMLPGRQNLPIANHR 845
Query: 195 DVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAER 254
I +++NQ+ ++SGETGCGK+TQVP +++EH S+G CKI T+PRRISA S+AER
Sbjct: 846 QEILDLIENNQIFVLSGETGCGKSTQVPAYIVEHCMSQGRNCKIYVTEPRRISAISLAER 905
Query: 255 ISVERGE---NIGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
+S E GE ++G N +GY IRLES GK++ +V+ T G++LR+L +G +
Sbjct: 906 VSEELGEPRKSVGSNDSLVGYAIRLESNVGKNARLVYATTGIVLRML--EGTA------- 956
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF 368
+ +TH+I+DE+HER SDF+L I++ ++ L++ILMSAT+DA+R S+Y
Sbjct: 957 ------FNEITHVIIDEVHERSIESDFLLIILKTLIAHRKDLKVILMSATVDAERISKYC 1010
Query: 369 GGCPVIQVPGFTYPVKSFYLEDVLSI 394
GGCP I VPG T+PV YLED + +
Sbjct: 1011 GGCPTITVPGRTFPVNVHYLEDAVEM 1036
>gi|195485815|ref|XP_002091244.1| GE13544 [Drosophila yakuba]
gi|194177345|gb|EDW90956.1| GE13544 [Drosophila yakuba]
Length = 939
Score = 253 bits (645), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 277/522 (53%), Gaps = 45/522 (8%)
Query: 491 KAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQ 550
K +D RT L E+ + E +I+ ++ + +S ++L+K + D+ I
Sbjct: 352 KTRDRRTKRDLPERRMKHEA--MIEPYLRR-IRNSYDSRVLEKLRLPESEGCEDIDFIAD 408
Query: 551 LLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP------FFRDTSKFVIIPLHSMVPS 604
L+ IC + +GAILVFLPG++ I++ + +L P +RD + PLHS++ S
Sbjct: 409 LVYYICENEPEGAILVFLPGYDKISQLFN-ILDKPKTPKGQRWRD--HMAVFPLHSLMQS 465
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+Q+ VF+RPP G RK+I+ST IAET++TIDDVVYVI+SGR K +YD N+ +L W
Sbjct: 466 GEQQAVFRRPPTGKRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVW 525
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
V+KA+ +QR GRAGR + GICY+L+++ R + D PEI R +E + L +KLL
Sbjct: 526 VTKANTQQRKGRAGRVRPGICYNLFTRAREDRMADIPTPEILRSKLESIILSLKLL---- 581
Query: 725 NIED---FLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
+I+D FLQ ++ P I+ + +L+ I AL +T LG L L + P M KM+
Sbjct: 582 HIDDPYRFLQTLINAPNPEAIKIGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMI 641
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISP----NEKKRATAAKFELASLYGGQSDQLA 837
+ L CLDP + A A ++ PF P+ +E KR A +SD L
Sbjct: 642 LMSALFCCLDPISSAAAALSFKSPFYSPLGKESQVDEIKRRMARNM--------RSDHLL 693
Query: 838 VIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP----EDVS 893
V +++++ E FC + F+SS + L M+ Q L F+ +D +
Sbjct: 694 VHNTINAYRDSRYSHTERDFCYKNFLSSVTLQQLERMKNQFSELLYNYKFLASSNCKDTA 753
Query: 894 SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGRRFVETAG---GAKVRLHPHSLNF 948
S ++ ++P ++ A++ AGLYP +A LR KN R + T G +V HP S+N
Sbjct: 754 SNKNSEKIP-LLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVN- 811
Query: 949 KLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
S + D VY + + +++ + T+V P+ L++
Sbjct: 812 --SGESGFDSAYFVYFQRQKS-TDLYLLDSTMVFPMALIIFG 850
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 161/256 (62%), Gaps = 23/256 (8%)
Query: 142 KTRGKRVDIFC-KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITST 200
+T+ + D+ C PK+ + +++E ++E+ N R+ + R KLP + D I
Sbjct: 108 ETKERNADLDCVNPKLDER---LQLELEQRQLEE--NGRKRLAARKKLPTMKYADEIVQA 162
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVE 258
V NQV+LI G TGCGKTTQVPQ LL+ S+G +C+IVCTQPRRISA ++AE +S E
Sbjct: 163 VCENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIVCTQPRRISAITIAEWVSYE 222
Query: 259 RGENIGDNIGYKIRLES-KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA 317
R E++G+++GY+IRLES K + +SI +CT GVLL+ L S P ++S
Sbjct: 223 RCESLGNSVGYQIRLESRKPRERASITYCTTGVLLQQLQSD-----------PLMHNLSV 271
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVP 377
L I+DEIHER +D ++ +++ +LP P L++ILMSAT+ F YF CP+ ++
Sbjct: 272 L---ILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNHCPMFRIE 328
Query: 378 GFTYPVKSFYLEDVLS 393
G +PV+ YLEDVLS
Sbjct: 329 GVMFPVQMLYLEDVLS 344
>gi|390352196|ref|XP_792246.3| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Strongylocentrotus purpuratus]
Length = 577
Score = 253 bits (645), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 263/490 (53%), Gaps = 92/490 (18%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDR 580
A+ ++ +Q++D L++++ ++DL L +LLR I + +GAILVFL GW+ I+K D+
Sbjct: 17 AMRETYSEQVVDT-LSSMDHNVLDLDLTAELLRYISLQKPEGAILVFLQGWDQISKLHDK 75
Query: 581 LLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYV 640
L + F + +F+IIPLHSM+P++ Q+ VF+ PPPG RKII++TNIAET+ITIDDVVYV
Sbjct: 76 LTSQTLFSE-ERFIIIPLHSMMPTINQRHVFEHPPPGVRKIIIATNIAETSITIDDVVYV 134
Query: 641 IDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDF 700
++ GR+KE ++D NN+ T+++ WVSKASA QR GRAGR Q G C+H+YSQL+A+ + ++
Sbjct: 135 VNLGRVKETNFDVANNIRTMKAEWVSKASAHQRRGRAGRVQDGECFHVYSQLKASEMVEY 194
Query: 701 QVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK 760
Q+PEIKR P+EELCL +K L ++ F+ K ++ P I+ AI L+ +G EK
Sbjct: 195 QLPEIKRTPLEELCLNIKTLKLG-SVHPFISKAMETPDIRAIQLAISSLKQMGK----EK 249
Query: 761 VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATA 820
+ + E+ LS + L LA A
Sbjct: 250 LAD--ERRRVLS--------------NNTRSDHLMLANA--------------------M 273
Query: 821 AKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQT 880
+ +E A + G+ CW+N F+SS +++ML M+ Q
Sbjct: 274 SGWEDAKEHRGEGSY--------CWQN--------------FMSSNILSMLSKMKGQFCD 311
Query: 881 ELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARL------------RPPH 924
L + F+ P+ + + + N+ ++ AVL AGLYP VA + RPP
Sbjct: 312 VLHRLRFVSDRSPKHIDA-NRNSENEQLVKAVLCAGLYPKVAHIDKVPFNRKTGQNRPPR 370
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPL 984
+ T +V++H S+N + + T ++Y + + + + T+V P
Sbjct: 371 ------LSTPEDGRVQIHLKSVN---ANETTFSSKWLLY-HLKLKSTSVFLHDTTMVEPY 420
Query: 985 PLLLLATEIA 994
PL+ +I+
Sbjct: 421 PLIFCGGKIS 430
>gi|402219844|gb|EJT99916.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 1501
Score = 252 bits (644), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 231/445 (51%), Gaps = 41/445 (9%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE-----DGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
++ +I LI +LL +IC + + A+LVF+ G +I + D L +P F
Sbjct: 954 LDERMIPYDLIIRLLERICFEDDAYLPFSNAVLVFMSGLNEIRRLNDMLNEHPLFSIEQA 1013
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
F I PLHS++ S Q VF P PG RKI++STNIAET ITI D+ VIDSGR +E +D
Sbjct: 1014 FRIHPLHSLISSEGQLVVFDVPSPGVRKIVISTNIAETGITIPDITCVIDSGRHREMRFD 1073
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPDFQVPEIKRIPIE 711
+S L ++K++AKQR GRAGR QAG+C+HL+++LR + + +PE+ R+ +
Sbjct: 1074 EKRQISKLVECHIAKSNAKQRRGRAGRVQAGLCFHLFTKLRFETQMAEHPLPEMMRLSLS 1133
Query: 712 ELCLQVKLL--DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+L L++K+L D +I+D L + LDPP V I+ A+ L ++ AL+ E +T +G L
Sbjct: 1134 DLALRIKILKVDLGTSIQDVLSRALDPPSPVNIQRAVSALVEVKALTPSEDITPMGRLLS 1193
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + K L A+L CLDPALT+A + + PF P A A K +L S
Sbjct: 1194 KLPTDVHLGKFLLTAVLFRCLDPALTIAAGLNLKSPFITPFG----HEAEADKAKL-SFK 1248
Query: 830 GGQSDQLAVIAAFECWKNAKQR--GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
G SD L + F W+ G FC + ++S + + +R+Q + L+ + F
Sbjct: 1249 IGNSDFLTLHNVFSSWRKVCNNPGGSVRTFCRKNYLSYPNLQQIEELRQQFLSYLVDSSF 1308
Query: 888 IPEDVSS-----------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
I D + C N+ IIHA L AGLYP + + P +
Sbjct: 1309 IQVDQAYERELSRARYHRSGKVRFVAVPTVCDENSNNFDIIHAALAAGLYPKLLSIDPNN 1368
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFK 949
+ R GA +HP S+NF+
Sbjct: 1369 GSLRTL---GNGAPTSIHPTSVNFR 1390
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 146/216 (67%), Gaps = 13/216 (6%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R+ LPI+ ++ VIT T++ ++++SGETGCGK+TQVP F+LE + G+ CKI+ T+PR
Sbjct: 676 RNMLPIAPYRTVITETLEQAGILVLSGETGCGKSTQVPSFILEEHLAAGKHCKILVTEPR 735
Query: 245 RISATSVAERISVERGE------NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E G+ + +GY IRLES K++ + F TNG+ LR+L
Sbjct: 736 RISAISLAQRVSNELGDPPGTLGTLASLVGYSIRLESNTTKNTRLTFATNGIALRMLEGG 795
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
A DD+ THI+VDE+HER SDF+L +I+ +L +++++LMSAT
Sbjct: 796 SGH----GGRGTAFDDI---THIVVDEVHERSIESDFLLIVIKSLLEQGRNIKVVLMSAT 848
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
LDA++ SQ+FGGCP+I VPG T+PV+ +LED + +
Sbjct: 849 LDAEKISQFFGGCPMISVPGRTFPVEVGFLEDAVEL 884
>gi|24585491|ref|NP_610056.1| CG9323, isoform A [Drosophila melanogaster]
gi|442628640|ref|NP_001260639.1| CG9323, isoform B [Drosophila melanogaster]
gi|20177015|gb|AAM12269.1| GH12763p [Drosophila melanogaster]
gi|22946936|gb|AAF53921.2| CG9323, isoform A [Drosophila melanogaster]
gi|220947090|gb|ACL86088.1| CG9323-PA [synthetic construct]
gi|220956666|gb|ACL90876.1| CG9323-PA [synthetic construct]
gi|440214005|gb|AGB93174.1| CG9323, isoform B [Drosophila melanogaster]
Length = 942
Score = 252 bits (644), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 262/488 (53%), Gaps = 36/488 (7%)
Query: 522 LSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL 581
+ +S ++LDK + D+ I L+ IC + +GAILVFLPG++ I++ + +
Sbjct: 383 IRNSYDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYN-I 441
Query: 582 LANPFFRDTSK-------FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITI 634
L P TSK + PLHS++ S +Q+ VF+RPP G RK+I+ST IAET++TI
Sbjct: 442 LDKP---KTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTI 498
Query: 635 DDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA 694
DDVVYVI+SGR K +YD N+ +L WV+KA+ +QR GRAGR + GICY+L+S+ R
Sbjct: 499 DDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSRARE 558
Query: 695 ASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED---FLQKTLDPPVSVTIRNAIIVLQD 751
+ D PEI R +E + L +KLL +I+D FLQ ++ P I+ + +L+
Sbjct: 559 DRMDDIPTPEILRSKLESIILSLKLL----HIDDPYRFLQTLINAPNPEAIKMGVELLKR 614
Query: 752 IGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPIS 811
I AL +T LG L L + P M KM+ + L CLDP + A A ++ PF P+
Sbjct: 615 IEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLG 674
Query: 812 PNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNML 871
++ R K +A +SD L V +++++ E FC + F+SS + L
Sbjct: 675 --KESRVDEIKRRMAR--NMRSDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQL 730
Query: 872 LGMRKQLQTELIKNGFIP----EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--K 925
M+ Q L F+ +D +S ++ ++P ++ A++ AGLYP +A LR K
Sbjct: 731 ERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIP-LLRAIIGAGLYPNMAHLRKSRQIK 789
Query: 926 NGRRFVETAG---GAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVG 982
N R + T G +V HP S+N S + D VY + + + + + T+V
Sbjct: 790 NRVRAIHTMATDDGRRVNFHPSSVN---SGESGFDSAYFVYFQRQKS-TDLFLLDSTMVF 845
Query: 983 PLPLLLLA 990
P+ L++
Sbjct: 846 PMALIIFG 853
Score = 199 bits (506), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 162/256 (63%), Gaps = 23/256 (8%)
Query: 142 KTRGKRVDI-FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITST 200
+T+ + D+ + PK+ + +++E ++E++A R +E R KLP + D I
Sbjct: 111 ETKERNADLDWVNPKLDER---LQLELGQRQLEENAKKR--LEARKKLPTMKYADDIIQA 165
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVE 258
V NQV+LI G TGCGKTTQVPQ LL+ S+G +C+I+CTQPRRISA ++AE +S E
Sbjct: 166 VRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYE 225
Query: 259 RGENIGDNIGYKIRLES-KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA 317
R E++G+++GY+IRLES K + +SI +CT GVLL+ L S P ++S
Sbjct: 226 RCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSD-----------PLMHNLSV 274
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVP 377
L I+DEIHER +D ++ +++ +LP P L++ILMSAT+ F YF CP+ ++
Sbjct: 275 L---ILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIE 331
Query: 378 GFTYPVKSFYLEDVLS 393
G +PVK YLEDVLS
Sbjct: 332 GVMFPVKMLYLEDVLS 347
>gi|388583904|gb|EIM24205.1| P-loop containing nucleoside triphosphate hydrolase protein [Wallemia
sebi CBS 633.66]
Length = 1377
Score = 252 bits (644), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 246/458 (53%), Gaps = 49/458 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L +N LI LI + L ++C D + A L+F+ G +I + D L +P F D
Sbjct: 828 LNHLNEYLIPYDLIVKTLERLCTDGQWIQYSNATLIFMSGMAEIRRMNDMLQEHPLFGDA 887
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++F I PLHS + + +Q VF PPPG RKI+++TNIAET ITI DV VID+GR +E
Sbjct: 888 AQFSIYPLHSSIATDKQGAVFDIPPPGVRKIVIATNIAETGITIPDVTCVIDTGRHREMR 947
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIP 709
+D +S L +++K++AKQR GRAGR + G+C+HL+++ R + L D +PE+ R+
Sbjct: 948 FDEKRQISRLLDCFIAKSNAKQRRGRAGRVREGLCFHLFTRDRFENKLSDHPLPEMTRLS 1007
Query: 710 IEELCLQVKLLDPN--CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+++L L++K+++ +IED L + LDPP S+ ++ AI L ++ AL +E +T +G
Sbjct: 1008 LQDLALRIKIMNVQIGSSIEDVLMRALDPPTSINVQRAISSLIEVKALRSNEDITPMGRI 1067
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V + K L FA++ CLD ALT+A + + PF P ++ A AK +
Sbjct: 1068 LSRLPVDVHIGKFLLFAVVFGCLDSALTIAATLNSKSPFVTPF--GQEVEAMNAK---KA 1122
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD + ++ A+ WK A Q A+ +C Q ++S + + +R QL + L+
Sbjct: 1123 YNDGNSDFVVIVKAYNGWKQALQNQGWAFMKRYCDQNYLSLQNLQSIEELRIQLMSYLVD 1182
Query: 885 NGFI----------------------------PEDVSSCSHNARVPGIIHAVLMAGLYPM 916
F+ PED+ +HNA I+HA + AGL+P
Sbjct: 1183 ANFVTLNPKQIRELNAARMVRTGRGSIRFFETPEDL---NHNAGDYSILHAAIAAGLFPK 1239
Query: 917 VARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
+ L H + ++ A V +HP S N K+ +++
Sbjct: 1240 LISLD-WHTKTMKTIQ--NNAIVSIHPSSPNSKIRWQE 1274
Score = 229 bits (583), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 193/312 (61%), Gaps = 30/312 (9%)
Query: 130 EKLDANQSRKSDKTR-GKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ-------I 181
EK++A S+ R K V + + +SKAE +V++ +++KD RQ +
Sbjct: 496 EKMEATPSKSRSTPRPTKTVGMDVESPLSKAE-GTQVDT---KLQKDFEKRQQTDAYQTM 551
Query: 182 VEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCT 241
++ R+ LPI++++ I T+DS+QV+++SGETGCGK+TQ+P F+LE SKG+ CKI CT
Sbjct: 552 LQARNALPIAAYRQTILDTIDSSQVMVLSGETGCGKSTQLPAFILEDALSKGQKCKIYCT 611
Query: 242 QPRRISATSVAERISVERGENIG------DNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
+PRRISA S+ R+SVE GE G +GY +RLES GK + +V+ TNG+ LR+L
Sbjct: 612 EPRRISAISLGSRVSVELGEKPGMVGGPESLVGYAVRLESHIGKSTKLVYATNGIALRML 671
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
S + K A DD LTHII+DE+HER SDF+L +++ +L + +L++ILM
Sbjct: 672 ESSNGT-----DGKSAFDD---LTHIIIDEVHERSIESDFLLIVLKSLLQQHKNLKVILM 723
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDP 415
SAT+D+++ S YFGGCPVI VPG T+PV+ YLED + +D S N
Sbjct: 724 SATVDSEKISAYFGGCPVISVPGRTFPVEVRYLEDAIEF----SGFKVDETSPYARNRYD 779
Query: 416 ELTEENKSTLDE 427
++ + KS L E
Sbjct: 780 KIANKGKSQLTE 791
>gi|31198025|ref|XP_307960.1| AGAP002223-PA [Anopheles gambiae str. PEST]
gi|21291672|gb|EAA03817.1| AGAP002223-PA [Anopheles gambiae str. PEST]
Length = 1289
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 263/506 (51%), Gaps = 60/506 (11%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDS-----EDGAILVFLPGWEDINKTRDRLLANPFF 587
K L ++P I+ LIE +L I D+ +G+IL+FLPG +I + L + F
Sbjct: 719 KALYLMDPLRINPELIEHVLTYIVDDTSHGWPREGSILIFLPGLAEIQTVHESLAESKLF 778
Query: 588 RDTS-KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
+FV+IPLHSM+ + +Q VF++PP G RKI+LSTNIAET++TIDD V+V+D G+M
Sbjct: 779 GPRGDRFVLIPLHSMLTNEEQALVFRKPPKGKRKIVLSTNIAETSVTIDDCVFVLDCGQM 838
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEI 705
KEK +D N+ +L+ WVS+A+A QR GRAGR G+C HLY++ R Q VPEI
Sbjct: 839 KEKRFDSNRNMESLEMVWVSRANALQRKGRAGRVMPGVCIHLYTRPRFTHHILGQPVPEI 898
Query: 706 KRIPIEELCLQVKLLDPNCN--IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
RIP+E L L++K L + + L ++PP I+ A L D+GAL L+E++T
Sbjct: 899 HRIPLEPLLLRIKTLPTLAERALNEVLGAIIEPPSVENIQAAKKRLIDVGALDLEEQLTP 958
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG L L V + K++ F + CLD LT+A Y+ PF P ++ +F
Sbjct: 959 LGHHLSALPVDVRIGKLMLFGAIFQCLDSVLTMAAILSYKSPFVSPFGKRDEADNRKRQF 1018
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTE 881
+A+ SD L +++A+ W A Q+ + A F + ++S + + M+ Q
Sbjct: 1019 AIAN-----SDHLTMLSAYRRWLEAAQKSRYAGQCFAEENYLSGKTLATIGEMKYQFLEL 1073
Query: 882 LIKNGFIPEDVSSCSHNAR---------------VPGI----IHAVLMAGLYPMVARLRP 922
L+ GF+P D+S S R V G + A+L A LYP V ++
Sbjct: 1074 LVSIGFVPIDLSGRSRAKRQQLDDLLKLTGAEINVNGTNNRLLAAILCAALYPNVVKILT 1133
Query: 923 PHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYD 964
P K+ FV A GA V LHP S+N + + + P +VY
Sbjct: 1134 PEKS---FVTGAVGAVPRLPQASDLRFKTQEDGYVALHPSSVNATVGYFGS---PFLVYQ 1187
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLA 990
E + + +R T+V LP++L +
Sbjct: 1188 EKMK-TSRIFIRETTMVPLLPMVLFS 1212
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 169/281 (60%), Gaps = 33/281 (11%)
Query: 124 DDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRI---EKDANLRQ 180
DDG GE L + R G++ PK++ ++ + ++ + + +A ++
Sbjct: 392 DDGGSGENLPTHHQRG---VTGRQTG----PKLNPDQLMKEDRNIVRKFMDKQTNAAYKE 444
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK--- 237
+++ R LP + I + ++++Q+++ISGETGCGK+TQVPQFLL+ + K
Sbjct: 445 MLKNRRNLPAWTKMSEIVALMEAHQILVISGETGCGKSTQVPQFLLDDWLLQSSKLKPNE 504
Query: 238 ------IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVL 291
I+CTQPRR+SA VAER++ ER E IG+ +GY+IRLE+K + + FCT G+L
Sbjct: 505 PLRHVEIICTQPRRLSAIGVAERVADERNEKIGNTVGYQIRLENKISSSTRLTFCTTGIL 564
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
LR L S ++ +THIIVDE+HER SDF+L I++++L L+
Sbjct: 565 LRRLQSDPT--------------LATVTHIIVDEVHERSEESDFLLLILKELLTKRTDLK 610
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+ILMSATL+++ F+ YFG PV+ +PG T+PV+ +LED+L
Sbjct: 611 VILMSATLNSNLFASYFGDIPVLDIPGRTFPVEQLFLEDIL 651
>gi|389751581|gb|EIM92654.1| P-loop containing nucleoside triphosphate hydrolase protein [Stereum
hirsutum FP-91666 SS1]
Length = 1473
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 232/443 (52%), Gaps = 40/443 (9%)
Query: 538 VNPELIDLVLIEQLLRKICMD-----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
++ LI LI +LL +IC + + A+L+F+PG +I + D L+ +P F +
Sbjct: 913 LDERLIPYDLIMRLLERICFEDPAYFTYSSAVLIFMPGIAEIRRLNDLLMDHPAF-NNQD 971
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
F+I PLHS + S Q VF PP G RKI+++TNIAET ITI D+ VIDSG+ +E +D
Sbjct: 972 FIIYPLHSTISSENQGAVFDIPPEGVRKIVIATNIAETGITIPDITCVIDSGKHREMRFD 1031
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIPIE 711
+S L ++V+K++A QR GRAGR Q G+ +HL+++LR +L D +PE+ R+ +
Sbjct: 1032 EKRQLSRLVETYVAKSNAAQRRGRAGRVQNGLAFHLFTKLRHDTLMADHPLPEMMRLSLS 1091
Query: 712 ELCLQVKLLDP--NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+L L++K++ +IED L + LDPP SV I+ AI L ++ AL+ E++T +G L
Sbjct: 1092 DLALRIKIMKVKLGTSIEDVLLRALDPPSSVNIQRAISALVEVRALTTTEEITPMGRLLS 1151
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + K L A L CLDPALT+A + + PF P ++ A F + +
Sbjct: 1152 ALPTDVHLGKFLLLATLFRCLDPALTIAATLNSKSPFLTPFGHEDEADRAKASFRIEN-- 1209
Query: 830 GGQSDQLAVIAAFECWKNAKQR-GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
SD L + AF W+ A G FC + F+S + + +R+Q LI +GFI
Sbjct: 1210 ---SDFLTLHNAFSSWRRASANPGFVRKFCRKNFLSHQNLQQIEELRQQFLGYLIDSGFI 1266
Query: 889 PEDVSSCSHNAR------------VPG----------IIHAVLMAGLYPMVARLRPPHKN 926
D + +R VP I++A L AGLYP + + P
Sbjct: 1267 NVDRAFVKDLSRARYGRNRSRLITVPAELDSNSTNYYIVNAALTAGLYPKILAIDPSSGQ 1326
Query: 927 GRRFVETAGGAKVRLHPHSLNFK 949
R + HP S+NFK
Sbjct: 1327 MRTITNNQAAS---FHPSSVNFK 1346
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 169/260 (65%), Gaps = 16/260 (6%)
Query: 141 DKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITST 200
D G R+ F PK+ +E ++ S + + ++ +R++LPI+ ++D I ST
Sbjct: 600 DTKNGNRLRQFSPPKIPPSE---QIASAFRERQDAPAYQDMLVQRNRLPIAHYRDEIIST 656
Query: 201 VDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERG 260
+D++Q++++SGETGCGK+TQVP F+LE S+G CKI CT+PRRISA S+A+R+S E G
Sbjct: 657 LDTSQIMVLSGETGCGKSTQVPSFILEDQLSRGNHCKIYCTEPRRISAISLAQRVSRELG 716
Query: 261 ENIG------DNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
+ G +GY IRLES +++ + F TNG+ LR+L +G S + A D+
Sbjct: 717 DAPGACGTMNSLVGYSIRLESNTSRNTRLAFVTNGIALRML--EGGS--GQNGMGTAFDE 772
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
+ THII+DE+HER SDF+L +++ +L L++ILMSAT+DA++ S YFGGCP++
Sbjct: 773 I---THIIIDEVHERSIESDFLLIVLKSLLQQRDDLKIILMSATVDAEKISTYFGGCPIL 829
Query: 375 QVPGFTYPVKSFYLEDVLSI 394
VPG T+PV + +LED +
Sbjct: 830 YVPGRTFPVDTRFLEDAVEF 849
>gi|340719968|ref|XP_003398416.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Bombus
terrestris]
Length = 1244
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 262/499 (52%), Gaps = 54/499 (10%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR 588
K L ++ I+ LIE L+ I + G+ILVFLPG+ +I +DRL N +F
Sbjct: 682 KNLFYMDHNAINYELIEATLQWITCGEHNYPKTGSILVFLPGFAEIIALKDRLNQNEYFS 741
Query: 589 -DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
T KF+II LHS + + +Q VFK+ RKI+LSTN+AET+ITIDD V+VIDSG+MK
Sbjct: 742 PKTGKFIIISLHSSLSNEEQSLVFKKSL--ARKIVLSTNLAETSITIDDCVFVIDSGKMK 799
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIK 706
E ++ N+ +L+ WVS+A+A QR GRAGR G+ HLY+ + Q VPEI
Sbjct: 800 ETRFNSNQNMESLEMCWVSRANALQRKGRAGRVMPGVSIHLYTSHKFKYQFSAQPVPEIL 859
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
RIP+E L L+++LL ++ + L K L+PP I +AI LQD+GA + + +T L
Sbjct: 860 RIPLEPLLLRIQLLHNGTKVDLHEVLGKMLEPPTEENISSAIKRLQDVGAFNSECTLTPL 919
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V+ + K++ F + CLD ALT+A +++PF +P EK+ AK E
Sbjct: 920 GHHLAALPVNVRIGKLILFGAIFCCLDSALTIAACLSHKNPFHIPF---EKRHEIDAKKE 976
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTEL 882
+ SDQL ++ A+ W A R A F + ++S + L ++ QL L
Sbjct: 977 ---FFTANSDQLTILKAYRKWLEAYTRNTSAGHAFAKENYLSVRTLYSLADIKYQLLELL 1033
Query: 883 IKNGFIPEDVSSCSHNA----RVPG-----------IIHAVLMAGLYPMVARLRPPHK-- 925
+ GF+P ++ N + G ++ +L A LYP V ++ P K
Sbjct: 1034 VSIGFVPVNLPKRQPNVDKIIEITGFELNINNDNYKLLQGLLCAALYPNVVKVLSPDKFF 1093
Query: 926 --------------NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
+ RF +T + V +HP S+NF + + + P +V+ E +
Sbjct: 1094 QIQPAGAVPTQTRPDQLRF-QTKNDSFVSIHPSSVNFHVGYFPS---PYLVFQEKVKT-S 1148
Query: 972 GMHVRNCTVVGPLPLLLLA 990
+ ++ ++V LPL+L +
Sbjct: 1149 KIFIKEVSMVPILPLILFS 1167
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 144/226 (63%), Gaps = 22/226 (9%)
Query: 173 EKDANLR--QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
EK N R +++E R +LP S I + NQV++ISGETGCGK+TQVPQFLL+ W
Sbjct: 402 EKLTNPRYNKMIEIRERLPAWSKMYEILDVIHKNQVIIISGETGCGKSTQVPQFLLDD-W 460
Query: 231 -----SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVF 285
+ E I+CTQPRRIS VAER++ ER E IGD +GY+IRLESK + + F
Sbjct: 461 IINRSASKEHINIICTQPRRISTIGVAERVATERNERIGDTVGYQIRLESKISNRTRLTF 520
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G+LL+ ++S +THIIVDE+HER SDF+L +++++L
Sbjct: 521 CTTGILLQRFA--------------VNPELSDVTHIIVDEVHERSAESDFLLMLLKELLS 566
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+L++ILMSATL ++ FS YF G P++ +PG T+PV+ ++ED+
Sbjct: 567 RRSNLKVILMSATLRSEIFSTYFKGAPILCIPGRTFPVEQIFVEDL 612
>gi|348684238|gb|EGZ24053.1| hypothetical protein PHYSODRAFT_481054 [Phytophthora sojae]
Length = 1390
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 263/508 (51%), Gaps = 46/508 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE------------DGAILVFLPGWEDINKTRDRLL 582
L ++P +++ LI+ LL I +++ ++LVFLPG ++I D L
Sbjct: 803 LERMDPSVVNYELIQALLEHITTETDMLSLSKKSDQRRSASVLVFLPGLQEITTLLDILA 862
Query: 583 ANPFFR---DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
+ R +F ++PLHS + + +Q+++F R PG +II +TNIAET++TIDDV
Sbjct: 863 GSRLLRHDPQGREFELLPLHSSLSAQEQQRIF-RQRPGVIRIIAATNIAETSLTIDDVKV 921
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ--LRAASL 697
VIDSGR+K+ S+D + L+ WV++A+AKQRAGRAGR G C+ L+ Q R+ L
Sbjct: 922 VIDSGRVKQMSHDAQRRTNVLEEIWVARANAKQRAGRAGRTSGGSCFRLFPQSVFRSVML 981
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIE-----DFLQKTLDPPVSVTIRNAIIVLQDI 752
+ VPEI+R P+ LCLQ+K N E +FL+ LDPP V+IR+A+ L +I
Sbjct: 982 -EQPVPEIRRAPLTSLCLQIKTFGVGGNEEKDGCGEFLRACLDPPDDVSIRDALEELFEI 1040
Query: 753 GALSL-DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPIS 811
GAL DE +T+LG L L V + K+L L D A T A + + PF P
Sbjct: 1041 GALKREDESLTKLGAHLARLPVDVKVGKLLLLGALFGVFDAASTCAAVLETKSPFVAPFG 1100
Query: 812 PNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW-----FCSQYFVSSG 866
+ + F + G SD L + AFE W+ Q G+E FC Q F+S
Sbjct: 1101 RQSEMKQARQTFAI-----GASDLLTDVNAFEAWRYVVQHGKENGINEKNFCHQNFLSHR 1155
Query: 867 VMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI--IHAVLMAGLYPMVARLRPPH 924
+ L +++Q + + + GF+P S V + I AVL AGL P + PP
Sbjct: 1156 GLRELSKLKRQFRGLVTQLGFLPPTASEVDERMTVQQLATISAVLYAGLAPNLVHAEPPS 1215
Query: 925 KNG--RRFVETAGGAKVRLHPHSLNFKL-SFKKTDDCPLMVYDEITRGDGGMHVRNCTVV 981
NG R + + V +HP S+N+K+ SF+ ++ V ++ +++ + ++V
Sbjct: 1216 GNGPKRAVLRERDHSIVVVHPGSINYKVASFRASNFLTYAVKLHTSQ----VYLPSSSLV 1271
Query: 982 GPLPLLLLATEIAVAPAPDNEDDDEDDD 1009
PL + L + A+ P P D+D +
Sbjct: 1272 LPLAVCLFSH--ALEPLPQLRRKDKDGN 1297
Score = 193 bits (491), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 151/233 (64%), Gaps = 35/233 (15%)
Query: 182 VEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK---GETCKI 238
+ +R LPI+SFK + + + V+LISGETGCGK+TQVPQFLLE + G +I
Sbjct: 507 LSQRESLPIASFKKQVVEMLSDHDVILISGETGCGKSTQVPQFLLEDLLLSESGGARGQI 566
Query: 239 VCTQPRRISATSVAERISVERGEN---IGDNI-GYKIRLESKGGKHSSIVFCTNGVLLRL 294
VCTQPRR++A S+AER+S E GE+ GD++ G++IRLE++ + + ++FCT G+LLR
Sbjct: 567 VCTQPRRLAAISLAERVSEELGESNMGTGDSLTGFQIRLETRMTRRTRLLFCTTGILLRK 626
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP--------- 345
L Q L E ++H+IVDE+HERD SD +LA++R L
Sbjct: 627 L--QDPHTLGE-----------EVSHVIVDEVHERDLQSDVLLAMLRQFLAEGNAARRRK 673
Query: 346 ---SYPHLRLILMSATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVL 392
+ P L++ILMSATL+A F QYFGG CP+I+VPG T+PV+ FYLEDVL
Sbjct: 674 FGGTLPPLKVILMSATLNAASFQQYFGGAAVCPMIEVPGRTFPVEQFYLEDVL 726
>gi|426201536|gb|EKV51459.1| hypothetical protein AGABI2DRAFT_182424 [Agaricus bisporus var.
bisporus H97]
Length = 1458
Score = 251 bits (640), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 235/462 (50%), Gaps = 44/462 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMD-----SEDGAILVFLPGWEDINKTRDRLLANPFFRD 589
L + I LI +LL KIC + + AIL+F+PG +I + D L +P F
Sbjct: 898 LNLFDERFIPYELIIRLLEKICFEDVKYNAYSSAILIFVPGIGEIRRINDALNGHPRFGS 957
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
+F I PLHS + S Q VF+ P G RKI+++TNIAET ITI D+ VID+G+ +E
Sbjct: 958 DEEFKIYPLHSTLSSENQNSVFEVPLAGIRKIVIATNIAETGITIPDITCVIDTGKHREM 1017
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRI 708
+D +S L ++V+K++A QR GRAGR Q G+C+HL++++R S + D PE+ R+
Sbjct: 1018 RFDEKRQISRLVETFVAKSNASQRRGRAGRVQQGLCFHLFTKIRHDSQMADNPQPEMMRL 1077
Query: 709 PIEELCLQVKLLDPN--CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766
+ +L L++K++ N +IE+ L + LDPP+SV ++ AI VL ++ AL+ E++T +G
Sbjct: 1078 SLSDLALRIKIMGINLGSSIENVLSQALDPPISVNVQRAIAVLIEVHALTPAEEITPMGR 1137
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L + K L A L CLDPALT+A A + + PF P + A F++
Sbjct: 1138 LLSKLPTDVHIGKFLLIATLFRCLDPALTIAAALNSKSPFLSPFGLEAEAERAKASFKI- 1196
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G SD L + AF+ W+ A G + FC ++S M + +R+Q LI +
Sbjct: 1197 ----GDSDFLTLHNAFDKWRKASANGAFVYKFCRVNYISHQTMQQIEELRQQFLAYLIDS 1252
Query: 886 GFIPEDVS----------------------SCSHNARVPGIIHAVLMAGLYPMVARLRPP 923
FI S N+ P II+A L+AGLYP V L
Sbjct: 1253 AFIQVHRSLIRDLNRARWNRMKSKPVALPTELDFNSSNPSIINAALVAGLYPKVLSLNTS 1312
Query: 924 HKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDD--CPLMVY 963
+ V +H S+NF KK D C Y
Sbjct: 1313 KSELKMIT---NNQVVSIHHSSVNFH---KKLSDIGCNYFAY 1348
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 149/227 (65%), Gaps = 14/227 (6%)
Query: 172 IEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS 231
+ + +N ++ +R LPI+ +++ I ++ NQV+++SGETGCGK+TQVP F+LE
Sbjct: 616 LRQSSNYNDMLMQRESLPIAKYRNNIIEILEHNQVLVLSGETGCGKSTQVPSFILEDQLL 675
Query: 232 KGETCKIVCTQPRRISATSVAERISVERGE------NIGDNIGYKIRLESKGGKHSSIVF 285
KG+ CKI CT+PRRISA S+A+R+S E GE + IGY IRLES +++ + +
Sbjct: 676 KGKPCKIYCTEPRRISAISLAQRVSRELGEPPNAVGTLNSLIGYAIRLESNITRNTRLAY 735
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
TNG+ LR+L S + + V LTHII+DE+HER SDF+L +++ +L
Sbjct: 736 VTNGIALRMLES--------GTGQGDGTAVDELTHIIIDEVHERTIESDFLLIVLKSLLV 787
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
P LR+ILMSAT+DA++ S YFG CP + VPG T+PV FYLED +
Sbjct: 788 QRPDLRVILMSATVDAEKISAYFGHCPTLHVPGRTFPVDVFYLEDAV 834
>gi|195030126|ref|XP_001987919.1| GH10845 [Drosophila grimshawi]
gi|193903919|gb|EDW02786.1| GH10845 [Drosophila grimshawi]
Length = 934
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 269/507 (53%), Gaps = 39/507 (7%)
Query: 504 QENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGA 563
+ +QPE +I+ ++ S ++LD+ + D+ + L+ IC GA
Sbjct: 354 RHDQPEHRAMIEPYLRRQ-RGSYDNKVLDQLRLPESEGCEDIDFVADLVYYICSSQSSGA 412
Query: 564 ILVFLPGWEDINKTRDRLLANPF------FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPG 617
ILVF+PG++ I+K + L NP +RD + ++ PLHS++PSV+Q+ VF+R P G
Sbjct: 413 ILVFMPGYDKISKLHN-TLTNPRSALGQRWRD--QLIVYPLHSLLPSVEQQSVFRRAPQG 469
Query: 618 CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRA 677
RK+I+ST IAET++TIDDVVYVI++GR K SYD N+ L+ WV+ A+ +QR GRA
Sbjct: 470 KRKVIISTIIAETSVTIDDVVYVINTGRTKVTSYDIETNIQALEECWVTLANTQQRKGRA 529
Query: 678 GRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED---FLQKTL 734
GR Q GICY+L+S+ R A + + PEI R +E + L +KLL +I+D F +
Sbjct: 530 GRVQPGICYNLFSRAREAQMAEVPTPEILRCKLESIVLSLKLL----HIDDPYAFFPTMI 585
Query: 735 DPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL 794
D P + NA+ +L+ I AL ++T LG L L + P M KM+ + L CLDP
Sbjct: 586 DAPDQKAVSNAVNLLKRIEALDNVGQLTPLGLHLAKLPIDPQMGKMILISALFRCLDPIT 645
Query: 795 TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQE 854
+ A A ++ PF P+ +++R K +L+ +SD L V ++ + + +
Sbjct: 646 SAAAALSFKSPFYTPM--GQERRVDEVKRKLSRQM--RSDHLMVHNTICAYRESCEAHRY 701
Query: 855 AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNA------RVPGIIHAV 908
FC F+S + L M++Q L F+ S C H++ ++P ++ A+
Sbjct: 702 RDFCYSNFISQRTIQQLERMKQQFADLLCNYKFLTS--SDCLHDSSNINSEKIP-LLRAI 758
Query: 909 LMAGLYPMVARLRPPH--KNGRRFVE---TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVY 963
+ GLYP +A L KN R + T G + HP S+N S ++ D VY
Sbjct: 759 IGGGLYPNMAHLCKSRQIKNRVRAIHNMSTDDGRRCNFHPSSVN---SGERGFDSNYFVY 815
Query: 964 DEITRGDGGMHVRNCTVVGPLPLLLLA 990
+ + +++ + T+V P+ L++
Sbjct: 816 FQRQKS-TALYLLDATMVFPMALIIFG 841
Score = 197 bits (500), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 142/222 (63%), Gaps = 17/222 (7%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG-- 233
++R EER KLP ++ I V+ NQVVLI G TGCGKTTQVPQ LL+ KG
Sbjct: 134 GDVRARYEERMKLPTMAYAADIIEAVEQNQVVLIVGSTGCGKTTQVPQLLLDDCIEKGIG 193
Query: 234 ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLES-KGGKHSSIVFCTNGVLL 292
+C+IVCTQPRRISA SVAER+S ER E++G ++GY+IRLES K + +SI +CT GVLL
Sbjct: 194 SSCRIVCTQPRRISAISVAERVSYERVESLGQSVGYQIRLESRKPRERASITYCTTGVLL 253
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
+ L S P S L ++DEIHER +D ++A+++ +LP P L++
Sbjct: 254 QQLQSD-----------PLMHSASVL---LLDEIHERSVETDVLMALLKLILPHRPALKV 299
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
ILMSAT+ F YF C + ++ G YPVK YLEDVL++
Sbjct: 300 ILMSATVREQDFCDYFDNCRMFRIEGVMYPVKMLYLEDVLTL 341
>gi|327277433|ref|XP_003223469.1| PREDICTED: ATP-dependent RNA helicase A-like [Anolis carolinensis]
Length = 1253
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 247/467 (52%), Gaps = 22/467 (4%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
+++A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + +
Sbjct: 616 RHMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKYLEMNPHFGN-QR 674
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+ I+PLHS +P +Q+KVF PPG K+ILSTNIAET+ITI+DVVYVIDS + K K +
Sbjct: 675 YRILPLHSQIPREEQRKVFDPVPPGMTKVILSTNIAETSITINDVVYVIDSCKQKVKLFT 734
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEE 712
+NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E
Sbjct: 735 AHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHE 794
Query: 713 LCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLS 772
+ L +KLL I FL K ++PP + A L+++ AL ++++T LG L L
Sbjct: 795 IALSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDCNDELTPLGRILARLP 853
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
+ P + KM+ + D T++ A+ + +PF +E KR A
Sbjct: 854 IEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYVHRNFAG--NRF 906
Query: 833 SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
SD +A+++ F+ W NA+ G+ E FC ++ + M + QL+ L+ +GF E
Sbjct: 907 SDHVALLSVFQAWDNARIGGETAEIRFCEHKRLNIATLRMTWEAKVQLKDILVNSGFPEE 966
Query: 891 DVSSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
+++ N P I+ ++L GLYP V HK R+ + T G + +H S+
Sbjct: 967 CLATQVFNNTGPDNSLDIVISLLAFGLYPNVCF----HKEKRKILTTEGRNAL-IHKSSV 1021
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
N S + CP V+ E R + + T+V PL LLL ++
Sbjct: 1022 NCPFSSQDMKYPCPFFVFGEKIRTR-AISAKAMTLVSPLQLLLFGSK 1067
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 162/241 (67%), Gaps = 20/241 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I++ ++S L ++E D L++I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 353 QISVDIKSNLMYQLENDQELQKILQERETLPVKGFEQGILEAIHRNPVVIIRGATGCGKT 412
Query: 219 TQVPQFLL-EHIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQ++L E+I S + C IV TQPRRISA SVAER+S ERGE G++ GY +R ES
Sbjct: 413 TQVPQYILDEYIHSGRAAECNIVVTQPRRISAVSVAERVSYERGEEPGNSCGYSVRFESI 472
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+S++FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 473 LPRPHASVMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 516
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
+L ++RD++ +YP +R+ILMSAT+D F +Y+ CP+I+V G T+PV+ ++LED + +
Sbjct: 517 LLVVLRDVVQAYPEIRVILMSATIDTSMFCEYYFNCPIIEVFGRTFPVQEYFLEDCIQMT 576
Query: 396 K 396
K
Sbjct: 577 K 577
>gi|119575311|gb|EAW54916.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29, isoform CRA_b [Homo
sapiens]
Length = 1268
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 198/338 (58%), Gaps = 21/338 (6%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 840 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 898
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 899 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 958
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 959 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1018
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1019 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1074
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1075 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1129
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVS 864
SD L + A+ WK A+Q G E +C + F++
Sbjct: 1130 MADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLN 1167
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 549 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 608
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 609 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 667
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 668 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 713
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 714 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 770
>gi|119575313|gb|EAW54918.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29, isoform CRA_d [Homo
sapiens]
Length = 1224
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 198/338 (58%), Gaps = 21/338 (6%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 840 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 898
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 899 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 958
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 959 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1018
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1019 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1074
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI R A ++L
Sbjct: 1075 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG-----RKDEADLAKSALA 1129
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVS 864
SD L + A+ WK A+Q G E +C + F++
Sbjct: 1130 MADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLN 1167
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 549 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 608
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 609 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 667
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 668 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 713
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 714 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 770
>gi|308801194|ref|XP_003075376.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus
tauri]
gi|116061932|emb|CAL52650.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus
tauri]
Length = 1546
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 157/467 (33%), Positives = 243/467 (52%), Gaps = 46/467 (9%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
GA L+F+PG +I + +L + RD I+PL+ + S Q+++F+R P G R
Sbjct: 1028 GAFLIFMPGQFEILRLIRKLEQSRLLEERDVGTLRILPLYGSLSSKDQRRIFERSPEGVR 1087
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
KI+++TNIAET++TIDDV YVID+GR KE YD +S L +WVS+A++KQR GRAGR
Sbjct: 1088 KIVVATNIAETSVTIDDVRYVIDTGRAKEMQYDSLRGLSVLADTWVSQAASKQRRGRAGR 1147
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
G + ++S+ + A++ Q PE+ R P+++LCL +K + + L L PP +
Sbjct: 1148 TAPGARFAMFSRAQFANMSPQQPPEMLRTPLQQLCLSIKAMSSE-PVAQTLGAALSPPDA 1206
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
++ A+ L+ + AL DE +T LG L + V + KML F L+ CLDP LT+A A
Sbjct: 1207 CSVSAALDELRALRALDPDEALTPLGRHLAQMPVDARIGKMLLFGALLGCLDPILTIAGA 1266
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ--EAWF 857
R F SP + + AA SL +SD L ++AA+ W A +RG+ E +
Sbjct: 1267 MSGRPLF---FSPKDNR--DAADRAKRSLSANKSDHLTMVAAYNGWAKACERGKPFERRY 1321
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS-----------CSHNARVPGIIH 906
C +YF+S + + R L GF+ + S N+ V ++
Sbjct: 1322 CEEYFLSQQALEAVRTSRSDYAQILADLGFVRREYLSNMRRHGSGGTEADSNSNVTRVVK 1381
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAGGA------------------KVRLHPHSLNF 948
A L+AG YP V R++ P ++V+T GA +V LHP S+NF
Sbjct: 1382 AALVAGFYPHVVRVKHPET---KYVQTNAGAVAKEANSRELKYYSKDLGRVFLHPTSVNF 1438
Query: 949 KLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
++ +VY E +++R+ T+VG LLL +++V
Sbjct: 1439 HCGKYESR---WIVYSERVE-TAKVYIRDNTMVGAYSLLLFGGDVSV 1481
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 134/223 (60%), Gaps = 27/223 (12%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVCTQ 242
RS LP S ++ +T V+ V+++SGETGCGK+TQVPQF+LE +G I+ TQ
Sbjct: 636 RSNLPASGSREEVTRAVNKASVIVLSGETGCGKSTQVPQFILESEIAAGRGGQTNIIVTQ 695
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRISA +AER++ ER E GD +GY +RLESK + ++FCT GVL+R L+S +
Sbjct: 696 PRRISAIGLAERVAAERCERCGDVVGYSVRLESKQSAKTRLLFCTTGVLIRRLLSDPL-- 753
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
+ TH+I+DE+HER SD +L ++R ++ P +R++LMSAT DAD
Sbjct: 754 ------------LENTTHVILDEVHERSVDSDLLLLLLRRVIAKNPKMRIVLMSATADAD 801
Query: 363 RFSQYF---------GGCPVIQV--PGFTYPVKSFYLEDVLSI 394
F YF G QV GFT+PV+ ++LEDV +
Sbjct: 802 LFDSYFKHPSPIAAVSGVSTTQVHIAGFTHPVREYFLEDVFEM 844
>gi|242075834|ref|XP_002447853.1| hypothetical protein SORBIDRAFT_06g016980 [Sorghum bicolor]
gi|241939036|gb|EES12181.1| hypothetical protein SORBIDRAFT_06g016980 [Sorghum bicolor]
Length = 1240
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 227/391 (58%), Gaps = 32/391 (8%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
++ L +N ++ID L+E L+ I + GAILVFLPG +I+ DRL A+ F S
Sbjct: 853 NQNLKHLNEDVIDFDLLEDLICYIDENCPPGAILVFLPGVAEIDLLIDRLSASVRFGGAS 912
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
I+PLHS++ Q+KVF+ PP RK+I++T+IAET+ITIDDV+YV+D+G+ KE Y
Sbjct: 913 SDWILPLHSLLGPSDQRKVFQSPPDNFRKVIIATDIAETSITIDDVIYVVDTGKHKENRY 972
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPI 710
+P +S++ W+S+A+AKQR GRAGR + G+C+ LY++ R + + FQVPE+ R+P+
Sbjct: 973 NPRKKMSSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFENIMRPFQVPEMLRMPL 1032
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
ELCLQ+K L +I+ FL K ++PP I +A+ +L +GA E+++ LG L
Sbjct: 1033 TELCLQIKSLHLG-DIKSFLLKAVEPPNEEAISSAVDLLYKVGAFEGHEELSPLGYHLAK 1091
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL--ASL 828
L V L+ KM+ + + CL P L++A Y+ PF P +EK+ AK L +L
Sbjct: 1092 LPVDVLIGKMMLYGAIFGCLSPVLSVAAFLSYKSPFLSP--KDEKQNVEKAKATLLNENL 1149
Query: 829 YGG-------QSDQLAVIAAFECW---------------KNAKQRGQEAWFCSQYFVSSG 866
G QSD L ++ A++ W +N + ++ FC +++++
Sbjct: 1150 DGSTSVTDNKQSDHLLMVIAYDKWSRILLQDSNKLVFEFQNGAKSARQ--FCHSFYLNNT 1207
Query: 867 VMNMLLGMRKQLQTELIKNGFI--PEDVSSC 895
VM+M+ MR Q T L G I P+D C
Sbjct: 1208 VMHMIRDMRLQFGTLLADIGLIDLPKDSLVC 1238
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/274 (40%), Positives = 166/274 (60%), Gaps = 26/274 (9%)
Query: 129 GEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKL 188
G +D+ + S KR AE A+ + L + K N +++E R+ L
Sbjct: 520 GISMDSGNTEGSKSLNEKRQTSMKSSMADHAESAILKKQLEDK-RKLPNYLKMLEARASL 578
Query: 189 PISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRI 246
PI+ K + N VV++SGETGCGKTTQVPQF+L+ + G +C IVCTQPRRI
Sbjct: 579 PIARQKQHFLQLLKENDVVVVSGETGCGKTTQVPQFILDDMIESELGGSCNIVCTQPRRI 638
Query: 247 SATSVAERISVERGENI-GDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
+A SVAER+S ER E+ G N +GY++RL+S + + ++FCT G+LLR L
Sbjct: 639 AAISVAERVSDERCESSPGSNDSLVGYQVRLDSARNERTKLLFCTTGILLRKL------- 691
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-----LRLILMSA 357
+ N+ D+S +TH++VDE+HER SDF+L ++++++ + L++ILMSA
Sbjct: 692 ---SGNR----DLSDVTHVVVDEVHERTILSDFLLIVLKNLVEKRSNQQGRKLKVILMSA 744
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
T+D+ F++YFG CPVI V G T+PV + +LEDV
Sbjct: 745 TVDSSLFARYFGECPVISVEGRTHPVSTHFLEDV 778
>gi|195351923|ref|XP_002042465.1| GM23309 [Drosophila sechellia]
gi|194124334|gb|EDW46377.1| GM23309 [Drosophila sechellia]
Length = 939
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 260/487 (53%), Gaps = 34/487 (6%)
Query: 522 LSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL 581
+ +S ++LDK + D+ I L+ IC + +GAILVFLPG++ I++ + +
Sbjct: 380 IRNSYDNRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYN-I 438
Query: 582 LANP------FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITID 635
L P +RD + PLHS++ S +Q+ VF+RPP G RK+I+ST IAET++TID
Sbjct: 439 LDKPKTPKGQRWRD--HMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTID 496
Query: 636 DVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA 695
DVVYVI+SGR K +YD N+ +L WV+KA+ +QR GRAGR + GICY+L+S+ R
Sbjct: 497 DVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRKGRAGRVRPGICYNLFSRARED 556
Query: 696 SLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED---FLQKTLDPPVSVTIRNAIIVLQDI 752
+ D PEI R +E + L +KLL +I+D FLQ ++ P I+ + +L+ I
Sbjct: 557 LMDDIPTPEILRSKLESIILSLKLL----HIDDPYRFLQTLINAPNPEAIKIGVELLKRI 612
Query: 753 GALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISP 812
AL +T LG L L + P M KM+ + L CLDP + A A ++ PF P+
Sbjct: 613 EALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLG- 671
Query: 813 NEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLL 872
++ R K +A +SD L V +++++ E FC F+SS + L
Sbjct: 672 -KESRVDEVKRRMAR--NMRSDHLLVHNTIIAYRDSRYSHAERDFCYNNFLSSMTLQQLE 728
Query: 873 GMRKQLQTELIKNGFIP----EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KN 926
M+ Q L F+ +D +S + ++P ++ A++ AGLYP +A LR +N
Sbjct: 729 RMKNQFSELLYNYKFLASPKCQDAASNKSSEKIP-LLRAIIGAGLYPNMAHLRKSRQIRN 787
Query: 927 GRRFVETAG---GAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGP 983
R + T G +V HP S+N S + D VY + + + + + T+V P
Sbjct: 788 RVRAIHTMATDDGRRVNFHPSSVN---SGESGFDSAYFVYFQRQKS-TDLFLLDSTMVFP 843
Query: 984 LPLLLLA 990
+ L++
Sbjct: 844 MALIIFG 850
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 161/255 (63%), Gaps = 23/255 (9%)
Query: 142 KTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTV 201
K R +D + PK+ + +++E S++E++A R + R KLP + D I V
Sbjct: 110 KERNANLD-WINPKLDER---LQLELEQSQLEENAKKR--LAARRKLPTMKYADNIIHAV 163
Query: 202 DSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVER 259
NQV+LI G TGCGKTTQVPQ LL+ S+G +C+IVCTQPRRISA ++AE +S ER
Sbjct: 164 RENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIVCTQPRRISAIAIAEWVSYER 223
Query: 260 GENIGDNIGYKIRLES-KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSAL 318
E++G+++GY+IRLES K + +SI +CT GVLL+ L S + + +L
Sbjct: 224 CESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPL--------------MHSL 269
Query: 319 THIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPG 378
+ +I+DEIHER +D ++ +++ +LP P L++ILMSAT+ F YF CP+ ++ G
Sbjct: 270 SVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEG 329
Query: 379 FTYPVKSFYLEDVLS 393
+PVK YLED+LS
Sbjct: 330 VMFPVKMLYLEDILS 344
>gi|222625798|gb|EEE59930.1| hypothetical protein OsJ_12573 [Oryza sativa Japonica Group]
Length = 966
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 239/419 (57%), Gaps = 17/419 (4%)
Query: 578 RDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDV 637
+D+L A+P D ++ +++ H + + +Q+ +F++PPP RKI+L+TN+AE +ITI+D+
Sbjct: 358 KDQLKAHPLLGDPNRVLLLACHGSMATAEQRLIFEKPPPNVRKIVLATNMAEASITINDI 417
Query: 638 VYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL 697
V+V+D G+ KE +YD NN L SW+SKASA+QR GRAGR Q G CYHLY + +
Sbjct: 418 VFVVDCGKAKETTYDALNNTPCLLPSWISKASARQRRGRAGRVQPGECYHLYPRCVYDAF 477
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL 757
D+Q+PE+ R P+ LCLQ+K L +I +FL L PP + ++NA+ L+ IGAL
Sbjct: 478 ADYQLPELLRTPLNSLCLQIKSLQVG-SIGEFLSAALQPPAPLAVQNAVEFLKMIGALDE 536
Query: 758 DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR 817
+E +T+LG L L V P + KML + C+DP LT+ RDPF LP +++
Sbjct: 537 NENLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILTVVAGLSARDPFLLP--QDKRDL 594
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQ 877
A AK ++ SD +A++ A+E WK+A++ G +C + F+S+ + + +RKQ
Sbjct: 595 AGTAKSRFSA--KDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQ 652
Query: 878 LQTELIKNGFIPEDV---SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETA 934
L G + D +S SHN ++ ++ +GL+P + + H+ +T
Sbjct: 653 FSYILKDAGLVDSDANTNNSLSHNQ---SLVRGIICSGLFPGITSV--VHRENSMSFKTM 707
Query: 935 GGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
+V L+ +S+N K +T P +V+ E + + + +R+ T V L+L +
Sbjct: 708 DDGQVLLYANSVNAKY---QTIPYPWLVFGEKVKVN-AVFIRDSTGVSDSILILFGGAV 762
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 10/113 (8%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETCK 237
+++E R LP K+ + + + NQV++ISGETGCGKTTQ+PQF+LE I S +G C
Sbjct: 198 KMLEFRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCN 257
Query: 238 IVCTQPRRISATSVAERISVERGENIGDN-IGYKIR-------LESKGGKHSS 282
I+CTQPRRISA +VAER+S ERGEN+G++ Y +R LE G K +S
Sbjct: 258 IICTQPRRISAMAVAERVSTERGENLGESGFTYPVRAHFLEDILERTGYKLTS 310
>gi|453083090|gb|EMF11136.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1583
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 248/480 (51%), Gaps = 41/480 (8%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF----RDTSKFVIIP 597
L+ + L+ L IC S+DGAIL FLPG ++I+ T + L+ +P F DTSKF I+P
Sbjct: 983 LVPVRLLTAALAHICTKSDDGAILAFLPGLQEISATMEFLVQHPIFGVDFNDTSKFKIMP 1042
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS +P QQK +F+ PPGCRKIIL+TNIAET++T+ DV YV+D G+++EK YD +
Sbjct: 1043 LHSSIPPDQQKLIFEPSPPGCRKIILATNIAETSVTVPDVKYVVDLGKLREKRYDQVKRI 1102
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
+ LQ+ W S ++A+QRAGRAGR G Y L++Q R ++ E+ R ++E CL +
Sbjct: 1103 TELQTVWESNSNARQRAGRAGRVSQGNYYALFTQQRRQAMSASGQAELLRSDLQETCLSI 1162
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K + +FL ++PP + + A+ L+ I A + DE++T LG L L VHP +
Sbjct: 1163 KAQGFQEPVAEFLADAIEPPPTKAVSLAVENLKSIEAFTPDEELTSLGRILSRLPVHPEL 1222
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
M+ I+ CLDP + +C + R F P+ + A+ + SD LA
Sbjct: 1223 GNMVLLGIVFRCLDPMIISSCMASERTLFVKPLGVAR----SIARRKHEVYAQDDSDHLA 1278
Query: 838 VIAAFECWKNA-KQRGQEAWFCSQY--FVSSGVMNMLLGMRKQLQTELIKNGFIP---ED 891
I AF + ++GQ F + F+ G + + ++ L + G + +D
Sbjct: 1279 YINAFRDLRTQLYEKGQSGTFAYAHDRFLHFGAFKSVDQTTRLVEQALREAGLVDMSHQD 1338
Query: 892 VS--------SCSHNARVPGIIHAVLMAGLYPMVARLR-----PPHKNGRRFVETAGGAK 938
S + + N+ ++ A+ +AG+YP +A R P H+ TA
Sbjct: 1339 RSNKYQLGGDALNANSNNTALLKALTLAGVYPNIAVRRAMTRSPVHR-------TASEDN 1391
Query: 939 VRLHPHSLNF---KLSFKKTDDCPLMVYDEITRGDGG--MHVRNCTVVGPLPLLLLATEI 993
V +HP S+N K + +TD + + + R G + +R+ T V PL L +
Sbjct: 1392 VMMHPSSMNASSGKPAVSETDQ--IYAFSTLARSVSGDSLFIRDSTFVTPLMAFLFGGRV 1449
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 146/262 (55%), Gaps = 41/262 (15%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
ESL R D+ L Q+ ++ LP+S + D + V S+ +I G TG GKTTQVPQ
Sbjct: 685 ESL-KRFNSDSRLVQLRNTKAGLPMSQYTDQVVDLVSSDVYSIIIGATGSGKTTQVPQIF 743
Query: 226 LEHIW--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK----GGK 279
L+H KG C I+CTQPRR++A+SVA+R++ ER E IG ++GY++R E + GG
Sbjct: 744 LDHAIKSGKGGYCDIICTQPRRLAASSVAQRVAAERDETIGTSVGYQVRGEVQLPRFGG- 802
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDV-SALTHIIVDEIHERDRYSDFMLA 338
SI +CT G+LL L K DD+ ++H+++DE+HERD + DF+L
Sbjct: 803 --SITYCTTGILLEQL-------------KWNTDDIMDNVSHLVIDEVHERDIFVDFLLI 847
Query: 339 IIRDMLPS-------YPHLRLILMSATLDADRFSQYFGG--------CPVIQVPGFTYPV 383
I++ + + PH ++LMSATLD FS+Y C + VPG T+PV
Sbjct: 848 ILKKAVKARQEAGKKVPH--IVLMSATLDQKLFSEYLPNTKDGKTVPCAALSVPGRTFPV 905
Query: 384 KSFYLEDVLSILKSAESNHLDS 405
YLE+++ + S + S
Sbjct: 906 TETYLEELVQDITSTHKSEFQS 927
>gi|324501852|gb|ADY40820.1| ATP-dependent RNA helicase A [Ascaris suum]
Length = 1225
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 177/491 (36%), Positives = 265/491 (53%), Gaps = 26/491 (5%)
Query: 514 IKKHMENA-LSDSMKQQLLDKYLATVNPEL-IDLVLIEQLLRKICMDSEDGAILVFLPGW 571
+ + MENA L DS + + K +T E I L +IE +L++I EDGA+L+FLPGW
Sbjct: 582 LTEQMENANLKDSEEHDVETKLASTHTLEDDIPLDVIEAILKEIDERGEDGAVLIFLPGW 641
Query: 572 EDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETA 631
DI + +P F + FVI+PLHS + S +Q VF+ P RKIILSTNIAET+
Sbjct: 642 SDIIQAISFFSNHPIFGNKDCFVILPLHSHLSSKEQHLVFESVSPNQRKIILSTNIAETS 701
Query: 632 ITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ 691
+TI+DVVYVIDS R KEK+Y NN+ + W SK + +QR GRAGR + G CYHL S+
Sbjct: 702 VTINDVVYVIDSCRAKEKTYTSRNNMVHYATVWASKTNLQQRRGRAGRVRNGFCYHLCSK 761
Query: 692 LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQD 751
L+ +L + + E+ R P+ + L VKLL ++ +FL K ++PP + A ++L++
Sbjct: 762 LKYETLEECRQAEMLRTPLHTIALAVKLLHLG-DVGEFLAKAIEPPPKEAVIEADLLLRE 820
Query: 752 IGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPIS 811
+ AL + ++TELGE L L V P++ KML A ++ D TL A PF
Sbjct: 821 LSALDSNGELTELGEILARLPVDPILGKMLVVATVLGVGDLMSTLIAALSSNPPFI---- 876
Query: 812 PNEKKRATAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVM 868
P+++ + E S G + SD +A+I F W++A G E FC Y ++ V+
Sbjct: 877 PHDRTDSKLT-MEQRSFSGKRFSDHIALICVFNQWRDACADGVRYERDFCEHYSLNRMVL 935
Query: 869 NMLLGMRKQLQTELIKNGFIPED------VSSCSHNARVPGIIHAVLMAGLYPMVARLRP 922
+ +++QL L+ PE +S+ +A V II ++L+ GLYP V R
Sbjct: 936 LSIRNVKQQLIHVLVNECRFPESLFAEIRISNTQPDANVDLII-SLLVYGLYPNVCYFR- 993
Query: 923 PHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP--LMVYDEITRGDGGMHVRNCTV 980
NGRR V T A ++ S+N + + P L V+ E + + + +
Sbjct: 994 ---NGRR-VFTLELATALINKQSVNVPIDGSEVFTFPSRLFVFSEKLQSK-VISCKQLSN 1048
Query: 981 VGPLPLLLLAT 991
+ PL LLL +
Sbjct: 1049 ITPLQLLLFGS 1059
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 138/212 (65%), Gaps = 19/212 (8%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI--VCT 241
+R LP+ ++D I N V+LI GETGCGK+TQV Q+LLE +GE + + T
Sbjct: 361 QREALPVFRYRDTILDMSAKNAVMLIKGETGCGKSTQVCQYLLEDFLLRGEGAQFAAIVT 420
Query: 242 QPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGV 300
QPRRISA ++AER++ ERGE +G++IGY +R ++ + + S++F T GVLLR L S
Sbjct: 421 QPRRISAITLAERVAEERGEILGNSIGYNVRFDAVYPRPYGSVMFMTVGVLLRKLES--- 477
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
+ +THII+DEIHERD +DF+L ++R+M+ Y +R+ILMSA++D
Sbjct: 478 -------------GLRGITHIIIDEIHERDINTDFVLVVLREMVRQYRDIRVILMSASID 524
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
F+ YFG CP +Q+ G T+ V+ F+LED++
Sbjct: 525 TALFTNYFGDCPTLQLQGRTFSVQYFFLEDIM 556
>gi|350408559|ref|XP_003488442.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Bombus
impatiens]
Length = 1244
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 285/554 (51%), Gaps = 70/554 (12%)
Query: 482 LSLGADCQLKAKDGRTALQLGEQENQPE----VAQIIKKHMENALSDSMKQQLLDKYLAT 537
+S G QL A+ +E++P+ + +IIK++ + +S Q K L
Sbjct: 639 ISYGIASQLAARSHYVP-----EESRPDEDLDLERIIKRYKD---YNSQAQ----KNLYY 686
Query: 538 VNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLANPFFR-DTSK 592
++ I+ LIE L+ I + G+ILVFLPG+ +I +DRL N +F T K
Sbjct: 687 MDHNAINYELIETTLQWITCGEHNYPKTGSILVFLPGFAEIIALKDRLNKNEYFSPKTGK 746
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
F+II LHS + + +Q VFK+ RKI+LSTN+AET+ITIDD V+VIDSG+MKE ++
Sbjct: 747 FIIILLHSSLSNEEQSLVFKKSI--ARKIVLSTNLAETSITIDDCVFVIDSGKMKETRFN 804
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ-VPEIKRIPIE 711
N+ +L+ WVS+A+A QR GRAGR G+ HLY+ + Q VPEI RIP+E
Sbjct: 805 SNQNMESLEMCWVSRANALQRKGRAGRVMPGVSIHLYTSYKFNYHFSAQPVPEILRIPLE 864
Query: 712 ELCLQVKLLDP--NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
L L+++LL ++ + L K L+PP I +AI LQD+GA + + +T LG L
Sbjct: 865 PLLLRIQLLHNGRKVDLHEVLGKMLEPPTEENISSAIKRLQDVGAFNSECTLTPLGHHLA 924
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + K++ F + CLD ALT+A +++PF +P EK+ AK +
Sbjct: 925 ALPVNVRIGKLILFGAIFCCLDSALTIAACLSHKNPFHIPF---EKRHEIDAK---KQFF 978
Query: 830 GGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
SDQL ++ A++ W R A F + ++S + L ++ QL L+ GF
Sbjct: 979 TANSDQLTILKAYKKWLEIYTRNTSAGHAFAKENYLSVRTLYSLADIKYQLLELLVSIGF 1038
Query: 888 IPEDVSSCSHNA----RVPG-----------IIHAVLMAGLYPMVARLRPPHKNGR---- 928
+P ++ N + G ++ +L A LYP V ++ P K+ +
Sbjct: 1039 VPVNLPKRQPNVDKIIEITGFELNINNDNYKLLQGLLCAALYPNVVKVLSPEKSFQIQPA 1098
Query: 929 ------------RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVR 976
RF +T + V +HP S+NF + + P +V+ E + + ++
Sbjct: 1099 GAVPTETRPEQLRF-QTKNDSFVSIHPSSVNFHVGHFPS---PYLVFQEKVKT-SKIFIK 1153
Query: 977 NCTVVGPLPLLLLA 990
++V LPL+L +
Sbjct: 1154 EVSMVPILPLILFS 1167
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 144/226 (63%), Gaps = 22/226 (9%)
Query: 173 EKDANLR--QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
EK N R +++E R +LP S I + NQV++ISGETGCGK+TQVPQFLL+ W
Sbjct: 402 EKLTNPRYNKMIEIRERLPAWSKMYEILDVIHKNQVIIISGETGCGKSTQVPQFLLDD-W 460
Query: 231 -----SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVF 285
+ E I+CTQPRRIS VAER++ ER E IGD +GY+IRLESK + + F
Sbjct: 461 IINRSASKEHINIICTQPRRISTIGVAERVAAERNERIGDTVGYQIRLESKISNRTRLTF 520
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G+LL+ ++S +TH+IVDE+HER SDF+L +++++L
Sbjct: 521 CTTGILLQRFA--------------VNPELSDVTHVIVDEVHERSAESDFLLMLLKELLS 566
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+L++ILMSATL ++ FS YF G P++ +PG T+PV+ ++EDV
Sbjct: 567 RRSNLKVILMSATLRSEIFSTYFKGAPILCIPGRTFPVEQIFVEDV 612
>gi|324501431|gb|ADY40638.1| ATP-dependent RNA helicase A [Ascaris suum]
Length = 1262
Score = 248 bits (633), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 177/489 (36%), Positives = 264/489 (53%), Gaps = 26/489 (5%)
Query: 516 KHMENA-LSDSMKQQLLDKYLATVNPEL-IDLVLIEQLLRKICMDSEDGAILVFLPGWED 573
+ MENA L DS + + K +T E I L +IE +L++I EDGA+L+FLPGW D
Sbjct: 584 EQMENANLKDSEEHDVETKLASTHTLEDDIPLDVIEAILKEIDERGEDGAVLIFLPGWSD 643
Query: 574 INKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAIT 633
I + +P F + FVI+PLHS + S +Q VF+ P RKIILSTNIAET++T
Sbjct: 644 IIQAISFFSNHPIFGNKDCFVILPLHSHLSSKEQHLVFESVSPNQRKIILSTNIAETSVT 703
Query: 634 IDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR 693
I+DVVYVIDS R KEK+Y NN+ + W SK + +QR GRAGR + G CYHL S+L+
Sbjct: 704 INDVVYVIDSCRAKEKTYTSRNNMVHYATVWASKTNLQQRRGRAGRVRNGFCYHLCSKLK 763
Query: 694 AASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIG 753
+L + + E+ R P+ + L VKLL ++ +FL K ++PP + A ++L+++
Sbjct: 764 YETLEECRQAEMLRTPLHTIALAVKLLHLG-DVGEFLAKAIEPPPKEAVIEADLLLRELS 822
Query: 754 ALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPN 813
AL + ++TELGE L L V P++ KML A ++ D TL A PF P+
Sbjct: 823 ALDSNGELTELGEILARLPVDPILGKMLVVATVLGVGDLMSTLIAALSSNPPFI----PH 878
Query: 814 EKKRATAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNM 870
++ + E S G + SD +A+I F W++A G E FC Y ++ V+
Sbjct: 879 DRTDSKLT-MEQRSFSGKRFSDHIALICVFNQWRDACADGVRYERDFCEHYSLNRMVLLS 937
Query: 871 LLGMRKQLQTELIKNGFIPED------VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
+ +++QL L+ PE +S+ +A V II ++L+ GLYP V R
Sbjct: 938 IRNVKQQLIHVLVNECRFPESLFAEIRISNTQPDANVDLII-SLLVYGLYPNVCYFR--- 993
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP--LMVYDEITRGDGGMHVRNCTVVG 982
NGRR V T A ++ S+N + + P L V+ E + + + + +
Sbjct: 994 -NGRR-VFTLELATALINKQSVNVPIDGSEVFTFPSRLFVFSEKLQSK-VISCKQLSNIT 1050
Query: 983 PLPLLLLAT 991
PL LLL +
Sbjct: 1051 PLQLLLFGS 1059
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 138/212 (65%), Gaps = 19/212 (8%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI--VCT 241
+R LP+ ++D I N V+LI GETGCGK+TQV Q+LLE +GE + + T
Sbjct: 361 QREALPVFRYRDTILDMSAKNAVMLIKGETGCGKSTQVCQYLLEDFLLRGEGAQFAAIVT 420
Query: 242 QPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGV 300
QPRRISA ++AER++ ERGE +G++IGY +R ++ + + S++F T GVLLR L S
Sbjct: 421 QPRRISAITLAERVAEERGEILGNSIGYNVRFDAVYPRPYGSVMFMTVGVLLRKLES--- 477
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
+ +THII+DEIHERD +DF+L ++R+M+ Y +R+ILMSA++D
Sbjct: 478 -------------GLRGITHIIIDEIHERDINTDFVLVVLREMVRQYRDIRVILMSASID 524
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
F+ YFG CP +Q+ G T+ V+ F+LED++
Sbjct: 525 TALFTNYFGDCPTLQLQGRTFSVQYFFLEDIM 556
>gi|443896472|dbj|GAC73816.1| ATP-dependent RNA helicase A [Pseudozyma antarctica T-34]
Length = 1674
Score = 248 bits (633), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/466 (32%), Positives = 245/466 (52%), Gaps = 48/466 (10%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINK 576
L + + + +D L +N +I+ LI ++L ++C++ + A L+F+PG +I K
Sbjct: 1098 GLGKAYRSKTIDT-LGRMNEYVINHDLIIKILERVCLEKDLEPYSAATLIFMPGLAEIRK 1156
Query: 577 TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
D L+ +P F F + PLHS + S Q VF PP G RKI+++TNIAET ITI D
Sbjct: 1157 CHDMLVDHPTFGGPG-FQLFPLHSTISSENQGAVFNVPPAGVRKIVIATNIAETGITIPD 1215
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
+ VIDSG+ +E YD +S L ++++++AKQR GRAGR Q GIC+HL+++ R S
Sbjct: 1216 ITCVIDSGKHREMRYDEKRQISRLVECFIARSNAKQRRGRAGRVQEGICFHLFTKYRHDS 1275
Query: 697 -LPDFQVPEIKRIPIEELCLQVKLLDPNC--NIEDFLQKTLDPPVSVTIRNAIIVLQDIG 753
L + +PE+ R+ +++L L++K++ +IE L + LDPP + ++ AI L ++
Sbjct: 1276 YLDEHPLPEMLRLSLQDLALKLKIMKFKIGDSIEHALSQALDPPSAANVQRAIAALVEVK 1335
Query: 754 ALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPN 813
AL+ E++T LG L + + M K L A L CLDPALT+A A + + PF P
Sbjct: 1336 ALTSGEEITHLGRHLSKMPLDVHMGKFLLVATLFKCLDPALTIAAALNSKSPFMTPFGKE 1395
Query: 814 EKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLG 873
+ F+L G SD L + AF ++ + + FCS+ F+S + +
Sbjct: 1396 LEADRAKQSFKL-----GDSDFLTIANAFNGFRRSTVQNHHRTFCSRSFLSIQNLLQIEE 1450
Query: 874 MRKQLQTELIKNGFIPED-----------VSSCSHNARVP----------------GIIH 906
+R+Q + LI GF+ D S N P ++H
Sbjct: 1451 LRQQYFSYLIDAGFVSVDDGFRQELNRLRYRSGGANYGKPKFMVIPAELDVNSSSLSMVH 1510
Query: 907 AVLMAGLYPMVARLRPPHKNGRRF-VETAGGAK-VRLHPHSLNFKL 950
A L AGLYP + H + + F ++T G ++ +HP S+NF++
Sbjct: 1511 ATLAAGLYPKLL-----HIDAKTFQLKTIGNSQPTSIHPSSVNFRV 1551
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 146/216 (67%), Gaps = 21/216 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LPI++ + I V++NQ+ ++SGETGCGK+TQVP ++LEH S+G CKI T+PR
Sbjct: 826 RQSLPIANHRQEILDLVENNQIFVLSGETGCGKSTQVPAYILEHCMSQGRNCKIYVTEPR 885
Query: 245 RISATSVAERISVERGE---NIGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+AER+S E GE ++G N +GY IRLES GK++ +V+ T G++LR+L +
Sbjct: 886 RISAISLAERVSEELGEPRKSVGSNDSLVGYAIRLESNVGKNARLVYATTGIVLRML--E 943
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + + +TH+I+DE+HER SDF+L I++ ++ L++ILMSAT
Sbjct: 944 GTA-------------FNEITHVIIDEVHERSIESDFLLIILKTLISHRKDLKVILMSAT 990
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+DA+R S+Y GGCP I VPG T+PV YLED + +
Sbjct: 991 VDAERISKYCGGCPTIAVPGRTFPVNVHYLEDAVEM 1026
>gi|281210192|gb|EFA84360.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
Length = 1417
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 247/479 (51%), Gaps = 67/479 (13%)
Query: 563 AILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
+ILVF+PG+ DI + + L + D++ ++PLHS + Q++VF+R P KII
Sbjct: 882 SILVFVPGFSDILQIINGLNGSA---DSNLMWLLPLHSSLTPKDQQRVFERAPASKTKII 938
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQA 682
++TNIAET+ITIDD+ V+D+GR+ + SY+ + S + W++KASA+QRAGRAGR A
Sbjct: 939 VATNIAETSITIDDIGIVVDTGRVNQMSYNAFTKNSMMSECWIAKASARQRAGRAGRTSA 998
Query: 683 GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL-----DPNCN---IEDFLQKTL 734
G+CY L+++ L + PEI R P+++LCL VKL +PN I DFL +
Sbjct: 999 GVCYKLFTKSMEQELAAQETPEILRTPLQQLCLHVKLFQSQSNNPNAKLKPIYDFLAMAI 1058
Query: 735 DPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL 794
+PP +++A+ L+ I AL +E++T LG L L V + KML F + CLDP L
Sbjct: 1059 EPPEQQLVQHAVDELKSINALDKNEQLTALGYHLSQLPVDIYIGKMLLFGCIFRCLDPIL 1118
Query: 795 TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQE 854
T+A Y+ PF S +K +KF +G QSD + A++ W+ + + G E
Sbjct: 1119 TIAATLSYKPPFI--TSSQDKSLRANSKFH----FGHQSDHFSFFIAYDHWRKSIREGNE 1172
Query: 855 AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS------------------CS 896
FC++ +S + + ++ Q +L + GF+P ++S C
Sbjct: 1173 YAFCTENHLSIPTLRTIQDLKFQFIEQLSEIGFLPNGLTSKKISKLQKSNMLDEVSESCG 1232
Query: 897 --HN--ARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA--------------- 937
+N A +I +VL AG+YP +AR+ P + + A GA
Sbjct: 1233 AIYNSFASNSKVIKSVLCAGMYPKIARIDLP---AATYTKVAAGAIQNKYDPHSLLLLTK 1289
Query: 938 ------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
KV +HP S+N S + P ++Y E + M + + T + L LLL +
Sbjct: 1290 VDKSKQKVFIHPRSVN---SNEGEFIAPFLLYHERVQ-TSRMFMHHTTNISALTLLLFS 1344
Score = 179 bits (454), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 146/230 (63%), Gaps = 22/230 (9%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKI 238
I++ R LP+ + K + +NQV++++GETG GK+TQ+PQ++LE + ++G C I
Sbjct: 586 ILKVRESLPVFAKKKQFIEMLSANQVMVVTGETGSGKSTQIPQYILEDMVTRGIGSQCNI 645
Query: 239 VCTQPRRISATSVAERISVER----GENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
VC+QPRRISA VA+R+S E + +G +GY+IR ESK + + F T G+LLR+
Sbjct: 646 VCSQPRRISAIGVADRVSAEWYGGDKQQLGSMVGYQIRNESKRSAATRLCFVTTGILLRM 705
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
++ ++P ++ ++HII+DE+HER +DF+L I++ +L P+L+LIL
Sbjct: 706 MLD----------SRPLEN----VSHIIIDEVHERSMDNDFLLIILKQLLRRRPNLKLIL 751
Query: 355 MSATLDADRFSQYF--GGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
MSATLDA + YF G + + GFTYPV++ YLED + + + +N+
Sbjct: 752 MSATLDAKLIANYFGIGESAIFSIAGFTYPVQNVYLEDSIKLTQYKPTNY 801
>gi|158296900|ref|XP_317231.4| AGAP008239-PA [Anopheles gambiae str. PEST]
gi|157014934|gb|EAA12366.4| AGAP008239-PA [Anopheles gambiae str. PEST]
Length = 932
Score = 247 bits (631), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 235/452 (51%), Gaps = 23/452 (5%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
LI +LL I DGAILVFLP + I + +P ++ ++ PLHS +P+ +
Sbjct: 433 LIVELLYYITCSKPDGAILVFLPSYMQITNVYKMINEHPHL-SKARLLVSPLHSKLPTRE 491
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q VF RPP G RKIILSTNIAET+ITIDD+VYV+++GR K Y+ N VS L+ W+S
Sbjct: 492 QTAVFDRPPDGVRKIILSTNIAETSITIDDIVYVVNAGRHKLNRYE--NGVSVLRDEWIS 549
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
++ QR GRAGR + GICYHLYS+ R + + PEI R+ +EE+ LQ+K+L
Sbjct: 550 VSNEIQRKGRAGRVREGICYHLYSRGRKRTFQENVEPEIVRVALEEVILQIKILQLG-EA 608
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
F+ LD P I +++ +L + A+ ++K+T LG L L + P KM+ A +
Sbjct: 609 RAFMAHLLDKPSDGIIESSLELLNRLNAIDDEQKLTPLGFHLARLPMDPRTGKMILLASI 668
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
C+DP ++A + ++ F P+ ++ KF S SD + + W+
Sbjct: 669 FSCIDPITSIAASLTFKTAFYRPLGKEKEVDRIKRKFAQDS----ASDHIMLANVIAEWR 724
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG--- 903
+G FC ++F++ + L M++Q L F S N R G
Sbjct: 725 EQPNKGS---FCGRHFLNGATLQQLANMKEQFAEYLHTAKFTAVARSDAGPNNRHAGNLE 781
Query: 904 IIHAVLMAGLYPMVARLRPPHK-----NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC 958
++ A++ AGLYP VA +R + +GR + G + +HP S+N ++
Sbjct: 782 LLRAIVGAGLYPNVAFVRKVIRSRNSPDGRPILNIEGLGRAEIHPGSVNGNRGVFHSN-- 839
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+VY ++ + + + + + TVV P PLL
Sbjct: 840 -FVVYYDMQKIN-ALTIFDTTVVNPFPLLFFG 869
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 147/218 (67%), Gaps = 18/218 (8%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVC 240
E R +LP + I ++ NQV+LI GETG GKTTQVPQ++LE + +G C+I+C
Sbjct: 171 EFRRRLPAYQSRTTILDMIERNQVILIKGETGSGKTTQVPQYILEEASACGRGARCRILC 230
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS--SIVFCTNGVLLRLLVSQ 298
TQPRRISA ++A R++ ER E +G+++GY+IRLE++ + + SI+FCT G++L ++ S
Sbjct: 231 TQPRRISAITLARRVAEERNERLGNSVGYQIRLEAERPRQAGGSIMFCTTGIVLTIMQSD 290
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
+ +S TH+++DEIHERD +D +LAIIR +LP LR+ILMSAT
Sbjct: 291 PL--------------LSEYTHLVLDEIHERDVITDLLLAIIRMVLPYRKDLRVILMSAT 336
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
L A+ FSQYF CP +++ G TYPV +YLED+L LK
Sbjct: 337 LTAETFSQYFNNCPTVEIRGITYPVTEYYLEDILDELK 374
>gi|170058514|ref|XP_001864955.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
gi|167877587|gb|EDS40970.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
Length = 1045
Score = 247 bits (631), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 239/454 (52%), Gaps = 23/454 (5%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF--VIIPLHSMVPS 604
LI +L+ I DGAILVFLP I+ + L A+ RD S+ +I PLHS VP
Sbjct: 519 LITELIYHISATKPDGAILVFLPSLAQISDVQKLLSAH---RDLSRMSTLIYPLHSKVPQ 575
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+ QK VF RP G RKIIL+TNIAET+ITIDDVV+V+++GR K ++ VS+L+ W
Sbjct: 576 LDQKAVFSRPQKGTRKIILATNIAETSITIDDVVFVVNAGRHKINMFE--EGVSSLRDEW 633
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
+S ++ QR GRAGR Q GICYHLY++ R L PEI R+ ++E+ L +K+L
Sbjct: 634 ISISNEIQRKGRAGRVQPGICYHLYTRGRRNVLLQNTPPEILRVALDEVILNIKILGLG- 692
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
F+ LD P I ++ +L + A+ D+ +T LG L L + P KM+ +
Sbjct: 693 EARAFMSHLLDRPTDDVIETSLELLNRLNAIDDDQTLTPLGYHLARLPMDPRTGKMVLLS 752
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+ C DP ++A + ++D F P ++ KF G SD L + E
Sbjct: 753 SIFSCADPISSIAASLSFKDAFYKPFGKEKEVGMVKRKFA----KGYHSDHLMLANVIEQ 808
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE-DVSSCSH--NARV 901
WK+ R + F + F++ G +N L M++Q L F+ V+S ++ N+
Sbjct: 809 WKDLSGRDVQH-FAYKNFLNLGTLNQLYNMKRQFCEYLYSAKFLQNAQVTSRANNLNSHN 867
Query: 902 PGIIHAVLMAGLYPMVARLRPPHKN-----GRRFVETAGGAKVRLHPHSLNFKLSFKKTD 956
++ A++ AGLYP VA +R +N GR + G + +HP S+N L+ +++
Sbjct: 868 DKLLKAIIGAGLYPNVAFVRKVIRNRNSPDGRSILNIEGQGRTTMHPSSVNSTLADFESN 927
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
++ YD+ G+ + + TVV P PL
Sbjct: 928 --FVVYYDKQKISGSGLTIFDTTVVNPFPLFFFG 959
Score = 212 bits (540), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 155/227 (68%), Gaps = 21/227 (9%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R EK +R++ R +LP + I +D +QV+L+ GETG GKTTQ+PQF+L+
Sbjct: 251 RKEKLGVMREV---RERLPAFGSQREILQMIDRHQVILVKGETGSGKTTQIPQFILDQAM 307
Query: 231 SK--GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS--SIVFC 286
SK G C+I+CTQPRRISA +++ER++ ERGE +GD++GY+IRL++K + + SIVFC
Sbjct: 308 SKRRGADCRIICTQPRRISAITLSERVAAERGEQLGDSVGYQIRLDAKKPRSAGASIVFC 367
Query: 287 TNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS 346
T G++L ++ S LKE S H+I+DEIHERD +D +L I++ +LP
Sbjct: 368 TTGIVLSIMQSDPC--LKEYS------------HLILDEIHERDVITDLLLGIVKKILPF 413
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
L++ILMSATL A+ FS+YF CP +++PG T+PV+ FYLED++S
Sbjct: 414 RKDLKIILMSATLTAETFSRYFNDCPTVEIPGLTFPVEEFYLEDIIS 460
>gi|308805210|ref|XP_003079917.1| helicase domain-containing protein (ISS) [Ostreococcus tauri]
gi|116058374|emb|CAL53563.1| helicase domain-containing protein (ISS) [Ostreococcus tauri]
Length = 1216
Score = 247 bits (631), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 208/363 (57%), Gaps = 14/363 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ ++ +ID LIE+LL + ++ GAILVFLPG ++ DRL +P F+D V
Sbjct: 829 LSRLDESVIDYDLIEELLAYVDETTDHGAILVFLPGIGEVTSLVDRLAGSPRFKDA---V 885
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
+ PLHS + + +Q++ F+ P G RKI+++TN+AET++TI+D+V VID+GR+KE+ +DP
Sbjct: 886 LTPLHSALTNAEQREAFRVPRTGVRKIVVATNVAETSVTIEDIVVVIDTGRVKERQWDPR 945
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEEL 713
+++L+ WVS+A+AKQRAGRAGR +AG+CY L++ RA S+ FQ+PE+ R P+ E+
Sbjct: 946 RGMASLEEGWVSRAAAKQRAGRAGRVRAGMCYALFTSHRANVSMRPFQIPEMHRAPLTEV 1005
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ+ LD + + L +PP I A L +IGA ++T LG L L V
Sbjct: 1006 VLQIASLDLHNDAAVVLGNAPEPPKEEAIAAAKKTLSEIGAFDELGRLTALGRHLAALPV 1065
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF------ELAS 827
++KML F +++ CL P LT+A Y+ PF + N + A F LA+
Sbjct: 1066 DARVAKMLLFGVILRCLSPILTIAATLSYKSPFQSSKASNSQVEAAMRAFAQPASDSLAA 1125
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G QSD + AA++ + A G+ A F + + M + MR Q L
Sbjct: 1126 --GQQSDHIVFAAAYDGYITASMEGRNAARRFAQKNALDMDTMRQIAEMRTQYAALLADM 1183
Query: 886 GFI 888
G +
Sbjct: 1184 GIM 1186
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 165/275 (60%), Gaps = 30/275 (10%)
Query: 133 DANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISS 192
D ++ KS + RG K + AE++ +++S + I++D+ +++ E+RSKLPI +
Sbjct: 495 DRDRESKSREDRG----FVSKLNVHHAELSERLKSQLTAIKEDSQWKKMFEKRSKLPICA 550
Query: 193 FKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATS 250
+ + SN +++ GETGCGKTTQVPQFLL+ +G C IVCTQPRR++ATS
Sbjct: 551 LAHDLLVQLRSNDAIVVCGETGCGKTTQVPQFLLDDAIERGHGGGCNIVCTQPRRVAATS 610
Query: 251 VAERISVERGE-----NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKE 305
+AER+S+ER E G +G+ +RL++K + + FCT G+LLR L QG L
Sbjct: 611 IAERVSIERCEKNGVGGAGSLVGHHVRLDAKITNSTRLTFCTTGILLRRL--QGDRML-- 666
Query: 306 ASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-----LRLILMSATLD 360
S +TH++VDE+HER DF+L ++RD+ ++L+LMSATL+
Sbjct: 667 ----------SDVTHVVVDEVHERSLDGDFLLTLLRDLPRRRREAGLQPVKLVLMSATLN 716
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
A+ FS Y GG P+I PG ++PV + +LE + L
Sbjct: 717 AELFSAYLGGAPIISAPGRSFPVDTIHLEQIYDTL 751
>gi|345488712|ref|XP_001604965.2| PREDICTED: dosage compensation regulator-like isoform 1 [Nasonia
vitripennis]
Length = 1259
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 238/456 (52%), Gaps = 20/456 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
I LIE LLR I + GA+L+FLPGW I L +P F +VIIPLHS +
Sbjct: 637 ISFELIESLLRYIKDQNIPGAVLIFLPGWNLIFALMKHLQQHPLFGGVD-YVIIPLHSQL 695
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P Q+KVF PPG KIIL+TNIAET+ITIDDVVYVIDS + K K + +NN++ +
Sbjct: 696 PREDQRKVFDPVPPGKTKIILTTNIAETSITIDDVVYVIDSCKAKMKLFTSHNNMTNYAT 755
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL L +KLL
Sbjct: 756 VWASKTNLEQRKGRAGRVRPGFCFHLCSKARYERMDEHMTPEMFRTPLHELALSIKLLRL 815
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+I FL K ++PP + A ++L+++ L ++++T LG+ L L + P + KM+
Sbjct: 816 G-SIGQFLSKAIEPPPIDAVIEAEVMLREMKCLDKNDELTPLGKILARLPIEPRLGKMMI 874
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ D AL+ A+ P + P E +R T + A SD +A++ F
Sbjct: 875 LGCMFRVGD-ALSTMAANSSTFPEVYNMGP-EMRRLTPQQRAFAG--ARYSDHVAMLHVF 930
Query: 843 ECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNAR 900
+CW+ A+ G+ E FC VS + + + QLQ LI GF E + N +
Sbjct: 931 QCWEEARTGGEYAENAFCDSKNVSLPTLRVTWEAKHQLQALLISAGFPEETLCPTPLNYQ 990
Query: 901 VPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKT 955
I A+L GLYP V HK R+ + T A + +H S+N +F++
Sbjct: 991 AGADPRLDTITALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVNCS-NFEQN 1044
Query: 956 DDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
P V+ E R + + T+V PL LLL +
Sbjct: 1045 FPYPFFVFGEKIRTR-AVSCKQMTMVSPLHLLLFGS 1079
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 151/229 (65%), Gaps = 19/229 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R+++ L+ R+KLP+ + K I ++ N V++I G TGCGKTTQV QF+L+
Sbjct: 372 RMQQSNELQMSNVNRAKLPVFAKKHEIMDAINENPVIIIRGNTGCGKTTQVCQFILDDYI 431
Query: 231 SKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
S G+ C I TQPRRISA SVA+RI+VER E +G ++GY +R ES + ++SI+FCT
Sbjct: 432 STGQGAYCSIAVTQPRRISAVSVADRIAVERCEPLGQSVGYSVRFESCLPRPYASIMFCT 491
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+ Y
Sbjct: 492 VGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHMY 535
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
P LR+ILMSAT+D FS+YFG CPVI++PG YPV+ ++LED + + K
Sbjct: 536 PDLRIILMSATIDTSLFSKYFGDCPVIEIPGRAYPVQQYFLEDCIEMTK 584
>gi|429852559|gb|ELA27691.1| DEAD/DEAH box [Colletotrichum gloeosporioides Nara gc5]
Length = 1324
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/444 (34%), Positives = 247/444 (55%), Gaps = 25/444 (5%)
Query: 518 MENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKT 577
++A DSM + + K A +N L++ + + ++ + G ILVFLPG +IN+T
Sbjct: 776 FDDARGDSMGKTI-QKLGARINYSLLNET-VRAIDSELSYAQKSGGILVFLPGVAEINQT 833
Query: 578 RDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDV 637
L +N S ++PLH+ + + +QK+VF PP G RK++++TN+AET+ITIDD+
Sbjct: 834 CRALQSN------SSLHVLPLHASLETKEQKRVFAAPPGGKRKVVVATNVAETSITIDDI 887
Query: 638 VYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL 697
V VIDSG++KE +YDP NN+ L+ +W S+A+ KQR GRAGR QAG CY LY++ +
Sbjct: 888 VAVIDSGKVKETTYDPVNNMRKLEENWASQAACKQRRGRAGRVQAGKCYKLYTRNLEQQM 947
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL 757
+ PEI+R+P+E++CL V+ + ++ FL ++ PP S + AI +LQ IGA+
Sbjct: 948 AERPEPEIRRVPLEQMCLSVRAMGMR-DVAAFLARSPTPPESTAVEGAIKLLQRIGAMD- 1005
Query: 758 DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR 817
E++T LG++L + +K++ + + CLD +T+A R PF +SP+E++
Sbjct: 1006 GEEMTALGQQLAMIPADLRCAKLMVYGAIFGCLDDCVTIAAILSTRSPF---LSPSERR- 1061
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG----QEAWFCSQYFVSSGVMNMLLG 873
AK G D L + AF W+ + G Q FC + F+S +N +
Sbjct: 1062 -NEAKEARMRFSKGDGDLLTDLEAFRHWEQMRYDGVGQRQLRSFCDENFLSYLTLNDISA 1120
Query: 874 MRKQLQTELIKNGFI-PEDVSSCSHNARVP-GIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
R Q + L + G + +DV+S +R ++ A+ + P +AR++ P K +F
Sbjct: 1121 TRMQYYSALREIGIVGSKDVNSLQSQSRSGMALLRALTASAFSPQIARIQYPDK---KFT 1177
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKT 955
T GAK L P + K ++T
Sbjct: 1178 STVSGAK-ELDPEARMIKYFSQET 1200
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 155/249 (62%), Gaps = 15/249 (6%)
Query: 153 KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGE 212
KP M K + + E L + ++D + ++++ +R LP ++ I VD N V +ISGE
Sbjct: 526 KPIMWKPDPRTREEWL--KRQEDPSWQKMISKRKTLPAWQVQEDIVRIVDENHVTIISGE 583
Query: 213 TGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYK 270
TG GK+TQ QF+L+ ++S+G ++ TQPRRISA +A+R++ ER +GD +GY
Sbjct: 584 TGSGKSTQSMQFILDELYSRGLGYCANMLVTQPRRISALGLADRVAEERCTRVGDEVGYA 643
Query: 271 IRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
IR E++ + I F T GVLLR L + G R+++ A DVS HI++DE+HER
Sbjct: 644 IRGENRRSNQTRITFVTTGVLLRRLQTSG-GRIEDVIASLA--DVS---HIVIDEVHERS 697
Query: 331 RYSDFMLAIIRDMLPSYPH-LRLILMSATLDADRFSQYFG----GCPVIQVPGFTYPVKS 385
+DF+L I+R++L + + L+L+LMSATLDA F YF ++++ G TYPV+
Sbjct: 698 LDTDFLLTIVREVLKTRKNLLKLVLMSATLDAASFKSYFTSQGLSVGLVEISGRTYPVED 757
Query: 386 FYLEDVLSI 394
+YL+D++ I
Sbjct: 758 YYLDDIIGI 766
>gi|355746719|gb|EHH51333.1| hypothetical protein EGM_10688 [Macaca fascicularis]
Length = 1194
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 258/497 (51%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSGANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAEXXXX 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 XXXVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 153/225 (68%), Gaps = 17/225 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
+ +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE + +G C +
Sbjct: 427 VWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNV 486
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVS 297
+ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 487 IITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQS 546
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P+ + VS H+IVDE+HERD +DF+L +++ + P LRL+LMSA
Sbjct: 547 N-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
T D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>gi|406860836|gb|EKD13893.1| helicase associated domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1476
Score = 246 bits (628), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 239/478 (50%), Gaps = 52/478 (10%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
ID L+ QLL KI +D + AILVFLPG +I D L+ +P F + + + PL
Sbjct: 943 IDFELVTQLLAKIALDDKLQIFSKAILVFLPGIGEIRSLNDMLIGHPVF--AANWYVYPL 1000
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+ F PPPG RKI+L+TNIAET ITI DV V+D+G+ +E +D +S
Sbjct: 1001 HSTIASEDQEAAFLVPPPGTRKIVLATNIAETGITIPDVTCVVDTGKHREMRFDERKQLS 1060
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIPIEELCLQV 717
L +++SKA+AKQR GRAGR Q G+C+HL+++ R L D Q PE+ R+ +++L ++V
Sbjct: 1061 RLLETFISKANAKQRRGRAGRVQEGLCFHLFTKYRHDELMADQQTPELLRLSLQDLAIRV 1120
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+ IE+ L + LDPP S IR A+ L D+ AL+ E +T LG +L L + +
Sbjct: 1121 KICKLG-GIEETLSQALDPPSSKNIRRAVDALIDVRALTPGEDLTPLGTQLARLPLDVFL 1179
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ F + CLD ++T+A + PF+ P RA A LA G SD L
Sbjct: 1180 GKLVLFGSIFKCLDASITIAAILSSKSPFSAPFGA----RAQADTVRLA-FRRGDSDLLT 1234
Query: 838 VIAAFECWKNAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQTELIKNGF--------- 887
V A+ WK G + FC + F+S + + ++ QL L+ +GF
Sbjct: 1235 VYNAYLAWKRVCVTGNNEYQFCRKNFLSQQTLLNIEDLKGQLVVCLVDSGFLPLTGEERA 1294
Query: 888 ----------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
IP+ ++ S N V +V+ YP + K+GR F
Sbjct: 1295 VLNRTRYSNRRRQFFDIPQRANANSDNDLVTS---SVIAWSFYPKLL-----IKDGRGFR 1346
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
A + LHP S+N K + + Y I + + T V ++LL
Sbjct: 1347 NVANNQSISLHPTSVN-----KGHHELKWLSYYHIMQAKQFYNAHETTAVEEFSIVLL 1399
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 145/220 (65%), Gaps = 20/220 (9%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
++ R +LP+ FK+ + + +D QVV+I GETGCGK+TQVP F+LEH S+G+ CKI C
Sbjct: 678 MLNSRMQLPMWGFKNEVLAAIDREQVVIICGETGCGKSTQVPSFILEHQLSQGKPCKIYC 737
Query: 241 TQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A R+S E GE D +GY IRLES K + +V+ T G+++R+
Sbjct: 738 TEPRRISAISLARRVSEELGERKNDLGTSRSLVGYAIRLESNTSKETRLVYATTGIVMRM 797
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L E SN D+ +THI++DE+HER SDF+L ++R +L L+++L
Sbjct: 798 L---------EGSN-----DLKDITHIVLDEVHERTIDSDFLLIVLRKLLVRRRDLKVVL 843
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
MSAT+DA+RFS+Y G PV+ VPG T+PV YLED + +
Sbjct: 844 MSATVDAERFSKYLDGAPVLTVPGRTFPVTVKYLEDAVEL 883
>gi|195580493|ref|XP_002080070.1| GD21681 [Drosophila simulans]
gi|194192079|gb|EDX05655.1| GD21681 [Drosophila simulans]
Length = 939
Score = 246 bits (628), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 257/487 (52%), Gaps = 34/487 (6%)
Query: 522 LSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL 581
+ +S ++LDK + D+ I L+ IC + +GAILVFLPG++ I++ + +
Sbjct: 380 IRNSYDNRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYN-I 438
Query: 582 LANP------FFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITID 635
L P +RD + PLHS++ S +Q+ VF+RPP G RK+I+ST IAET++TID
Sbjct: 439 LDKPKTPKGQRWRD--HMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTID 496
Query: 636 DVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA 695
DVVYVI+SGR K +YD N+ +L WV+KA+ +QR GRAGR + G CY+L+S+ R
Sbjct: 497 DVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRKGRAGRVRPGTCYNLFSRARED 556
Query: 696 SLPDFQVPEIKRIPIEELCLQVKLL---DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDI 752
+ D PEI R +E + L +KLL DP FLQ ++ P I+ + +L+ I
Sbjct: 557 LMDDIPTPEILRSKLESIILSLKLLHIGDPY----RFLQTLINAPNPEAIKIGVELLKRI 612
Query: 753 GALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISP 812
AL +T LG L L + P M KM+ + L CLDP + A A ++ PF P+
Sbjct: 613 EALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLG- 671
Query: 813 NEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLL 872
++ R K +A +SD L V +++++ E FC F+SS + L
Sbjct: 672 -KESRVDEIKRRMAR--NMRSDHLLVHNTIIAYRDSRYSHAERDFCYNNFLSSMTLQQLE 728
Query: 873 GMRKQLQTELIKNGFIP----EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KN 926
M+ Q L F+ +D +S + ++P ++ A++ AGLYP +A LR +N
Sbjct: 729 RMKNQFSELLYNYKFLASPKCQDAASNKSSEKIP-LLRAIIGAGLYPNMAHLRKSRQIRN 787
Query: 927 GRRFVETAG---GAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGP 983
R + T G +V HP S+N S + D VY + + + + + T+V P
Sbjct: 788 RVRAIHTMATDDGRRVNFHPSSVN---SGESGFDSAYFVYFQRQKS-TDLFLLDSTMVFP 843
Query: 984 LPLLLLA 990
+ L++
Sbjct: 844 MALIIFG 850
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/255 (42%), Positives = 160/255 (62%), Gaps = 23/255 (9%)
Query: 142 KTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTV 201
K R +D + PK+ + +++E ++E++A R + R KLP + D I V
Sbjct: 110 KERNANLD-WINPKLDER---LQLELEQRQLEENAKKRLVA--RRKLPTMKYADDIIQAV 163
Query: 202 DSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVER 259
NQV+LI G TGCGKTTQVPQ LL+ S+G +C+IVCTQPRRISA ++AE +S ER
Sbjct: 164 RENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIVCTQPRRISAIAIAEWVSYER 223
Query: 260 GENIGDNIGYKIRLES-KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSAL 318
E++G+++GY+IRLES K + +SI +CT GVLL+ L S + + +L
Sbjct: 224 CESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPL--------------MHSL 269
Query: 319 THIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPG 378
+ +I+DEIHER +D ++ +++ +LP P L++ILMSAT+ F YF CP+ ++ G
Sbjct: 270 SVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEG 329
Query: 379 FTYPVKSFYLEDVLS 393
+PVK YLED+LS
Sbjct: 330 VMFPVKMLYLEDILS 344
>gi|353244079|emb|CCA75534.1| related to ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 1361
Score = 246 bits (628), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 249/484 (51%), Gaps = 34/484 (7%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF------FRDTSKFVII 596
I + L+ + + SEDG +LVFLPGW+ I + L+ + F D+SK+ I
Sbjct: 701 IPVPLVALSIAHVLKKSEDGHVLVFLPGWDTIQSLQKTLIHSGMPLLGLNFSDSSKYSIH 760
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
LHS VP +Q+ +F+ PG R+IIL+TNIAET++TI DVVYV+D+G++KE+ YDP +
Sbjct: 761 LLHSTVPIAEQQAIFEPAAPGIRRIILATNIAETSVTIPDVVYVVDTGKVKEQRYDPERH 820
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQ 716
+S+L S+WV ++ QRAGRAGR + G Y L S R A L +Q EIKR+ + + +
Sbjct: 821 ISSLVSAWVGSSNLNQRAGRAGRHRPGEYYGLVSSARMAKLNPYQTVEIKRVDLSNVVMH 880
Query: 717 VKLLD-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
+K L+ P +E+ L +T++PP + AI L+ +GAL + +T LG L + +
Sbjct: 881 IKALNFPGLEVEEVLAQTIEPPTPERVGAAIENLKMVGALDERKCLTSLGRVLLQIPIDV 940
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
+ ++L + CLDPALTLA RD F P P KK A AA+ E S +SD
Sbjct: 941 QLGRLLMYGSFFRCLDPALTLAAIMSNRDAFNNP--PLLKKEAKAAR-EFWSPQNFRSDV 997
Query: 836 LAVIAAFECWKNAKQRGQEA---WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
LA + A+ W + + GQ A FC++ F+S V+ + ++ L L + G +
Sbjct: 998 LATLRAYYAWWDLQGSGQFAAANTFCNEQFLSKPVLLQIQNLKGHLLHSLARAGVLSVSG 1057
Query: 893 SSCSHNARVPGIIHAVLMAGL--YPMVARL----RPPHKNGR---RFVETAGGAKVRLHP 943
+ R P + L A PM+A L P+ R + + TA V + P
Sbjct: 1058 GGVEVDGRFPREVPPELNANADSLPMLAALVAIGSQPNFAIRVTEKLLRTAQERNVLVFP 1117
Query: 944 HSLNFKLSFKKTD------DCPLMVYDEITR------GDGGMHVRNCTVVGPLPLLLLAT 991
S+N + K D D L + E R + G +R CT + P+ LL
Sbjct: 1118 GSVNNRTKESKADSGGGFVDKQLFAFAEKVRNVSSGSANSGTFIRGCTQLDPMTYLLFGA 1177
Query: 992 EIAV 995
AV
Sbjct: 1178 YNAV 1181
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 126/221 (57%), Gaps = 18/221 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQ 242
R LP+ + + VD+N V + TG GKTTQVPQ +L+ +GE C ++CTQ
Sbjct: 426 RESLPVYTKIKELLDVVDANDVTICMAATGSGKTTQVPQLILDQWIDRGEGARCNVICTQ 485
Query: 243 PRRISATSVAERISVERGENIG-DNIGYKIRLESKGG-KHSSIVFCTNGVLLRLLVSQGV 300
PRRI+A SVA+R++ ERGE +G +IGY++R +SK H S+ FCT G+ L +
Sbjct: 486 PRRIAAISVAQRVANERGEALGRGSIGYQVRFDSKVPLDHGSVTFCTTGIFLNRM----- 540
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH----LRLILMS 356
+ E + +TH+IVDE+HERD D L +I+ ML +++ILMS
Sbjct: 541 QKALEMAKHDGPRQFDEVTHVIVDEVHERDVDIDLTLMVIKRMLADRKARGIPIKVILMS 600
Query: 357 ATLDADRFSQYFGG-----CPVIQVPGFTYPVKSFYLEDVL 392
AT+D F QYF PV ++PG YPV+ LE+VL
Sbjct: 601 ATIDPTLFQQYFAAADGTLAPVSEIPGRAYPVQKKLLEEVL 641
>gi|326432581|gb|EGD78151.1| hypothetical protein PTSG_09027 [Salpingoeca sp. ATCC 50818]
Length = 1264
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 215/390 (55%), Gaps = 24/390 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
ID LI +++ I +DGAIL+F+PG +I + + + R T+ +PLHS +
Sbjct: 736 IDYQLIADIVQYILQHGDDGAILIFMPGMGEITRAIKTINSKCGGRVTA----MPLHSSL 791
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
+ +Q ++F + P G RK+I+STNIAET+IT+DDV +VIDSG+MKE YD + L
Sbjct: 792 TAQEQARIFSKAPSGMRKVIVSTNIAETSITVDDVTHVIDSGKMKENRYDAGAGMELLVE 851
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
+WVS+ASA+QR GRAGR + G CY +S+ R A + D Q PE+ R+P+E LCL +K +
Sbjct: 852 TWVSRASAQQRRGRAGRVKPGTCYRCFSRRRFAKMADQQAPEVLRVPLEHLCLHIKSIG- 910
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
++ FL LD P + T+ A+ +L DIGAL +T LG L + ++K++
Sbjct: 911 YADVTKFLSGFLDSPDASTVDQALSLLHDIGALDAHGHITALGHHLAQFPLGTRLAKLIL 970
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F ++ C+DP +T+A Y+ F P+ ++ A +F+ + SD + ++ AF
Sbjct: 971 FGAILKCVDPVVTIAACIGYKPIFVSPMDRRDEANAAKERFKTCA-----SDHITIVNAF 1025
Query: 843 ----ECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN 898
E + +RG A FCS F+S + ++ +R Q + L + GF P +
Sbjct: 1026 NAAVEVLQTEGRRGFMA-FCSDNFLSHKTIMEVIDLRVQYYSVLQELGFAPSERQHKKDK 1084
Query: 899 ARVPG---------IIHAVLMAGLYPMVAR 919
PG ++ A + AGLYP V R
Sbjct: 1085 IGPPGMNVHSGDEDVVMAAVFAGLYPNVVR 1114
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 78/116 (67%), Gaps = 14/116 (12%)
Query: 281 SSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII 340
+ ++FCT GVLLR L S PA + +++HI VDE+HER SD +LA +
Sbjct: 591 TRLLFCTTGVLLRQLQSD-----------PA---IHSISHIFVDEVHERSLDSDVLLARL 636
Query: 341 RDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
RD+L L+++LMSATLDA +FS YFGG PVIQ+PGFT+PVK YLED+ + ++
Sbjct: 637 RDVLRRRKDLKVVLMSATLDAAKFSNYFGGAPVIQIPGFTHPVKEVYLEDIYATVR 692
>gi|358401307|gb|EHK50613.1| hypothetical protein TRIATDRAFT_53057 [Trichoderma atroviride IMI
206040]
Length = 1350
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 224/402 (55%), Gaps = 24/402 (5%)
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
++ D G IL+FLPG +IN+ + L R + ++PLH+ + + +QK+VF
Sbjct: 837 ELSYDKNSGGILIFLPGVGEINQACNSL------RAINSLHVLPLHASLETREQKRVFSS 890
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PPG RK++++TN+AET+ITIDD+V VIDSG++KE S+DP NN+ L+ +W S+A+ KQR
Sbjct: 891 APPGKRKVVVATNVAETSITIDDIVAVIDSGKVKETSFDPQNNMRKLEETWASRAACKQR 950
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGR QAG CY LY+Q ++ PEI+R+P+E+LCL V+ + ++ FL ++
Sbjct: 951 QGRAGRVQAGKCYKLYTQNLEQNMAPRPEPEIRRVPLEQLCLSVRAMGMK-DVVRFLGRS 1009
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
PP + I A+ +L+ +GAL DE +T +G++L L K++ F + CLD
Sbjct: 1010 PTPPETPAIEGAMTLLRRMGALDGDE-LTAMGQQLAMLPADLRCGKLMVFGAIFGCLDDC 1068
Query: 794 LTLACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKN-AKQR 851
+T+A R PF ISP EK+ +A A+ Y G D L + AF W + R
Sbjct: 1069 VTIAAILSTRSPF---ISPKEKRDQAREARIR---FYRGDGDLLTDLEAFNQWDEMMRDR 1122
Query: 852 G----QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHA 907
G Q FC F+S ++ + R Q L + GF P S + N + ++ A
Sbjct: 1123 GTPQRQIRGFCEDNFLSFQTLSDISNTRTQYYDALREIGFSPSSSSQATGNTQNSLLLRA 1182
Query: 908 VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
++ + P +AR++ P K +F + GA V L P + K
Sbjct: 1183 LIASAFTPQIARIQYPDK---KFASSMSGA-VELDPEARAIK 1220
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 146/235 (62%), Gaps = 21/235 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R +++ + +++V +R LP +D I TV+ N V +ISGETG GK+TQ QFLL+ ++
Sbjct: 568 RRQENPSQKKMVTKRQALPAWQMQDAIIRTVNQNHVTIISGETGSGKSTQSVQFLLDDLY 627
Query: 231 SKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTN 288
KG ++ TQPRRISA +A+R++ ER +G +GY IR ES+ + + I F T
Sbjct: 628 EKGLGGCANMIVTQPRRISALGLADRVAEERCSRVGGEVGYAIRGESRQSRDTRITFVTT 687
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSA----LTHIIVDEIHERDRYSDFMLAIIRD-M 343
GVLLR L + G R+ DDV A ++HII+DE+HER +DF+L ++R+ M
Sbjct: 688 GVLLRRLQTSG-GRV---------DDVVASLADVSHIIIDEVHERSLDTDFLLNLLREVM 737
Query: 344 LPSYPHLRLILMSATLDADRFSQYF--GGCPV--IQVPGFTYPVKSFYLEDVLSI 394
+ L+LILMSATLDA F YF G V +++ G T+PV+ ++L+DV+ +
Sbjct: 738 IKKKDMLKLILMSATLDAATFKTYFETEGLSVGSVEISGRTFPVEEYHLDDVVRM 792
>gi|406696886|gb|EKD00157.1| ATP-dependent DEAH-box family RNA helicase, Prp16p [Trichosporon
asahii var. asahii CBS 8904]
Length = 1344
Score = 246 bits (627), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 219/391 (56%), Gaps = 28/391 (7%)
Query: 547 LIEQLLRKICMDSE-----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
LI +LL +IC + + A LVF+PG +I K D L ++P F + FVI PLHS
Sbjct: 845 LIIRLLERICFEDDQLARYSAASLVFMPGLAEIRKLNDMLQSHPKFGASGDFVIYPLHST 904
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
V S Q VF PP G RKI++STNIAET +TI D+ VIDSG+ +E YD +S L
Sbjct: 905 VSSEGQSAVFNIPPRGVRKIVISTNIAETGVTIPDITCVIDSGKQREMRYDEKRQLSKLV 964
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEELCLQVKLL 720
+++++++AKQR GRAGR Q G+ YHL+++ R L + VPE+ R+ +++L L+ K+L
Sbjct: 965 ETYIARSNAKQRRGRAGRVQEGLAYHLFTKARHDMQLAEHPVPEMLRLSLQDLALRTKIL 1024
Query: 721 DPNC--NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
I+D L K LDPP S I+ A+ L ++ AL+ E +T +G L L + +
Sbjct: 1025 KVKLGDTIDDVLTKALDPPSSTNIQRAVQSLVEVKALTPTEDITPMGRLLSKLPMEVHLG 1084
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K+L FA L CLDPALT+ + + PF P + +A AAK S G SD L +
Sbjct: 1085 KVLLFAALFKCLDPALTIVATLNSKSPFITPF--GFEAQAEAAK---KSFVVGNSDFLTI 1139
Query: 839 IAAFECWKNAKQ-RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTE-----LIKNGF----- 887
+ F+ W+ A + R FC + ++S + + +R+QL E + GF
Sbjct: 1140 VNVFDSWRRAAENRNFVRTFCQRNYLSHTNLQQIEELRQQLLAEDERKTIASRGFYTTFA 1199
Query: 888 -IPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
+P ++++ ++N I+ A L +GLYP V
Sbjct: 1200 QVPSELNANANNT---PILEAALASGLYPKV 1227
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 149/235 (63%), Gaps = 24/235 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+++++ R LPI+SF+D I TVD +QV++ SGETGCGK+TQ+P ++LE+ S+G C I
Sbjct: 563 QRMLKARRTLPIASFRDEILRTVDRSQVLVFSGETGCGKSTQLPAYILENELSQGRPCNI 622
Query: 239 VCTQPRRISATSVAERISVERGENIG------DNIGYKIRLESKGGKHSSIVFCTNGVLL 292
+ T+PRRISA S+A+R+S E G+ G +GY IRLESK + + F TNG+ L
Sbjct: 623 IVTEPRRISAISLAQRVSAELGDPPGVMGSKSSLVGYSIRLESKVSSSTRLTFMTNGIAL 682
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
RLL S + +THI+VDE+HER SDF+L ++R++L +++
Sbjct: 683 RLLESGTA--------------LDGITHIVVDEVHERSIESDFLLIVLRELLKVRKDIKV 728
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSAS 407
+LMSAT+DAD+ S YF GC + VPG TYPV YLED + A H+D +S
Sbjct: 729 VLMSATVDADKLSTYFNGCQSMTVPGRTYPVNVNYLEDAV----EACGWHIDESS 779
>gi|348581698|ref|XP_003476614.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Cavia
porcellus]
Length = 916
Score = 246 bits (627), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 163/219 (74%), Gaps = 2/219 (0%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ E+GAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 457 LEMMDDDKVDLNLIAALIRYIVLEEEEGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFI 515
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D
Sbjct: 516 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQ 575
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 576 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 635
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIG 753
LQ+K+L I FL + +DPP + + +I L ++G
Sbjct: 636 LQIKILRLG-RIAYFLSRLMDPPSNDAVLLSIRHLMELG 673
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 159/239 (66%), Gaps = 22/239 (9%)
Query: 166 ESLTSRIEKDANLRQIVEE---RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVP 222
+ L ++K R+ +E R KLP + + +D +QV ++SGETGCGKTTQV
Sbjct: 177 QQLLEDLQKKKTDRRYIEMQRFREKLPSYGMQKELVDLIDKHQVTVVSGETGCGKTTQVT 236
Query: 223 QFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-G 277
QF+L++ KG C+IVCTQPRRISA SVAER++ ER E+ G+ + GY+IRL+S+
Sbjct: 237 QFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLP 296
Query: 278 GKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFML 337
K SI++CT G++L+ L S +S+++HI++DEIHER+ SD ++
Sbjct: 297 RKQGSILYCTTGIILQWLQSDP--------------HLSSVSHIVLDEIHERNLQSDVLM 342
Query: 338 AIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+I+D+L S L++ILMSATL+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 343 TVIKDLLNSRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 401
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 15/168 (8%)
Query: 845 WKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHN 898
W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+ P+D + N
Sbjct: 674 WEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVSSRNPKD-PKANIN 732
Query: 899 ARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTD 956
+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++TD
Sbjct: 733 SDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKTDGLVSIHPKSVN----VEQTD 788
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDD 1004
+ + +++ +CT V P LL +I++ DNE +
Sbjct: 789 FHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISI--QKDNEQE 834
>gi|345325475|ref|XP_001515991.2| PREDICTED: ATP-dependent RNA helicase A [Ornithorhynchus anatinus]
Length = 1332
Score = 245 bits (626), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 249/470 (52%), Gaps = 24/470 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 636 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYR 694
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYV+DS + K K + +
Sbjct: 695 ILPLHSQIPREEQRKVFDSVPAGVTKVILSTNIAETSITINDVVYVLDSCKQKVKLFTAH 754
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 755 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 814
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 815 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDTNDELTPLGRILAKLPIE 873
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D T++ A+ + +PF NE KR A SD
Sbjct: 874 PRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----NEGKRLGYVHRNFAG--SRFSD 926
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 927 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 985
Query: 892 VSSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+ + N P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 986 LLTQVFNNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1040
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVA 996
S + P V+ E R + ++ T+V PL LLL A++ V+
Sbjct: 1041 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKSMTLVSPLQLLLFASKKVVS 1089
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 154/230 (66%), Gaps = 19/230 (8%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL- 226
L ++E+D +L+ I+EER LP+ F+ I + N VV+I G TGCGKTTQVPQF+L
Sbjct: 380 LMYQLEQDRDLKAILEEREMLPVKKFEKEILEAIHHNSVVIIRGATGCGKTTQVPQFILD 439
Query: 227 EHIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIV 284
E IW+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES + H+S++
Sbjct: 440 ECIWNNRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPHASVM 499
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT GVLLR L + + ++H+IVDEIHERD +DF+L ++RD++
Sbjct: 500 FCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDFLLVVLRDVV 543
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 544 QAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 593
>gi|405123662|gb|AFR98426.1| nuclear DNA helicase II [Cryptococcus neoformans var. grubii H99]
Length = 1615
Score = 245 bits (626), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 144/355 (40%), Positives = 205/355 (57%), Gaps = 13/355 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF------FRDTSKFVII 596
I L+ + + S+DG +LVFLPGWE+I K D LLA + FRD+ +F I
Sbjct: 890 IPYPLVALTIAFVLSRSDDGHVLVFLPGWEEIKKVADILLAGRYPLLGMDFRDSRRFSIH 949
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
LHS +P+ +QK+VF+ PPPG R+IIL+TNIAET+ITI DVVYV+D+GR+KEK YDP +
Sbjct: 950 YLHSTIPAAEQKEVFRTPPPGVRRIILATNIAETSITIPDVVYVVDTGRVKEKRYDPERH 1009
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQ 716
+S+L S+WV ++ QRAGRAGR + G Y L SQ R SL Q+ E+KR + + +
Sbjct: 1010 MSSLVSAWVGSSNLNQRAGRAGRHREGEYYGLVSQRRLDSLEAHQMVEMKRSDLSNVVMH 1069
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
VK L+ +++ L T++PP I A+ VL+ +GAL + +T LG L L V
Sbjct: 1070 VKALNLG-EVQEVLAATIEPPEPSRIVAAMEVLRMLGALDARQNLTSLGRVLLQLPVDAN 1128
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
+ K+ + CLD ALTLA RDPF P P +K +A + K S +SD L
Sbjct: 1129 VGKLCLYGAFFRCLDAALTLAAVLTNRDPFLAP--PAQKAKADSIKDRF-SPKAFRSDPL 1185
Query: 837 AVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
A++AA+ W ++ G FC F+S + + +++ L L K G I
Sbjct: 1186 AIVAAYNQWLPYEESGDFYSATKFCDNNFLSKATLLQIKQVKQSLLQSLDKAGVI 1240
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 142/249 (57%), Gaps = 28/249 (11%)
Query: 160 EIAMKVESLTSRI---EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
E+ K + L +R+ E D + ++ R+ LP+ S I T+ N V +I TG G
Sbjct: 619 EMYYKSQELQARLAAYESDPRMARMRRTRASLPVYSRASDILRTIRENDVTIIMAATGSG 678
Query: 217 KTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
KTTQVPQ L + + +G C IVCTQPRR++A SVAERI+ ERG+ IG +GY++R +
Sbjct: 679 KTTQVPQLLFDEMIKQGLGGGCNIVCTQPRRLAAMSVAERIAEERGQMIGQEVGYQVRFD 738
Query: 275 SK-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
++ + SI FCT G+ L+ + S L E +N A + ++HI+VDE+HE +
Sbjct: 739 AQLPEANGSITFCTTGIFLKRMQSA----LGENANDVAVQRMDQVSHIVVDEVHEHRK-- 792
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF-----GGCPVIQVPGFTYPVKSFYL 388
R +P ++++LMSAT+D F YF PV ++PG TYPV+ F+L
Sbjct: 793 -------RRGVP----IKVVLMSATIDPTLFQSYFIDAQGAYAPVAEIPGRTYPVEKFFL 841
Query: 389 EDVLSILKS 397
+ ++ L+S
Sbjct: 842 DKIVPQLQS 850
>gi|345488714|ref|XP_003425968.1| PREDICTED: dosage compensation regulator-like isoform 2 [Nasonia
vitripennis]
Length = 1076
Score = 245 bits (626), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 238/456 (52%), Gaps = 20/456 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
I LIE LLR I + GA+L+FLPGW I L +P F +VIIPLHS +
Sbjct: 454 ISFELIESLLRYIKDQNIPGAVLIFLPGWNLIFALMKHLQQHPLFGGVD-YVIIPLHSQL 512
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P Q+KVF PPG KIIL+TNIAET+ITIDDVVYVIDS + K K + +NN++ +
Sbjct: 513 PREDQRKVFDPVPPGKTKIILTTNIAETSITIDDVVYVIDSCKAKMKLFTSHNNMTNYAT 572
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL L +KLL
Sbjct: 573 VWASKTNLEQRKGRAGRVRPGFCFHLCSKARYERMDEHMTPEMFRTPLHELALSIKLLRL 632
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+I FL K ++PP + A ++L+++ L ++++T LG+ L L + P + KM+
Sbjct: 633 G-SIGQFLSKAIEPPPIDAVIEAEVMLREMKCLDKNDELTPLGKILARLPIEPRLGKMMI 691
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ D AL+ A+ P + P E +R T + A SD +A++ F
Sbjct: 692 LGCMFRVGD-ALSTMAANSSTFPEVYNMGP-EMRRLTPQQRAFAG--ARYSDHVAMLHVF 747
Query: 843 ECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNAR 900
+CW+ A+ G+ E FC VS + + + QLQ LI GF E + N +
Sbjct: 748 QCWEEARTGGEYAENAFCDSKNVSLPTLRVTWEAKHQLQALLISAGFPEETLCPTPLNYQ 807
Query: 901 VPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKT 955
I A+L GLYP V HK R+ + T A + +H S+N +F++
Sbjct: 808 AGADPRLDTITALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVNCS-NFEQN 861
Query: 956 DDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
P V+ E R + + T+V PL LLL +
Sbjct: 862 FPYPFFVFGEKIRTR-AVSCKQMTMVSPLHLLLFGS 896
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 151/229 (65%), Gaps = 19/229 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R+++ L+ R+KLP+ + K I ++ N V++I G TGCGKTTQV QF+L+
Sbjct: 189 RMQQSNELQMSNVNRAKLPVFAKKHEIMDAINENPVIIIRGNTGCGKTTQVCQFILDDYI 248
Query: 231 SKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
S G+ C I TQPRRISA SVA+RI+VER E +G ++GY +R ES + ++SI+FCT
Sbjct: 249 STGQGAYCSIAVTQPRRISAVSVADRIAVERCEPLGQSVGYSVRFESCLPRPYASIMFCT 308
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+ Y
Sbjct: 309 VGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHMY 352
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
P LR+ILMSAT+D FS+YFG CPVI++PG YPV+ ++LED + + K
Sbjct: 353 PDLRIILMSATIDTSLFSKYFGDCPVIEIPGRAYPVQQYFLEDCIEMTK 401
>gi|410931708|ref|XP_003979237.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A-like,
partial [Takifugu rubripes]
Length = 1004
Score = 245 bits (626), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 242/466 (51%), Gaps = 24/466 (5%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
+ +A +N + L+E LL+ I GA+L+FLPGW I + L NP F +++
Sbjct: 357 RSMALINEKETSFELVEALLKYIESLQVAGAVLIFLPGWNLIYSMQRHLETNPHF-GSNR 415
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+ I+PLHS +P +Q++VF+ P K+ILSTNIAET+ITI+DVVYVIDS + K K +
Sbjct: 416 YRILPLHSQIPREEQRRVFESVPDNITKVILSTNIAETSITINDVVYVIDSCKQKVKLFT 475
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEE 712
+NN++ + W SK + +QR GRAGR + G C+HL S+ R L PEI R P+ E
Sbjct: 476 SHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLESHMTPEIFRTPLHE 535
Query: 713 LCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLS 772
+ L +KLL I FL K ++PP + A L+++ AL +E++T LG L L
Sbjct: 536 VALSIKLLRLGA-IGHFLSKAIEPPPLDAVIEAEYTLKELDALDSNEELTPLGRILARLP 594
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
+ P + KM+ + D T++ AS + +PF NE KR A
Sbjct: 595 IEPRLGKMMILGCIFHVGDAMCTVSAASCFPEPFI-----NEGKRLGFVHRNFAG--SRF 647
Query: 833 SDQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
SD +A+++AF+ W + + G+EA FC ++ + M + QL+ L+ +GF PE
Sbjct: 648 SDHVALLSAFQAWDDVRLIGEEAEIAFCEHKRLNVSTLRMTWEAKVQLKEILVNSGF-PE 706
Query: 891 DVSSCSHNARVPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
D V ++ ++L G YP V HK RR + T G A + +H S
Sbjct: 707 DCLMPQMFTTVGADNNLDVVVSLLTFGSYPNVCF----HKEKRRILTTEGRAAL-IHKSS 761
Query: 946 LNFKL-SFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N S T P V+ E R + + T+V PL LLL A
Sbjct: 762 VNCPFSSHDMTYPSPFFVFSEKIRTR-AISAKGMTLVSPLQLLLFA 806
Score = 226 bits (576), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 168/253 (66%), Gaps = 22/253 (8%)
Query: 145 GKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSN 204
G V + C P+ ++ + L +++ D NL++++ ER +LP+ F++VI ST++S+
Sbjct: 85 GVAVPLPCTPEQLSKDLH---DELMCQLDHDDNLQKMLVERDQLPVKQFEEVILSTINSH 141
Query: 205 QVVLISGETGCGKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGEN 262
VVLI G TGCGKTTQVPQF+L+ G C IV TQPRRISA SVAER++ ERGE+
Sbjct: 142 PVVLIRGATGCGKTTQVPQFILDSFIKGGRASDCNIVVTQPRRISAVSVAERVAYERGED 201
Query: 263 IGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHI 321
+G + GY +R ES + H+SI+FCT GVLLR L + + ++H+
Sbjct: 202 LGKSCGYSVRFESVLPRPHASILFCTVGVLLRKL----------------EAGIRGISHV 245
Query: 322 IVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTY 381
IVDEIHERD +DF++ ++RD++ +YP +R+ILMSAT+D F +YF CP+I+V G T+
Sbjct: 246 IVDEIHERDINTDFLIVVLRDVIQAYPEVRVILMSATIDTTMFREYFFNCPIIEVFGRTF 305
Query: 382 PVKSFYLEDVLSI 394
PV+ ++LED + +
Sbjct: 306 PVQEYFLEDCIQM 318
>gi|401881148|gb|EJT45452.1| ATP-dependent DEAH-box family RNA helicase, Prp16p [Trichosporon
asahii var. asahii CBS 2479]
Length = 1353
Score = 245 bits (626), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 219/391 (56%), Gaps = 28/391 (7%)
Query: 547 LIEQLLRKICMDSE-----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
LI +LL +IC + + A LVF+PG +I K D L ++P F + FVI PLHS
Sbjct: 854 LIIRLLERICFEDDQLARYSAASLVFMPGLAEIRKLNDMLQSHPKFGASGDFVIYPLHST 913
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
V S Q VF PP G RKI++STNIAET +TI D+ VIDSG+ +E YD +S L
Sbjct: 914 VSSEGQSAVFNIPPRGVRKIVISTNIAETGVTIPDITCVIDSGKQREMRYDEKRQLSKLV 973
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEELCLQVKLL 720
+++++++AKQR GRAGR Q G+ YHL+++ R L + VPE+ R+ +++L L+ K+L
Sbjct: 974 ETYIARSNAKQRRGRAGRVQEGLAYHLFTKARHDMQLAEHPVPEMLRLSLQDLALRTKIL 1033
Query: 721 DPNC--NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
I+D L K LDPP S I+ A+ L ++ AL+ E +T +G L L + +
Sbjct: 1034 KVKLGDTIDDVLTKALDPPSSTNIQRAVQCLVEVKALTPTEDITPMGRLLSKLPMEVHLG 1093
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K+L FA L CLDPALT+ + + PF P + +A AAK S G SD L +
Sbjct: 1094 KVLLFAALFKCLDPALTIVATLNSKSPFITPF--GFEAQAEAAK---KSFVVGNSDFLTI 1148
Query: 839 IAAFECWKNAKQ-RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTE-----LIKNGF----- 887
+ F+ W+ A + R FC + ++S + + +R+QL E + GF
Sbjct: 1149 VNVFDSWRRAAENRNFVRTFCQRNYLSHTNLQQIEELRQQLLAEDERKTIASRGFYTTFA 1208
Query: 888 -IPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
+P ++++ ++N I+ A L +GLYP V
Sbjct: 1209 QVPSELNANANNT---PILEAALASGLYPKV 1236
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 149/235 (63%), Gaps = 24/235 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+++++ R LPI+SF+D I TVD +QV++ SGETGCGK+TQ+P ++LE+ S+G C I
Sbjct: 572 QRMLKARRTLPIASFRDEILRTVDRSQVLVFSGETGCGKSTQLPAYILENELSQGRPCNI 631
Query: 239 VCTQPRRISATSVAERISVERGENIG------DNIGYKIRLESKGGKHSSIVFCTNGVLL 292
+ T+PRRISA S+A+R+S E G+ G +GY IRLESK + + F TNG+ L
Sbjct: 632 IVTEPRRISAISLAQRVSAELGDPPGVMGSKSSLVGYSIRLESKVSSSTRLTFMTNGIAL 691
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
RLL S + +THI+VDE+HER SDF+L ++R++L +++
Sbjct: 692 RLLESGTA--------------LDGITHIVVDEVHERSIESDFLLIVLRELLKVRKDIKV 737
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSAS 407
+LMSAT+DAD+ S YF GC + VPG TYPV YLED + A H+D +S
Sbjct: 738 VLMSATVDADKLSTYFNGCQSMTVPGRTYPVNVNYLEDAV----EACGWHIDESS 788
>gi|336370299|gb|EGN98639.1| hypothetical protein SERLA73DRAFT_107710 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1391
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 254/513 (49%), Gaps = 69/513 (13%)
Query: 526 MKQQLLDKYLATVN---PELIDLVLIEQLLRKICMDSE-----DGAILVFLPGWEDINKT 577
++++ + +AT+N LI LI +LL ++C + + A+LVF+PG +I +
Sbjct: 820 LEKRYSSQTIATMNLFDERLIPYDLIIRLLERLCFEDDALHPFSSAVLVFMPGLGEIRRL 879
Query: 578 RDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDV 637
D L + F D S F I LHS + S Q +VF+ PPPG RKI+++TNIAET ITI D+
Sbjct: 880 NDLLSEHRLFGDDSSFTIYHLHSTLSSESQNRVFEIPPPGVRKIVIATNIAETGITIPDI 939
Query: 638 VYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-AS 696
VID+G+ +E +D +S L ++V+K++A QR GRAGR Q+G+CYHL+++ R
Sbjct: 940 TCVIDTGKHREMRFDEKRQISRLVETFVAKSNAAQRRGRAGRVQSGLCYHLFTKTRHDTQ 999
Query: 697 LPDFQVPEIKRIPIEELCLQVKLLDPN--CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGA 754
L + +PE+ R+ + +L L++K++ N +IE+ L + +DPPVSV ++ AI L ++ A
Sbjct: 1000 LAENPLPEMMRLSLSDLALRIKIMKVNLGSSIEEVLSQAMDPPVSVNVQRAISALVEVRA 1059
Query: 755 LSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNE 814
L+ E +T +G L L + K L A L CLDPALT+A A + + PF P +
Sbjct: 1060 LTPSEDITPMGRLLSKLPTEVHLGKFLLTAALFRCLDPALTIAAALNSKSPFVTPFGMEQ 1119
Query: 815 KKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR-GQEAWFCSQYFVSSGVMNMLLG 873
+ F + SD L + AF W+ A G FC +F+S + +
Sbjct: 1120 EADIAKKTFRTEN-----SDFLTIHNAFASWRRASSNAGFVHKFCRTHFLSHQNLQQIEE 1174
Query: 874 MRKQLQTELIKNGFIPEDVS----------------------SCSHNARVPGIIHAVLMA 911
+R+Q L+ + FI D S S N+ +++A L A
Sbjct: 1175 LRQQFLGYLVDSSFIEVDKSFVRELSRARYGRNRPRFVTVPPSLDSNSYNTALVNAALAA 1234
Query: 912 GLYPMVARLRPPHKNGRRFVETAGGAKV-------RLHPHSLNFKLSFKKTDDCPLMVYD 964
GLYP + V++ G K HP S+NF KK D +
Sbjct: 1235 GLYPKILT-----------VDSTGQMKTISNNQPSAFHPSSINFG---KKATDFGVNYLS 1280
Query: 965 EITRGDGGMHVRNCTV--VGP---LPLLLLATE 992
T MH R GP + LLLL E
Sbjct: 1281 YFTL----MHSRKLYAWETGPVDDISLLLLCGE 1309
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 173/275 (62%), Gaps = 19/275 (6%)
Query: 129 GEKLDANQSRKSDKTRGKRVDIFCKP--KMSKAEIAMKVESLTSRIEK---DANLRQIVE 183
G+K D+N ++ +DK+ K ++ P + A + L + E + ++
Sbjct: 500 GKKFDSN-TKSNDKSAKKTGNLVIGPTARHYHASYNATSDQLVAEFEARQGSTAYQAMLS 558
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQP 243
R++LPI+ +++ ITS ++ +QV+++SGETGCGK+TQVP F+LE S+G+ CKI CT+P
Sbjct: 559 HRNQLPIAKYREEITSALEYSQVLVLSGETGCGKSTQVPAFILEDQLSQGKPCKIYCTEP 618
Query: 244 RRISATSVAERISVERGENIG------DNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
RRISA S+A+R+S+E G+ G +GY IRLES +++ + F TNG+ LR+L S
Sbjct: 619 RRISALSLAQRVSLELGDAPGAVGTMSSLVGYSIRLESNTCRNTRLAFVTNGIALRMLES 678
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+ A D++ TH+I+DE+HER SDF+L +++ +L L++ILMSA
Sbjct: 679 GSGQGGQGM----AFDEI---THLIIDEVHERTIESDFLLIVLKSLLAQKSDLKIILMSA 731
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
T+D ++ S++FGGCP Q+PG T+PV YLED +
Sbjct: 732 TMDVEKISKFFGGCPSFQIPGRTFPVDVRYLEDAV 766
>gi|395824901|ref|XP_003785689.1| PREDICTED: ATP-dependent RNA helicase A [Otolemur garnettii]
Length = 1271
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 246/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 625 MAQLNEKETPFELIESLLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHF-GSHRYQ 683
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF+ P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 684 ILPLHSQIPREEQRKVFEPVPIGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 743
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 744 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 803
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 804 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 862
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D T++ A+ + +PF NE KR A SD
Sbjct: 863 PRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----NEGKRLGYVHRNFAG--NRFSD 915
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC +S + M + QL+ LI +GF PED
Sbjct: 916 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLSMATLRMTWEAKVQLKEILINSGF-PEDC 974
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 975 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1029
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1030 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1074
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M ++S L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 360 QISMDLKSELMYQLEQDQDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 419
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 420 TQVPQFILDEFIQTDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 479
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 480 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 523
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++ ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 524 LMVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQM 582
>gi|58262180|ref|XP_568500.1| hypothetical protein CNM01980 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134118507|ref|XP_772027.1| hypothetical protein CNBM1850 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254633|gb|EAL17380.1| hypothetical protein CNBM1850 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230673|gb|AAW46983.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1581
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/355 (40%), Positives = 204/355 (57%), Gaps = 13/355 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF------FRDTSKFVII 596
I L+ + + S DG +LVFLPGWE+I K D LLA + FRD+ +F I
Sbjct: 907 IPYPLVALTIAFVLSRSGDGHVLVFLPGWEEIRKVADILLAGRYPLLGMDFRDSRRFSIH 966
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
LHS +P+ +QK+VF+ PPPG R+IIL+TNIAET+ITI DVVYV+D+GR+KEK YDP +
Sbjct: 967 YLHSTIPAAEQKEVFRTPPPGVRRIILATNIAETSITIPDVVYVVDTGRVKEKRYDPERH 1026
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQ 716
+S+L S+WV ++ QRAGRAGR + G Y L SQ R SL Q+ E+KR + + +
Sbjct: 1027 MSSLVSAWVGSSNLNQRAGRAGRHREGEYYGLVSQRRLDSLEAHQMVEMKRSDLSNVVMH 1086
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
VK L+ +++ L T++PP I A+ VL+ +GAL + +T LG L L V
Sbjct: 1087 VKALNLG-EVQEVLAATIEPPEPSRIVAAMEVLRMLGALDARQNLTSLGRVLLQLPVDAN 1145
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
+ K+ + CLD ALTLA RDPF P P +K +A + K S +SD L
Sbjct: 1146 VGKLCLYGAFFRCLDAALTLAAVLTNRDPFLAP--PAQKAKADSIKDRF-SPKAFRSDPL 1202
Query: 837 AVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
A++AA+ W ++ G FC F+S + + +++ L L K G I
Sbjct: 1203 AIVAAYNQWLPYEESGDFYSATRFCDNNFLSKATLLQIKQVKQSLLQSLDKAGVI 1257
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 149/257 (57%), Gaps = 27/257 (10%)
Query: 160 EIAMKVESLTSRI---EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
E+ K + L +R+ E D + ++ R+ LP+ S + T+ N V +I TG G
Sbjct: 619 EMYYKSQELQARLAAYESDPRMARMRRTRASLPVYSRASEMLRTIRENDVTIIMAATGSG 678
Query: 217 KTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
KTTQVPQ L + + +G C IVCTQPRR++A SVAERI+ ERG+ IG +GY++R +
Sbjct: 679 KTTQVPQLLFDEMIKQGLGGGCNIVCTQPRRLAAMSVAERIAEERGQMIGQEVGYQVRFD 738
Query: 275 SK-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
++ + SI FCT G+ L+ + S L E ++ A + ++HI+VDE+HERD +
Sbjct: 739 AQLPEANGSITFCTTGIFLKRMQSA----LGENADDVAVQRMDLVSHIVVDEVHERDIDT 794
Query: 334 DFMLAII--------RDMLPSYPHLRLILMSATLDADRFSQYF-----GGCPVIQVPGFT 380
D +L ++ R +P ++++LMSAT+D F YF PV ++PG T
Sbjct: 795 DLLLVVLKRLLQDRKRRGVP----IKVVLMSATIDPTLFQSYFTDAQGAPAPVAEIPGRT 850
Query: 381 YPVKSFYLEDVLSILKS 397
YPV+ F+L+ ++ L+S
Sbjct: 851 YPVEKFFLDKIIPQLQS 867
>gi|219120481|ref|XP_002180978.1| helicase_2 [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407694|gb|EEC47630.1| helicase_2 [Phaeodactylum tricornutum CCAP 1055/1]
Length = 790
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 260/536 (48%), Gaps = 69/536 (12%)
Query: 512 QIIKKHMENALSDSMKQQLLDKYLATVNPEL------IDLVLIEQLLRKICM-------- 557
II++H AL ++ + +++T E I+ LIE LL + +
Sbjct: 207 HIIEEHSRYALRQYDARETVSMWVSTKGGERKRQTSQINYDLIEDLLEFVLLKNGTTQAL 266
Query: 558 ------DSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVF 611
D +GA+L+FLPG +I +RL ++ F D F I+PLHS++ S +Q++ F
Sbjct: 267 SPPEGVDISNGALLIFLPGVGEIKALSERLRSSRMFGDARWFTIVPLHSLLSSAEQRRAF 326
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
++P G R IILSTNIAET++TI DVV V+DSGR++E Y+ L ++W SKASAK
Sbjct: 327 EKPLNGRRNIILSTNIAETSVTIPDVVCVLDSGRVREVHYEKRTATRKLVATWCSKASAK 386
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQV-PEIKRIPIEELCLQVKLLDPNCNIEDFL 730
QRAGRAGR Q G+C L+S L + PEI+RIP+EE+CL + DFL
Sbjct: 387 QRAGRAGRVQPGLCLKLFSSLTEQNNMRLATEPEIRRIPLEEVCLNILASGFAVKCSDFL 446
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGAL-----SLDEKVTELGEKLGCLSVHPLMSKMLFFAI 785
T +PP + A+ VLQ+I AL +L E++T LG L L V + KM+ F
Sbjct: 447 SLTPEPPDPDNVNAALQVLQNIKALTYSDSTLSERLTPLGNHLSRLPVDVRLGKMMVFGT 506
Query: 786 LMDCLDPALTLACA-SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
L C+D T+ A S + PF + + + +A + F + +SD L ++ +E
Sbjct: 507 LFRCIDTIATIVAALSASKSPFVMSLQDAHQAKAAHSSF-----HHPKSDFLTLLNVWEA 561
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE-------------- 890
+ + + FC F+S V+ + R Q L+ G +
Sbjct: 562 FNKCDTQSKSRQFCQDNFLSFAVLREMGDARIQYLELLVGIGLLDRVKAGYDNQSRRFDS 621
Query: 891 ---DVSSCSHNARVPGIIHAVLMAGLYPMVAR--LRPP------HKNGRRFVETAGGAKV 939
S + N R I+H V+ AGLYP VAR L P HK R FV
Sbjct: 622 RLSAKSQYNRNGRKESIVHTVICAGLYPNVARVHLTPQGDQTIWHKQERLFV-------- 673
Query: 940 RLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
H S+N K S ++ C + +++ G+ + + V PL LLL EI V
Sbjct: 674 --HSSSVNAKAS-RQLPICWMGYHEKFGTGN-RVSISTTFFVHPLALLLFGGEIVV 725
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 147/227 (64%), Gaps = 23/227 (10%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKI 238
+++ERS LPI SF+D + T+ N V ++ ETG GKTTQ PQ++LE + ++G+T I
Sbjct: 1 MLKERSALPIFSFRDELLRTIRVNPVTVVCAETGAGKTTQCPQYILEEALLGARGDTTTI 60
Query: 239 VCTQPRRISATSVAERISVERGEN-IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
+C+QPRR++A SVAER+S E E+ +G +GY+IRLES+ + ++FCT GV+LR LV
Sbjct: 61 LCSQPRRVAAISVAERVSDEMCEDSVGRLVGYQIRLESRRSSETRLLFCTTGVILRRLVE 120
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP-SYPHLRLILMS 356
+ ++H+IVDE+HER D +L +R +L + L+++LMS
Sbjct: 121 D--------------PTLKGISHVIVDEVHERQWQIDVLLVSLRALLQGTRSDLKVVLMS 166
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHL 403
ATLDAD F +FGG P++ VPG T+PV +++LED+L +NH+
Sbjct: 167 ATLDADLFRSFFGGAPLVTVPGRTFPVATYHLEDILE-----ATNHI 208
>gi|393240248|gb|EJD47775.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1322
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 253/482 (52%), Gaps = 47/482 (9%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF-------FRDTSKFVIIPLHS 600
I +LRK S DG +LVFLPGWE+I + R+L++P F D +K+ I+ LHS
Sbjct: 691 IAHVLRK----SNDGHVLVFLPGWEEIQSVQ-RILSDPMKPLLDISFLDRTKYQILILHS 745
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+P +Q++VF+ P PG R+IILSTNIAET++TI DVVYV+D+ R+KE ++P ++S+L
Sbjct: 746 SIPVAEQQQVFEPPSPGVRRIILSTNIAETSVTIPDVVYVVDAARVKELRFEPERHISSL 805
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
S+WV ++ QRAGRAGR + G Y + SQ A L +Q E+ R + + + VK L
Sbjct: 806 VSAWVGASNLNQRAGRAGRHRPGEYYGVLSQAHADRLSPYQTVEMLRTDLSNVVMHVKAL 865
Query: 721 D-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
+ PN ++ED L T++PP + A+ L+ +GAL D+ +T LG L L + +M +
Sbjct: 866 NFPNLDVEDVLAATIEPPDPERVEAALEHLRMVGALDKDKNLTSLGHVLLQLPIEAVMGR 925
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
++ F CLD ALTLA RDPF PI +KK A A K + + +SD LAV+
Sbjct: 926 LILFGAFFRCLDRALTLAAIMTNRDPFMTPIL--QKKEAQARK-DSWTPNDFRSDPLAVL 982
Query: 840 AAFECWKNAKQRGQEA---WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS 896
A+E W + RG+ + FC F+S + M+ ++ L L G I +
Sbjct: 983 RAYETWWGYQSRGEYSTANQFCFDNFLSKPTLTMIQKIKGHLLQNLYTAGVIDVAIGRVD 1042
Query: 897 HNARVPGIIHAV----------------LMAGLYPMVARLRPPHKNGRRFVETAGGAKVR 940
A +P + L+A L + ++ + + G R + T
Sbjct: 1043 PAAPMPAGLRRSDQFVPQELNENNNSRPLLAALIAVASQPKFAVRTGERTLRTQREKATF 1102
Query: 941 LHPHSLNF--KLSFKKTDDCPLM--VY------DEITRGDG--GMHVRNCTVVGPLPLLL 988
+HP S+N + S + TD+ + +Y +T G+ M++ + T + PL +L
Sbjct: 1103 IHPSSVNHVTRESREMTDESTYLKDIYAFAEKRQNLTTGEARPQMYLMSTTKLDPLTYVL 1162
Query: 989 LA 990
Sbjct: 1163 FG 1164
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 140/239 (58%), Gaps = 17/239 (7%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE 234
D L +I +R LP+ + + +++ N+V + TG GKTTQ+PQ +L+ +KG+
Sbjct: 387 DPVLEKIRAQRQSLPVYTQASELLRSIEENEVTICMAATGSGKTTQIPQIILDDWIAKGQ 446
Query: 235 --TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVL 291
C I+CTQPRR++A SVA+R++ ERGE G +IGY++R E+ + H + FCT G+
Sbjct: 447 GSRCNILCTQPRRLAAISVADRVAKERGEPTGKSIGYQVRFEANLPEMHGCVTFCTTGIF 506
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-- 349
LR + Q ++ + + DDV TH+IVDE HERD +D L +++ +L
Sbjct: 507 LRRM--QSALEAQDLNRGASLDDV---THVIVDEAHERDVDTDLTLMVLKRLLADRRARG 561
Query: 350 --LRLILMSATLDADRFSQYFGG-----CPVIQVPGFTYPVKSFYLEDVLSILKSAESN 401
++++LMSAT+D F YF P++ +PG ++PV+ +L+ L L++A N
Sbjct: 562 IPIKVVLMSATIDPTIFQNYFSTEVGEPAPLVSIPGRSFPVQKHFLDSFLPDLRNAAQN 620
>gi|1082769|pir||A47363 RNA helicase A - human
Length = 1279
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 245/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 623 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 681
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 682 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 741
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR AG C+HL S+ R L PE+ R P+ E+
Sbjct: 742 NNMTNYSTVWASKTNLEQRKGRAGRSTAGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 801
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 802 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 860
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 861 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 913
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 914 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 972
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 973 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1027
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + + P V+ E R + + T+V PL LLL A++
Sbjct: 1028 CPFSSQDMNYPSPFFVFGEKIRTR-AISAKGMTLVPPLQLLLFASK 1072
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 155/239 (64%), Gaps = 21/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD + F
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTSF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP +++ TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPSLKL-WRTYPVQEYFLEDCIQM 580
>gi|391348429|ref|XP_003748450.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Metaseiulus
occidentalis]
Length = 935
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 247/469 (52%), Gaps = 29/469 (6%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ ++ +D L+ ++ IC DGAILVF+PGWE I++ +L P + +
Sbjct: 386 LSKISAAKVDCSLVVACVQHICATKGDGAILVFMPGWEGISEVCRKLSECPAI-NRGNPI 444
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD-P 653
I+PLHSM+P+ Q++VF PP G RKII+ST I+ET++TI+DVV+V+DSG+ K K+ D
Sbjct: 445 ILPLHSMLPTEDQRRVFDVPPEGVRKIIVSTIISETSVTIEDVVFVVDSGKTKIKTIDVG 504
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+N++ L W+SKA+A+QR GRAGR +AG CY LY+++ ++ +Q PE+ R +E L
Sbjct: 505 KDNLNCLSEQWISKANARQRLGRAGRVRAGECYKLYTKMDYENMEQYQQPEMVRSSLENL 564
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
L VK L+ E+FL + + PP S I N+ L + AL KVT LG+ L L
Sbjct: 565 ILYVKELELG-EPEEFLPQCISPPSSEAIANSKQFLIQLKALDKHSKVTALGKYLASLPT 623
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
P + KML L C D ++ A D+++PF P+ + A +KF G +S
Sbjct: 624 EPRLGKMLLLGKLFGCEDAVTSICAALDFKEPFVTPLGKRQNVDAVRSKFA----DGSRS 679
Query: 834 DQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS 893
D + V A + A RG+ + F+S M ML +RKQ + L E
Sbjct: 680 DHVMVANAIQ---YALDRGEAHY--RDKFLSFLTMRMLKNLRKQYKQHL------KEQKL 728
Query: 894 SCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKV----------RLHP 943
S +H + AV+ GLYP +A R P N + T G ++ R+
Sbjct: 729 SGAHPNFSLETLRAVICGGLYPGIAMARCPATNSKCRYPTGGSVRLARTLFSKSESRICF 788
Query: 944 HSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
HS + LS + + Y RGD G+ + + T V PL LL+ A E
Sbjct: 789 HSKSV-LSRETESNTLFFAYFLKQRGDNGVALFDATAVHPLSLLIFAAE 836
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 141/222 (63%), Gaps = 21/222 (9%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKI 238
I R KLP+ + + T+ NQV +ISGETG GKTTQVPQF+L+ ++C I
Sbjct: 142 IKASRVKLPVFKARAEVLRTISENQVTIISGETGSGKTTQVPQFILDQFLEDETRKSCFI 201
Query: 239 VCTQPRRISATSVAERISVERGENIGDN-IGYKIRLESKGGKHSS--IVFCTNGVLLRLL 295
CTQPRRISA SVAER++ ERGE IG+N +GYKIRLESK + SS I+FCT G++L+ L
Sbjct: 202 ACTQPRRISAISVAERVAEERGELIGENSVGYKIRLESKEPRGSSGKILFCTTGIILQFL 261
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR-DMLPSYPHLRLIL 354
S + + +TH+IVDE+HER SD +LA++R ++LP P L++I
Sbjct: 262 QSDPL--------------LGNITHLIVDEVHERSIDSDLLLAVLRQNILPKRPDLKVIC 307
Query: 355 MSATLDADRFSQYFG-GCPVIQVPGFTYPVKSFYLEDVLSIL 395
MSATLD+ F YFG C + V G +P++ +LE+ L L
Sbjct: 308 MSATLDSSTFVGYFGEACRSVSVDGKLFPIQERFLEEFLETL 349
>gi|440632415|gb|ELR02334.1| hypothetical protein GMDG_05401 [Geomyces destructans 20631-21]
Length = 1380
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 229/421 (54%), Gaps = 34/421 (8%)
Query: 543 IDLVLIEQLLRKI----CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ LI Q +R I + G IL+FLPG +IN+T D L + P +PL
Sbjct: 850 INYDLIGQTVRAIDAELTHKKQTGGILIFLPGVVEINRTLDNLRSIP------NLHALPL 903
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + SV+Q++VF G RK+I +TN+AET+ITIDD+V VID+GR+KE SYDP NN+
Sbjct: 904 HASLQSVEQRRVFPHASSGKRKVICATNVAETSITIDDIVAVIDTGRVKETSYDPSNNMR 963
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ----LRAASLPDFQVPEIKRIPIEELC 714
L+ W S+A+ KQR GRAGR QAG CY LY++ + A P+ PEI+R+P+E+LC
Sbjct: 964 KLEEVWASRAACKQRRGRAGRVQAGKCYKLYTRNAELTKMAERPE---PEIRRVPLEQLC 1020
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L V+ + + FL L PP S+ + AI +L +GAL D+ +T LG L +
Sbjct: 1021 LSVRAMGIK-EVAAFLASALTPPESLAVDGAIDLLGRMGALDGDD-LTALGRHLSMIPSD 1078
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
K++ + + CLD ++ +A + PF P E+ +A AKF G Q D
Sbjct: 1079 LRCGKLMVYGAMFGCLDASVIIAAILTLKSPFVSPQEKREESKAARAKFS-----GNQGD 1133
Query: 835 QLAVIAAFECW-----KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP 889
+ + AFE W + ++G+ +C F+S ++ + R Q + L + GFIP
Sbjct: 1134 LIGDLHAFEQWDEMMSNRSIRQGEVRNWCGDNFLSFQTLSDIASNRTQYLSSLREIGFIP 1193
Query: 890 EDVSSC-SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
VS+ +HN+ ++ +++ P +AR+ P K +F ++ GA V L P +
Sbjct: 1194 YRVSATLNHNSSNVALLRSLIAGAFNPQLARIDFPDK---KFAQSVSGA-VELDPEARTI 1249
Query: 949 K 949
K
Sbjct: 1250 K 1250
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 147/233 (63%), Gaps = 19/233 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R + DA L+ + +R LP ++ I TV+S+QV +ISGETG GK+TQ QF+L+ ++
Sbjct: 592 RRQTDAKLQARIADRRTLPAWEMREDIIDTVNSHQVTIISGETGSGKSTQSAQFILDDLY 651
Query: 231 SK--GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTN 288
+ GET KI+CTQPRRISA +A+R+S ER +G +GY IR ESK + I F T
Sbjct: 652 GRALGETAKIICTQPRRISALGLADRVSDERCGVVGQEVGYIIRGESKSSPRTKITFVTT 711
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSA----LTHIIVDEIHERDRYSDFMLAIIRDML 344
GVLLR L + G S DDV A ++H+I+DE+HER +DF+L ++RD+L
Sbjct: 712 GVLLRRLQTSGGS----------SDDVVASLADISHVIIDEVHERSLDTDFLLVLLRDVL 761
Query: 345 PSYPHLRLILMSATLDADRFSQYF---GGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+LILMSATLDA F YF G I++ G TYPV+ +YL+DV+ +
Sbjct: 762 RKRKDLKLILMSATLDAGVFESYFRSDGKVGRIEISGRTYPVEDYYLDDVIRM 814
>gi|1806048|emb|CAA71668.1| nuclear DNA helicase II [Homo sapiens]
Length = 1270
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR AG C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYSTVWASKTNLEQRKGRAGRSTAGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVPPLQLLLFASK 1073
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|417414426|gb|JAA53507.1| Putative deah-box rna helicase, partial [Desmodus rotundus]
Length = 1204
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 243/465 (52%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 625 MAQLNEKETSFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKYLEMNPHF-GSQRYQ 683
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 684 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 743
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 744 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 803
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 804 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 862
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF NE KR A SD
Sbjct: 863 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----NEGKRLGYIHRNFAG--SRFSD 915
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF E +
Sbjct: 916 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECL 975
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ N P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 976 LTQVFNNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNC 1030
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1031 PFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1074
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 157/239 (65%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++++D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 360 QISMDLKNELMYQLDQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 419
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 420 TQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 479
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 480 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 523
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F YF CP+I+V G T+PV+ ++LED + +
Sbjct: 524 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCDYFFSCPIIEVYGRTFPVQEYFLEDCIQM 582
>gi|443689623|gb|ELT91988.1| hypothetical protein CAPTEDRAFT_154310 [Capitella teleta]
Length = 889
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/334 (40%), Positives = 206/334 (61%), Gaps = 8/334 (2%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ ++ D+ L L+ IC +GAILVF+PGW +I KT++ L + +
Sbjct: 542 LSKMDFTFADVDLTVSLVVHICRHKPEGAILVFMPGWMEIKKTKEELEK---VLSAANTL 598
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+ QK+VF RP G RKII++T+IAET+ITIDD+VYV++SG+ K K +DP
Sbjct: 599 IIPLHSLLPTCNQKEVFNRPRQGVRKIIIATSIAETSITIDDIVYVVNSGKSKMKDFDPE 658
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
+N++TLQ++W+S+ASA+QR GRAGR Q G CYHLY++ L D+++PE+ R +E+LC
Sbjct: 659 SNIATLQTAWLSRASARQRRGRAGRVQPGECYHLYTRHHEKQLRDYELPEMLRTRLEKLC 718
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +K+L I F+ K + PP +++A +L D+ AL +E +T LG L + +
Sbjct: 719 LDIKMLKLG-RIVPFISKAMQPPSMDALQSAANMLLDLNALDDNEDLTPLGYHLATMPLE 777
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KML F + CL+P LT+A + ++D F P+ + AA+ LA G +SD
Sbjct: 778 PQTGKMLLFGAMFSCLNPILTIAASLSFKDAFYKPMDYDPS--WVAARRSLAD--GCKSD 833
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVM 868
+ + AFE W+ A G FC ++F+ +
Sbjct: 834 HILIAKAFEAWEQACANGNGHQFCRRHFLQQNTL 867
Score = 196 bits (498), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 141/202 (69%), Gaps = 20/202 (9%)
Query: 197 ITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCTQPRRISATSVAER 254
I T++ NQVV+ISG+TGCGKTTQV QF+L+ +G C IVCTQPRRISA SVAER
Sbjct: 301 IVDTINKNQVVVISGDTGCGKTTQVAQFILDDYIQCGRGSNCHIVCTQPRRISAISVAER 360
Query: 255 ISVERGENIG---DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKP 310
++ ER E G ++GY+IRLE++ K SI++CT G++LR ++ G S L
Sbjct: 361 VAQERVEKCGAGTSSVGYQIRLENQLPRKRGSILYCTTGIVLRHMM--GDSWL------- 411
Query: 311 AKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG 370
+ +H+I+DEIHERD +SDF++ I++D++ L++ILMSATL+A+ FS YF
Sbjct: 412 -----AGTSHVILDEIHERDLHSDFLMIILKDLMRIRSDLKVILMSATLNAEMFSAYFDN 466
Query: 371 CPVIQVPGFTYPVKSFYLEDVL 392
CP++ +PGFT+ V+ FYLED++
Sbjct: 467 CPMLHIPGFTFHVEEFYLEDIV 488
>gi|413952303|gb|AFW84952.1| hypothetical protein ZEAMMB73_244337 [Zea mays]
Length = 325
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 158/323 (48%), Positives = 194/323 (60%), Gaps = 31/323 (9%)
Query: 903 GIIHAVLMAGLYPMVARLRPPHKNGRRFV-ETAGGAKVRLHPHSLNFKLSFKKTDDCPLM 961
GI+ AVLMAG YPMV ++ PP KN R+ V ETA GAKVRLHPHS NF LSF K+ PL+
Sbjct: 25 GIMRAVLMAGAYPMVGKMLPPRKNARKSVLETASGAKVRLHPHSCNFNLSFSKSSGNPLL 84
Query: 962 VYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESD 1021
+YDEITRGDGGM+++N +VVG PLLL+A E+ VAP DDD+DE+E D
Sbjct: 85 IYDEITRGDGGMYIKNSSVVGSYPLLLIAAEMVVAPP-------------DDDSDEDEED 131
Query: 1022 EDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFK 1081
E ++ T QH E +MSSPD V+VVVDRWL F +TALD+AQIYCLRERL+ AILFK
Sbjct: 132 SSEDEAEESTLVQHKEEIMSSPDSIVSVVVDRWLRFDATALDVAQIYCLRERLASAILFK 191
Query: 1082 VTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVESLTSMIQATEIDKCPAARNRG 1141
V HPQ LPP L ASMYA+ ILS+DG + P + + S E K R G
Sbjct: 192 VKHPQDVLPPALGASMYAITCILSFDGLPSMVPPNDLSANRGSGQDLAEASKFSQGRRAG 251
Query: 1142 TGQNPSNFLMSLMSPNTRQYFPLRDHKSRIPAHKGSTKGNQLSTQVAQPPL--FHGS--P 1197
PS FLMSL++ T ++ + H G G T+ ++ P+ F S P
Sbjct: 252 Y-IPPSGFLMSLLADRTHNAPSFQNSSN----HPG---GGSAHTRPSRAPVGRFDRSRRP 303
Query: 1198 VVGSGSGTHIPPGPRGDSFKRPR 1220
SG GT P SFKR R
Sbjct: 304 FRNSGPGTSAP-----RSFKRQR 321
>gi|321265267|ref|XP_003197350.1| DEAH RNA helicase [Cryptococcus gattii WM276]
gi|317463829|gb|ADV25563.1| DEAH RNA helicase, putative [Cryptococcus gattii WM276]
Length = 1571
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 203/355 (57%), Gaps = 13/355 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF------FRDTSKFVII 596
I L+ + + SEDG +LVFLPGWE+I K D LL + FRD +F I
Sbjct: 897 IPYPLVALTIAFVLSRSEDGHVLVFLPGWEEIKKVADILLTGRYPLLGMDFRDPRRFSIH 956
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
LHS +P+ +QK+VF+ PPPG R+IIL+TNIAET++TI DVVYV+D+GR+KEK YDP +
Sbjct: 957 YLHSTIPAAEQKEVFRTPPPGVRRIILATNIAETSVTIPDVVYVVDTGRVKEKRYDPERH 1016
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQ 716
+S+L S+WV ++ QRAGRAGR + G Y L SQ R SL Q+ E+KR + + +
Sbjct: 1017 MSSLVSAWVGSSNLNQRAGRAGRHREGEYYGLVSQRRLDSLEAHQMVEMKRSDLSNVVMH 1076
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
VK L+ +++ L T++PP I A+ VL+ +GAL + +T LG L L V
Sbjct: 1077 VKALNLG-EVQEVLAATIEPPEPSRIVAAMEVLRMLGALDARQNLTSLGRVLLQLPVDAN 1135
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
+ K+ + CLD ALTLA RDPF P P +K +A + K S +SD L
Sbjct: 1136 VGKLCLYGAFFRCLDAALTLAAVLTNRDPFLAP--PAQKAKADSIKDRF-SPKAFRSDPL 1192
Query: 837 AVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
A++AA+ W ++ G FC F+S + + +++ L L K G I
Sbjct: 1193 AIVAAYNQWLPYEESGDFYSATKFCDNNFLSKPTLLQIKQVKQSLLQSLDKAGVI 1247
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 150/257 (58%), Gaps = 27/257 (10%)
Query: 160 EIAMKVESLTSRI---EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
EI K + L +R+ E D + ++ R+ LP+ S + + T+ N V +I TG G
Sbjct: 609 EIYYKSQELQARLAAYESDPRMARMRRTRASLPVYSRANEMLRTIRDNDVTIIMAATGSG 668
Query: 217 KTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
KTTQVPQ L + + +G C IVCTQPRR++A SVAERI+ ERG+ IG +GY++R +
Sbjct: 669 KTTQVPQLLFDEMIKEGSGGGCNIVCTQPRRLAAMSVAERIAEERGQMIGQEVGYQVRFD 728
Query: 275 SK-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
++ + SI FCT G+ L+ + S L E +N+ A + ++H++VDE+HERD +
Sbjct: 729 AQLPEANGSITFCTTGIFLKRMQSA----LGENANEVAVQRMDQVSHVVVDEVHERDIDT 784
Query: 334 DFMLAII--------RDMLPSYPHLRLILMSATLDADRFSQYF-----GGCPVIQVPGFT 380
D +L ++ R +P ++++LMSAT+D F YF PV ++PG T
Sbjct: 785 DLLLVVLKRLLQDRKRRGVP----IKVVLMSATIDPTLFQSYFTDARGAHAPVAEIPGRT 840
Query: 381 YPVKSFYLEDVLSILKS 397
+PV+ +L+ ++ L++
Sbjct: 841 FPVEKSFLDKIVPQLQN 857
>gi|358389780|gb|EHK27372.1| hypothetical protein TRIVIDRAFT_73272 [Trichoderma virens Gv29-8]
Length = 1348
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 230/416 (55%), Gaps = 28/416 (6%)
Query: 543 IDLVLIEQLLRKI----CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ LI + ++ I + + G IL+FLPG +IN+ + L R S ++PL
Sbjct: 822 INYSLIAEAVKAIDYELSYEKKSGGILIFLPGVGEINQACNNL------RSISSLHVLPL 875
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + + +QK+VF PPPG RK++++TN+AET+ITIDD+V VIDSG++KE S+DP NN+
Sbjct: 876 HASLETKEQKRVFTSPPPGKRKVVVATNVAETSITIDDIVVVIDSGKVKETSFDPQNNMR 935
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
L+ +W S+A+ KQR GRAGR QAG C+ L++Q ++ PEI+R+P+E+LCL V+
Sbjct: 936 KLEETWASRAACKQRQGRAGRVQAGKCFKLFTQNLEQNMAPRPEPEIRRVPLEQLCLSVR 995
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
+ ++ FL ++ PP + I A+++L+ +GAL DE +T +G++L L
Sbjct: 996 AMGMK-DVIRFLGRSPTPPETPAIEGAMMLLRRMGALDGDE-LTAMGQQLAMLPADLRCG 1053
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K++ F + CLD +T+A R PF P ++ R +F Y G D L
Sbjct: 1054 KLMVFGAIFGCLDDCITIAAILSTRSPFFAPQEKRDEAREARMRF-----YTGDGDLLTD 1108
Query: 839 IAAFECWKN-AKQRG----QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS 893
+ AF W + + RG Q FC + F+S + + R Q L + G + S
Sbjct: 1109 LEAFNQWDDMMRDRGTPQRQIRGFCDENFLSFQTLTDISNTRSQYYDALTEIGIVSP--S 1166
Query: 894 SCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
S + AR ++ A++ + P +AR++ P K +F + GA V L P + K
Sbjct: 1167 SHASGARNALLLRALVASAFTPQIARIQYPDK---KFASSMSGA-VELDPEARAIK 1218
Score = 166 bits (419), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 144/235 (61%), Gaps = 21/235 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R + + + + ++ +R LP +D I TV+ N V +ISGETG GK+TQ QFLL+ ++
Sbjct: 568 RRQGNPSQKDMITKRQALPAWQMQDAIVQTVNKNHVTIISGETGSGKSTQSVQFLLDDLY 627
Query: 231 SKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTN 288
+G ++ TQPRRISA +A+R++ ER +G +GY IR ES+ + + I F T
Sbjct: 628 ERGLGGCANMIVTQPRRISALGLADRVAEERCSRVGGEVGYAIRGESRQSRDTRITFVTT 687
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSA----LTHIIVDEIHERDRYSDFMLAIIRD-M 343
GVLLR L + G R+ DDV A ++HII+DE+HER +DF+L ++R+ +
Sbjct: 688 GVLLRRLQTSG-GRV---------DDVVASLADVSHIIIDEVHERSLDTDFLLNLLREVI 737
Query: 344 LPSYPHLRLILMSATLDADRFSQYF--GGCPV--IQVPGFTYPVKSFYLEDVLSI 394
+ L+L+LMSATLDA F YF G V +++ G T+PV+ +YL+DV+ +
Sbjct: 738 IKKKDMLKLVLMSATLDAATFVSYFETEGLSVGAVEISGRTFPVEEYYLDDVVRM 792
>gi|449508002|ref|XP_002191685.2| PREDICTED: ATP-dependent RNA helicase A [Taeniopygia guttata]
Length = 1218
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 243/465 (52%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N LIE LL I + GA+LVFLPGW I + L +P F ++
Sbjct: 601 MAQLNERETSFELIEALLIYIRTLNVPGAVLVFLPGWNLIYTMQKHLEMSPRF-GGHQYR 659
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS VP +Q++VF PPG K+ILST+IAET+ITI+DVV+VIDS + K K + +
Sbjct: 660 ILPLHSQVPLEEQRRVFDPVPPGVTKVILSTSIAETSITINDVVFVIDSCKQKVKLFTAH 719
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR +AG C+HL S+ R L PE+ R P+ E+
Sbjct: 720 NNMTNYATVWASKTNLEQRKGRAGRVRAGFCFHLCSRARFERLQTHMTPEMFRTPLHEIA 779
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 780 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAERTLRELDALDSNDELTPLGRILAKLPIE 838
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D T++ A+ + +PF NE KR A SD
Sbjct: 839 PRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----NEGKRLGYVHRNFAGTR--YSD 891
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC +S + M + QL+ LI +GF E +
Sbjct: 892 HVALLSVFQAWDDARMGGEEAEKRFCEHKRLSMATLRMTWEAKVQLKDILISSGFPEECL 951
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ N P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 952 MTQPFNNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGHNAL-IHKSSVNC 1006
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1007 PFSSQDIKYPSPFFVFGEKIRTR-AISAKTMTLVSPLQLLLFASK 1050
Score = 183 bits (464), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 136/229 (59%), Gaps = 41/229 (17%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL-EHI 229
R+E+D L++I E R LP+ +F+ I + N VV+I G TGCGKTTQVPQ++L E+I
Sbjct: 370 RLEQDQELQRIQEAREALPLKNFESEILDAIHHNSVVVIRGATGCGKTTQVPQYILDEYI 429
Query: 230 WS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+ + C IV TQPRRISA SVAER+S ERGE G + GY +R ES + H+SI+FCT
Sbjct: 430 RTNRAAECNIVVTQPRRISAVSVAERVSYERGEEPGQSCGYSVRFESVLPRPHASIMFCT 489
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
IHERD +DF+L ++RD++ Y
Sbjct: 490 --------------------------------------IHERDINTDFLLVVLRDVVQVY 511
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
P +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + + +
Sbjct: 512 PEIRVVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQDYFLEDCIQMTQ 560
>gi|157864924|ref|XP_001681170.1| putative RNA helicase [Leishmania major strain Friedlin]
gi|68124465|emb|CAJ02307.1| putative RNA helicase [Leishmania major strain Friedlin]
Length = 1234
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 165/501 (32%), Positives = 257/501 (51%), Gaps = 58/501 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKI-CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
LA +N ++I+ LIE ++ I GA+LVFLPG +I + ++L NP R
Sbjct: 584 LARMNYDVINYELIEYIVEYIDTALRAPGAVLVFLPGMAEIQRCLEQLKLNP--RLAKSC 641
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+ LHS + S +Q+ VF+RPP G RK+IL TNI ET+ITIDD VYVID+G+ KE Y+
Sbjct: 642 LFYNLHSSLGSSEQQGVFRRPPAGKRKVILGTNIMETSITIDDAVYVIDTGKAKENRYNA 701
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
++S L + +SKA+ +QR GRAGR Q G C+ L+++ + + D Q+ E+ R+P+E L
Sbjct: 702 RKSLSELVTVNISKANCRQRQGRAGRVQEGFCFRLFTEAQFEAFDDHQLCEMHRVPLESL 761
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ+ L +E +LQK L PP I +++ VL +GAL++++++T LG+ L L +
Sbjct: 762 ILQIYALHLGDEVE-YLQKALTPPEERAIHSSVKVLTTLGALTVEKRLTSLGQHLANLPL 820
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
+ KM+ L+ C+DP LT+A R PF + + F +L S
Sbjct: 821 DVRVGKMIIHGALLQCIDPVLTMAACLATRSPFIASVDFRTEVENMRRAFAGETL----S 876
Query: 834 DQLAVIAAFECWKNAKQR---GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
DQL+ A+ W + Q+ G C Y++S + + ++Q + L + GF+
Sbjct: 877 DQLSSWFAYNKWASVLQQKGSGAARKACEDYYLSPATLKQIESTKRQYERYLYEAGFL-- 934
Query: 891 DVSSCSH----------------------------NARVPGIIHAVLMAGLYPMVARLRP 922
D + SH N+ I A L+AGLYP VA++R
Sbjct: 935 DNAPRSHMSPSKFIFPPFTTLDDRVFEAGGQHFNENSTSTRCILACLVAGLYPNVAQMRM 994
Query: 923 P---------HKNGRRFVE--TAGGAKVRLHPHSLNFK-LSFKKTDDCPLMVYDEITRGD 970
P + GR V+ T G++ +HP S+ K SF PL+VY + +
Sbjct: 995 PRGSRSVGGGNYGGRHTVKFTTFDGSECLVHPSSVASKETSFAS----PLLVYVDKVKTS 1050
Query: 971 GGMHVRNCTVVGPLPLLLLAT 991
+R +VV PL ++L +
Sbjct: 1051 ATF-LREVSVVAPLHVILFGS 1070
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 149/239 (62%), Gaps = 19/239 (7%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S + + ++S +++ + +LR+ R LP + ++ + + + + V+I GETG
Sbjct: 297 VSDTALDVTLKSSWDKLKTEGSLRK---ARDSLPAHTVRETLRAALQKHNAVVIGGETGS 353
Query: 216 GKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQ+PQFL E + +G + IVCTQPRR++ATSVA R++ ER E +G +GY IRL
Sbjct: 354 GKTTQIPQFLYEFMCEEGHGSSANIVCTQPRRLAATSVALRVAEERDEAVGGTVGYSIRL 413
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
E+ K + I +CT G++LR L + + ++H++VDEIHER +
Sbjct: 414 ENCVSKKTQITYCTTGIVLRRLQTDKY--------------LGRVSHVVVDEIHERGVDT 459
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
DF+L ++RD++ L+++LMSAT+D++ F++YF G PVI + G T+PVK +LE ++
Sbjct: 460 DFLLILLRDLVRRRQDLKVVLMSATMDSELFARYFDGAPVISIAGRTFPVKVMHLEQII 518
>gi|408390204|gb|EKJ69610.1| hypothetical protein FPSE_10206 [Fusarium pseudograminearum CS3096]
Length = 1485
Score = 243 bits (619), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 156/494 (31%), Positives = 246/494 (49%), Gaps = 50/494 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L ++ I+ LI QL+ +I ++ + AILVFLPG +I D LL +P F
Sbjct: 924 LTQIDEYRIEFDLILQLIAQIAINDQLQDFSKAILVFLPGIAEIRTLNDMLLGDPRF--A 981
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 982 KDWLVYPLHSTIATEDQESAFLVPPPGIRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1041
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R L D Q PE+ R+
Sbjct: 1042 FDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTKFRHDQLMSDQQTPEMLRLS 1101
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L LDPP + IR A+ L D+ AL+ E++T LG +L
Sbjct: 1102 LQDLAIRVKICKIG-GIEETLGDALDPPSAKNIRRAVDALVDVRALTQTEELTPLGHQLA 1160
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + ++ CLD A+T A + PF+ P ++ +A A+ +
Sbjct: 1161 RLPLDVFLGKLILYGVIFKCLDMAITTAAILSSKSPFSAPF--GQRTQADNARM---AFR 1215
Query: 830 GGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G SD L + A+ WK Q G+E FC + F+S + + ++ QL T L +
Sbjct: 1216 RGDSDLLTIYNAYLAWKRVCQSAGGGGKEFQFCRKNFLSQQTLANIEDLKGQLLTSLADS 1275
Query: 886 GFIP--EDVSSCSHNARVPG------------------------IIHAVLMAGLYPMVAR 919
GF+ E+ AR G + +V+ YP +
Sbjct: 1276 GFLSLTEEERRALSRARFSGGRGRRQQQFYDIPRRVNLNSDNDVVSASVIAWSFYPKILV 1335
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCT 979
P G R + T + LHP S+N + D + Y I + H T
Sbjct: 1336 RDAPGSKGLRNIGT--NQSISLHPSSVN-----RGRLDLRWLSYYHIMQSRAVYHAHEAT 1388
Query: 980 VVGPLPLLLLATEI 993
V P+ LL ++
Sbjct: 1389 AVEAFPIALLCGDV 1402
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 179/289 (61%), Gaps = 35/289 (12%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
+ +++ R +LP+ F++ + VD NQVV++ GETGCGK+TQVP FLLEH S+G CK
Sbjct: 669 FQTMLQSRMQLPMWHFREQVLEAVDGNQVVIVCGETGCGKSTQVPSFLLEHQLSQGRPCK 728
Query: 238 IVCTQPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVL 291
+ CT+PRRISA S+A R+S E GEN +G N +GY IRLE+ + + +V+ T G++
Sbjct: 729 VYCTEPRRISAISLARRVSEELGENKNDLGTNRSLVGYSIRLEANTSRETRLVYATTGIV 788
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
+R+L E SN D+ +TH+++DE+HER SDF+L +++ +L L+
Sbjct: 789 MRML---------EGSN-----DLQEVTHLVLDEVHERTIDSDFLLIVLKKLLVRRKDLK 834
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVP 411
++LMSAT+DADRFS Y GG PV+ VPG T+PV+ YLED + + A ++ + ++
Sbjct: 835 VVLMSATVDADRFSAYLGGAPVLNVPGRTFPVQVRYLEDAIELTGYAPADS-EPDKMLDL 893
Query: 412 NEDPELTEENKSTLDEAISLAWSND--------------EFDMLLELVS 446
++DP +E + D + SLA + EFD++L+L++
Sbjct: 894 DDDPAESEGENTKSDISKSLASYSSRTKSTLTQIDEYRIEFDLILQLIA 942
>gi|296229583|ref|XP_002760334.1| PREDICTED: ATP-dependent RNA helicase A isoform 2 [Callithrix
jacchus]
Length = 1270
Score = 243 bits (619), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIESLLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 157/239 (65%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHELQGILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDEFIQTDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|407846285|gb|EKG02502.1| RNA helicase, putative [Trypanosoma cruzi]
Length = 1295
Score = 243 bits (619), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 265/493 (53%), Gaps = 53/493 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKI-CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
++ +N ++I+ LIE ++ I + DGA+L+FLPG +I + ++L +NP R ++
Sbjct: 656 ISRMNLDVINYELIESVVFYIDTVMKVDGAVLIFLPGMAEIMRCMEQLKSNP--RLSNSC 713
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
++ LHS + S +Q VF+RPP G RK+++ TNI ET+ITIDD V+VIDSG+ KE YD
Sbjct: 714 LMYNLHSSLGSSEQHGVFQRPPKGKRKVVIGTNIMETSITIDDAVFVIDSGKAKENRYDA 773
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
++S L + VSKA+ +QR GRAGR + G C+ L++ + +L D Q+ E+ R+P+E L
Sbjct: 774 RKSLSQLVTVNVSKANCRQRQGRAGRVREGFCFRLFTSAQFEALDDHQLCEMHRVPLEGL 833
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ+ L+ +E +LQK L PP +R ++ L +GAL+LD+++T LG+ L L +
Sbjct: 834 ILQIYSLNLGDEVE-YLQKALSPPEERAVRGSVRALTTLGALTLDKRLTSLGQHLANLPL 892
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEK----KRATAAKFELASLY 829
+ KM+ ++ C+DP LT+A R PF + + +RA A ++
Sbjct: 893 DVRIGKMIIHGAILHCVDPVLTIAACLAVRSPFLSMMDYQAEVEGVRRAFAGEY------ 946
Query: 830 GGQSDQLAVIAAFECWKNAK-QRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L A+ W + G A C++Y++S + + ++Q + L + G
Sbjct: 947 --MSDHLVSWFAYASWVFVQYNEGSSAAKKLCARYYLSLPALKQIQSTKRQYERYLYEAG 1004
Query: 887 FIPEDVSSCSH-------------------------NARVPGIIHAVLMAGLYPMVARLR 921
FI E SH NA I + ++AGLYP +AR++
Sbjct: 1005 FIEETPIHSSHERFLYDPVITLEDRLYESGGRQFNANAGSVKCILSCVVAGLYPNIARVQ 1064
Query: 922 P-PHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVY-DEITRGDGGMHVRN 977
K G F++ T G++V +HP S+ + +K PL+VY D+I +R+
Sbjct: 1065 TGAGKKGGTFLKLTTFDGSEVMIHPSSV---VGREKKFLSPLLVYVDKIK--TSATFLRD 1119
Query: 978 CTVVGPLPLLLLA 990
+VV PL ++L +
Sbjct: 1120 VSVVTPLHVILFS 1132
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 140/213 (65%), Gaps = 16/213 (7%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQ 242
R +LP ++ + + +QVV+I GETG GKTTQ+PQ+L E + G + IVCTQ
Sbjct: 395 REQLPAFQVREELREIISKHQVVVIGGETGSGKTTQIPQYLYEFMCESGMGGSANIVCTQ 454
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRR++ATSVA R++ ER E +G +GY IRLES + + I +CT G++LR L
Sbjct: 455 PRRLAATSVALRVAEERDEAVGGVVGYTIRLESCVSRRTQITYCTTGIVLRRL------- 507
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
+ + +++HI+VDEIHER +DF+L ++RD++ L+++LMSAT+D++
Sbjct: 508 -------QVEKFLGSVSHIVVDEIHERGVDTDFLLILLRDLIQRRSDLKVVLMSATMDSE 560
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
F++YFGG PVI + G TYPV+ F+LE+++ ++
Sbjct: 561 LFARYFGGAPVISIQGRTYPVQHFHLEEIIPMV 593
>gi|392571642|gb|EIW64814.1| P-loop containing nucleoside triphosphate hydrolase protein [Trametes
versicolor FP-101664 SS1]
Length = 1455
Score = 243 bits (619), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 241/461 (52%), Gaps = 47/461 (10%)
Query: 525 SMKQQLLDKYLATVN---PELIDLVLIEQLLRKICMD-----SEDGAILVFLPGWEDINK 576
+++++ + ++TVN LI LI +LL KIC + S A+LVF+PG +I +
Sbjct: 880 TLEKRFSPETISTVNLLDERLIPYDLIVRLLEKICFEDRSYESYSSAVLVFMPGMGEIRR 939
Query: 577 TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
D L + F +F I PLHS + S QQ VF PPPG RKI+++TNIAET ITI D
Sbjct: 940 LNDVLTEHRSFGSEDRFRIYPLHSTISSEQQGAVFDIPPPGVRKIVIATNIAETGITIPD 999
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR--- 693
+ VID+G+ +E +D +S L +++++++A QR GRAGR Q+G+C+HL+++ R
Sbjct: 1000 ITCVIDTGKHREMRFDEKRQISRLIETYIARSNAAQRRGRAGRVQSGLCFHLFTKARHDT 1059
Query: 694 -AASLPDFQVPEIKRIPIEELCLQVKLLDPN--CNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
A+ PD PEI R+ + +L L++K++ N +IED L + LDPP+ + ++ A+ L
Sbjct: 1060 KMAAHPD---PEIMRLSLSDLALRIKIMKVNLGTSIEDVLSRALDPPLGINVQRAVSALV 1116
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPI 810
++ AL+ +E++T +G L L + K L A L CLDPALT+A + + PF P+
Sbjct: 1117 EVRALTPNEEITPMGRLLSQLPTDVHLGKFLLIATLFRCLDPALTIAATLNSKSPFLTPL 1176
Query: 811 SPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNM 870
++ A AK S SD L + AF W+ A G FC ++S +
Sbjct: 1177 GLEQE--AERAKL---SFRTENSDFLTLHNAFASWRRASGNGIARKFCKSNYLSHQNLQQ 1231
Query: 871 LLGMRKQLQTELIKNGFIPEDVSSCSHNAR------------VPGIIHA----------V 908
+ +R+Q L+ + FI D + +R VP +
Sbjct: 1232 IEELRQQFLGYLVDSSFIHVDRAFVRDLSRARYGRNKTRFVVVPSDLDVNSGNAAMVNAA 1291
Query: 909 LMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
L AGLYP + + P KN R + HP S+NFK
Sbjct: 1292 LAAGLYPKILTV-DPLKNEMRTI--GNNQPASFHPSSVNFK 1329
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 144/222 (64%), Gaps = 13/222 (5%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
++ +R+ LP++ ++ + S ++ +Q++++SGETGCGK+TQVP F+LE KG CKI C
Sbjct: 619 MLHQRNTLPMAHYRQDLLSLLEMSQILVLSGETGCGKSTQVPAFILEDQLLKGRHCKIYC 678
Query: 241 TQPRRISATSVAERISVERGENIG------DNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A+R+S E GE G +GY IRLES + + + + TNG+ LR+
Sbjct: 679 TEPRRISAISLAQRVSRELGEPAGAVGTGSSLVGYAIRLESNITRRTRLAYVTNGIALRM 738
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L + + +THII+DE+HER SDF+L +++ +L P L+++L
Sbjct: 739 LEGGSGQGGQGTA-------FDEITHIIIDEVHERTIESDFLLIVLKSLLVQRPDLKIVL 791
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
MSATLDA++ S YFGGCP++ VPG T+PV +LED + K
Sbjct: 792 MSATLDAEKISAYFGGCPILSVPGRTFPVDVRFLEDAVEFTK 833
>gi|194210388|ref|XP_001489530.2| PREDICTED: ATP-dependent RNA helicase A [Equus caballus]
Length = 1272
Score = 243 bits (619), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 245/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLGA-IGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 862 PRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYVHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESV 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVFGRTYPVQEYFLEDCIQM 581
>gi|401416389|ref|XP_003872689.1| putative RNA helicase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488914|emb|CBZ24163.1| putative RNA helicase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1233
Score = 243 bits (619), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 259/500 (51%), Gaps = 56/500 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE---DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
LA +N ++I+ L E ++ I D+ GA+LVFLPG +I + ++L NP R
Sbjct: 583 LARMNYDVINYELTEYIVEYI--DTALRVPGAVLVFLPGMAEIQRCLEQLKLNP--RLAK 638
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ LHS + S +Q+ VF+RPP G RK+IL TNI ET+ITIDD VYVID+G+ KE Y
Sbjct: 639 SCLFYNLHSSLGSSEQQGVFRRPPAGKRKVILGTNIMETSITIDDAVYVIDTGKAKENRY 698
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ ++S L + +SKA+ +QR GRAGR Q G C+ L+++ + + D Q+ E+ R+P+E
Sbjct: 699 NARKSLSELVTVNISKANCRQRQGRAGRVQEGFCFRLFTEAQFEAFDDHQLCEMHRVPLE 758
Query: 712 ELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
L LQ+ L +E +LQK L PP I +++ VL +GAL+ ++++T LG+ L L
Sbjct: 759 SLILQIYALHLGDEVE-YLQKALTPPEERAIHSSVKVLTTLGALTAEKRLTSLGQHLANL 817
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGG 831
+ + KM+ L+ C+DP LT+A R PF + + F +L
Sbjct: 818 PLDVRVGKMIIHGALLQCIDPVLTIAACLATRSPFIASVDFRTEVENMRRAFAGETL--- 874
Query: 832 QSDQLAVIAAFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
SDQL+ A+ W + +Q+G A C YF+S + + ++Q + L + GF+
Sbjct: 875 -SDQLSSWFAYNKWASVLQQKGTAAARKVCEDYFLSPATLKQIESTKRQYERYLYEAGFL 933
Query: 889 PEDVSS--------------------------CSHNARVPGIIHAVLMAGLYPMVARLRP 922
SS + N+ I A L+AGLYP VA++R
Sbjct: 934 DNAPSSHVPPSKFIFPPFTTLDDRVFEAGGQHFNENSTSTRCILACLVAGLYPNVAQMRM 993
Query: 923 P--HKN-------GRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
P H++ GR V+ T G++ +HP S+ K + PL+VY + +
Sbjct: 994 PRGHRSVGGGSYGGRHTVKFATFDGSECLVHPSSVAGK---ETAFSSPLLVYVDKVK-TS 1049
Query: 972 GMHVRNCTVVGPLPLLLLAT 991
+R +VV PL ++L +
Sbjct: 1050 ATFLREVSVVAPLHVILFGS 1069
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 148/238 (62%), Gaps = 19/238 (7%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
S A + + ++S +++ + +LR+ R LP + ++ + + + + V+I GETG G
Sbjct: 297 SDAALDVTLKSSWEKLKTEGSLRK---ARDSLPAHNVRETLRAALQKHNTVVIGGETGSG 353
Query: 217 KTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
KTTQ+PQFL E + +G + IVCTQPRR++ATSVA R++ ER E G +GY IRLE
Sbjct: 354 KTTQIPQFLYEFMCEEGHGSSANIVCTQPRRLAATSVALRVAEERDEAAGGTVGYSIRLE 413
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+ K + I +CT G++LR L + + ++H++VDEIHER +D
Sbjct: 414 NCVSKKTQITYCTTGIVLRRLQTDKY--------------LGRVSHVVVDEIHERGVDTD 459
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
F+L ++RD++ L+++LMSAT+D++ F++YF G PVI + G T+PVK +LE ++
Sbjct: 460 FLLILLRDLVRRRQDLKVVLMSATMDSELFARYFDGAPVISIAGRTFPVKVMHLEQII 517
>gi|297662534|ref|XP_002809755.1| PREDICTED: ATP-dependent RNA helicase A [Pongo abelii]
gi|71153339|sp|Q5R874.1|DHX9_PONAB RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; AltName: Full=Nuclear DNA
helicase II; Short=NDH II
gi|55730630|emb|CAH92036.1| hypothetical protein [Pongo abelii]
Length = 1269
Score = 243 bits (619), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|444724579|gb|ELW65181.1| putative ATP-dependent RNA helicase DHX36 [Tupaia chinensis]
Length = 866
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 213/400 (53%), Gaps = 63/400 (15%)
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
V +++VFKR PPG RKI+++TNIAET+ITIDDVV+VID G++KE +D NN+ST+ + W
Sbjct: 445 VLEEEVFKRTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEW 504
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
VSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 505 VSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLG- 563
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+ F
Sbjct: 564 GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFG 623
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
L CLDP LT+A + ++DPF +P+ + K GQ + + A F
Sbjct: 624 ALFCCLDPVLTIAASLSFKDPFVIPLMLHNMK--------------GQFAEHLLGAGFVS 669
Query: 845 WKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI 904
+N P+D S + N+ I
Sbjct: 670 SRN-----------------------------------------PKDPKS-NINSDNEKI 687
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMV 962
I AV+ AGLYP VA++R R+ V+ T V +HP S+N ++TD +
Sbjct: 688 IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVN----VEQTDFHYNWL 743
Query: 963 YDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+ +++ +CT V P LL +I++ D E
Sbjct: 744 IYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 783
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 132/204 (64%), Gaps = 42/204 (20%)
Query: 197 ITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAER 254
+ + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQPRRISA SVAER
Sbjct: 202 LVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSECRIVCTQPRRISAISVAER 261
Query: 255 ISVERGENIGD--NIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAK 312
++ ER E+ G+ + GY+IRL+ +H
Sbjct: 262 VAAERAESCGNGNSTGYQIRLQ----RH-------------------------------- 285
Query: 313 DDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCP 372
+S+++HI++DEIHER+ SD ++ +I+D+L L++ILMSATL+A++FS+YFG CP
Sbjct: 286 --LSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRSDLKVILMSATLNAEKFSEYFGNCP 343
Query: 373 VIQVPGFTYPVKSFYLEDVLSILK 396
+I +PGFT+PV + LED++ ++
Sbjct: 344 MIHIPGFTFPVVEYLLEDIIEKIR 367
>gi|307383|gb|AAB48855.1| RNA helicase A [Homo sapiens]
Length = 1279
Score = 242 bits (618), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 245/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 623 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 681
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 682 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 741
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR AG C+HL S+ R L PE+ R P+ E+
Sbjct: 742 NNMTNYSTVWASKTNLEQRKGRAGRSTAGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 801
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 802 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 860
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE K+ A SD
Sbjct: 861 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFV-----NEGKQLGYIHRNFAG--NRFSD 913
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 914 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 972
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 973 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1027
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + + P V+ E R + + T+V PL LLL A++
Sbjct: 1028 CPFSSQDMNYPSPFFVFGEKIRTR-AISAKGMTLVPPLQLLLFASK 1072
Score = 203 bits (517), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 154/239 (64%), Gaps = 21/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESV 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD + F
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTSF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++ MSAT+D F +YF CP +++ TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVFMSATIDTSMFCEYFFNCPSLKL-WRTYPVQEYFLEDCIQM 580
>gi|388858630|emb|CCF47897.1| probable DNA/RNA helicase (DEAD/H box family II) [Ustilago hordei]
Length = 1686
Score = 242 bits (618), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 245/466 (52%), Gaps = 49/466 (10%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINK 576
+L + + + +D L +N +I+ LI ++L ++C++ + A L+F+PG +I K
Sbjct: 1109 SLGKAYRSKTIDT-LGRMNEYVINHDLIIKILERVCLEKDLESFSAATLIFMPGLAEIRK 1167
Query: 577 TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
D L+ +P F F + PLHS + S Q VF PPPG RKI+++TNIAET ITI D
Sbjct: 1168 CHDMLVDHPTFGGPG-FQLFPLHSTISSENQGAVFNVPPPGVRKIVIATNIAETGITIPD 1226
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
+ VIDSG+ E YD +S L ++++++AKQR GRAGR Q GIC+HL+++ R S
Sbjct: 1227 ITCVIDSGKHTEMRYDEKRQISRLVECFIARSNAKQRRGRAGRVQEGICFHLFTKYRHDS 1286
Query: 697 -LPDFQVPEIKRIPIEELCLQVKLLDPNC--NIEDFLQKTLDPPVSVTIRNAIIVLQDIG 753
L + +PE+ R+ ++ L L++K++ +IE+ L + LDPP ++ AI L ++
Sbjct: 1287 YLDEHPLPEMLRLSLQGLALKLKIMKIKIGNSIENALSQALDPPSPANVQRAIAALVEVK 1346
Query: 754 ALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPN 813
AL+ E++T LG L + + M K L A L CLDPALT+A A + + PF P
Sbjct: 1347 ALTSTEEITHLGRHLSKMPLDVHMGKFLLVATLFKCLDPALTIAAALNSKSPFMTPFGKE 1406
Query: 814 EKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLG 873
+ F+L G SD L + AF ++ + + FC++ F+S + +
Sbjct: 1407 LEADRAKQSFKL-----GDSDFLTIANAFNGFRRSTAQNHHRTFCNRSFLSIQNLLQIEE 1461
Query: 874 MRKQLQTELIKNGFIPED-------------------------VSSCSH---NARVPGII 905
+R+Q + LI F+ D ++ +H N+ +I
Sbjct: 1462 LRQQYFSYLIDASFVSVDDAFRQELDKLRYRSGGSANYSKLRFMTIPAHLDVNSTSLAMI 1521
Query: 906 HAVLMAGLYPMVARLRPPHKNGRRF-VETAGGAK-VRLHPHSLNFK 949
HA L AGLYP + + + + + ++T G + +HP S+NFK
Sbjct: 1522 HATLAAGLYPKLLNI-----DSKTYQLKTIGNNQPTSIHPSSVNFK 1562
Score = 212 bits (540), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 168/267 (62%), Gaps = 22/267 (8%)
Query: 134 ANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSF 193
N S +++T + P+ S+A E ++RI + ++++ R LPI++
Sbjct: 789 GNASAAAEQTELGELSAASAPQPSEARAKEIAEYFSNRI-ASPSYQKMLPGRQSLPIANH 847
Query: 194 KDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAE 253
+ I V++NQ+ ++SGETGCGK+TQVP ++LEH S+G CKI T+PRRISA S+AE
Sbjct: 848 RQKILDLVENNQIFVLSGETGCGKSTQVPAYILEHCMSQGRNCKIYVTEPRRISAISLAE 907
Query: 254 RISVERGE---NIGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
R+S E GE ++G N +GY IRLES GK++ +V+ T G++LR+L +G +
Sbjct: 908 RVSEELGEPCKSVGSNDSLVGYAIRLESNVGKNARLVYATTGIVLRML--EGTA------ 959
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQY 367
+ +TH+I+DE+HER SDF+L I++ ++ L++ILMSAT+DA+R S+Y
Sbjct: 960 -------FNEITHVIIDEVHERSIESDFLLVILKTLIAHRKDLKVILMSATVDAERISKY 1012
Query: 368 FGGCPVIQVPGFTYPVKSFYLEDVLSI 394
GGCP I VPG T+PV YLED + +
Sbjct: 1013 CGGCPTIAVPGRTFPVNVHYLEDAVEM 1039
>gi|380810168|gb|AFE76959.1| ATP-dependent RNA helicase A [Macaca mulatta]
Length = 1166
Score = 242 bits (618), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|426332974|ref|XP_004028065.1| PREDICTED: ATP-dependent RNA helicase A isoform 1 [Gorilla gorilla
gorilla]
Length = 1270
Score = 242 bits (618), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQGILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|388454543|ref|NP_001253117.1| ATP-dependent RNA helicase A [Macaca mulatta]
gi|383416221|gb|AFH31324.1| ATP-dependent RNA helicase A [Macaca mulatta]
gi|384945584|gb|AFI36397.1| ATP-dependent RNA helicase A [Macaca mulatta]
Length = 1275
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|444730524|gb|ELW70906.1| ATP-dependent RNA helicase A [Tupaia chinensis]
Length = 1489
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 245/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 727 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 785
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 786 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 845
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 846 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 905
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 906 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 964
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 965 PRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYVHRNFAGTRF--SD 1017
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 1018 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 1076
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 1077 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSIN 1131
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1132 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1176
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 151/230 (65%), Gaps = 19/230 (8%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKTTQVPQF+L+
Sbjct: 471 LMYQLEQDHDLQAILQERELLPVKKFESEILEAISENSVVIIRGATGCGKTTQVPQFILD 530
Query: 228 HIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIV 284
+ C IV TQPRRISA +VAER++ ERGE G + GY +R ES + H+SI+
Sbjct: 531 DFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIM 590
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT GVLLR L + + ++H+IVDEIHERD +DF+L ++RD++
Sbjct: 591 FCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDFLLVVLRDVV 634
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 635 QAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 684
>gi|100913206|ref|NP_001348.2| ATP-dependent RNA helicase A [Homo sapiens]
gi|332811349|ref|XP_003308679.1| PREDICTED: ATP-dependent RNA helicase A isoform 1 [Pan troglodytes]
gi|397508714|ref|XP_003824791.1| PREDICTED: ATP-dependent RNA helicase A [Pan paniscus]
gi|116241330|sp|Q08211.4|DHX9_HUMAN RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; AltName: Full=Leukophysin;
Short=LKP; AltName: Full=Nuclear DNA helicase II;
Short=NDH II
gi|119611544|gb|EAW91138.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9, isoform CRA_b [Homo
sapiens]
gi|187952519|gb|AAI37137.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapiens]
gi|255652739|dbj|BAH90798.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9, partial [synthetic
construct]
gi|410211166|gb|JAA02802.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Pan troglodytes]
gi|410260646|gb|JAA18289.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Pan troglodytes]
gi|410308470|gb|JAA32835.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Pan troglodytes]
Length = 1270
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|403266627|ref|XP_003925470.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A [Saimiri
boliviensis boliviensis]
Length = 1243
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 590 MSQLNEKETPFELIESLLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 648
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 649 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 708
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 709 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 768
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 769 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 827
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 828 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 880
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 881 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 939
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 940 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 994
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 995 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1039
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 104/154 (67%), Gaps = 17/154 (11%)
Query: 242 QPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGV 300
QPRRISA SVAER++ ERGE G + GY +R ES + H+SI+FCT GVLLR L
Sbjct: 410 QPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL----- 464
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
+ + ++H+IVDEIHERD +DF+L ++RD++ +YP +R++LMSAT+D
Sbjct: 465 -----------EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATID 513
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 514 TSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 547
>gi|355746108|gb|EHH50733.1| hypothetical protein EGM_01605 [Macaca fascicularis]
Length = 1275
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|355558958|gb|EHH15738.1| hypothetical protein EGK_01870 [Macaca mulatta]
Length = 1378
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 689 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 747
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 748 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 807
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 808 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 867
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 868 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 926
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 927 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 979
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 980 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 1038
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 1039 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1093
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1094 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1138
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 424 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 483
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 484 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 543
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 544 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 587
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 588 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 646
>gi|224010551|ref|XP_002294233.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970250|gb|EED88588.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 568
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 176/262 (67%), Gaps = 1/262 (0%)
Query: 549 EQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQK 608
E+ + + DGAILVF PGW +I++ L + P F D +KF ++PLHS +PS Q+
Sbjct: 307 EEFGTHVALSYGDGAILVFFPGWGEISEFSLLLDSTPPFSDRTKFSVLPLHSGIPSKDQR 366
Query: 609 KVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 668
+VF RPP G RKIIL+TNIAET++TI+DV +V+D+GR KEKSYDP+ STLQ SW+S+A
Sbjct: 367 QVFIRPPVGVRKIILATNIAETSLTIEDVAFVLDTGRSKEKSYDPHLKTSTLQESWISQA 426
Query: 669 SAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED 728
SAKQR GRAG+C+AG+C+HL+S+ R + + F E+ R P+EE+CLQ K + +
Sbjct: 427 SAKQRKGRAGKCKAGVCFHLFSRRRHSFMRPFVESELLRTPLEEICLQCKRVSCFGSSYP 486
Query: 729 FLQKTLDPPVSVTIRNAIIVLQDIGALSLD-EKVTELGEKLGCLSVHPLMSKMLFFAILM 787
L+ L P S ++ NAI +L ++GA+ D ++T+LG L LS+ P + KM+ + L+
Sbjct: 487 RLRLLLSCPFSKSVMNAIELLVELGAMDDDTNELTDLGVCLSALSLEPRVGKMVIMSHLI 546
Query: 788 DCLDPALTLACASDYRDPFTLP 809
C + ++A A Y+ PF LP
Sbjct: 547 GCTKASSSMAVAMSYKSPFALP 568
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 151/232 (65%), Gaps = 19/232 (8%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDS--NQVVLISGETGCGKTTQVPQFLLE--HIWSKGE 234
R+++++R LP + I S + + NQVV+++G+TGCGK+TQVPQFLL+ HI G
Sbjct: 24 RKMMDQRMNLPAFGYAKDICSILRNKRNQVVILTGDTGCGKSTQVPQFLLDDPHI---GP 80
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
TC I+ TQPRRISA SVAER++ ER E +G+++GY +RLE+ K + ++F T GVL++
Sbjct: 81 TCNIIVTQPRRISAISVAERVASERCEQVGNSVGYSVRLETAASKKTQLMFVTPGVLMK- 139
Query: 295 LVSQGVSRLKEASNKPAKDD----VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
RL + N+ D +S THII+DEIHERD+ ++F++ ++D+L L
Sbjct: 140 -------RLHPSDNENYADGNVQRLSEYTHIIMDEIHERDKNTEFLMIALQDLLEERDDL 192
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
+LILMSAT+ ++Y+ I +PG T+PV+ F+LEDVL++ + H
Sbjct: 193 QLILMSATMPTRDLAEYWSMPAEINIPGRTFPVQEFFLEDVLTMTGFVDDIH 244
>gi|302912443|ref|XP_003050702.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731640|gb|EEU44989.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1422
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 244/490 (49%), Gaps = 50/490 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ I+ LI QL+ I +D + AILVFLPG +I D LL +P F
Sbjct: 864 LAQLDEYRIEFDLIVQLIAHIAVDDDLQNYSKAILVFLPGIAEIRTLNDMLLGDPRF--A 921
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++++ PLHS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 922 KEWLVYPLHSSIATEDQESAFLIPPPGIRKIVLATNIAETGITIPDVTCVIDTGKHREMR 981
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R +L D Q PE+ R+
Sbjct: 982 FDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTKYRHDNLMSDQQTPEMLRLS 1041
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L LDPP + IR AI L D+ AL+ E++T LG +L
Sbjct: 1042 LQDLAIRVKICKIG-GIEETLGDALDPPSAKNIRRAIDALVDVRALTQAEELTPLGHQLA 1100
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ ++ CLD A+T+A + PF+ P +RA A +
Sbjct: 1101 RLPLDVFLGKLILLGVIFKCLDMAITVAAILSSKSPFSAPFG----QRAQADNARML-FR 1155
Query: 830 GGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G SD L + A+ WK Q G+E FC + F+S + + ++ QL T L +
Sbjct: 1156 RGDSDLLTIYNAYLAWKRVCQSTGGGGKEFQFCRKNFLSQQTLANIEDLKGQLLTSLADS 1215
Query: 886 GFIP--EDVSSCSHNARVPG------------------------IIHAVLMAGLYPMVAR 919
GF+ E+ AR G + +V+ YP +
Sbjct: 1216 GFLSLTEEERRTLSRARFSGGRGRRHQHFFEIPRRVNLNSDNDVVSASVIAWSFYPKILV 1275
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCT 979
P G R + T + LHP S+N + D + Y I + H T
Sbjct: 1276 REAPGSKGLRNIGT--NQSISLHPSSVN-----RGRLDLRWLSYYHIMQSKTVYHAHEAT 1328
Query: 980 VVGPLPLLLL 989
V P + LL
Sbjct: 1329 AVEPFAIALL 1338
Score = 199 bits (506), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 185/304 (60%), Gaps = 34/304 (11%)
Query: 182 VEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCT 241
++ R +LP+ F+ + VD +QVV++ GETGCGK+TQVP FLLEH S+G+ CK+ CT
Sbjct: 613 LQSRMQLPMWHFRQQVLDAVDGHQVVIVCGETGCGKSTQVPSFLLEHQLSQGKPCKVYCT 672
Query: 242 QPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
+PRRISA S+A R+S E GEN +G N +GY IRLE+K K + +V+ T G+++R+L
Sbjct: 673 EPRRISAISLARRVSEELGENRNDLGTNRSLVGYSIRLEAKASKETRLVYATTGIVMRML 732
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
E SN D+ +TH+++DE+HER SDF+L +++ +L L+++LM
Sbjct: 733 ---------EGSN-----DLQEVTHLVLDEVHERSIDSDFLLIVLKKLLKRRKDLKVVLM 778
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDP 415
SAT+DA+RFS Y G PV+ VPG T+PV+ YLED + + ++ + + ++
Sbjct: 779 SATVDAERFSAYLDGAPVLNVPGRTFPVQVRYLEDAVELTGYTPADSQPDKMVDIDDDLA 838
Query: 416 ELTEEN-KSTLDEAI---------SLAWSND---EFDMLLELVS-LEGSPNVYNYQHTLT 461
E EN KS + +++ SLA ++ EFD++++L++ + ++ NY +
Sbjct: 839 ESEGENPKSDVSKSLTGYSSRTRSSLAQLDEYRIEFDLIVQLIAHIAVDDDLQNYSKAIL 898
Query: 462 GLTP 465
P
Sbjct: 899 VFLP 902
>gi|332230603|ref|XP_003264483.1| PREDICTED: ATP-dependent RNA helicase A isoform 1 [Nomascus
leucogenys]
Length = 1270
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQGILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|303281348|ref|XP_003059966.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458621|gb|EEH55918.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1681
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 179/572 (31%), Positives = 260/572 (45%), Gaps = 122/572 (21%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICM----------------------------DSEDGAI 564
+ +A V+ L++ LIE+L+ KI DS+ GAI
Sbjct: 1048 RSIANVDESLLNYELIERLIAKIIRVELSEGERALVAPSAAPGRGGKRSPGESDSK-GAI 1106
Query: 565 LVFLPGWEDINKTRDRLLANPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
LVFLPG +IN+ +L + F D + + +PL+ + Q+K+F PP G RKI+
Sbjct: 1107 LVFLPGQAEINRLIRQLERSQFLEPHDVGELLFLPLYGALSGADQRKIFAPPPRGARKIV 1166
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEK------------------------SYDPYNNVS 658
++TNIAET++TIDDV YV+D+G + S+D +S
Sbjct: 1167 VATNIAETSVTIDDVRYVVDAGHTPRRLSTPLLTPFDSTPTFVASRGPSTLSHDSTRGMS 1226
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
L +WVS+A+AKQR GRAGR G + L+S+ + A + D Q PE+ R P+++LCL VK
Sbjct: 1227 VLADAWVSRAAAKQRRGRAGRVSPGARFALFSRAQFARMSDHQPPEMLRTPLQQLCLNVK 1286
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDI----------------GALSLD---- 758
+ P +E L PP +R A+ L + GA+S D
Sbjct: 1287 AMAPGVGVETTLCAAPTPPPRDAVRAALDELMALRALDVRRDSATSASSDGAVSSDAEKH 1346
Query: 759 ----EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNE 814
E +T LG+ L + V + KML F L+ CLDP LT+A A R F +SP +
Sbjct: 1347 PNNPETLTPLGKHLAHMPVDARVGKMLLFGALLGCLDPILTIAAAMSGRQLF---VSPKD 1403
Query: 815 KK-RATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLG 873
KK A A K ++A+ G+SD L + +A+ W G + F+S + ++
Sbjct: 1404 KKAEADAMKKKIAAP--GKSDHLTMASAYAAWWKCPGAGARRKHADERFLSHQALEGIMA 1461
Query: 874 MRKQLQTELIKNGFIPE-----------DVSSCSHNARVPGIIHAVLMAGLYPMVARLRP 922
R L GFIP NA V ++ A L+AG YP V R++
Sbjct: 1462 SRLDYAGVLADLGFIPRVYVRAMRRDGAGGGDADRNASVARVVKAALVAGFYPQVVRVQH 1521
Query: 923 PHKNGRRFVETAGGA-------------------KVRLHPHSLNFKLSFKKTDDCPLMVY 963
P +FV TAGGA +V LHP S+N D P +VY
Sbjct: 1522 PET---KFVNTAGGAREKESVDGRGVKYFCKDVGRVFLHPSSVNVA---SGKFDSPWLVY 1575
Query: 964 DEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
E ++VR+ T+VG LLL E+ V
Sbjct: 1576 SERVE-TARVYVRDNTMVGAYALLLFGGELVV 1606
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 137/277 (49%), Gaps = 74/277 (26%)
Query: 141 DKTRGKRVDIFCKPKMSKAEIA---MKVESLTSRIEKDANLRQIVEERSKLPISSFKDVI 197
D+ R + D P + AE A ES S ++V R+ LP S+ ++ +
Sbjct: 666 DRNRPRGRDAALSPSEAAAESARLKAAQESYFSGGGGSGAASKMVATRANLPASASREEV 725
Query: 198 TSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERI 255
VD + VV++SGETGCGK+TQVPQF+LE K G +C IVCTQPRRISA +AER+
Sbjct: 726 VRAVDGSPVVVLSGETGCGKSTQVPQFILESAIDKRAGGSCNIVCTQPRRISAIGLAERV 785
Query: 256 SVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDV 315
+ ER EN GD +G
Sbjct: 786 ASERVENCGDVVG----------------------------------------------- 798
Query: 316 SALTHIIVDEIHERDRYSDFMLAIIRDML-PSYPHLRLILMSATLDADRFSQYF------ 368
+TH+++DE+HER SD +L ++R ++ + L+++LMSAT DAD F+ YF
Sbjct: 799 --VTHVVLDEVHERSVESDLLLLLLRRVICGARKDLKIVLMSATADADFFAAYFSEPSAA 856
Query: 369 ----GGCPVIQVP-------GFTYPVKSFYLEDVLSI 394
GG V+ P GFT+PV+ ++LEDVL +
Sbjct: 857 SVAAGG--VVATPSSKVFIEGFTHPVREYFLEDVLEL 891
>gi|410986036|ref|XP_003999318.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A [Felis
catus]
Length = 1341
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 625 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 683
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 684 ILPLHSQIPREEQRKVFDPVPSGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 743
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 744 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 803
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 804 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 862
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 863 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYVHRNFAG--NRFSD 915
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 916 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 974
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 975 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1029
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1030 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1074
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N V++I G TGCGKT
Sbjct: 360 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVIIIRGATGCGKT 419
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 420 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESV 479
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 480 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 523
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 524 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 582
>gi|344278461|ref|XP_003411012.1| PREDICTED: ATP-dependent RNA helicase A-like [Loxodonta africana]
Length = 1286
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 242/465 (52%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 625 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNAHF-GSHRYQ 683
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 684 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 743
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 744 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 803
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 804 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 862
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF +E KR A SD
Sbjct: 863 PRFGKMMIMGCIFYVGDAVCTIAAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 915
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF E +
Sbjct: 916 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECL 975
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 976 LTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNC 1030
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + CP V+ E R + + T+V PL LLL A++
Sbjct: 1031 PFSSQDMKYPCPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1074
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 151/230 (65%), Gaps = 19/230 (8%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L ++E D NL+ I++ER LP+ F++ I + N VV+I G TGCGKTTQVPQF+L+
Sbjct: 369 LMYQLEHDRNLQGILQERELLPVKKFENEILDAISQNSVVIIRGATGCGKTTQVPQFILD 428
Query: 228 HIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIV 284
+ C IV TQPRRISA SVAER++ ERGE G + GY +R ES + H+SI+
Sbjct: 429 DCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIM 488
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT GVLLR L + + ++H+IVDEIHERD +DF+L ++RD++
Sbjct: 489 FCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDFLLVVLRDVV 532
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 533 QAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQM 582
>gi|71412350|ref|XP_808364.1| RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70872554|gb|EAN86513.1| RNA helicase, putative [Trypanosoma cruzi]
Length = 1294
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 262/489 (53%), Gaps = 45/489 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKI-CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
++ +N ++I+ LIE ++ I + DGA+L+FLPG +I + ++L +NP R ++
Sbjct: 655 ISRMNLDVINYELIESVVFYIDTVMKVDGAVLIFLPGMAEIMRCMEQLKSNP--RLSNSC 712
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
++ LHS + S +Q VF+RPP G RK+++ TNI ET+ITIDD V+VIDSG+ KE YD
Sbjct: 713 LMYNLHSSLGSSEQHGVFQRPPKGKRKVVIGTNIMETSITIDDAVFVIDSGKAKENRYDA 772
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
++S L + VSKA+ +QR GRAGR + G C+ L++ + +L D Q+ E+ R+P+E L
Sbjct: 773 RKSLSQLVTVNVSKANCRQRQGRAGRVREGFCFRLFTSAQFEALDDHQLCEMHRVPLEGL 832
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ+ L+ +E +LQK L PP +R ++ L +GAL+LD+++T LG+ L L +
Sbjct: 833 ILQIYSLNLGDEVE-YLQKALSPPEERAVRGSVRALTTLGALTLDKRLTSLGQHLANLPL 891
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
+ KM+ ++ C+DP LT+A R PF + + F A Y S
Sbjct: 892 DVRIGKMIIHGAILHCVDPVLTIAACLAVRSPFLSMMDYQAEVEGVRKAF--AGEY--MS 947
Query: 834 DQLAVIAAFECWKNAK-QRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
D L A+ W + G A C++Y++S + + ++Q + L + GFI E
Sbjct: 948 DHLVSWFAYASWVFMQYNEGSSAAKKLCARYYLSLPALKQIQSTKRQYERYLYEAGFIEE 1007
Query: 891 DVSSCSH-------------------------NARVPGIIHAVLMAGLYPMVARLRP-PH 924
SH NA I + ++AGLYP +AR++
Sbjct: 1008 TPIHSSHDRFLYDPVITLEDRLYESGGRQFNANAGSVKCILSCVVAGLYPNIARVQTEAG 1067
Query: 925 KNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVY-DEITRGDGGMHVRNCTVV 981
K G F++ T G++V +HP S+ + +K PL+VY D+I +R+ +VV
Sbjct: 1068 KKGGTFLKLTTFDGSEVMIHPSSV---VGREKRFLSPLLVYVDKIK--TSATFLRDVSVV 1122
Query: 982 GPLPLLLLA 990
PL ++L +
Sbjct: 1123 TPLHVILFS 1131
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 140/213 (65%), Gaps = 16/213 (7%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQ 242
R +LP ++ + + +QVV+I GETG GKTTQ+PQ+L E + G + IVCTQ
Sbjct: 394 REQLPAFQVREELREIISKHQVVVIGGETGSGKTTQIPQYLYEFMCESGMGGSANIVCTQ 453
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRR++ATSVA R++ ER E +G +GY IRLES + + I +CT G++LR L
Sbjct: 454 PRRLAATSVALRVAEERDEAVGGVVGYTIRLESCVSRRTQITYCTTGIVLRRL------- 506
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
+ + +++HI+VDEIHER +DF+L ++RD++ L+++LMSAT+D++
Sbjct: 507 -------QVEKFLGSVSHIVVDEIHERGVDTDFLLILLRDLIQRRSDLKVVLMSATMDSE 559
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
F++YFGG PVI + G TYPV+ F+LE+++ ++
Sbjct: 560 LFARYFGGAPVISIQGRTYPVQHFHLEEIIPMV 592
>gi|297840685|ref|XP_002888224.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297334065|gb|EFH64483.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 1418
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 252/492 (51%), Gaps = 47/492 (9%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
+N ++ID L+E+L+ I E+GAILVFLPG +IN +RL A+ FR ++P
Sbjct: 870 LNEDIIDYELLEELICHIDDTCEEGAILVFLPGMAEINMLLNRLSASYHFRGPCGDWLLP 929
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS + S +Q+KVF RPP G RK++++TNIAET+ITI+DVVYVIDSG+ KE Y+P +
Sbjct: 930 LHSSIASTEQRKVFLRPPKGIRKVVIATNIAETSITIEDVVYVIDSGKHKENRYNPQKKL 989
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
S++ WVSKA+A+QR GRAGR + G C+ LY++ R L + + C+ +
Sbjct: 990 SSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKL----------MRPYQSCVYI 1039
Query: 718 KLLDPNCNIEDFL-QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
+ F ++ L+PP I +AI++LQ +GAL DE++T LG L L V L
Sbjct: 1040 SNYLAWVTLSRFCPRQALEPPSESAINSAILLLQKVGALEGDEELTPLGHHLAKLPVDLL 1099
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA----KFELASLYGG- 831
+ KML + + L P L++A + PF R A K E +S
Sbjct: 1100 IGKMLLYGGIFGSLSPILSIAAFLSCKSPFVYSKDEQNVDRVKLALLSDKLESSSNLNNN 1159
Query: 832 --QSDQLAVIAAFECW-KNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
QSD L V+ A+E W K ++G +A FC F++S +M + R + L G
Sbjct: 1160 DRQSDHLLVVVAYEKWVKILHEQGFKAAERFCESKFLNSSMMQTIRDRRVEFGFLLADIG 1219
Query: 887 FI--PEDVSSCSHNARV---------------PGIIHAVLMAGLYPMVA-----RLRPPH 924
I P+ N V P ++ A+L AGL P +A RL P
Sbjct: 1220 LINLPKGEGRRKENLDVWFSDKTQPFNMYSQEPEVVKAILCAGLCPNIAEGLVNRLTKPA 1279
Query: 925 KNGRRF-VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGP 983
K + V G +V + S+N K PL+V+ E + + +++++ TVV P
Sbjct: 1280 KETECYAVWHDGKREVHIDRTSINKNC---KAFQYPLIVFLEKVQKNKLVYLQDTTVVSP 1336
Query: 984 LPLLLLATEIAV 995
+LL + V
Sbjct: 1337 FSILLFGGSVNV 1348
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 153/261 (58%), Gaps = 34/261 (13%)
Query: 148 VDIFCKPKMSKAEIAMKVE--SLTSRIEKDANL---RQIVEERSKLPISSFKDVITSTVD 202
+D+ +K +M+ E SL + E + +++++ R+ LPIS K I +
Sbjct: 564 LDVVKSNHRAKRNFSMETECSSLKQKQENKKKMPKYKEMLKTRAALPISEVKKDILQKLK 623
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERG 260
V+++ GETG GKTTQVPQF+L+ + G C I+CTQPR A SVA+R++ ER
Sbjct: 624 EKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPR---AISVAQRVADERC 680
Query: 261 E---NIGDN-IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVS 316
E D+ + Y++R ++ + ++FCT G+LLR LV +K KD
Sbjct: 681 EPPPGFDDSLVAYQVRHQNARSDKTRLLFCTTGILLRKLVG----------DKTLKD--- 727
Query: 317 ALTHIIVDEIHERDRYSDFMLAIIRDMLP------SYPHLRLILMSATLDADRFSQYFGG 370
+THIIVDE+HER DF+L I++ ++ + P L++ILMSAT+DA +FS+YFG
Sbjct: 728 -VTHIIVDEVHERSLMGDFLLIILKILIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQ 786
Query: 371 CPVIQVPGFTYPVKSFYLEDV 391
CP+I G T+PV +++LED+
Sbjct: 787 CPIITAQGRTHPVTTYFLEDI 807
>gi|332811351|ref|XP_003308680.1| PREDICTED: ATP-dependent RNA helicase A isoform 2 [Pan troglodytes]
Length = 1056
Score = 241 bits (616), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 239/454 (52%), Gaps = 24/454 (5%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
LIE LL+ I + GA+LVFLPGW I + L NP F + ++ I+PLHS +P +
Sbjct: 422 LIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQILPLHSQIPREE 480
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +NN++ + W S
Sbjct: 481 QRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWAS 540
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
K + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+ L +KLL I
Sbjct: 541 KTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLG-GI 599
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL K ++PP + A L+++ AL ++++T LG L L + P KM+ +
Sbjct: 600 GQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCI 659
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
D T+A A+ + +PF NE KR A SD +A+++ F+ W
Sbjct: 660 FYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSDHVALLSVFQAWD 712
Query: 847 NAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED-----VSSCSHNA 899
+A+ G+EA FC ++ + M + QL+ LI +GF PED V + +
Sbjct: 713 DARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDCLLTQVFTNTGPD 771
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD-DC 958
++ ++L G+YP V HK R+ + T G + +H S+N S +
Sbjct: 772 NNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNCPFSSQDMKYPS 826
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
P V+ E R + + T+V PL LLL A++
Sbjct: 827 PFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 859
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 145 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 204
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 205 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 264
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 265 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 308
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 309 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 367
>gi|126306309|ref|XP_001366536.1| PREDICTED: ATP-dependent RNA helicase A [Monodelphis domestica]
Length = 1256
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 244/465 (52%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 626 MAQMNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYR 684
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYV+DS + K K + +
Sbjct: 685 ILPLHSQIPREEQRKVFDPVPTGVTKVILSTNIAETSITINDVVYVVDSCKQKVKLFTAH 744
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W S+ + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 745 NNMTNYATVWASRTNLEQRKGRAGRVRPGFCFHLCSRARYDRLETHMTPEMFRTPLHEIA 804
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 805 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 863
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 864 PRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYVHRNFAG--NRFSD 916
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ L+ +GF E +
Sbjct: 917 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILVNSGFPEECL 976
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ N P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 977 MTQVFNNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNC 1031
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1032 PFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1075
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 160/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F++ I + N VV+I G TGCGKT
Sbjct: 361 QISMDLKNELMYQLEQDHDLQAILQEREMLPVKKFENEILRAIHQNSVVIIRGATGCGKT 420
Query: 219 TQVPQFLLEHIW--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQ++L+ ++ C IV TQPRRISA SVAER+S ERGE G + GY +R ES
Sbjct: 421 TQVPQYILDECIQNNRAAECNIVVTQPRRISAVSVAERVSYERGEEPGKSCGYSVRFESV 480
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 481 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 524
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 525 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVFGRTYPVQEYFLEDCIQM 583
>gi|393905460|gb|EJD73978.1| hypothetical protein LOAG_18639 [Loa loa]
Length = 1586
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 179/610 (29%), Positives = 294/610 (48%), Gaps = 83/610 (13%)
Query: 530 LLDKYLATVNPELIDLVLIEQLLRKI--CMDSE-DGAILVFLPGWEDINKTRDRLLANPF 586
L+D Y+ + + ++ V + + I CMDS G+ILVFLPG+EDI R++ +
Sbjct: 673 LVDSYMISGGEQWLESVDTDLTVAVINYCMDSPVHGSILVFLPGYEDILAVREKAIK--M 730
Query: 587 FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
++K I LHS + S Q+++F+ G RK+ILSTNIAE ++TIDDVV+VID G++
Sbjct: 731 QGCSTKPAIFTLHSQMGSQDQQRIFEPVGRGYRKVILSTNIAEASLTIDDVVFVIDCGKV 790
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIK 706
KEK YD +S L+ +W++K++A+QRAGRAGRC+ G C+ L++ A + Q+PE+K
Sbjct: 791 KEKIYDHSTRISQLKMTWIAKSNAEQRAGRAGRCRNGYCFRLFTTEDYARMNPTQLPEMK 850
Query: 707 RIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL---------- 755
R I E+CL K+ P ++ FL +PP +V I + L+ IGA+
Sbjct: 851 RSAIHEVCLHAKMFAPRKYSVRQFLLNAPEPPSAVAIDRSFEFLEQIGAVFKSRQESSQM 910
Query: 756 ---------------SLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACAS 800
+ + +T+LG + L + P +++ L F I + CL P LTL
Sbjct: 911 SHITDNSYFANTRDRNGEPDLTDLGRHIVQLPLCPQLARFLLFGICLKCLSPVLTLVATL 970
Query: 801 DYRDPFTLPISPNEKKRATA--AKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFC 858
+RDPF LP S ++R +A A+ A SD + + + + GQ + FC
Sbjct: 971 SHRDPFVLPPSGEREERNSAMIARDVFAGF--DYSDHMTFLRIYNAFIKLPSHGQ-SNFC 1027
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC-----SHNARVPGIIHAVLMAGL 913
+ ++S M M++G+R+QL EL K +P S + + +I A L+AG
Sbjct: 1028 TSNYLSLNAMRMIVGIRQQLFMELQKLRLLPASCRSADDPDFNRYSNSWPMIQAALVAGS 1087
Query: 914 YPMVARLRPPHKNGR-RFVETAG-------GAKVRLHPHSLNF------KLSFKKTDDCP 959
YP + R G+ R + T+ G V+ S KL K
Sbjct: 1088 YPNIGFTR---SGGQIRKIRTSNEVASLPYGCAVKRQASSAGMNGMGVGKLG-KPEPVIE 1143
Query: 960 LMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDD-DMSDDDADEN 1018
+ + E+++ + +R T V PL +LL A + + N+ D+ ++DDD D +
Sbjct: 1144 YLAFQELSKTGDNLSLRTVTAVPPLTVLLFAGPVHLKREVLNDYSIGDEFALNDDDVDTD 1203
Query: 1019 ESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAI 1078
+ ++C+ ++ WL F D+ + LR +L
Sbjct: 1204 SNTDECV-----------------------FALEPWLVFRWKFEDMQLMLKLRVKLMTYF 1240
Query: 1079 LFKVTHPQKA 1088
+F + P ++
Sbjct: 1241 IFVMKQPDRS 1250
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 179/351 (50%), Gaps = 43/351 (12%)
Query: 53 LSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKK-RVETDKGKEILPSLTFSEGSK 111
LS +R +VH + + S S G G RRV V + + T + S K
Sbjct: 54 LSIEKRKIVHSIATNCSLKSHSIGSGCNRRVVVTRFPHVDLCTYTNARDSEPIVLSIFQK 113
Query: 112 LVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSR 171
L T +P G+ +D++ + + ++ + S +R
Sbjct: 114 RALSRFLTIFPLGYGD--------------------IDLYLRSGNASRQVGSRYHSSFNR 153
Query: 172 ---IEKDANLRQIVEE-RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
+ ++R VE R LP + KD I T+ +++V +I G TGCGKTTQVPQF+LE
Sbjct: 154 PMLVPPCTSVRHSVENFRKSLPAYAMKDEILQTIRNHKVTMIVGGTGCGKTTQVPQFILE 213
Query: 228 HIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
+ +I CTQPRR+ +V+ R++ ER E +G +GY IRLE K + + + +CT
Sbjct: 214 DAAKHQQAVRIFCTQPRRLPVLAVSARVAKERNEKLGSTVGYHIRLEQKTSEQTVLTYCT 273
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
+GVLLRLL + + S ++HII+DEIHER++ +D++L +R L +
Sbjct: 274 SGVLLRLLTN--------------DTNASNISHIILDEIHEREQKTDYLLITLRQALKNR 319
Query: 348 PHLRLILMSATLDADR--FSQYFGGCPV--IQVPGFTYPVKSFYLEDVLSI 394
LR+ILMSAT++ R F +YFG V + +P + V+ FYL ++L++
Sbjct: 320 DDLRIILMSATMEESRELFRRYFGPGNVFCLDIPSTLHKVEMFYLPEILAL 370
>gi|431915942|gb|ELK16196.1| ATP-dependent RNA helicase A [Pteropus alecto]
Length = 1263
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 245/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 608 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 666
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 667 ILPLHSQIPREEQRKVFDPVPGGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 726
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 727 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTPEMFRTPLHEIA 786
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 787 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIE 845
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 846 PRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 898
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 899 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 957
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 958 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1012
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1013 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1057
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 151/230 (65%), Gaps = 19/230 (8%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L ++++D +L+ I++ER LP+ F+ I + N VV+I G TGCGKTTQVPQF+L+
Sbjct: 352 LMYQLDQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILD 411
Query: 228 HIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIV 284
+ C IV TQPRRISA SVAER++ ERGE G + GY +R ES + H+SI+
Sbjct: 412 DFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIM 471
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT GVLLR L + + ++H+IVDEIHERD +DF+L ++RD++
Sbjct: 472 FCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDFLLVVLRDVV 515
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 516 QAYPEVRIVLMSATIDTSMFCEYFFSCPIIEVYGRTYPVQEYFLEDCIQM 565
>gi|426332976|ref|XP_004028066.1| PREDICTED: ATP-dependent RNA helicase A isoform 2 [Gorilla gorilla
gorilla]
Length = 1056
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 239/454 (52%), Gaps = 24/454 (5%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
LIE LL+ I + GA+LVFLPGW I + L NP F + ++ I+PLHS +P +
Sbjct: 422 LIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQILPLHSQIPREE 480
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +NN++ + W S
Sbjct: 481 QRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWAS 540
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
K + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+ L +KLL I
Sbjct: 541 KTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLG-GI 599
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL K ++PP + A L+++ AL ++++T LG L L + P KM+ +
Sbjct: 600 GQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCI 659
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
D T+A A+ + +PF NE KR A SD +A+++ F+ W
Sbjct: 660 FYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSDHVALLSVFQAWD 712
Query: 847 NAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED-----VSSCSHNA 899
+A+ G+EA FC ++ + M + QL+ LI +GF PED V + +
Sbjct: 713 DARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDCLLTQVFTNTGPD 771
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD-DC 958
++ ++L G+YP V HK R+ + T G + +H S+N S +
Sbjct: 772 NNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNCPFSSQDMKYPS 826
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
P V+ E R + + T+V PL LLL A++
Sbjct: 827 PFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 859
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 145 QISMDLKNELMYQLEQDHDLQGILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 204
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 205 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 264
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 265 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 308
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 309 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 367
>gi|405959793|gb|EKC25785.1| ATP-dependent RNA helicase A-like protein [Crassostrea gigas]
Length = 1464
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 261/498 (52%), Gaps = 30/498 (6%)
Query: 500 QLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDS 559
+LGE+ +Q E ++ + N S+ + + +A +N + + LIE L++ I
Sbjct: 597 ELGEEMDQEENCNLL---VNNEYSEQTR-----RAMAMLNEKEMSFELIEALIKYIKTLK 648
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
GAIL+FLPGW I L +P F + +PLHS +P Q+KVF+ P G
Sbjct: 649 IPGAILIFLPGWNLIFALHRYLETHPEF-GGPMYRALPLHSQMPREDQRKVFEPVPEGVT 707
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
KIILSTNIAET++TI+DVVYV+DS + K K + +NN++ + W SK + +QR GRAGR
Sbjct: 708 KIILSTNIAETSVTINDVVYVVDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRRGRAGR 767
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
+ G +HL S+ R L PEI R P+ EL L +KLL I FL K ++PP
Sbjct: 768 VRPGFSFHLCSRARFERLDQHTTPEIFRTPLHELALAIKLLRLG-PIGSFLAKAVEPPPI 826
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
+ A +L+++ AL ++++T LG+ L L + P + KM+ + + C D T+A +
Sbjct: 827 DAVIEAEALLKEMRALDSNDELTPLGKILARLPIEPRLGKMIIYGCIFYCGDSMCTIAAS 886
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAW 856
+ + +PF I+P ++KR SL G + SD +A++ AF W+ A+ G+ E +
Sbjct: 887 TTFPEPF---ITPTDRKRLGWVH---KSLAGNRFSDHVALLNAFNLWEEARSGGEQNEMY 940
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP----GIIHAVLMAG 912
FC Q +S + M ++QL LI GF E ++ N P ++ ++L G
Sbjct: 941 FCDQKSLSMQTLRMTFEAKRQLCDILINVGFPEECLTPQVFNFTGPDRNLDMVISLLCMG 1000
Query: 913 LYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
LYP V HK R+ + T A + +H S+N K P V+ E R
Sbjct: 1001 LYPNVCY----HKEKRKVLTTESRAAL-VHKSSVNCTNKDIKFPS-PFFVFGEKIRTR-A 1053
Query: 973 MHVRNCTVVGPLPLLLLA 990
+ + ++V PL LL+ A
Sbjct: 1054 VSCKQMSMVSPLQLLMFA 1071
Score = 213 bits (542), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 167/273 (61%), Gaps = 36/273 (13%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSK 232
+ NL+ ++EER+ LP+ D I + ++ V LI GETGCGKTTQVPQF+L++
Sbjct: 373 NENLKMMMEERTHLPVYQSHDHILQVIKNSPVTLIRGETGCGKTTQVPQFILDNAIEMGV 432
Query: 233 GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVL 291
G C I+ TQPRRISA S+AER++ ERGE++G + GY +R ES ++ +I++CT G L
Sbjct: 433 GADCNIIITQPRRISAVSIAERVAQERGEDLGVSTGYSVRFESIFPRYYGAILYCTVGTL 492
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
LR L ++ + ++H+IVDEIHERD +DF+L ++RDM+ +YP LR
Sbjct: 493 LRRL----------------ENGMRGISHVIVDEIHERDINTDFLLVLLRDMVHAYPQLR 536
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK--------------- 396
+ILMSAT+D F++YFG C V++V G T+PV+ +YLED + +L
Sbjct: 537 VILMSATVDTTLFTEYFGNCQVVEVYGRTHPVQEYYLEDCIQMLGFIPPPSDKKKKKDRD 596
Query: 397 --SAESNHLDSASLIVPNEDPELTEENKSTLDE 427
E + ++ +L+V NE E T + L+E
Sbjct: 597 ELGEEMDQEENCNLLVNNEYSEQTRRAMAMLNE 629
>gi|332230605|ref|XP_003264484.1| PREDICTED: ATP-dependent RNA helicase A isoform 2 [Nomascus
leucogenys]
Length = 1056
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 239/454 (52%), Gaps = 24/454 (5%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
LIE LL+ I + GA+LVFLPGW I + L NP F + ++ I+PLHS +P +
Sbjct: 422 LIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQILPLHSQIPREE 480
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +NN++ + W S
Sbjct: 481 QRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWAS 540
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
K + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+ L +KLL I
Sbjct: 541 KTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLG-GI 599
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL K ++PP + A L+++ AL ++++T LG L L + P KM+ +
Sbjct: 600 GQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCI 659
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
D T+A A+ + +PF NE KR A SD +A+++ F+ W
Sbjct: 660 FYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSDHVALLSVFQAWD 712
Query: 847 NAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED-----VSSCSHNA 899
+A+ G+EA FC ++ + M + QL+ LI +GF PED V + +
Sbjct: 713 DARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDCLLTQVFTNTGPD 771
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD-DC 958
++ ++L G+YP V HK R+ + T G + +H S+N S +
Sbjct: 772 NNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNCPFSSQDMKYPS 826
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
P V+ E R + + T+V PL LLL A++
Sbjct: 827 PFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 859
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 145 QISMDLKNELMYQLEQDHDLQGILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 204
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 205 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 264
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 265 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 308
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 309 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 367
>gi|310792592|gb|EFQ28119.1| helicase associated domain-containing protein [Glomerella graminicola
M1.001]
Length = 1342
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 231/417 (55%), Gaps = 27/417 (6%)
Query: 543 IDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ L+ + +R+I D + G IL+FLPG +IN+ A R + ++PL
Sbjct: 813 INYDLLAETVREIDADLSHSQKTGGILIFLPGVAEINR------ACGALRSINSLHVLPL 866
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + + +QK+VF PP G RKI+++TN+AET+ITIDD+V VIDSG++KE +YDP NN+
Sbjct: 867 HASLETKEQKRVFSNPPSGKRKIVVATNVAETSITIDDIVAVIDSGKVKETTYDPVNNMR 926
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
L+ +W S+A+ KQR GRAGR QAG CY LY++ + + PEI+R+P+E++CL V+
Sbjct: 927 KLEENWASQAACKQRRGRAGRVQAGKCYKLYTRNLEQQMAERPDPEIRRVPLEQMCLSVR 986
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
+ N+ FL ++ PP S + AI +L+ +GAL DE +T LG++L + +
Sbjct: 987 AMGIR-NVAGFLSQSPTPPDSTAVDGAIKLLRRMGALDGDE-MTALGQQLAMIPADLRCA 1044
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K++ + + CLD +T+A R PF P P+++ +A A+ ++ G D L
Sbjct: 1045 KLMVYGAIFGCLDDCVTIAAILSTRSPFMSP--PDKRDQAKDARMRFSN---GDGDLLTD 1099
Query: 839 IAAFECWKNAKQRG----QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
+ AF+ W + G Q FC F+S +N + R Q + L + G + + +
Sbjct: 1100 LEAFKQWDEMRGDGVGQRQLRNFCEDNFLSWLTLNDISATRIQYYSALSEIGIVETNRYA 1159
Query: 895 CSHNARVPG--IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
+ + G ++ A+ + P +AR++ P K +F T G K L P + K
Sbjct: 1160 AAQSQSKSGMTLLRALTASAFNPQIARIQYPDK---KFTSTVSGTK-ELDPEARTIK 1212
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 147/222 (66%), Gaps = 13/222 (5%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCK 237
+++ +R +LP ++ I +TV+ N V +ISGETG GK+TQ QF+L+ ++++G +
Sbjct: 569 RMMSKRQQLPAWQVREKIINTVEHNHVTIISGETGSGKSTQSMQFILDDLYNRGLGKCVN 628
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
++ TQPRRISA +A+R++ ER +GD IGY IR ES+ ++ I F T GVLLR L +
Sbjct: 629 MLVTQPRRISALGLADRVAEERCTRVGDEIGYAIRGESRRSNNTKITFVTTGVLLRRLQT 688
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-LRLILMS 356
G R+++ + A DVS HI++DE+HER +DF+L I+R+++ + L+L+LMS
Sbjct: 689 SG-GRIEDVAASLA--DVS---HIVIDEVHERSLDTDFLLTIVREVMKERKNLLKLVLMS 742
Query: 357 ATLDADRFSQYFGG----CPVIQVPGFTYPVKSFYLEDVLSI 394
ATLDA F+ YF ++++ G TYPV FYL+D+LS+
Sbjct: 743 ATLDAASFNYYFTSQGLDVGMVEIAGRTYPVDDFYLDDILSM 784
>gi|312077406|ref|XP_003141290.1| hypothetical protein LOAG_05703 [Loa loa]
Length = 1405
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 180/611 (29%), Positives = 294/611 (48%), Gaps = 85/611 (13%)
Query: 530 LLDKYLATVNPELIDLVLIEQLLRKI--CMDSE-DGAILVFLPGWEDINKTRDRLLANPF 586
L+D Y+ + + ++ V + + I CMDS G+ILVFLPG+EDI R++ +
Sbjct: 492 LVDSYMISGGEQWLESVDTDLTVAVINYCMDSPVHGSILVFLPGYEDILAVREKAIK--M 549
Query: 587 FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
++K I LHS + S Q+++F+ G RK+ILSTNIAE ++TIDDVV+VID G++
Sbjct: 550 QGCSTKPAIFTLHSQMGSQDQQRIFEPVGRGYRKVILSTNIAEASLTIDDVVFVIDCGKV 609
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIK 706
KEK YD +S L+ +W++K++A+QRAGRAGRC+ G C+ L++ A + Q+PE+K
Sbjct: 610 KEKIYDHSTRISQLKMTWIAKSNAEQRAGRAGRCRNGYCFRLFTTEDYARMNPTQLPEMK 669
Query: 707 RIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL---------- 755
R I E+CL K+ P ++ FL +PP +V I + L+ IGA+
Sbjct: 670 RSAIHEVCLHAKMFAPRKYSVRQFLLNAPEPPSAVAIDRSFEFLEQIGAVFKSRQESSQM 729
Query: 756 ---------------SLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACAS 800
+ + +T+LG + L + P +++ L F I + CL P LTL
Sbjct: 730 SHITDNSYFANTRDRNGEPDLTDLGRHIVQLPLCPQLARFLLFGICLKCLSPVLTLVATL 789
Query: 801 DYRDPFTLPISPNEKKRATA--AKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFC 858
+RDPF LP S ++R +A A+ A SD + + + + GQ FC
Sbjct: 790 SHRDPFVLPPSGEREERNSAMIARDVFAGF--DYSDHMTFLRIYNAFIKLPSHGQSN-FC 846
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS------HNARVPGIIHAVLMAG 912
+ ++S M M++G+R+QL EL K +P S ++ P +I A L+AG
Sbjct: 847 TSNYLSLNAMRMIVGIRQQLFMELQKLRLLPASCRSADDPDFNRYSNSWP-MIQAALVAG 905
Query: 913 LYPMVARLRPPHKNGR-RFVETAG-------GAKVRLHPHSLNF------KLSFKKTDDC 958
YP + R G+ R + T+ G V+ S KL K
Sbjct: 906 SYPNIGFTR---SGGQIRKIRTSNEVASLPYGCAVKRQASSAGMNGMGVGKLG-KPEPVI 961
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDD-DMSDDDADE 1017
+ + E+++ + +R T V PL +LL A + + N+ D+ ++DDD D
Sbjct: 962 EYLAFQELSKTGDNLSLRTVTAVPPLTVLLFAGPVHLKREVLNDYSIGDEFALNDDDVDT 1021
Query: 1018 NESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVA 1077
+ + ++C+ ++ WL F D+ + LR +L
Sbjct: 1022 DSNTDECV-----------------------FALEPWLVFRWKFEDMQLMLKLRVKLMTY 1058
Query: 1078 ILFKVTHPQKA 1088
+F + P ++
Sbjct: 1059 FIFVMKQPDRS 1069
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 108/178 (60%), Gaps = 18/178 (10%)
Query: 221 VPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH 280
VPQF+LE + +I CTQPRR+ +V+ R++ ER E +G +GY IRLE K +
Sbjct: 26 VPQFILEDAAKHQQAVRIFCTQPRRLPVLAVSARVAKERNEKLGSTVGYHIRLEQKTSEQ 85
Query: 281 SSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII 340
+ + +CT+GVLLRLL + + S ++HII+DEIHER++ +D++L +
Sbjct: 86 TVLTYCTSGVLLRLLTN--------------DTNASNISHIILDEIHEREQKTDYLLITL 131
Query: 341 RDMLPSYPHLRLILMSATLDADR--FSQYFGGCPV--IQVPGFTYPVKSFYLEDVLSI 394
R L + LR+ILMSAT++ R F +YFG V + +P + V+ FYL ++L++
Sbjct: 132 RQALKNRDDLRIILMSATMEESRELFRRYFGPGNVFCLDIPSTLHKVEMFYLPEILAL 189
>gi|395530934|ref|XP_003767541.1| PREDICTED: ATP-dependent RNA helicase A [Sarcophilus harrisii]
Length = 1260
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 244/465 (52%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 627 MAQMNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYR 685
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYV+DS + K K + +
Sbjct: 686 ILPLHSQIPREEQRKVFDPVPNGVTKVILSTNIAETSITINDVVYVVDSCKQKVKLFTAH 745
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W S+ + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 746 NNMTNYATVWASRTNLEQRKGRAGRVRPGFCFHLCSRARYDRLETHMTPEMFRTPLHEIA 805
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 806 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 864
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 865 PRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYVHRNFAG--NRFSD 917
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ L+ +GF E +
Sbjct: 918 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILVNSGFPEECL 977
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ N P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 978 MTQVFNNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNC 1032
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1033 PFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1076
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 160/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F++ I + N VV+I G TGCGKT
Sbjct: 362 QISMDLKNELMYQLEQDHDLQAILQEREMLPVKKFENEILRAIHQNSVVIIRGATGCGKT 421
Query: 219 TQVPQFLLEHIW--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQ++L+ ++ C IV TQPRRISA SVAER+S ERGE G + GY +R ES
Sbjct: 422 TQVPQYILDECIQNNRAAECNIVVTQPRRISAVSVAERVSYERGEEPGKSCGYSVRFESV 481
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 482 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 525
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 526 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVFGRTYPVQEYFLEDCIQM 584
>gi|301776997|ref|XP_002923919.1| PREDICTED: ATP-dependent RNA helicase A-like [Ailuropoda melanoleuca]
Length = 1276
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 625 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 683
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 684 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 743
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 744 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 803
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 804 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 862
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 863 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 915
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 916 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 974
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 975 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1029
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1030 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1074
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 157/239 (65%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 360 QISMDLKNELMYQLEQDHDLPAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 419
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 420 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESV 479
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 480 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 523
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 524 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 582
>gi|46136719|ref|XP_390051.1| hypothetical protein FG09875.1 [Gibberella zeae PH-1]
Length = 1420
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 244/490 (49%), Gaps = 50/490 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L ++ I+ LI QL+ +I ++ + AILVFLPG +I D LL +P F
Sbjct: 863 LTQIDEYRIEFDLILQLIAQIAINDQLQDFSKAILVFLPGIAEIRTLNDMLLGDPRF--A 920
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 921 KDWLVYPLHSTIATEDQESAFLVPPPGIRKIVLATNIAETGITIPDVTCVIDTGKHREMR 980
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R L D Q PE+ R+
Sbjct: 981 FDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTKFRHDQLMSDQQTPEMLRLS 1040
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L LDPP + IR A+ L D+ AL+ E++T LG +L
Sbjct: 1041 LQDLAIRVKICKIG-GIEETLGDALDPPSAKNIRRAVDALVDVRALTQTEELTPLGYQLA 1099
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + ++ CLD A+T A + PF+ P ++ +A A+ +
Sbjct: 1100 RLPLDVFLGKLILYGVIFKCLDMAITTAAILSSKSPFSAPF--GQRTQADNARM---AFR 1154
Query: 830 GGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G SD L + A+ WK Q G+E FC + F+S + + ++ QL T L +
Sbjct: 1155 RGDSDLLTIYNAYLAWKRVCQSAGGGGKEFQFCRKNFLSQQTLANIEDLKGQLLTSLADS 1214
Query: 886 GFIP--EDVSSCSHNARVPG------------------------IIHAVLMAGLYPMVAR 919
GF+ E+ AR G + +V+ YP +
Sbjct: 1215 GFLSLTEEERRALSRARFSGGRGRRQQQFYDIPRRVNLNSDNDVVSASVIAWSFYPKILV 1274
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCT 979
P G R + T + LHP S+N + D + Y I + H T
Sbjct: 1275 RDAPGSKGLRNIGT--NQSISLHPSSVN-----RGRLDLRWLSYYHIMQSRAVYHAHEAT 1327
Query: 980 VVGPLPLLLL 989
V P+ LL
Sbjct: 1328 AVEAFPIALL 1337
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 176/284 (61%), Gaps = 35/284 (12%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQ 242
+ R +LP+ F++ + VD NQVV++ GETGCGK+TQVP FLLEH S+G CK+ CT+
Sbjct: 613 QSRMQLPMWHFREQVLEAVDGNQVVIVCGETGCGKSTQVPSFLLEHQLSQGRPCKVYCTE 672
Query: 243 PRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
PRRISA S+A R+S E GEN +G N +GY IRLE+ + + +V+ T G+++R+L
Sbjct: 673 PRRISAISLARRVSEELGENRNDLGTNRSLVGYSIRLEANTSRETRLVYATTGIVMRML- 731
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
E SN D+ +TH+++DE+HER SDF+L +++ +L L+++LMS
Sbjct: 732 --------EGSN-----DLQEVTHLVLDEVHERTIDSDFLLIVLKKLLVRRKDLKVVLMS 778
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPE 416
AT+DADRFS Y GG PV+ VPG T+PV+ YLED + + A ++ + ++ ++DP
Sbjct: 779 ATVDADRFSAYLGGAPVLNVPGRTFPVQVRYLEDAIELTGYAPADS-EPDKMLDLDDDPA 837
Query: 417 LTEENKSTLDEAISLAWSND--------------EFDMLLELVS 446
+E + D + SLA + EFD++L+L++
Sbjct: 838 ESEGENTKSDISKSLASYSSRTKSTLTQIDEYRIEFDLILQLIA 881
>gi|424513312|emb|CCO66896.1| predicted protein [Bathycoccus prasinos]
Length = 1660
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 288/580 (49%), Gaps = 52/580 (8%)
Query: 558 DSEDGAILVFLPGWEDINKTRDRLL-ANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
++ G +L FLPGW++I + + + + DT K I+PLHS VP +Q+ VF
Sbjct: 1065 NNRKGTVLCFLPGWDEIKAATELIRKSTTYNEDTMK--IMPLHSSVPQEEQQAVFTPAKE 1122
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
G KIILSTNIAE+++TIDDV+ VID+G ++E SY+ + +S++++ +S ASA QR+GR
Sbjct: 1123 GTMKIILSTNIAESSVTIDDVLSVIDAGLVREMSYNAESAMSSMETVLISSASATQRSGR 1182
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDP 736
AGR G C+ LYS+ AS+ + PEI+R +E CLQ + I+ FL + LDP
Sbjct: 1183 AGRVAPGSCFRLYSRGVHASMAERPTPEIQRTALEATCLQTAAM-TESGIQRFLSRALDP 1241
Query: 737 PVSVTIRNAIIVLQDIGALSL---DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
P T+ A+ L +GA+ EK+T LG + L + P +++ML + CLDP
Sbjct: 1242 PSEDTVMYAVDRLTKLGAIQTIESGEKLTALGRTISNLPIDPAIARMLLLGCVTKCLDPV 1301
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF----ECWKNAK 849
LT A + RDPF P ++ RA F SD L+V A+ + + N
Sbjct: 1302 LTAAASYSSRDPFYTPPGMRDEARAIRKSFH------DSSDLLSVCRAWDQCNDLFNNRD 1355
Query: 850 QRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARV----PGI- 904
W S F+S M+ L +R QL ++L+K GF+ E RV GI
Sbjct: 1356 YDTARRW-GSDNFISIAAMSNLTSVRSQLLSDLVKLGFVSERDCEGYGQRRVLRYDSGIN 1414
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR------LHPHSLNFKLSFKKTDDC 958
HA A ++A P + RR + G + R LHP + F +
Sbjct: 1415 THANNEALFKGILATGLPSNLAARRSLGAFGTLRTRTESHAGLHPSGVAFHRKPPR-GVA 1473
Query: 959 PL---MVYDEITRGDGGMHVRNCTVVGPLPLLLLAT-EIAVAPAPD---NEDDDEDDDMS 1011
PL VY E+ + +R+ T + P + + A +I+ AP + N+ + DD +
Sbjct: 1474 PLPKWFVYREMVLS-SSVFLRDSTALSPEQVAMFAGHQISFAPKVEEAQNDSTESDDGLL 1532
Query: 1012 DDDADENESDEDCMEIDDKTSGQHGENVMSSP--DKSVT----VVVDRWLYFGSTALDIA 1065
+ D N S + M D G++++ S D+S ++D W++ S D
Sbjct: 1533 NADGSVNASMDIDMSFD-------GDDMVPSSRFDRSAAGRAKFLLDEWVFLDSNCEDTM 1585
Query: 1066 QIYC-LRERLSVAILFKVTHPQKALPPVLEASMYAMASIL 1104
+ RE L++A+ ++V +P+K P E + A+A +L
Sbjct: 1586 DLLRDAREELNMALNWRVMYPRKPPPESSEEIVDAIAQML 1625
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 147/245 (60%), Gaps = 32/245 (13%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC--KIVCTQ 242
R KLPI K+ + +++ VV++SG TG GK+TQ PQ++LE KG KI+ TQ
Sbjct: 655 REKLPIIELKEDMLKALETQSVVVVSGGTGTGKSTQCPQYILEDALRKGRGAETKIIVTQ 714
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLE-----SKGGKHSSIVFCTNGVLLRLLVS 297
PRRI+A SVAER++ ER E IG+++GY++RL S GG ++ F T GVLLR LV
Sbjct: 715 PRRIAAISVAERVAAERCEPIGNSVGYRVRLHGSEPRSIGG---TVQFVTTGVLLRRLVR 771
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
++S ++H+I+DE+HERD +DF+L ++++++ + L++ILMSA
Sbjct: 772 D--------------PEISDVSHVIIDEVHERDINTDFLLVLLKELIQTRRDLKVILMSA 817
Query: 358 TLDADRFSQYFG-------GCPVIQV-PGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
TLDA+ FS+YF P++ V P +PV+ YLED+L +S S + D +
Sbjct: 818 TLDAESFSKYFTMDTDIARQTPLLSVPPKPRHPVELHYLEDILEQTQSDNSRNGDGLGIP 877
Query: 410 VPNED 414
N +
Sbjct: 878 SANSN 882
>gi|346326514|gb|EGX96110.1| ATP-dependent RNA helicase A [Cordyceps militaris CM01]
Length = 1095
Score = 241 bits (614), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 231/448 (51%), Gaps = 45/448 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L+ ++ I+ LI QL+ +I D S AIL+FLPG +I D LL +P F
Sbjct: 639 LSQLDEYQIEFDLIVQLIARIATDEDLQSYSSAILIFLPGIAEIRTLNDMLLGDPRF--A 696
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++++ PLHS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 697 KEWLVYPLHSTIATDDQEAAFLIPPPGMRKIVLATNIAETGITIPDVTCVIDTGKHREMR 756
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H+Y+Q R +L D Q PE+ R+
Sbjct: 757 FDERRQLSRLIDTFISRANAKQRRGRAGRVQKGLCFHMYTQFRHNNLMGDQQTPEMLRLS 816
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L LDPP + IR AI L D+ AL+ E +T LG +L
Sbjct: 817 LQDLAIRVKICKIG-GIEETLGDALDPPSAKNIRRAIDALIDVRALTPGEDLTPLGHQLA 875
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ F + CLD ALTLA + PF+ P + A F A
Sbjct: 876 RLPLDVFLGKLILFGTIFKCLDVALTLAAILSSKSPFSAPFGQRAQADNARAAFRRA--- 932
Query: 830 GGQSDQLAVIAAFECWKNA----KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
SD L V A+ WK G+E FC + F+S ++ + ++ QL L +
Sbjct: 933 --DSDLLTVYNAYLGWKKTCLSNSGVGKEMQFCRKNFLSQQTLSNIEDLKGQLLVSLADS 990
Query: 886 GFIP---EDVSSCS-------------HNARVPGIIH----------AVLMAGLYPMVAR 919
GF+P E+ + S H VPG ++ +V+ YP +
Sbjct: 991 GFLPLTDEERKALSRQRFSGGRGRRQQHFFEVPGRVNMHSDNDVVSASVVAWSFYPKLLV 1050
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLN 947
P G R + + +HP S+N
Sbjct: 1051 RDTPGMKGMRNI--GNNQSISIHPSSVN 1076
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 22/158 (13%)
Query: 243 PRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
PRRI A R S E GEN IG N IGY IRLE+ K + +++ T G+++R+L
Sbjct: 451 PRRI--LEEACRSSAELGENCNDIGTNRSLIGYSIRLEANVSKETRLIYATIGIVMRML- 507
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
E SN D+ +TH+++DE+HER SDF+L +++ ++ L+++LMS
Sbjct: 508 --------EGSN-----DLKDITHLVLDEVHERSIDSDFLLIVLKRLMIQRKDLKVVLMS 554
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
AT+DADRFS Y GG P++ VPG T+PV+ YLED + +
Sbjct: 555 ATVDADRFSAYLGGAPILNVPGRTFPVEVRYLEDAIEL 592
>gi|291415218|ref|XP_002723851.1| PREDICTED: ATP-dependent RNA helicase A [Oryctolagus cuniculus]
Length = 1260
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 624 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNAHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D T++ A+ + +PF NE KR A SD
Sbjct: 862 PRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMSGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 160/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ +++ER+ LP+ F++ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDQDLQSVLQERTLLPVKKFENEILDAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ G C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQSGRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|342878965|gb|EGU80242.1| hypothetical protein FOXB_09169 [Fusarium oxysporum Fo5176]
Length = 1488
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/494 (31%), Positives = 244/494 (49%), Gaps = 50/494 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ I+ LI QL+ +I +D AILVFLPG +I D LL +P F
Sbjct: 928 LAQIDEYRIEFDLILQLIAQIAVDEHLQNFSKAILVFLPGIAEIRTLNDMLLGDPRF--A 985
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + Q+ F PP G RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 986 KDWLVYPLHSTIATEDQESAFLVPPSGIRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1045
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R L D Q PE+ R+
Sbjct: 1046 FDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTKFRHDQLMSDQQTPEMLRLS 1105
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L LDPP + IR A+ L D+ AL+ E++T LG +L
Sbjct: 1106 LQDLAIRVKICKIG-GIEETLGDALDPPSAKNIRRAVDALVDVRALTQAEELTPLGHQLA 1164
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + ++ CLD A+T A + PF+ P ++ +A A+ +
Sbjct: 1165 RLPLDVFLGKLILYGVIFKCLDMAITSAAILSSKSPFSAPF--GQRTQADNARM---AFR 1219
Query: 830 GGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
G SD L + A+ WK Q G+E FC + F+S + + ++ QL T L +
Sbjct: 1220 RGDSDLLTIYNAYLAWKRVCQSAGGGGKEFQFCRKNFLSQQTLANIEDLKGQLLTSLADS 1279
Query: 886 GFIP--EDVSSCSHNARVPG------------------------IIHAVLMAGLYPMVAR 919
GF+ ED AR G + +V+ YP +
Sbjct: 1280 GFLSLTEDERRALSRARFSGGRGRRQQQFYDIPRRVNLNSDNDVVSASVIAWSFYPKILV 1339
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCT 979
P G R + T + LHP S+N + D + Y I + H T
Sbjct: 1340 RDVPGSKGLRNIGT--NQSISLHPSSVN-----RGRHDLRWLSYYHIMQSRAVYHAHEAT 1392
Query: 980 VVGPLPLLLLATEI 993
V + LL ++
Sbjct: 1393 AVEAFAIALLCGDV 1406
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 187/289 (64%), Gaps = 35/289 (12%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
+ +++ R +LP+ +F++ + + VD NQV+++ GETGCGK+TQVP FLLEH S+G+ CK
Sbjct: 673 FQMMLQSRMQLPMWNFREQVLTAVDENQVIIVCGETGCGKSTQVPSFLLEHQLSQGKPCK 732
Query: 238 IVCTQPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVL 291
+ CT+PRRISA S+A R+S E GEN +G N +GY IRLE+ + + +V+ T G++
Sbjct: 733 VYCTEPRRISAISLARRVSEELGENRNDLGTNRSLVGYSIRLEANTSRETRLVYATTGIV 792
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
+R+L E SN D+ +TH+++DE+HER SDF+L +++ +L L+
Sbjct: 793 MRML---------EGSN-----DLQEVTHLVLDEVHERSIDSDFLLIVLKKLLIRRKDLK 838
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVP 411
++LMSAT+DADRFS Y GG PV+ VPG T+PV+ YLED + + ++ + ++
Sbjct: 839 VVLMSATVDADRFSAYLGGAPVLNVPGRTFPVQVRYLEDAVELTGYTPADS-EPDKMVDL 897
Query: 412 NEDPELTE-EN-KSTLDEAIS---------LAWSND---EFDMLLELVS 446
++DP +E EN KS + +++S LA ++ EFD++L+L++
Sbjct: 898 DDDPAESEGENTKSDISKSLSGYTARTRSTLAQIDEYRIEFDLILQLIA 946
>gi|281337823|gb|EFB13407.1| hypothetical protein PANDA_013142 [Ailuropoda melanoleuca]
Length = 1155
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 625 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 683
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 684 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 743
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 744 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 803
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 804 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 862
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 863 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 915
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 916 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 974
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 975 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1029
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1030 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1074
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 157/239 (65%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 360 QISMDLKNELMYQLEQDHDLPAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 419
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 420 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESV 479
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 480 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 523
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 524 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 582
>gi|429847559|gb|ELA23151.1| ATP dependent RNA [Colletotrichum gloeosporioides Nara gc5]
Length = 1490
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 243/499 (48%), Gaps = 58/499 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ ID LI QL+ K+ D+E AILVFLPG +I D L + F
Sbjct: 927 LAQMDEYRIDFDLIVQLIAKVASDTEYTAYSKAILVFLPGIAEIRTLNDLLSGDASF--A 984
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
S ++I PLHS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 985 SNWLIYPLHSTIATEDQEAAFLVPPPGFRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1044
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+HL+++ R SL D Q PE+ R+
Sbjct: 1045 FDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHLFTKHRHDSLMSDQQTPEMLRLS 1104
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L + LDPP + IR A+ L D+ AL+ E +T LG +L
Sbjct: 1105 LQDLAIRVKICKIG-GIEETLSEALDPPSAKNIRRAVDALIDVRALTPAEDLTPLGHQLA 1163
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD A+T+A + PF+ P +RA A +
Sbjct: 1164 RLPLDVFLGKLILMGAIFKCLDMAITVAAILSSKTPFSAPFG----QRAQADIVRMG-FR 1218
Query: 830 GGQSDQLAVIAAFECWKNAKQR-----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L + A+ WK Q G++ FC + F+S + + ++ QL +
Sbjct: 1219 RGDSDLLTIYNAYLAWKRVCQSTSASGGKDFQFCRKNFLSQQTLANIEDLKGQLLVSVAD 1278
Query: 885 NGF------------------------------IPEDVSSCSHNARVPGIIHAVLMAGLY 914
+GF IP V++ S N I AV+ Y
Sbjct: 1279 SGFLQLTDNERRALNRLRYGANSRGRRHQNFFDIPHRVNNNSEN---DAITTAVIAWSFY 1335
Query: 915 PMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH 974
P + P G R V + LHP S+N K ++ M Y I + H
Sbjct: 1336 PKLLVRDNPGSRGLRNV--GNNQSISLHPSSVN-----KGHNEIKWMSYYHIMQSKSVYH 1388
Query: 975 VRNCTVVGPLPLLLLATEI 993
T P + LL ++
Sbjct: 1389 AHETTAADPFAIALLCGDV 1407
Score = 202 bits (515), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 155/233 (66%), Gaps = 20/233 (8%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
+++ SR + +++ R +LP+ +FK +T VD QVV+I GETGCGK+TQ P FL
Sbjct: 660 QNIWSRKSSTPRYQAMLQSRMQLPMWNFKQQVTDAVDREQVVIICGETGCGKSTQTPAFL 719
Query: 226 LEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGK 279
LEH S+G+ CKI CT+PRRISA S+A+R+S E GEN GD +GY IRLE+ +
Sbjct: 720 LEHQLSQGKPCKIYCTEPRRISAISLAKRVSEELGENRGDVGTNRSLVGYSIRLEANTSR 779
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
+ +V+ T G+++R+L E SN D+ +TH+++DE+HER SDF+L I
Sbjct: 780 ETRLVYATTGIVMRML---------EGSN-----DLREVTHLVLDEVHERSIDSDFLLII 825
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
++ +L L+++LMSAT+DA+RFS+Y GG PV+ VPG T+PV+ YLED +
Sbjct: 826 LKKLLLRRKDLKVVLMSATVDAERFSKYLGGAPVLTVPGRTFPVQVRYLEDAI 878
>gi|400592899|gb|EJP60938.1| helicase associated domain-containing protein [Beauveria bassiana
ARSEF 2860]
Length = 1464
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 247/496 (49%), Gaps = 50/496 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L+ ++ ID L+ QL+ +I D + AILVFLPG +I D LL +P F
Sbjct: 904 LSQLDEYQIDFELVVQLIARIATDEDLQAYSNAILVFLPGIAEIRTLNDMLLGDPRF--A 961
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + Q+ F PP G RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 962 KDWLVYPLHSTIATDDQESAFLIPPRGMRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1021
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H+Y++ R +L D Q PE+ R+
Sbjct: 1022 FDERRQLSRLIDTFISRANAKQRRGRAGRVQKGLCFHMYTRFRHNNLMSDQQTPEMLRLS 1081
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L LDPP + IR AI L D+ AL+ E +T LG +L
Sbjct: 1082 LQDLAIRVKICKIG-GIEETLGDALDPPSAKNIRRAIDALVDVRALTPGEDLTPLGHQLA 1140
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ F + CLD ALTLA + PF+ P ++ A A+ A+
Sbjct: 1141 RLPLDVFLGKLILFGTVFKCLDVALTLAAILSSKSPFSAPF--GQRNLADNAR---AAFR 1195
Query: 830 GGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
SD L V A+ WK Q G+E FC + F+S ++ + ++ QL L +
Sbjct: 1196 RADSDLLTVYNAYLGWKKTCQSNSGIGKEMQFCRKNFLSQQTLSNIEDLKGQLLVSLADS 1255
Query: 886 GFIP---EDVSSCS-------------HNARVPGIIH----------AVLMAGLYPMVAR 919
GF+P E+ + S H +PG ++ +V+ YP +
Sbjct: 1256 GFLPLTDEERKALSRQRFSGGRGRRQQHFFEIPGRVNMHSDNDVVSASVIAWSFYPKLLV 1315
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCT 979
P G R + + +HP S+N + D + Y I + T
Sbjct: 1316 RDTPGMKGMRNI--GNNQSISIHPSSVN-----RDHLDIKWLSYYHIMQSKTVYRAHETT 1368
Query: 980 VVGPLPLLLLATEIAV 995
P + LL ++ +
Sbjct: 1369 AADPFAIALLCGDVRI 1384
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 143/216 (66%), Gaps = 20/216 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R +LP+ FK + V SNQVV++ GETGCGK+TQVP FLLE+ G CKI CT+PR
Sbjct: 656 RMQLPMWDFKVQVLEAVASNQVVIVCGETGCGKSTQVPSFLLENELCNGRHCKIYCTEPR 715
Query: 245 RISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A R+S E GEN IG N IGY IRLE+ K + +++ T G+++R+L
Sbjct: 716 RISAISLARRVSEELGENRNDIGTNRSLIGYSIRLEASVTKETRLIYATIGIVMRML--- 772
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
E SN D+ +TH+I+DE+HER SDF+L +++ ++ L+++LMSAT
Sbjct: 773 ------EGSN-----DLKEVTHLILDEVHERSIDSDFLLIVLKRLMLQRKDLKVVLMSAT 821
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+DADRFS Y GG P++ VPG TYPV+ YLED + +
Sbjct: 822 VDADRFSAYLGGAPILNVPGRTYPVEVRYLEDAIEL 857
>gi|146078128|ref|XP_001463466.1| putative RNA helicase [Leishmania infantum JPCM5]
gi|134067552|emb|CAM65831.1| putative RNA helicase [Leishmania infantum JPCM5]
Length = 1234
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 256/503 (50%), Gaps = 62/503 (12%)
Query: 535 LATVNPELIDLVLIEQLLRKI-CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
LA +N ++++ LIE ++ I GA+LVFLPG +I + ++L NP R
Sbjct: 584 LARMNYDVVNYELIEYIVEYIDTTLRAPGAVLVFLPGMAEIQRCLEQLKLNP--RLAKSC 641
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+ LHS + S +Q+ VF+RPP G RK+IL TNI ET+ITIDD VYVID+G+ KE Y+
Sbjct: 642 LFYNLHSSLGSSEQQGVFRRPPAGKRKVILGTNIMETSITIDDAVYVIDTGKAKENRYNA 701
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
++S L + +SKA+ +QR GRAGR Q G C+ L+++ + + D Q+ E+ R+P+E L
Sbjct: 702 RKSLSELVTVNISKANCRQRQGRAGRVQEGFCFRLFTEAQFEAFDDHQLCEMHRVPLESL 761
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ+ L +E +LQK L PP I +++ VL +GAL++++++T LG+ L L +
Sbjct: 762 ILQIYALHLGDEVE-YLQKALTPPEERAIHSSVKVLTTLGALTVEKRLTSLGQHLANLPL 820
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
+ KM+ L+ C+DP LT+A R PF + + F +L S
Sbjct: 821 DVRVGKMIIHGALLQCIDPVLTMAACLATRSPFIASVDFRTEVENMRRAFAGETL----S 876
Query: 834 DQLAVIAAFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
DQL+ A+ W + +Q+G A C YF+S + + ++Q + L + GF+
Sbjct: 877 DQLSSWFAYNKWVSVLQQKGTAAARKVCEDYFLSPATLKQIQSTKRQYERYLYEAGFL-- 934
Query: 891 DVSSCSH----------------------------NARVPGIIHAVLMAGLYPMVARLRP 922
D + SH N+ I A L+AGLYP VA++R
Sbjct: 935 DSAPSSHMSPSKFIFPPFTTLDDRIFEAGGQHFNENSTSTRCILACLVAGLYPNVAQMR- 993
Query: 923 PHKNGRRFV-------------ETAGGAKVRLHPHSLNFK-LSFKKTDDCPLMVYDEITR 968
G R V T G++ +HP S+ K SF PL+VY + +
Sbjct: 994 -MSRGSRSVGGGNCSRRHTVKFTTFDGSECLVHPSSVASKETSFAS----PLLVYVDKVK 1048
Query: 969 GDGGMHVRNCTVVGPLPLLLLAT 991
+R +VV PL ++L +
Sbjct: 1049 TSATF-LREVSVVAPLHVILFGS 1070
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 150/239 (62%), Gaps = 19/239 (7%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S A + + ++S +++ + +LR+ R LP S ++ + + + + V+I GETG
Sbjct: 297 VSDAALDVTLKSSWEKLKTEGSLRK---ARDSLPAHSVRETLRAALQKHNAVVIGGETGS 353
Query: 216 GKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQ+PQFL E + +G + IVCTQPRR++ATSVA R++ ER E +G +GY IRL
Sbjct: 354 GKTTQIPQFLYEFMCEEGHGSSANIVCTQPRRLAATSVALRVAEERDEAVGGTVGYSIRL 413
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
E+ K + I +CT G++LR L + + ++H++VDEIHER +
Sbjct: 414 ENCVSKKTQITYCTTGIVLRRLQTDKY--------------LGRVSHVVVDEIHERGADT 459
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
DF+L ++RD++ L+++LMSAT+D++ F++YF G PVI + G T+PVK +LE ++
Sbjct: 460 DFLLILLRDLVRRRQDLKVVLMSATMDSELFARYFDGAPVISIAGRTFPVKVMHLEQII 518
>gi|328865996|gb|EGG14382.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
Length = 1465
Score = 240 bits (613), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 233/453 (51%), Gaps = 53/453 (11%)
Query: 538 VNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIP 597
+N E I+ +LI +++ + +ILVF+PG DI DRL +S ++P
Sbjct: 871 INAEFIEKLLIYLARQEL---GKRKSILVFVPGMGDILNICDRLNNCSM---SSSMWVLP 924
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS + Q++VF+R P KI+++TNIAET+ITIDDV V+D+GR + +Y+P
Sbjct: 925 LHSSLTPKDQQRVFERAPADRVKIVVATNIAETSITIDDVSIVVDTGRANQVNYNPITKN 984
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
S + S+VSKA+ +QRAGRAGR AG CYHLY++ + D + PEI R P+++LCL V
Sbjct: 985 SMMGESFVSKAAIRQRAGRAGRTSAGTCYHLYTRAMESQFDDQETPEILRTPLQQLCLHV 1044
Query: 718 KLLDPNCN----------IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD---EKVTEL 764
KL + N IE FL + PP + +I+ AI L+ + A+ + E++T L
Sbjct: 1045 KLFQTDMNNTAAGGKVNKIESFLSNAIQPPSTESIKAAIEELESVNAIEVQDGGERLTPL 1104
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE 824
G L L V + KML F + C+DP LT+A Y+ PF IS +K+ K+
Sbjct: 1105 GYHLAQLPVDIYIGKMLLFGCIFRCIDPILTIAATLSYKTPF---ISGADKRDKPQVKYG 1161
Query: 825 LASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
+G QSD A++ W+ A + G E FC + ++ + + ++ Q L +
Sbjct: 1162 ----HGLQSDHFTFAIAYDHWRKAIKDGNEFSFCKENGLALSTLKTIQDLKIQFAEILSE 1217
Query: 885 NGFIPEDVSSCS-----------------------HNARVPGIIHAVLMAGLYPMVARLR 921
GF+P +++ S N I+ +VL AG+YP + R+
Sbjct: 1218 IGFLPSNITQRSIQKEQKLNRGSDGIVESVGALFNSNGGDQKILKSVLCAGMYPKIGRID 1277
Query: 922 PPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
P +V TAGGA H +N K+ K+
Sbjct: 1278 VPPTT---YVSTAGGAIANKH-DPMNLKILTKR 1306
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 139/219 (63%), Gaps = 19/219 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCTQ 242
R LP+ S K ++ NQ+V+++GETG GK+TQ+PQ+++E KG C I+CTQ
Sbjct: 612 RESLPVYSKKQQFIDLLERNQIVVVTGETGSGKSTQIPQYIMESFVKNGKGSNCNIICTQ 671
Query: 243 PRRISATSVAERISVE----RGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
PRRISA VA+R+S E + + G ++GY+IR ESK +++ ++FCT G+LLR++V
Sbjct: 672 PRRISAIGVADRVSFEWSGGQKDQTGQHVGYQIRNESKRSRNTRLLFCTTGILLRMMV-- 729
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G R D +S ++HIIVDE+HER +DF+L I+R ++ L++ILMSAT
Sbjct: 730 GGER---------GDMLSGVSHIIVDEVHERSVDNDFLLIILRALVKKRRDLKVILMSAT 780
Query: 359 LDADRFSQYFG--GCPVIQVPGFTYPVKSFYLEDVLSIL 395
LDA+ + YF + V GFT+PV YLED + ++
Sbjct: 781 LDAELIANYFSIKKDSIFAVAGFTHPVSHVYLEDSIRMI 819
>gi|328861604|gb|EGG10707.1| hypothetical protein MELLADRAFT_115470 [Melampsora larici-populina
98AG31]
Length = 1615
Score = 240 bits (613), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 157/491 (31%), Positives = 249/491 (50%), Gaps = 47/491 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICM------DSEDGAILVFLPGWEDINKTRDRLLANPFFR 588
L ++ I++ LI LL +IC+ S A LVFLP + I K + L ++ F
Sbjct: 1027 LEVLDEHQINMDLILLLLEQICLHNPSLVQSFSNATLVFLPSLDTIRKLTEILESHAVF- 1085
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
T+ F I PLHS + + Q VF+ PPPG RKI++STNIAET ITI DV VIDSG+ +E
Sbjct: 1086 GTAAFQIFPLHSTISNENQGLVFQTPPPGVRKIVISTNIAETGITIPDVTCVIDSGKHRE 1145
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKR 707
YD +S L ++++K++A QR GRAGR Q GIC+HL+++ R + + +PE+ R
Sbjct: 1146 MRYDEKRQISRLVETFIAKSNATQRKGRAGRVQEGICFHLFTKHRMETQFAENPLPEMLR 1205
Query: 708 IPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ +++L L++K++ +I+D L+K LDPP +V ++ AI L ++ AL+L+E +T LG
Sbjct: 1206 LSLQDLALRIKIMKIGTSIKDVLRKALDPPSTVNVQRAIASLVEVKALTLNEDITPLGRH 1265
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L + M K+L L CL PALT+A A + + PF P ++ F++ +
Sbjct: 1266 LVKLPMDVHMGKLLILGCLFRCLSPALTVAAALNSKSPFLTPFGREQEADTIKRSFKVEN 1325
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
SD L + + W+NA FC + +S + + +R Q L+ GF
Sbjct: 1326 -----SDFLTICNVYNTWRNAFHNDNVHQFCRKNMLSHQNLMQIEELRIQFFGFLLDAGF 1380
Query: 888 I------------------PEDVSSCSHNARVPGIIHAVLMAGLYPMV------ARLRPP 923
I P D + S + +V + + A ++P + ++L
Sbjct: 1381 IGVQNDSRNYHGRGKFCTVPRDFDTNSQDTKV---VMGCVAAAMFPKLLIRDNSSQLTQT 1437
Query: 924 HKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD--DCPLMVYDEITRGDGGMHVRNCTVV 981
H R +A + +HP S+NF ++ D D + Y I + ++V VV
Sbjct: 1438 HGAWRTLTNSAPAS---IHPSSVNFTTG-RRPDFGDAKFVTYFNIMQSK-KLYVWESGVV 1492
Query: 982 GPLPLLLLATE 992
+ LL E
Sbjct: 1493 DEKAIFLLCGE 1503
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 142/216 (65%), Gaps = 20/216 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R+ LPI+ ++ I T++ NQVV++ GETGCGK+TQ+P F+LEH S+G KI CT+PR
Sbjct: 762 RASLPIAVYRSSIIQTIEQNQVVVLCGETGCGKSTQLPAFILEHELSRGRPVKIFCTEPR 821
Query: 245 RISATSVAERISVERGE------NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E GE +G +GY IRLESK + +V+ T G++LR+L
Sbjct: 822 RISAISLAQRVSQELGEPTGAVGQLGSLVGYNIRLESKTSPTTRLVYATTGIVLRML-EN 880
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G D+ +TH+IVDE+HER D +L + +L P LRLILMSAT
Sbjct: 881 GT-------------DLHDITHLIVDEVHERSIDGDCLLLALLTVLERRPTLRLILMSAT 927
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+DA++ S Y GCP+++VPG T+PV SF+LEDV+ +
Sbjct: 928 VDAEKISNYMNGCPILKVPGRTFPVTSFFLEDVIEL 963
>gi|312383889|gb|EFR28785.1| hypothetical protein AND_02818 [Anopheles darlingi]
Length = 938
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 217/409 (53%), Gaps = 19/409 (4%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
LI +LL I DGAILVFLP I+ + +P ++ + PLHS +P+ +
Sbjct: 532 LIVELLYYITCAKPDGAILVFLPSVMQISDIFKLIHDHPQL-SKARLAVYPLHSKIPTAE 590
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q VF RPP G RKIILSTNIAET+ITIDDVVYV+++GR K Y+ N VS L+ W+S
Sbjct: 591 QTAVFDRPPAGTRKIILSTNIAETSITIDDVVYVVNAGRHKLNMYE--NGVSALRDEWIS 648
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
++ QR GRAGR Q GICYHLYS+ R + + PEI R+ ++E+ L +K+L
Sbjct: 649 LSNEIQRKGRAGRVQEGICYHLYSRGRRRTFLENVPPEILRVALDEVILNIKILRLG-EA 707
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
F+ + LD P I ++ +L + A+ D+K+T LG L L + P KM+ A +
Sbjct: 708 RTFMDRLLDKPSEEVIEESLQLLNRLNAIDDDQKLTPLGYHLARLPMDPRTGKMVLLASI 767
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
C+DP ++A + +++ F P+ ++ +F G SD + + + W+
Sbjct: 768 FSCVDPITSIAASLSFKNAFYKPLGKEKEVDRIRRRFA----DGIASDHIMLARVIDEWR 823
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG--- 903
R A FC + F+++ + L M++Q L F+P N R G
Sbjct: 824 GQSNR---AGFCHRNFLNNATLQQLSNMKRQFCEYLHGARFLPSIGCDAPENNRHTGSNE 880
Query: 904 IIHAVLMAGLYPMVARLRPPHK-----NGRRFVETAGGAKVRLHPHSLN 947
++ A++ AGLYP VA +R + +GR + G + +HP S+N
Sbjct: 881 LLAAIVGAGLYPNVAFVRKVIRSRNSPDGRAILSIEGQGRAEIHPSSVN 929
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 156/236 (66%), Gaps = 19/236 (8%)
Query: 166 ESLTSRIEK-DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
E L E+ D + ++ E R KLP + + + ++ +QV+L+ GETG GKTTQVPQ+
Sbjct: 249 EELYEEFERSDRSTHRLSEFRRKLPAYASRSEVLDMIERHQVILVKGETGSGKTTQVPQY 308
Query: 225 LLEH--IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS- 281
+LE + G C+++CTQPRRISA ++A R++ ER E +G ++GY+IRLE++ + +
Sbjct: 309 ILEEASLRMAGSRCRVLCTQPRRISAITLARRVAEERSERLGRSVGYQIRLEAERPRTNG 368
Query: 282 -SIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII 340
SI+FCT G++L ++ S + L+E S H+++DEIHERD +D +LAII
Sbjct: 369 GSIMFCTTGIVLTIMQSDPL--LREYS------------HLVLDEIHERDVITDLLLAII 414
Query: 341 RDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
R +LP LR+ILMSATL A+ FS YF CP++++ G T+PV+ +YLEDVL LK
Sbjct: 415 RMVLPYRKDLRVILMSATLTAETFSAYFNNCPMVEIRGITFPVREYYLEDVLKELK 470
>gi|380495455|emb|CCF32381.1| helicase associated domain-containing protein [Colletotrichum
higginsianum]
Length = 1479
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 244/500 (48%), Gaps = 60/500 (12%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANP-FFRD 589
LA ++ ID LI QL+ K+ DSE AILVFLPG +I D L +P F RD
Sbjct: 917 LAQMDEYRIDFDLIVQLIGKVASDSEYVAYSKAILVFLPGIAEIRTLNDLLSGDPSFARD 976
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
++I PLHS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 977 ---WLIYPLHSTIATEDQEAAFLVPPPGMRKIVLATNIAETGITIPDVTCVIDTGKHREM 1033
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRI 708
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R + + D Q PE+ R+
Sbjct: 1034 RFDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTKHRHDTIMSDQQTPEMLRL 1093
Query: 709 PIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
+++L ++VK+ IE+ L + LDPP + IR A+ L D+ AL+ E +T LG +L
Sbjct: 1094 SLQDLAIRVKICKIG-GIEETLSEALDPPSAKNIRRAVDALIDVRALTPAEDLTPLGNQL 1152
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L + + K++ + CLD A+T+A + PFT P +RA A
Sbjct: 1153 ARLPLDVFLGKLILMGAIFKCLDMAITVAAILSSKSPFTAPFG----QRAQ-ADLVRKGF 1207
Query: 829 YGGQSDQLAVIAAFECWKNAKQR-----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
G SD L V A+ WK Q G++ FC + F+S + + ++ QL +
Sbjct: 1208 RRGDSDLLTVYNAYLAWKRVCQSTSASGGKDFQFCRKNFLSQQTLANIEDLKGQLLVSVA 1267
Query: 884 KNGF------------------------------IPEDVSSCSHNARVPGIIHAVLMAGL 913
+GF IP+ VS S N I AV+
Sbjct: 1268 DSGFLLLTDDERRALNRLRYGANSRGRRHQNFFDIPQRVSINSEN---DAITTAVVAWSF 1324
Query: 914 YPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
YP + P G R V + LHP S+N K ++ + Y I +
Sbjct: 1325 YPKLLVRDNPGSRGLRNV--GNNQSITLHPSSVN-----KGHNELKWLSYYHIMQSKSVY 1377
Query: 974 HVRNCTVVGPLPLLLLATEI 993
H T P + LL ++
Sbjct: 1378 HAHETTAADPFAIALLCGDV 1397
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 146/218 (66%), Gaps = 20/218 (9%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+++ R +LP+ +FK +T VD QVV+I GETGCGK+TQVP FLLEH ++G+ CKI C
Sbjct: 664 MLQSRMQLPMWNFKQQVTDAVDREQVVIICGETGCGKSTQVPAFLLEHQLAQGKACKIYC 723
Query: 241 TQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A R+S E GE D +GY IRLE+ + + +VF T G+++R+
Sbjct: 724 TEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVMRM 783
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L E SN D+ +TH+++DE+HER SDF+L I++ +L L+++L
Sbjct: 784 L---------EGSN-----DLREVTHLVLDEVHERSIDSDFLLIILKKLLLRRQDLKVVL 829
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
MSAT+DA+RFS Y GG PV+ VPG T+PV+ YLED +
Sbjct: 830 MSATVDAERFSNYLGGAPVLTVPGRTFPVQVRYLEDAI 867
>gi|398010984|ref|XP_003858688.1| RNA helicase, putative [Leishmania donovani]
gi|322496898|emb|CBZ31968.1| RNA helicase, putative [Leishmania donovani]
Length = 1234
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/505 (32%), Positives = 259/505 (51%), Gaps = 66/505 (13%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE---DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
LA +N ++++ LIE ++ I D++ GA+LVFLPG +I + ++L NP R
Sbjct: 584 LARMNYDVVNYELIEYIVEYI--DTKLRAPGAVLVFLPGMAEIQRCLEQLKLNP--RLAK 639
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ LHS + S +Q+ VF+RPP G RK+IL TNI ET+ITIDD VYVID+G+ KE Y
Sbjct: 640 SCLFYNLHSSLGSSEQQGVFRRPPAGKRKVILGTNIMETSITIDDAVYVIDTGKAKENRY 699
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ ++S L + +SKA+ +QR GRAGR Q G C+ L+++ + + D Q+ E+ R+P+E
Sbjct: 700 NARKSLSELVTVNISKANCRQRQGRAGRVQEGFCFRLFTEAQFEAFDDHQLCEMHRVPLE 759
Query: 712 ELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
L LQ+ L +E +LQK L PP I +++ VL +GAL++++++T LG+ L L
Sbjct: 760 SLILQIYALHLGDEVE-YLQKALTPPEERAIHSSVKVLTTLGALTVEKRLTSLGQHLANL 818
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGG 831
+ + KM+ L+ C+DP LT+A R PF + + F +L
Sbjct: 819 PLDVRVGKMIIHGALLQCIDPVLTMAACLATRSPFIASVDFRTEVENMRRAFAGETL--- 875
Query: 832 QSDQLAVIAAFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
SDQL+ A+ W + +Q+G A C YF+S + + ++Q + L + GF+
Sbjct: 876 -SDQLSSWFAYNKWVSVLQQKGTAAARKVCEDYFLSPATLKQIQSTKRQYERYLYEAGFL 934
Query: 889 PEDVSSCSH----------------------------NARVPGIIHAVLMAGLYPMVARL 920
D + SH N+ I A L+AGLYP VA++
Sbjct: 935 --DSAPSSHMSPSKFIFPPFTTLDDRIFEAGGQHFNENSTSTRCILACLVAGLYPNVAQM 992
Query: 921 RPPHKNGRRFV-------------ETAGGAKVRLHPHSLNFK-LSFKKTDDCPLMVYDEI 966
R G R V T G++ +HP S+ K SF PL+VY +
Sbjct: 993 R--MSRGSRSVGGGNCSRRHTVKFTTFDGSECLVHPSSVASKETSFAS----PLLVYVDK 1046
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLAT 991
+ +R +VV PL ++L +
Sbjct: 1047 VKTSATF-LREVSVVAPLHVILFGS 1070
Score = 183 bits (464), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 150/239 (62%), Gaps = 19/239 (7%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S A + + ++S +++ + +LR+ R LP S ++ + + + + V+I GETG
Sbjct: 297 VSDAALDVTLKSSWEKLKTEGSLRK---ARDSLPAHSVRETLRAALQKHNAVVIGGETGS 353
Query: 216 GKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQ+PQFL E + +G + IVCTQPRR++ATSVA R++ ER E +G +GY IRL
Sbjct: 354 GKTTQIPQFLYEFMCEEGHGSSANIVCTQPRRLAATSVALRVAEERDEAVGGTVGYSIRL 413
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
E+ K + I +CT G++LR L + + ++H++VDEIHER +
Sbjct: 414 ENCVSKKTQITYCTTGIVLRRLQTDKY--------------LGRVSHVVVDEIHERGVDT 459
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
DF+L ++RD++ L+++LMSAT+D++ F++YF G PVI + G T+PVK +LE ++
Sbjct: 460 DFLLILLRDLVRRRQDLKVVLMSATMDSELFARYFDGAPVISIAGRTFPVKVMHLEQII 518
>gi|407406879|gb|EKF30965.1| RNA helicase, putative [Trypanosoma cruzi marinkellei]
Length = 1307
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 264/493 (53%), Gaps = 53/493 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKI-CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
++ +N ++I+ LIE ++ I + +GA+L+FLPG +I + ++L +NP R
Sbjct: 657 ISRMNLDVINYELIENVVFYIDTVMKIEGAVLIFLPGMAEILRCMEQLKSNP--RLLHSC 714
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
++ LHS + S +Q VF+RPP G RK+++ TNI ET+ITIDD V+VIDSG+ KE YD
Sbjct: 715 LMYNLHSSLGSSEQHGVFQRPPKGKRKVVIGTNIMETSITIDDAVFVIDSGKAKENRYDA 774
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
++S L + VSKA+ +QR GRAGR + G C+ L++ + +L D Q+ E+ R+P+E L
Sbjct: 775 RKSLSQLVTVNVSKANCRQRQGRAGRVREGFCFRLFTTAQFEALDDHQLCEMHRVPLEGL 834
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ+ L+ +E +LQK L PP +R ++ VL +GAL+ D+++T LG+ L L +
Sbjct: 835 ILQIYSLNLGDEVE-YLQKALSPPQERAVRGSVKVLTTLGALTWDKRLTSLGQHLANLPL 893
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEK----KRATAAKFELASLY 829
+ KM+ ++ C+DP LT+A R+PF + + +RA A ++
Sbjct: 894 DVRIGKMIIHGAILHCVDPVLTIAACLAVRNPFLSMMDYQTEVEGVRRAFAGEY------ 947
Query: 830 GGQSDQLAVIAAFECWKNAK-QRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L A+ W + G A C++Y++S + + ++Q + L + G
Sbjct: 948 --MSDHLVSWFAYASWVFVQYNEGSSAAKKLCARYYLSLPALKQIQSTKRQYERYLYEAG 1005
Query: 887 FIPEDVSSCSH-------------------------NARVPGIIHAVLMAGLYPMVARLR 921
FI E SH NA I + ++AGLYP +AR++
Sbjct: 1006 FIEETPLYSSHERFLYDPVITLEDRLYESGGKQFNANAGSVKCILSCVVAGLYPNIARVQ 1065
Query: 922 P-PHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVY-DEITRGDGGMHVRN 977
K G F++ T G++V +HP S+ K +K PL+VY D+I +R+
Sbjct: 1066 TGASKKGGTFLKMTTFDGSEVMIHPSSVVGK---EKKFLSPLLVYVDKIK--TSATFLRD 1120
Query: 978 CTVVGPLPLLLLA 990
+VV PL ++L +
Sbjct: 1121 VSVVTPLHVILFS 1133
Score = 186 bits (471), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 142/213 (66%), Gaps = 16/213 (7%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQ 242
R +LP ++ + + +QVV+I GETG GKTTQ+PQ+L E + G + IVCTQ
Sbjct: 396 REQLPAFQIREELREILSKHQVVVIGGETGSGKTTQIPQYLYEFMCESGMGGSANIVCTQ 455
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRR++ATSVA R++ ER E +G +GY IRLES + + I +CT G++LR R
Sbjct: 456 PRRLAATSVALRVAEERDEAVGGVVGYTIRLESCVSRRTQITYCTTGIVLR--------R 507
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
L+ + + +++HI+VDEIHER +DF+L ++RD++ L+++LMSAT+D++
Sbjct: 508 LQ------VEKFLGSVSHIVVDEIHERGVDTDFLLILLRDLIQRRSDLKVVLMSATMDSE 561
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
F++YFGG PVI + G TYPV+ F+LE+++ ++
Sbjct: 562 LFARYFGGAPVISIQGRTYPVQLFHLEEIIPMV 594
>gi|380020062|ref|XP_003693917.1| PREDICTED: LOW QUALITY PROTEIN: dosage compensation regulator-like
[Apis florea]
Length = 1239
Score = 240 bits (612), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 244/464 (52%), Gaps = 20/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A ++ + I LIE LL+ I S GAIL+FLPGW I L +P + S +V
Sbjct: 621 MAQLSEKEISFELIEALLKYINDQSIPGAILIFLPGWNLIFALMKHLQQHPVYGGLS-YV 679
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS +P Q+KVF P G KIIL+TNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 680 IIPLHSQLPREDQRKVFDPVPSGITKIILATNIAETSITINDVVYVIDSCKAKMKLFTSH 739
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFNKMDEHMTPEMFRTPLHELA 799
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL K ++PP + A ++L+++ L + ++T LG+ L L +
Sbjct: 800 LSIKLLRLG-SIGKFLSKAIEPPPIDAVIEAEVILREMKCLDENNELTPLGKILARLPIE 858
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + C+ AL+ A+ P + P+ ++ + K+ + Y SD
Sbjct: 859 PRLGKMMILGCIF-CVGDALSTMAANSTTFPEVYNMGPDVRRLSAQQKWFAGARY---SD 914
Query: 835 QLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A++ AF+ W+ A+ G+ E FC +S + + + QLQ L GF E +
Sbjct: 915 HVAMLHAFQAWEEARAGGEYAEQAFCDSKNLSMPTLRVTWEAKYQLQALLQSAGFPEETL 974
Query: 893 SSCSHNARVPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
N + I A+L GLYP V HK R+ + T A + +H S+N
Sbjct: 975 CPTPLNYQAGADVRLDTITALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVN 1029
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
++++ P V+ E R + + T+V P+ LLL +
Sbjct: 1030 CS-NYEQNFPFPFFVFGEKIRTR-AVSCKQMTMVSPIHLLLFGS 1071
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 181/299 (60%), Gaps = 34/299 (11%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R++++ NL++ ++ERS LP+ K+ I + ++ N +++I G TGCGKTTQV QF+L+
Sbjct: 365 RLQQNDNLQKSIKERSSLPVFLKKNEIMNAINENSIIIIRGNTGCGKTTQVCQFILDDYI 424
Query: 231 SKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+ G+ C I TQPRRISA SV++R++ ER EN+G ++GY +R ES + + SI+FCT
Sbjct: 425 ASGQGAFCNIAITQPRRISAVSVSDRVASERCENLGQSVGYSVRFESCLPRPYGSIMFCT 484
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+ Y
Sbjct: 485 VGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHMY 528
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI------LKSAESN 401
P LR+ILMSAT+D FS YF CPVI++PG +YPV+ ++LED + + + S +
Sbjct: 529 PDLRIILMSATIDTTLFSNYFNNCPVIEIPGRSYPVQQYFLEDCIQLTNFIPPMDSKKRK 588
Query: 402 HLDSASLIVPNE---------DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSP 451
+ DS L E DPE + + K+ + + S + + LL+ ++ + P
Sbjct: 589 NRDSDDLPTEGEPEENLNKIIDPEYSIQTKNAMAQLSEKEISFELIEALLKYINDQSIP 647
>gi|426249964|ref|XP_004023565.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DHX30 [Ovis aries]
Length = 1012
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 219/397 (55%), Gaps = 26/397 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGA------ILVFLPGWEDINKTRDRLLANPFFRDTSKFVII 596
+DL L+ L+ I E G L FLPGW++I + RL SK++I+
Sbjct: 575 LDLDLVTDLVLHIDARGEPGGRPFAAGPLCFLPGWQEIKGVQQRL-QEALGMHESKYLIL 633
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
P+HS +P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD
Sbjct: 634 PVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTK 693
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQ 716
VS L++ WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ
Sbjct: 694 VSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQ 753
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIG-ALSLDEKVTELGEKLGCLSVHP 775
K+ P +FL K +D P + A+I+LQ+ G L E +T LG++L +S P
Sbjct: 754 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQESGRVLDQREYLTTLGQRLAHISTDP 813
Query: 776 LMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
++K + A + CL P L ++C + RDPF S + + RA K + + SD
Sbjct: 814 RLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSD 867
Query: 835 QLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI--- 888
LA + A W+ + R + + + + + + G+ KQ +E I F+
Sbjct: 868 HLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGK 926
Query: 889 PEDVS----SCSHNARVPGIIHAVLMAGLYPMVARLR 921
P D + C+ + ++ VLMAGLYP + ++R
Sbjct: 927 PSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVR 963
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
L++ + P+ + VS H++VDE+HERD +DF+L +++ + P LRL+LMSAT D +
Sbjct: 466 LRKLQSNPSLEGVS---HVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNE 522
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 523 RFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 562
>gi|301615908|ref|XP_002937403.1| PREDICTED: ATP-dependent RNA helicase A-like protein [Xenopus
(Silurana) tropicalis]
Length = 1257
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 158/455 (34%), Positives = 239/455 (52%), Gaps = 22/455 (4%)
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPS 604
L LIE LL+ I + GA+LVFLPGW I + L NP F S + I+PLHS +P
Sbjct: 636 LELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHS-YCILPLHSQIPR 694
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +NN++ + W
Sbjct: 695 DEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVW 754
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
SK + +QR GRAGR + G C+HL S+ R L PEI R P+ E+ L +KLL
Sbjct: 755 ASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHLTPEIFRTPLHEVALSIKLLRLG- 813
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I FL K ++PP + A L+++ AL ++++T LG L L + P + KM+
Sbjct: 814 GIGQFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIMG 873
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+ D T++ A+ + +PF +E +R A SD +A+++ F+
Sbjct: 874 CIFYVGDALCTISAATCFPEPFI-----SEGRRLGYVHRNFAG--NRFSDHVALLSVFQA 926
Query: 845 WKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP 902
W +A+ G+EA FC ++ + M + QL+ L+ +GF E + + N P
Sbjct: 927 WDDARMGGEEAETRFCEHKRLNMATLRMTWEAKVQLKEILVNSGFPEECLMTQVFNNTGP 986
Query: 903 ----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD-D 957
++ ++L G+YP V HK R+ + T G + +H S+N S +
Sbjct: 987 DNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNCPFSNQDLKYP 1041
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
P V+ E R + + T+V PL LLL A++
Sbjct: 1042 SPFFVFSEKIRTR-AISAKGMTMVSPLQLLLFASK 1075
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 150/224 (66%), Gaps = 19/224 (8%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--S 231
+D N++Q++ +R LP+ F++ I V ++ VV+I G TGCGKTTQVPQ++L+
Sbjct: 376 QDPNMKQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDECIRND 435
Query: 232 KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGV 290
+ C IV TQPRRISA SVAER++ ERGE IG + GY +R ES + H+S++FCT GV
Sbjct: 436 RAAQCNIVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGV 495
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
LLR L + + ++H+IVDEIHERD +DF+L ++RD++ ++P +
Sbjct: 496 LLRKL----------------EAGIRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPDI 539
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
R+ILMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 540 RVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYFLEDCIQM 583
>gi|73960445|ref|XP_537154.2| PREDICTED: ATP-dependent RNA helicase A isoform 1 [Canis lupus
familiaris]
Length = 1276
Score = 239 bits (611), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 625 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPDF-GSHRYQ 683
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 684 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 743
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 744 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 803
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 804 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 862
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 863 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 915
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 916 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 974
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 975 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1029
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1030 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1074
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 157/239 (65%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 360 QISMDLKNELMYQLEQDHDLPAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 419
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 420 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESV 479
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ ++SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 480 LPRPYASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 523
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 524 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 582
>gi|15559770|gb|AAH14237.1| DHX30 protein [Homo sapiens]
Length = 501
Score = 239 bits (611), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 228/416 (54%), Gaps = 27/416 (6%)
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+
Sbjct: 4 SKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEER 63
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+
Sbjct: 64 YDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPL 123
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
E L LQ K+ P +FL K +D P + A+I+LQ+IG L E +T LG++L
Sbjct: 124 ENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAH 183
Query: 771 LSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
+S P ++K + A + CL P L ++C + RDPF S + + RA K + +
Sbjct: 184 ISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSH 237
Query: 830 GGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD LA + A W+ + R + + + + + + G+ KQ +E I
Sbjct: 238 DSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEA 296
Query: 887 FI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVET 933
F+ P D + C+ + ++ VLMAGLYP + ++R + G+
Sbjct: 297 FLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYR 356
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ LH ++N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 357 TKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 409
>gi|347836585|emb|CCD51157.1| similar to ATP dependent RNA helicase [Botryotinia fuckeliana]
Length = 1474
Score = 239 bits (611), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 240/487 (49%), Gaps = 46/487 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
+A + I+ L+ QL+ KI D AILVFLPG +I D L +P F +
Sbjct: 933 IAQFDEYRIEFDLVTQLIAKIAADDRFVPYSKAILVFLPGIAEIRTLNDMLCGHPAF--S 990
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
S + I PLHS + S Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 991 SDWYIYPLHSTIASEDQEAAFLVPPPGIRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1050
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIP 709
+D +S L +++SKA+AKQR GRAGR Q G+C+HL+++ R L D Q PE R+
Sbjct: 1051 FDERRQLSRLLETFISKANAKQRRGRAGRVQEGLCFHLFTKYRHDEILADQQTPEFLRLS 1110
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L + LDPP + IR AI L D+ AL+ E +T LG +L
Sbjct: 1111 LQDLAIRVKICKLG-GIEETLSEALDPPSAKNIRRAIDALVDVRALTAGEDLTPLGLQLA 1169
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD A+T+A + PF+ P +R A LA
Sbjct: 1170 RLPLDVFLGKLMLLGSVFKCLDAAVTIAAILSSKSPFSAPFG----QRQQADTVRLA-FR 1224
Query: 830 GGQSDQLAVIAAFECWKNA-KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
G SD L V A+ WK G E FC + F+S ++ + ++ QL L+ +GF+
Sbjct: 1225 KGDSDLLTVYNAYLAWKKVCMANGSEYQFCRKNFLSQQSLSNIEDLKGQLVVCLVDSGFL 1284
Query: 889 P--EDVSSCSHNARVPG--------------------IIHAVLMAGLYPMVARLRPPHKN 926
P E + + R I+ +V+ YP + ++
Sbjct: 1285 PLTEAERTALNRTRYTSRRRQFFEIPFRINANSDNDIIVSSVIGWSFYPKLL-----IRD 1339
Query: 927 GRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPL 986
G+ F A + LHP S+N K + + Y I + + T V +
Sbjct: 1340 GKGFRNCANNQSISLHPTSVN-----KGHHELKWLSYYHIMQAKQFYNAHETTAVEEFSI 1394
Query: 987 LLLATEI 993
LL ++
Sbjct: 1395 ALLCGDV 1401
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 153/231 (66%), Gaps = 20/231 (8%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ +++ R +LP+ SFKD + +D +QVV++ GETGCGK+TQVP F+LEH S+G+ CKI
Sbjct: 676 QHMLQSRMQLPMWSFKDEVLGAIDHSQVVIVCGETGCGKSTQVPAFILEHQLSRGKPCKI 735
Query: 239 VCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A R+S E GE D +GY IRLES K + +++ T G+++
Sbjct: 736 YCTEPRRISAISLARRVSEELGERKSDLGTSRSLVGYAIRLESNTSKETRLIYATTGIVM 795
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L E SN D+ +THI++DE+HER SDF+L ++R +L P L++
Sbjct: 796 RML---------EGSN-----DLRDITHIVLDEVHERTIDSDFLLIVLRKLLVRRPDLKV 841
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHL 403
+LMSAT+DADRFS+Y G PV+ VPG T+PV+ YLED + + + N L
Sbjct: 842 VLMSATVDADRFSKYLDGAPVLNVPGRTFPVQVKYLEDAVELTGFSLDNGL 892
>gi|66510919|ref|XP_396525.2| PREDICTED: dosage compensation regulator isoform 2 [Apis mellifera]
Length = 1239
Score = 239 bits (611), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 244/464 (52%), Gaps = 20/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A ++ + I LIE LL+ I S GAIL+FLPGW I L +P + + +V
Sbjct: 621 MAQLSEKEISFELIEALLKYINDQSIPGAILIFLPGWNLIFALMKHLQQHPIYGGIN-YV 679
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS +P Q+KVF P G KIIL+TNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 680 IIPLHSQLPREDQRKVFDPVPSGITKIILATNIAETSITINDVVYVIDSCKAKMKLFTSH 739
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFNKMDEHMTPEMFRTPLHELA 799
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL K ++PP + A ++L+++ L + ++T LG+ L L +
Sbjct: 800 LSIKLLRLG-SIGKFLSKAIEPPPIDAVIEAEVILREMKCLDENNELTPLGKILARLPIE 858
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + C+ AL+ A+ P + P+ ++ + K+ + Y SD
Sbjct: 859 PRLGKMMILGCIF-CVGDALSTMAANSTTFPEVYNMGPDVRRLSAQQKWFAGARY---SD 914
Query: 835 QLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A++ AF+ W+ A+ G+ E FC +S + + + QLQ L GF E +
Sbjct: 915 HVAMLHAFQAWEEARAGGEYAEQAFCDSKNLSMPTLRVTWEAKYQLQALLQSAGFPEETL 974
Query: 893 SSCSHNARVPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
N + I A+L GLYP V HK R+ + T A + +H S+N
Sbjct: 975 CPTPLNYQAGADVRLDTITALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVN 1029
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
++++ P V+ E R + + T+V P+ LLL +
Sbjct: 1030 CS-NYEQNFPFPFFVFGEKIRTR-AVSCKQMTMVSPIHLLLFGS 1071
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 181/299 (60%), Gaps = 34/299 (11%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R++++ NL++ ++ERS LP+ K+ I + ++ N +++I G TGCGKTTQV QF+L+
Sbjct: 365 RLQQNDNLQKSIKERSSLPVFLKKNEIMNAINENSIIIIRGNTGCGKTTQVCQFILDDYI 424
Query: 231 SKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+ G+ C I TQPRRISA SV++R++ ER EN+G ++GY +R ES + + SI+FCT
Sbjct: 425 ASGQGAFCNIAITQPRRISAVSVSDRVASERCENLGQSVGYSVRFESCLPRPYGSIMFCT 484
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+ Y
Sbjct: 485 VGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHMY 528
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI------LKSAESN 401
P LR+ILMSAT+D FS YF CPVI++PG +YPV+ ++LED + + + S +
Sbjct: 529 PDLRIILMSATIDTTLFSNYFNNCPVIEIPGRSYPVQQYFLEDCIQLTNFIPPMDSKKRK 588
Query: 402 HLDSASLIVPNE---------DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSP 451
+ DS L E DPE + + K+ + + S + + LL+ ++ + P
Sbjct: 589 NRDSDDLPTEGEPEENLNKIIDPEYSIQTKNAMAQLSEKEISFELIEALLKYINDQSIP 647
>gi|392597627|gb|EIW86949.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1339
Score = 239 bits (611), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 216/392 (55%), Gaps = 24/392 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINK---TRDRLLANPFFRDTSKFVIIPLH 599
ID LI L++ I ++ G IL+FLPG ++I + T R++ D++ V+ PLH
Sbjct: 802 IDYELIAALVQHIRGTAKKGGILIFLPGVQEIRQCLETIRRVI------DSADAVLFPLH 855
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
+ + S +Q+KVF+ P KII +TN+AET+ITIDD+VYVIDSGR KE SYDP N ++
Sbjct: 856 ANLTSDEQQKVFQ--PTKKWKIIAATNVAETSITIDDIVYVIDSGRAKEISYDPDNGLTK 913
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L WVS+A+ KQR GRAGR Q G CY LY+Q +L F VPEI R P+E + L VK+
Sbjct: 914 LVEKWVSRAAIKQRRGRAGRTQPGTCYKLYTQRHEQNLAGFSVPEILRTPLENISLTVKV 973
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
+ + +++ +L + +DPP I A +L+++GA+ L ++T LG + L V + K
Sbjct: 974 MREHEDVKSYLSRAIDPPEVTAIEKAWSILEELGAVDLSGQLTPLGRHISQLPVDLRLGK 1033
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
ML L CLDP L++A + F P+ E+ KF+ SD L +
Sbjct: 1034 MLVLGTLFRCLDPILSVAACLSSKPVFLNPMDKREEASQARLKFD-----KDNSDLLTDV 1088
Query: 840 AAF-ECWK---NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC 895
A+ EC + K R +C + F+S + + MR+ + L + G +
Sbjct: 1089 NAYNECVRYQSEGKGRSSFTSYCGENFISHVAVREVASMRQDYFSALSELGLVSRSAGPT 1148
Query: 896 SH----NARVPGIIHAVLMAGLYPMVARLRPP 923
S N+ +I A+++ GL+P VAR+ P
Sbjct: 1149 SEALNTNSANTNLIKAIILGGLWPNVARVHLP 1180
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 148/246 (60%), Gaps = 23/246 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL--EHIWSKGETCKIVCTQ 242
R +LP + K ST++ N+VV++ GETGCGKTTQ+PQF+L E + +G+ I+ TQ
Sbjct: 562 RERLPAFAAKAKFLSTLEKNRVVVVVGETGCGKTTQLPQFILDSEILSKRGKAASIIVTQ 621
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRISA S+A R+ ER ++ ++GY IR ES+ + + FCT GV+LR L S
Sbjct: 622 PRRISAISIAARVGAERADD--GSVGYAIRGESRRTSKTKLTFCTTGVVLRRLGS----- 674
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
D + +TH++VDE+HER SDF+L ++++L ++ L++ILMSAT++ +
Sbjct: 675 ---------GDKLQDVTHVVVDEVHERSVDSDFLLLELKELLKTHTSLKVILMSATINHE 725
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVL-SILKSAESNHLDSASLIVPNEDPELTEEN 421
F +Y+ P++ +PGFT+PV Y+ED + S+ A + + + +DP E
Sbjct: 726 TFVRYYDNAPMLTIPGFTHPVTDLYMEDFIGSVFYKAH----NVKTRKLAEDDPYFVELK 781
Query: 422 KSTLDE 427
LD+
Sbjct: 782 AKGLDD 787
>gi|119569364|gb|EAW48979.1| YTH domain containing 2, isoform CRA_b [Homo sapiens]
Length = 405
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 208/373 (55%), Gaps = 33/373 (8%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFC----KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITS 199
R ++F +MSK + ++ + +I + R LP+ ++ I
Sbjct: 150 ---RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVK 204
Query: 200 TVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVER 259
+ N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER
Sbjct: 205 IIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAER 264
Query: 260 GENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALT 319
E IG IGY+IRLES+ + + FCTNGVLLR L++ +S +T
Sbjct: 265 RERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVT 311
Query: 320 HIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGF 379
H+IVDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G
Sbjct: 312 HVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGR 371
Query: 380 TYPVKSFYLEDVL 392
+ VK +LED+L
Sbjct: 372 PFEVKEMFLEDIL 384
>gi|389742226|gb|EIM83413.1| P-loop containing nucleoside triphosphate hydrolase protein [Stereum
hirsutum FP-91666 SS1]
Length = 1321
Score = 239 bits (610), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 247/476 (51%), Gaps = 37/476 (7%)
Query: 496 RTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKI 555
R+ +Q EQE + M A SDS ++ L +P LI L I ++RK
Sbjct: 637 RSVMQYLEQE----LPSTSGPRMGGAQSDSENDNRPERELEMPHP-LIALT-IAHVMRK- 689
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPF---FRDTSKFVIIPLHSMVPSVQQKKVFK 612
++DG +LVFLPGWEDI+ L P F D SK+ I LHS VP +Q+ +F+
Sbjct: 690 ---TDDGHVLVFLPGWEDISALNRMLQERPLGLPFNDKSKYSIHLLHSTVPVAEQQVIFE 746
Query: 613 RPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQ 672
PP G R+IIL+TNIAET++TI DVVYV+DS ++KE+ YDP ++S+L S+WV ++ Q
Sbjct: 747 PPPAGVRRIILATNIAETSVTIPDVVYVVDSAKVKEQRYDPQRHMSSLVSAWVGSSNLNQ 806
Query: 673 RAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD-PNCNIEDFLQ 731
RAGRAGR + G Y + S+ RA L Q+ E+KR+ + + + VK LD P +E+ L
Sbjct: 807 RAGRAGRHRPGEYYGILSRKRANELAPHQLVEMKRVDLTNVVMHVKALDFPGMAVEEVLA 866
Query: 732 KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLD 791
T++PP + + A+ L+ +GA+ + +T LG L + V + +++ + CLD
Sbjct: 867 ATIEPPSAEQVDAAMNDLKIVGAIDSLQNLTPLGRVLLQIPVEVQVGRLVLYGSFFRCLD 926
Query: 792 PALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR 851
ALTLA RDPF P+ ++ A A + +SD A + A+ W + R
Sbjct: 927 QALTLAAILTNRDPFVSPMHLKQEASAVKASWTPQEF---RSDTFAALQAYNQWWAMQSR 983
Query: 852 G---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNAR-------- 900
G FCS F+S + M+ ++K L LI+ G + DVS+ R
Sbjct: 984 GDYHSANRFCSDNFLSKPTLLMVDKIKKHLLDALIRAGVV--DVSAGGQVDRWNMGRGNQ 1041
Query: 901 --VPGIIHA-----VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
VP ++ L+A L + + + + G R T V +HP S+N +
Sbjct: 1042 IQVPPELNVNGESQPLLAALIAVATQPKYAIQTGERSFRTQQDKMVFIHPSSVNAR 1097
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 145/236 (61%), Gaps = 22/236 (9%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE 234
+ + ++ RS LP+ + + V ++V ++ TG GKTTQ+PQ +L+H +GE
Sbjct: 399 NPQMEKMRSTRSTLPVYTRSQDVLDHVRDHEVTILMAATGSGKTTQIPQLILDHAIERGE 458
Query: 235 --TCKIVCTQPRRISATSVAERISVERGENIG-DNIGYKIRLESK-GGKHSSIVFCTNGV 290
C IVCTQPRRI+A SVA+R++ ERGE +G ++GY +R E K +H SI FCT G+
Sbjct: 459 GAKCNIVCTQPRRIAAISVADRVAKERGEQVGRGSVGYTVRFEHKPPEEHGSITFCTTGI 518
Query: 291 LLRLLVSQGVSRLKEASNK--PAKDDVSALTHIIVDEIHERDRYSDFMLAIIR----DML 344
L+ + + L+E S++ P+ DDV TH+IVDE+HERD +D +L +++ D
Sbjct: 519 FLKRMQTA----LQEGSSQGGPSMDDV---THVIVDEVHERDVDTDLLLVVLKRLLADRK 571
Query: 345 PSYPHLRLILMSATLDADRFSQYF---GGCP--VIQVPGFTYPVKSFYLEDVLSIL 395
+++ILMSAT+D F QYF G P VI+VPG ++PV+ +L+D L L
Sbjct: 572 ARGKPIKVILMSATIDPTLFQQYFPDEKGIPAAVIEVPGRSFPVEKHFLDDFLREL 627
>gi|351704636|gb|EHB07555.1| ATP-dependent RNA helicase A [Heterocephalus glaber]
Length = 1513
Score = 239 bits (610), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 243/465 (52%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 710 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHF-GSHRYQ 768
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 769 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 828
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 829 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 888
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL +++++T LG L L +
Sbjct: 889 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDINDELTPLGRILAKLPIE 947
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF +E KR A SD
Sbjct: 948 PRFGKMMIMGCIFYVGDAVCTIAAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 1000
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ L+ +GF E +
Sbjct: 1001 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILLNSGFPEECL 1060
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 1061 LTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNC 1115
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1116 PFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1159
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/241 (43%), Positives = 159/241 (65%), Gaps = 20/241 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E D +L+ +++ER LP+ F++ I + N VV+I G TGCGKT
Sbjct: 445 QISMDLKNELMYQLEHDQDLQAVLQERESLPVKKFENEILEAISQNSVVIIRGATGCGKT 504
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 505 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 564
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 565 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 608
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 609 LLVVLRDVVLAYPEVRVVLMSATIDTSMFCEYFFSCPIIEVYGRTFPVQEYFLEDCIQMT 668
Query: 396 K 396
+
Sbjct: 669 Q 669
>gi|335306989|ref|XP_003130411.2| PREDICTED: ATP-dependent RNA helicase A-like [Sus scrofa]
Length = 1286
Score = 239 bits (610), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 620 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGN-HRYQ 678
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 679 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 738
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 739 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 798
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 799 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 857
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 858 PRFGKMMIMGCIFYVGDAICTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 910
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 911 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 969
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 970 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1024
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1025 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1069
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 156/247 (63%), Gaps = 22/247 (8%)
Query: 151 FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS 210
F P+ EI L ++E+D +L+ I++ER LP+ F+ I + N VV++
Sbjct: 350 FATPEQISVEIK---NELMYQLEQDRDLQAILQERELLPVKKFESEILEAISQNPVVIVR 406
Query: 211 GETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIG 268
G TGCGKTTQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + G
Sbjct: 407 GATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCG 466
Query: 269 YKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
Y +R ES + H+SI+FCT GVLLR L + + ++H+IVDEIH
Sbjct: 467 YSVRFESILPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIH 510
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ERD +DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++
Sbjct: 511 ERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF 570
Query: 388 LEDVLSI 394
LED + +
Sbjct: 571 LEDCIQM 577
>gi|348543015|ref|XP_003458979.1| PREDICTED: ATP-dependent RNA helicase A-like protein-like
[Oreochromis niloticus]
Length = 1288
Score = 239 bits (610), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 159/479 (33%), Positives = 249/479 (51%), Gaps = 24/479 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + L+E LL+ I GA+LVFLPGW I + L +NP F ++++
Sbjct: 642 MAQINEKETSFELVEALLKYIETLQVAGAVLVFLPGWNLIYSMQRHLESNPHF-GSNRYR 700
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q++VF+ P RK+ILSTNIAET+ITI+DVVYV+DS + K K + +
Sbjct: 701 ILPLHSQIPREEQRRVFEPVPDDIRKVILSTNIAETSITINDVVYVVDSCKQKVKLFTSH 760
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PEI R P+ E+
Sbjct: 761 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDKLETHMTPEIFRTPLHEIA 820
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 821 LSIKLLRLG-GIGHFLSKAIEPPPLDAVIEAEHTLKELDALDSNDELTPLGRILARLPIE 879
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-S 833
P + KM+ + D T++ A+ + +PF +E KR F + G + S
Sbjct: 880 PRLGKMMIMGCIFHVGDAMCTISAATCFPEPFI-----SEGKR---LGFVHRNFAGSRFS 931
Query: 834 DQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A+++ F+ W + + G+EA FC ++ + M + QL+ L+ +GF E
Sbjct: 932 DHVALLSVFQAWDDVRINGEEAESRFCDHKRLNMSTLRMTWEAKVQLKEILVNSGFPEEC 991
Query: 892 VSSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+ + N P ++ ++L G YP V HK R+ + T G + +H S+N
Sbjct: 992 LMTQMFNTVGPDNNLDVVVSLLTFGSYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1046
Query: 948 FKL-SFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD 1005
S P V+ E R + + T+V PL LLL A + + E DD
Sbjct: 1047 CPFSSHDMIYPSPFFVFGEKIRTR-AISAKGMTLVSPLQLLLFACKKVTSNGEIVELDD 1104
Score = 222 bits (566), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 163/249 (65%), Gaps = 22/249 (8%)
Query: 151 FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS 210
+C P+ ++ + L ++E D NL++I+ ER +LP+ F++ I + +D + VV+I
Sbjct: 373 YCTPEQISGDLH---DELKYQLEHDENLQKILMEREQLPVKQFEEEIMAAIDKSPVVIIR 429
Query: 211 GETGCGKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIG 268
G TGCGKTTQVPQ++L+ G C IV TQPRRISA SVAER++ ER E++G + G
Sbjct: 430 GATGCGKTTQVPQYILDRFIKGGRASDCNIVVTQPRRISAVSVAERVAFERAEDLGKSCG 489
Query: 269 YKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
Y +R ES + H+S++FCT GVLLR L + + ++H+IVDEIH
Sbjct: 490 YSVRFESVLPRPHASVLFCTVGVLLRKL----------------EAGIRGISHVIVDEIH 533
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ERD +DF++ ++RD++ +YP +R+ILMSAT+D F +YF CPVI+V G T+PV+ ++
Sbjct: 534 ERDINTDFLMVVLRDVVQAYPDVRIILMSATIDTTMFREYFFSCPVIEVFGRTFPVQEYF 593
Query: 388 LEDVLSILK 396
LED + + K
Sbjct: 594 LEDCIQMTK 602
>gi|328785633|ref|XP_003250627.1| PREDICTED: dosage compensation regulator isoform 1 [Apis mellifera]
Length = 1232
Score = 239 bits (610), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 244/464 (52%), Gaps = 20/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A ++ + I LIE LL+ I S GAIL+FLPGW I L +P + + +V
Sbjct: 614 MAQLSEKEISFELIEALLKYINDQSIPGAILIFLPGWNLIFALMKHLQQHPIYGGIN-YV 672
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS +P Q+KVF P G KIIL+TNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 673 IIPLHSQLPREDQRKVFDPVPSGITKIILATNIAETSITINDVVYVIDSCKAKMKLFTSH 732
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL
Sbjct: 733 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFNKMDEHMTPEMFRTPLHELA 792
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL K ++PP + A ++L+++ L + ++T LG+ L L +
Sbjct: 793 LSIKLLRLG-SIGKFLSKAIEPPPIDAVIEAEVILREMKCLDENNELTPLGKILARLPIE 851
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + C+ AL+ A+ P + P+ ++ + K+ + Y SD
Sbjct: 852 PRLGKMMILGCIF-CVGDALSTMAANSTTFPEVYNMGPDVRRLSAQQKWFAGARY---SD 907
Query: 835 QLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A++ AF+ W+ A+ G+ E FC +S + + + QLQ L GF E +
Sbjct: 908 HVAMLHAFQAWEEARAGGEYAEQAFCDSKNLSMPTLRVTWEAKYQLQALLQSAGFPEETL 967
Query: 893 SSCSHNARVPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
N + I A+L GLYP V HK R+ + T A + +H S+N
Sbjct: 968 CPTPLNYQAGADVRLDTITALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVN 1022
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
++++ P V+ E R + + T+V P+ LLL +
Sbjct: 1023 CS-NYEQNFPFPFFVFGEKIRTR-AVSCKQMTMVSPIHLLLFGS 1064
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 181/299 (60%), Gaps = 34/299 (11%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R++++ NL++ ++ERS LP+ K+ I + ++ N +++I G TGCGKTTQV QF+L+
Sbjct: 358 RLQQNDNLQKSIKERSSLPVFLKKNEIMNAINENSIIIIRGNTGCGKTTQVCQFILDDYI 417
Query: 231 SKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+ G+ C I TQPRRISA SV++R++ ER EN+G ++GY +R ES + + SI+FCT
Sbjct: 418 ASGQGAFCNIAITQPRRISAVSVSDRVASERCENLGQSVGYSVRFESCLPRPYGSIMFCT 477
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+ Y
Sbjct: 478 VGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHMY 521
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI------LKSAESN 401
P LR+ILMSAT+D FS YF CPVI++PG +YPV+ ++LED + + + S +
Sbjct: 522 PDLRIILMSATIDTTLFSNYFNNCPVIEIPGRSYPVQQYFLEDCIQLTNFIPPMDSKKRK 581
Query: 402 HLDSASLIVPNE---------DPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSP 451
+ DS L E DPE + + K+ + + S + + LL+ ++ + P
Sbjct: 582 NRDSDDLPTEGEPEENLNKIIDPEYSIQTKNAMAQLSEKEISFELIEALLKYINDQSIP 640
>gi|401888985|gb|EJT52928.1| DEAH RNA helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1572
Score = 239 bits (610), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 208/376 (55%), Gaps = 17/376 (4%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN----PF----FR 588
T N I L+ + + S+DG +LVFLPGW++I K D LL N P F
Sbjct: 862 TSNELEIPYPLMALTIAHVLRQSDDGHVLVFLPGWDEIKKVADILLDNSGKYPLLGLNFN 921
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
D S+F + LHS +P+ +Q++VFK PPPG R+IIL+TNIAET++TI DVVYV+DS R+KE
Sbjct: 922 DASQFSVHYLHSTIPAAEQREVFKPPPPGVRRIILATNIAETSVTIPDVVYVVDSARVKE 981
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRI 708
K YDP ++S+L S+WV ++ QRAGRAGR + G + L S+ R SL Q+ E+KR
Sbjct: 982 KRYDPDRHMSSLVSAWVGSSNLGQRAGRAGRHREGEYFGLLSRRRLESLDPHQLVEMKRS 1041
Query: 709 PIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
+ + + VK L+ +ED L +T++PP + A+ L+ +GAL D+ +T LG L
Sbjct: 1042 DLSNVVMHVKALNLG-EVEDVLAQTIEPPEPPRVMAAMDTLRMLGALDGDQNLTSLGRVL 1100
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K+ F CLD ALTLA RDPF P+ ++ A + +
Sbjct: 1101 LQLPVDAAIGKLCLFGSFFRCLDSALTLAAVLTNRDPFIAPLLVKQEADAVKDSWSPVAF 1160
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
+SD AV+AAF W RG+ F S F+S + + ++ L L +
Sbjct: 1161 ---RSDPFAVVAAFNQWSLMDDRGEYGAANRFASDNFLSKPTLLQIKQVKGSLLQSLEQA 1217
Query: 886 GFIPEDVSSCSHNARV 901
G I VS+ H R+
Sbjct: 1218 GII--SVSAGGHVPRI 1231
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 154/259 (59%), Gaps = 18/259 (6%)
Query: 157 SKAEIAMKVESLTSRI---EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
S +E+ K +L R+ E D L ++ + R+ LP+ + I + ++ N V ++ T
Sbjct: 575 SASELQAKSMALQDRLADYETDPKLEKMRDTRAALPVHTKATDILARIEVNDVTIVMAAT 634
Query: 214 GCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
G GKTTQVPQ +L+ ++G+ C IVCTQPRR++A SVAER++ ERG+ +G +GY++
Sbjct: 635 GSGKTTQVPQLILDDWINRGDGAKCNIVCTQPRRLAAMSVAERVADERGQPLGREVGYQV 694
Query: 272 RLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
R + K + + SI FCT G+ L+ + S L +N + + +TH++VDE+HERD
Sbjct: 695 RFDVKVPQPNGSITFCTTGIFLKRMQSA----LGSNANPESVAAMDQVTHVVVDEVHERD 750
Query: 331 RYSDFMLAIIR----DMLPSYPHLRLILMSATLDADRFSQYF----GGCPVIQVPGFTYP 382
+D +L +++ D ++++LMSAT+D F +YF G PV +VPG T+P
Sbjct: 751 VDTDLLLVVLKRLLADRKARRKPIKIVLMSATIDPTLFQRYFADERGLAPVAEVPGRTFP 810
Query: 383 VKSFYLEDVLSILKSAESN 401
V+ YL++ L L++ N
Sbjct: 811 VERHYLDEFLGQLQNIPRN 829
>gi|432089382|gb|ELK23333.1| ATP-dependent RNA helicase A [Myotis davidii]
Length = 1163
Score = 239 bits (610), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 515 MAQLNEKETSFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNAHF-GSHRYQ 573
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 574 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 633
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 634 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 693
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL +++++T LG L L +
Sbjct: 694 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDINDELTPLGRILAKLPIE 752
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 753 PRFGKMMIMGCIFYVGDAICTISAATCFPEPFI-----SEGKRLGYVHRNFAGTRF--SD 805
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 806 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 864
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 865 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 919
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 920 CPFSSQDVKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 964
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M ++S L ++++D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 250 QISMDLKSELMYQLDQDHDLQAILQERELLPVKKFEGEILEAISQNSVVIIRGATGCGKT 309
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 310 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESV 369
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 370 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 413
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 414 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQM 472
>gi|424513353|emb|CCO65975.1| predicted protein [Bathycoccus prasinos]
Length = 1419
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 204/363 (56%), Gaps = 11/363 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDS-EDGAILVFLPGWEDINKTRDRLLANP-FFRDTSK 592
L ++ E I+ L+ +LL KI + ++GAILVF+PG +I K + A+ F+ T
Sbjct: 808 LRNLDEEKINYELVVELLEKIVQTTPQEGAILVFMPGLAEIQKLHESCAASRVLFKATDN 867
Query: 593 FV-IIPLHSMVPSVQQKKVFKRPPP-GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+I LHS + + + F +P RKII+STNIAET+ITIDDVVYV+DSG++KE
Sbjct: 868 GTYLIALHSALATSESTIAFDKPKSKSSRKIIISTNIAETSITIDDVVYVLDSGKVKENG 927
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS-QLRAASLPDFQVPEIKRIP 709
YDP + L+ W+S+ASAKQR GRAGR Q G CY LYS + + Q EIKR+P
Sbjct: 928 YDPSTRMLQLKEQWISRASAKQRRGRAGRVQPGQCYRLYSRRYHDEVFAERQEAEIKRVP 987
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+E LCLQ++L + I FL + L+PP S + A+ L+ +GAL + +T LG L
Sbjct: 988 LEGLCLQIQLQRMSGGISGFLSRALEPPESNAVDVAVKTLKRLGALDDRDNLTPLGAHLA 1047
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V + KML + ++ CLDP LT+A R PF P+ E+ A AK + +
Sbjct: 1048 NLPVDVRVGKMLLYGCVLGCLDPTLTIAAVLGSRSPFLSPLEMREE--ADEAKMQFSD-- 1103
Query: 830 GGQSDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
SD L ++ A+ W+ AK G+ E FC F+S + + R Q L + GF
Sbjct: 1104 NDFSDHLTILNAYNAWREAKNNGKNFEKDFCRDNFLSMKGLYGIAEQRTQFVKLLREAGF 1163
Query: 888 IPE 890
+ E
Sbjct: 1164 LNE 1166
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/256 (44%), Positives = 162/256 (63%), Gaps = 23/256 (8%)
Query: 145 GKRVDI-----FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITS 199
G+R+ I PK + A+K + ++K+++ V ER LP S + +
Sbjct: 517 GERIQIEEAKALTLPKNVETSKALKSQLENKLMQKESDPMMKVRER--LPSWSKRHALIE 574
Query: 200 TVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISV 257
++ NQV ++ GETGCGKTTQ+PQF+L++ +K G T I+CTQPRRISATSVA R++
Sbjct: 575 AIERNQVCVVVGETGCGKTTQLPQFILDNEIAKERGATTSIICTQPRRISATSVARRVAQ 634
Query: 258 ERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA 317
ER E IG +GY IRLESK + + I+FCT GVLLR L + ++
Sbjct: 635 ERNETIGKTVGYSIRLESKQSRETRIMFCTTGVLLRRLTEDPL--------------LAK 680
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVP 377
THI+VDE+HER SDF+L ++RD+LP P L++ILMSATLDA +F +YF V+ +P
Sbjct: 681 ATHIVVDEVHERSLDSDFLLVLLRDVLPHRPTLKVILMSATLDAGQFQRYFKKACVLTIP 740
Query: 378 GFTYPVKSFYLEDVLS 393
GFT+PV+ +LED+L+
Sbjct: 741 GFTHPVQEHFLEDILN 756
>gi|348578187|ref|XP_003474865.1| PREDICTED: ATP-dependent RNA helicase A-like [Cavia porcellus]
Length = 1291
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 243/465 (52%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 632 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHF-GSHRYQ 690
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 691 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 750
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 751 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 810
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL +++++T LG L L +
Sbjct: 811 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDINDELTPLGRILAKLPIE 869
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF +E KR A SD
Sbjct: 870 PRFGKMMIMGCIFYVGDAVCTIAAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 922
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ L+ +GF E +
Sbjct: 923 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILLNSGFPEECL 982
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 983 LTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNC 1037
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1038 PFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1081
Score = 204 bits (518), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E D +L+ +++ER LP+ F+ I ++ N VV+I G TGCGKT
Sbjct: 367 QISMDLKNELMCQLEHDQDLQAVLQERESLPVKKFESEILEAINQNSVVIIRGATGCGKT 426
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 427 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 486
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 487 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 530
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 531 LLVVLRDVVLAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQM 589
>gi|428171052|gb|EKX39972.1| hypothetical protein GUITHDRAFT_40761, partial [Guillardia theta
CCMP2712]
Length = 645
Score = 239 bits (609), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 218/386 (56%), Gaps = 20/386 (5%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
ID ++ +L+ I D G+IL FLPGWE+I + LL++PF +FV++ LHS
Sbjct: 272 FIDYDMLTELILHIDQDPRRGSILCFLPGWEEILSAHEMLLSHPFVVRNPRFVVLRLHSN 331
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+ +Q++VF+ RKI+LSTNIAET+IT+DD V+VIDSGR K +YDP+ +S+L
Sbjct: 332 ISPQEQQEVFRPVADDKRKIVLSTNIAETSITLDDCVFVIDSGRAKRMTYDPHTQISSLG 391
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+W SKA+ KQR GRAGR G+CY L+++ + A + D P++ +P++++CL L
Sbjct: 392 VTWASKANVKQRKGRAGRVCEGVCYRLFTRSQFAGMQDEMDPDMTVVPLDQICLSTLALQ 451
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
N ++ L + LDPP I A+ L+ +GA +K+ LG+KL + + P ++KML
Sbjct: 452 IG-NCQEVLSQALDPPPLSQIEVALKSLRGLGATDEQQKLLPLGQKLCQMHMEPRLAKML 510
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
F+ + CL P L + C +++DPF R A+ +A SDQL
Sbjct: 511 LFSTVFRCLRPMLAVVCGREFKDPFI------SDPRTEEARLRVAGRCC--SDQLLTAEI 562
Query: 842 FECWKNAKQRGQ-EAW-FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE------DVS 893
+++A R EA+ FC++ +S ++N + G + ++ + K G+ P D S
Sbjct: 563 LNLFESASDRSSAEAYDFCNRNLLSYNLLNQMKGFQTKVLDMVCKRGYRPPLQPFLMDSS 622
Query: 894 SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + ++ AV+ +GL P VAR
Sbjct: 623 TWDRHGE---LVRAVICSGLLPNVAR 645
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 141/214 (65%), Gaps = 12/214 (5%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQ 242
R +LP K+ ST+ N+V +ISG+TGCGKTTQVPQ + +H S G TC V TQ
Sbjct: 1 RQQLPGFKMKETCVSTILQNRVTIISGDTGCGKTTQVPQAVFDHYVSMGMGGTCHCVVTQ 60
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLLRLLVSQGVS 301
PRR+SA SVAER++ ER E +G +GY+IR ES + S++FCT GVL+R
Sbjct: 61 PRRVSAMSVAERVAAERVEILGTTVGYQIRQESVLPRSCGSLLFCTTGVLIR-------- 112
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
RL + A++ + ++ I VDE+HERD SDF+L +++ +L +R++LMSAT++A
Sbjct: 113 RLTKFIRTGAQE-IPNISIIFVDEVHERDVNSDFLLIMLKKILQHNSSIRIVLMSATINA 171
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
++FSQ+F CP++ +PG T+ V +LED ++I+
Sbjct: 172 EKFSQFFDSCPIVTIPGRTFDVTEQFLEDYVTII 205
>gi|336472780|gb|EGO60940.1| hypothetical protein NEUTE1DRAFT_76571 [Neurospora tetrasperma FGSC
2508]
gi|350293976|gb|EGZ75061.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 1390
Score = 239 bits (609), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 232/416 (55%), Gaps = 37/416 (8%)
Query: 551 LLRKIC-MDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVP 603
L+ +C +DSE G IL+FLPG +IN+ + L A P ++PLH+ +
Sbjct: 867 LVETVCAIDSELAETQKAGGILIFLPGVAEINRACNALRAVPSLH------VLPLHASLE 920
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+ +QK+VF PPG RK++++TN+AET+ITIDD+V VIDSGR+KE S+DP NN+ L+ +
Sbjct: 921 TKEQKRVFASAPPGKRKVVIATNVAETSITIDDIVAVIDSGRVKETSFDPQNNMRKLEET 980
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYS---QLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
W S+A+ KQR GRAGR QAG CY L++ +++ A PD PEI+R+P+E+LCL V+ +
Sbjct: 981 WASRAACKQRRGRAGRVQAGKCYKLFTRNLEMQMAERPD---PEIRRVPLEQLCLAVRAM 1037
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
++ FL + PP + + +I +L+ +GAL E++T LG++L + K+
Sbjct: 1038 GIK-DVSHFLSRAPTPPEATAVEASITMLRRMGALD-GEELTALGQQLAMIPADLRCGKL 1095
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ + + CLD +T+A + PF +SP EK+ AK G D L +
Sbjct: 1096 MVYGSIFGCLDDCVTIAAILSTKSPF---VSPQEKRE--EAKEARKRFSQGDGDLLTDLR 1150
Query: 841 AFECWKNA--KQRGQ---EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS-S 894
AF+ W + ++ GQ AW C F++ ++ + R Q + L + G IP + S S
Sbjct: 1151 AFQEWNDQMHERMGQSRVRAW-CGDNFLNYQTLSDIASTRSQYYSALKEMGIIPHNYSES 1209
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKL 950
S + ++ A+ + P +AR++ P K +F + GA V L P + K
Sbjct: 1210 NSQQTKSMALLRALTASAFSPQIARIQFPDK---KFAASMTGA-VELDPEAKTIKF 1261
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 169/285 (59%), Gaps = 31/285 (10%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--E 234
+ ++++ R LP +D + TV NQV +ISGETG GK+TQ QF+L+ ++SKG +
Sbjct: 602 SYKKMLYARQNLPAWQVQDYLIQTVSENQVTIISGETGSGKSTQSVQFILDDLYSKGLGK 661
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
+ I+ TQPRRISA +A+R+S ER +G +GY IR ESK ++ I F T GVLLR
Sbjct: 662 SANIIVTQPRRISALGLADRVSDERCSQVGQEVGYSIRGESKTSPNTRITFVTTGVLLRR 721
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L + G R+++ A DVS H++VDE+HER +DF+LAIIRD+L L+LIL
Sbjct: 722 LQTSG-GRVEDVVASLA--DVS---HVVVDEVHERSLDTDFLLAIIRDVLYKRRDLKLIL 775
Query: 355 MSATLDADRFSQYFG------GCPVIQVPGFTYPVKSFYLEDVL-----SILKSAESNHL 403
MSATLDA F YF ++++ G TYPV+ +YL+DV+ SI + E +
Sbjct: 776 MSATLDAASFKDYFTVDGKNVSVGLVEISGRTYPVQDYYLDDVIHMTGFSIGNNREYYYD 835
Query: 404 DSA---SLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELV 445
D+A S PN+DP +++ I S +D+L+E V
Sbjct: 836 DNAGSKSKEDPNDDP---------INKIIQRMGSRINYDLLVETV 871
>gi|349603495|gb|AEP99318.1| putative ATP-dependent RNA helicase YTHDC2-like protein, partial
[Equus caballus]
Length = 356
Score = 239 bits (609), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 207/368 (56%), Gaps = 27/368 (7%)
Query: 26 EATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSV 85
E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R ++V
Sbjct: 3 EEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTV 62
Query: 86 CKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRG 145
K K ET + + + +K ++ L +P + E E L + RG
Sbjct: 63 -KKKDGSETAHA---MMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE-------RG 111
Query: 146 KRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSN 204
+ + + MSK + ++ + +I + R LP+ ++ I + N
Sbjct: 112 NVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKEN 169
Query: 205 QVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIG 264
+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E IG
Sbjct: 170 KVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIG 229
Query: 265 DNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVD 324
IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+IVD
Sbjct: 230 QTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVIVD 276
Query: 325 EIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVK 384
E+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G + VK
Sbjct: 277 EVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVK 336
Query: 385 SFYLEDVL 392
+LED+L
Sbjct: 337 EMFLEDIL 344
>gi|378726126|gb|EHY52585.1| DEAD/DEAH box helicase [Exophiala dermatitidis NIH/UT8656]
Length = 1350
Score = 239 bits (609), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 223/410 (54%), Gaps = 35/410 (8%)
Query: 559 SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
S G IL+F+PG +I DR L D+ + +PLH+ + +Q+ VF+ P G
Sbjct: 827 STTGGILIFMPGTMEI----DRCLR--LLNDSPRMHGLPLHASLTPAEQRLVFRPAPRGK 880
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RK++++TN+AET+ITI+D+V VID+G++KE YDP +N+ L+ W S+A+ KQR GRAG
Sbjct: 881 RKVVVATNVAETSITIEDIVAVIDTGKVKETHYDPTSNIVRLEEVWASQAACKQRRGRAG 940
Query: 679 RCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
R QAG CY L+++ A++ PE+ R P+E+LCL VK + N+E FL T+ PP
Sbjct: 941 RVQAGKCYKLFTKNVEANMAPAAAPEMHRTPLEQLCLSVKATGSDRNVEAFLASTISPPD 1000
Query: 739 SVTIRNAIIVLQDIGALSLD-EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
S + A+ L+ +GAL L+ + +T LG L + +K+L + +L DCL+P LT+A
Sbjct: 1001 SRAVATAMKTLRRMGALELETDSLTGLGTYLAMIPADLRCAKLLVYGVLFDCLEPCLTIA 1060
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ---- 853
+ PF +SP EK+ AK AS D L AFE WK GQ
Sbjct: 1061 AILTTKSPF---VSPREKR--DEAKAARASFGVADGDLLLDCMAFEQWKEMLSLGQNYRD 1115
Query: 854 -EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP-----EDVSS--------CSHNA 899
+ W CS F+S + + R+QL LI+ G +P E SS + N
Sbjct: 1116 MQDW-CSARFLSQQTLRDIDSTRRQLLDSLIETGLLPPGYRAESSSSPPGPQTQTYNRNK 1174
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
R ++ A++ L P +AR++ P K +++ + GAK L P + K
Sbjct: 1175 RNTMLLRALIAGALNPQLARIQMPDK---KYIASMTGAK-ELDPDARTIK 1220
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 148/236 (62%), Gaps = 16/236 (6%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
+++ T+R +A ++ R LP S KD I V QV LI+GETG GK+TQ QF
Sbjct: 554 LDAWTTRQRSEAQ-EEMNTGRRSLPAWSKKDAIIEAVKGGQVTLITGETGSGKSTQAIQF 612
Query: 225 LLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS 282
+L+ KG ++CTQPRR++A S+++R+S ER GD +GY IR +SK +
Sbjct: 613 ILDDAIQSMKGSKANLICTQPRRVAALSLSDRVSSERCSTEGDEVGYSIRGDSKVSSRTK 672
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
I F T GVLLR L Q + +K A ++ ++HI VDE+HER +DF+LA++RD
Sbjct: 673 ITFMTTGVLLRRL--QSSTSIKSA--------LANISHIFVDEVHERSLDTDFLLALLRD 722
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPV---IQVPGFTYPVKSFYLEDVLSIL 395
+ + P L+++LMSATL+AD F+QYFGG V + + G TYPV+ +YL+DV+ ++
Sbjct: 723 AITALPQLKIVLMSATLNADTFAQYFGGDNVVNRVHIEGRTYPVQDYYLDDVVRLV 778
>gi|403172739|ref|XP_003331885.2| hypothetical protein PGTG_13694 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169978|gb|EFP87466.2| hypothetical protein PGTG_13694 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1737
Score = 239 bits (609), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/494 (32%), Positives = 250/494 (50%), Gaps = 46/494 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFR 588
L ++ LI++ LI LL ++C + AIL+FLP + I K + L ++ F
Sbjct: 1047 LEVLDEHLINMDLIVLLLLQVCWQNPTLVQRFSSAILIFLPSLDSIRKLTEILESHAIF- 1105
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
TS F I PLHS + + Q VF+ PP G RKI++STNIAET ITI DV VIDSG+ KE
Sbjct: 1106 GTSAFQIFPLHSSISNENQSLVFQTPPAGVRKIVISTNIAETGITIPDVTCVIDSGKHKE 1165
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKR 707
YD +S L ++++K++ QR GRAGR Q GIC+HL+++ R + L D +PE+ R
Sbjct: 1166 MRYDEKRQISKLVETFIAKSNVTQRKGRAGRVQEGICFHLFTKHRMETHLADNPLPEMLR 1225
Query: 708 IPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ +++L L++K++ +IED L + LDPP +V ++ AI L ++ AL+ E++T LG
Sbjct: 1226 LSLQDLALRIKIMQIGTSIEDVLLQALDPPSTVNVQRAIASLVEVKALTPTEEITPLGRH 1285
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L + M K+L L CL PALT+A A + + PF P ++ A F++ +
Sbjct: 1286 LVKLPMDVHMGKLLILGCLFRCLSPALTVAAALNSKSPFLTPFGREQEADAIKKSFKVEN 1345
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
SD L + + W++A Q FC + +S + + +R Q L+ GF
Sbjct: 1346 -----SDFLTICKVYNSWRSAYQNDHVHQFCRKNMLSFSNLLQIEDLRSQFLGFLVDAGF 1400
Query: 888 I--------PEDVSSCSHNARVPGII------HAVLM----AGLYP---------MVARL 920
+ P S S VP + H ++M A ++P + +
Sbjct: 1401 VVPNSRSHGPGSFSQRSRFCNVPAELDLNADQHKIVMGCIGAAMFPKLLVRDGAMQIGNV 1460
Query: 921 RPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD--DCPLMVYDEITRGDGGMHVRNC 978
+ G R + + A + HP S+NF S ++ D D + Y I + +++
Sbjct: 1461 NSNAQGGWRTLTNSAPASI--HPSSVNFS-SGRRPDFGDARFVTYFNIMQSK-KLYIWES 1516
Query: 979 TVVGPLPLLLLATE 992
VV + LL E
Sbjct: 1517 GVVNEKAIFLLCGE 1530
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 145/216 (67%), Gaps = 20/216 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R+ LPI+ ++ I + V+ NQV+L+ GETGCGK+TQ+P F+LEH + G KI CTQPR
Sbjct: 784 RATLPIAVYRPQIVAAVEQNQVILLCGETGCGKSTQLPAFILEHELANGRPVKIFCTQPR 843
Query: 245 RISATSVAERISVERGE------NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+AER+S E GE +G +GY IRLESK S +V+ T GV+LR+L
Sbjct: 844 RISAISLAERVSQELGEPTGAVGQVGSLVGYNIRLESKTSATSRLVYATTGVVLRML-EN 902
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G D+ +TH+I+DEIHER SDF+L ++ +L P+LR+ILMSAT
Sbjct: 903 GT-------------DLQDITHLILDEIHERSIDSDFLLVALKTILERRPNLRVILMSAT 949
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+DA++ S Y GCP+++VPG T+PV SF+LEDV+ +
Sbjct: 950 VDAEKISNYMNGCPILKVPGRTFPVTSFFLEDVIEL 985
>gi|320591556|gb|EFX03995.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 1509
Score = 239 bits (609), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 165/531 (31%), Positives = 260/531 (48%), Gaps = 64/531 (12%)
Query: 503 EQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE-- 560
E ++PE+ + +K + N +++ Q +D+Y I L+ QL+ ++ D E
Sbjct: 920 ETSSKPELLKTLKGY-SNRTRNTLSQ--MDEYQ-------IPFELVVQLIGRVATDPEYE 969
Query: 561 --DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
AILVFLPG +I D L+ + F + ++I PLHS + + +Q+ F PP G
Sbjct: 970 RYSRAILVFLPGIAEIRALNDLLVGDRAF--AAGWLIYPLHSTIATEEQEAAFLVPPAGF 1027
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKI+L+TNIAET ITI DV V+D+G+ +E YD +S L +++S+A+AKQR GRAG
Sbjct: 1028 RKIVLATNIAETGITIPDVTCVVDTGKHREMRYDERRQLSRLIDTFISRANAKQRRGRAG 1087
Query: 679 RCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
R Q G+C+HL+++ R L D Q PE+ R+ +++L ++VK+ IE+ L + LDPP
Sbjct: 1088 RVQEGLCFHLFTRYRHDQVLSDQQTPEMLRLSLQDLAIRVKMCRIGA-IEETLGQALDPP 1146
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
+ +R AI L D+ AL+ E++T LG +L L + + K++ + CLD A+T+A
Sbjct: 1147 SAKNMRRAIDALVDVRALTAGEELTPLGMQLARLPLDVFLGKLVLMGTVFRCLDMAITVA 1206
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ------R 851
+ PF P +RA A L G SD L + A+ WK Q
Sbjct: 1207 AVLSSKSPFVAPFG----QRAQADAVRLG-FRRGDSDLLTIYNAYLAWKRVCQSAAGAAS 1261
Query: 852 GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP---------------------- 889
GQE FC + F+S + + ++ QL L+ +GF+P
Sbjct: 1262 GQEFQFCRKNFLSPQTLANIEDLKGQLLVSLVDSGFLPLTDDERRNLGRLRYAGSSGRGG 1321
Query: 890 ------EDV-SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLH 942
DV + N+ V + AV+ YP + +R G +RLH
Sbjct: 1322 RRRQAFFDVPQRVNSNSDVDVVAQAVIAWSFYPKLL-VRDAGGGGTGLRNIGNNQTIRLH 1380
Query: 943 PHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
P S+N + +D + Y I + + T V LP+ LL ++
Sbjct: 1381 PSSVN-----RGRNDLHWLSYYHIMQAKSVYNAHETTAVEALPIALLCGDL 1426
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 149/220 (67%), Gaps = 20/220 (9%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+++ R +LP+ +F+ + TVD QVV++ GETGCGK+TQVP FLLEH S+G+ CK+ C
Sbjct: 689 MLQSRMQLPMWAFRQQVLDTVDREQVVIVCGETGCGKSTQVPSFLLEHQLSQGKPCKVYC 748
Query: 241 TQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A R+S E GE D +G+ IRLE+ K + +V+ T G+++R+
Sbjct: 749 TEPRRISAISLARRVSEELGEGRNDVGTLRSLVGFSIRLEANTSKETRLVYATTGIVMRM 808
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L +G + L+E +TH+++DE+HER SDF+L +++ +L L+++L
Sbjct: 809 L--EGSNELRE------------ITHLVLDEVHERSIDSDFLLIVLKKLLVRRQDLKVVL 854
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
MSAT+DADRFSQY GG PV+ VPG T+PV+ YLED + +
Sbjct: 855 MSATVDADRFSQYLGGAPVLNVPGRTFPVQVRYLEDAVEL 894
>gi|164426163|ref|XP_961050.2| hypothetical protein NCU01143 [Neurospora crassa OR74A]
gi|18376272|emb|CAD21386.1| conserved hypothetical protein [Neurospora crassa]
gi|157071222|gb|EAA31814.2| hypothetical protein NCU01143 [Neurospora crassa OR74A]
Length = 1391
Score = 239 bits (609), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 230/417 (55%), Gaps = 38/417 (9%)
Query: 551 LLRKIC-MDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVP 603
L+ +C +DSE G IL+FLPG +IN+ + L A P ++PLH+ +
Sbjct: 867 LVETVCAIDSELAETQKAGGILIFLPGVAEINRACNALRAVPSLH------VLPLHASLE 920
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+ +QK+VF PPG RK++++TN+AET+ITIDD+V VIDSGR+KE S+DP NN+ L+ +
Sbjct: 921 TKEQKRVFASAPPGKRKVVIATNVAETSITIDDIVAVIDSGRVKETSFDPQNNMRKLEET 980
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYS---QLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
W S+A+ KQR GRAGR QAG CY L++ +++ A PD PEI+R+P+E+LCL V+ +
Sbjct: 981 WASRAACKQRRGRAGRVQAGKCYKLFTRNLEMQMAERPD---PEIRRVPLEQLCLAVRAM 1037
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
++ FL + PP + + +I +L+ +GAL E++T LG++L + K+
Sbjct: 1038 GIK-DVSHFLSRAPTPPEATAVEASITMLRRMGALD-GEELTALGQQLAMIPADLRCGKL 1095
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ + + CLD +T+A + PF +SP EK+ AK G D L +
Sbjct: 1096 MVYGSIFGCLDDCVTIAAILSTKSPF---VSPQEKRE--EAKEARKRFSQGDGDLLTDLR 1150
Query: 841 AFECWKNAKQR--GQ---EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC 895
AF+ W + Q GQ AW C F++ ++ + R Q + L + G IP + S
Sbjct: 1151 AFQEWNDQMQERMGQSRVRAW-CGDNFLNYQTLSDIASTRSQYYSALKEMGIIPHNYSES 1209
Query: 896 --SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKL 950
S + ++ A+ + P +AR++ P K +F + GA V L P + K
Sbjct: 1210 NNSQQTKSMALLRALTASAFSPQIARIQFPDK---KFAASMTGA-VELDPEAKTIKF 1262
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 169/285 (59%), Gaps = 31/285 (10%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--E 234
+ ++++ R LP +D + TV NQV +ISGETG GK+TQ QF+L+ ++SKG +
Sbjct: 602 SYKKMLYARQNLPAWQVQDYLIQTVSENQVTIISGETGSGKSTQSVQFILDDLYSKGLGK 661
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
+ I+ TQPRRISA +A+R+S ER +G +GY IR ESK ++ I F T GVLLR
Sbjct: 662 SANIIVTQPRRISALGLADRVSDERCSQVGQEVGYSIRGESKTSPNTRITFVTTGVLLRR 721
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L + G R+++ A DVS H++VDE+HER +DF+LAIIRD+L L+LIL
Sbjct: 722 LQTSG-GRVEDVVASLA--DVS---HVVVDEVHERSLDTDFLLAIIRDVLYKRRDLKLIL 775
Query: 355 MSATLDADRFSQYFG------GCPVIQVPGFTYPVKSFYLEDVL-----SILKSAESNHL 403
MSATLDA F YF ++++ G TYPV+ +YL+DV+ SI + E +
Sbjct: 776 MSATLDAASFKDYFTVDGKNVSVGLVEISGRTYPVQDYYLDDVIHMTGFSIGNNREYYYD 835
Query: 404 DSA---SLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELV 445
D+A S PN+DP +++ I S +D+L+E V
Sbjct: 836 DNAGSKSKEDPNDDP---------INKIIQRMGSRINYDLLVETV 871
>gi|46125529|ref|XP_387318.1| hypothetical protein FG07142.1 [Gibberella zeae PH-1]
Length = 1348
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 226/407 (55%), Gaps = 28/407 (6%)
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
++ + + G IL+FLPG +IN+ A + S ++PLH+ + + +QK+VF
Sbjct: 831 ELSYEKKSGGILIFLPGVGEINQ------ACRALKAISSLHVLPLHASLETREQKRVFSS 884
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PPPG RKI+++TN+AET+ITIDD+V VIDSG++KE S+D NN+ L+ +W S+A+ KQR
Sbjct: 885 PPPGKRKIVVATNVAETSITIDDIVAVIDSGKVKETSFDVQNNMRKLEETWASRAACKQR 944
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGR Q G CY L++Q +P+ PEI+R+P+E+LCL V+ + ++ FL ++
Sbjct: 945 RGRAGRVQEGRCYKLFTQKLEEQMPERPEPEIRRVPLEQLCLSVRAMGMK-DVAGFLGRS 1003
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
PP + I A+ +L+ +GAL DE +T +G++L L K++ F + CL
Sbjct: 1004 PTPPDATAIDGAMKLLRRMGALDGDE-LTAMGQQLAMLPADLRCGKLMVFGAIFGCLGDC 1062
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAK---- 849
+T+A R PF +SP E++ AK + Y G D L + AF+ W +
Sbjct: 1063 VTIAAILSTRSPF---LSPQERR--DEAKEARMNFYSGDGDLLTDLQAFQEWDSMMQDRL 1117
Query: 850 -QRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDVSSCSHNARVPG---- 903
QR +W C + F++ ++ + R Q L + G + P + SS +H
Sbjct: 1118 PQRQVRSW-CEENFLNFQTLSDISNTRAQYYAALAEIGIVAPSEASSEAHARETSSDGSQ 1176
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKL 950
++ A++ A P +AR++ P K +F + GA V L P + + K
Sbjct: 1177 LLRALVAAAFTPQIARIQYPDK---KFASSMSGA-VELDPEAKSIKF 1219
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 151/248 (60%), Gaps = 13/248 (5%)
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
PKM K K R + +L+ ++ +R KLP ++ I TV SN V +ISGET
Sbjct: 546 PKMIKWVKDEKNREQWLRRQGSTSLKDMISKRQKLPAWQMREAIIGTVRSNHVTIISGET 605
Query: 214 GCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
G GK+TQ QF+L+ + ++G ++ TQPRRISA +A+R++ ER +G+ +GY I
Sbjct: 606 GSGKSTQSMQFILDDLCAQGLGGCANMIVTQPRRISALGLADRVAEERCSRVGEEVGYAI 665
Query: 272 RLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
R ESK K + I F T GVLLR L + G R+++ A DVS H+++DE+HER
Sbjct: 666 RGESKRSKDTRITFVTTGVLLRRLQTSG-GRVEDVVASLA--DVS---HVVIDEVHERSL 719
Query: 332 YSDFMLAIIRDMLPSYPH-LRLILMSATLDADRFSQYFG--GCPV--IQVPGFTYPVKSF 386
+DF+L +IR+++ S L+LILMSATLDA F YF G V +++ G T+PV +
Sbjct: 720 DTDFLLNLIREVMKSKKDMLKLILMSATLDAATFKNYFASEGLSVGTVEIEGRTFPVDEY 779
Query: 387 YLEDVLSI 394
YL+DV+ +
Sbjct: 780 YLDDVIRM 787
>gi|157123425|ref|XP_001653827.1| ATP-dependent RNA helicase [Aedes aegypti]
gi|108882920|gb|EAT47145.1| AAEL001719-PA [Aedes aegypti]
Length = 1052
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 230/452 (50%), Gaps = 21/452 (4%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
LI +L+ I +GAILVFLP I + L ++ S +I PLHS VP +
Sbjct: 512 LIVELICHITYSKPEGAILVFLPSLAQITEVHKLLTSHRRLSQMST-LIYPLHSKVPQLD 570
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
QK VF RP PG RK+IL+TNIAET+ITIDDVVYVI++GR K Y+ + +S+L+ W+S
Sbjct: 571 QKAVFSRPRPGTRKVILATNIAETSITIDDVVYVINAGRHKINMYE--DGISSLRDEWIS 628
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
++ QR GRAGR Q G+CYHLY++ R L PEI R+ ++E+ L +K+L +
Sbjct: 629 ISNEIQRKGRAGRVQPGVCYHLYTRARRNVLLQNTPPEILRVALDEVILHIKILALG-DA 687
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL+K LD P I ++ +L + A+ +E +T LG L L + P KM+ + +
Sbjct: 688 RRFLEKLLDRPSDAVIEESLELLNRLNAIDDNETLTPLGYHLARLPMDPRTGKMVLLSSI 747
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
C DP ++A + ++D F P ++ +F G SD L + W
Sbjct: 748 FSCTDPITSIAASLSFKDAFYKPFGKEKEVDRVRRRFA----EGFHSDHLMLANVIHQWS 803
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE---DVSSCSHNARVPG 903
R + F + F++ +N L M+ Q F+ + S +HN+
Sbjct: 804 QLSYR-ELPDFARRNFLNQTTLNQLCSMKAQFCEYFHAAKFLNHAQPEAHSNNHNSGNDK 862
Query: 904 IIHAVLMAGLYPMVARLRPPHKN-----GRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC 958
++ A++ AGLYP VA +R +N GR + G + +HP S+N L D
Sbjct: 863 LLTAIVGAGLYPNVAFVRKVIRNRHNADGRAILAIEGQGRATIHPSSVNSTLG--NYDSN 920
Query: 959 PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
++ YD+ + + + + TVV P PL
Sbjct: 921 FVVYYDKQKISE--LTIFDTTVVNPFPLFFFG 950
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 148/215 (68%), Gaps = 18/215 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVCTQ 242
R KLP K I +D++QV+L+ GETG GKTTQ+PQ++L+ + +G C+I+CTQ
Sbjct: 253 REKLPAFGSKQNILEMIDAHQVILVKGETGSGKTTQIPQYILDQAMLQGRGSECRIICTQ 312
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH--SSIVFCTNGVLLRLLVSQGV 300
PRRISA +++ER++ ERGEN+G ++GY+IRL+SK ++ +SI FCT G++L ++ S
Sbjct: 313 PRRISAITLSERVAAERGENLGKSVGYQIRLDSKKPRNEGASITFCTTGIVLSIMQSD-- 370
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
P D S H+I+DEIHERD +D +L I + +LP L++ILMSATL
Sbjct: 371 ---------PCLKDYS---HLILDEIHERDVITDLLLGITKMILPYRRDLKIILMSATLT 418
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
AD FS YF CP++++PG T+PV+ FYLEDV++ L
Sbjct: 419 ADTFSDYFNNCPMVEIPGLTFPVQEFYLEDVVAEL 453
>gi|20197581|gb|AAD14515.3| putative RNA helicase A [Arabidopsis thaliana]
Length = 749
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 175/282 (62%), Gaps = 4/282 (1%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L+ P+ I LIE LL IC + G IL+FL GW+DI+ +++L +P F + +
Sbjct: 471 LSCWYPDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVM 530
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++ H + + +Q+ +F+ P G RKI+L+TNIAET+ITI+DV +VID G+ KE SYD
Sbjct: 531 LLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDAL 590
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN L SW+SK SA+QR GRAGR + G CYHLY + + ++Q+PEI R P+ LC
Sbjct: 591 NNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLC 650
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K L+ +I +FL + L P + ++ AI L+ IGAL +E +T LG L L +
Sbjct: 651 LQIKSLNLG-SISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPME 709
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
P + KML ++ CLDP LT+A RDPF ++P +KK
Sbjct: 710 PKLGKMLILGAILGCLDPILTVAAGLSVRDPF---LTPQDKK 748
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 154/220 (70%), Gaps = 16/220 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETC 236
+++++ R+ LP + + + + NQV++ISGETGCGKTTQ+PQF+LE ++G
Sbjct: 210 QRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFS 269
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I+CTQPRRISA SV+ER++ ERGE +G+++GYK+RLE G+ + ++FCT G+LLR L+
Sbjct: 270 SIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLL 329
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
V R ++ +TH+IVDEIHER DF+L I++D+L L+LILMS
Sbjct: 330 ---VDR-----------NLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMS 375
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
ATLDA+ FS YFGG VI +PGFTYPV+S +LED+L + +
Sbjct: 376 ATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTR 415
>gi|408396568|gb|EKJ75724.1| hypothetical protein FPSE_04106 [Fusarium pseudograminearum CS3096]
Length = 1348
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 226/407 (55%), Gaps = 28/407 (6%)
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
++ + + G IL+FLPG +IN+ L A S ++PLH+ + + +QK+VF
Sbjct: 831 ELSYEKKSGGILIFLPGVGEINQACRALKA------ISSLHVLPLHASLETREQKRVFSS 884
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PPPG RKI+++TN+AET+ITIDD+V VIDSG++KE S+D NN+ L+ +W S+A+ KQR
Sbjct: 885 PPPGKRKIVVATNVAETSITIDDIVAVIDSGKVKETSFDVQNNMRKLEETWASRAACKQR 944
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGR Q G CY L++Q +P+ PEI+R+P+E+LCL V+ + ++ FL ++
Sbjct: 945 RGRAGRVQEGRCYKLFTQKLEEQMPERPEPEIRRVPLEQLCLSVRAMGMK-DVAGFLGRS 1003
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
PP + I A+ +L+ +GAL DE +T +G++L L K++ F + CL
Sbjct: 1004 PTPPDATAIDGAMKLLRRMGALDGDE-LTAMGQQLAMLPADLRCGKLMVFGAIFGCLGDC 1062
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAK---- 849
+T+A R PF +SP E++ AK + Y G D L + AF+ W +
Sbjct: 1063 VTIAAILSTRSPF---LSPQERR--DEAKEARMNFYSGDGDLLTDLQAFQEWDSMMQDRL 1117
Query: 850 -QRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDVSSCSHNARVPG---- 903
QR +W C + F++ ++ + R Q L + G + P + SS +H
Sbjct: 1118 PQRQVRSW-CEENFLNFQTLSDISNTRAQYYAALAEIGIVAPSEASSEAHARETSSDGSQ 1176
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKL 950
++ A++ A P +AR++ P K +F + GA V L P + + K
Sbjct: 1177 LLRALVAAAFTPQIARIQYPDK---KFASSMSGA-VELDPEAKSIKF 1219
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 156/262 (59%), Gaps = 18/262 (6%)
Query: 140 SDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITS 199
+ K R RV PKM K K R + +L+ ++ +R KLP ++ I
Sbjct: 537 TQKKRPARV-----PKMIKWVKDEKNREQWLRRQGSTSLKDMISKRQKLPAWQMREAIIG 591
Query: 200 TVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISV 257
TV SN V +ISGETG GK+TQ QF+L+ + ++G ++ TQPRRISA +A+R++
Sbjct: 592 TVRSNHVTIISGETGSGKSTQSMQFILDDLCAQGLGGCANMIVTQPRRISALGLADRVAE 651
Query: 258 ERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA 317
ER +G+ +GY IR ESK K + I F T GVLLR L + G R+++ A DVS
Sbjct: 652 ERCSRVGEEVGYAIRGESKRSKDTRITFVTTGVLLRRLQTSG-GRVEDVVASLA--DVS- 707
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-LRLILMSATLDADRFSQYFG--GCPV- 373
H+++DE+HER +DF+L +IR+++ S L+LILMSATLDA F YF G V
Sbjct: 708 --HVVIDEVHERSLDTDFLLNLIREVMKSKKDMLKLILMSATLDAATFKNYFASEGLSVG 765
Query: 374 -IQVPGFTYPVKSFYLEDVLSI 394
+++ G T+PV +YL+DV+ +
Sbjct: 766 TVEIEGRTFPVDEYYLDDVIRM 787
>gi|340714916|ref|XP_003395968.1| PREDICTED: dosage compensation regulator-like [Bombus terrestris]
Length = 1236
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 244/464 (52%), Gaps = 20/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + I LIE LL+ I + GAIL+FLPGW I L +P + +S ++
Sbjct: 621 MAQLNEKEISFELIEALLKHIKKQNISGAILIFLPGWNLIFALMKHLQQHPIYGGSS-YM 679
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS +P Q KVF+ P KIIL+TNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 680 IIPLHSQLPREDQHKVFEPVMPEITKIILATNIAETSITINDVVYVIDSCKAKMKLFTSH 739
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGYCFHLCSKARYNKMDEHMTPEMFRTPLHELA 799
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL K ++PP + A +VL+++ L + ++T LG+ L L +
Sbjct: 800 LSIKLLRLG-SIGKFLSKAIEPPPIDAVIEAEVVLREMKCLDENNELTPLGKILARLPIE 858
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + C+ AL+ A+ + P+ ++ + K + Y SD
Sbjct: 859 PRLGKMMILGCIF-CVGDALSTMAANSTTFLEVYNMGPDLRRLSAQQKSFAGARY---SD 914
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A++ AF+ W+ A+ G +E FC +S + + + QLQ L+ GF + +
Sbjct: 915 HVAMLHAFQAWEEARSMGEYEEQTFCDSKNLSMPTLRVTWEAKNQLQALLVSAGFPEKTL 974
Query: 893 SSCSHNARVPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
S N I A+L GLYP V HK R+ + T A + +H S+N
Sbjct: 975 SPTPLNYHAGADTRLDTITALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVN 1029
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
+F++ PL V+ E R + + T+V P+ LLL +
Sbjct: 1030 CS-NFEQNFPFPLFVFGEKIRTR-AVSCKQMTMVSPIHLLLFGS 1071
Score = 216 bits (550), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 156/227 (68%), Gaps = 19/227 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R+++D L++ ++ERS LP+ S K+ I + ++ N +++I G TGCGKTTQV QF+L+
Sbjct: 365 RLQEDERLQKSIKERSYLPVFSMKNEIMNAINENPIIIIRGNTGCGKTTQVCQFILDDYI 424
Query: 231 SKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+ G+ +C I TQPRRISA SVA+R+++ER E++G ++GY +R ES + + SI+FCT
Sbjct: 425 ASGQGASCSIAITQPRRISAVSVADRVALERCEDLGLSVGYSVRFESYLPRPYGSIMFCT 484
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+ Y
Sbjct: 485 IGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHIY 528
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
P LR+ILMSAT+D FS YF CPVI++PG +YPV+ ++LED + +
Sbjct: 529 PDLRIILMSATVDTTLFSNYFNNCPVIEIPGRSYPVQQYFLEDCIQL 575
>gi|406695479|gb|EKC98784.1| DEAH RNA helicase [Trichosporon asahii var. asahii CBS 8904]
Length = 1568
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 208/376 (55%), Gaps = 17/376 (4%)
Query: 537 TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN----PF----FR 588
T N I L+ + + S+DG +LVFLPGW++I K D LL N P F
Sbjct: 858 TSNELEIPYPLMALTIAHVLRQSDDGHVLVFLPGWDEIKKVADILLDNSGKYPLLGLNFN 917
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
D S+F + LHS +P+ +Q++VFK PPPG R+IIL+TNIAET++TI DVVYV+DS R+KE
Sbjct: 918 DASEFSVHYLHSTIPAAEQREVFKPPPPGVRRIILATNIAETSVTIPDVVYVVDSARVKE 977
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRI 708
K YDP ++S+L S+WV ++ QRAGRAGR + G + L S+ R SL Q+ E+KR
Sbjct: 978 KRYDPDRHMSSLVSAWVGSSNLGQRAGRAGRHREGEYFGLLSRRRLESLDPHQLVEMKRS 1037
Query: 709 PIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
+ + + VK L+ +ED L +T++PP + A+ L+ +GAL D+ +T LG L
Sbjct: 1038 DLSNVVMHVKALNLG-EVEDVLAQTIEPPEPPRVMAAMDTLRMLGALDGDQNLTSLGRVL 1096
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K+ F CLD ALTLA RDPF P+ ++ A + +
Sbjct: 1097 LQLPVDAAIGKLCLFGSFFRCLDSALTLAAVLTNRDPFIAPLLVKQEADAVKDSWSPVAF 1156
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
+SD AV+AAF W RG+ F S F+S + + ++ L L +
Sbjct: 1157 ---RSDPFAVVAAFNQWSLMDDRGEFGAANRFASDNFLSKPTLLQIKQVKGSLLQSLEQA 1213
Query: 886 GFIPEDVSSCSHNARV 901
G I VS+ H R+
Sbjct: 1214 GII--SVSAGGHVPRI 1227
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 153/259 (59%), Gaps = 18/259 (6%)
Query: 157 SKAEIAMKVESLTSRI---EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
S +E+ K +L R+ E D L ++ + R+ LP+ + I + ++ N V ++ T
Sbjct: 571 SASELQAKSMALQDRLADYETDPKLEKMRDTRAALPVHTKATDILARIEVNDVTIVMAAT 630
Query: 214 GCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
G GKTTQVPQ +L+ ++G+ C IVCTQPRR++A SVAER++ ERG+ +G +GY++
Sbjct: 631 GSGKTTQVPQLILDDWINRGDGAKCNIVCTQPRRLAAMSVAERVADERGQPLGREVGYQV 690
Query: 272 RLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
R + K + SI FCT G+ L+ + S L +N + + +TH++VDE+HERD
Sbjct: 691 RFDVKVPQPDGSITFCTTGIFLKRMQSA----LGSNANPESVAAMDQVTHVVVDEVHERD 746
Query: 331 RYSDFMLAIIR----DMLPSYPHLRLILMSATLDADRFSQYF----GGCPVIQVPGFTYP 382
+D +L +++ D ++++LMSAT+D F +YF G PV +VPG T+P
Sbjct: 747 VDTDLLLVVLKRLLADRKARRKPIKIVLMSATIDPTLFQRYFADERGLAPVAEVPGRTFP 806
Query: 383 VKSFYLEDVLSILKSAESN 401
V+ YL++ L L++ N
Sbjct: 807 VERHYLDEFLGQLQNIPRN 825
>gi|301109265|ref|XP_002903713.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262096716|gb|EEY54768.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 1435
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 251/502 (50%), Gaps = 52/502 (10%)
Query: 536 ATVNPELIDLVLIEQLLRKICMDSED--GAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
A V+ ID LI L+R + ++ GAILVFLPG +I + + +L + +SK
Sbjct: 875 ARVDDSKIDYDLILHLVRHLVLNKSQSSGAILVFLPGTAEIKRLIE-MLTHGNGGLSSKV 933
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+PLH + Q VFK P G K+I+STNIAET+ITI+D+ VIDSG++KE YD
Sbjct: 934 WALPLHGSLSGADQAMVFKSAPSGKTKVIVSTNIAETSITINDITAVIDSGKVKEMVYDN 993
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
S L W S+A+ QR GRAGR QAG CY L+S+ R A++ EI R+ +E+L
Sbjct: 994 RARRSQLLDCWASRAACDQRKGRAGRVQAGTCYRLFSRKRFAAMDAQLSAEIHRVSLEQL 1053
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-------------DEK 760
CLQ+K L+ +I+ FL K ++PP I A+ L DI AL DE+
Sbjct: 1054 CLQIKKLELG-SIKGFLSKAIEPPKEDAIDAAVQELVDIAALRTVGESPKNKLRGNNDEE 1112
Query: 761 V--TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPIS-PNEKKR 817
V T LG L L + + K L + ++ C++P +A R+PF + +S P + +
Sbjct: 1113 VILTPLGNHLAMLPLDARIGKFLVYGSILRCIEPVAIIAACISSRNPFLMSMSDPELRAK 1172
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQ 877
A K EL + +SD L + E + + + + FC +S M +L +++Q
Sbjct: 1173 QDALKKELGGSW--KSDHLLLWKLVERYSPLRGQKSKRGFCRDIGLSYDTMESILDLKQQ 1230
Query: 878 LQTELIKNGFIPEDVSSCSH---NARVPGIIHAVLMAGLYPMVARLRPPH---------- 924
+L GF + SS H N++ P II A L AGLY VA++ P
Sbjct: 1231 YLQQLDNIGFY--ESSSADHLNENSKAPRIIKAALCAGLYANVAQVVYPEQKYFQAAHGV 1288
Query: 925 -------KNGRRFVETAGGA----KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
K R FV +A A +V LHP S NF + D P ++Y E+ + +
Sbjct: 1289 VEEDHNAKQIRYFVRSASEAGQRERVFLHPSSCNFS---QNNYDSPWLLYTELVQ-TSKI 1344
Query: 974 HVRNCTVVGPLPLLLLATEIAV 995
VR T+V P LLL + V
Sbjct: 1345 FVRESTMVNPYALLLFGGHLEV 1366
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 169/261 (64%), Gaps = 30/261 (11%)
Query: 141 DKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDA--NLRQIVEERSKLPISSFKDVIT 198
+KT+ KRVD+ + S+ + L SR KD+ N +Q++ R+KLP + +
Sbjct: 594 NKTQTKRVDVEAVRRASE-------KLLQSRRAKDSQQNFQQMLAARAKLPAGKEETQVI 646
Query: 199 STVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERIS 256
V +NQVVL+ G TGCGKTTQ+PQF+L+ ++G C I+CTQPRRI+A VA R++
Sbjct: 647 KCVQNNQVVLVCGATGCGKTTQIPQFILDEYINRGAGGECNIICTQPRRIAAIGVATRVA 706
Query: 257 VERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVS 316
ER E I D +GY+IR+++K ++ ++FCT GVLLR L++ +S
Sbjct: 707 QERCEEIADVVGYQIRMDAKKSSNTRLLFCTTGVLLRRLLND--------------RQLS 752
Query: 317 ALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG-----C 371
++H+IVDE+HER+ +DF+L+I+RD+LP LR+ILMSAT++++ F +YF C
Sbjct: 753 GVSHVIVDEVHERNVDTDFLLSILRDLLPQRRDLRVILMSATMNSELFVKYFSSIPSTPC 812
Query: 372 PVIQVPGFTYPVKSFYLEDVL 392
PV+ +PGFTYPV+ +LE+VL
Sbjct: 813 PVLDIPGFTYPVECNFLEEVL 833
>gi|403414197|emb|CCM00897.1| predicted protein [Fibroporia radiculosa]
Length = 1474
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/467 (33%), Positives = 239/467 (51%), Gaps = 55/467 (11%)
Query: 524 DSMKQ--QLLDKY----LATVN---PELIDLVLIEQLLRKICMDSE-----DGAILVFLP 569
DSM++ +L +Y AT+N L+ LI +LL +C++ E AIL+F+P
Sbjct: 895 DSMQENVKLEKRYSSSTAATINRLDERLVPFDLIIRLLEHVCLEDETYVPYSSAILIFMP 954
Query: 570 GWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAE 629
G +I + D L+ +P F KF I PLHS + S Q VF PPPG RKI+++TNIAE
Sbjct: 955 GMAEIRRLNDMLMEHPAFASDDKFKIYPLHSTISSEHQGAVFDIPPPGIRKIVIATNIAE 1014
Query: 630 TAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY 689
T ITI D+ VID+G+ +E +D +S L ++V+K++A QR GRAGR Q+G+C+HL+
Sbjct: 1015 TGITIPDITCVIDTGKHREMRFDEKRQISRLIETYVAKSNAAQRRGRAGRVQSGLCFHLF 1074
Query: 690 SQLR----AASLPDFQVPEIKRIPIEELCLQVKLLDP--NCNIEDFLQKTLDPPVSVTIR 743
++ R A PD PE+ R+ + +L L++K++ +IED L + LDPP+ V I+
Sbjct: 1075 TKTRHDTKMAPHPD---PEMMRLSLSDLALRIKIMKVKLGSSIEDVLSRALDPPLPVNIQ 1131
Query: 744 NAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYR 803
A+ L + AL+ E++T +G L L + K L A L CLD ALT+A + +
Sbjct: 1132 RAVSAL--VRALTTAEEITPMGRLLSKLPTDVHLGKFLLIATLFRCLDTALTIAATLNSK 1189
Query: 804 DPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFV 863
PF P+ ++ + F + + SD L + AF W+ A G FC F+
Sbjct: 1190 SPFVSPLGREQEADRAKSSFRVEN-----SDFLTIHNAFSSWRRACTNGVSRKFCRDSFL 1244
Query: 864 SSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNAR------------VPG-------- 903
S + + +R+Q L+ + FI + + +R VP
Sbjct: 1245 SHQNLQQIEELRQQFLGYLVDSSFIQVNRTFVKELSRARYSRGKARFVSVPPELDVNSDN 1304
Query: 904 --IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+++A L AGLYP + L NG T HP S+NF
Sbjct: 1305 IFLLNAALGAGLYPKI--LSVDSTNGDMKTITNNQTAF-FHPSSINF 1348
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 151/224 (67%), Gaps = 13/224 (5%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
++++ +R +LPI+ +++ ITS +D++Q++++SGETGCGK+TQVP F+LE SKG+ CKI
Sbjct: 639 QEMLRQRDQLPIARYRNEITSILDTSQILVLSGETGCGKSTQVPAFILEDRLSKGQPCKI 698
Query: 239 VCTQPRRISATSVAERISVERGE------NIGDNIGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A+R+S E GE G +GY IRLES + + + TNG+ L
Sbjct: 699 YCTEPRRISAISLAQRVSKELGEPSGVVGTAGSIVGYSIRLESNITSRTQLAYVTNGIAL 758
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L K + +TH+I+DE+HER SDF+L +++ +L P L++
Sbjct: 759 RMLEGGTGQGGKGTA-------FDEITHVIIDEVHERTIESDFLLIVLKSLLHERPDLKI 811
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+LMSAT+DAD+ S YFGG PV+QVPG T+PV +LED + + +
Sbjct: 812 VLMSATVDADKISHYFGGAPVLQVPGRTFPVDVRFLEDAIELTR 855
>gi|302909139|ref|XP_003050007.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256730944|gb|EEU44294.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1349
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 228/406 (56%), Gaps = 28/406 (6%)
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
++ + + G IL+FLPG +IN++ L A S ++PLH+ + + +QK+VF
Sbjct: 832 ELSYEKKTGGILIFLPGVGEINQSCRALKA------ISSLHVLPLHASLETREQKRVFTN 885
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
P G RK++++TN+AET+ITIDD+V VIDSG++KE S+D NN+ L+ +W S+A+ KQR
Sbjct: 886 APHGKRKVVVATNVAETSITIDDIVVVIDSGKVKETSFDVQNNMRKLEETWASRAACKQR 945
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGR Q G CY L++Q +P+ PEI+R+P+E+LCL V+ + ++ FL ++
Sbjct: 946 RGRAGRVQEGQCYKLFTQKLEQQMPERPEPEIRRVPLEQLCLSVRAMGMR-DVAGFLGRS 1004
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
PP + I A+ +LQ +GAL DE +T +G++L L K++ F + CLD
Sbjct: 1005 PTPPDATAIDGAMRLLQRMGALDGDE-LTAMGQQLAMLPADLRCGKLMVFGAIFGCLDDC 1063
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW-----KNA 848
+T+A R PF +SP E++ AK Y G D L + AF+ W
Sbjct: 1064 VTIAAILSTRSPF---VSPQERR--DEAKEARMIFYSGDGDLLTDLHAFQEWDAMMQDRI 1118
Query: 849 KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDVSSCSHNARV----PG 903
QR +W C ++F++ ++ + + Q T L + G + P + +S +H V P
Sbjct: 1119 PQRHVRSW-CEEHFLNFQTLSDISNTKAQYYTALGEIGIVPPSEATSEAHGRGVGSDSPQ 1177
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
++ A++ A P +AR++ P K +F + GA V L P + + K
Sbjct: 1178 LLRALVAAAFTPQIARIQYPDK---KFASSMSGA-VELDPEARSIK 1219
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 160/265 (60%), Gaps = 21/265 (7%)
Query: 137 SRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDV 196
S+K +R RV + K + ++ + + ES ++ + ++ +R +LP ++
Sbjct: 538 SQKKRPSRAPRVIKWVKDERNREQWLRRQES--------SSWKDMLSKRQRLPAWKMREA 589
Query: 197 ITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAER 254
I TV SN V +ISGETG GK+TQ QF+L+ +++ G ++ TQPRRISA +A+R
Sbjct: 590 IIGTVKSNHVTIISGETGSGKSTQSMQFVLDDLYANGLGGCANMIVTQPRRISALGLADR 649
Query: 255 ISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
++ ER +GD IGY IR ES+ K + I F T GVLLR L + G R+++ + A D
Sbjct: 650 VAEERCSRVGDEIGYAIRGESRRSKDTRITFVTTGVLLRRLQTSG-GRVEDVAASLA--D 706
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-LRLILMSATLDADRFSQYFG---- 369
VS H+++DE+HER +DF+L +IRD++ + L+LILMSATLDA F YF
Sbjct: 707 VS---HVVIDEVHERSLDTDFLLNLIRDVMKAKKDMLKLILMSATLDAATFKNYFASEGL 763
Query: 370 GCPVIQVPGFTYPVKSFYLEDVLSI 394
++++ G T+PV FYL+DV+ +
Sbjct: 764 NVGMVEIEGRTFPVDEFYLDDVIRM 788
>gi|47205228|emb|CAF92278.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1091
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 244/464 (52%), Gaps = 24/464 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A ++ + L+E LL+ I GA+LVFLPGW I + L NP F ++ +
Sbjct: 561 MALISEKETSFELVEALLKYIETLQVAGAVLVFLPGWNLIYSMQRHLETNPHF-GSNCYQ 619
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q++VF+ P K+ILSTN+AET+ITI+DVVYVIDS + K K + +
Sbjct: 620 ILPLHSQIPREEQRRVFEPVPDNVTKVILSTNLAETSITINDVVYVIDSCKQKVKLFTSH 679
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PEI R P+ E+
Sbjct: 680 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLESHMTPEIFRTPLHEVA 739
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 740 LSIKLLRLG-SIGHFLSKAIEPPPLDAVIEAEHTLKELDALDSNDELTPLGRILARLPIE 798
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-S 833
P + KM+ + D T++ AS + +PF NE KR + F + G + S
Sbjct: 799 PRLGKMMILGCIFHVGDAMCTISAASCFPEPFI-----NEGKRLS---FVHRNFTGSRFS 850
Query: 834 DQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A+++ F+ W + + G+EA FC ++ + M + QL+ L+ +GF E
Sbjct: 851 DHVALLSVFQAWDDIRMNGEEAESSFCEHKRLNMSTLRMTWEAKVQLKEILVNSGFPEES 910
Query: 892 VSSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+ + P ++ ++L G YP V HK R+ + T G A + +H S+N
Sbjct: 911 LMTQMFTTVGPDNNLDVVVSLLTFGSYPNVCF----HKEKRKILTTEGRAAL-IHKSSVN 965
Query: 948 FKLSFKK-TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+ T P V+ E R + + T+V PL LLL A
Sbjct: 966 CPFGSQDLTFPSPFFVFSEKIRTR-AISAKGMTLVTPLQLLLFA 1008
Score = 203 bits (516), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 149/233 (63%), Gaps = 28/233 (12%)
Query: 152 CKPKMSKAEIAMKVESLTSRIEKDANLR------QIVEERSKLPISSFKDVITSTVDSNQ 205
C P+ E+ E L +++ D +L+ QI+ ER +LP+ F++ I ST+D+N
Sbjct: 329 CTPEQISKELH---EELMCQLDHDESLQKQKCPFQILVERDQLPVKQFEEEILSTIDTNS 385
Query: 206 VVLISGETGCGKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENI 263
VVLI G TGCGKTTQVPQF+L+ G C IV TQPRRISA SVAER++ ERGE+
Sbjct: 386 VVLIRGATGCGKTTQVPQFILDRFIKGGRASDCNIVVTQPRRISAVSVAERVAYERGEDP 445
Query: 264 GDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
G + GY +R ES + H+SI+FCT GVLLR L + + ++H+I
Sbjct: 446 GKSCGYSVRFESVLPRPHASILFCTVGVLLRKL----------------EAGIRGISHVI 489
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQ 375
VDEIHERD +DF++ ++RD++ +YP +R++LMSAT+D F +YF CP+I+
Sbjct: 490 VDEIHERDINTDFLIVVLRDVVQAYPEVRIVLMSATIDTTMFREYFFNCPIIE 542
>gi|296478925|tpg|DAA21040.1| TPA: ATP-dependent RNA helicase A [Bos taurus]
gi|440892736|gb|ELR45806.1| ATP-dependent RNA helicase A [Bos grunniens mutus]
Length = 1287
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 241/465 (51%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL I + GA+LVFLPGW I + L NP F + ++
Sbjct: 621 MAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 679
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G KIILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 799
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 800 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 858
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 859 PRFGKMMIMGCIFYVGDAICTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 911
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF E +
Sbjct: 912 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECL 971
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 972 LTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNC 1026
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1027 PFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1070
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ +++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 356 QISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKT 415
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 416 TQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 475
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 476 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 519
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 520 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQM 578
>gi|426240004|ref|XP_004013905.1| PREDICTED: ATP-dependent RNA helicase A [Ovis aries]
Length = 1287
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 241/465 (51%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL I + GA+LVFLPGW I + L NP F + ++
Sbjct: 621 MAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 679
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G KIILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 799
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 800 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 858
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 859 PRFGKMMIMGCIFYVGDAICTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 911
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF E +
Sbjct: 912 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECL 971
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 972 LTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNC 1026
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1027 PFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1070
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ +++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 356 QISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKT 415
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 416 TQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 475
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 476 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 519
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 520 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQM 578
>gi|71153505|sp|O70133.2|DHX9_MOUSE RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; Short=mHEL-5; AltName:
Full=Nuclear DNA helicase II; Short=NDH II
Length = 1380
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 626 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF-GSHRYQ 684
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 685 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 744
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 745 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 804
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP I A L+++ AL ++++T LG L L +
Sbjct: 805 LSIKLLRLG-GIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIE 863
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 864 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 916
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC Q ++ + M + QL+ LI +GF PED
Sbjct: 917 HVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 975
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 976 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1030
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1031 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1075
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 161/242 (66%), Gaps = 20/242 (8%)
Query: 157 SKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +I+M +++ LT ++E+D NL+ +++ER LP+ F+ I + SN VV+I G TGC
Sbjct: 358 STEQISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGC 417
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQ++L+ + C IV TQPRRISA +VAER++ ERGE G + GY +R
Sbjct: 418 GKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRF 477
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + H+SI+FCT GVLLR L + + ++H+IVDEIHERD
Sbjct: 478 ESILPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDIN 521
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED +
Sbjct: 522 TDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI 581
Query: 393 SI 394
+
Sbjct: 582 QM 583
>gi|27806665|ref|NP_776461.1| ATP-dependent RNA helicase A [Bos taurus]
gi|2500541|sp|Q28141.1|DHX9_BOVIN RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; AltName: Full=Nuclear DNA
helicase II; Short=NDH II
gi|577739|emb|CAA58036.1| nuclear DNA helicase II [Bos taurus]
Length = 1287
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 241/465 (51%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL I + GA+LVFLPGW I + L NP F + ++
Sbjct: 621 MAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 679
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G KIILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 799
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 800 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 858
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 859 PRFGKMMIMGCIFYVGDAICTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 911
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF E +
Sbjct: 912 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECL 971
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 972 LTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNC 1026
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1027 PFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1070
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ +++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 356 QISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKT 415
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 416 TQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 475
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 476 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 519
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 520 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQM 578
>gi|299755543|ref|XP_001828731.2| DEAH box polypeptide 36 [Coprinopsis cinerea okayama7#130]
gi|298411272|gb|EAU92997.2| DEAH box polypeptide 36 [Coprinopsis cinerea okayama7#130]
Length = 1505
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 256/480 (53%), Gaps = 45/480 (9%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF------FRDTSKFVIIPLHS 600
LI + S+DG +LVFLPGW++I T+ R L P +TSK+ + LHS
Sbjct: 700 LIAATIAHALQSSDDGHVLVFLPGWDEIMATQ-RALQQPLGPLPIDINNTSKYSVHLLHS 758
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
VP +Q+ +F+ PPPG R++IL+TNIAET++TI DVVYV+DS ++KE Y+P ++S L
Sbjct: 759 TVPLQEQQVIFEPPPPGVRRVILATNIAETSVTIPDVVYVVDSAKVKETRYEPQRHMSAL 818
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
S+WV ++ QRAGRAGR + GI Y + S+ +AASL Q E+KR + + + VK L
Sbjct: 819 VSAWVGNSNLHQRAGRAGRHRPGIYYGILSKAQAASLRPHQTVEMKRSDLSNVVMHVKAL 878
Query: 721 D-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
+ P ++++ L T++PP + + A+ L +GA+ ++ +T LG+ L L V M +
Sbjct: 879 NFPGMSVQEVLAATIEPPEAERVEAALKNLHMVGAIDAEQTLTPLGKVLLVLPVDAQMGR 938
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
++ + CLD ALTLA RDPF P+ + KK +TA K A G +SD LA +
Sbjct: 939 LVLYGAFFKCLDQALTLAAILSNRDPFVSPL--HLKKESTAKKNSWAP-EGFRSDPLATL 995
Query: 840 AAFECWKNAKQRGQEA---WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS 896
AF W + + +GQ FC F++ + ++ +++QL + G + DVS+
Sbjct: 996 RAFNAWWDLQSKGQYVAANQFCFDNFLAKPTLLLIQKVKQQLLQAMDYAGVL--DVSAGG 1053
Query: 897 HNARVPGIIHAV------------LMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPH 944
AR+ G +V L+A L + ++ R + G + TA +HP
Sbjct: 1054 R-ARMVG--RSVPPELNINGECWPLLAALVAVASQPRFALRTGDVTLRTATDRLAFIHPS 1110
Query: 945 SLN--FKLSFKKTDDCP-----LMVYDE----ITRGDGG---MHVRNCTVVGPLPLLLLA 990
S+N + + K++ D P L Y E I++G G + T + PL LL
Sbjct: 1111 SVNNRRRQAAKESPDAPPEEKALYAYAEKRQNISQGQGSSAQTFLVTTTRLDPLIYLLFG 1170
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 139/241 (57%), Gaps = 17/241 (7%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HI-WSK 232
D + ++ R LP+ + I + N+V + TG GKTTQ+PQ +L+ HI
Sbjct: 423 DPAMEKMRNTRQALPVYTRSKAILDHISDNEVTICMAATGSGKTTQIPQLILDDHIDRGI 482
Query: 233 GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVL 291
G C I+CTQPRR++A SVA R+S ERGE +G +IGY++R E K +H S+ FCT GV
Sbjct: 483 GAECNIICTQPRRLAAISVAHRVSAERGEELGGSIGYQVRFEQKLPEEHGSVTFCTTGVF 542
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-- 349
L+ L S + ++ + ++ +THIIVDE+HERD +D +L +++ ++
Sbjct: 543 LKRLQS-----VMSGTDPRRRREMDRVTHIIVDEVHERDVDTDLLLVVLKRIMEDRKARN 597
Query: 350 --LRLILMSATLDADRFSQYF---GGCP--VIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
L+++LMSAT+D F YF G P VI VPG YPV+ +++D + L S S
Sbjct: 598 LPLKIVLMSATVDPTLFQSYFKDDSGNPAQVIDVPGRAYPVEKRFMDDFIPKLISGPSRW 657
Query: 403 L 403
L
Sbjct: 658 L 658
>gi|2961456|gb|AAC05725.1| RNA helicase A [Mus musculus]
Length = 1380
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 626 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF-GSHRYQ 684
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 685 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 744
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 745 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 804
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP I A L+++ AL ++++T LG L L +
Sbjct: 805 LSIKLLRLG-GIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIE 863
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 864 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 916
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC Q ++ + M + QL+ LI +GF PED
Sbjct: 917 HVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 975
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 976 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1030
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1031 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1075
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 161/242 (66%), Gaps = 20/242 (8%)
Query: 157 SKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +I+M +++ LT ++E+D NL+ +++ER LP+ F+ I + SN VV+I G TGC
Sbjct: 358 STEQISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGC 417
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQ++L+ + C IV TQPRRISA +VAER++ ERGE G + GY +R
Sbjct: 418 GKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRF 477
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + H+SI+FCT GVLLR L + + ++H+IVDEIHERD
Sbjct: 478 ESILPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDIN 521
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED +
Sbjct: 522 TDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI 581
Query: 393 SI 394
+
Sbjct: 582 QM 583
>gi|354481448|ref|XP_003502913.1| PREDICTED: ATP-dependent RNA helicase A [Cricetulus griseus]
Length = 1311
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 627 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF-GSHRYQ 685
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 686 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 745
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 746 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 805
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 806 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 864
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 865 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 917
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC Q ++ + M + QL+ LI +GF PED
Sbjct: 918 HVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 976
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 977 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1031
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1032 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1076
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 160/242 (66%), Gaps = 20/242 (8%)
Query: 157 SKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +I+M +++ LT ++E+D NL+ +++ER LP+ F+ I + N VV+I G TGC
Sbjct: 359 STEQISMDLKNELTYQLEQDHNLQSVLQEREMLPVKKFEPEILEAISQNSVVIIRGATGC 418
Query: 216 GKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQ++L+ G C IV TQPRRISA +VAER++ ERGE G + GY +R
Sbjct: 419 GKTTQVPQYILDDFIQNGRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRF 478
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + H+SI+FCT GVLLR L + + ++H+IVDEIHERD
Sbjct: 479 ESILPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDIN 522
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED +
Sbjct: 523 TDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI 582
Query: 393 SI 394
+
Sbjct: 583 QM 584
>gi|380489618|emb|CCF36581.1| helicase associated domain-containing protein [Colletotrichum
higginsianum]
Length = 1342
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 230/417 (55%), Gaps = 27/417 (6%)
Query: 543 IDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ L+ + +R+I D + G IL+FLPG +IN+ A R + ++PL
Sbjct: 813 INYDLLAETVREIDADLSHSHKTGGILIFLPGVAEINR------ACGALRSINSLHVLPL 866
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + + +QK+VF PP G RKI+++TN+AET+ITIDD+V VIDSG++KE +YDP NN+
Sbjct: 867 HASLETKEQKRVFTSPPSGKRKIVVATNVAETSITIDDIVAVIDSGKVKETTYDPVNNMR 926
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
L+ +W S+A+ KQR GRAGR QAG CY LY++ + + PEI+R+P+E++CL V+
Sbjct: 927 KLEENWASQAACKQRRGRAGRVQAGKCYKLYTRNLEQQMAERPDPEIRRVPLEQMCLSVR 986
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
+ N+ FL ++ PP S + AI +L+ +GAL DE +T LG++L + +
Sbjct: 987 AMGMR-NVAGFLSQSPTPPDSTAVDGAIKLLRRMGALDGDE-MTALGQQLAMIPADLRCA 1044
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K++ + + CLD + +A R PF P P+++ +A A+ ++ G D L
Sbjct: 1045 KLMVYGAIFGCLDDCVAIAAILSTRSPFMSP--PDKRDQAKDARMRFSN---GDGDLLTD 1099
Query: 839 IAAFECWKNAKQRG----QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
+ AF+ W + G Q FC F+S +N + R Q + L + G + + +
Sbjct: 1100 LEAFKQWDEMRGDGVGQRQLRNFCDDNFLSWLTLNDISATRMQYYSALSEIGIVETNRFA 1159
Query: 895 CSHNARVPG--IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
+ + G ++ A+ + P +AR++ P K +F T G K L P + K
Sbjct: 1160 AAQSRSKSGMTLLRALTASAFNPQIARIQYPDK---KFTNTVSGTK-ELDPEARTIK 1212
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 147/222 (66%), Gaps = 13/222 (5%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCK 237
+++ +R KLP ++ I +TV+ N V +ISGETG GK+TQ QF+L+ ++++G +
Sbjct: 569 KMMSKRQKLPAWQVREKIINTVEHNHVTIISGETGSGKSTQSVQFILDDLYNRGLGKCVN 628
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
++ TQPRRISA +A+R++ ER +GD IGY IR E++ ++ I F T GVLLR L +
Sbjct: 629 MLVTQPRRISALGLADRVAEERCTRVGDEIGYAIRGENRRSNNTKITFVTTGVLLRRLQT 688
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-LRLILMS 356
G ++++ + A DVS H+++DE+HER +DF+L I+R+++ + L+L+LMS
Sbjct: 689 SG-GKIEDVAASLA--DVS---HVVIDEVHERSLDTDFLLTIVREVMKERKNLLKLVLMS 742
Query: 357 ATLDADRFSQYFGG----CPVIQVPGFTYPVKSFYLEDVLSI 394
ATLDA F+ YF ++++ G TYPV +YL+D++S+
Sbjct: 743 ATLDAASFNYYFTSQGLDVGMVEIAGRTYPVDDYYLDDIISM 784
>gi|449512653|ref|XP_002190505.2| PREDICTED: probable ATP-dependent RNA helicase DHX36, partial
[Taeniopygia guttata]
Length = 721
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 221/415 (53%), Gaps = 70/415 (16%)
Query: 528 QQLLDKYLATVNPEL-------IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDR 580
+QL D+Y A+ L +DL LI L+R I ++ EDGAILVFLPGW++I+
Sbjct: 364 RQLQDRYSASTVSALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNIST---- 419
Query: 581 LLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYV 640
LH ++ S + +FK S + AE + +
Sbjct: 420 -----------------LHELLMS---QVMFK-----------SAHAAEWSAS------- 441
Query: 641 IDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDF 700
NN+ST+ + VSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+
Sbjct: 442 ---------QCSTQNNISTMAAERVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY 492
Query: 701 QVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK 760
Q+PEI R P+EELCLQ+K+L I FL K +DPP + AI L ++ AL E+
Sbjct: 493 QLPEILRTPLEELCLQIKILRLG-GIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEE 551
Query: 761 VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATA 820
+T LG L L V P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A
Sbjct: 552 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL--GKEKIADA 609
Query: 821 AKFELASLYGGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQL 878
+ EL+ +SD L V+ AF W+ A+ G E +C +YF+SS M ML M+ Q
Sbjct: 610 RRKELSK--NTKSDHLTVVNAFTGWEEARSCGLRNEKDYCWEYFLSSNTMQMLHNMKGQF 667
Query: 879 QTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
L+ GF+ P+D S + N+ ++ AV+ AGLYP VA++RP R+
Sbjct: 668 AEHLLAAGFVNSRNPKDPKSNT-NSGNEKLLKAVICAGLYPKVAKIRPSFSKKRK 721
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 170/265 (64%), Gaps = 36/265 (13%)
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEE-----------------RSKLPISSFKDV 196
P K + + VE L + E+DA+L + ++E R KLP ++
Sbjct: 72 PAWEKTSLDLDVEFLCEKTEQDADLDEQLKEDLMKKRSDPRYIEMQRFREKLPSYGMREE 131
Query: 197 ITSTVDSNQVVLISGETGCGKTTQVPQFLL-EHIWSK-GETCKIVCTQPRRISATSVAER 254
+ ++S++V +ISGETGCGKTTQV QF+L +HI G TC+IVCTQPRRISA SVAER
Sbjct: 132 LVKLINSSRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQPRRISAISVAER 191
Query: 255 ISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPA 311
++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 192 VAAERAESCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSD------------- 238
Query: 312 KDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGC 371
+S+++H+++DEIHER+ SD +++II+D+L L++ILMSATL+A++FS+YF C
Sbjct: 239 -KHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHC 297
Query: 372 PVIQVPGFTYPVKSFYLEDVLSILK 396
P+I +PGFT+PV + LEDV+ L+
Sbjct: 298 PMIHIPGFTFPVVEYLLEDVIEKLR 322
>gi|345324677|ref|XP_003430844.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Ornithorhynchus anatinus]
Length = 1100
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 228/413 (55%), Gaps = 43/413 (10%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
V E +I I+ L+ FL + F + ++ +R VH++ + G S+S G+G R +
Sbjct: 234 VDEEVKIAINVALERFLQGDQKEMEFPTSFTSSQRTFVHQLSRSFGFISRSKGKGASRFI 293
Query: 84 SVCKSKKRVETDKGKEILPSL---TFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKS 140
+V KK+ G E++P++ + S L ++ L +P N+ R
Sbjct: 294 TV---KKK----DGSELVPAVMTCNLTSSSTLTIKSLIQRFPV----------TNRERSD 336
Query: 141 DKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE---RSKLPISSFKDVI 197
+ +R +IF ++ E++ L S I + R+ E R LP+ + I
Sbjct: 337 LLPKSERGNIFAIETENR-EMSKTSGRLNSGIPQVPGKREQSEFDSFRYSLPVFEKQQEI 395
Query: 198 TSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISV 257
+ N+V LI GETG GKTTQ+PQFLL+ +++ C+I CTQPRR++A +VAER++
Sbjct: 396 IQMIRDNRVTLIVGETGSGKTTQIPQFLLDDSYTQKVPCRIFCTQPRRLTAIAVAERVAA 455
Query: 258 ERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA 317
ER E IG +GY+IRLES+ + + FCTNGVLLR L+S + +S
Sbjct: 456 ERREKIGQTVGYQIRLESRVSPKTLLTFCTNGVLLRTLMSGDTT-------------LST 502
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVP 377
+THIIVDE+HERDR+SDF+L ++++L +L+LIL SA LD + F +YFG CPV+ +P
Sbjct: 503 VTHIIVDEVHERDRFSDFLLIKLKEVLLKRTNLKLILSSAALDVNLFIKYFGSCPVLHIP 562
Query: 378 GFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAIS 430
G + VK F+LED+L S + ++ N++ + E+ ++ L E +S
Sbjct: 563 GKPFEVKEFFLEDILI------STGYKNKGMLNYNKEKQREEKQQAMLSEWLS 609
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 32/181 (17%)
Query: 404 DSASLIVPNEDPELTEENKSTLDEAISLAWSNDE---FDMLLELVSLEGSPNV-YNYQHT 459
DSA L +P L +E +D+ +S W N + FD + L+ E NV +Y+H+
Sbjct: 655 DSACL-----EPWLIKE----MDDCLSDIWLNKDRGAFDRVFHLILTE---NVSVDYRHS 702
Query: 460 LTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHM- 518
T +T LM+ AG+G + + L+ LGA+ KA +G A+ + E+ +++ +
Sbjct: 703 GTSVTALMIAAGRGFISQLEQLIRLGANIHNKAANGWMAIDWAKHFGHAEIVDVLESYSI 762
Query: 519 --------ENAL----SDSMK---QQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGA 563
E++L + +K + LL Y +V+ E +DL LI LL IC + A
Sbjct: 763 SLGFGNLDEHSLVLKNGNDLKLEARDLLKSYHHSVDDEKVDLDLIMHLLFNICRGDDTAA 822
Query: 564 I 564
Sbjct: 823 F 823
>gi|440635798|gb|ELR05717.1| hypothetical protein GMDG_07560 [Geomyces destructans 20631-21]
Length = 1490
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 235/482 (48%), Gaps = 52/482 (10%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
ID L+ QL+ KI D AILVFLPG +I + D LL P FR + + + PL
Sbjct: 950 IDFELVAQLIAKIATDERYVPFSKAILVFLPGIGEIRQLNDILLGLPTFR--TDWYVYPL 1007
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E +D +S
Sbjct: 1008 HSSIASEDQEAAFLVPPPGTRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQLS 1067
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIPIEELCLQV 717
L +++S+A+AKQR GRAGR Q G+C+HL+++ R L D Q PE+ R+ +++L ++V
Sbjct: 1068 RLLETFISRANAKQRRGRAGRVQEGLCFHLFTKYRHDELMSDQQTPELLRLSLQDLAIRV 1127
Query: 718 KLLDPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
K C IE+ L + LDPP + IR A+ L D+ AL+ E +T LG +L L +
Sbjct: 1128 K----TCKLGGIEETLGQALDPPSAKNIRRAVDALIDVRALTAAEGLTPLGIQLSRLPLD 1183
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ K++ + CLD +T+A + PF P ++ F G SD
Sbjct: 1184 VFLGKLILLGSIFKCLDATITVAAILSSKSPFQAPFGARQQADTVRLAFR-----RGDSD 1238
Query: 835 QLAVIAAFECWKNA-KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP---- 889
L A+ WK G E FC + F+S ++ + ++ QL L+ +GF+P
Sbjct: 1239 LLTNYNAYLAWKRVCNTTGSEYQFCRKNFLSPQTLSNIEDLKGQLTVSLVDSGFLPLTER 1298
Query: 890 -------EDVSSCSH-----------NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
SS H N+ I +V+ LYP + ++G+ F
Sbjct: 1299 ERAHIKRNRYSSRRHDFFELPQRANVNSENDLITQSVIAWALYPKLL-----VRDGKGFR 1353
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
A + LHP S+N K + + Y I + + T V + LL
Sbjct: 1354 NVANNQSISLHPTSVN-----KGHHEINWLSYYHIMQAKQFYNAHETTAVTDFAIALLCG 1408
Query: 992 EI 993
++
Sbjct: 1409 DV 1410
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 150/218 (68%), Gaps = 20/218 (9%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQ 242
+ R +LP+ +K+ + T+D QVV+I GETGCGK+TQVP F+LEH S+G+ CK+ CT+
Sbjct: 688 QSRMQLPMWGYKEEVLRTIDREQVVIICGETGCGKSTQVPAFILEHQLSQGKPCKLYCTE 747
Query: 243 PRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
PRRISA S+A+R+S E GE GD IGY IRLE+ + + +V+ T G+++R+L
Sbjct: 748 PRRISAISLAKRVSEELGERKGDVGTPRSLIGYAIRLETNTSRETRVVYATTGIVMRML- 806
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
E+SN D+ +THI++DE+HER SDF+L I+R ++ P L+++LMS
Sbjct: 807 --------ESSN-----DLKEITHIVLDEVHERTIDSDFLLIILRKLMARRPDLKVVLMS 853
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
AT+DA+RFS+Y G PV+QVPG T+PV S YLED + +
Sbjct: 854 ATVDAERFSKYLDGAPVLQVPGRTFPVTSCYLEDAVEL 891
>gi|157821633|ref|NP_001100654.1| ATP-dependent RNA helicase A [Rattus norvegicus]
gi|149058390|gb|EDM09547.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9 (predicted) [Rattus
norvegicus]
Length = 1174
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 627 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF-GSHRYQ 685
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 686 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 745
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 746 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 805
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 806 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 864
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 865 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 917
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC Q ++ + M + QL+ LI +GF PED
Sbjct: 918 HVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 976
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 977 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1031
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1032 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1076
Score = 203 bits (516), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/242 (43%), Positives = 159/242 (65%), Gaps = 20/242 (8%)
Query: 157 SKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +I+M +++ L ++E+D NL+ +++ER LP+ F+ I + N VV+I G TGC
Sbjct: 359 STEQISMDLKNELAYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGC 418
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQ++L+ + C IV TQPRRISA +VAER++ ERGE G + GY +R
Sbjct: 419 GKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRF 478
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + H+SI+FCT GVLLR L + + ++H+IVDEIHERD
Sbjct: 479 ESILPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDIN 522
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED +
Sbjct: 523 TDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI 582
Query: 393 SI 394
+
Sbjct: 583 QM 584
>gi|170084047|ref|XP_001873247.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650799|gb|EDR15039.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1453
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 235/448 (52%), Gaps = 46/448 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMD-----SEDGAILVFLPGWEDINKTRDRLLANPFFRD 589
L + LI LI LL KIC + S AIL+F+PG +I + + L +P F
Sbjct: 904 LNLFDERLIPYDLILCLLEKICFEDASYSSYSSAILIFMPGLGEIRRLHNMLAEHPAF-G 962
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
++ F + PLHS + + Q VF PP G RKI+++TNIAET ITI D+ VIDSG+ +E
Sbjct: 963 SNTFRLYPLHSTLSNENQGAVFDVPPAGVRKIVIATNIAETGITIPDITCVIDSGKHREM 1022
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRI 708
+D +S L +++++++A QR GRAGR Q G+C+HL++++R + D +PE+ R+
Sbjct: 1023 RFDEKRQISRLVETFIARSNAAQRRGRAGRVQRGLCFHLFTKIRHDTQMADSPLPEMMRL 1082
Query: 709 PIEELCLQVKLLDPN--CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766
+ +L L++K++ N +IED L + +DPPVS+ ++ A+ +L ++ AL+ E++T +G
Sbjct: 1083 SLSDLALRIKIIKVNLGTSIEDVLSRAMDPPVSINVQRAVSMLVEVRALTPTEEITPMGR 1142
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L + K L + L CLDPALT+A A + + PF P+ ++ F +
Sbjct: 1143 LLSKLPTDVHLGKFLLISTLFRCLDPALTIAAALNSKSPFVSPLGLEQEADRAKCSFRVE 1202
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQR-GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
+ SD LA+ AF W+ A FC ++S + + +R+Q LI +
Sbjct: 1203 N-----SDFLAIHNAFSSWRRASTNLASVRKFCRVNYLSHQNLQQIEELRQQFLGYLIDS 1257
Query: 886 GFI-------------------------PEDVSSCSHNARVPGIIHAVLMAGLYPMVARL 920
FI P ++ S S+NA ++H+ L AGLYP + +
Sbjct: 1258 NFIQVDKSFIGELNRIRYGRNRTRFVTVPPELDSNSNNA---FLVHSALTAGLYPKILTI 1314
Query: 921 RPPHKNGRRFVETAGGAKVRLHPHSLNF 948
P KNG T HP S+NF
Sbjct: 1315 DP--KNGEMRTVT-NNQHALFHPSSVNF 1339
Score = 196 bits (499), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
++++ +R+ LPI+ + I + ++QV+++SGETGCGK+TQVP F+LE S+G+ CKI
Sbjct: 626 QEMLTQRNMLPIAQHRAEILKILANSQVLVLSGETGCGKSTQVPSFILEDHLSRGKPCKI 685
Query: 239 VCTQPRRISATSVAERISVERGE------NIGDNIGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A+R+S E G+ +GY IRLES +++ + F TNG+ L
Sbjct: 686 YCTEPRRISAISLAQRVSRELGDPPNVVGTANSLVGYSIRLESNISRNTRLAFVTNGIAL 745
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L S K + +THIIVDE+HER SDF+L +++ +L P L++
Sbjct: 746 RMLEGGSGSGGKGTA-------FDEITHIIVDEVHERTIESDFLLIVLKSLLERKPDLKV 798
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
ILMSAT+DA++ S +FGGCP + VPG T+PV YLED + K
Sbjct: 799 ILMSATVDAEKISTFFGGCPTMHVPGRTFPVDIRYLEDAVEYTK 842
>gi|148707490|gb|EDL39437.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9, isoform CRA_b [Mus
musculus]
Length = 1384
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 627 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF-GSHRYQ 685
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 686 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 745
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 746 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 805
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 806 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 864
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 865 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 917
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC Q ++ + M + QL+ LI +GF PED
Sbjct: 918 HVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 976
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 977 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1031
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1032 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1076
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 161/242 (66%), Gaps = 20/242 (8%)
Query: 157 SKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +I+M +++ LT ++E+D NL+ +++ER LP+ F+ I + SN VV+I G TGC
Sbjct: 359 STEQISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGC 418
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQ++L+ + C IV TQPRRISA +VAER++ ERGE G + GY +R
Sbjct: 419 GKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRF 478
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + H+SI+FCT GVLLR L + + ++H+IVDEIHERD
Sbjct: 479 ESILPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDIN 522
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED +
Sbjct: 523 TDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI 582
Query: 393 SI 394
+
Sbjct: 583 QM 584
>gi|392579417|gb|EIW72544.1| hypothetical protein TREMEDRAFT_70747 [Tremella mesenterica DSM 1558]
Length = 1252
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 241/487 (49%), Gaps = 55/487 (11%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPF----FRDTSKFVIIPLHS 600
L+ + + S DG +LVFLPGW +I K D LL +N F D+SK+ I LHS
Sbjct: 619 LVALTIAYVMKRSADGHVLVFLPGWLEIKKVSDILLNGSNSLLGLRFSDSSKYSIHYLHS 678
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+P+ +QK+VF+ PP G R+IIL+TNIAET++TI DVVYV+D+ R+KEK YDP++++S+L
Sbjct: 679 SIPAAEQKEVFRPPPEGVRRIILATNIAETSVTIPDVVYVVDTARVKEKRYDPHSHMSSL 738
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
S+WV +++ QRAGRAGR + G + L S+ R SL Q+ E+KR + E+ + VK L
Sbjct: 739 VSAWVGQSNLNQRAGRAGRHREGEYFGLLSKARYESLETHQLVEMKRSDLSEVVMHVKAL 798
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
+ +E+ L ++PP I A+ L +GAL + +T LG L + + + K+
Sbjct: 799 NLG-EVEEVLAAAIEPPDPSRIVAAMQTLLMLGALDPQQNLTSLGRVLLHIPIEAAIGKL 857
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
L + CLD ALTLA RDPF P E+ A + + +SD +A++A
Sbjct: 858 LIYGSFFRCLDSALTLAAVLTNRDPFLSPPLMKEQADRIKASWSPKAF---RSDPIAILA 914
Query: 841 AFECWKNAKQRGQEAW-----FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC 895
A+ W +G+ W FCS F+S + + +R+ L L + G I
Sbjct: 915 AYSTWSEMDDKGE--WNRGSKFCSDNFLSKPTLLQIKQVRRSLLQSLQQAGVIAVSAGGT 972
Query: 896 ---------------SHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR 940
H+ R+P L+A L M + + + T V
Sbjct: 973 VRQMGRLREVPRRLNEHSDRLP------LLAALIAMASAPNFAIRTSEKMCRTEQDKAVM 1026
Query: 941 LHPHSLNFKLSFKKTDDC---------PLMVYDEITRGD--GG------MHVRNCTVVGP 983
+HP S+N K + + + E TR GG H+RN T + P
Sbjct: 1027 IHPSSVNSNRRDKADPNIGEASDRLERKIYAFSEKTRNVPLGGKAESATTHIRNVTRLDP 1086
Query: 984 LPLLLLA 990
+ LL
Sbjct: 1087 MTYLLFG 1093
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 148/232 (63%), Gaps = 16/232 (6%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE-- 234
+L ++ ++R LP++S I +TVDSN V ++ TG GKTTQ+PQ LL+ KG+
Sbjct: 347 SLGKMRQQRQSLPVTSKAADIIATVDSNDVTIVMAATGSGKTTQIPQLLLDDYIEKGKGA 406
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS-SIVFCTNGVLLR 293
C ++CTQPRR++A SVAERI+ ERG+ +G+ +GY++R +SK +H+ SI FCT G+ L+
Sbjct: 407 YCNVLCTQPRRLAAMSVAERIADERGDVLGNEVGYQVRFDSKPAQHNGSITFCTTGIFLK 466
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH---- 349
+ S L E ++ A + ++THI+VDE+HERD +D L +++ +L
Sbjct: 467 RMHSA----LGETADSGAIKQMDSITHIVVDEVHERDIDTDLSLVVLKRLLADRKARGKP 522
Query: 350 LRLILMSATLDADRFSQYFGG-----CPVIQVPGFTYPVKSFYLEDVLSILK 396
L++ILMSAT+D F YF PV ++PG T+PV+ FYL+ ++ +K
Sbjct: 523 LKVILMSATIDPTLFKTYFADERGRPAPVAEIPGRTFPVERFYLDKIVPDIK 574
>gi|150456419|ref|NP_031868.2| ATP-dependent RNA helicase A [Mus musculus]
Length = 1383
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 626 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF-GSHRYQ 684
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 685 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 744
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 745 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 804
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 805 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 863
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 864 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 916
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC Q ++ + M + QL+ LI +GF PED
Sbjct: 917 HVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 975
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 976 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1030
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1031 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1075
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 161/242 (66%), Gaps = 20/242 (8%)
Query: 157 SKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +I+M +++ LT ++E+D NL+ +++ER LP+ F+ I + SN VV+I G TGC
Sbjct: 358 STEQISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGC 417
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQ++L+ + C IV TQPRRISA +VAER++ ERGE G + GY +R
Sbjct: 418 GKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRF 477
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + H+SI+FCT GVLLR L + + ++H+IVDEIHERD
Sbjct: 478 ESILPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDIN 521
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED +
Sbjct: 522 TDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI 581
Query: 393 SI 394
+
Sbjct: 582 QM 583
>gi|402857890|ref|XP_003893470.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A,
partial [Papio anubis]
Length = 1202
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/468 (34%), Positives = 244/468 (52%), Gaps = 26/468 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 540 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 598
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 599 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 658
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 659 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 718
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 719 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 777
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 778 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 830
Query: 835 QLAVIAAFECWKNAKQR--GQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PE
Sbjct: 831 HVALLSVFQAWDDARYEMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PE 889
Query: 891 D-----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
D V + + ++ ++L G+YP V HK R+ + T G + +H S
Sbjct: 890 DCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSS 944
Query: 946 LNFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
+N S + P V+ E R + + T+V PL LLL A++
Sbjct: 945 VNCPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 991
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 275 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 334
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 335 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 394
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 395 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 438
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 439 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 497
>gi|353235847|emb|CCA67853.1| probable DNA/RNA helicase (DEAD/H box family II) [Piriformospora
indica DSM 11827]
Length = 1449
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/447 (32%), Positives = 231/447 (51%), Gaps = 43/447 (9%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE-----DGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
++ LI LI ++L ++C + + AILVF+PG +I K D LL++ F + +
Sbjct: 893 LDQRLIPYDLIVRMLERLCFEDDTYIAYSAAILVFMPGLAEIRKLHDMLLSHELFSNEA- 951
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
F I PLHS V S Q VF+ PP G RKI++S+NI+ET +TI D+ VIDSG+ ++ +D
Sbjct: 952 FRIYPLHSTVSSEGQSAVFEVPPAGIRKIVISSNISETGVTIPDITAVIDSGKHRQMMFD 1011
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIPIE 711
+S L ++++K++A QR GRAGR + GIC+HL+++LR +L + VPE+ R+ +
Sbjct: 1012 EKRQLSRLVETFIAKSNAAQRRGRAGRVREGICFHLFTRLRHDTLMAEHPVPEMLRLSLS 1071
Query: 712 ELCLQVKLL--DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
EL L+ K++ D +IE+ L++ LDPP + I+ A+ L + GAL+ E++T LG L
Sbjct: 1072 ELALRTKIMRVDVGSSIEEILRRALDPPSQINIQRAVASLVEAGALTPGEEITGLGRYLA 1131
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
+ + K L A + CLDPALT+A + PF P ++ A F +
Sbjct: 1132 HMPTDVALGKFLLMATVFKCLDPALTIAATLSSKSPFVSPFGKEDEANRQKAAFRV---- 1187
Query: 830 GGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
SD L + AF W++A GQ C + F+S + + +R+Q + L+
Sbjct: 1188 -DNSDFLTIHNAFATWRHACGNGQNFARDLCHKSFLSYQNLQQIEEIRQQYLSYLVDASL 1246
Query: 888 IPEDVSSCSHNARV-----------------------PG---IIHAVLMAGLYPMVARLR 921
I D + +RV PG I+A ++AGLYP + +
Sbjct: 1247 IKVDRAYEKELSRVRYSQGRGRPRFISVPPDTDVNSIPGKSAFINAAIVAGLYPKILVID 1306
Query: 922 PPHKNGRRFVETAGGAKVRLHPHSLNF 948
N ++ HP S+NF
Sbjct: 1307 GGSSN-QQMRALTNNQHAHFHPSSINF 1332
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 146/214 (68%), Gaps = 16/214 (7%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LPI++++ I T++ +QV+++SGETGCGK+TQ+P F++E S+G+ CKI+CT+PR
Sbjct: 622 RQTLPIAAYRQEIIETLEHHQVLVLSGETGCGKSTQLPAFIMEDQLSRGKACKIICTEPR 681
Query: 245 RISATSVAERISVERGE---NIGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E GE +G N IGY IRLES K + + F TNG+ LR+L
Sbjct: 682 RISAISLAQRVSAELGEPPGAVGTNHSLIGYSIRLESNITKSTRLAFVTNGIALRML--- 738
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
E N A + +TH+IVDE+HER SDF+L I++ +L P+LR++LMSAT
Sbjct: 739 ------EGGNG-AGATIDEVTHLIVDEVHERSIESDFLLIILKSLLEQRPNLRVVLMSAT 791
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
LDA + ++YFG CP I VPG T+PV +LED +
Sbjct: 792 LDAVKIAEYFGQCPTIYVPGRTFPVNVGFLEDAV 825
>gi|367041379|ref|XP_003651070.1| hypothetical protein THITE_2111015 [Thielavia terrestris NRRL 8126]
gi|346998331|gb|AEO64734.1| hypothetical protein THITE_2111015 [Thielavia terrestris NRRL 8126]
Length = 1501
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 242/492 (49%), Gaps = 56/492 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ I+ L+ +L+ KI +D E AILVFLPG +I D LL + FF D
Sbjct: 926 LAQMDEYRIEFDLVVELISKIAVDPEYEPYSKAILVFLPGIAEIRTLNDMLLGDRFFADN 985
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + +Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 986 --WLVYPLHSTIATEEQEAAFLIPPPGMRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1043
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIP 709
+D +S L S++S+A+AKQR GRAGR Q G+C+HL+++ R S+ D Q PE+ R+
Sbjct: 1044 FDERRQLSRLVDSFISRANAKQRRGRAGRVQEGLCFHLFTKYRYDTSMNDQQTPEMLRLS 1103
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS-LDEKVTELGEKL 768
+++L ++VK+ IE+ L++ LDPP IR AI L D+ AL+ E++T LG +L
Sbjct: 1104 LQDLAIRVKICKIG-GIEETLRQALDPPSPKNIRRAIDALVDVRALTATTEELTPLGVQL 1162
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L + + K++ + CLD A+T+A + PF P + + F
Sbjct: 1163 ARLPLDVFLGKLILLGTVFKCLDMAITVAAILSSKSPFVAPFGQRNQADSVRRGFR---- 1218
Query: 829 YGGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L V A+ WK Q G E FC + F+S + + ++ QL +
Sbjct: 1219 -KGDSDLLTVYNAYSAWKRVCQSATGGGAEFQFCRKNFLSQQTLANIEDLKGQLLIAVAD 1277
Query: 885 NGF---------------------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
+GF +P+ V S N V +V+ YP +
Sbjct: 1278 SGFLQLTADERQTLSRLRFSGRRRHQAFFEVPKRVDVNSDNELV---AQSVIAWSFYPKL 1334
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRN 977
+R P G R V T + LHP S+N K D + Y I + +
Sbjct: 1335 L-VRDPGSKGFRHVGT--NQSISLHPSSVN-----KGFTDLRWLSYYHIMQSKAFYNAHE 1386
Query: 978 CTVVGPLPLLLL 989
T P + LL
Sbjct: 1387 TTAADPFAIALL 1398
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 173/289 (59%), Gaps = 33/289 (11%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC 236
RQ++E R +LP+ F+ + V+ +QVV+I GETGCGK+TQVP FLLEH +G+ C
Sbjct: 670 KFRQMLESRMQLPMWQFRQQVVDAVERDQVVIICGETGCGKSTQVPAFLLEHQLLQGKPC 729
Query: 237 KIVCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGV 290
KI CT+PRRISA S+A R+S E GE GD +GY IRLES + + +V+ T G+
Sbjct: 730 KIYCTEPRRISAISLARRVSEELGEGKGDLGTSRSLVGYSIRLESNTARETRLVYATTGI 789
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
++R+L E SN D+ +TH+++DE+HER SDF+L +++ +L L
Sbjct: 790 VMRML---------EGSN-----DLEEITHLVLDEVHERSIDSDFLLVVLKKLLTRRKDL 835
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL-------KSAESNHL 403
+++LMSAT+DA RFS+Y G PV+ VPG T+PV+ YLED + + K + L
Sbjct: 836 KVVLMSATVDAQRFSEYLDGAPVLTVPGRTFPVRVAYLEDAVELTGYTVDQRKQEKLTEL 895
Query: 404 -DSASLIV-PNEDPELTEE----NKSTLDEAISLAWSNDEFDMLLELVS 446
D L V + PEL +E + T + + EFD+++EL+S
Sbjct: 896 DDDVELEVDTSSKPELLKELRQYSARTRNTLAQMDEYRIEFDLVVELIS 944
>gi|148707489|gb|EDL39436.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9, isoform CRA_a [Mus
musculus]
Length = 1174
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 627 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF-GSHRYQ 685
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 686 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 745
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 746 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 805
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 806 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 864
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 865 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 917
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC Q ++ + M + QL+ LI +GF PED
Sbjct: 918 HVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 976
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 977 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1031
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1032 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1076
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 161/242 (66%), Gaps = 20/242 (8%)
Query: 157 SKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +I+M +++ LT ++E+D NL+ +++ER LP+ F+ I + SN VV+I G TGC
Sbjct: 359 STEQISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGC 418
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQ++L+ + C IV TQPRRISA +VAER++ ERGE G + GY +R
Sbjct: 419 GKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRF 478
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + H+SI+FCT GVLLR L + + ++H+IVDEIHERD
Sbjct: 479 ESILPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDIN 522
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED +
Sbjct: 523 TDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI 582
Query: 393 SI 394
+
Sbjct: 583 QM 584
>gi|307197483|gb|EFN78717.1| Dosage compensation regulator [Harpegnathos saltator]
Length = 1243
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 241/464 (51%), Gaps = 20/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A + + I LIE LL+ I + GA+L+FLPGW I L +P F +S FV
Sbjct: 624 MAQLTEKEISFELIEILLKYIKAQNIPGAVLIFLPGWNLIFALMKHLQQHPLFGGSSYFV 683
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I PLHS +P Q+KVF P KIILSTNIAET+ITIDD+VYVIDS + K K + +
Sbjct: 684 I-PLHSQLPREDQRKVFDPVPSTVTKIILSTNIAETSITIDDIVYVIDSCKAKMKLFTSH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVKPGFCFHLCSKARYNKMDEHMTPEMFRTPLHELA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL NI FL K ++PP + A ++L+++ L ++++T LG+ L L +
Sbjct: 803 LSIKLLRLG-NIGRFLSKAIEPPPIDAVIEAEVMLREMKCLDNNDELTPLGKILARLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D T+A A+ P + P+ ++ K+ + Y SD
Sbjct: 862 PRLGKMMILGCMFRVGDSLSTMA-ANSTTFPEVYNMGPDVRRLTMQQKWFAGARY---SD 917
Query: 835 QLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A++ AF+ W+ + G+ E FC +S + + + QLQ L GF E +
Sbjct: 918 HVAMLHAFQAWEETRANGEYAEQIFCETKNLSLPTLRITWEAKNQLQALLQSAGFPEETL 977
Query: 893 SSCSHNARVPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+ N + I A+L GLYP V HK R+ + T A + +H S+N
Sbjct: 978 CATPLNYQAGSDVRLDTITALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVN 1032
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
++++ P V+ E R + + T+V P+ LLL +
Sbjct: 1033 CS-NYEQNFPFPFFVFGEKIRTR-AVSCKQMTMVSPIHLLLFGS 1074
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 156/228 (68%), Gaps = 19/228 (8%)
Query: 170 SRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
++++ D+NL+ ++ RS LP+SS K+ I + ++ N +V+I G TGCGKTTQV QF+L+
Sbjct: 367 TKLQDDSNLQARIKARSNLPVSSMKNEIMNAINENPIVIIRGNTGCGKTTQVCQFILDDY 426
Query: 230 W--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFC 286
S+G C IV TQPRRISA SVA+R++ ER E++G ++GY +R ES + ++SI+FC
Sbjct: 427 IASSQGAYCSIVVTQPRRISAVSVADRVAAERCESLGQSVGYSVRFESCLPRPYASIMFC 486
Query: 287 TNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS 346
T GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+
Sbjct: 487 TVGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHM 530
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
YP LRLILMSAT+D FS YF CPVI++PG YPVK ++LED + +
Sbjct: 531 YPDLRLILMSATIDTTLFSDYFNKCPVIEIPGRAYPVKQYFLEDCIEL 578
>gi|242032961|ref|XP_002463875.1| hypothetical protein SORBIDRAFT_01g008080 [Sorghum bicolor]
gi|241917729|gb|EER90873.1| hypothetical protein SORBIDRAFT_01g008080 [Sorghum bicolor]
Length = 1148
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 257/502 (51%), Gaps = 62/502 (12%)
Query: 496 RTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKI 555
+T QL ++ + ++ ++++ ++N+ ++ + D L NP+ I LIE +L I
Sbjct: 500 KTQRQLLPRKRKNQITTLVEEALKNSSFETYGSRTRDS-LVNWNPDCIGFNLIEAVLCHI 558
Query: 556 CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
C GA+LVF+ GW+DI +D+L A+P D ++ +++ H + + +Q+ +F++PP
Sbjct: 559 CRKERPGAVLVFMTGWDDITCLKDQLKAHPLLGDPNRVLLLACHGSMATSEQRLIFEKPP 618
Query: 616 PGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAG 675
P RK++L+TN+AE +ITI+D+V+V+D G+ KE +YD NN L SW+SKASA+Q
Sbjct: 619 PNVRKVVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISKASARQ--- 675
Query: 676 RAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLD 735
IK LQV +I +FL L
Sbjct: 676 -----------------------------IK-------SLQVG------SIGEFLSAALQ 693
Query: 736 PPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALT 795
PP + + NA+ L+ IGAL +E +T+LG L L V P + KML + C+DP LT
Sbjct: 694 PPEPLAVENAVEFLKMIGALDGNENLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILT 753
Query: 796 LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA 855
+ RDPF LP +K A AK ++ SD +A++ A+E WK+A++ G
Sbjct: 754 VVAGLSVRDPFLLP--QEKKDLAGTAKSRFSA--KDYSDHMALVRAYEGWKDAEREGSAY 809
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED---VSSCSHNARVPGIIHAVLMAG 912
+C + F+SS + + +RKQ L +G I D +S SHN ++ ++ +G
Sbjct: 810 EYCWRNFLSSQTLQAIHSLRKQFSYILKDSGLIDSDGNTNNSLSHNQ---SLVRGIICSG 866
Query: 913 LYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
L+P +A + H+ +T +V L+ +S+N K +T P +V+ E + +
Sbjct: 867 LFPGIASV--VHRENSMSFKTMDDGQVLLYVNSVNAKY---QTIPYPWLVFGEKVKVN-A 920
Query: 973 MHVRNCTVVGPLPLLLLATEIA 994
+ +R+ T V ++L +
Sbjct: 921 VFIRDSTGVSDSIVILFGGAVT 942
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 160/229 (69%), Gaps = 18/229 (7%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETCK 237
+++E R LP K+ + + + NQV++ISGETGCGKTTQ+PQF+LE I S +G C
Sbjct: 277 KMLEFRRSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCN 336
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I+CTQPRRISA +VAER+S ERGEN+G+++GYK+RLE GK + ++FCT+G+LLR L+S
Sbjct: 337 IICTQPRRISAMAVAERVSTERGENLGESVGYKVRLEGIKGKDTHLLFCTSGILLRRLLS 396
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+++ +TH+ VDEIHER DF+L +++++L LRLILMSA
Sbjct: 397 D--------------RNLNGVTHVFVDEIHERGMNEDFLLIVLKELLSRRRDLRLILMSA 442
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--SILKSAESNHLD 404
TL+A+ FS YFGG P I +PGFT+PV++ +LED+L S K SN LD
Sbjct: 443 TLNAELFSSYFGGAPTIHIPGFTHPVRAHFLEDILERSGYKLTSSNQLD 491
>gi|336365386|gb|EGN93737.1| hypothetical protein SERLA73DRAFT_115779 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1302
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 230/423 (54%), Gaps = 25/423 (5%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF---FRDTSKFVIIPLHSMVP 603
LI + + ++ G +LVFLPGWE+I + LL+ F D+SK+ + LHS +P
Sbjct: 634 LIALAISHVLQKTDSGHVLVFLPGWEEITAVQRILLSGRMDLNFSDSSKYGLHLLHSTIP 693
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+Q+ +F+ PP G R+IIL+TNIAET+ITI DVVYVIDSG++KE+ Y+P ++++L S+
Sbjct: 694 LAEQQVIFEPPPEGVRRIILATNIAETSITIPDVVYVIDSGKVKEQRYNPDKHMTSLVSA 753
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD-P 722
WV ++ QRAGRAGR ++G + + + AA L Q E+KR+ + + + VK L+ P
Sbjct: 754 WVGSSNLNQRAGRAGRHRSGEYFGILGKAHAAGLHPHQTVEMKRVDLTNVVMHVKALNFP 813
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ED L T++PP S + A+ LQ +GAL + +T LG L L V M +++
Sbjct: 814 GMEVEDVLAATIEPPESERVAAAMKDLQMVGALDGKKNLTPLGRVLLQLPVDVQMGRLVL 873
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ CLD ALTLA RDPF P+ +E+ A++ A +SD L ++ A+
Sbjct: 874 YGSFFRCLDQALTLAAILTNRDPFVSPVHLHEEAAKAKARWLPADF---RSDALTILQAY 930
Query: 843 ECWKNAKQRGQ---EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS--- 896
W + +G+ FCS+ F+S + ++ +R L + + G I DVS+
Sbjct: 931 NTWWAMQSKGEYNSANRFCSENFLSKPTLLLISKIRGHLLQSMYQAGVI--DVSAGGSVT 988
Query: 897 -----HNARVPGIIHA-----VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
VP ++A L+A L + ++ + + G R TA +HP S+
Sbjct: 989 APTRRREPAVPPELNANGESLPLLAALIAVASQPKFAIRQGERSYRTAQDKTTFIHPSSV 1048
Query: 947 NFK 949
N +
Sbjct: 1049 NHR 1051
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 153/274 (55%), Gaps = 26/274 (9%)
Query: 161 IAMKVESLTSRIEK---DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
+A+K L R +K D + + R LPI + + S + N+V + TG GK
Sbjct: 337 LALKSTQLLERRQKYLSDPAMENLRNTRMSLPIYTRSKELLSHIQDNEVTICMAATGSGK 396
Query: 218 TTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGD-NIGYKIRLE 274
TTQ+PQ +L+ + G C I+CTQPRR++A SVA+R++ ERGE +G +IGY +R E
Sbjct: 397 TTQIPQLILDDYIDREQGARCNIICTQPRRLAALSVADRVAKERGEVVGKGSIGYSVRFE 456
Query: 275 SK-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
SK +H + FCT GVLL+ L S L E AK D +THI+VDE+HERD +
Sbjct: 457 SKVPEEHGCVTFCTTGVLLKRLQSA----LTEGGLAAAKMD--EVTHIVVDEVHERDVDT 510
Query: 334 DFMLAIIRDMLPSYPH----LRLILMSATLDADRFSQYF---GGCP--VIQVPGFTYPVK 384
D +L +++ ML L+++LMSAT+D F +YF G P VI+VPG +PV
Sbjct: 511 DLLLVVLKQMLEDRKSRNVPLKIVLMSATIDPSLFQKYFPTEQGNPADVIEVPGRLFPVT 570
Query: 385 SFYLEDVLSILKSAESN----HLDSASLIVPNED 414
+LED + +KS H DS + NED
Sbjct: 571 KHFLEDFIPSMKSNPRTGWVFHEDSVVKYLRNED 604
>gi|347440664|emb|CCD33585.1| similar to ATP-dependent RNA helicase A [Botryotinia fuckeliana]
Length = 1385
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 225/425 (52%), Gaps = 40/425 (9%)
Query: 543 IDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ LI Q +++I + +DG IL+F+PG +I +T D L P +PL
Sbjct: 853 INYDLISQTVKEIDAELTHLKQDGGILIFMPGLVEITRTLDYLKTIPNLH------ALPL 906
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + S Q+KVF P G RK+I++TN+AET+ITIDD+V VID+GR+KE SYDP NN+
Sbjct: 907 HASLQSSDQRKVFPHAPYGKRKVIVATNVAETSITIDDIVAVIDTGRVKETSYDPQNNMR 966
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQV 717
L+ W S+A+ KQR GRAGR QAG CY LY++ + + + PEI+R+P+E+LCL V
Sbjct: 967 KLEEVWASRAACKQRRGRAGRVQAGKCYKLYTRNAETSKMMERPEPEIRRVPLEQLCLSV 1026
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
+ + + FL + PP S+ + A+ +L +GAL D+ +T LG L +
Sbjct: 1027 RAMGIK-EVGSFLASAITPPESIAVDGAMDLLGRMGALDGDD-LTALGRHLSMIPADLRC 1084
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ + + CLD A+T+A + PF P E+ ++ AKF Q D +
Sbjct: 1085 GKLMVYGAMFGCLDAAVTIAAILTVKSPFVSPQDKREESKSARAKFA-----KNQGDLIG 1139
Query: 838 VIAAFECW------KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
+ AFE W +N +Q W CS F+S +N + R Q T L + GFIP
Sbjct: 1140 DLRAFEEWYEMINNRNYRQGEIRNW-CSDNFLSYQTLNDISSNRTQYLTSLREIGFIPSS 1198
Query: 892 -------VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPH 944
+ S+NA +I ++ P +AR+ P K +F + GA V L P
Sbjct: 1199 SILPPALSAKSSNNA----LIRSLCAGAFNPQLARIDFPDK---KFAASVSGA-VELDPE 1250
Query: 945 SLNFK 949
+ K
Sbjct: 1251 AKTIK 1255
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 157/260 (60%), Gaps = 19/260 (7%)
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDS 203
R +R +I P+ K +K + + + L +++ R LP KD+I TV+S
Sbjct: 568 RRRRQNISRHPRAIKWITNIKSKDEWKSRQLNPKLESMIKGRRTLPAWEMKDIIVDTVNS 627
Query: 204 NQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGE 261
+QV +ISGETG GK+TQ QF+L+ ++ + G+ KI+CTQPRRISA +A+R+S ER
Sbjct: 628 HQVTIISGETGSGKSTQSAQFILDDMYQRAFGDCAKIICTQPRRISALGLADRVSDERCS 687
Query: 262 NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA---- 317
+G +GY IR ESK ++ I F T GVLLR L + G S DDV A
Sbjct: 688 AVGQEVGYIIRGESKASPNTKITFVTTGVLLRRLQTSGGS----------SDDVVASLAD 737
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF---GGCPVI 374
++H+I+DE+HER +DF+L ++RD+L L+LILMSATLDA F YF G +
Sbjct: 738 VSHVIIDEVHERSLDTDFLLVLLRDVLRQRKDLKLILMSATLDAGIFEDYFKSGGKVGRV 797
Query: 375 QVPGFTYPVKSFYLEDVLSI 394
++ G TYPV+ +YL+DV+ +
Sbjct: 798 EISGRTYPVEDYYLDDVIRM 817
>gi|156059440|ref|XP_001595643.1| hypothetical protein SS1G_03732 [Sclerotinia sclerotiorum 1980]
gi|154701519|gb|EDO01258.1| hypothetical protein SS1G_03732 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1442
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 158/487 (32%), Positives = 243/487 (49%), Gaps = 46/487 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
+A + I+ L+ QL+ KI D AILVFLPG +I D L +P F +
Sbjct: 901 IAQFDEYRIEFDLVTQLIAKIASDDRLVMYSKAILVFLPGIAEIRTLNDMLCGHPAF--S 958
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
S + I PLHS + S Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 959 SDWYIYPLHSTIASEDQEAAFLVPPPGIRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1018
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIP 709
+D +S L +++SKA+AKQR GRAGR Q G+C+HL+++ R + D Q PE R+
Sbjct: 1019 FDERRQLSRLLETFISKANAKQRRGRAGRVQEGLCFHLFTKYRHDEVMADQQTPEFLRLS 1078
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L + LDPP + IR AI L D+ AL+ E +T LG +L
Sbjct: 1079 LQDLAIRVKICKLG-GIEETLSEALDPPSAKNIRRAIDALVDVRALTAGEDLTPLGVQLA 1137
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD +T+A + PF+ P +R A LA
Sbjct: 1138 RLPLDVFLGKLMLLGSVFKCLDAVVTIAAILSSKSPFSAPFG----QRQQADTVRLA-FR 1192
Query: 830 GGQSDQLAVIAAFECWKNA-KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
G SD L V A+ WK G E FC + F+S ++ + ++ QL L+ +GF+
Sbjct: 1193 RGDSDLLTVYNAYLAWKKVCIANGSEYQFCRKNFLSQQTLSNIEDLKGQLVVCLVDSGFL 1252
Query: 889 P------EDVSSCSHNAR------VPG----------IIHAVLMAGLYPMVARLRPPHKN 926
P ++ +++R +P I+ +V+ YP + ++
Sbjct: 1253 PLTEAERTALNRTRYSSRRRQFFEIPFRINANSDNDIIVSSVIGWSFYPKLL-----IRD 1307
Query: 927 GRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPL 986
G+ F A + LHP S+N K + + Y I + + T V +
Sbjct: 1308 GKGFRNCANNQSISLHPTSVN-----KGHHELKWLSYYHIMQAKQFYNAHETTAVEEFSI 1362
Query: 987 LLLATEI 993
LL ++
Sbjct: 1363 ALLCGDV 1369
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 179/291 (61%), Gaps = 38/291 (13%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ +++ R +LP+ SFKD + +D +QVV++ GETGCGK+TQVP F+LEH S+G+ CKI
Sbjct: 644 QHMLQSRMQLPMWSFKDEVLGAIDRSQVVIVCGETGCGKSTQVPAFILEHQLSRGQPCKI 703
Query: 239 VCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A R+S E GE D +GY IRLES K + +++ T G+++
Sbjct: 704 YCTEPRRISAISLARRVSEELGERKSDLGTPRSLVGYAIRLESNTSKETRLIYATTGIVM 763
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L E SN D+ +THI++DE+HER SDF+L ++R +L P L++
Sbjct: 764 RML---------EGSN-----DLRDITHIVLDEVHERTIDSDFLLIVLRKLLVRRPDLKV 809
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
+LMSAT+DADRFS+Y G PV+ VPG T+PV+ YLED + + + N L + +
Sbjct: 810 VLMSATVDADRFSKYLDGAPVLNVPGRTFPVQVKYLEDAVELTGFSLDNGLQEKYTDL-D 868
Query: 413 EDPELTE--ENKSTLDEAISL--AWSND-------------EFDMLLELVS 446
+D EL + N++T +E+ +SN EFD++ +L++
Sbjct: 869 DDVELADVNSNETTKNESTKALRGYSNKTRNTIAQFDEYRIEFDLVTQLIA 919
>gi|350402053|ref|XP_003486351.1| PREDICTED: dosage compensation regulator-like [Bombus impatiens]
Length = 1234
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 243/464 (52%), Gaps = 20/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + I LIE LL I S GAIL+FLPGW I L +P + +S ++
Sbjct: 620 MAQLNEKEISFELIEALLGYIKKQSISGAILIFLPGWNLIFALMKHLQQHPVYGGSS-YM 678
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS +P Q KVF+ P KIIL+TNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 679 IIPLHSQLPREDQHKVFEPVMPEVTKIILATNIAETSITINDVVYVIDSCKAKMKLFTSH 738
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL
Sbjct: 739 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARYNKMDEHMTPEMFRTPLHELA 798
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL K ++PP + A ++L+++ L + ++T LG+ L L +
Sbjct: 799 LSIKLLRLG-SIGKFLSKAIEPPPIDAVIEAEVILREMKCLDENNELTPLGKILARLPIE 857
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + C+ AL+ A+ + P+ ++ + K + Y SD
Sbjct: 858 PRLGKMMILGCIF-CVGDALSTMAANSTTFLEVYNMGPDLRRLSAQQKSFAGARY---SD 913
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A++ AF+ W+ A+ G +E FC +S + + + QLQ L+ GF + +
Sbjct: 914 HVAMLHAFQAWEEARSMGEYEEQTFCDSKNLSMPTLRVTWEAKNQLQALLLSAGFPEKTL 973
Query: 893 SSCSHNARVPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
S N I A+L GLYP V HK R+ + T A + +H S+N
Sbjct: 974 SPTPLNYHAGADTRLDTITALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVN 1028
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
+F++ PL V+ E R + + T+V P+ LLL +
Sbjct: 1029 CS-NFEQNFPFPLFVFGEKIRTR-AVSCKQMTMVSPIHLLLFGS 1070
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 155/227 (68%), Gaps = 19/227 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R+++D L++ ++ERS LP+ S K+ I + ++ N +++I G TGCGKTTQV QF+L+
Sbjct: 364 RLQEDERLQKSIKERSHLPVFSMKNEIMNAINENPIIIIRGNTGCGKTTQVCQFILDDYI 423
Query: 231 SKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+ G+ C I TQPRRISA SVA+R+++ER E++G ++GY +R ES + + SI+FCT
Sbjct: 424 ASGQGACCSIAITQPRRISAVSVADRVALERCEDLGLSVGYSVRFESYLPRPYGSIMFCT 483
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+ Y
Sbjct: 484 VGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHMY 527
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
P LR+ILMSAT+D FS YF CPVI++PG +YPV+ ++LED + +
Sbjct: 528 PDLRIILMSATIDTTLFSNYFNNCPVIEIPGRSYPVQQYFLEDCIQL 574
>gi|310799154|gb|EFQ34047.1| helicase associated domain-containing protein [Glomerella graminicola
M1.001]
Length = 1490
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 246/501 (49%), Gaps = 62/501 (12%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANP-FFRD 589
LA ++ ID LI QL+ KI DSE AILVFLPG +I D L +P F RD
Sbjct: 928 LAQMDEYRIDFDLIVQLIAKIASDSEYVAYSKAILVFLPGIAEIRTLNDLLSGDPSFARD 987
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
++I PLHS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 988 ---WLIYPLHSTIATEDQEAAFLVPPPGMRKIVLATNIAETGITIPDVTCVIDTGKHREM 1044
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRI 708
+D +S L +++S+A+AKQR GRAGR Q G+C+HL+++ R + + D Q PE+ R+
Sbjct: 1045 RFDERRQLSRLIDTFISRANAKQRRGRAGRVQDGLCFHLFTKHRHDTIMSDQQTPEMLRL 1104
Query: 709 PIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
+++L ++VK+ IE+ L + LDPP + IR A+ L D+ AL+ E +T LG +L
Sbjct: 1105 SLQDLAIRVKICKIG-GIEETLSEALDPPSAKNIRRAVDALIDVRALTPAEDLTPLGNQL 1163
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L + + K++ + CLD A+T+A + PFT P +RA A
Sbjct: 1164 ARLPLDVFLGKLILMGAIFKCLDMAITVAAILSSKSPFTAPFG----QRAQ-ADLVRKGF 1218
Query: 829 YGGQSDQLAVIAAFECWKNAKQR-----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
G SD L V A+ WK Q G++ FC + F+S + + ++ QL +
Sbjct: 1219 RRGDSDLLTVYNAYLSWKRVCQSTSASGGKDFQFCRKNFLSQQTLANIEDLKGQLLVSVA 1278
Query: 884 KNGF------------------------------IPEDVSSCSHNARVPGIIHAVLMAGL 913
+GF IP+ VS S N I AV+
Sbjct: 1279 DSGFLLLTDDERRALNRLRYGANSRGRRHQNFFDIPQRVSINSEN---DAITTAVVAWSF 1335
Query: 914 YPMVARLRPPHKNGRRFVETAGGAK-VRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
YP +L G R + G + + LHP S+N K ++ + Y I +
Sbjct: 1336 YP---KLLVRDNLGSRGLRNVGNNQSISLHPSSVN-----KGHNELKWLSYYHIMQSKSV 1387
Query: 973 MHVRNCTVVGPLPLLLLATEI 993
H + P + LL ++
Sbjct: 1388 YHAHETSAADPFAIALLCGDV 1408
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 148/218 (67%), Gaps = 20/218 (9%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+++ R +LP+ +FK +T VD QVV++ GETGCGK+TQVP FLLEH ++G+ CKI C
Sbjct: 676 MLQGRMQLPMWNFKQQVTDAVDREQVVIVCGETGCGKSTQVPAFLLEHQLTQGKPCKIYC 735
Query: 241 TQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A R+S E GE GD +GY IRLE+ + + +VF T G+++R+
Sbjct: 736 TEPRRISAISLARRVSEELGEGRGDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVMRM 795
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L E SN D+ +TH+++DE+HER SDF+L I++ ++ L+++L
Sbjct: 796 L---------EGSN-----DLREVTHLVLDEVHERSIDSDFLLIILKKLMLRRKDLKVVL 841
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
MSAT+DA+RFS+Y GG PV+ VPG T+PV+ YLED +
Sbjct: 842 MSATVDAERFSKYLGGAPVLTVPGRTFPVQVRYLEDAI 879
>gi|336377946|gb|EGO19106.1| hypothetical protein SERLADRAFT_418699 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1469
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 230/423 (54%), Gaps = 25/423 (5%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF---FRDTSKFVIIPLHSMVP 603
LI + + ++ G +LVFLPGWE+I + LL+ F D+SK+ + LHS +P
Sbjct: 703 LIALAISHVLQKTDSGHVLVFLPGWEEITAVQRILLSGRMDLNFSDSSKYGLHLLHSTIP 762
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
+Q+ +F+ PP G R+IIL+TNIAET+ITI DVVYVIDSG++KE+ Y+P ++++L S+
Sbjct: 763 LAEQQVIFEPPPEGVRRIILATNIAETSITIPDVVYVIDSGKVKEQRYNPDKHMTSLVSA 822
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD-P 722
WV ++ QRAGRAGR ++G + + + AA L Q E+KR+ + + + VK L+ P
Sbjct: 823 WVGSSNLNQRAGRAGRHRSGEYFGILGKAHAAGLHPHQTVEMKRVDLTNVVMHVKALNFP 882
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ED L T++PP S + A+ LQ +GAL + +T LG L L V M +++
Sbjct: 883 GMEVEDVLAATIEPPESERVAAAMKDLQMVGALDGKKNLTPLGRVLLQLPVDVQMGRLVL 942
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ CLD ALTLA RDPF P+ +E+ A++ A +SD L ++ A+
Sbjct: 943 YGSFFRCLDQALTLAAILTNRDPFVSPVHLHEEAAKAKARWLPADF---RSDALTILQAY 999
Query: 843 ECWKNAKQRGQ---EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS--- 896
W + +G+ FCS+ F+S + ++ +R L + + G I DVS+
Sbjct: 1000 NTWWAMQSKGEYNSANRFCSENFLSKPTLLLISKIRGHLLQSMYQAGVI--DVSAGGSVT 1057
Query: 897 -----HNARVPGIIHA-----VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
VP ++A L+A L + ++ + + G R TA +HP S+
Sbjct: 1058 APTRRREPAVPPELNANGESLPLLAALIAVASQPKFAIRQGERSYRTAQDKTTFIHPSSV 1117
Query: 947 NFK 949
N +
Sbjct: 1118 NHR 1120
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 153/274 (55%), Gaps = 26/274 (9%)
Query: 161 IAMKVESLTSRIEK---DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGK 217
+A+K L R +K D + + R LPI + + S + N+V + TG GK
Sbjct: 406 LALKSTQLLERRQKYLSDPAMENLRNTRMSLPIYTRSKELLSHIQDNEVTICMAATGSGK 465
Query: 218 TTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGENIGD-NIGYKIRLE 274
TTQ+PQ +L+ + G C I+CTQPRR++A SVA+R++ ERGE +G +IGY +R E
Sbjct: 466 TTQIPQLILDDYIDREQGARCNIICTQPRRLAALSVADRVAKERGEVVGKGSIGYSVRFE 525
Query: 275 SK-GGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
SK +H + FCT GVLL+ L S L E AK D +THI+VDE+HERD +
Sbjct: 526 SKVPEEHGCVTFCTTGVLLKRLQSA----LTEGGLAAAKMD--EVTHIVVDEVHERDVDT 579
Query: 334 DFMLAIIRDMLPSYPH----LRLILMSATLDADRFSQYF---GGCP--VIQVPGFTYPVK 384
D +L +++ ML L+++LMSAT+D F +YF G P VI+VPG +PV
Sbjct: 580 DLLLVVLKQMLEDRKSRNVPLKIVLMSATIDPSLFQKYFPTEQGNPADVIEVPGRLFPVT 639
Query: 385 SFYLEDVLSILKSAESN----HLDSASLIVPNED 414
+LED + +KS H DS + NED
Sbjct: 640 KHFLEDFIPSMKSNPRTGWVFHEDSVVKYLRNED 673
>gi|148226408|ref|NP_001087383.1| ATP-dependent RNA helicase A-like protein [Xenopus laevis]
gi|71153340|sp|Q68FK8.1|DHX9_XENLA RecName: Full=ATP-dependent RNA helicase A-like protein; AltName:
Full=DEAH box protein 9; AltName: Full=Nuclear DNA
helicase II; Short=NDH II
gi|51262114|gb|AAH79701.1| MGC81010 protein [Xenopus laevis]
Length = 1262
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 157/455 (34%), Positives = 238/455 (52%), Gaps = 22/455 (4%)
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPS 604
L LIE LL+ I + GA+LVFLPGW I + L NP F S + I+PLHS +P
Sbjct: 636 LELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHS-YCILPLHSQIPR 694
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +NN++ + W
Sbjct: 695 DEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVW 754
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
SK + +QR GRAGR + G C+HL S+ R L PEI R P+ E+ L +KLL
Sbjct: 755 ASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLG- 813
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I FL K ++PP + A L+++ AL ++++T LG L L + P + KM+
Sbjct: 814 GIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIG 873
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+ D T++ A+ + +PF +E +R A SD +A+++ F+
Sbjct: 874 CIFYVGDALCTISAATCFPEPFI-----SEGRRLGYVHRNFAG--NRFSDHVALLSVFQA 926
Query: 845 WKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP 902
W +A+ G++A FC ++ + M + QL+ L+ GF E + + N P
Sbjct: 927 WDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNAGFPEECLMNQVFNNTGP 986
Query: 903 ----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD-D 957
++ ++L G+YP V HK R+ + T G + +H S+N S +
Sbjct: 987 DNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNCPFSNQDLKYP 1041
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
P V+ E R + + T+V PL LLL A++
Sbjct: 1042 SPFFVFSEKIRTR-AISAKGMTMVSPLQLLLFASK 1075
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 153/224 (68%), Gaps = 19/224 (8%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL-EHIWS- 231
+D N++Q++ +R LP+ F++ I V ++ VV+I G TGCGKTTQVPQ++L E+I +
Sbjct: 376 QDPNIKQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRND 435
Query: 232 KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGV 290
+ C IV TQPRRISA SVAER++ ERGE IG + GY +R ES + H+S++FCT GV
Sbjct: 436 RAAQCNIVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGV 495
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
LLR L S + ++H+IVDEIHERD +DF+L ++RD++ ++P +
Sbjct: 496 LLRKLES----------------GIRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEI 539
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
R+ILMSAT+D F +YF CP+I+V G T+PV+ +YLED + +
Sbjct: 540 RVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYLEDCIQM 583
>gi|154298471|ref|XP_001549658.1| hypothetical protein BC1G_11420 [Botryotinia fuckeliana B05.10]
Length = 1601
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 225/425 (52%), Gaps = 40/425 (9%)
Query: 543 IDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ LI Q +++I + +DG IL+F+PG +I +T D L P +PL
Sbjct: 853 INYDLISQTVKEIDAELTHLKQDGGILIFMPGLVEITRTLDYLKTIPNLH------ALPL 906
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + S Q+KVF P G RK+I++TN+AET+ITIDD+V VID+GR+KE SYDP NN+
Sbjct: 907 HASLQSSDQRKVFPHAPYGKRKVIVATNVAETSITIDDIVAVIDTGRVKETSYDPQNNMR 966
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQV 717
L+ W S+A+ KQR GRAGR QAG CY LY++ + + + PEI+R+P+E+LCL V
Sbjct: 967 KLEEVWASRAACKQRRGRAGRVQAGKCYKLYTRNAETSKMMERPEPEIRRVPLEQLCLSV 1026
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
+ + + FL + PP S+ + A+ +L +GAL D+ +T LG L +
Sbjct: 1027 RAMGIK-EVGSFLASAITPPESIAVDGAMDLLGRMGALDGDD-LTALGRHLSMIPADLRC 1084
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ + + CLD A+T+A + PF P E+ ++ AKF Q D +
Sbjct: 1085 GKLMVYGAMFGCLDAAVTIAAILTVKSPFVSPQDKREESKSARAKFA-----KNQGDLIG 1139
Query: 838 VIAAFECW------KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
+ AFE W +N +Q W CS F+S +N + R Q T L + GFIP
Sbjct: 1140 DLRAFEEWYEMINNRNYRQGEIRNW-CSDNFLSYQTLNDISSNRTQYLTSLREIGFIPSS 1198
Query: 892 -------VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPH 944
+ S+NA +I ++ P +AR+ P K +F + GA V L P
Sbjct: 1199 SILPPALSAKSSNNA----LIRSLCAGAFNPQLARIDFPDK---KFAASVSGA-VELDPE 1250
Query: 945 SLNFK 949
+ K
Sbjct: 1251 AKTIK 1255
Score = 180 bits (456), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 157/260 (60%), Gaps = 19/260 (7%)
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDS 203
R +R +I P+ K +K + + + L +++ R LP KD+I TV+S
Sbjct: 568 RRRRQNISRHPRAIKWITNIKSKDEWKSRQLNPKLESMIKGRRTLPAWEMKDIIVDTVNS 627
Query: 204 NQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISATSVAERISVERGE 261
+QV +ISGETG GK+TQ QF+L+ ++ + G+ KI+CTQPRRISA +A+R+S ER
Sbjct: 628 HQVTIISGETGSGKSTQSAQFILDDMYQRAFGDCAKIICTQPRRISALGLADRVSDERCS 687
Query: 262 NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA---- 317
+G +GY IR ESK ++ I F T GVLLR L + G S DDV A
Sbjct: 688 AVGQEVGYIIRGESKASPNTKITFVTTGVLLRRLQTSGGS----------SDDVVASLAD 737
Query: 318 LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF---GGCPVI 374
++H+I+DE+HER +DF+L ++RD+L L+LILMSATLDA F YF G +
Sbjct: 738 VSHVIIDEVHERSLDTDFLLVLLRDVLRQRKDLKLILMSATLDAGIFEDYFKSGGKVGRV 797
Query: 375 QVPGFTYPVKSFYLEDVLSI 394
++ G TYPV+ +YL+DV+ +
Sbjct: 798 EISGRTYPVEDYYLDDVIRM 817
>gi|307176984|gb|EFN66290.1| Dosage compensation regulator [Camponotus floridanus]
Length = 1243
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 159/464 (34%), Positives = 240/464 (51%), Gaps = 20/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A + + I LIE LL I + GA+L+FLPGW I L + F +S ++
Sbjct: 622 MAQLTEKEISFELIEALLIYIKRQNIPGAVLIFLPGWNLIFALMKHLQQHSVFGGSS-YL 680
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS +P Q+KVF P KIILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 681 IIPLHSQLPREDQRKVFDPVPSSVTKIILSTNIAETSITINDVVYVIDSCKAKMKLFTSH 740
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL
Sbjct: 741 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFNKMDEHMTPEMFRTPLHELA 800
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL NI FL K ++PP + A +VL+++ L ++++T LG+ L L +
Sbjct: 801 LSIKLLRLG-NIGQFLSKAIEPPPIDAVIEAEVVLREMKCLDKNDELTPLGKILARLPIE 859
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D AL+ A+ P + P+ ++ T K+ + Y SD
Sbjct: 860 PRLGKMMILGCMFRVGD-ALSTMAANSTTFPEVYNMGPDVRRLTTQQKWFAGARY---SD 915
Query: 835 QLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+ AF+ W+ A+ G+ E FC +S + + + QLQ L GF E +
Sbjct: 916 HVAMFHAFQAWEEARTGGEWAEQAFCESKNLSMPTLRITWEAKNQLQALLQSAGFPEETL 975
Query: 893 SSCSHNARVPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
N + I A+L GLYP V HK R+ + T A + +H S+N
Sbjct: 976 CPTPLNYQAVSDPRLDTITALLCMGLYPNVCF----HKEKRKVLTTESKAAL-IHKTSVN 1030
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
+F++ P V+ E R + + T+V P+ LLL +
Sbjct: 1031 CS-NFEQNFPFPFFVFGEKIRTR-AVSCKQMTMVSPIHLLLFGS 1072
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 178/287 (62%), Gaps = 27/287 (9%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
++++D++L+ ++ERS LP+ + ++ I + ++ N +++I G TGCGKTTQV QF+L+
Sbjct: 365 KLQQDSSLQASIKERSNLPVFAKRNEIMNAINENPIIIIRGNTGCGKTTQVCQFILDDYI 424
Query: 231 SKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+ G+ C IV TQPRRISA SVA+R++VER E++G +IGY +R ES + ++S++FCT
Sbjct: 425 ASGQGAYCSIVVTQPRRISAVSVADRVAVERCESLGQSIGYSVRFESFLPRPYASVMFCT 484
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+ Y
Sbjct: 485 VGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHLY 528
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK------SAESN 401
P LR+ILMSAT+D FS+YF CPV++VPG YPV+ ++LED + + K S +
Sbjct: 529 PDLRIILMSATIDTTLFSEYFNNCPVVEVPGRAYPVQQYFLEDCIELTKFVPPTASGKRK 588
Query: 402 HLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLE 448
DS L P D E E +D S+ N + + +S E
Sbjct: 589 SRDSDDL--PTADGEPEENLNKVIDNDYSIETKNAMAQLTEKEISFE 633
>gi|395334189|gb|EJF66565.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1468
Score = 236 bits (603), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 239/463 (51%), Gaps = 47/463 (10%)
Query: 523 SDSMKQQLLDKYLATVN---PELIDLVLIEQLLRKICMD-----SEDGAILVFLPGWEDI 574
S +++++ + ++TVN LI LI +LL ++C + S AIL+F+PG +I
Sbjct: 890 SVTLEKRYSPETISTVNLLDERLIPYDLIIRLLERVCFEDSSYASYSSAILIFMPGMGEI 949
Query: 575 NKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITI 634
+ D L+ + F +F I PLHS + S QQ VF PPPG RKI+++TNIAET ITI
Sbjct: 950 RRLNDMLMEHRVFSAEDQFRIYPLHSTISSEQQGAVFDIPPPGVRKIVIATNIAETGITI 1009
Query: 635 DDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR- 693
D+ VID+G+ +E +D +S L ++++K++A QR GRAGR Q+G+C+HL+++ R
Sbjct: 1010 PDITCVIDTGKHREMRFDEKRQISRLVETFIAKSNAAQRRGRAGRVQSGLCFHLFTKARH 1069
Query: 694 ---AASLPDFQVPEIKRIPIEELCLQVKLLDPN--CNIEDFLQKTLDPPVSVTIRNAIIV 748
A PD PEI R+ + +L L++K++ N +IED L + LDPP+ + ++ A+
Sbjct: 1070 DTKMAGHPD---PEIMRLSLSDLALRIKIMKVNLGTSIEDVLSRALDPPLGINVQRAVSA 1126
Query: 749 LQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTL 808
L ++ AL+ E++T +G L L + K L A L CLDPALT+A + + PF
Sbjct: 1127 LVEVRALTATEEITPMGRLLSQLPTDVHLGKFLLIATLFRCLDPALTIAATLNSKSPFLT 1186
Query: 809 PISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVM 868
P+ A A + +L S SD L + AF W+ A G FC ++S +
Sbjct: 1187 PLG----LEAEAERAKL-SFRTENSDFLTLHNAFASWRRASGNGIARKFCKTNYLSHQNL 1241
Query: 869 NMLLGMRKQLQTELIKNGFIPEDVSSCSHNARV---PGIIHAVLM--------------- 910
+ +R Q + L+ + FI D + +R G V++
Sbjct: 1242 QQIEELRTQFLSYLVDSSFIHVDRAFIKELSRARYNRGKTRFVMVPPDLDVNSGNAAIVH 1301
Query: 911 ----AGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
AGLYP + + P R + HP S+NF+
Sbjct: 1302 AALAAGLYPKILAVDPSKGEMRTITNNQPAS---FHPSSVNFR 1341
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 147/220 (66%), Gaps = 13/220 (5%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
++++++R++LP++ +K + S ++ +Q++++SGETGCGK+TQVP F+LE KG C+I
Sbjct: 630 QEMLKQRNQLPMAHYKQDLLSLLEMSQILVLSGETGCGKSTQVPAFILEDQLLKGRHCRI 689
Query: 239 VCTQPRRISATSVAERISVERGENIG------DNIGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A+R+S E GE G +GY IRLES + + + + TNG+ L
Sbjct: 690 YCTEPRRISAISLAQRVSRELGEPAGAVGTGNSLVGYAIRLESNINRRTRLAYVTNGIAL 749
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L + + +THII+DE+HER SDF+L +++ +L P L++
Sbjct: 750 RMLEGGSGQGGQGTA-------FDEITHIIIDEVHERTIESDFLLIVLKSLLLQRPDLKI 802
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ILMSATL+A++ S YFGGCPV+ VPG T+PV +LED +
Sbjct: 803 ILMSATLEAEKISAYFGGCPVLSVPGRTFPVDVRFLEDAV 842
>gi|224010695|ref|XP_002294305.1| hypothetical protein THAPSDRAFT_12570 [Thalassiosira pseudonana
CCMP1335]
gi|220970322|gb|EED88660.1| hypothetical protein THAPSDRAFT_12570 [Thalassiosira pseudonana
CCMP1335]
Length = 801
Score = 236 bits (603), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 243/490 (49%), Gaps = 41/490 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSED--------------GAILVFLPGWEDINKTRDRLLA 583
VN E+I+ LIE +L + + E+ G+ILVFLPG +I +RL
Sbjct: 280 VNEEVINCDLIEDVLLLLLIRPENNNTLVAPDGADLSTGSILVFLPGLGEIKAMAERLEG 339
Query: 584 NPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDS 643
N FRD S+F IIP+HS + S Q++ F GCRKIILSTNI ET++T+ VV V+D+
Sbjct: 340 NRHFRDASRFEIIPMHSTLSSRDQRRAFIPAKTGCRKIILSTNICETSVTVPSVVCVLDT 399
Query: 644 GRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVP 703
G+++E + S L + W SKASAKQRAGRAGR Q+G+C LYS A + +P
Sbjct: 400 GKVREVRQNKRTLTSVLATDWCSKASAKQRAGRAGRVQSGLCLKLYSSHTAKVMKAASLP 459
Query: 704 EIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE---- 759
E++R+P+EE+CL + + FL + +PP +IR AI VL D+GA+ E
Sbjct: 460 ELQRVPLEEICLSILASGFAKSCLSFLSQAPEPPSEQSIRAAIDVLHDVGAIERSEEKGT 519
Query: 760 ----KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEK 815
++T LG+ L L V + KML F+ L C+DP LT+ + PF+ ++
Sbjct: 520 TQHDQLTPLGQHLAKLPVDCRLGKMLIFSTLFQCVDPVLTITACLSSQSPFSTFVND--- 576
Query: 816 KRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLG 873
A AK + S SD + +E + A + A FC ++S + +
Sbjct: 577 --AAVAKAKQQSFADPDSDFMTYCNLWEAYSKALEESHSAVRQFCRDNYLSQAALREISD 634
Query: 874 MRKQLQTELIKNGFIPEDV-------SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKN 926
R+Q L GF+ + V S + +AR ++++V+ AGL P VA L +
Sbjct: 635 ARRQFLGLLQSIGFLGDLVKGEKLKTSVFNKHARKQELVNSVICAGLIPNVAHLE--QRQ 692
Query: 927 GRRFVETAGGAKVRLHPHSLNF-KLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLP 985
++ ++ H S+N K F +++ +V+ E + V P
Sbjct: 693 MAEYIMWHNTERLYFHKASVNASKKRFSSSEN--WVVFHEKFGTSNRTTISTTCFVHPFA 750
Query: 986 LLLLATEIAV 995
LLL + V
Sbjct: 751 LLLFGGHVVV 760
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 150/224 (66%), Gaps = 17/224 (7%)
Query: 172 IEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW- 230
I K + +++ R LP+SS++ + TV N V ++ ETG GKTTQ PQ++LE
Sbjct: 2 IRKTTSYQRMKAARDSLPMSSYRQTVLDTVRDNPVTILCAETGAGKTTQAPQYILEEALL 61
Query: 231 -SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNG 289
G+ +I+CTQPRR++ATSVAER+S E + +G +GY+IR+E+K H+ ++FCT G
Sbjct: 62 DGHGDKVQILCTQPRRVAATSVAERVSEEMCDTLGQVVGYQIRMEAKRSSHTKLLFCTTG 121
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML-PSYP 348
++LR RL+E S D+S +TH++VDE+HER + +D +L I+R +L + P
Sbjct: 122 IVLR--------RLQEDS------DLSGITHVLVDEVHERQQQTDVLLVILRQLLETTRP 167
Query: 349 HLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
L++ILMSAT+D+D F +F G P+I VPG T+PV ++YLED+L
Sbjct: 168 DLKVILMSATMDSDLFCSFFHGAPLISVPGRTFPVNNYYLEDLL 211
>gi|357618484|gb|EHJ71445.1| MLE protein [Danaus plexippus]
Length = 804
Score = 236 bits (603), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 153/455 (33%), Positives = 241/455 (52%), Gaps = 26/455 (5%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
LIE +L I +GA+L+FLPGW I L+ N F D K +I+PLHS +P +
Sbjct: 170 LIEAILTYISSQDVEGAVLIFLPGWNLIFALMKHLMKNSVFGDPQKCLILPLHSQIPREE 229
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q+KVF PPPG K+I+STNIAET+ITI+DVVYVIDS + K K + +NN+++ + W S
Sbjct: 230 QRKVFVAPPPGVMKVIVSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWAS 289
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
+++ +QR+GRAGR +AG+C+ L S+ R + L Q E+ R P+ EL L +KLL NI
Sbjct: 290 RSNIEQRSGRAGRVRAGVCFTLCSKRRFSRLDQHQTAEMFRTPLHELALSIKLLRLG-NI 348
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL K +PP + A +L+++G L + +T LG L L + P + KM+ +
Sbjct: 349 GHFLSKAPEPPPLDAVIEAEALLRELGCLDSKDNITPLGTILAKLPIEPRLGKMMVLGFV 408
Query: 787 MDCLDPALTLAC-ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW 845
+ D T+A ++ + + F + ++R + + LA SD +A++ AF+ W
Sbjct: 409 LGVGDALTTMAANSTTFPEIFVV----EGRRRLSGQQRALAGHR--SSDHIAMLNAFQMW 462
Query: 846 KNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG 903
+ + +G++A +C + + + + QL L + PE+ C +P
Sbjct: 463 EGERSKGEDAEIAWCEWKGLQQTTLRVTCEAKYQLINILTTSIGFPEEC--CLPRRWLPN 520
Query: 904 I-------IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD 956
+ + A+L GLYP V G+R V T G +H S+N + ++
Sbjct: 521 VSDPELDLVIALLCMGLYPNVCL-----HQGKRKVLTTEGKPALIHKTSVNCS-NQEQCF 574
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
PL V+ E R + + T+V PL LLL A+
Sbjct: 575 QSPLFVFGEKVRTR-AISCKQTTMVAPLHLLLFAS 608
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 77/117 (65%), Gaps = 16/117 (13%)
Query: 280 HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAI 339
+ SI+FCT GVLLR L + + ++H++VDE+HERD +DF L +
Sbjct: 5 YGSILFCTVGVLLRRL----------------EGGLRGVSHVLVDEVHERDAETDFALIL 48
Query: 340 IRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+RDM +YP LR+ILMSAT+D F +YFG CPVI+VPG +YPVK ++LED + + K
Sbjct: 49 LRDMAHTYPDLRVILMSATVDTSLFVEYFGNCPVIEVPGRSYPVKQYFLEDCIELTK 105
>gi|414587184|tpg|DAA37755.1| TPA: hypothetical protein ZEAMMB73_165571 [Zea mays]
Length = 1185
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 200/324 (61%), Gaps = 13/324 (4%)
Query: 532 DKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
++ L +N ++ID L+E L+ I + GAILVFLPG +I+ DRL A F S
Sbjct: 847 NQNLKRLNEDVIDFDLLEDLICYIDENCPQGAILVFLPGVAEIDLLIDRLSALVRFGGAS 906
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
I+PLHS++ Q+KVF+ PP RK+I++T+IAET+ITIDDVVYV+D+G+ KE Y
Sbjct: 907 SDWILPLHSLLGPSDQRKVFQSPPDNFRKVIIATDIAETSITIDDVVYVVDTGKHKENRY 966
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPI 710
+P+ +S++ W+S+A+AKQR GRAGR + G+C+ LY++ R + + FQVPE+ R+P+
Sbjct: 967 NPHKKMSSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFENVMRPFQVPEMLRMPL 1026
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
ELCLQ+K L + +I+ FL K ++PP I +A+ +L +GA E+++ LG L
Sbjct: 1027 TELCLQIKSLHLD-DIKSFLLKAVEPPNEEAISSAVDLLYKVGAFEGHEELSPLGYHLAK 1085
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL--ASL 828
L V L+ KM+ + + CL P L++A Y+ PF P +EK+ AK L +L
Sbjct: 1086 LPVDVLIGKMMLYGAIFGCLSPILSVAAFLSYKSPFLSP--KDEKQNVEKAKATLLNENL 1143
Query: 829 YGG-------QSDQLAVIAAFECW 845
G QSD L ++ A++ W
Sbjct: 1144 DGSSSVTDNKQSDHLLMVIAYDKW 1167
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 166/271 (61%), Gaps = 26/271 (9%)
Query: 132 LDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPIS 191
+D+ + S KR +AE A+ + L + K N +++E R+ LPI+
Sbjct: 517 MDSGNTEGSKSVNEKRQTTMTSCMAERAESAILKKQLEDK-RKLPNYLKMLEARASLPIA 575
Query: 192 SFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCTQPRRISAT 249
+ + N VV++SGETGCGKTTQVPQF+L+ + G +C IVCTQPRRI+A
Sbjct: 576 RQRQHFLQLLKENDVVVVSGETGCGKTTQVPQFILDDMIESELGGSCNIVCTQPRRIAAI 635
Query: 250 SVAERISVERGE-NIGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKE 305
SVAER+S ER E + G N +GY++RL+S + + ++FCT G+LLR L
Sbjct: 636 SVAERVSDERCEPSPGSNDSLVGYQVRLDSARNERTKLLFCTTGILLRKL---------- 685
Query: 306 ASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-----LRLILMSATLD 360
+ N+ D+S +TH++VDE+HER SDF+L ++++++ + L++ILMSAT+D
Sbjct: 686 SGNR----DLSDVTHVVVDEVHERTILSDFLLIVLKNLVEKRSNQQGRKLKVILMSATVD 741
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+ F++YFG CPVI V G T+PV + +LEDV
Sbjct: 742 SSLFARYFGECPVISVEGRTHPVSTHFLEDV 772
>gi|430811488|emb|CCJ31057.1| unnamed protein product [Pneumocystis jirovecii]
gi|430813418|emb|CCJ29239.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1363
Score = 236 bits (602), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 146/433 (33%), Positives = 234/433 (54%), Gaps = 30/433 (6%)
Query: 535 LATVNPELIDLV--LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL---ANPFFRD 589
L ++N + I++ LI + I S DG+ILVFLPG+ +I+ L+ A F D
Sbjct: 806 LLSINEKEINISDGLIATTISYIIKTSNDGSILVFLPGYSEISSLNKVLISGKAGVDFTD 865
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
SK+ I LHS +P +Q VF++ PG RKIIL+TNIAET+ITI DVVYV+D+ + +EK
Sbjct: 866 KSKYRIYMLHSAIPYMQND-VFEKLEPGIRKIILATNIAETSITIPDVVYVVDTCKHREK 924
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
YD +++L S+W+S++++KQRAGRAGR + G Y L S+ R ++L +PEI R
Sbjct: 925 IYDQTKRITSLLSTWISQSNSKQRAGRAGRVRNGYYYALISKNRHSALAAASLPEILRSD 984
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
++E+CLQ+K + +I L +T++ P + + L + AL +E +T LG L
Sbjct: 985 LQEICLQIKAIGVKDSISKILSETIEVPSKEAVEYGLKRLHSLNALDENENLTPLGNVLA 1044
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V P + KM + CLDP L LA ++ R+ F PI ++ R A+ L+ Y
Sbjct: 1045 TLPVEPSLGKMCLMGAIFKCLDPILILAASTTVRNVFLQPIELQKESR--EARIRLSMDY 1102
Query: 830 GGQSDQLAVIAAFECW---KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
+SD + +I F W +N + + F + F+ + + + +Q+ LI
Sbjct: 1103 --KSDHITIINCFRKWRLIRNTEGNASASIFIERNFLHRNTLQTIENIAEQILQILIDYK 1160
Query: 887 FIPE-----------DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAG 935
+P D S ++ +P +I +++ AG YP +A + +R + T+
Sbjct: 1161 IVPNIKNEKLSHELGDEESNKYSDCIP-LIKSLICAGFYPNIAAI-----TNKRLLRTSN 1214
Query: 936 GAKVRLHPHSLNF 948
+ V LHP ++NF
Sbjct: 1215 DSLVMLHPTTINF 1227
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 148/243 (60%), Gaps = 26/243 (10%)
Query: 172 IEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--I 229
+K+ +L+ + ++R +LPI +KD + + + N V ++ G TG GKTTQ+PQF+ E +
Sbjct: 516 FKKNESLKDLFKKRQELPIYQYKDELLTLIKENPVCIVIGATGSGKTTQLPQFIFEDAIL 575
Query: 230 WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTN 288
+ G C I+CTQPRRI+A SVA+R+ ER E + +++GY++R +SK K SI +CT
Sbjct: 576 NNSGARCNILCTQPRRIAAISVAQRVCFERNEKLRESVGYQVRFDSKPAKPIGSINYCTT 635
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS-- 346
G+LL+ L S L+ ++HIIVDE+HER+ DF+L I++ ++
Sbjct: 636 GILLKQLQDSSSSILE------------GISHIIVDEVHERNIQIDFLLVILKRIIKERK 683
Query: 347 ---YPHLRLILMSATLDADRFSQYFGG------CPVIQVPGFTYPVKSFYLEDVLSILKS 397
P ++++LMSAT++ F +YFG P I +PG ++PV S++LE++ LK+
Sbjct: 684 SLGLPPIKIVLMSATINPTLFCKYFGDEFPNGQAPSITIPGRSFPVSSYFLEEIYENLKN 743
Query: 398 AES 400
S
Sbjct: 744 TFS 746
>gi|346972076|gb|EGY15528.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
[Verticillium dahliae VdLs.17]
Length = 1487
Score = 236 bits (602), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 159/498 (31%), Positives = 241/498 (48%), Gaps = 57/498 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ ID LI QL+ KI D AILVFLPG +I D LL +P F
Sbjct: 926 LAQMDEYRIDFDLIVQLIAKIAADPSYSQFSKAILVFLPGIAEIRTINDMLLGDPSF--A 983
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++I PLHS + + Q+ F PPPG RK++L+TNIAET ITI DV VID+G+ +E
Sbjct: 984 KDWLIYPLHSSIATEDQEAAFLVPPPGIRKVVLATNIAETGITIPDVTCVIDTGKHREMR 1043
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H+++ R A L D Q PE+ R+
Sbjct: 1044 FDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTNHRHDALLSDQQTPEMLRLS 1103
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L + LD P + IR A+ L D+ AL+ E++T LG +L
Sbjct: 1104 LQDLAIRVKICKIG-GIEETLSEALDAPSAKNIRRAVDALIDVRALTNAEELTPLGHQLA 1162
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD A+T+A + PF+ P +RA A +
Sbjct: 1163 RLPLDVFLGKLILLGTVFKCLDMAITVAAILSSKSPFSAPFG----QRAQADMVRMG-FR 1217
Query: 830 GGQSDQLAVIAAFECWKNAKQR-----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L + A+ W+ Q G+E FC + F+S + + ++ QL L+
Sbjct: 1218 RGDSDLLTIYNAYLAWRRVCQTTSASGGKEFQFCRKNFLSQQTLANIEDLKGQLMVSLVD 1277
Query: 885 NGF-----------------------------IPEDVSSCSHNARVPGIIHAVLMAGLYP 915
+GF IP+ V+ S N I AV+ YP
Sbjct: 1278 SGFLSLTDDERRALNRLRYSNNSRRRHQQFFEIPQRVNLNSEN---DAITTAVIAWSFYP 1334
Query: 916 MVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
+ P G R V + LHP S+N K ++ + Y I + H
Sbjct: 1335 KLLVRDTPGSRGLRNV--GNNQSISLHPSSVN-----KGHNEIRWLSYYHIMQSKAVYHA 1387
Query: 976 RNCTVVGPLPLLLLATEI 993
+ + LL ++
Sbjct: 1388 HETSAADAFAIALLCGDV 1405
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 177/304 (58%), Gaps = 33/304 (10%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+++ R +LP+ F+ + TVD QVV+I GETGCGK+TQVP FLLEH ++G+ CKI C
Sbjct: 675 MLQSRMQLPMWQFRQQVVDTVDREQVVIICGETGCGKSTQVPSFLLEHQLAQGKPCKIYC 734
Query: 241 TQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A R+S E GE GD +GY IRLE+ K + +VF T G+++R+
Sbjct: 735 TEPRRISAISLARRVSEELGEGRGDIGTPRSLVGYSIRLEANTSKETRLVFATTGIVMRM 794
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L E SN D+ +TH+++DE+HER SDF+L +++ ++ L+++L
Sbjct: 795 L---------EGSN-----DLREVTHLVLDEVHERSIDSDFLLIVLKKLMLRRKDLKVVL 840
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI--LKSAESNHLDSASL---- 408
MSAT+DA+RFS Y G PV+ VPG T+PV+ YLED + + + ++N L
Sbjct: 841 MSATVDAERFSNYLGNAPVLTVPGRTFPVQVRYLEDAIELTGFSTGQANQEKMVDLDDDV 900
Query: 409 IVPNEDP------ELTEENKSTLDEAISLAWSNDEFDMLLELVS-LEGSPNVYNYQHTLT 461
E P ELT+ + T + + +FD++++L++ + P+ + +
Sbjct: 901 ETETEGPKTTVGSELTKYSAKTRNTLAQMDEYRIDFDLIVQLIAKIAADPSYSQFSKAIL 960
Query: 462 GLTP 465
P
Sbjct: 961 VFLP 964
>gi|395334327|gb|EJF66703.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1278
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 223/443 (50%), Gaps = 37/443 (8%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL----ANPF---FRDTSKFVIIPLH 599
LI + + S+DG +LVFLPGW+DI+ R LL + P F DTSKF I LH
Sbjct: 631 LIALTIAHVLKKSQDGHVLVFLPGWDDISAVRRFLLEGDRSKPLGFNFGDTSKFSIHLLH 690
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
S +P +Q+ +F PPPG R+IILSTNIAET++TI DVVYV+D+ R+KE+ YDP ++S
Sbjct: 691 STIPVAEQQAIFDPPPPGVRRIILSTNIAETSVTIPDVVYVVDTARIKEQRYDPARHISN 750
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L S+WV ++ QRAGRAGR + G + + S+ A L Q E+KR+ +E + + VK
Sbjct: 751 LVSAWVGTSNLNQRAGRAGRHRPGEYFGILSRRHAEELHPHQTVEMKRVDLENVVMHVKA 810
Query: 720 LD-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
L+ P IE+ L T++PP I AI L +GAL D +T LG L L V P +
Sbjct: 811 LNFPGMTIEEVLAATIEPPAPERIEAAIKSLHMVGALDADNNLTSLGSVLLQLPVDPRLG 870
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
+++ F CLD ALT+A R+PF PI ++ +A + +SD LA
Sbjct: 871 RLVLFGSFFRCLDSALTIAALMGSREPFVAPIHIKQEAQAKKNSWTPDEF---RSDILAA 927
Query: 839 IAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG--------- 886
+ A+ W + + FCS F+S + + ++ L L G
Sbjct: 928 LRAYNEWWALQSQNLYVSANRFCSDNFLSKPTLLNVAKVKDHLLKALYDVGVVDVSGGGR 987
Query: 887 --FIPEDVSSCSHNARVPGIIHAV--------LMAGLYPMVARLRPPHKNGRRFVETAGG 936
++P S VP + + L+A L + + + + G R TA
Sbjct: 988 LPYVPPGARSRD----VPPVPSQLNENGDSLPLLAALIAIACQPKFAIRTGERIYRTAVD 1043
Query: 937 AKVRLHPHSLNFKLSFKKTDDCP 959
V +HP S+N + D P
Sbjct: 1044 KAVIIHPSSVNHRRREMPKDGTP 1066
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 155/264 (58%), Gaps = 24/264 (9%)
Query: 151 FCKPKMSKAEIAMKVESLTSRIEK---DANLRQIVEERSKLPISSFKDVITSTVDSNQVV 207
+ +P S A +A K L SR E + L I R+ LP+ + + + V+ + V
Sbjct: 317 YRRPPASAAYLAEKSARLRSRREAYLTNPALESIRNTRATLPVFTKSEELLKHVNEHDVT 376
Query: 208 LISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGD 265
+ TG GKTTQ+PQ +L+ +GE C I+CTQPRRI+A SVAER++ ERGE G
Sbjct: 377 ICMAATGSGKTTQIPQLILDEWIERGEGAKCNIICTQPRRIAAISVAERVAKERGETCGR 436
Query: 266 N--IGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
+ +GY++R ESK + H SI +CT GV LR + + L E S++ + DDV THII
Sbjct: 437 DGTVGYQVRFESKLPEDHGSITYCTTGVFLRKMQTA----LMETSSRRSMDDV---THII 489
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSY----PHLRLILMSATLDADRFSQYF---GGCP--V 373
VDE+HERD D ML +++ +L ++++LMSAT+DA F +YF G P V
Sbjct: 490 VDEVHERDVDIDLMLVVLKRLLAERRAQKKPVKIVLMSATIDATLFRKYFPDEQGQPAGV 549
Query: 374 IQVPGFTYPVKSFYLEDVLSILKS 397
+++PG +PV+ +L+D + L S
Sbjct: 550 VEIPGRAHPVQKHFLDDFVPELAS 573
>gi|410923737|ref|XP_003975338.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like [Takifugu
rubripes]
Length = 1052
Score = 236 bits (601), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 217/414 (52%), Gaps = 37/414 (8%)
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
+HS + Q+ VF+RP G RKI+L+TNIAET++TIDD+V+V+D+G KE++YDP V
Sbjct: 566 MHSSLSVADQQAVFQRPQVGQRKIVLTTNIAETSVTIDDIVHVVDTGTHKEQNYDPLTKV 625
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
S L + W+S ++ QR GRAGRCQ G YHL+ Q + S+ F VPEI R P+E L +Q
Sbjct: 626 SCLDTVWISHSNVTQRKGRAGRCQPGQSYHLFPQKKLESMSQFPVPEILRTPLESLVVQA 685
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+ PN DFL + LD P ++ A+ LQDIG L E +T LGE++ C+ P +
Sbjct: 686 KIHSPNLKAVDFLSQVLDSPDREAVKAAVQNLQDIGVLDKTETLTPLGERVACMPCDPRL 745
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K+L + + C+ P + +A A RDPF S + AK EL+ SD L
Sbjct: 746 GKVLVLSAMFRCVLPMMCVA-ACLTRDPFH--NSLQNRAEINKAKAELSD--SSYSDYLV 800
Query: 838 VIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE---- 890
I A W+ + G A + + +S + + G+ Q T L + +P
Sbjct: 801 FIRAVLGWRRLQHAGDGEDRAEYLDRLSLSRFSLRFIKGLISQFSTNLYEAELVPHANAC 860
Query: 891 --DVSSCSHNARVPGIIHAVLMAGLYPMV-----------ARLRPPHKNGRRFVETAGGA 937
D S C+ + ++ AVL+AGLYP + R RP GR + T G
Sbjct: 861 QRDASLCNERSNEEELLKAVLLAGLYPNLIQVKKGVVTKGGRFRP----GRTSLRTFSGP 916
Query: 938 KVRLHPHSLNFKLSFKKTDDCP--LMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
V+LH S+N + ++ P + + + +G + VR+ + V PL LLLL
Sbjct: 917 -VQLHRSSVN-----RGKEEFPSRWLTFFTAVKSNGIVFVRDSSTVHPLALLLL 964
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 142/212 (66%), Gaps = 20/212 (9%)
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW---SKGETCKIVCTQP 243
+LP+ + + + S V+S++VV+I+GETGCGKTT++P+FLLE W KG C ++ TQP
Sbjct: 354 ELPVDAHRQRVVSAVESSRVVVIAGETGCGKTTRIPRFLLEE-WVRGGKGAECNVLVTQP 412
Query: 244 RRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS--SIVFCTNGVLLRLLVSQGVS 301
RRISA SVA R++ E G + ++GY++RLES+ S +++F T GVLLR L S
Sbjct: 413 RRISAVSVAHRVAQEMGPALKHSVGYQVRLESRPPDQSGGALLFLTVGVLLRKLQSN--- 469
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
+ ++H++VDE+HERD +D +LA++R L P LR++LMSAT D
Sbjct: 470 -----------PSLKGISHVVVDEVHERDINTDLLLALLRSSLEENPDLRVVLMSATGDK 518
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
R +QYFGGCPVI+VPGF +PV YLEDVL+
Sbjct: 519 QRLAQYFGGCPVIKVPGFMHPVXDLYLEDVLT 550
>gi|321478026|gb|EFX88984.1| hypothetical protein DAPPUDRAFT_41608 [Daphnia pulex]
Length = 562
Score = 236 bits (601), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 201/343 (58%), Gaps = 9/343 (2%)
Query: 536 ATVNPELIDLVLIEQLLRKICMDS-EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
T+ P ++D L+ +L+R I ++ G+ILVFLPGW DI +L F+
Sbjct: 222 VTLKP-MVDQDLLVKLVRHIDLNKPSQGSILVFLPGWADIKNLHSKL---KFYPSEETHW 277
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+P+HS + +Q+++F RPP G RKI+L+TNIAET++TI D VYVID G KE Y+
Sbjct: 278 ILPVHSRLSQTEQERIFDRPPEGVRKIVLATNIAETSLTIPDCVYVIDPGVHKELRYNSQ 337
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
+ +++ WVSKA+ +QRAGRAGR Q G +HLYSQ + + F EI RIP+E++
Sbjct: 338 RGTAVMENQWVSKANVQQRAGRAGRVQPGESFHLYSQEKFEEMEPFPQAEILRIPLEKVV 397
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
+ +K D N DFL +TL+PP +I +AI LQ IGAL E++T LG ++ S H
Sbjct: 398 MDIKAYDENLKSVDFLSRTLEPPTHRSIYDAIQELQSIGALDEYERLTPLGRRIAQFSTH 457
Query: 775 PLMSKMLFFAILMDCLDP-ALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
P ++K L FA L CLDP A +A S R+ +++ S EK+R + + + + S
Sbjct: 458 PRLAKSLVFATLFRCLDPVASIVAGLSSAREGWSVE-STVEKQRQVIRQAK--NRFHSTS 514
Query: 834 DQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRK 876
D LA+ + ++N + R + FC Q+ + + L G+ K
Sbjct: 515 DHLALANLVKQFRNQRGRYEVDEFCDQFRANPKSLYFLRGITK 557
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 151/234 (64%), Gaps = 19/234 (8%)
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVCTQPRR 245
LPI+ +D I ++ N+VV++SG+TGCGK+TQ+PQ+LL+ + +G C I+ TQPRR
Sbjct: 14 LPIAEKRDEILDLIEKNRVVVLSGDTGCGKSTQMPQYLLDSYALKHRGTDCNIIVTQPRR 73
Query: 246 ISATSVAERISVERGENIGDNIGYKIRLES--KGGKHSSIVFCTNGVLLRLLVSQGVSRL 303
++A S+A+ ++ RGE +GD++GY++RL S + I+FC+ G+LLR RL
Sbjct: 74 LAALSLAQTVAGHRGEKVGDSVGYQVRLNSVLPSQQQGRILFCSTGILLR--------RL 125
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADR 363
+ N + ++H+I+DE+HERD +DF L II+D+L + P L++ILMSA+L+AD
Sbjct: 126 QACPN------MLGISHLIIDEVHERDCLTDFTLVIIKDLLQTNPLLKVILMSASLNADL 179
Query: 364 FSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPEL 417
S+YF P+ V G +PV+ +L ++ + +S S +++A + P D +L
Sbjct: 180 LSRYFDSAPLTHVSGRAFPVQKRFLSEIRQLTQSFGSR-INNAVTLKPMVDQDL 232
>gi|452981173|gb|EME80933.1| hypothetical protein MYCFIDRAFT_78643 [Pseudocercospora fijiensis
CIRAD86]
Length = 1439
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 250/489 (51%), Gaps = 46/489 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA+ + ID LI +LL KI +E AILVFLPG +I + D L+ +P F +
Sbjct: 884 LASYDEYRIDYSLIVKLLEKISHQAEYRDYSKAILVFLPGIAEIRQLNDMLVGHPKF--S 941
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ I PLHS S Q+ F+ PP G RKI+L+TNIAET ITI DV VID+G+ KE
Sbjct: 942 KAWQIFPLHSSFSSEDQQAAFEIPPRGVRKIVLATNIAETGITIPDVTCVIDTGKHKEMR 1001
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIP 709
+D +S L S+++KA+AKQR GRAGR Q G+C+HL+++ R + + Q PE+ R+
Sbjct: 1002 FDERRQMSRLIQSFIAKANAKQRRGRAGRVQQGLCFHLFTKHRFEHMMVEQQTPEMLRLS 1061
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ +IE L + LDPP + IR AI L ++GAL+ +E++T LG +L
Sbjct: 1062 LQDLVMRVKICKLG-DIEKALSEALDPPSARNIRRAIDALVEVGALTANEELTSLGMQLA 1120
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ CLD ALT A + PF P+ + KK+A +
Sbjct: 1121 KLPLDAQLGKLILLGSTFGCLDFALTAAATLSSKSPFLSPM--HAKKQADTVRL---GFQ 1175
Query: 830 GGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
G SD L V A+ W+ E FC++ F+S + + ++ QL L GF
Sbjct: 1176 RGDSDLLTVFNAYSSWRKVCTTSGLSEFQFCNKNFLSPQNLANIEDLKAQLLNSLADAGF 1235
Query: 888 I---PED---VSSCSHNAR------VP----------GIIHAVLMAGLYPMVARLRPPHK 925
+ PE+ +S HN R +P + ++V+ YP V +
Sbjct: 1236 VHLGPEEKQAISKMRHNHRHRNFVLIPPHFARAESNDTVANSVVAWSFYPKVIK-----A 1290
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM-HVRNCTVVGPL 984
G+ + A + LHP S+N D + + I + + + + V +
Sbjct: 1291 YGKGWRNIANNQSLGLHPTSVN---KGNHNHDIKYLSFYSIMQSSSRFTNAQETSPVAEI 1347
Query: 985 PLLLLATEI 993
PL+L+A E+
Sbjct: 1348 PLILMAGEV 1356
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 163/267 (61%), Gaps = 24/267 (8%)
Query: 164 KVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQ 223
+++ + R + +Q++ R LP+ F+D T+ +QV ++ GETGCGK+TQ+P
Sbjct: 620 EIQQMWQRKVSTSKYQQMLIARMNLPMFHFRDAALETIQKHQVTILCGETGCGKSTQLPA 679
Query: 224 FLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKG 277
F+LE+ + G +CKI CT+PRRISA S+A+R+S E GE+ G+ +GY IRLES+
Sbjct: 680 FILENELAHGRSCKIYCTEPRRISAISLAQRVSEEMGESKGELGTPRSLVGYAIRLESQT 739
Query: 278 GKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFML 337
+ +V+ T G++LR+L + D +S +TH+++DE+HER +DF+L
Sbjct: 740 AATTRLVYATVGIVLRMLEN--------------ADGLSEITHLVIDEVHERSIDTDFLL 785
Query: 338 AIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKS 397
++R ++ P L+++LMSAT+DA +FSQY G P+I VPG T+PV++ +LED + +
Sbjct: 786 IVLRSLMFRRPDLKVVLMSATVDAQKFSQYLDGAPIINVPGRTFPVEARFLEDAIELTGH 845
Query: 398 AESNHLDSASLIVPNEDPELTEENKST 424
+ D A +E+ EE K T
Sbjct: 846 TNEDAADRAF----DEESTEDEEQKGT 868
>gi|66827481|ref|XP_647095.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|60475276|gb|EAL73211.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 1451
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 267/528 (50%), Gaps = 83/528 (15%)
Query: 531 LDKYLATVNPELIDLVLIEQLLRKIC--MDSEDGAILVFLPGWEDINKTRDRLLANPFFR 588
L++ +++ + I+L ++E L+ + + +D +ILVF+PG DI + RL P
Sbjct: 865 LNQLKISIDQKRINLDVVESLILHLVNGVLKKDKSILVFVPGLSDILELCSRL-GKPIST 923
Query: 589 DTS----KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSG 644
T + +PLHS + Q+KVF++ P G K++++TNIAET+ITI+DV V+D G
Sbjct: 924 FTEAICQRIWCVPLHSSLSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCG 983
Query: 645 RMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPE 704
R+ + +++ S + W SKAS +QRAGRAGR +G+C+ ++++ + L D PE
Sbjct: 984 RVNQMTFNSITGNSVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFTKSMESQLQDQDTPE 1043
Query: 705 IKRIPIEELCLQVKLL---DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK- 760
I R +++LCL VKL + N I+DFL + ++PP S I+++I L I AL ++++
Sbjct: 1044 ILRTSLQQLCLHVKLFLKNNKNTTIQDFLNRAIEPPSSEQIQSSINELISIDALKINQQQ 1103
Query: 761 ---VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR 817
+T LG L L V + KML F + CLDP LT+A +Y+ PF ++P +K
Sbjct: 1104 QQELTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNYKSPF---LNPPDKTI 1160
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQ 877
KF + QSD +I A+ W+ + Q G E FC + ++S + + ++ Q
Sbjct: 1161 RPMDKFSSPN----QSDHQTLINAYNSWRKSIQDGNEYQFCRENYLSIPTLRTIQDLKLQ 1216
Query: 878 LQTELIKNGFIPEDVSS--------------------C---------SHNARVPGIIHAV 908
L + GF+P+ +++ C + N+ II +V
Sbjct: 1217 FVEILSEIGFLPQSITAKKIAKLQQQQQQKGNNYSNDCIDEFVGYIYNSNSSKSKIITSV 1276
Query: 909 LMAGLYPMVARLRPPHKNGRRFVETAGGA--------------------------KVRLH 942
L AG+YP +AR+ P ++ +TA GA +V +H
Sbjct: 1277 LCAGMYPKIARIDYP---DAKYSQTASGAIKNKYSPESLLLLTKPPNCGPGKPLERVFIH 1333
Query: 943 PHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P S NFK + P ++Y++ + + + + T + PL LLL +
Sbjct: 1334 PRSTNFK---EGEWVYPFIIYNDKVKT-SKLFLHHITNLSPLTLLLFS 1377
Score = 192 bits (489), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 148/234 (63%), Gaps = 23/234 (9%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
++++R LP+ K + NQVV+I+ ETGCGK+TQ+PQ++LE S KG C I
Sbjct: 618 VIKKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSECNI 677
Query: 239 VCTQPRRISATSVAERISVERG----EN-IGDNIGYKIRLESKGGKHSSIVFCTNGVLLR 293
VCTQPRRISA VAER+S E EN IG +GY+IR ESK + + ++FCT G+LLR
Sbjct: 678 VCTQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLR 737
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
R+ + SN +S L+HII+DE+HER +DF+L I+R+++ L++I
Sbjct: 738 --------RILDVSN------ISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKII 783
Query: 354 LMSATLDADRFSQYFGGC--PVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDS 405
LMSATL+A + + YF + +PGFT+PVK+ Y+ +VL ++ N+ DS
Sbjct: 784 LMSATLNAKQIANYFKCTDDSIFSIPGFTFPVKNIYINEVLPLINKYNPNYKDS 837
>gi|340521891|gb|EGR52124.1| Hypothetical protein TRIREDRAFT_53044 [Trichoderma reesei QM6a]
Length = 1350
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 232/433 (53%), Gaps = 24/433 (5%)
Query: 522 LSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL 581
+ D +++ K +N LI ++ + ++ + + G IL+FLPG +IN+ + L
Sbjct: 807 IGDETMGKVIQKLGHRINYSLITEA-VKAIDYELSYEKKTGGILIFLPGVGEINQACNSL 865
Query: 582 LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
R + ++PLH+ + + +QK+VF PPPG RK++++TN+AET+ITIDD+V VI
Sbjct: 866 ------RSINSLHVLPLHASLETKEQKRVFSSPPPGKRKVVVATNVAETSITIDDIVVVI 919
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ 701
DSG++KE S+DP NN+ L+ +W S+A+ KQR GRAGR QAG C+ L++Q ++
Sbjct: 920 DSGKVKETSFDPQNNMRKLEETWASQAACKQRQGRAGRVQAGKCFKLFTQNLEQNMAPRP 979
Query: 702 VPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
PEI+R+P+E+LCL V+ + ++ FL ++ PP + I A+ +L+ +GAL DE +
Sbjct: 980 EPEIRRVPLEQLCLSVRAMGMK-DVVRFLGRSPTPPATPAIEGAMTLLRRMGALDGDE-L 1037
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T +G++L L K++ F + CLD +T+A R PF P ++ R
Sbjct: 1038 TAMGQQLAMLPADLRCGKLMVFGAIFGCLDDCITIAAILSTRSPFVAPQERRDEAREARM 1097
Query: 822 KFELASLYGGQSDQLAVIAAFECWKN-AKQRG----QEAWFCSQYFVSSGVMNMLLGMRK 876
+F Y G D L + AF W + RG + FC F+S + + R
Sbjct: 1098 RF-----YRGDGDPLTDLEAFTQWDEMMRDRGTPQREIRRFCDDNFLSFQTLTDIANTRS 1152
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGG 936
Q L + G I S + R ++ A++ + P +AR++ P K +F + G
Sbjct: 1153 QYYDALTEIG-IHSPSSQAAPGGRNTLLLRALVASAFTPQIARIQYPDK---KFAASVSG 1208
Query: 937 AKVRLHPHSLNFK 949
A V L P + K
Sbjct: 1209 A-VELDPEARAIK 1220
Score = 172 bits (437), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 142/227 (62%), Gaps = 21/227 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETC 236
R+++ +R LP +D I TV+ NQV +ISGETG GK+TQ QFLL+ ++ +G
Sbjct: 577 REMITKRQALPAWQMQDAIVQTVNKNQVTIISGETGSGKSTQSVQFLLDDLYERGLGGCA 636
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
++ TQPRRISA +A+R++ ER +G +GY IR ES+ + + I F T GVLLR L
Sbjct: 637 NMIVTQPRRISALGLADRVAEERCSRVGGEVGYAIRGESRQSRETRITFVTTGVLLRRLQ 696
Query: 297 SQGVSRLKEASNKPAKDDVSA----LTHIIVDEIHERDRYSDFMLAIIRD-MLPSYPHLR 351
+ G R+ DDV A ++HII+DE+HER +DF+L ++R+ M+ L+
Sbjct: 697 TSG-GRV---------DDVVASLADVSHIIIDEVHERSLDTDFLLNLLREVMIQKKDMLK 746
Query: 352 LILMSATLDADRFSQYF--GGCPV--IQVPGFTYPVKSFYLEDVLSI 394
L+LMSATLDA F YF G V +++ G TYPV+ ++L+DV+ +
Sbjct: 747 LVLMSATLDAATFKSYFESEGLSVGTVEIAGRTYPVEEYHLDDVIRM 793
>gi|195430156|ref|XP_002063122.1| GK21754 [Drosophila willistoni]
gi|194159207|gb|EDW74108.1| GK21754 [Drosophila willistoni]
Length = 1401
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 262/505 (51%), Gaps = 32/505 (6%)
Query: 503 EQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDG 562
E +PEV N + D+ + +A ++ + L+E LL I G
Sbjct: 616 EDREEPEVNY-------NNIIDTKYSEQTRNAMAALSESDVSFELLECLLMHIKSKEIPG 668
Query: 563 AILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
AILVFLPGW I + L N +S++ I+P HS +P Q+KVF+ P G KII
Sbjct: 669 AILVFLPGWNLIFALM-KFLQNSQHFGSSRYRILPCHSQIPRDDQRKVFEPVPDGVTKII 727
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQA 682
LSTNIAET+ITIDD+V+VID + + K + +NN+++ + W SK + +QR GRAGR +
Sbjct: 728 LSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNMEQRKGRAGRVRP 787
Query: 683 GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTI 742
G C+ L S+ R A+L D PE+ R P+ EL L VKLL I FL K L+PP +
Sbjct: 788 GFCFTLCSKARYAALDDNLTPEMFRTPLHELALTVKLLHLGA-IHHFLSKALEPPPVDAV 846
Query: 743 RNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC-ASD 801
A ++L+++ L ++++T LG L L + P + KML + C D A ++A +S
Sbjct: 847 IEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMLVLGTVFGCADLAASMASYSST 906
Query: 802 YRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRG--QEAWFC 858
+ + F L I +++ A K +L G + SD +A+I A + W++AKQRG +E FC
Sbjct: 907 FSEVFALEIG--QRRLANHQK----ALSGIKCSDHVAMIVASQMWQHAKQRGEMEEMNFC 960
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGF-----IPEDVSSCSHNARVPGIIHAVLMAGL 913
+ MN++ ++QL L + GF I V + S + V + +L GL
Sbjct: 961 DWKGLQMSTMNVMYDAKQQLLDLLSQAGFPEEAMITHKVDAHSTDDPVLDVALGLLCLGL 1020
Query: 914 YPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
YP + HK R+ + T A + LH S+N + T P V+ E R +
Sbjct: 1021 YPNIC----VHKEKRKVLTTESKAAL-LHKTSVNCS-NLAITFPYPYFVFGEKIRTR-AV 1073
Query: 974 HVRNCTVVGPLPLLLLAT-EIAVAP 997
+ ++V PL ++L +I +AP
Sbjct: 1074 SCKQLSMVAPLQVMLFGCRKIDLAP 1098
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/239 (48%), Positives = 161/239 (67%), Gaps = 20/239 (8%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++MK E L R + +A R +E R KLPI++ + I ++ N VV+I G TGCGKT
Sbjct: 368 DLSMKFERQLLERRKSNAEYRTFLEFRDKLPITAMRADIMHAINENPVVIIRGNTGCGKT 427
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD++GY +R ES
Sbjct: 428 TQIAQYILDDYIRSGQGAYANIYVTQPRRISAISVAERVARERCEELGDSVGYSVRFESV 487
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GV+LR L EA + ++HIIVDEIHERD SDF
Sbjct: 488 FPRPYGAILFCTVGVMLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 531
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L I+RDM+ +YP L +ILMSAT+D F++YFGGCPVI+VPG +PV+ ++LEDVL +
Sbjct: 532 LLVILRDMVATYPDLHVILMSATIDTTLFARYFGGCPVIEVPGRAFPVEQYFLEDVLQM 590
>gi|350582499|ref|XP_003481283.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Sus
scrofa]
Length = 610
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 186/282 (65%), Gaps = 8/282 (2%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF-- 587
K ++ ++ E ++L LIE LL I GAILVFLPG +I ++L +N F
Sbjct: 282 KTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNN 341
Query: 588 RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMK 647
R +++ V+ PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MK
Sbjct: 342 RRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMK 401
Query: 648 EKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIK 706
EK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+
Sbjct: 402 EKRYDASKGMESLEDTFVSQANALQRKGRAGRVTSGVCFHLFTSHHFNHQLLKQQLPEIQ 461
Query: 707 RIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTEL 764
R+P+E+LCL++K+L+ N++ + ++PP ++R + I L+D+GAL+ DEK+T L
Sbjct: 462 RVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHPDSLRASKIRLRDLGALTPDEKLTPL 521
Query: 765 GEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPF 806
G L L V + K++ F + CLDPALT+A + ++ PF
Sbjct: 522 GYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPF 563
>gi|344237402|gb|EGV93505.1| Putative ATP-dependent RNA helicase DHX57 [Cricetulus griseus]
Length = 1115
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 212/345 (61%), Gaps = 32/345 (9%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHM--ENALSDSMKQQLLD-------------- 532
+LKA+ RTA + E++ + + H+ E+++ D++ Q LD
Sbjct: 754 KLKARHNRTAFEEVEEDLR------LSLHLQDEDSVKDTIPDQQLDFKQLLARYKGVNKS 807
Query: 533 --KYLATVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF 587
K ++ ++ E ++ LIE LL I GAILVFLPG +I ++L +N F
Sbjct: 808 VIKTMSVMDFERVNFDLIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLF 867
Query: 588 --RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGR 645
R + + VI PLHS + S +Q+ VF +PP G KII+STNIAE++ITIDDVVYVIDSG+
Sbjct: 868 NNRRSHRCVIHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAESSITIDDVVYVIDSGK 927
Query: 646 MKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPE 704
MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S + L Q+PE
Sbjct: 928 MKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYSHQLLKQQIPE 987
Query: 705 IKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
I+R+P+E+LCL++K+L+ + N++ + ++PP ++R + + L+D+GAL+ DEK+T
Sbjct: 988 IQRVPLEQLCLRIKILEMFSSHNLQSVFARLIEPPHIDSLRASKVRLRDLGALTPDEKLT 1047
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
LG L L V + K++ F + CLDPALT+A + ++ PF
Sbjct: 1048 PLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFV 1092
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 145/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L++ + I
Sbjct: 531 ILQERQSLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 590
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 591 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 648
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ P L++ILMSAT
Sbjct: 649 GDATLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVSQRPTLQVILMSAT 696
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LDA FS+YF CPVI +PG +PV F+LED +++ +
Sbjct: 697 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDAIAVTR 734
>gi|91078338|ref|XP_973454.1| PREDICTED: similar to maleless protein [Tribolium castaneum]
Length = 1220
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 248/464 (53%), Gaps = 21/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A ++ + L+E LL+ I GA+LVFLPGW I L +P F + +
Sbjct: 616 MARMSEREVSFELMEALLKYIKSQEIPGAVLVFLPGWNLIFAMMRHLQQHPVF-GGAAYR 674
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PLHS +P Q++VF+ PP K+IL+TNIAET+ITI+DVV+VIDS + K K + +
Sbjct: 675 VLPLHSQIPREDQRRVFEPVPPHVTKVILATNIAETSITINDVVFVIDSCKAKIKLFTSH 734
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+++ + W S+ + +QR GRAGR + G C+HL S+ R L + PE+ R P+ EL
Sbjct: 735 NNMTSYATVWASRTNLEQRKGRAGRVRPGFCFHLCSKARFDKLDEHMTPEMFRTPLHELA 794
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL K ++PP + A ++L+++ L ++++T LG + L +
Sbjct: 795 LSIKLLKLG-SIGHFLSKAIEPPPLDAVIEAEVLLREMKCLDSNDELTPLGRIIAKLPIE 853
Query: 775 PLMSKMLFFAILMDCLDPALTLAC-ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
P + KM+ + C P T+A +S + + FTL + ++R + + LA S
Sbjct: 854 PRLGKMMVLGCIFMCGGPLATMAANSSTFPEIFTLDMG---QRRLSHHQKALAG--DRCS 908
Query: 834 DQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A++ AFE W A+ G+EA FC +S M + + QLQ L GF E
Sbjct: 909 DHVAMLTAFELWDQARAGGEEAEQRFCEYKGISMPTMRVTWEAKHQLQQILNSVGFPEET 968
Query: 892 VSSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+S + P ++ A++ GLYP V HK R+ + T A + +H S+N
Sbjct: 969 LSPIPMDTVGPDPKLDVVMALMCYGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVN 1023
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
+F++T P V+ E R + + ++V P+ LLL +
Sbjct: 1024 CS-NFEQTFPYPFFVFGEKIRTR-AVSCKQMSMVTPIHLLLFGS 1065
Score = 213 bits (541), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 154/232 (66%), Gaps = 19/232 (8%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
E ++ D +L+ I+ ER LP+ S K I + ++ N V++I G TGCGKTTQV Q++
Sbjct: 348 EETKQKLNHDVDLKAIISERQGLPVYSMKGQIMAAINDNPVIIIKGNTGCGKTTQVCQYI 407
Query: 226 LE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSS 282
LE +I S +G C I TQPRRISA SV+ER++ ER E +G ++GY +R ES + + S
Sbjct: 408 LEDYIMSGQGAWCNICITQPRRISAVSVSERVANERCEALGQSVGYSVRFESVLPRPYGS 467
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
I+FCT GVLL+ L ++ + ++H+IVDEIHERD SDF++ ++RD
Sbjct: 468 IMFCTVGVLLKKL----------------ENGLRGVSHVIVDEIHERDVNSDFIMVVLRD 511
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
M+ +YP LR+ILMSAT+D FS+YF CPV+++ G TYPV+ ++LED + +
Sbjct: 512 MIHTYPDLRVILMSATIDTSLFSKYFNNCPVVEIAGRTYPVQQYFLEDCVEL 563
>gi|156042251|ref|XP_001587683.1| hypothetical protein SS1G_11676 [Sclerotinia sclerotiorum 1980]
gi|154696059|gb|EDN95797.1| hypothetical protein SS1G_11676 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1399
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 225/421 (53%), Gaps = 32/421 (7%)
Query: 543 IDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ LI Q +++I + +DG IL+F+PG +I +T D L P +PL
Sbjct: 852 INYDLISQTVKEIDAELTHLKQDGGILIFMPGLVEITRTLDYLKTIPNLH------ALPL 905
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + S Q+KVF P G RK+I++TN+AET+ITIDD+V VID+GR+KE SYDP NN+
Sbjct: 906 HASLQSSDQRKVFPHAPYGKRKVIVATNVAETSITIDDIVAVIDTGRVKETSYDPQNNMR 965
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQV 717
L+ W S+A+ KQR GRAGR QAG CY LY++ + + + PEI+R+P+E+LCL V
Sbjct: 966 KLEEVWASRAACKQRRGRAGRVQAGKCYKLYTRNAEKSKMMERPEPEIRRVPLEQLCLSV 1025
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
+ + + FL + PP S+ + A+ +L+ +GAL D+ +T LG L +
Sbjct: 1026 RAMGIK-EVGSFLASAITPPESMAVDGAMDLLRRMGALDGDD-LTALGRHLSMIPADLRC 1083
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ + + CLD A+T+A + PF P E+ ++ A+F Q D +
Sbjct: 1084 GKLMVYGAMFGCLDAAVTIAAILTVKSPFVSPQDKREESKSARARFA-----KNQGDLIG 1138
Query: 838 VIAAFECW------KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
+ AFE W +N +Q W C+ ++S +N + R Q T L + GFIP
Sbjct: 1139 DLRAFEEWYEIINNRNYRQGEIRNW-CNDNYLSYQTLNDISSNRTQYLTSLREIGFIPSS 1197
Query: 892 V---SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
S+ S + +I ++ P +AR+ P K +F + GA V L P +
Sbjct: 1198 SILPSALSAKSSNNALIRSLCAGAFNPQLARIDFPDK---KFAASVSGA-VELDPEAKTI 1253
Query: 949 K 949
K
Sbjct: 1254 K 1254
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 143/226 (63%), Gaps = 19/226 (8%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
L +++ R LP KD+I TV S+QV +ISGETG GK+TQ QF+L+ ++ + G+
Sbjct: 601 LESMIKGRRTLPAWEMKDIIVDTVSSHQVTIISGETGSGKSTQSAQFILDDMYQRAFGDC 660
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
KI+CTQPRRISA +A+R+S ER +G +GY IR ESK ++ I F T GVLLR L
Sbjct: 661 AKIICTQPRRISALGLADRVSDERCSAVGQEVGYIIRGESKASPNTKITFVTTGVLLRRL 720
Query: 296 VSQGVSRLKEASNKPAKDDVSA----LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
+ G S DDV A ++H+I+DE+HER +DF+L ++RD+L L+
Sbjct: 721 QTSGGS----------SDDVVASLADVSHVIIDEVHERSLDTDFLLVLLRDVLRQRKDLK 770
Query: 352 LILMSATLDADRFSQYF---GGCPVIQVPGFTYPVKSFYLEDVLSI 394
LILMSATLDA F YF G +++ G TYPV+ +YL+DV+ +
Sbjct: 771 LILMSATLDAGIFEDYFKSGGEVGRVEISGRTYPVEDYYLDDVIRM 816
>gi|270003897|gb|EFA00345.1| hypothetical protein TcasGA2_TC003184 [Tribolium castaneum]
Length = 1222
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 248/464 (53%), Gaps = 21/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A ++ + L+E LL+ I GA+LVFLPGW I L +P F + +
Sbjct: 616 MARMSEREVSFELMEALLKYIKSQEIPGAVLVFLPGWNLIFAMMRHLQQHPVF-GGAAYR 674
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PLHS +P Q++VF+ PP K+IL+TNIAET+ITI+DVV+VIDS + K K + +
Sbjct: 675 VLPLHSQIPREDQRRVFEPVPPHVTKVILATNIAETSITINDVVFVIDSCKAKIKLFTSH 734
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+++ + W S+ + +QR GRAGR + G C+HL S+ R L + PE+ R P+ EL
Sbjct: 735 NNMTSYATVWASRTNLEQRKGRAGRVRPGFCFHLCSKARFDKLDEHMTPEMFRTPLHELA 794
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL K ++PP + A ++L+++ L ++++T LG + L +
Sbjct: 795 LSIKLLKLG-SIGHFLSKAIEPPPLDAVIEAEVLLREMKCLDSNDELTPLGRIIAKLPIE 853
Query: 775 PLMSKMLFFAILMDCLDPALTLAC-ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
P + KM+ + C P T+A +S + + FTL + ++R + + LA S
Sbjct: 854 PRLGKMMVLGCIFMCGGPLATMAANSSTFPEIFTLDMG---QRRLSHHQKALAG--DRCS 908
Query: 834 DQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D +A++ AFE W A+ G+EA FC +S M + + QLQ L GF E
Sbjct: 909 DHVAMLTAFELWDQARAGGEEAEQRFCEYKGISMPTMRVTWEAKHQLQQILNSVGFPEET 968
Query: 892 VSSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+S + P ++ A++ GLYP V HK R+ + T A + +H S+N
Sbjct: 969 LSPIPMDTVGPDPKLDVVMALMCYGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVN 1023
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
+F++T P V+ E R + + ++V P+ LLL +
Sbjct: 1024 CS-NFEQTFPYPFFVFGEKIRTR-AVSCKQMSMVTPIHLLLFGS 1065
Score = 213 bits (541), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 154/232 (66%), Gaps = 19/232 (8%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
E ++ D +L+ I+ ER LP+ S K I + ++ N V++I G TGCGKTTQV Q++
Sbjct: 348 EETKQKLNHDVDLKAIISERQGLPVYSMKGQIMAAINDNPVIIIKGNTGCGKTTQVCQYI 407
Query: 226 LE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSS 282
LE +I S +G C I TQPRRISA SV+ER++ ER E +G ++GY +R ES + + S
Sbjct: 408 LEDYIMSGQGAWCNICITQPRRISAVSVSERVANERCEALGQSVGYSVRFESVLPRPYGS 467
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
I+FCT GVLL+ L ++ + ++H+IVDEIHERD SDF++ ++RD
Sbjct: 468 IMFCTVGVLLKKL----------------ENGLRGVSHVIVDEIHERDVNSDFIMVVLRD 511
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
M+ +YP LR+ILMSAT+D FS+YF CPV+++ G TYPV+ ++LED + +
Sbjct: 512 MIHTYPDLRVILMSATIDTSLFSKYFNNCPVVEIAGRTYPVQQYFLEDCVEL 563
>gi|443921919|gb|ELU41447.1| DEAH box polypeptide 36 [Rhizoctonia solani AG-1 IA]
Length = 1184
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 249/486 (51%), Gaps = 40/486 (8%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDI--------NKTRDRLLANPFFRDTSKFVIIPL 598
L+ + + S+DG +LVFLPGW+++ ++ + L + F RD KF + L
Sbjct: 534 LVALTIAHVIKKSDDGHVLVFLPGWDEMMSLQKILDDRHQALLGVDLFNRD--KFSLHLL 591
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS VP +Q+ VF P PG R+IIL+TNIAET+ITI DVVYV+D+ R+KEK YDP ++S
Sbjct: 592 HSTVPVAEQQAVFDPPRPGVRRIILATNIAETSITIPDVVYVVDTARIKEKRYDPARHMS 651
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
+L S+WV ++ QRAGRAGR ++G Y + S+ R A+L +Q+ E+KR + + + VK
Sbjct: 652 SLVSAWVGSSNLNQRAGRAGRHRSGEYYGIISKARLATLEPYQLVEMKRTDLTNVVMHVK 711
Query: 719 LLD-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
++ P +E L +T++PP + + +A+ L +GAL + +T LG L L V +
Sbjct: 712 AINFPGMEVEQVLAETIEPPEAERVASAMRSLMMVGALDSQKNLTSLGRVLLQLPVEVAV 771
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
+++ + CLD ALTLA RDPF PI+ K+ A AAK E S +SD LA
Sbjct: 772 GRLVLYGSFFKCLDQALTLAAILTNRDPFMAPIA--LKQEANAAK-ERWSSNDFRSDALA 828
Query: 838 VIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
+ A+ W + RG+ FCS+ F+S + + ++ L L G +
Sbjct: 829 TLNAYNTWWAMQDRGEYVTANRFCSENFLSKPSLLNIQRIKGHLLQSLYYAGVLDISAGG 888
Query: 895 CSHNARVPGII-----------HAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHP 943
S N RV + L+A L + + ++ + T +HP
Sbjct: 889 TSSNHRVARDMVVPPELNEHGDSKPLLAALIAIACQPNFAIRHKEKMYRTREDKTAFIHP 948
Query: 944 HSLNFKL--------SFKKTDDCPLMVYDEITRG---DGGMHVRNCTVVGPLPLLLL-AT 991
S+N + + + L + E TR G + +RNCT + P+ +L A
Sbjct: 949 GSVNHRRRQAVDQHKDLVEMGERELFAFAEKTRNTAQGGQLFLRNCTRLDPMTYMLFGAY 1008
Query: 992 EIAVAP 997
++ V P
Sbjct: 1009 DLVVTP 1014
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 145/241 (60%), Gaps = 17/241 (7%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW-- 230
E D + + E R LP+ + + + +T++ N V + TG GKTTQVPQ +L+ +
Sbjct: 240 ENDPKMAHMRETRRSLPVYTRAEDLLATIEQNDVTICMAATGSGKTTQVPQLILDQMIER 299
Query: 231 SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNG 289
KG C IVCTQPRRI+A SVAERI+ ERGE++G +IGY++R E+K +H +I FCT G
Sbjct: 300 GKGSRCNIVCTQPRRIAAISVAERIAKERGESLGQSIGYQVRFEAKFPQEHGNITFCTTG 359
Query: 290 VLLRLLVSQGV--SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR----DM 343
+ L+ + S + S+ K DDV THI+VDE+HERD +D +L +++ D
Sbjct: 360 IFLKRMQSALLEQSQGKRHGTGHGLDDV---THILVDEVHERDVDTDLLLVVLKRLLADR 416
Query: 344 LPSYPHLRLILMSATLDADRFSQYFGG-----CPVIQVPGFTYPVKSFYLEDVLSILKSA 398
L+++LMSAT+D F YF PV +VPG ++PV +Y++D++ L +
Sbjct: 417 RARQKPLKIVLMSATIDPTLFQTYFASDDGTPAPVAEVPGRSFPVSKYYMDDIIQQLSTI 476
Query: 399 E 399
+
Sbjct: 477 Q 477
>gi|340521890|gb|EGR52123.1| hypothetical protein TRIREDRAFT_53044 [Trichoderma reesei QM6a]
Length = 1366
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 232/433 (53%), Gaps = 24/433 (5%)
Query: 522 LSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL 581
+ D +++ K +N LI ++ + ++ + + G IL+FLPG +IN+ + L
Sbjct: 823 IGDETMGKVIQKLGHRINYSLITEA-VKAIDYELSYEKKTGGILIFLPGVGEINQACNSL 881
Query: 582 LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
R + ++PLH+ + + +QK+VF PPPG RK++++TN+AET+ITIDD+V VI
Sbjct: 882 ------RSINSLHVLPLHASLETKEQKRVFSSPPPGKRKVVVATNVAETSITIDDIVVVI 935
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ 701
DSG++KE S+DP NN+ L+ +W S+A+ KQR GRAGR QAG C+ L++Q ++
Sbjct: 936 DSGKVKETSFDPQNNMRKLEETWASQAACKQRQGRAGRVQAGKCFKLFTQNLEQNMAPRP 995
Query: 702 VPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
PEI+R+P+E+LCL V+ + ++ FL ++ PP + I A+ +L+ +GAL DE +
Sbjct: 996 EPEIRRVPLEQLCLSVRAMGMK-DVVRFLGRSPTPPATPAIEGAMTLLRRMGALDGDE-L 1053
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T +G++L L K++ F + CLD +T+A R PF P ++ R
Sbjct: 1054 TAMGQQLAMLPADLRCGKLMVFGAIFGCLDDCITIAAILSTRSPFVAPQERRDEAREARM 1113
Query: 822 KFELASLYGGQSDQLAVIAAFECWKN-AKQRG----QEAWFCSQYFVSSGVMNMLLGMRK 876
+F Y G D L + AF W + RG + FC F+S + + R
Sbjct: 1114 RF-----YRGDGDPLTDLEAFTQWDEMMRDRGTPQREIRRFCDDNFLSFQTLTDIANTRS 1168
Query: 877 QLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGG 936
Q L + G I S + R ++ A++ + P +AR++ P K +F + G
Sbjct: 1169 QYYDALTEIG-IHSPSSQAAPGGRNTLLLRALVASAFTPQIARIQYPDK---KFAASVSG 1224
Query: 937 AKVRLHPHSLNFK 949
A V L P + K
Sbjct: 1225 A-VELDPEARAIK 1236
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 142/227 (62%), Gaps = 21/227 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETC 236
R+++ +R LP +D I TV+ NQV +ISGETG GK+TQ QFLL+ ++ +G
Sbjct: 593 REMITKRQALPAWQMQDAIVQTVNKNQVTIISGETGSGKSTQSVQFLLDDLYERGLGGCA 652
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
++ TQPRRISA +A+R++ ER +G +GY IR ES+ + + I F T GVLLR L
Sbjct: 653 NMIVTQPRRISALGLADRVAEERCSRVGGEVGYAIRGESRQSRETRITFVTTGVLLRRLQ 712
Query: 297 SQGVSRLKEASNKPAKDDVSA----LTHIIVDEIHERDRYSDFMLAIIRD-MLPSYPHLR 351
+ G R+ DDV A ++HII+DE+HER +DF+L ++R+ M+ L+
Sbjct: 713 TSG-GRV---------DDVVASLADVSHIIIDEVHERSLDTDFLLNLLREVMIQKKDMLK 762
Query: 352 LILMSATLDADRFSQYF--GGCPV--IQVPGFTYPVKSFYLEDVLSI 394
L+LMSATLDA F YF G V +++ G TYPV+ ++L+DV+ +
Sbjct: 763 LVLMSATLDAATFKSYFESEGLSVGTVEIAGRTYPVEEYHLDDVIRM 809
>gi|302409294|ref|XP_003002481.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
[Verticillium albo-atrum VaMs.102]
gi|261358514|gb|EEY20942.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
[Verticillium albo-atrum VaMs.102]
Length = 1436
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 242/498 (48%), Gaps = 57/498 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ ID LI QL+ KI D AILVFLPG +I D LL +P F
Sbjct: 875 LAQMDEYRIDFDLIVQLIAKIAADPSYSQFSKAILVFLPGIAEIRTINDMLLGDPSF--A 932
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++I PLHS + + Q+ F PPPG RK++L+TNIAET ITI DV VID+G+ +E
Sbjct: 933 KDWLIYPLHSSIATEDQEAAFLVPPPGIRKVVLATNIAETGITIPDVTCVIDTGKHREMR 992
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R A + D Q PE+ R+
Sbjct: 993 FDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTKHRHDALISDQQTPEMLRLS 1052
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L + LD P + IR A+ L D+ AL+ E++T LG +L
Sbjct: 1053 LQDLAIRVKICKIG-GIEETLSEALDAPSAKNIRRAVDALIDVRALTNAEELTPLGHQLA 1111
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD A+T+A + PF+ P +RA A +
Sbjct: 1112 RLPLDVFLGKLILLGTVFKCLDMAITVAAILSSKSPFSAPFG----QRAQADMVRMG-FR 1166
Query: 830 GGQSDQLAVIAAFECWKNAKQR-----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L + A+ W+ Q G+E FC + F+S + + ++ QL L+
Sbjct: 1167 RGDSDLLTIYNAYLAWRRVCQTTSASGGKEFQFCRKNFLSQQTLANIEDLKGQLMVSLVD 1226
Query: 885 NGF-----------------------------IPEDVSSCSHNARVPGIIHAVLMAGLYP 915
+GF IP+ V+ S N I AV+ YP
Sbjct: 1227 SGFLSLTDDERRALNRLRYSNNSRRRHQQFFEIPQRVNLNSEN---DAITTAVIAWSFYP 1283
Query: 916 MVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
+ P G R V + LHP S+N K ++ + Y I + H
Sbjct: 1284 KLLVRDTPGSRGLRNV--GNNQSISLHPSSVN-----KGHNEIRWLSYYHIMQSKAVYHA 1336
Query: 976 RNCTVVGPLPLLLLATEI 993
+ + LL ++
Sbjct: 1337 HETSAADAFAIALLCGDV 1354
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 146/220 (66%), Gaps = 20/220 (9%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+++ R +LP+ F+ + TVD QVV+I GETGCGK+TQVP FLLEH ++G+ CKI C
Sbjct: 624 MLQSRMQLPMWQFRQQVVDTVDREQVVIICGETGCGKSTQVPSFLLEHQLAQGKPCKIYC 683
Query: 241 TQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A R+S E GE GD +GY IRLE+ K + +VF T G+++R+
Sbjct: 684 TEPRRISAISLARRVSEELGEGRGDIGTPRSLVGYSIRLEANTSKETRLVFATTGIVMRM 743
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L E SN D+ +TH+++DE+HER SDF+L +++ ++ L+++L
Sbjct: 744 L---------EGSN-----DLREVTHLVLDEVHERSIDSDFLLIVLKKLMLRRKDLKVVL 789
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
MSAT+DA+RFS Y G PV+ VPG T+PV+ YLED + +
Sbjct: 790 MSATVDAERFSNYLGNAPVLTVPGRTFPVQVRYLEDAIEL 829
>gi|308813796|ref|XP_003084204.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus
tauri]
gi|116056087|emb|CAL58620.1| mRNA splicing factor ATP-dependent RNA helicase (ISS), partial
[Ostreococcus tauri]
Length = 1337
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 187/630 (29%), Positives = 300/630 (47%), Gaps = 72/630 (11%)
Query: 511 AQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDS-EDGAILVFLP 569
A+ + M D+ +Q K ++ + +L LV + + + I D+ G+IL FLP
Sbjct: 707 ARTGESSMRKGAGDTRVRQNESKEVSELTMQL--LVEVAKHIASIETDAGRKGSILCFLP 764
Query: 570 GWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAE 629
GW++I + L K +IPLHS +P +Q+KVF P G K+I +TNIAE
Sbjct: 765 GWDEIKTAMEILQDTTDAELYGKMNVIPLHSTIPQEEQQKVFVPAPDGVVKVIFATNIAE 824
Query: 630 TAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY 689
+++TI+DV+ V+DSG ++E S++P + +S +++ S+ASA QR GRAGR G CY +Y
Sbjct: 825 SSVTINDVLAVVDSGLVREMSWNPESGMSCMETVTTSRASATQRTGRAGRVAPGSCYRIY 884
Query: 690 SQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVL 749
S ++ + PEI+R +E CLQ + N IE FL K +DPP ++ A+ L
Sbjct: 885 SHGTLHAMEERPTPEIQRTALEATCLQTCSMT-NTGIERFLSKAMDPPSLESVEYAMDRL 943
Query: 750 QDIGALSLDEK-----VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRD 804
+GA+ +E +T +G L L + P +ML ++ CLDP LT A RD
Sbjct: 944 LKLGAIKSNETTGGEDLTPMGRLLSILPLDPGTGRMLIMGAVLRCLDPVLTAAACFSSRD 1003
Query: 805 PFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW-----FCS 859
PF +P ++ R ++ + SD LA + A+ +++ ++ W + S
Sbjct: 1004 PFYVPPGMRDEAR------QIRQSFCATSDLLATVRAYGTFQDILY--EQGWDSARRWAS 1055
Query: 860 QYFVSSGVMNMLLGMRKQLQTELIKNGFIPE-DVSSCSHNARV-------------PGII 905
FVS +N + +R QL EL + G + + D+ S SHN + +
Sbjct: 1056 DNFVSINALNTITSVRSQLLHELNRIGLVQDTDLDSRSHNKKTLRFDASVNLNASNESLF 1115
Query: 906 HAVLMAGLYPMVARLRPPHKNG---RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL-- 960
AV AGL +A RP G R E AG LHP S+ F + D PL
Sbjct: 1116 TAVWAAGLPGNIASRRPFGNFGTLRTRTEEHAG-----LHPSSVAFHRKPPR-DRTPLPV 1169
Query: 961 -MVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENE 1019
+Y E+ + +R+ T + P L+LL + D + D DE+
Sbjct: 1170 WFLYKEMMLS-SQVFLRDVTAMRPEQLMLLGGHAL-----------QKRDFTGADGDESP 1217
Query: 1020 SDEDCMEIDDKTSGQHGENVMSSPDKSVTV----VVDRWLYFGSTALDIAQIYC-LRERL 1074
E + +D SG N ++ D V ++D W+ S+ D A + +R +
Sbjct: 1218 ESEGAL-LD--ASG----NPIAEDDDPRRVGPRLMLDDWIVIHSSCADTADLLTDVRREI 1270
Query: 1075 SVAILFKVTHPQKALPPVLEASMYAMASIL 1104
A+ KV +P+K LP E ++A++ +
Sbjct: 1271 DAALALKVMNPRKPLPDASEDIIHAVSRLF 1300
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 140/230 (60%), Gaps = 40/230 (17%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE- 234
A++++I R LPI + ++ + + + QVV++SG TG GK+TQ PQ++LE + G
Sbjct: 366 ADMKRI---RDALPIKAIREELVEALRTQQVVVVSGGTGSGKSTQCPQYILEDAIATGNG 422
Query: 235 -TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS-SIVFCTNGVLL 292
T +IV TQPRRI+A SVAER++ ER E +G ++G+ +RL + + SI FC GV
Sbjct: 423 PTTRIVVTQPRRIAAISVAERVAAERDEPVGSSVGFAVRLHGTSPRDAASIEFCYYGV-- 480
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
S G+S H+++DE+HERD +DF+L ++R+++ + P LR+
Sbjct: 481 ----SYGIS------------------HVMIDEVHERDINTDFLLVLLRELITTRPDLRV 518
Query: 353 ILMSATLDADRFSQYFG---------GCPVIQVPGF-TYPVKSFYLEDVL 392
+LMSATLDA+ FS+YF G P++ VP +PV+ F+LED+L
Sbjct: 519 VLMSATLDAESFSEYFTGSGTHDLEQGVPLMSVPTKPRHPVEIFHLEDML 568
>gi|169600435|ref|XP_001793640.1| hypothetical protein SNOG_03051 [Phaeosphaeria nodorum SN15]
gi|160705439|gb|EAT89782.2| hypothetical protein SNOG_03051 [Phaeosphaeria nodorum SN15]
Length = 1278
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 251/485 (51%), Gaps = 47/485 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L+T + ID LI +L+ + D + A+LVFLPG +I + D L +P F +
Sbjct: 721 LSTYDEYAIDYGLIARLIEAVAYDPQLSRYSNAVLVFLPGIAEIRQVNDLLGGHPSF-NN 779
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
++I PLHS + S Q+ F PP G RKI+L+TNIAET +TI D+ VID+G+ KE
Sbjct: 780 KDWLIYPLHSTISSEDQQAAFLIPPRGVRKIVLATNIAETGVTIPDITCVIDTGKHKEMR 839
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L S++S+A+AKQR GRAGR Q G+C+HL+++ R +L D Q PE+ R+
Sbjct: 840 FDERRQLSRLTQSFISRANAKQRRGRAGRVQEGLCFHLFTKYRHDTLMTDQQTPEMLRLS 899
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++ K+ +IE+ L + LDPP S IR AI L ++ AL+ E++T LG ++
Sbjct: 900 LQDLVMRTKICKLG-DIEETLSQALDPPSSRNIRRAIDALIEVDALTPSEELTALGRQIA 958
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ A + C+D A+T+A + PF P K+RA A+ +
Sbjct: 959 KLPLDAHLGKLVLLATIFACVDVAITIAAILSSKSPFLTPFGA--KQRADIARL---AFK 1013
Query: 830 GGQSDQLAVIAAFECWKN--AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
G SD L A+ W+ E FC + F+S + + ++ QL + L++ GF
Sbjct: 1014 KGDSDLLTTYNAYRAWRAVCTTPGRSEIQFCHKNFLSPQNLGNIEDLKAQLLSSLVEAGF 1073
Query: 888 I---PED-------VSSCSHNA--RVPG----------IIHAVLMAGLYPMVARLRPPHK 925
I P++ S+ H A +VP +++V+ YP + +
Sbjct: 1074 IQLSPDERNNLKRYRSTTRHRAFVQVPPQYDIHTDNDIFVNSVIATAFYPKILT-----R 1128
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH-VRNCTVVGPL 984
G+ + + V L P S+N K T + Y I + + + ++V PL
Sbjct: 1129 EGKGWRNISNNQTVSLAPTSVN-----KGTKVAQFLSYYHIMQSSNKFYNAHSTSIVYPL 1183
Query: 985 PLLLL 989
P++L+
Sbjct: 1184 PMVLM 1188
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 98/150 (65%), Gaps = 20/150 (13%)
Query: 186 SKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRR 245
+ LP+S F+D I +T+D NQ+ +I GETGCGK+TQ+P F+LEH S+G+ CK+ CT+PRR
Sbjct: 528 ANLPVSGFRDEIMTTIDKNQITIICGETGCGKSTQIPSFILEHELSQGKACKVFCTEPRR 587
Query: 246 ISATSVAERISVERGE------NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
ISA S+A+R+S E GE + +GY IRLESK + +V+ T GV+LR+L S G
Sbjct: 588 ISAISLAQRVSEELGEGPKELGTMRSLVGYAIRLESKTSSQTRLVYATVGVVLRMLESAG 647
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHER 329
+ +TH+++DE+HER
Sbjct: 648 --------------GLPEVTHLVIDEVHER 663
>gi|328862737|gb|EGG11837.1| hypothetical protein MELLADRAFT_76432 [Melampsora larici-populina
98AG31]
Length = 1308
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 216/390 (55%), Gaps = 21/390 (5%)
Query: 514 IKKHMENALSDSMKQQLLDKYLATVNPELIDL----VLIEQLLRKICMDSEDGAILVFLP 569
++K+M L + + +D + V + DL LI ++ + S DG +LVFLP
Sbjct: 578 VRKYMHRELQEPLD---IDPHSGKVQRDSDDLEMPYALIALVVAWVLSKSTDGHVLVFLP 634
Query: 570 GWEDINKTRDRLLAN---PF----FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
GW++I ++ LL N P F D+S+F + LHS +P V Q+KVF P G R+II
Sbjct: 635 GWDEIKGVQNILLDNVQFPLLGLNFNDSSRFEVHVLHSAIPVVDQQKVFTPPSEGVRRII 694
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQA 682
LSTNIAET++TI DVV+V+D+G++KEK +DP ++S+L ++WV ++ QRAGRAGR +A
Sbjct: 695 LSTNIAETSVTIPDVVFVVDTGKIKEKRFDPERHLSSLVTAWVGTSNLNQRAGRAGRHRA 754
Query: 683 GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD-PNCNIEDFLQKTLDPPVSVT 741
G Y L S+ R +L E+KR + L + VK L+ PN ED L +T++PP
Sbjct: 755 GDYYGLLSRRRYEALNIHSTVEMKRTDLSNLVMHVKALNFPNMEAEDVLDQTIEPPERER 814
Query: 742 IRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASD 801
+ A+ LQ IGAL + +T LG L L V + K+L CL+PAL LA
Sbjct: 815 VSAAMSHLQTIGALDRFKDLTALGRVLLQLPVEAQIGKLLLLGSFFKCLEPALNLAAILT 874
Query: 802 YRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG--QEAW-FC 858
RDPF P P+ K A K A + +SD LA +AAF W + R Q A+ F
Sbjct: 875 NRDPFLSP--PSAKTEADRIKSSWAP-FAFRSDPLACLAAFTAWSQFQDRNETQRAYRFA 931
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
++ F+S + + ++ L + L + G +
Sbjct: 932 NENFLSKPTLGQISQVKTHLLSSLRRAGVL 961
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 158/282 (56%), Gaps = 29/282 (10%)
Query: 129 GEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRI--EKDANLRQIV---E 183
G +L Q+ TR R + K + + K E L+ R+ + + R +V E
Sbjct: 284 GSRLLVEQTLVRSNTR--RSNPSLSDKARQDALTAKSEVLSDRLGQYQTDDKRHVVALRE 341
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVCT 241
+R+ LP+++ ++ S + +N V ++ TG GKTTQVPQ +L+ + G C I+CT
Sbjct: 342 QRTALPVTAHASLVLSALATNPVTILMAATGSGKTTQVPQLILDSATMRGNGAKCNIICT 401
Query: 242 QPRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGV 300
QPRRI+A SVA+R++ ER E +G+++GY++R E+K SI+FCT GV LR
Sbjct: 402 QPRRIAAISVAQRVANERNEQLGESVGYQVRFEAKPPTPDGSILFCTTGVFLR------- 454
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML-----PSYPHLRLILM 355
RL+ + +TH++VDE+HERD +D +L +R +L P ++++LM
Sbjct: 455 -RLQNDMESADGAFLDPITHVVVDEVHERDIDTDLLLFCLRKVLKDRKEKGKPEIKVLLM 513
Query: 356 SATLDADRFSQYFGG------CPVIQVPGFTYPVKSFYLEDV 391
SAT+D F +YF PVI VPG ++PV+ YLE++
Sbjct: 514 SATVDPSLFEKYFADSKTEKLAPVISVPGRSFPVEKHYLEEL 555
>gi|393218466|gb|EJD03954.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 1353
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 205/365 (56%), Gaps = 16/365 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL-------LANPFFRDTSKFVI 595
I L+ + + +S+ G +LVFLPGWE+I + L L F D SKF +
Sbjct: 689 IPYALVGLTISHVLKNSDSGHVLVFLPGWEEIQSVQKLLTTGESSRLFGLDFGDPSKFSL 748
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
LHS +P +Q+ +F PP G R+IILSTNIAET++TI DVVYV+D+ ++KE YDP
Sbjct: 749 HVLHSSIPLAEQQVIFDPPPEGVRRIILSTNIAETSVTIPDVVYVVDTAKIKENRYDPER 808
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
++S+L S+WV K++ QRAGRAGR + G Y + SQ RA +L Q E+KR+ + + +
Sbjct: 809 HISSLVSAWVGKSNLNQRAGRAGRHRPGEYYGILSQSRADALHPHQTVEMKRMDLTNVVM 868
Query: 716 QVKLLD-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
VK LD P E+ L +T++PP + A+ L+ +GAL +K+T LG L L +
Sbjct: 869 HVKALDFPGMEAEEVLARTIEPPSVERVTAAMESLKIVGALDEGKKLTSLGRLLLQLPIE 928
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ +++ CLDPALTLA RDPF P P +K A A K +SD
Sbjct: 929 VQLGRLVLLGSFFKCLDPALTLAAIFSSRDPFLSP--PTMRKEAQAVKNSWCP-EDFRSD 985
Query: 835 QLAVIAAFECWKNAKQRGQ---EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
+A + AF+ W ++RG A FCS F+S + + + ++ L + L + G + D
Sbjct: 986 AIASLRAFDAWYEFERRGDIRGGAQFCSDNFLSKPTLMLAVKVKDHLLSSLAQTGIL--D 1043
Query: 892 VSSCS 896
+S+ S
Sbjct: 1044 ISNLS 1048
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 140/232 (60%), Gaps = 22/232 (9%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK-- 232
D + +I + R LP+ S + ++ N+V+++ TG GKTTQ+PQ +L+ +
Sbjct: 411 DPSHEKIRQTRQNLPVYSKAEDALRQIEENEVIILMAATGSGKTTQIPQLILDSYIDRQE 470
Query: 233 GETCKIVCTQPRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNG 289
G C I CTQPRR++A SVA+R++ ERGE +G+ +IGY++R ES ++ S+ +CT G
Sbjct: 471 GSRCNIFCTQPRRLAAISVAQRVAKERGEQVGEGGSIGYQVRFESSLPDENGSVTYCTIG 530
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
V LR R++ A + + +THI+VDE+HERD +D +L +++ ++
Sbjct: 531 VFLR--------RMQTALQRGHDRVLDNVTHIVVDEVHERDIDTDLLLVVLKRLIEHRRT 582
Query: 350 ----LRLILMSATLDADRFSQYF---GGCP--VIQVPGFTYPVKSFYLEDVL 392
L++ILMSAT+DA F YF G P V+++PG ++PV+ +L++ L
Sbjct: 583 KGNPLKVILMSATVDATLFRNYFSDANGTPARVVEIPGRSFPVQKHFLDEFL 634
>gi|367036887|ref|XP_003648824.1| hypothetical protein THITE_2106703 [Thielavia terrestris NRRL 8126]
gi|346996085|gb|AEO62488.1| hypothetical protein THITE_2106703 [Thielavia terrestris NRRL 8126]
Length = 1445
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 231/419 (55%), Gaps = 31/419 (7%)
Query: 543 IDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ L+ + +R I D + G IL+FLPG +IN+ + L A P ++PL
Sbjct: 874 INYDLLVETVRAIDADLSTTQKAGGILIFLPGVAEINRACNALRATPSLH------VLPL 927
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + + +QKKVF PPPG RK++++TN+AET+ITIDD+V V+DSGR+KE S+DP NN+
Sbjct: 928 HASLETREQKKVFAAPPPGKRKVVVATNVAETSITIDDIVAVVDSGRVKETSFDPTNNMR 987
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
L+ +W S+A+ KQR GRAGR QAG CY LY++ + + + PEI+R+P+E+LCL V+
Sbjct: 988 KLEETWASRAACKQRRGRAGRVQAGKCYKLYTRNLESQMAERPDPEIRRVPLEQLCLAVR 1047
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
+ +I FL + PP + + AI +L+ +GAL DE +T LG++L +
Sbjct: 1048 AMGIR-DISLFLSRAPTPPEATAVEGAITMLRRMGALDGDE-LTALGQQLAMIPADLRCG 1105
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLA 837
K++ + + CLD +T+A R PF +SP EK+ A A+ A G D L
Sbjct: 1106 KLMVYGAIFGCLDDCVTIAAILSTRSPF---LSPAEKREEAKQARMRFAR---GDGDLLT 1159
Query: 838 VIAAFECW------KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-IPE 890
+ A++ W + QR W C + F+S ++ + R Q T L + G P
Sbjct: 1160 DLRAYQEWDAMMSDRGVPQRRVRQW-CDENFLSFPALSDIASTRSQFYTSLSELGIRPPP 1218
Query: 891 DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
SS + ++ ++ A+ + P + R++ P K +F + GA V L P + +
Sbjct: 1219 PSSSRAPSSSSAPLLRALTASAFAPQICRIQFPDK---KFATSVSGA-VELDPEARTIR 1273
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 166/286 (58%), Gaps = 22/286 (7%)
Query: 170 SRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
+RIE A ++++ +R +LP + + TV NQV +ISGETG GK+TQ QF+L+ +
Sbjct: 610 ARIETPA-YKKMLSQRERLPAWQVRAEVVRTVTENQVTIISGETGSGKSTQSVQFILDDL 668
Query: 230 WSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
+S+G IV TQPRRISA +A+R++ ER +G +GY IR ES+ G ++ I F T
Sbjct: 669 YSRGLGNGANIVVTQPRRISALGLADRVAEERCTPVGHEVGYSIRGESRTGPNTKITFVT 728
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + G R+++ A DVS HI+VDE+HER +DF+L+I+RD+L
Sbjct: 729 TGVLLRRLQTSG-GRVEDVVASLA--DVS---HIVVDEVHERSLDTDFLLSIVRDVLYKR 782
Query: 348 PHLRLILMSATLDADRFSQYFGG------CPVIQVPGFTYPVKSFYLEDVLSI--LKSAE 399
L+LILMSATLDA F YF ++++ G TYPV+ +YL+DV+ +
Sbjct: 783 RDLKLILMSATLDAASFRDYFMADRQDVTVGLVEISGRTYPVQDYYLDDVIRMTGFSVGS 842
Query: 400 SNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELV 445
N D P+ E+ +++ I + +D+L+E V
Sbjct: 843 RNDFDDDGFSTPS-----GEQQADPINKTIQKLGTRINYDLLVETV 883
>gi|291231421|ref|XP_002735666.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 30-like
[Saccoglossus kowalevskii]
Length = 893
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 252/483 (52%), Gaps = 47/483 (9%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
++ +++ I + GAIL FLPGW+DI R+RL + I P+HS VP Q
Sbjct: 357 MVSRVIEYIDTNKPHGAILCFLPGWQDIVAVRNRL--QELWPSQDLHWIFPVHSSVPMSQ 414
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q+ +F++PP G RK++L+TNIAET+ITI+DVVYV++ G KE Y+ S L W+S
Sbjct: 415 QQAIFEKPPEGVRKVVLATNIAETSITINDVVYVVNVGNHKELRYNIETGTSCLDVHWIS 474
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
+A+ +QR GRAGRCQ G CYHL+++ + + DFQ+ E+ R+P+E+L +Q K+ P+ +
Sbjct: 475 RANVRQRKGRAGRCQPGECYHLFTENKLQDMDDFQLAEMLRVPLEQLIVQTKIHTPHTIV 534
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
+FL+K L+PP + A+ +LQD+ L DE +T LG+K+ ++ P ++K + ++ +
Sbjct: 535 AEFLEKALEPPSEDAVEKAVDLLQDLDILDDDENLTPLGKKISHITTDPRLAKAIVYSAI 594
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
C+DP LT++ + RDP+ + SL L +FE +
Sbjct: 595 FRCVDPILTISASLSSRDPY------------------MDSLERRSEVNLPSTLSFEEFV 636
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNML-LGMRKQLQTELIKNGFIPED------VSSCSHNA 899
+ R + + ++N L G+R+Q L G + + V C+ N+
Sbjct: 637 ISILRKM------FLLIDNCIVNFLNNGLRRQFSENLYDAGMVNFEKSGLMYVDGCNENS 690
Query: 900 RVPGIIHAVLMAGLYPMVARLRPPH------KNGRRFVETAGGAKVRLHPHSLNFKLSFK 953
+I VL A LYP + +R K + ++ LHP S+N S +
Sbjct: 691 DDQELIKGVLAAALYPNIVYVRRGEIINDKLKLNSVICKDLDNNRIILHPSSVN---SDE 747
Query: 954 KTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE-IAVAPAPDNED---DDEDDD 1009
K + Y T+ G +R+ ++V P+ L+ LA + + V P +E +D DD
Sbjct: 748 KKFPHRWLTYFTKTKS-SGTFIRDSSMVHPMVLICLAGKSLCVLPVRKSEAKYLEDSRDD 806
Query: 1010 MSD 1012
+S+
Sbjct: 807 VSE 809
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 140/229 (61%), Gaps = 47/229 (20%)
Query: 172 IEKDANL--RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL-EH 228
+E D +L +++ E +KLPI + + I S +++NQV+++ G+TGCGKTTQVPQ +L E+
Sbjct: 148 LENDESLSRKKMRESVAKLPILAMRSEIYSAIENNQVIVLEGDTGCGKTTQVPQIILDEY 207
Query: 229 IWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFC 286
I + +G C IV TQPRRISA S+AER+S ER E +G +GY++RLE++ K S++FC
Sbjct: 208 IRNGRGAHCNIVVTQPRRISAVSIAERVSDERAERVGQTVGYQVRLENRLPEKDGSVLFC 267
Query: 287 TNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS 346
T G+LL K+ + P+ ++ +TH+IVDE+HERD +DF+L +++D
Sbjct: 268 TVGILL-----------KKIQSNPS---LNGVTHVIVDEVHERDVNTDFLLILLKD---- 309
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
CP+I VPG YPVK ++LEDV ++
Sbjct: 310 ------------------------CPIISVPGLMYPVKEYFLEDVFRMV 334
>gi|194758212|ref|XP_001961356.1| GF13828 [Drosophila ananassae]
gi|190622654|gb|EDV38178.1| GF13828 [Drosophila ananassae]
Length = 1339
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 265/503 (52%), Gaps = 31/503 (6%)
Query: 500 QLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDS 559
Q+ EN+ E K E+ S + + A ++ + L+E LL I +
Sbjct: 601 QMQLSENKEEAETNYNKVCEDKYSQQTRNAM-----AMLSESDVSFELLESLLVHIKSKN 655
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
GAILVFLPGW I L ++ F ++S++ I+P HS +P Q+KVF++ P G
Sbjct: 656 IPGAILVFLPGWNLIFALMKFLQSSNTFGNSSQYRILPCHSQIPRDDQRKVFEQVPDGVT 715
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
KIILSTNIAET+ITIDD+V+V+D + + K + +NN+++ + W SK + +QR GRAGR
Sbjct: 716 KIILSTNIAETSITIDDIVFVVDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 775
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
+ G C+ L S+ R A+L + PE+ R P+ E+ L VKLL I FL K L+PP
Sbjct: 776 VRPGFCFTLCSRARYAALEENLTPEMFRTPLHEMALTVKLLRLGA-IHHFLSKALEPPPV 834
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC- 798
+ A ++L+++ L ++++T LG L L + P + KM+ + C D ++A
Sbjct: 835 DAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLVASMASY 894
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRG--QEA 855
+S + + F L I +++ A K +L G + SD +A+I A + W+ AK RG +EA
Sbjct: 895 SSTFSEVFALDIG--QRRLANHQK----ALSGRKCSDHVAMIVASQMWQRAKHRGEQEEA 948
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSH-NARVPG------IIHAV 908
FC + MN++ ++QL L + GF PE+ H +A PG I A+
Sbjct: 949 RFCDWKGLQMSTMNVMWDAKQQLLDLLQQAGF-PEECMVPYHVDAEAPGDDPQLDIALAL 1007
Query: 909 LMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITR 968
L GLYP + HK+ R+ + T A + LH S+N + T P V+ E R
Sbjct: 1008 LCLGLYPNIC----VHKDKRKVLTTESKAAL-LHKTSVNCS-NLAITFPYPFFVFGEKIR 1061
Query: 969 GDGGMHVRNCTVVGPLPLLLLAT 991
+ + ++V PL ++L +
Sbjct: 1062 TR-AVSCKQLSMVSPLQVMLFGS 1083
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/240 (50%), Positives = 158/240 (65%), Gaps = 22/240 (9%)
Query: 167 SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL 226
SL R DA RQ +E R KLPI++ + I S ++ N VV+I G TGCGKTTQ+ Q++L
Sbjct: 366 SLRERRLNDAEYRQFLEFRDKLPIAAMRSEILSAINENPVVIIRGNTGCGKTTQIAQYIL 425
Query: 227 EHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSI 283
+ S G+ I TQPRRISA SVAER++ ER E +GD +GY +R ES + + +I
Sbjct: 426 DDYISSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAI 485
Query: 284 VFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM 343
+FCT GVLLR L EA + ++HIIVDEIHERD SDF+L I+RDM
Sbjct: 486 LFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDFLLVILRDM 529
Query: 344 LPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL---SILKSAES 400
+ +YP L +ILMSAT+D FS+YFG CPV++VPG +PV+ F+LED+L S + SAES
Sbjct: 530 VDTYPDLHVILMSATIDTSLFSKYFGNCPVLEVPGRAFPVQQFFLEDILQMTSFVPSAES 589
>gi|242025160|ref|XP_002432994.1| ATP-dependent RNA helicase A, putative [Pediculus humanus corporis]
gi|212518503|gb|EEB20256.1| ATP-dependent RNA helicase A, putative [Pediculus humanus corporis]
Length = 1249
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 242/467 (51%), Gaps = 28/467 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A ++ + I LI +LL I + GA+L+FLPGW I L + F FV
Sbjct: 626 MALLSEKEICFELIVKLLEYIKSINIPGAVLIFLPGWNLIFALMKHLQQHTIF-GGYDFV 684
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P QK+VF PP K+IL+TNIAE++ITI+D+V+VIDS + K K + +
Sbjct: 685 ILPLHSQLPREDQKRVFHVYPPNITKVILATNIAESSITINDIVFVIDSCKAKMKIFTAH 744
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + GIC+HL S+ R L PE+ R P+ EL
Sbjct: 745 NNMTHYATVWASKTNLEQRKGRAGRVRPGICFHLCSKARYEKLDQHMTPEMFRTPLHELA 804
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L VKLL ++ FL K ++PP + A ++L+++ L ++++T LG LG L +
Sbjct: 805 LTVKLLRLG-SVGQFLSKAIEPPPIDAVIEAEVLLREMKCLDSNDELTPLGRILGKLPLE 863
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLP---ISPNEKKRATAAKFELASLYGG 831
P M KM+ L DC D T+A + TLP I EK+R + F + G
Sbjct: 864 PRMGKMVILGCLFDCGDALTTIAANTA-----TLPEVFIQTPEKRRLS---FSQKNFSGN 915
Query: 832 Q-SDQLAVIAAFECWKNAK--QRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK-NGF 887
+ SD +A + AF+ W+ K + E FC +S + + L + QL L GF
Sbjct: 916 RFSDHIATLNAFQTWEEVKMSENESEERFCEAKLLSHSTLRITLEAKNQLIQLLTAFTGF 975
Query: 888 IPEDVSSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHP 943
E + S +N P ++ A+L GLYP VA + +R V T G +H
Sbjct: 976 PEETLVSKVYNYHGPDPKLDVVIALLCLGLYPNVA-----YHQSKRKVLTTGNKVALIHK 1030
Query: 944 HSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
S+N + +++ P VY E R + + T+V P+ LLL
Sbjct: 1031 TSVNCS-NLEQSFPIPFFVYREKIRTK-VVSCKQMTMVTPIHLLLFG 1075
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 162/245 (66%), Gaps = 20/245 (8%)
Query: 156 MSKAEIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETG 214
+S EI++ +E S ++ + NL+++++ER +LP + I T++ N VVLI G TG
Sbjct: 346 ISLDEISLNLEQSYRHNLQTNENLQKMIKEREELPAFAINKEIMQTINDNAVVLIRGNTG 405
Query: 215 CGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
CGKTTQV QF+L+ G+ C ++ TQPRRISA SVA+R++ ER E +G ++GY +R
Sbjct: 406 CGKTTQVCQFILDDYIKAGQGAYCNVIVTQPRRISAVSVADRVAFERNETLGQSVGYSVR 465
Query: 273 LESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
ES + SI+FCT GVLL+ L S + ++HIIVDEIHERD
Sbjct: 466 FESCFPRPFGSILFCTVGVLLKKLES----------------GLRGISHIIVDEIHERDV 509
Query: 332 YSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+DF+L ++RDM+ +YP LR++LMSAT+D F+ YFG CP+I++PG ++PVK ++LED
Sbjct: 510 NTDFILVVLRDMIHTYPDLRIVLMSATIDTTLFNNYFGNCPIIEIPGCSFPVKKYFLEDC 569
Query: 392 LSILK 396
+ +LK
Sbjct: 570 IQMLK 574
>gi|157824886|gb|ABV82522.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (559), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157382866|gb|ABV48868.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDVPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 220 bits (560), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 167/251 (66%), Gaps = 23/251 (9%)
Query: 157 SKAEIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGC
Sbjct: 352 STDDLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGC 411
Query: 216 GKTTQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R
Sbjct: 412 GKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRF 471
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + + +I+FCT GVLLR L EA + ++HIIVDEIHERD
Sbjct: 472 ESVFPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVN 515
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SDF+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++
Sbjct: 516 SDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDII 575
Query: 393 SI---LKSAES 400
+ + SAES
Sbjct: 576 QMTDFVPSAES 586
>gi|402077519|gb|EJT72868.1| hypothetical protein GGTG_09720 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1499
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 222/396 (56%), Gaps = 28/396 (7%)
Query: 503 EQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE-- 560
E +PE+ + +K +M+ +++ Q +D+Y I+ LI QL+ +I D
Sbjct: 915 ENSTKPELLKTLKHYMKGT-RNTLSQ--MDEYQ-------IEFDLIVQLISRIATDPNYE 964
Query: 561 --DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
AILVFLPG +I + D LL + FF D +++ PLHS + + +Q+ F PPPG
Sbjct: 965 QFSKAILVFLPGLAEIRQLNDLLLGDRFFSDN--WLVYPLHSSIATEEQEAAFLVPPPGL 1022
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKI+L+TNIAET ITI DV VID+G+ +E +D +S L +++S+A+AKQR GRAG
Sbjct: 1023 RKIVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAG 1082
Query: 679 RCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
R Q G+C+H++++ R S + D Q PE+ R+ +++L ++VK+ IE+ L + LDPP
Sbjct: 1083 RVQEGLCFHMFTKYRHDSIMADQQTPEMLRLSLQDLAIRVKICKIG-GIEETLSEALDPP 1141
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
+ IR A+ L D+ AL+ E++T LG +L L + + K++ + CLD A+T+A
Sbjct: 1142 SAKNIRRAVDALVDVRALTQSEELTPLGNQLARLPLDVFLGKLILLGTIFKCLDMAITVA 1201
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN-----AKQRG 852
+ PF P ++ +A A+ S G SD L V A+ WK G
Sbjct: 1202 AILSAKSPFVAPF--GQRAQADNAR---QSFRCGDSDLLTVYNAYLSWKRVCLAATNNGG 1256
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
QE +C + F+S + + ++ QL L+ + F+
Sbjct: 1257 QEFQYCRKNFLSPQTLANIEDLKGQLLVSLVDSRFL 1292
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 196/356 (55%), Gaps = 51/356 (14%)
Query: 134 ANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKV---ESLTSRIEKDANLRQIVEERSKLPI 190
A+ + SD+ RGK V + E K+ +S T R + ++ R +LP+
Sbjct: 647 ADSAENSDQDRGKVV-------AAGPEYYQKIWCDKSSTPRFQT------MMRSRMQLPM 693
Query: 191 SSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATS 250
F+D + S VD QV+++ GETGCGK+TQVP FLLEH S+G+ CK+ C QPRRISA S
Sbjct: 694 WGFRDQVLSAVDQQQVIIVCGETGCGKSTQVPSFLLEHQLSQGKPCKVYCAQPRRISAVS 753
Query: 251 VAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
+A R+S E GE D +GY IRLE+ + + +V+ T G+++R+L
Sbjct: 754 LARRVSEELGEGRNDLGTPRSLVGYSIRLEANTSRETRLVYSTTGIIMRML--------- 804
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
E+SN D+ +TH+++DE+HER SDF+L +++ +L L+++LMSAT+DA+RF
Sbjct: 805 ESSN-----DLRDITHLVLDEVHERSIDSDFLLIVLKKLLVRRKDLKVVLMSATVDAERF 859
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSA--ESNHLDSASL--IVPNEDPE---- 416
SQY GG PV+ VPG T+PV+ YLED + + + N + L P+ +PE
Sbjct: 860 SQYLGGAPVLNVPGRTFPVRVSYLEDAVELTGYTVDQQNKVRMTDLDDDAPDVEPENSTK 919
Query: 417 ------LTEENKSTLDEAISLAWSNDEFDMLLELVS-LEGSPNVYNYQHTLTGLTP 465
L K T + + EFD++++L+S + PN + + P
Sbjct: 920 PELLKTLKHYMKGTRNTLSQMDEYQIEFDLIVQLISRIATDPNYEQFSKAILVFLP 975
>gi|157382874|gb|ABV48872.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157824876|gb|ABV82517.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157824882|gb|ABV82520.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|301105413|ref|XP_002901790.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262099128|gb|EEY57180.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 1364
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 254/503 (50%), Gaps = 43/503 (8%)
Query: 535 LATVNPELIDLVLIEQLLRKICM----------DSEDGAILVFLPGWEDINKTRDRLLAN 584
L ++P +++ LI+ LL I D + ++LVFLPG ++I D L +
Sbjct: 781 LERMDPSVVNYELIQALLEHITTETDLLSLSTSDKKSASVLVFLPGLQEITTLLDILGGS 840
Query: 585 PFFRDT---SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
R +F +PLHS + + +Q+++F R PG ++I +TNIAET++TIDDV VI
Sbjct: 841 RLLRHDPHGREFEFLPLHSSLSAQEQQRIF-RQCPGVIRVIAATNIAETSLTIDDVKVVI 899
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ--LRAASLPD 699
D+GR+K+ S+D + L WV++A+AKQRAGRAGR G C+ L+ Q R+ L +
Sbjct: 900 DTGRVKQMSHDAQRRTNVLDEIWVARANAKQRAGRAGRTSGGSCFRLFPQSVFRSVML-E 958
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIED----FLQKTLDPPVSVTIRNAIIVLQDIGAL 755
VPEI+R P+ LCLQ+K +D FL+ LDPP +I++A+ L +IGAL
Sbjct: 959 QPVPEIRRAPLTSLCLQIKTFGAGGEEKDGCGEFLRACLDPPDDASIQDALEELFEIGAL 1018
Query: 756 SL-DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNE 814
S DE +T+LG L L V + K+L L D A T A + + PF P
Sbjct: 1019 SRQDEALTKLGAHLARLPVDVKVGKLLLLGALFGVFDAASTCAAVLETKSPFVAPFGRQS 1078
Query: 815 KKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ-----EAWFCSQYFVSSGVMN 869
+ + F +A+ SD L + AFE W+ Q G+ E FC F+S +
Sbjct: 1079 EMKQARQTFAVAA-----SDLLTDVNAFEAWRYVVQHGKSSGVSEKSFCQSNFLSHRGLR 1133
Query: 870 MLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGI--IHAVLMAGLYPMVARLRPPHKNG 927
+ +++Q + + + GF+P V + I A+L AGL P + PP G
Sbjct: 1134 EVSKLKRQFRGLVAQLGFLPSSEKEQDERMSVQQLATISAILYAGLAPNLVHAEPPMAYG 1193
Query: 928 --RRFVETAGGAKVRLHPHSLNFKL-SFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPL 984
R + V +HP S+N+K+ +F+ ++ + Y + +++ ++V PL
Sbjct: 1194 PKRAVLRERNHGIVVMHPGSINYKVATFRASN---FLTY-AVKLHTSQVYLPASSLVLPL 1249
Query: 985 PLLLLATEIAVAPAPDNEDDDED 1007
+ L + A+ P P D+D
Sbjct: 1250 AVCLFS--YALEPLPQLRRKDKD 1270
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/245 (44%), Positives = 148/245 (60%), Gaps = 43/245 (17%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
E L R+ A R +++R LPI+SFK + + + V+LISGETGCGK+TQVPQFL
Sbjct: 487 EQLQKRMRSSA-YRSKLQQRESLPIASFKTQVVEMLADHDVILISGETGCGKSTQVPQFL 545
Query: 226 LEHIWSK---GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS 282
LE + G +IVCTQPRR++A S+AER+S E IRLE++ + +
Sbjct: 546 LEDLLLSESGGARGQIVCTQPRRLAAISLAERVSEE-----------LIRLETRMTRRTR 594
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII-- 340
++FCT G+LLR L Q S L + ++H+IVDE+HERD SD +LA++
Sbjct: 595 LLFCTTGILLRKL--QDPSTLGQ-----------EVSHVIVDEVHERDLQSDVLLAMLCQ 641
Query: 341 ----------RDMLPSYPHLRLILMSATLDADRFSQYFGG---CPVIQVPGFTYPVKSFY 387
R + P L++ILMSATL+A F +YFGG CP+I+VPG T+PV+ FY
Sbjct: 642 FLADGNAARRRKFGGTLPPLKVILMSATLNAASFQKYFGGAAVCPMIEVPGRTFPVEQFY 701
Query: 388 LEDVL 392
LEDVL
Sbjct: 702 LEDVL 706
>gi|157824892|gb|ABV82525.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157824888|gb|ABV82523.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157382854|gb|ABV48862.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|396498963|ref|XP_003845357.1| similar to ATP dependent RNA helicase [Leptosphaeria maculans JN3]
gi|312221938|emb|CBY01878.1| similar to ATP dependent RNA helicase [Leptosphaeria maculans JN3]
Length = 1541
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 251/487 (51%), Gaps = 50/487 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L+T + ID LI +L+ + DS AILVFLPG +I + + L +P F
Sbjct: 985 LSTYDEYAIDFDLIVRLIETVAFDSRLVQFSKAILVFLPGIAEIRQLNEMLTGHPSF--D 1042
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ + I PLHS + S Q+ F PPP RKI+L+TNIAET +TI D+ VID+G+ KE
Sbjct: 1043 ANWYIYPLHSTISSEDQQAAFYIPPPQIRKIVLATNIAETGVTIPDITCVIDTGKHKEMR 1102
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L S++SKA+AKQR GRAGR Q G+CYHL+++ R +L + Q PE+ R+
Sbjct: 1103 FDERRQLSRLTQSFISKANAKQRRGRAGRVQEGLCYHLFTKYRHDTLMAEQQTPEMLRLS 1162
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++ K+ +IE L + LDPP S IR +I L ++ AL+ E++T LG ++
Sbjct: 1163 LQDLVMRTKICKLG-DIESTLAQALDPPSSKNIRRSIDALIEVDALTPGEELTPLGRQIA 1221
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ A + C+D A T+A + PF P ++RA A+ +
Sbjct: 1222 KLPLDAHLGKLVILASTLACVDVATTIAAMLSSKSPFLTPF--GARQRADIARL---AFK 1276
Query: 830 GGQSDQLAVIAAFECWK---NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
G SD L + A++ W+ R E FC Q F+S+ + + ++ QL + L++ G
Sbjct: 1277 KGDSDLLTMYNAYKAWRVVCTTPGRS-ETHFCHQNFLSAQNLGNIEDLKAQLLSSLVEAG 1335
Query: 887 FI---PED-------VSSCSHN--ARVPG----------IIHAVLMAGLYPMVARLRPPH 924
F+ P++ S+ SH VP ++++V+ YP +
Sbjct: 1336 FLQLSPDERRRLSRYRSTTSHRMFVEVPARYDINSENDFLVNSVIATAFYPKLL-----T 1390
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH-VRNCTVVGP 983
+ GR + + V L P S+N K + Y I + + + +V P
Sbjct: 1391 REGRGWRNISNNQTVSLAPTSVN-----KGCATASFLSYYHIMQSSNKYYNAHSTSVTYP 1445
Query: 984 LPLLLLA 990
LPL+L+A
Sbjct: 1446 LPLVLMA 1452
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/261 (41%), Positives = 161/261 (61%), Gaps = 21/261 (8%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
++ +Q++ R LP+ F+ I ST+D QV +I GETGCGK+TQ+P F+LEH S+G
Sbjct: 730 SSYQQMLVGRMNLPVFGFRGAILSTIDRAQVTIICGETGCGKSTQIPSFILEHELSQGRL 789
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNG 289
CK+ CT+PRRISA S+A+R+S E GE D +GY IRLESK + +V+ T G
Sbjct: 790 CKVYCTEPRRISAISLAQRVSEELGEASRDLGSMRSLVGYAIRLESKTSSQTRLVYATVG 849
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
V+LR+L S G D+ +TH+I+DE+HER +DF+L I+R ++ P
Sbjct: 850 VVLRMLESTG--------------DLREVTHLIIDEVHERSIDTDFLLVILRSLMERRPE 895
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
L+++LMSAT+DA RFS Y P++ VPG T+PV++ YLED + + S+ S
Sbjct: 896 LKVVLMSATVDAARFSSYLNNAPILTVPGRTFPVQTRYLEDAIELTNYVASSGATQNSST 955
Query: 410 VPNEDPELTEENKSTLDEAIS 430
ED E+ + +KS + + +S
Sbjct: 956 SDVEDDEI-KTDKSGIPQKLS 975
>gi|157824878|gb|ABV82518.1| maleless [Drosophila melanogaster]
gi|157824880|gb|ABV82519.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157824890|gb|ABV82524.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI---LKSAES 400
ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ + + SAES
Sbjct: 536 ILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAES 586
>gi|157824884|gb|ABV82521.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|260828967|ref|XP_002609434.1| hypothetical protein BRAFLDRAFT_124637 [Branchiostoma floridae]
gi|229294790|gb|EEN65444.1| hypothetical protein BRAFLDRAFT_124637 [Branchiostoma floridae]
Length = 1237
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 158/494 (31%), Positives = 254/494 (51%), Gaps = 28/494 (5%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N SD K+ L + ++ + LI LL+ I GAIL+FLPGW I
Sbjct: 578 NEYSDQTKRSL-----SMLSEREMSFELIVVLLQYIRSLEVPGAILIFLPGWNLIFALLR 632
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L +P F + K+ ++PLHS +P Q +VF P G K+ILSTNIAET+ITI+DVVY
Sbjct: 633 YLQEHPEFGASGKYQLLPLHSQIPREDQHRVFLSVPSGITKVILSTNIAETSITINDVVY 692
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VIDS + K K + +NN++ + W SK + +QR GRAGR + G C+HL S+ R L
Sbjct: 693 VIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLET 752
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PEI R P+ EL L +KLL I FL + ++PP + A +L+++ AL ++
Sbjct: 753 HTTPEIFRTPLHELSLSIKLLRLGA-IGPFLARAIEPPPLDAVIEAEALLREMDALDSND 811
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRAT 819
++T LG+ L L + P + KM+ + C D +A ++ + +P+ +P+ E++R
Sbjct: 812 ELTPLGKILARLPIDPRLGKMVIMGCIFSCGDAMAAIASSTCFPEPWEVPV---ERRRLG 868
Query: 820 AAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRK 876
S G + SD +A++ A++ W+ A+ G+ E FC + ++ + M +
Sbjct: 869 WVH---KSFAGSRCSDHVAMLMAYQGWEEARSYGEDSEMNFCQRKSLNMATLRMTYEAKN 925
Query: 877 QLQ-----TELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
QL+ E + +P ++++ +I ++L GLYP V HK R+ +
Sbjct: 926 QLKDILQMAEFPEECLLPHHFDHTGPDSKLDMVI-SLLTMGLYPNVCF----HKEKRKLL 980
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
T G A + +H S+N + ++T P V+ E R + + T+V P+ LLL +
Sbjct: 981 TTEGRAAL-IHKSSVNCS-NREQTFPSPFFVFGEKIRTR-AVSAKQMTMVSPVQLLLFGS 1037
Query: 992 EIAVAPAPDNEDDD 1005
D + DD
Sbjct: 1038 RTVTTKEGDIKLDD 1051
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 155/233 (66%), Gaps = 19/233 (8%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
+ L + +D L++++++R LPI D + + + +N VV+I GETGCGKTTQVPQ+
Sbjct: 326 LNQLQDQRNQDQTLQKMLQDRQALPIWESVDHVMNAIVNNSVVIIKGETGCGKTTQVPQY 385
Query: 225 LLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HS 281
+L+ + KG+ C I+ TQPRRISA SVAER++ ERGE++G + GY +R ++ + +
Sbjct: 386 ILDDMIMKGKGAECNIIVTQPRRISAVSVAERVAQERGEDLGLSTGYSVRFDTVFPRPYG 445
Query: 282 SIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR 341
I+FCT GVLLR + + + L+H+IVDEIHERD SDF+L +++
Sbjct: 446 GILFCTVGVLLRKM----------------EGGMRGLSHLIVDEIHERDLNSDFLLVVLQ 489
Query: 342 DMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
M+ +YP +R+ILMSAT+D FS+YFG CPV+ V G T+PV+ ++LED + +
Sbjct: 490 GMVRAYPDMRIILMSATIDTSLFSEYFGNCPVVDVYGRTHPVQQYFLEDCIQM 542
>gi|403415165|emb|CCM01865.1| predicted protein [Fibroporia radiculosa]
Length = 1276
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 207/755 (27%), Positives = 337/755 (44%), Gaps = 118/755 (15%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET---C 236
++ + R LPI + + I + N VV+I GETG GKTTQVPQFL E + E+
Sbjct: 436 EVQKARILLPIVAEEQPIMEAILLNNVVIICGETGSGKTTQVPQFLYEAGFGSLESDNPG 495
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
I TQPRR++A S+A R++ E + Y+IR ++ +SI F T+GVLLR L
Sbjct: 496 MIGITQPRRVAAISMAARVAHELSLP-PSRVSYQIRYDATVAPTTSIKFMTDGVLLRELA 554
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
+ + ++ + +I+DE HER +D ++ ++ ++
Sbjct: 555 TDFL--------------LTKYSVVIIDEAHERSMNTDILIGVLSRVI------------ 588
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPE 416
L D + + GG P++ + L + AE+ L S+ P
Sbjct: 589 -RLREDMWRKDQGGV---------KPLRLVIMSATLRVSDFAENKTLFSSP-------PP 631
Query: 417 LTEENKSTLDEAISLAWSN-DEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRV 475
+ N +++ +S D + E + L L+ L G+ +
Sbjct: 632 II--NVPARQHPVTIHFSRRTSSDYVTEAIK-----KASKIHARLPPGGILIFLTGQNEI 684
Query: 476 GDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYL 535
VC +L+A+ GR AL+ + + ++I++ + + +Q +
Sbjct: 685 TGVCR--------KLEARYGRKALEAKRKMRRAAQKRLIER-ADAEDEATARQATVAPVQ 735
Query: 536 ATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDIN-KTRDRLLANPFFRDTSKFV 594
+ PE IDL Q + +D + V P D + + D L +
Sbjct: 736 VDIEPEDIDLGATGQDPADLALDIDGDVTTVEDPEALDTDAELDDEELGIDSEETDTPMH 795
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PL++++PS +Q +VF+ PPPG R ++++TN+AET++TI D+ YV+D GR KE+ YD
Sbjct: 796 IVPLYALLPSEKQTQVFQLPPPGTRLVVVATNVAETSLTIPDIRYVVDCGRAKERRYDVV 855
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEEL 713
N + Q SW+SKASA QRAGRAGR G CY LYS L F PEI R+PIE +
Sbjct: 856 NGIQAFQVSWISKASAAQRAGRAGRTGPGHCYRLYSSALYEQYFDQFSQPEILRVPIEGV 915
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS--------LDEKVTELG 765
LQ+K ++ + + +F T PP ++ A +L +GAL L +T++G
Sbjct: 916 VLQMKSMNIDAVV-NFPFPT--PPDRTSLSKAETILSHLGALKSKSSASIVLGGSITDIG 972
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPF------------------T 807
+ + + P S+ML CL +T+ A DPF
Sbjct: 973 KAMALFPLSPRYSRMLVSGRQHGCLPYVVTIVSALSVGDPFLREEALQADEVESDEDENA 1032
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQ---------------LAVIAAFECWKNAKQRG 852
P +E +A A+ + Y QS Q L+V+ A+E Q
Sbjct: 1033 PPQLSSEAGKAKEARRQRRRAY-FQSQQIHAYLGNSTSDVMRILSVVGAYEYAGGGHQ-- 1089
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
FCS++FV M + +R Q+ + +++ F
Sbjct: 1090 ----FCSEHFVRPKAMEEIHKLRAQI-SNIVQANF 1119
>gi|157382868|gb|ABV48869.1| maleless [Drosophila melanogaster]
gi|157382870|gb|ABV48870.1| maleless [Drosophila melanogaster]
gi|157382876|gb|ABV48873.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|398396714|ref|XP_003851815.1| hypothetical protein MYCGRDRAFT_73205 [Zymoseptoria tritici IPO323]
gi|339471695|gb|EGP86791.1| hypothetical protein MYCGRDRAFT_73205 [Zymoseptoria tritici IPO323]
Length = 1433
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 165/510 (32%), Positives = 256/510 (50%), Gaps = 51/510 (10%)
Query: 519 ENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSE----DGAILVF 567
E+A Q L+ Y LAT + ID LI +L+ KI ++ AILVF
Sbjct: 860 EDAQEKGTSDQQLNGYSKKTRNTLATYDEYRIDYSLIVKLIEKIGHHAQYQDYSKAILVF 919
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
LPG +I + D L +P F + + PLHS S Q+ F+ PPPG RKI+L+TNI
Sbjct: 920 LPGIAEIRQVNDMLCGHPRF--AKGWRVFPLHSTFSSEDQQAAFEIPPPGIRKIVLATNI 977
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AET ITI DV VID+G+ KE +D +S L S++++A+AKQR GRAGR Q G+C+H
Sbjct: 978 AETGITIPDVTCVIDTGKHKEMRFDERRQMSRLIQSFIARANAKQRRGRAGRVQQGLCFH 1037
Query: 688 LYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAI 746
L+++ R + D Q PE+ R+ +++L ++VK+ +IE L + LDPP S IR AI
Sbjct: 1038 LFTKYRHDHIMVDAQTPEMLRLSLQDLVMRVKICKLG-DIEHALSQALDPPSSRNIRRAI 1096
Query: 747 IVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPF 806
L ++GAL+ E +T LG +L L + + K++ CLD ALT A + PF
Sbjct: 1097 DALVEVGALTSGEDLTPLGNQLAKLPLDAQLGKLILLGSNFGCLDFALTAAATLSSKTPF 1156
Query: 807 TLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN--AKQRGQEAWFCSQYFVS 864
P+ ++KK+A + G SD L A+ W+ E FC++ F+S
Sbjct: 1157 LNPM--HQKKQADTVRL---GFKRGDSDLLTAYNAYTTWRKICITPHMSEFSFCNKNFLS 1211
Query: 865 SGVMNMLLGMRKQLQTELIKNGFI---PEDVSSCS---HNARVPGII------------- 905
S + + ++ QL + LI GF+ P++ ++ + HN R +
Sbjct: 1212 SQNLGNIEDLKAQLLSSLIDAGFVHLGPDERTALNRMRHNTRNRNFVMLPPQYTKSDEND 1271
Query: 906 ---HAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMV 962
+V+ YP + + ++G+ + + + LHP S+N K S D L
Sbjct: 1272 VLASSVVAWSFYPKIVK-----QDGKGWRNISNNQSLGLHPTSVN-KTSLNP-DIKFLSF 1324
Query: 963 YDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
Y + + + + V +PLL++ E
Sbjct: 1325 YSIMQSSSRFTNAQETSPVAEIPLLMMCGE 1354
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 183/306 (59%), Gaps = 24/306 (7%)
Query: 132 LDANQSRKSDKTRGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPI 190
+ N R+ D T G + + M + E+ +++ + +R ++++ R LP+
Sbjct: 585 FNVNTRRRLDGTSGSSTPVKSGTRRMQQPEVIEELQQMWARKTSTPAYQRMLVGRKNLPM 644
Query: 191 SSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATS 250
F++ T+ +QV ++ GETGCGK+TQ+P F+LE+ + G CKI CT+PRRISA S
Sbjct: 645 YHFRNAALDTIQRHQVTILCGETGCGKSTQLPAFILENELANGRPCKIYCTEPRRISAIS 704
Query: 251 VAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
+A+R+S E GEN GD +GY IRLES+ + +V+ T G++LR+L
Sbjct: 705 LAQRVSEEMGENKGDVGTFRSLVGYAIRLESQTTAQTRLVYATVGIVLRML--------- 755
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRF 364
E SN ++ +TH+I+DE+HER +DF+L ++R ++ P L+++LMSAT++A RF
Sbjct: 756 ENSN-----GLNDITHLILDEVHERSIDTDFLLIVLRSLMLKRPDLKVVLMSATVNAQRF 810
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKST 424
S+Y G P+I VPG T+PV++ +LED + + + +N D+ + V ++ E + K T
Sbjct: 811 SEYLDGAPIIDVPGRTFPVEAKFLEDAIEL--TGHTNE-DATTAAVDEDNNEEDAQEKGT 867
Query: 425 LDEAIS 430
D+ ++
Sbjct: 868 SDQQLN 873
>gi|332030651|gb|EGI70339.1| Dosage compensation regulator [Acromyrmex echinatior]
Length = 1202
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 234/456 (51%), Gaps = 20/456 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
I LIE LL I GA+L+FLPGW I L + F +S ++IIPLHS +
Sbjct: 589 ISFELIEALLMYIKRQDIPGAVLIFLPGWNLIFALMKHLQQHSLFGGSS-YLIIPLHSQL 647
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P Q+KVF P KIILSTNIAET+ITI+DVVYVIDS + K K + +NN++ +
Sbjct: 648 PREDQRKVFDPVPSFVTKIILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYAT 707
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL L +KLL
Sbjct: 708 VWASKTNLEQRKGRAGRVRPGFCFHLCSKARFNKMDEHMTPEMFRTPLHELALSIKLLRL 767
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
NI FL K ++PP + A +VL+++ L ++++T LG+ L L + P + KM+
Sbjct: 768 G-NIGQFLSKAIEPPPIDAVIEAEVVLREMKCLDKNDELTPLGKILARLPIEPRLGKMMI 826
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
+ D AL+ A+ P + P+ K+ K+ + + SD +A+ AF
Sbjct: 827 LGCMFRVGD-ALSTMAANSTTFPEVYNMGPDVKRLTAQQKWFAGARF---SDHVAMFHAF 882
Query: 843 ECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNAR 900
+ W+ A+ G+ E FC +S + + + QLQ L GF E + N +
Sbjct: 883 QAWEEARTGGEWAEQTFCDSKSLSLPTLRITWEAKNQLQALLQSAGFPEETLCPMPLNYQ 942
Query: 901 VPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKT 955
I A+L GLYP V HK R+ + T A + +H S+N +F++
Sbjct: 943 AGADPRLDTITALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVNCS-NFEQN 996
Query: 956 DDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
P V+ E R + + T+V P+ LLL +
Sbjct: 997 FPFPFFVFGEKIRTR-AVSCKQMTMVSPIHLLLFGS 1031
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 166/255 (65%), Gaps = 25/255 (9%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
++++D+NL+ ++ERS LP+ + K I + ++ N +++I G TGCGKTTQV QF+L+
Sbjct: 324 KLQQDSNLQASIKERSSLPVFNKKSEIMNAINENPIIIIRGNTGCGKTTQVCQFILDDYI 383
Query: 231 SKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+ G+ C IV TQPRRISA SVA+R++ ER E +G +IGY +R ES + ++SI+FCT
Sbjct: 384 ASGQGAYCSIVVTQPRRISAVSVADRVAAERCEALGQSIGYSVRFESYLPRPYASIMFCT 443
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+ Y
Sbjct: 444 IGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHLY 487
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK------SAESN 401
P LR+ILMSAT+D FS+YF CPV+++PG YPV+ ++LED + + S +
Sbjct: 488 PDLRIILMSATIDTTLFSEYFNKCPVVEIPGRAYPVQQYFLEDCIQLTNFFPPTSSGKRK 547
Query: 402 HLDSASLIVPNEDPE 416
++ L +P+ +PE
Sbjct: 548 SKEADDLPIPDAEPE 562
>gi|157382860|gb|ABV48865.1| maleless [Drosophila melanogaster]
gi|157382864|gb|ABV48867.1| maleless [Drosophila melanogaster]
gi|157382878|gb|ABV48874.1| maleless [Drosophila melanogaster]
gi|384875315|gb|AFI26242.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (559), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|17136342|ref|NP_476641.1| maleless, isoform A [Drosophila melanogaster]
gi|76803804|sp|P24785.2|MLE_DROME RecName: Full=Dosage compensation regulator; AltName:
Full=ATP-dependent RNA helicase mle; AltName:
Full=Protein male-less; AltName: Full=Protein maleless;
AltName: Full=Protein no action potential
gi|7302201|gb|AAF57297.1| maleless, isoform A [Drosophila melanogaster]
Length = 1293
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (559), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|432913230|ref|XP_004078970.1| PREDICTED: ATP-dependent RNA helicase A-like [Oryzias latipes]
Length = 1224
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 234/451 (51%), Gaps = 22/451 (4%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
L+E LL+ I GA+LVFLPGW I + L NP F ++++ I+PLHS VP +
Sbjct: 647 LVEALLKYIETLKVSGAVLVFLPGWNLIFSMQRHLETNPHF-GSNRYRILPLHSQVPREE 705
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q++VF P K+ILSTNIAET+ITI+DVVYVIDS + K K + +NN++ + W S
Sbjct: 706 QRRVFDPVPDDVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWAS 765
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
K + +QR GRAGR + G C+H+ S+ R L PEI R P+ E+ L +KLL +I
Sbjct: 766 KTNLEQRKGRAGRVRPGFCFHMCSRARFDKLETHMTPEIFRTPLHEVALSIKLLRLG-SI 824
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL K ++PP + A L+++ AL ++++T LG L L + P + KM+ +
Sbjct: 825 GHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILARLPIEPRLGKMMIMGCI 884
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
D T++ AS + +PF IS ++ F + SD +A++A F+ W
Sbjct: 885 FHVGDAVCTISAASCFPEPF---ISDGKRLGFVHRNFSGSRF----SDHVALLAVFQAWD 937
Query: 847 NAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP-- 902
+ + G++A FC ++ + M + QL+ L+ +GF E + N P
Sbjct: 938 DVRVNGEDAEIRFCEHKRLNMSTLRMTWEAKVQLKDILVNSGFPEECLMKQMFNTIEPDN 997
Query: 903 --GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD-DCP 959
++ ++L G YP V HK R+ + T G + +H S+N S P
Sbjct: 998 NLDLVISLLTFGSYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNCPFSSHDIKYPSP 1052
Query: 960 LMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
V+ E R + + T+V PL LLL A
Sbjct: 1053 FFVFSEKIRTR-AISAKGMTLVSPLQLLLFA 1082
Score = 223 bits (567), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 163/247 (65%), Gaps = 22/247 (8%)
Query: 151 FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS 210
FC P+ ++ L ++E D +L++I+ ER +LP+ F+D I ++SN VV+I
Sbjct: 366 FCTPEQISEDLR---NELMYQLEHDDSLQKILAERDQLPVKQFEDEIMGALESNPVVIIR 422
Query: 211 GETGCGKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIG 268
G TGCGKTTQVPQ++L+H G C IV TQPRRISA SVAER++ ER E++G + G
Sbjct: 423 GATGCGKTTQVPQYILDHFIKGGRASDCNIVVTQPRRISAVSVAERVAYERAEDLGKSCG 482
Query: 269 YKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
Y +R ES + H+SI+FCT GVLLR L EA + ++H+IVDEIH
Sbjct: 483 YSVRFESVLPRPHASIMFCTVGVLLRKL---------EAG-------IRGISHVIVDEIH 526
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ERD +DF++ ++RD++ ++P +R++LMSAT+D F +YF CP+I+V G T+PV+ ++
Sbjct: 527 ERDINTDFLMVVLRDVVQTFPDVRILLMSATIDTSMFREYFFNCPIIEVFGRTFPVQEYF 586
Query: 388 LEDVLSI 394
LED + +
Sbjct: 587 LEDCIQM 593
>gi|157382880|gb|ABV48875.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157382872|gb|ABV48871.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (559), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|410923739|ref|XP_003975339.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like [Takifugu
rubripes]
Length = 949
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 180/307 (58%), Gaps = 6/307 (1%)
Query: 544 DLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVP 603
DL L+ ++ I E GA+L FLPGW+DI +++L F S+ +I+PLHS +
Sbjct: 564 DLDLVADVIEHIDKRGEPGAVLCFLPGWQDIKAVQEKLEKRRHFSSGSQ-MILPLHSSLS 622
Query: 604 SVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 663
Q+ VF+RP G RKI+L+TNIAET++TIDD+V+V+D+G KE++YDP VS L +
Sbjct: 623 VADQQAVFQRPQVGQRKIVLTTNIAETSVTIDDIVHVVDTGTHKEQNYDPLTKVSCLDTV 682
Query: 664 WVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 723
W+S+++ QR GRAGRCQ G YHL+ Q + S+ F VPEI R P+E L +Q K+ PN
Sbjct: 683 WISRSNVTQRKGRAGRCQPGQSYHLFPQKKLESMSQFPVPEILRTPLESLVVQAKIHSPN 742
Query: 724 CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFF 783
DFL + LD P ++ A+ LQDIG L E +T LGE++ C+ P + K+L
Sbjct: 743 LKAVDFLSQVLDSPDREAVKAAVQNLQDIGVLDKTETLTPLGERVACMPCDPRLGKVLVL 802
Query: 784 AILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFE 843
+ + C+ P + +A A RDPF + + RA K EL + + + L +
Sbjct: 803 SAMFRCVLPMMCVA-ACLTRDPFHNSL----QNRAEINKVELCNERSNEEELLKAVLLAG 857
Query: 844 CWKNAKQ 850
+ N Q
Sbjct: 858 LYPNLIQ 864
Score = 189 bits (481), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 143/212 (67%), Gaps = 20/212 (9%)
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW---SKGETCKIVCTQP 243
+LP+ + + + S V+S++VV+I+GETGCGKTT++P+FLLE W KG C ++ TQP
Sbjct: 346 ELPVDAHRQRVVSAVESSRVVVIAGETGCGKTTRIPRFLLEE-WVRGGKGAECNVLVTQP 404
Query: 244 RRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS--SIVFCTNGVLLRLLVSQGVS 301
RRISA SVA R++ E G + ++GY++RLES+ S +++F T GVLLR L S
Sbjct: 405 RRISAVSVAHRVAQEMGPALKHSVGYQVRLESRPPDQSGGALLFLTVGVLLRKLQSN--- 461
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
+ ++H++VDE+HERD +D +LA++R L P LR++LMSAT D
Sbjct: 462 -----------PSLKGISHVVVDEVHERDINTDLLLALLRSSLEENPDLRVVLMSATGDK 510
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
R +QYFGGCPVI+VPGF +PV+ YLEDVL+
Sbjct: 511 QRLAQYFGGCPVIKVPGFMHPVRDLYLEDVLT 542
>gi|395334922|gb|EJF67298.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1331
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 248/487 (50%), Gaps = 47/487 (9%)
Query: 536 ATVNPELIDLVLIEQLLRKICMDSED-GAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
A + E D LI + I ++ G IL+FL G ++I + DRL P SK
Sbjct: 792 AIMRSESFDYDLIAATVNHIVGTAKKRGGILIFLSGVQEIRQCMDRLRTVP----NSK-- 845
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLH+ + + +Q++VF P KII+STN+AET++TIDDV+YVID G++KE YD
Sbjct: 846 ILPLHANLTNDEQRRVFASTPEW--KIIVSTNVAETSVTIDDVIYVIDGGKVKETHYDAE 903
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
++ L WV++A+AKQR GRAGR Q GICY LY++ + + F +PEIKR+P+E +
Sbjct: 904 AGLTRLTQQWVTRAAAKQRRGRAGRTQPGICYKLYTRAQEKRMAPFPIPEIKRVPLESIS 963
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +K++ + +++ FL + +DPP + A+ VL+++ A+ D ++T LG + L +
Sbjct: 964 LTLKVV--HNDVKTFLSRAIDPPEIAAVDKALEVLEELAAIGSDGELTALGRHMAILPMD 1021
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ KML + CL P LT+A + F P+ E+ + A+F SD
Sbjct: 1022 LRLGKMLILGTVFRCLGPVLTVAACLSSKPLFLSPMDKREEAKQARARFAT-----DNSD 1076
Query: 835 QLAVIAAFECWKNAKQRGQEAW----FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
L + A+E N + +G+ FC Q F+S + + +R+ L GF+PE
Sbjct: 1077 LLTDVNAYEECVNLRNKGESPGIIRVFCEQNFISISTIRDITSLRQDFMFSLSTLGFVPE 1136
Query: 891 DV----SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGG---------- 936
+ + N+ ++ AV++ G + VAR+ P K+ +F G
Sbjct: 1137 QSKPKDEALNTNSTNVNLVKAVILGGFWSRVARVHLP-KSAIKFGRVQAGTIQRENTAKE 1195
Query: 937 --------AKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
+V LHP S+ F S K+ P + Y + + + +R+ T V LLL
Sbjct: 1196 FKMYDLKEGRVFLHPASVLFNASAWKS---PFLTYFQ-KQMTSKVFLRDATEVPIYALLL 1251
Query: 989 LATEIAV 995
I V
Sbjct: 1252 FGGPIMV 1258
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 148/235 (62%), Gaps = 18/235 (7%)
Query: 164 KVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQ 223
+V+ ++ + A +++ R +LP + + + +N+ V++ GETGCGKTTQ+PQ
Sbjct: 536 RVKQEYEQLVRQAEYAKMLTTRERLPAFASRRQFLDILKANRCVVVVGETGCGKTTQLPQ 595
Query: 224 FLLEHIWSKGETCK--IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS 281
F+L+ + + G+ K I+ TQPRR+SA VA R+S ER E+ ++GY IR ESK G H+
Sbjct: 596 FVLDELIATGQGAKASIIVTQPRRLSAIGVAARVSAERLED--GSVGYAIRGESKQGSHT 653
Query: 282 SIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR 341
I+FCT GV+LR L S D + +TH++VDE+HER DF+L +R
Sbjct: 654 KILFCTTGVVLRRLGS--------------GDKLDDVTHVVVDEVHERSVDGDFLLLELR 699
Query: 342 DMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
++L ++P L++ILMSAT++ + F +YF P++ +PGFT+PV+ YLED L+
Sbjct: 700 ELLKTHPTLKVILMSATINHEVFVKYFHNAPLLTIPGFTHPVEDKYLEDFFPQLE 754
>gi|157382856|gb|ABV48863.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLLHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 165/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+Y G CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYLGVCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157382852|gb|ABV48861.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDLIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157906|gb|AAC41573.1| maleless protein [Drosophila melanogaster]
Length = 1293
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|367030701|ref|XP_003664634.1| hypothetical protein MYCTH_2307634 [Myceliophthora thermophila ATCC
42464]
gi|347011904|gb|AEO59389.1| hypothetical protein MYCTH_2307634 [Myceliophthora thermophila ATCC
42464]
Length = 1490
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 161/496 (32%), Positives = 243/496 (48%), Gaps = 56/496 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ I+ LI QL+ +I +D E AILVFLPG +I D LL + F
Sbjct: 915 LAQMDEYRIEYDLIVQLISRIAVDPEYAPYSKAILVFLPGIAEIRTLNDMLLGDRAF--A 972
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
S +++ P+HS + S +Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 973 SNWLVYPMHSSIASEEQEAAFLVPPPGMRKIVLATNIAETGITIPDVTCVIDTGKHREMH 1032
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L S++S+A+AKQR GRAGR Q G+C+HL+++ R L D Q PE+ R+
Sbjct: 1033 FDERRQLSRLVDSFISRANAKQRRGRAGRVQEGLCFHLFTKYRHDRLMNDQQTPEMLRLS 1092
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS-LDEKVTELGEKL 768
+++L ++VK+ IE+ L + LDPP + IR AI L D+ AL+ E++T LG +L
Sbjct: 1093 LQDLAIRVKICKMG-GIEETLSQALDPPSAKNIRRAIDALVDVRALTPTTEELTPLGLQL 1151
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L + + K++ + CLD A+T+A + PF P + + F
Sbjct: 1152 ARLPLDVFLGKLILLGAVFKCLDMAITVAAILSSKSPFVAPFGQRNQADSIRRGFR---- 1207
Query: 829 YGGQSDQLAVIAAFECWKN----AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L V A+ WK A G E FC + F+S + + ++ QL +
Sbjct: 1208 -KGDSDLLTVYNAYTAWKRVCQAATSGGAEFQFCRKNFLSPQTLANIEDLKGQLLVAVAD 1266
Query: 885 NGF---------------------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
+GF IP+ V S S N V +V+ YP +
Sbjct: 1267 SGFLQLTDAERQALNKLRFSGRRRHQAFFDIPKRVDSNSDNEVV---AQSVIAWSFYPKL 1323
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRN 977
+R P G R + + LHP S+N K ++ + Y I + +
Sbjct: 1324 L-VRDPGSKGLRNI--GNNQSISLHPSSVN-----KGYNELRWLSYYNIMQSKSFYNAHE 1375
Query: 978 CTVVGPLPLLLLATEI 993
T P + LL ++
Sbjct: 1376 TTATDPFAIALLCGDV 1391
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 146/223 (65%), Gaps = 20/223 (8%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
+Q++ R +LP+ F+ + V+ QVV+I GETGCGK+TQVP FLLEH +G CK
Sbjct: 660 FQQMLASRMELPMWQFRQQVVDMVEREQVVIICGETGCGKSTQVPSFLLEHQLLQGRPCK 719
Query: 238 IVCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVL 291
I CT+PRRISA S+A R+S E GE GD +GY IRLES + + +V+ T G++
Sbjct: 720 IYCTEPRRISAISLARRVSEELGEGKGDLGTNRSLVGYSIRLESNTARETRLVYATTGIV 779
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
+R+L E SN D+ +TH+++DE+HER SDF+L +++ +L L+
Sbjct: 780 MRML---------EGSN-----DLQDITHLVLDEVHERSIDSDFLLIVLKKLLLRRKDLK 825
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++LMSAT+DA+RFS+Y GG PV+ VPG T+PV+ +LED + +
Sbjct: 826 VVLMSATVDAERFSKYLGGAPVLTVPGRTFPVRVQFLEDAVEL 868
>gi|24585920|ref|NP_724440.1| maleless, isoform C [Drosophila melanogaster]
gi|21626790|gb|AAM68335.1| maleless, isoform C [Drosophila melanogaster]
gi|28381003|gb|AAO41468.1| LD44547p [Drosophila melanogaster]
gi|33636575|gb|AAQ23585.1| RE21725p [Drosophila melanogaster]
gi|220951968|gb|ACL88527.1| mle-PC [synthetic construct]
Length = 936
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 255 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 314
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 315 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 374
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 375 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 434
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 435 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 493
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 494 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 551
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 552 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 607
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 608 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 663
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 664 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 720
Query: 990 AT 991
+
Sbjct: 721 GS 722
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 161/240 (67%), Gaps = 22/240 (9%)
Query: 167 SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL 226
SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKTTQ+ Q++L
Sbjct: 6 SLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYIL 65
Query: 227 E-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSI 283
+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES + + +I
Sbjct: 66 DDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAI 125
Query: 284 VFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM 343
+FCT GVLLR L EA + ++HIIVDEIHERD SDF+L I+RDM
Sbjct: 126 LFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDFLLVILRDM 169
Query: 344 LPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI---LKSAES 400
+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ + + SAES
Sbjct: 170 VDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAES 229
>gi|384875317|gb|AFI26244.1| maleless [Drosophila melanogaster]
Length = 936
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 255 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 314
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 315 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 374
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 375 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 434
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 435 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 493
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 494 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 551
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 552 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 607
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 608 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 663
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 664 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 720
Query: 990 AT 991
+
Sbjct: 721 GS 722
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 161/240 (67%), Gaps = 22/240 (9%)
Query: 167 SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL 226
SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKTTQ+ Q++L
Sbjct: 6 SLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYIL 65
Query: 227 E-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSI 283
+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES + + +I
Sbjct: 66 DDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAI 125
Query: 284 VFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM 343
+FCT GVLLR L EA + ++HIIVDEIHERD SDF+L I+RDM
Sbjct: 126 LFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDFLLVILRDM 169
Query: 344 LPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI---LKSAES 400
+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ + + SAES
Sbjct: 170 VDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAES 229
>gi|407924797|gb|EKG17824.1| Helicase [Macrophomina phaseolina MS6]
Length = 1488
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 252/482 (52%), Gaps = 47/482 (9%)
Query: 543 IDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI +LL ++ D AILVFLPG +I + D L+ + F ++I PL
Sbjct: 934 VDYELIVRLLERVAYDPGHTQYSKAILVFLPGIAEIRQLNDMLVGHESF--AQNWLIYPL 991
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+ F PPPG RKI+L+TNIAET ITI D+ VID+G+ KE +D +S
Sbjct: 992 HSTIASEDQQAAFLVPPPGVRKIVLATNIAETGITIPDITCVIDTGKHKEMRFDERRQLS 1051
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIPIEELCLQV 717
L S++S+A+AKQR GRAGR Q G+C+HL+++ R L + Q PE+ R+ +++L ++V
Sbjct: 1052 RLIQSFISRANAKQRRGRAGRVQEGLCFHLFTKYRNDELMAEQQTPEMLRLSLQDLVMRV 1111
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+ +IE L + LDPP IR AI L ++ AL+ +E++T LG +L L + +
Sbjct: 1112 KICKLG-DIEPTLSQALDPPSPKNIRRAIDALIEVDALTANEELTSLGRQLAKLPLDANL 1170
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K+ A ++ C+D A+T+A +DPF P +++RA A+ + G SD L
Sbjct: 1171 GKLALLASILGCVDVAITIAAILSSKDPFLAPF--GQRQRADLARL---AFRRGDSDLLT 1225
Query: 838 VIAAFECWKNA-KQRGQ-EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDV 892
A+ W+ GQ E FC + F+S + + ++ QL + L+ GF+ PE+
Sbjct: 1226 AYNAYATWRKVCTTPGQSEFQFCQKNFLSRQNLANIEDLKSQLLSSLVDAGFVTPTPEER 1285
Query: 893 SSCSH---NAR------VP------------GIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
+ + +AR VP ++ AV+ YP + ++G+ +
Sbjct: 1286 HALNRYRPSARNRSSSFVPVLASANANAANDLLLSAVIAWSFYPKIL-----TRDGKGWR 1340
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDDCP--LMVYDEITRGDGGMHVRNCTVVGP-LPLLL 988
A V L P S+N + + P L Y + G ++ + T V P +PL+L
Sbjct: 1341 NIANNQSVSLAPTSVNKNIPHQPGVQPPRYLSYYHIMQSGASKLYNAHSTTVAPDVPLVL 1400
Query: 989 LA 990
LA
Sbjct: 1401 LA 1402
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 199/327 (60%), Gaps = 37/327 (11%)
Query: 164 KVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQ 223
+++ + R + ++++ +RS+LP++ ++DV S ++ NQVV++ GETGCGK+TQ+P
Sbjct: 657 RLKEMWQRKKSTPAYQRMLVQRSQLPMAHYRDVTLSAIERNQVVILCGETGCGKSTQLPA 716
Query: 224 FLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDN------IGYKIRLESKG 277
F+LEH + G CK+ CT+PRRISA S+A+R+S E GEN D +GY IRLES
Sbjct: 717 FILEHQLANGRPCKVYCTEPRRISAISLAQRVSEELGENKNDVGTARSLVGYAIRLESHI 776
Query: 278 GKHSSIVFCTNGVLLRLLVS-QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFM 336
+ +V+ T G++LR+L S +G+ DD+ TH+++DE+HER +DF+
Sbjct: 777 AASTRLVYATVGIVLRMLESAKGL------------DDI---THLVIDEVHERSIDTDFL 821
Query: 337 LAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI-- 394
L ++R ++ P L++ILMSAT+DADRFS+Y G P++ VPG T+PV++ +LED + +
Sbjct: 822 LIVLRALMVRRPDLKVILMSATVDADRFSKYLDGAPIVTVPGRTFPVQTRFLEDAIELTH 881
Query: 395 --LKSAESNHLDSASLIVPNEDPELTEENKSTLD---EAISLAWSN-----DEFDMLLEL 444
+K+ +++++D + P +D + + NKS + + S+A N DE+ + EL
Sbjct: 882 YDVKTQKTSYVDQEA---PEDDEDNPDGNKSGVPGNLQGYSVATRNALKEYDEYRVDYEL 938
Query: 445 VSLEGSPNVYNYQHTLTGLTPLMVLAG 471
+ Y+ HT L+ L G
Sbjct: 939 IVRLLERVAYDPGHTQYSKAILVFLPG 965
>gi|154332726|ref|XP_001562625.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134059628|emb|CAM41748.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 1281
Score = 233 bits (593), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 162/502 (32%), Positives = 260/502 (51%), Gaps = 60/502 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE---DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
LA +N ++I+ LIE ++ I D+ GA+LVFLPG +I + ++L NP R
Sbjct: 630 LARMNYDVINYELIESIVEYI--DTALRVPGAVLVFLPGMAEIQRCLEQLKLNP--RLAK 685
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ LHS + S +Q+ VF RPP G RK+IL TNI ET+ITIDD VYVID+G+ KE Y
Sbjct: 686 SCLFYNLHSSLGSSEQQGVFCRPPAGKRKVILGTNIMETSITIDDAVYVIDTGKAKENRY 745
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ ++S L + +SKA+ +QR GRAGR Q G C+ L+++ + + D Q+ E+ R+P+E
Sbjct: 746 NARKSLSELVTVNISKANCRQRQGRAGRVQEGFCFRLFTEAQFEAFEDHQLCEMHRVPLE 805
Query: 712 ELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
L LQ+ L +E +L+K L PP +I +++ VL +GAL++++++T LG+ L L
Sbjct: 806 SLILQIYALHLGDEVE-YLRKALTPPEERSIHSSVKVLTTLGALTVEKRLTSLGQHLANL 864
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGG 831
+ + KM+ L+ C+DP LT+A R PF + F +L
Sbjct: 865 PLDVRVGKMIIHGALLQCIDPVLTMAACLATRSPFIASADFRTEVENMRRAFAGETL--- 921
Query: 832 QSDQLAVIAAFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
SDQL+ A+ W +A +Q+G A C +++S + + ++Q + L + GF+
Sbjct: 922 -SDQLSAWFAYNKWVSALQQKGTAAARKVCEDHYLSPATLKQIESTKRQYERYLYEAGFL 980
Query: 889 ---PEDVSSCS-----------------------HNARVPGIIHAVLMAGLYPMVARLRP 922
P S + N+ I A L+AGLYP +A++R
Sbjct: 981 DNAPRSRMSTTKFIFPPFTTLDGRVFEAGGPKLNENSTSTRCILACLVAGLYPNIAQMRM 1040
Query: 923 P--HKNGR----------RFVETAGGAKVRLHPHSLNFK-LSFKKTDDCPLMVYDEITRG 969
H+ G +F T G++ +HP S+ K +SF PL+VY + +
Sbjct: 1041 TRGHRRGEGGSYGGKHTVKF-STFDGSECLVHPSSVAGKEVSFAS----PLLVYVDKVKT 1095
Query: 970 DGGMHVRNCTVVGPLPLLLLAT 991
+R ++V PL ++L +
Sbjct: 1096 SATF-LREVSMVAPLHVILFGS 1116
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 141/227 (62%), Gaps = 16/227 (7%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L S EK + + + R LP ++ + + + + VV+I GETG GKTTQ+PQFL E
Sbjct: 352 LKSSWEKLKSGSSLRKSRDSLPAHKVRETLRAALQKHNVVVIGGETGSGKTTQIPQFLYE 411
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVF 285
+ +G + IVCTQPRR++ATSVA R++ ER E +G +GY IRLE+ K + I +
Sbjct: 412 FMCEEGNGSSANIVCTQPRRLAATSVALRVAEERDEAVGGTVGYSIRLENCVSKKTQITY 471
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT G++LR L + + ++H++VDEIHER +DF+L ++RD++
Sbjct: 472 CTTGIVLRRLQTDKY--------------LGRVSHVVVDEIHERGVDTDFLLILLRDLVR 517
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
L+++LMSAT+D++ F++YF G PVI + G T+PVK +LE ++
Sbjct: 518 RRQDLKVVLMSATMDSELFARYFDGAPVIFIEGRTFPVKVMHLEQII 564
>gi|392571491|gb|EIW64663.1| P-loop containing nucleoside triphosphate hydrolase protein [Trametes
versicolor FP-101664 SS1]
Length = 1293
Score = 233 bits (593), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 216/428 (50%), Gaps = 33/428 (7%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLAN--PF---FRDTSKFVIIPLHSMV 602
I +LRK SEDG +LVFLPGW+DI+ R L N P F DTS+F I LHS +
Sbjct: 649 IAHVLRK----SEDGHVLVFLPGWDDISAVRRVLTDNSKPLGFDFNDTSRFSIHLLHSTI 704
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P +Q+ +F+ PP G R++ILSTNIAET++TI DVVYV+D+ R+KE+ YDP ++S L S
Sbjct: 705 PVAEQQAIFEPPPKGIRRVILSTNIAETSVTIPDVVYVVDTARVKEQRYDPARHISNLVS 764
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD- 721
+WV ++ QRAGRAGR + G Y + S A L Q E+KR+ +E + + VK L+
Sbjct: 765 AWVGSSNLNQRAGRAGRHRPGEYYGILSHRHAEELHPHQTVEMKRVDLENVVMHVKALNF 824
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
P I+ L T++PP I AI L +GAL + +T LG L L V + +++
Sbjct: 825 PGMTIQGVLAATIEPPAPDRIEAAIQSLHMVGALDDNNNLTSLGNVLLQLPVDVRLGRLV 884
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
F CLD ALTLA R+PF ++P K A+ + +SD LA + A
Sbjct: 885 LFGAFFRCLDAALTLAAIMGSREPF---VAPMHVKAEAQARKNFWTPEEFRSDTLAALRA 941
Query: 842 FECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN 898
+ W + +G FC F+S + + ++ L L G + +
Sbjct: 942 YREWWALQSQGHYVTANRFCQDNFLSKPTLLNIQKVKDHLLKALYDVGVVDISAGGANKM 1001
Query: 899 ARVPGIIHAV-----------------LMAGLYPMVARLRPPHKNGRRFVETAGGAKVRL 941
A VP + L+A L + + + + G R TA V +
Sbjct: 1002 AYVPPGARSREALSVPPSLNEHNESLPLLAALIAIACQPKFAIRTGERTYRTAVDKTVIV 1061
Query: 942 HPHSLNFK 949
HP S+N +
Sbjct: 1062 HPSSVNHR 1069
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 159/286 (55%), Gaps = 37/286 (12%)
Query: 123 PDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIE---KDANLR 179
PDDGE T+G++ + +P S +A K ++L++R + + L
Sbjct: 316 PDDGE--------------STQGQQAGGYRRPPPSAMFLAEKSQTLSNRRQAYLTNPQLE 361
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCK 237
I R+ LP+ + + + ++ N V + TG GKTTQ+PQ +L+ +GE C
Sbjct: 362 AIRNTRATLPVFTKSEELLKHINENDVTICMAATGSGKTTQIPQLILDEYIDRGEGAKCN 421
Query: 238 IVCTQPRRISATSVAERISVERGENIG-DNIGYKIRLESKGGK-HSSIVFCTNGVLLRLL 295
I+CTQPRRI+A SVAER++ ERGE G ++GY++R ESK + + + +CT GV LR +
Sbjct: 422 IICTQPRRIAAISVAERVAKERGETCGRGSVGYQVRFESKTPEPNGCVTYCTTGVFLRKM 481
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY----PHLR 351
S + +S + +TH+IVDE+HERD D ML +++ +L ++
Sbjct: 482 QSALLDSSSRSS-------MDDITHVIVDEVHERDVDIDLMLVVLKRLLAERRAQKKPIK 534
Query: 352 LILMSATLDADRFSQYF---GGCP--VIQVPGFTYPVKSFYLEDVL 392
++LMSAT+D+ F YF G P V+++PG +PV+ +L+D +
Sbjct: 535 IVLMSATIDSTLFRTYFPDEHGKPAGVVEIPGRAFPVQKNFLDDFV 580
>gi|322701513|gb|EFY93262.1| DEAD/DEAH box helicase [Metarhizium acridum CQMa 102]
Length = 1349
Score = 232 bits (592), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 217/393 (55%), Gaps = 23/393 (5%)
Query: 563 AILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
IL+FLPG +IN A R + ++PLH+ + + +QK+VF +PPPG RK++
Sbjct: 844 GILIFLPGVGEINH------ACNLLRSINSLHVLPLHASLETREQKRVFSKPPPGKRKVV 897
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQA 682
++TN+AET+ITIDD+V VIDSG++KE S+D NN+ L+ +W S+A+ KQR GRAGR Q
Sbjct: 898 VATNVAETSITIDDIVAVIDSGKVKETSFDAQNNMRKLEETWASRAACKQRRGRAGRVQE 957
Query: 683 GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTI 742
G CY LY++ + + PEI+R+P+E+LCL V+ + ++ FL ++ PP + I
Sbjct: 958 GRCYKLYTENLERQMAERPEPEIRRVPLEQLCLSVRAMGMR-DVARFLGRSPTPPDAKAI 1016
Query: 743 RNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDY 802
AI +L+ +GAL DE +T +G++L L K++ F + CLD +T+A
Sbjct: 1017 EEAIKLLRRMGALDGDE-LTAMGQQLAMLPADLRCGKLMVFGAIFGCLDDCVTIAAILST 1075
Query: 803 RDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ----RGQEAWFC 858
R PF P E+ R +F + G D + + AF W + + + Q FC
Sbjct: 1076 RSPFLAPQEKREESRQARMRF-----FSGNGDLITDMEAFREWDSLMRDRLPQRQVRSFC 1130
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS--SCSHNARVPGIIHAVLMAGLYPM 916
+ F+S ++ + + Q L + G P S + S++ R +I A++ + P
Sbjct: 1131 DENFLSYQTLSDISNTKSQYYEALNEIGLAPRFRSDGATSNSVRNVQLIRALIASAFTPQ 1190
Query: 917 VARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
+AR++ P K ++ + GA + L P + + K
Sbjct: 1191 IARIQYPDK---KYASSMSGA-MELDPEARSIK 1219
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 143/231 (61%), Gaps = 17/231 (7%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK 232
++ + + ++ +R +LP ++ I TV N V +ISGETG GK+TQ QF+L+ ++ K
Sbjct: 569 QESSAWKDMLSKRQRLPAWQMREKIVKTVKDNHVTIISGETGSGKSTQSVQFILDDLYGK 628
Query: 233 G--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGV 290
G ++ TQPRRISA +A+R++ ER +G +GY IR ES+ K + I F T GV
Sbjct: 629 GVGGCANMIVTQPRRISALGLADRVAEERCSKVGGEVGYIIRGESRQSKDTRITFVTAGV 688
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH- 349
LLR L + G R+++ A DVS H+++DE+HER +DF+L +IRD++ +
Sbjct: 689 LLRRLQTSG-GRVEDVVASLA--DVS---HVVIDEVHERSLDTDFLLNLIRDVMRTKKDM 742
Query: 350 LRLILMSATLDADRFSQYFG------GCPVIQVPGFTYPVKSFYLEDVLSI 394
L+LILMSATLDA F YF GC +++ G T+PV +YL+DV+ +
Sbjct: 743 LKLILMSATLDASTFMDYFATEGLSVGC--VEIAGRTFPVDEYYLDDVIRM 791
>gi|116201091|ref|XP_001226357.1| hypothetical protein CHGG_08430 [Chaetomium globosum CBS 148.51]
gi|88176948|gb|EAQ84416.1| hypothetical protein CHGG_08430 [Chaetomium globosum CBS 148.51]
Length = 1459
Score = 232 bits (592), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 245/496 (49%), Gaps = 56/496 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ ++ LI QL+ +I +D S AILVFLPG +I D LL + F +
Sbjct: 898 LAQMDEYRMEYDLIVQLISRIAVDPDYASFSKAILVFLPGIAEIRTLNDMLLGDRTFAEN 957
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ P+HS + S +Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 958 --WLVYPMHSSIASEEQEAAFLVPPPGMRKIVLATNIAETGITIPDVTCVIDAGKHREMR 1015
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIP 709
+D +S L S++S+A+AKQR GRAGR Q G+C+HL+++ R S+ D Q PE+ R+
Sbjct: 1016 FDERRQLSRLIDSFISRANAKQRRGRAGRVQEGLCFHLFTKYRHDTSMNDQQTPEMLRLS 1075
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS-LDEKVTELGEKL 768
+++L ++VK+ IE+ L + LDPP + IR AI L D+ AL+ E++T LG +L
Sbjct: 1076 LQDLAIRVKICKIG-GIEETLSQALDPPSAKNIRRAIDALVDVRALTATTEELTPLGLQL 1134
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L + + K++ + CLD A+T+A + PF P + F
Sbjct: 1135 ARLPLDVFLGKLILMGAVFKCLDMAITVAAILSSKSPFVAPFGQRNQADTIRRGFR---- 1190
Query: 829 YGGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L V A+ WK Q G E FC + F++S + + ++ QL +
Sbjct: 1191 -KGDSDLLTVYNAYTAWKRVCQSTTSGGAEFQFCRKNFLASQTLANIEDLKGQLLVAVAD 1249
Query: 885 NGF---------------------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
+GF +P+ V+S S N V +V+ YP +
Sbjct: 1250 SGFLQLTETERQALRKLRFSGRRRHQAFFDVPKRVNSNSDNEVV---TQSVIAWSFYPKL 1306
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRN 977
+R P G R V + LHP S+N K +D + Y I + +
Sbjct: 1307 L-VRDPGSKGLRNV--GNNQSISLHPSSVN-----KGFNDIRWLSYYHIMQSKAFYNAHE 1358
Query: 978 CTVVGPLPLLLLATEI 993
T P + LL ++
Sbjct: 1359 TTATDPFAVALLCGDV 1374
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 148/222 (66%), Gaps = 20/222 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ ++ R +LP+ F+ + VD +QVV+I GETGCGK+TQVP FLLEH +G+ CKI
Sbjct: 644 QHMLASRMQLPMWQFRQQVVDIVDKHQVVIICGETGCGKSTQVPSFLLEHQLLQGKPCKI 703
Query: 239 VCTQPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A R+S E GE+ +G N +GY IRLES + + +V+ T G+++
Sbjct: 704 YCTEPRRISAISLARRVSEELGESKAELGTNRSLVGYSIRLESNTARETRLVYATTGIVM 763
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L E SN D++ +TH+++DE+HER SDF+L +++ +L L++
Sbjct: 764 RML---------EGSN-----DLADITHLVLDEVHERSIDSDFLLIVLKKLLMRRKDLKV 809
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+LMSAT+DA+RFS Y G PV+ VPG T+PV+ YLED + +
Sbjct: 810 VLMSATVDAERFSNYLDGAPVLTVPGRTFPVRVAYLEDAIEL 851
>gi|384491615|gb|EIE82811.1| hypothetical protein RO3G_07516 [Rhizopus delemar RA 99-880]
Length = 1473
Score = 232 bits (592), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 243/444 (54%), Gaps = 37/444 (8%)
Query: 529 QLLDKYLATVNPELIDLVLIEQLLRKICMDSE-----DGAILVFLPGWEDINKTRDRLLA 583
+LL +Y N + ID LI +L+R I MD E AIL+F+PG +I D +
Sbjct: 936 RLLSRYR---NHQKIDYDLIARLVRHI-MDHETIQEFQPAILIFMPGAVEIKNCIDAIQG 991
Query: 584 NPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDS 643
+ D+ + I+PLH+ + +Q +VF++ P RKI+++TN+AET+ITI+ VVYVIDS
Sbjct: 992 SVGASDSVE--ILPLHANLSPQEQTRVFRKVPNHVRKIVVATNVAETSITIEGVVYVIDS 1049
Query: 644 GRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQV 702
GR+KE ++ N++ L +W S+AS +QR GRAGR + G C+ L+++ A + D QV
Sbjct: 1050 GRVKETQFEAANSMVHLVETWASRASCRQRRGRAGRTRPGQCFKLFTRNTHEAKMRDQQV 1109
Query: 703 PEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVT 762
PE+ R P+E+LCL VK + + +++ FL + +D P + +A+ L+ + A+ +++T
Sbjct: 1110 PELLRTPLEQLCLTVKAMGQD-DLKSFLAQAIDRPSIAALESAVNSLRQVEAIDKQDQLT 1168
Query: 763 ELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
LG+ + + +SKML + + CL+P LT+A + PFT P+ E+ R K
Sbjct: 1169 ALGKHMANIPADLRISKMLIYGAVFHCLEPILTIASIMSLKSPFTSPMEKREEARDAREK 1228
Query: 823 FELASLYGGQSDQLAVIAAFECWKN-AKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQ 879
F G+SD LA + A++ W + +G +A FC + ++S +N + +R+Q
Sbjct: 1229 FNF-----GKSDWLADMKAYDMWYEIIRSKGMKAARQFCLENYLSFTTLNEIQNLRRQYL 1283
Query: 880 TELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE------- 932
L GF + S + NA ++ +++ AGL P +A+++ P + +
Sbjct: 1284 EALYDIGFY-QKSKSMNDNASNLNLLKSIIFAGLNPNIAKIKLPDTKYDKVLSGTVEREK 1342
Query: 933 --------TAGGAKVRLHPHSLNF 948
T +V LHP SL F
Sbjct: 1343 EAKEIKYYTKNDGRVFLHPSSLLF 1366
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 177/293 (60%), Gaps = 25/293 (8%)
Query: 116 DLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVES------LT 169
D +PP + E+L + K K + KR + K M A A+K ES L
Sbjct: 630 DQIIAHPPKLRDVSERLTTLEPIKPKKIQ-KRKQLKKKSYMDNA-AAVKEESERLKEALL 687
Query: 170 SRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL--E 227
R+ DA + + RS+LP ++FK+ + V +QV ++SGETGCGKTTQVPQF++ E
Sbjct: 688 ERLGSDA-YASMAQVRSRLPANAFKENVIKAVGEHQVTIVSGETGCGKTTQVPQFIMDEE 746
Query: 228 HIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCT 287
+ +G C I+CTQPR+ISA VAER++ ER E IG +GY IR E+K + + + F T
Sbjct: 747 IMQGRGANCNIICTQPRKISAMGVAERVADERCETIGKTVGYAIRGETKVSRETRLQFVT 806
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L S ++ ++H+++DE+HER SDF+L I+R +L
Sbjct: 807 TGVLLRRLQSDS--------------ELEGVSHVMIDEVHERSVDSDFLLIILRQLLERR 852
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAES 400
++++LMSATL+ FS YFGG PVI++PGFT+PV+ F+LED+L+ + +++
Sbjct: 853 KDIKIVLMSATLNQALFSGYFGGAPVIEIPGFTHPVQDFFLEDILATVHHSQT 905
>gi|443688667|gb|ELT91287.1| hypothetical protein CAPTEDRAFT_220258 [Capitella teleta]
Length = 1221
Score = 232 bits (592), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 242/457 (52%), Gaps = 30/457 (6%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
L+ L+ I E GAIL+FLPGW I + L +P + ++ ++PLHS +P +
Sbjct: 639 LVTSLIEYIKSLGEPGAILIFLPGWSLIFALQRFLSEHPSI-GSQRYRLLPLHSQIPREE 697
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q++VF P G KIILSTNIAE++ITI+DVV+VIDS + K K + +NN++ + W S
Sbjct: 698 QRRVFDPVPEGVTKIILSTNIAESSITINDVVFVIDSCKAKMKLFTSHNNMTNYATVWCS 757
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
K + +QR GRAGR + G +HL S+ R L PEI R P+ EL L +KLL +
Sbjct: 758 KTNLEQRQGRAGRVRKGFSFHLCSRARFDRLDQHTTPEIFRTPLHELALSIKLLRLG-QV 816
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FLQK ++PP + A +L+++ AL ++T LG L + + P ++KM+ + +
Sbjct: 817 GAFLQKAIEPPPLDAVIEAEAMLREMKALDTSNELTPLGRILARMPIEPRLAKMIIYGCI 876
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIAAFECW 845
C D T+A +S + +PF ++++R A +L G + SD +A++ AF+ W
Sbjct: 877 FFCGDAVATIAASSTFPEPFI-----SDRRRLNWAH---KNLSGSRCSDHVALLHAFQLW 928
Query: 846 KNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP- 902
++A+ G+ EA+FC Q ++ + M + QL+ L+ GF E + + N P
Sbjct: 929 EDARSGGEDAEAYFCDQKMLNMQTLRMTHEAKNQLRDILVNAGFPEECLLPQTFNYSGPD 988
Query: 903 ---GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL---NFKLSFKKTD 956
+I ++L GL+P V R +R V T +H S+ N K+SF
Sbjct: 989 TKLDVIISMLCMGLHPNVCWHR-----AKRQVLTTHAKPALVHKSSVNCSNMKISFAS-- 1041
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
P V+ E R + + T+V L L+L A +
Sbjct: 1042 --PFFVFGEKIRTR-AVSCKQMTMVSALQLILTARSV 1075
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 153/226 (67%), Gaps = 19/226 (8%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW-- 230
E D L+Q+ E+R KLP+S+ D I S +++NQV +I GETG GKTTQVPQ++L+H
Sbjct: 367 ENDPALKQMTEDRFKLPVSNSYDAIISAIENNQVTVIRGETGSGKTTQVPQYILDHFIEA 426
Query: 231 SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNG 289
++G C I+CTQPRRISA S+AER++ ER EN+G + GY +R ES + + +I++CT G
Sbjct: 427 NRGAHCSIICTQPRRISAVSIAERVANERCENLGISSGYSVRFESYFPRPYGAIMYCTVG 486
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
LLR L EA + ++H++VDEIHERD +DF+L ++RDM+ ++P
Sbjct: 487 TLLRKL---------EAG-------LRGVSHVVVDEIHERDINTDFLLVLLRDMVRAFPQ 530
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
LR+ILMSAT+D F YF V++V G +PV+ ++LED++ +L
Sbjct: 531 LRIILMSATIDTSMFVDYFDSQSVVEVHGRCHPVQDYFLEDIVQML 576
>gi|171677410|ref|XP_001903656.1| hypothetical protein [Podospora anserina S mat+]
gi|170936773|emb|CAP61431.1| unnamed protein product [Podospora anserina S mat+]
Length = 1513
Score = 232 bits (592), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 157/501 (31%), Positives = 243/501 (48%), Gaps = 64/501 (12%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ ID L+ QL+ +I +D AILVFLPG +I D LL + FF +
Sbjct: 944 LAAMDEYQIDFDLVLQLISRIAVDPNYTDFSKAILVFLPGIAEIRTLNDMLLGDKFFAEN 1003
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + +Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 1004 --WLVYPLHSSIATEEQEAAFLVPPPGVRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1061
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R + + D Q PE+ R+
Sbjct: 1062 FDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTKYRHDNIMSDQQTPEMLRLS 1121
Query: 710 IEELCLQVKLLDPNC---NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-DEKVTELG 765
++EL ++VK C IE+ L + LDPP + IR AI L D+ AL+ E++T LG
Sbjct: 1122 LQELAIRVK----TCKIGGIEETLGEALDPPSAKNIRRAIDALVDVRALTASSEELTPLG 1177
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFEL 825
+L L + + K++ + CLD A+T+A + PF P + F
Sbjct: 1178 LQLARLPLDVFLGKLILLGSIFKCLDMAVTVAAILSSKSPFIAPFGQRSQADTVRRGFR- 1236
Query: 826 ASLYGGQSDQLAVIAAFECWKNAKQ----RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTE 881
G SD L V A+ WK Q G E FC + F+S + + ++ QL T
Sbjct: 1237 ----KGDSDLLTVYNAYSAWKRVCQSSASSGAEYQFCRKNFLSPQTLANIEDLKGQLITS 1292
Query: 882 LIKNGF-----------------------------IPEDVSSCSHNARVPGIIHAVLMAG 912
++ +GF IP+ V S N V +V+
Sbjct: 1293 VVDSGFLQLTAEERQAHNRLRFGGRRRRSGQVFFEIPKRVDGNSDNEVV---AQSVIAWS 1349
Query: 913 LYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
YP + + G+ + ++LHP S+N + M Y I +
Sbjct: 1350 FYPKLL-----VREGKGWRNVGNNQAIQLHPSSVN---KGGGNGEVKWMSYYHIMQNKQF 1401
Query: 973 MHVRNCTVVGPLPLLLLATEI 993
++ T V P + LL ++
Sbjct: 1402 LNAHETTAVDPFAVALLCGDV 1422
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 177/306 (57%), Gaps = 35/306 (11%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+++ R +LP+ F++ + + V+ NQVV++ GETGCGK+TQVP FLLE KG CKI C
Sbjct: 691 MLQSRVQLPMWQFREQVVNAVEQNQVVIVCGETGCGKSTQVPSFLLEDQLMKGRPCKIYC 750
Query: 241 TQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A+R+S E GEN GD +GY IRLES + + +V+ T G+++R+
Sbjct: 751 TEPRRISALSLAKRVSEELGENKGDLGTSRSLVGYSIRLESNTCRETRLVYATTGIVMRM 810
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L E+SN D+ +TH+++DE+HER SDF+L +++ +L L+++L
Sbjct: 811 L---------ESSN-----DLQEITHLVLDEVHERSIDSDFLLIVLKKLLIRRKDLKVVL 856
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNED 414
MSAT+DA+RFS+Y G PV+ VPG T+PV YLED + + + ++D
Sbjct: 857 MSATVDAERFSKYLSGAPVLTVPGRTFPVSVAYLEDAVELTGYSLDTRPSKEKFTDLDDD 916
Query: 415 PELTEENKS--------------TLDEAISLAWSNDEFDMLLELVS-LEGSPNVYNYQHT 459
E +N S T + ++ +FD++L+L+S + PN ++
Sbjct: 917 VEAEIDNSSKPELIKALRQYSPRTRNTLAAMDEYQIDFDLVLQLISRIAVDPNYTDFSKA 976
Query: 460 LTGLTP 465
+ P
Sbjct: 977 ILVFLP 982
>gi|344301481|gb|EGW31793.1| hypothetical protein SPAPADRAFT_141206 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1407
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 228/420 (54%), Gaps = 21/420 (5%)
Query: 536 ATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVI 595
T+N +LI L + +K+ ++ +G+IL+F+PG +IN+T R + N F SK +
Sbjct: 812 GTLNYDLI-AKLTAHIDKKLSSENNNGSILIFMPGIMEINQTI-RAINNVF---ESKVLT 866
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
+PLHS + S +Q++VFK PP G RK+++STN+AET+ITI D V VID+GR K +D
Sbjct: 867 LPLHSALTSNEQRRVFKTPPKGTRKVVVSTNVAETSITIPDCVVVIDTGRSKTMFFDAKL 926
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
N + L +W S+A QR GR+GR G CYHLY+Q ++ +PEIKR +E L L
Sbjct: 927 NTTKLIENWCSQAEISQRRGRSGRITNGNCYHLYTQTTVDAMIPQPIPEIKRTRLENLYL 986
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
VK + + +E+FLQ LD P ++ + L D+GAL +D+K++ LGE L L P
Sbjct: 987 VVKAMGIS-KVEEFLQSGLDAPDQTSLATSRKFLHDLGAL-VDDKLSHLGEYLSYLPTDP 1044
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
K+L + C+D LTLA S PF ++ + +F G Q D
Sbjct: 1045 ASGKLLILGCIFGCVDVCLTLAAISSTGSPFINSFDNRDRIKQVQRRFS-----GDQGDL 1099
Query: 836 LAVIAAFECWKNAKQRGQEA-WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV-- 892
+A++ A+ ++ +++G+ F + F+S +N + R Q + L GFIP
Sbjct: 1100 IAMVNAYSAFQEQREQGKNTKKFITDNFLSYTTLNDITSTRSQYVSLLKDLGFIPIHYKP 1159
Query: 893 --SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKL 950
S + N II A++ YP VAR++ P ++ ++A G+ + + P + + K
Sbjct: 1160 RESKLNRNENNSFIIRAIITGAFYPQVARVQYPDP---KYFKSAQGS-IAMDPDARSIKF 1215
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 152/246 (61%), Gaps = 14/246 (5%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE- 234
+ L+Q + +R+KLP + + + ST+ SN+V LI+GETG GK+TQV QF+L+H+ ++G+
Sbjct: 573 SELKQSLAKRAKLPAWNKQQDLVSTITSNKVTLITGETGSGKSTQVVQFILDHLNAQGDF 632
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T KI+CTQPRRIS +AERIS ER +G GY IR E++ + I F T GVLLR+
Sbjct: 633 TTKIMCTQPRRISTIGLAERISEERVGKVGHETGYVIRGENRTNPKTRISFVTTGVLLRM 692
Query: 295 LVSQGVSRLKEASNKPAKDDV-SALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
L S S K ++V L +I +DE+HER DF+L I++ + + +L+++
Sbjct: 693 LQSF-------LSGKAGNNNVFDELGYIFIDEVHERSVDGDFLLIILKKISNRFKNLKIV 745
Query: 354 LMSATLDADRFSQYFGGCPV--IQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVP 411
LMSAT++ ++F +F P+ I + G T+P+K +YL+ +L + + N + +I P
Sbjct: 746 LMSATINIEKFVNFF-STPLQHIHIEGRTFPIKDYYLDGILDEIDYSIQN--NDGEIIRP 802
Query: 412 NEDPEL 417
+ D
Sbjct: 803 SADSHF 808
>gi|157382858|gb|ABV48864.1| maleless [Drosophila melanogaster]
Length = 1286
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFCCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGVCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|108711083|gb|ABF98878.1| Helicase associated domain family protein, expressed [Oryza sativa
Japonica Group]
Length = 1138
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/489 (31%), Positives = 251/489 (51%), Gaps = 53/489 (10%)
Query: 515 KKHMENALSDSMKQQLLDKY-------LATVNPELIDLVLIEQLLRKICMDSEDGAILVF 567
K + + D++K + Y L+ NP+ I LIE +L IC GA+LVF
Sbjct: 489 KNQITTLVEDALKTSSFETYGSRTRDSLSNWNPDCIGFNLIEAVLCHICRKERSGAVLVF 548
Query: 568 LPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNI 627
+ GW+DI+ +D+L A+P D ++ +++ H + + +Q+ +F++PPP RKI+L+TN+
Sbjct: 549 MTGWDDISCLKDQLKAHPLLGDPNRVLLLACHGSMATAEQRLIFEKPPPNVRKIVLATNM 608
Query: 628 AETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYH 687
AE +ITI+D+V+V+D G+ KE +YD NN L SW+SKASA+QR GRAGR Q G CYH
Sbjct: 609 AEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISKASARQRRGRAGRVQPGECYH 668
Query: 688 LYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAII 747
LY + + + + + CL P +FL+
Sbjct: 669 LYPRYK-------KFASWQHWGVSISCLTA----PGTTSLEFLKM--------------- 702
Query: 748 VLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT 807
IGAL +E +T+LG L L V P + KML + C+DP LT+ RDPF
Sbjct: 703 ----IGALDENENLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILTVVAGLSARDPFL 758
Query: 808 LPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGV 867
LP +++ A AK ++ SD +A++ A+E WK+A++ G +C + F+S+
Sbjct: 759 LP--QDKRDLAGTAKSRFSA--KDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQT 814
Query: 868 MNMLLGMRKQLQTELIKNGFIPEDV---SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH 924
+ + +RKQ L G + D +S SHN ++ ++ +GL+P + + H
Sbjct: 815 LQAIHSLRKQFSYILKDAGLVDSDANTNNSLSHNQ---SLVRGIICSGLFPGITSV--VH 869
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPL 984
+ +T +V L+ +S+N K +T P +V+ E + + + +R+ T V
Sbjct: 870 RENSMSFKTMDDGQVLLYANSVNAKY---QTIPYPWLVFGEKVKVN-AVFIRDSTGVSDS 925
Query: 985 PLLLLATEI 993
L+L +
Sbjct: 926 ILILFGGAV 934
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 160/229 (69%), Gaps = 18/229 (7%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIWS-KGETCK 237
+++E R LP K+ + + + NQV++ISGETGCGKTTQ+PQF+LE I S +G C
Sbjct: 255 KMLEFRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCN 314
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
I+CTQPRRISA +VAER+S ERGEN+G+++GYK+RLE GK + ++FCT+G+LLR L+S
Sbjct: 315 IICTQPRRISAMAVAERVSTERGENLGESVGYKVRLEGIKGKDTHLLFCTSGILLRRLLS 374
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+++ +TH+ VDEIHER DF+L +++D+L LRLILMSA
Sbjct: 375 D--------------RNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLSRRRDLRLILMSA 420
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL--SILKSAESNHLD 404
TL+A+ FS YFGG P I +PGFTYPV++ +LED+L + K SN LD
Sbjct: 421 TLNAELFSSYFGGAPTIHIPGFTYPVRAHFLEDILERTGYKLTSSNQLD 469
>gi|157382862|gb|ABV48866.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFCCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|396476414|ref|XP_003840017.1| similar to DEAD/DEAH box helicase [Leptosphaeria maculans JN3]
gi|312216588|emb|CBX96538.1| similar to DEAD/DEAH box helicase [Leptosphaeria maculans JN3]
Length = 1386
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 224/425 (52%), Gaps = 35/425 (8%)
Query: 543 IDLVLIEQLLRKI--CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
I+ LI + +R I + S+DGAIL+FLPG +I++T L P +PLH+
Sbjct: 847 INYDLIAETVRHIDRQLGSKDGAILIFLPGTMEIDRTIRALDQFP------NIYALPLHA 900
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ + QK+VF PP G RK+I +TN+AET+ITI+DVV VID+GR+KE SYD NV L
Sbjct: 901 SLLPIDQKRVFPPPPHGKRKVIAATNVAETSITIEDVVAVIDTGRVKETSYDAQLNVVRL 960
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
+W S+A+ KQR GRAGR + G CY LY++ + + PEI+R+P+E++CL +K +
Sbjct: 961 AETWASRAACKQRRGRAGRVRPGDCYKLYTRTAEEKMMERPEPEIRRVPLEQMCLNIKAM 1020
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
++ FL L PP S + AI L +GA++ D ++T LG + + +SK+
Sbjct: 1021 GIQ-DVSAFLASALTPPESTAVEGAIKQLSQMGAIT-DSELTALGRHMSMIPADLRLSKL 1078
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFE--LASLYGGQSDQLAV 838
L + CL+ +LT+A R PF ISP E+ + T +F+ AS GQ D L
Sbjct: 1079 LVYGATFGCLEASLTIASVLTARSPF---ISPRERDQGTRDEFDRLRASFSNGQGDLLVD 1135
Query: 839 IAAFECW-----KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----- 888
+ A+E W K R AW C ++ M + R Q + L + FI
Sbjct: 1136 LRAYEQWSALRSKGVSARDIRAW-CQDNRINPNTMFDIASNRSQYLSTLKEISFIHSNYH 1194
Query: 889 PEDVSSCS----HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPH 944
D SS HNA ++ A++ P +AR++ P K RF GA V L P
Sbjct: 1195 SNDTSSHGMYNKHNAN-DALLRALIAGSFNPQIARIQLPDK---RFAAGIAGA-VELDPE 1249
Query: 945 SLNFK 949
+ K
Sbjct: 1250 ARMIK 1254
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 138/225 (61%), Gaps = 20/225 (8%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
L++++ R LP ++ I TV+ QV +ISGETG GK+TQ QF+L+ + + G
Sbjct: 600 LQKMLNVRKNLPAWRLRENIVRTVNDCQVTIISGETGSGKSTQSVQFILDDLTERQLGAV 659
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRL 294
I+CTQPRRISA +A+R++ ER +GD IGY IR ESK ++ I F T GVLLR
Sbjct: 660 ANIICTQPRRISALGLADRVADERCSQVGDEIGYIIRGESKQKPGTTKITFVTTGVLLRR 719
Query: 295 LVSQGVSRLKEASNKPAKDDVSA----LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
L + G + +DDV A ++H++VDE+HER +DF L ++R +L L
Sbjct: 720 LQTSGGN----------EDDVVASLADVSHVVVDEVHERGLDTDFALVLLRQVLRRRKDL 769
Query: 351 RLILMSATLDADRFSQYF---GGCPVIQVPGFTYPVKSFYLEDVL 392
++ILMSATLDA+ F YF G +++ G T+PV +Y++DV+
Sbjct: 770 KVILMSATLDAEVFETYFRDVGPVGRVEIEGRTHPVTDYYIDDVV 814
>gi|255074097|ref|XP_002500723.1| predicted protein [Micromonas sp. RCC299]
gi|226515986|gb|ACO61981.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 694
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 237/456 (51%), Gaps = 46/456 (10%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
G++LVFLPGW++I + L + P + S +IPLHS VP +Q+ VF PPG K+
Sbjct: 256 GSVLVFLPGWDEIKEAMKTLESLPAEQYDS-LQVIPLHSQVPQEEQQLVFNPAPPGKIKV 314
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
IL+TNIAE+++TIDDV+ V+DSG ++E SY+P + +ST+ + S+ASA QR GRAGR
Sbjct: 315 ILATNIAESSVTIDDVLAVVDSGLVREMSYNPESAMSTMGTVSTSRASATQRTGRAGRVA 374
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVT 741
G+CY LYS+ ++P+ PEI+R +E CLQ + N ++ FL + +DPP + T
Sbjct: 375 PGVCYRLYSRAMFEAMPERPTPEIQRTALEATCLQTCSMT-NSGVQAFLAEAMDPPATET 433
Query: 742 IRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASD 801
+ A+ L+ +GA++ E +T LG L L + P +ML ++ CLDP LT A
Sbjct: 434 VTLAMERLKTLGAIA--EVLTPLGSLLSQLPLDPATGRMLIMGVVTQCLDPVLTAAACMS 491
Query: 802 YRDPFTLPIS-PNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR----GQEAW 856
RDPF +P +E +RA + + +SD LAV+ A+ W+ G W
Sbjct: 492 SRDPFIVPTGMRDEAQRARRS-------FSERSDHLAVLRAYAEWRAVLAEEGFDGACQW 544
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE--------------DVSSCSHNARVP 902
+ G+ N L +R QL EL++ G + D + H P
Sbjct: 545 ARDNFLSIQGLQN-LTSLRSQLLDELVRTGLVRRDDLGYDRRNRELRGDAAVNRHAGNEP 603
Query: 903 GIIHAVLMAGLYPMVARLRPPHKNG---RRFVETAGGAKVRLHPHSLNFKLS--FKKTDD 957
+ AVL GL +A R G R E AG LHP S++F + ++++
Sbjct: 604 -LTLAVLTTGLPGNLAARRSMAHFGVMRTRLEENAG-----LHPASVSFARAPPKRRSEL 657
Query: 958 CPL---MVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
L +Y E+ + +R+C+ V P L+L
Sbjct: 658 AALPQWFLYREMVL-SSQVFLRDCSAVNPEQLVLFG 692
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 118/191 (61%), Gaps = 18/191 (9%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVC 240
E R LPI+ K + + ++ VV++SG TG GK+TQ PQ++LE +G +I+
Sbjct: 3 ETRDALPIAKIKAELCEALRTSPVVVVSGGTGSGKSTQCPQYILEDAIKRGVGPDTRIIV 62
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH--SSIVFCTNGVLLRLLVSQ 298
TQPRRI+A SVAER++ ERGE G+++G+ +RL + +S+ F T GVLLR L+
Sbjct: 63 TQPRRIAAVSVAERVASERGERAGNSVGFSVRLHGCAPRDEGASVEFVTTGVLLRRLM-- 120
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
P VS H+++DE+HERD +DF+L ++R +L P LR++LMSAT
Sbjct: 121 ---------RDPGLRGVS---HVMIDEVHERDINTDFLLVLLRALLRKRPELRVVLMSAT 168
Query: 359 LDADRFSQYFG 369
LDA+ FS YF
Sbjct: 169 LDAESFSDYFA 179
>gi|355683896|gb|AER97227.1| DEAH box polypeptide 9 [Mustela putorius furo]
Length = 1056
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/442 (34%), Positives = 231/442 (52%), Gaps = 23/442 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 625 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 683
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 684 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 743
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 744 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 803
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 804 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 862
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 863 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 915
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 916 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 974
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 975 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1029
Query: 948 FKLSFKKTD-DCPLMVYDEITR 968
S + P V+ E R
Sbjct: 1030 CPFSSQDMKYPSPFFVFGEKIR 1051
Score = 216 bits (550), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 157/239 (65%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 360 QISMDLKNELMYQLEQDHDLPAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 419
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 420 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESV 479
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 480 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 523
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 524 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 582
>gi|403420397|emb|CCM07097.1| predicted protein [Fibroporia radiculosa]
Length = 1424
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 231/431 (53%), Gaps = 29/431 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKT----RDRLLANPFFRDTSKFVIIPL 598
I + L+ + + ++DG +LVFLPGW+DI R++ L F D+ KF I L
Sbjct: 780 IPIPLVALTVAHVLRKTDDGHVLVFLPGWDDIIAVQRFLREKELLGLNFNDSDKFRIHLL 839
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS +P V+Q+ +F PP G R+IIL+TNIAET++TI DVVYV+DS R+KE+ YDP ++S
Sbjct: 840 HSTIPVVEQQAIFDPPPQGIRRIILATNIAETSVTIPDVVYVVDSARVKEQRYDPERHIS 899
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
+L S+WV K++ QRAGRAGR ++G Y + + A +L Q+ E+KR+ + + + VK
Sbjct: 900 SLVSAWVGKSNLNQRAGRAGRHRSGEYYGILGRKFADNLHPHQMVEMKRVDLSNVVMHVK 959
Query: 719 LLD-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
L+ P +E+ L +T++PP + A+ LQ +GAL +T LG L L V M
Sbjct: 960 ALNFPGMTVEEVLAETIEPPSPDRVAAAMKALQMVGALDQGNDLTSLGRVLLQLPVDVQM 1019
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
+++ + CLD ALTLA RDPF P+ + K A A K S +SD LA
Sbjct: 1020 GRLVLYGSFFRCLDQALTLAAILTNRDPFVSPM--HLKAEANARKNSFTS-DDFRSDALA 1076
Query: 838 VIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS 894
+ A+ W +++G FC + F++ + M+ +++ + L G I DVS+
Sbjct: 1077 TLNAYNSWWELQRKGMYVAANKFCGENFLAKPTLLMIQKIKEHIMQSLYSIGII--DVSA 1134
Query: 895 CSH-----------NARVPGIIH-----AVLMAGLYPMVARLRPPHKNGRRFVETAGGAK 938
+ N VP ++ + ++A L + + + + G + TA
Sbjct: 1135 GGNVSIPAAPLRGGNFAVPPELNRNGGSSPVLAALIAIATQPKFALRTGEKTYRTATDKT 1194
Query: 939 VRLHPHSLNFK 949
+HP S+N +
Sbjct: 1195 AFIHPSSVNHR 1205
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE 234
D+ + + +R+ LP+ + D + + + V + TG GKTTQ+PQ +L+ + +GE
Sbjct: 490 DSRMSTMRAQRAALPVYTKSDDLLKHIRDHDVTICMAATGSGKTTQIPQLILDDMIDRGE 549
Query: 235 --TCKIVCTQPRRISATSVAERISVERGENI--GDNIGYKIRLESK-GGKHSSIVFCTNG 289
C IVCTQPRRI+A SVA+R++ ERGE + G +IGY++R ES +H S+ FCT G
Sbjct: 550 GAKCNIVCTQPRRIAAISVADRVAKERGEVVGKGSSIGYQVRFESNLPEEHGSVTFCTTG 609
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
+ L+ + S + P + +TH++VDE+HERD +D +L +++ +L
Sbjct: 610 IFLKRMQSALL------GGGPMGRSLDDVTHVLVDEVHERDVDTDLLLVVLKRLLAERKS 663
Query: 350 ----LRLILMSATLDADRFSQYFG---GCP--VIQVPGFTYPVKSFYLED 390
++++LMSAT+D F +YF G P VI++PG +PV+ YL+D
Sbjct: 664 RNKPIKIVLMSATIDPKLFQEYFRDEEGRPTEVIEIPGRAFPVEKHYLDD 713
>gi|390604779|gb|EIN14170.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1560
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 223/407 (54%), Gaps = 35/407 (8%)
Query: 505 ENQPEVAQIIKKHMENALSDS-----------MKQQLLDKYLATVN---PELIDLVLIEQ 550
+N+PE ++ E AL DS ++++ D AT+N LI LI +
Sbjct: 958 KNRPEWSE------ETALGDSDEDTAVQENIKLEKRYSDSTAATINLLDERLIPYDLIMR 1011
Query: 551 LLRKICMDSED-----GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSV 605
L+ +IC + D AIL+F+PG +I + D L A+ F ++FVI PLHS + S
Sbjct: 1012 LIERICFEDPDYSFYSSAILIFMPGLAEIRRLNDMLSAHRQF-GGAEFVIYPLHSTISSE 1070
Query: 606 QQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 665
Q VF PP G RKI+++TNIAET ITI D+ VID+G+ +E +D +S L +++
Sbjct: 1071 NQNAVFNVPPSGIRKIVIATNIAETGITIPDITCVIDTGKHREMRFDEKRQISHLVEAFI 1130
Query: 666 SKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPN- 723
+K++A QR GRAGR Q G+C+HL+++++ + + + +PE+ R+ + +L L++K++ N
Sbjct: 1131 AKSNAAQRRGRAGRVQHGLCFHLFTKVKHDTMMVEHPLPEMMRLSLSDLALRIKIMKVNL 1190
Query: 724 -CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+IE+ L + LDPP S+ I+ AI L ++ AL+ E++T +G L L + K L
Sbjct: 1191 GSSIENVLIRALDPPSSINIQRAISALVEVRALTPTEEITPMGRLLSKLPTDVHLGKFLL 1250
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
A L CLDPALT+A A + + PF P ++ A F + + SD L + F
Sbjct: 1251 VATLFRCLDPALTIAAALNSKSPFLTPFGHEDEAEARKNVFRIEN-----SDFLTLHNVF 1305
Query: 843 ECWKNAKQR-GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
W+ G FC Q F+S + + +R+Q LI + F+
Sbjct: 1306 SSWRRVSMGPGSAHKFCRQNFLSHQNLQQIEELRQQFLGYLIDSSFV 1352
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 151/218 (69%), Gaps = 13/218 (5%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
++ +R +LPI+ ++ I +T+DS+QV+++SGETGCGK+TQVP F+LE S+G+ CKI C
Sbjct: 723 MLAQRHQLPIAQYRQEILNTLDSSQVLVLSGETGCGKSTQVPSFILEDQLSQGKHCKIYC 782
Query: 241 TQPRRISATSVAERISVERGEN------IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A+R+S E G+ +G +GY IRLES K + + F T G+ LR+
Sbjct: 783 TEPRRISAISLAQRVSGELGDPPGSVGCVGSLVGYSIRLESNTSKTTRLAFVTYGIALRM 842
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L S + A D++ THI++DE+HER SDF+L ++R +L L++IL
Sbjct: 843 LESGSGEGGQGT----AFDEI---THIVIDEVHERSIESDFLLIVLRSLLQQRADLKVIL 895
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
MSAT+DA++ S YFGGCPV++VPG T+PV + YLED +
Sbjct: 896 MSATVDAEKISDYFGGCPVVKVPGRTFPVDTRYLEDAI 933
>gi|449551091|gb|EMD42055.1| hypothetical protein CERSUDRAFT_129393 [Ceriporiopsis subvermispora
B]
Length = 1099
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 231/425 (54%), Gaps = 34/425 (8%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL-ANPF----FRDTSKFVIIPLHSMV 602
+ +LRK +EDG +LVFLPGWE+I T+ L+ P F D+SK+ + LHS +
Sbjct: 457 VAHVLRK----TEDGHVLVFLPGWEEIVSTQKALMDGRPLLGINFSDSSKYSVHLLHSTI 512
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P +Q+ VF+ PPPG R+IIL+TNIAET++TI DVVYV+D+ R+KE+ YDP ++S+L S
Sbjct: 513 PVAEQQVVFEPPPPGIRRIILATNIAETSVTIPDVVYVVDTARVKEQRYDPQRHISSLIS 572
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD- 721
+WV ++ QRAGRAGR + G + + S+ A L Q E+KR+ + + + VK L+
Sbjct: 573 AWVGSSNLNQRAGRAGRHRPGEYFGILSRRHAELLHPHQTVEMKRVDLSNVVMHVKALNF 632
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
P ++E L++T++PP + A+ LQ +GAL + +T LG L L V + +++
Sbjct: 633 PGMSVEQVLRETIEPPDPDRVEAAMKSLQMVGALDEHQNLTSLGRVLLQLPVDVQLGRLV 692
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
+ CLD ALTLA R+PF ++P K A K + +SD LA + A
Sbjct: 693 LYGSFFRCLDQALTLAAILSNREPF---LAPPHLKTEAAFKKNSWTPEEFRSDVLATLRA 749
Query: 842 FECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS----- 893
+ W + G A FCS+ F+S + ++ ++K L L G I DVS
Sbjct: 750 YNAWSEIQSSGAYAAANRFCSENFLSKPTLLLIEKIKKHLLQSLYTAGVI--DVSAGGTA 807
Query: 894 ----SCSHNAR--VPGIIHA-----VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLH 942
S R +P ++A L+A L + ++ + ++ + TA V +H
Sbjct: 808 TGIPSGPRGGRDSIPSELNANGNSYALIAALITIASQPKYAIRSSDKAYRTAQDKMVMIH 867
Query: 943 PHSLN 947
P S+N
Sbjct: 868 PSSVN 872
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 149/264 (56%), Gaps = 28/264 (10%)
Query: 151 FCKPKMSKAEIAMKVESLTSRIEK---DANLRQIVEERSKLPISSFKDVITSTVDSNQVV 207
+ +P S+ + K E L R E+ D L +I R+ LP+ + + + + + V
Sbjct: 137 YTRPSASQEVLDSKSEDLKKRRERYHEDPALEKIRNTRALLPVFTKSEELLKHIRDHDVT 196
Query: 208 LISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENI-- 263
+ TG GKTTQ+PQ LL+ KG+ C IVCTQPRRI+A SVA R++ ERGE
Sbjct: 197 ICMAATGSGKTTQIPQLLLDEWIEKGDGAKCNIVCTQPRRIAAISVANRVAQERGEKSGK 256
Query: 264 GDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVS--QGVSRLKEASNKPAKDDVSALTH 320
G ++GY++R ES +H SI FCT G+ L+ + S QG E + + +D +TH
Sbjct: 257 GSSVGYQVRFESNLPDEHGSITFCTTGIFLKRMQSALQG-----ERAGRSLED----VTH 307
Query: 321 IIVDEIHERDRYSDFMLAIIR----DMLPSYPHLRLILMSATLDADRFSQYF---GGCP- 372
I+VDE+HERD +D +L +++ D ++++LMSAT+D F YF G P
Sbjct: 308 IVVDEVHERDVDTDLLLVVLKRLLADRKARNKPIKVVLMSATIDPTLFQNYFKDDAGKPA 367
Query: 373 -VIQVPGFTYPVKSFYLEDVLSIL 395
VI++PG +PV+ +++D + L
Sbjct: 368 DVIEIPGRAFPVQKNFMDDYIPAL 391
>gi|346321843|gb|EGX91442.1| DEAD/DEAH box helicase [Cordyceps militaris CM01]
Length = 1375
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 240/445 (53%), Gaps = 35/445 (7%)
Query: 522 LSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL 581
+ D + +++ K +N LI + ++ + ++ D G IL+FLPG +I + L
Sbjct: 817 IGDELMGKIIQKLGHRINYNLI-VEAVKAIDYELTYDKNRGGILIFLPGVGEIGQACRAL 875
Query: 582 LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
A P ++PLH+ + + +QK+VF P G RK++++TN+AET+ITIDD+V VI
Sbjct: 876 QAIPSLH------VLPLHASLETREQKRVFASAPHGKRKVVVATNVAETSITIDDIVAVI 929
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ 701
DSG++KE S+DP NN+ L+ +W S+A+ KQR GRAGR Q G CY LY+Q + +
Sbjct: 930 DSGKVKETSFDPGNNMRKLEETWASRAACKQRRGRAGRVQDGKCYKLYTQNLENQMAERP 989
Query: 702 VPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
PEI+R+P+E+LCL V+ + ++ FL ++ PP ++ I A+ +L+ +GAL DE +
Sbjct: 990 EPEIRRVPLEQLCLSVRAMGMR-DVARFLGRSPTPPEAMAIEGAMKLLRRMGALDGDE-L 1047
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T +G++L L K++ F + CLD +T+A R PF +SP +K+ AA
Sbjct: 1048 TAMGQQLAMLPADLRCGKLMVFGAIFGCLDDCVTVAAILSTRSPF---LSPQDKRE--AA 1102
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQ----RGQEAWFCSQYFVSSGVMNMLLGMRKQ 877
K + G D L +AA+ WK+ + Q FC F+S ++ + + Q
Sbjct: 1103 KEARMRFFAGDGDLLTDLAAYTEWKSLMRDRIPMKQVRAFCDDNFLSHLTLSDISNTKSQ 1162
Query: 878 LQTELIKNGFI-PEDVSSCSHNA------------RVPGIIHAVLMAGLYPMVARLRPPH 924
T L + G + P++ ++ + R ++ A++ + P +AR++ P
Sbjct: 1163 YYTALAEMGLVSPKEAAAAEEDTMASDTGGGGGGKRNSQLLRALIASAFTPQIARIQYPD 1222
Query: 925 KNGRRFVETAGGAKVRLHPHSLNFK 949
K +F + GA V L P + + K
Sbjct: 1223 K---KFASSMSGA-VELDPEARSIK 1243
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 161/283 (56%), Gaps = 23/283 (8%)
Query: 127 EPGEKLD-------ANQSRKSDKTRG-KRVDIFCKPKMSKAEIAMKVESLTSRIEKDANL 178
+PG+ +D A++ + D + KR+ P A+ A E+ R E A
Sbjct: 530 DPGKLVDISAVSSAASEQKPGDAVKSRKRMRTNAGPIRRNAD-ARSREAWIRRQEASA-Y 587
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETC 236
+ ++ +R KLP + I TV N V +ISGETG GK+TQ QF+L+ ++ +G
Sbjct: 588 KDMLSKRQKLPAWQMRQKIVQTVMDNHVTIISGETGSGKSTQSVQFILDDLYDQGLGNCA 647
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
++ TQPRRISA +A+R++ ER +G +GY IR ES+ + + I F T G+LLR L
Sbjct: 648 NMLVTQPRRISALGLADRVAEERCVRVGQEVGYAIRGESRQSRDTRITFMTTGILLRRLQ 707
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP-SYPHLRLILM 355
+ G R+++ A DVS H+IVDE+HER +DF+L +IR+++ L+LILM
Sbjct: 708 TSG-GRVEDVVASLA--DVS---HVIVDEVHERSLDTDFLLNLIREVMRIKKDALKLILM 761
Query: 356 SATLDADRFSQYFGG----CPVIQVPGFTYPVKSFYLEDVLSI 394
SATLDA F YF +++ G T+PV +F+L+DV+ +
Sbjct: 762 SATLDAASFINYFASEGLRVGAVEIEGRTFPVDNFFLDDVIRM 804
>gi|328714705|ref|XP_001943592.2| PREDICTED: ATP-dependent RNA helicase A-like protein-like
[Acyrthosiphon pisum]
Length = 1059
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 242/471 (51%), Gaps = 35/471 (7%)
Query: 535 LATVNPELIDLVLIEQLLRKICMD-SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+A ++ + +D +IE LL I ++ + GA+L+FLPGW I + L FF +SKF
Sbjct: 433 VAMISEKDVDFEIIEALLTHIEIEMNTPGAVLIFLPGWNLIFALQKYLTQKQFFA-SSKF 491
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
I+PLHS +P Q+KVF+ P G RK+ILSTNIAET+ITI+DVV+VI+ G+ K K +
Sbjct: 492 CILPLHSQIPCADQRKVFEPVPSGVRKVILSTNIAETSITINDVVFVINYGKAKIKLFTT 551
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+NN++ + W SK + +QR GRAGR + G C+HL S+ R + D PEI R P+ E+
Sbjct: 552 HNNMTHYATVWASKTNMQQRKGRAGRVRDGFCFHLCSKARYDKMDDHITPEIFRTPLHEI 611
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
L +KLL +I FL K ++PP + A ++L+++ L ++E++T LG L L +
Sbjct: 612 ALSIKLLRLG-DIGQFLSKAIEPPPIDAVIEAQVMLKEMKCLGINEELTPLGRILAKLPI 670
Query: 774 HPLMSKMLFFA-ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
P + +M+ ILM A+ A S+ D F +RA + G
Sbjct: 671 EPQIGRMMVLGNILMLGDALAIIAAICSNMTDIFVFDHRMTPAQRA----------FSGN 720
Query: 833 --SDQLAVIAAFECWKNAKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP 889
SD L V+ AF W++ R + +C + +S + + +QL+ IK GF
Sbjct: 721 RCSDHLTVLNAFHQWQSLVYRNIDTTEYCERKMLSQPSLTTTADVTEQLKDLFIKIGF-- 778
Query: 890 EDV----------SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKV 939
D+ + H+ + ++ A+L G YP V HK R+ T G A +
Sbjct: 779 PDICFERHRFDFGKTGMHDEPILDVVSAILTMGFYPNVCY----HKEKRKVYTTEGKAAL 834
Query: 940 RLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+H S+N + P V+ E R + + T+V P+ LLL
Sbjct: 835 -IHKTSVNCNNIMAGSFQSPFFVFAEKVRTR-AVSCKQMTMVTPIHLLLFG 883
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 150/228 (65%), Gaps = 19/228 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
++ ++ + RS+LP+ + KD I + N +V+I G TGCGKTTQV QF+L+
Sbjct: 175 KLNSSEGFKESIAMRSQLPVFAKKDNILDVIRKNSIVIIQGSTGCGKTTQVCQFILDEYL 234
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+G C I+CTQPR+ISA SVA+R++ ER E+IG ++GY +R +S + + +I+FCT
Sbjct: 235 KNDQGAYCNIICTQPRKISAISVADRVAFERKEDIGLSVGYSVRFDSIFPRPYGAILFCT 294
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L ++ + ++HIIVDEIHERD SDF++ +++DM+ +Y
Sbjct: 295 VGVLLRKL----------------ENGMRGISHIIVDEIHERDVNSDFLMVVLKDMVYNY 338
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
P LR+I MSAT++ D FS+YF CPVI V G YPVK ++LED++ +L
Sbjct: 339 PDLRVIFMSATINTDMFSKYFNCCPVIDVEGRCYPVKEYFLEDIVQVL 386
>gi|449662281|ref|XP_002164293.2| PREDICTED: ATP-dependent RNA helicase A-like protein-like [Hydra
magnipapillata]
Length = 1355
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 240/462 (51%), Gaps = 22/462 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A ++ I + LI LL I GA+L+FLPGW I K L + F + K++
Sbjct: 584 MAQISETEISIGLIVALLLHITSLENPGAVLIFLPGWNAIFKLLGHLQQHQVF-GSQKYL 642
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
+IPLHS +P Q KVFK P G +KIILSTNIAET+ITIDDVV+VID+ + K K + +
Sbjct: 643 LIPLHSQIPRADQAKVFKPAPHGVQKIILSTNIAETSITIDDVVFVIDACKAKVKQFTSH 702
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W S+++ QR GRAGR Q G C+HL S+ R L + +PEI R P+ L
Sbjct: 703 NNMNNYSTLWASQSNLDQRKGRAGRVQPGFCFHLISKARYQKLAKYMIPEILRTPLHILV 762
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL + D L K ++PP + +++ +L+++ AL +E +T LG L L +
Sbjct: 763 LSIKLLKLG-KVVDILNKAMEPPAMDAVFDSLELLKEMKALEENEILTPLGYILSKLPIE 821
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ +++ D TLA + + PF E K + A SD
Sbjct: 822 PKLGKMMVLGCILNVGDAVCTLAASMCFLGPFE---KSAESKNVEWVHKKFAG--SKNSD 876
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
LA++ A++ W++AK G E FC ++ V+ M ++QL+ L GF E +
Sbjct: 877 HLAMLWAYQQWEDAKAGGVPAEERFCRSNELNLQVLRMTSEAKQQLKELLCALGFPEESM 936
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
N R ++ AVL GLYP + H+ R+ + T G + +H S+
Sbjct: 937 LPHKFNYRGADDQLDLVTAVLCVGLYPNICM----HQEKRKVITTEGKYAL-IHKSSV-- 989
Query: 949 KLSFKKT-DDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
S +KT P ++ E R + ++ T++ P+ LL
Sbjct: 990 VCSNEKTFYPSPFFIFGEKNRTQ-VVCCKHLTMIYPVQYLLF 1030
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 158/224 (70%), Gaps = 19/224 (8%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSK 232
D++ ++E+R KLP+ +K I V+ NQVV+I G TGCGKTTQVPQ++L+ + S
Sbjct: 338 DSSFVSMLEQRKKLPVYKYKQQIIELVNENQVVIIRGATGCGKTTQVPQYILDDFILKSA 397
Query: 233 GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVL 291
G+ C IV TQPRRISATSVAER++ ER E +G++IGY +R +S + H SI+FCT GVL
Sbjct: 398 GDQCNIVVTQPRRISATSVAERVAAERSEFLGNSIGYSVRFDSILPRSHGSILFCTTGVL 457
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
LR + ++ ++ ++HI VDEIHERD SDF+L I+R+M+ +P+LR
Sbjct: 458 LRRM----------------ENGLTGISHIFVDEIHERDINSDFLLIILREMVSVFPNLR 501
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
+ILMSAT+D + FSQYF CPV+++ GF +PV+ ++LED++ ++
Sbjct: 502 IILMSATIDTNIFSQYFNNCPVLEIDGFLHPVQEYFLEDIIQLI 545
>gi|383854376|ref|XP_003702697.1| PREDICTED: dosage compensation regulator-like [Megachile rotundata]
Length = 1244
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 240/464 (51%), Gaps = 20/464 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A + + I LIE LL I GAIL+FLPGW I L +P + + +V
Sbjct: 624 MAQLTEKEISFELIEALLSYIKDQGIPGAILIFLPGWNLIFALMKHLQQHPIYGGVN-YV 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS +P Q+KVF G KIIL+TNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 IIPLHSQLPREDQRKVFDPVETGRTKIILATNIAETSITINDVVYVIDSCKAKMKLFTSH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R + + PE+ R P+ EL
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFNKMDEHMTPEMFRTPLHELA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL K ++PP + A ++L+++ L ++++T LG+ L L +
Sbjct: 803 LSIKLLRLG-SIGKFLSKAIEPPPIDAVIEAEVILREMKCLDKNDELTPLGKILARLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ + D AL+ A+ P + P+ ++ + K+ + Y SD
Sbjct: 862 PRLGKMMILGCMFRVGD-ALSTMAANSTTFPEVYNMGPDVRRLSAQQKWFAGARY---SD 917
Query: 835 QLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A++ AF+ W+ A+ G+ E FC +S + + + QLQ L GF E +
Sbjct: 918 HVAMLHAFQAWEEARAGGEYAEQTFCDSKNLSLPTLRVTWEAKNQLQALLQSAGFPQETL 977
Query: 893 SSCSHNARVPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
N + I A+L GLYP V HK R+ + T A + +H S+N
Sbjct: 978 CPTPLNYQAGADVRLDTITALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKTSVN 1032
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
+F++ P V+ E R + + T+V P+ LLL +
Sbjct: 1033 CS-NFEQNFPFPFFVFGEKIRTR-AVSCKQMTMVSPIHLLLFGS 1074
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 156/227 (68%), Gaps = 19/227 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R+++D NL+QI++ERS LP+ S K+ I S ++ N V++I G TGCGKTTQV QF+L+
Sbjct: 368 RLQQDENLQQIIKERSSLPVFSMKNEIMSAINENPVIIIRGNTGCGKTTQVCQFILDDYI 427
Query: 231 SKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+ G+ C + TQPRRISA SVA+R++ ER EN+G +IGY +R ES + + SI+FCT
Sbjct: 428 ASGQGAFCSVAITQPRRISAVSVADRVAAERRENLGQSIGYSVRFESCLPRPYGSILFCT 487
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L + + ++H+IVDEIHERD SDF++ ++RDM+ Y
Sbjct: 488 VGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHMY 531
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
P LR+ILMSAT+D FS YF CPVI++PG +YPV+ ++LED + +
Sbjct: 532 PDLRIILMSATIDTTLFSNYFNNCPVIEIPGRSYPVQQYFLEDCIQL 578
>gi|322705703|gb|EFY97287.1| DEAD/DEAH box helicase, putative [Metarhizium anisopliae ARSEF 23]
Length = 1518
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 217/393 (55%), Gaps = 23/393 (5%)
Query: 563 AILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
IL+FLPG +IN + L R + ++PLH+ + + +QK+VF +PPPG RK++
Sbjct: 844 GILIFLPGVGEINHACNHL------RSINSLHVLPLHASLETREQKRVFSKPPPGKRKVV 897
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQA 682
++TN+AET+ITIDD++ VIDSG++KE S+D NN+ L+ +W S+A+ KQR GRAGR Q
Sbjct: 898 VATNVAETSITIDDIIAVIDSGKVKETSFDAQNNMRKLEETWASRAACKQRRGRAGRVQE 957
Query: 683 GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTI 742
G CY LY++ + + PEI+R+P+E+LCL V+ + ++ FL ++ PP + I
Sbjct: 958 GRCYKLYTENLERQMAERPEPEIRRVPLEQLCLSVRAMGMR-DVARFLGRSPTPPDAKAI 1016
Query: 743 RNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDY 802
AI +L+ +GAL DE +T +G++L L K++ + + CLD +T+A
Sbjct: 1017 EGAIKLLRRMGALDGDE-LTAMGQQLAMLPADLRCGKLMVYGAIFGCLDDCVTIAAILST 1075
Query: 803 RDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW----KNAKQRGQEAWFC 858
R PF P E+ R +F + G D + + AF W K+ + Q FC
Sbjct: 1076 RSPFVSPQEKREESRQARMRF-----FSGNGDLITDMEAFREWDSMMKDRLPQRQVRAFC 1130
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS--SCSHNARVPGIIHAVLMAGLYPM 916
+ F+S ++ + R Q L + G P S + S+ R +I A++ + P
Sbjct: 1131 DENFLSYQTLSDISNTRSQYYEALNEIGLAPRFRSDAATSNPVRNVQLIRALIASAFTPQ 1190
Query: 917 VARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
+AR++ P K ++ + GA + L P + + K
Sbjct: 1191 IARIQYPDK---KYASSMSGA-MELDPEARSIK 1219
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/268 (39%), Positives = 158/268 (58%), Gaps = 25/268 (9%)
Query: 136 QSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKD 195
Q R++ +TR R + +K E + ES + + ++ +R +LP ++
Sbjct: 540 QGRRAKRTRSVRPINWVSDSKTKEEWLRRQES--------SAWKDMLSKRQRLPAWQMRE 591
Query: 196 VITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAE 253
I TV+ N V +ISGETG GK+TQ QF+L+ ++ KG ++ TQPRRISA +A+
Sbjct: 592 KIVKTVNDNHVTIISGETGSGKSTQSVQFILDDLYGKGVGGCANMIVTQPRRISALGLAD 651
Query: 254 RISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKD 313
R++ ER N+G +GY IR ES+ K + I F T GVLLR L + G R+++ A
Sbjct: 652 RVAEERCSNVGGEVGYIIRGESRQSKDTRITFVTAGVLLRRLQTSG-GRVEDVVASLA-- 708
Query: 314 DVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-LRLILMSATLDADRFSQYFG--- 369
DVS H+I+DE+HER +DF+L +IRD++ + L+LILMSATLDA F YF
Sbjct: 709 DVS---HVIIDEVHERSLDTDFLLNLIRDVMRTKKDMLKLILMSATLDASTFMDYFASEG 765
Query: 370 ---GCPVIQVPGFTYPVKSFYLEDVLSI 394
GC +++ G T+PV +YL+DV+ +
Sbjct: 766 LSVGC--VEIAGRTFPVDEYYLDDVVRM 791
>gi|393218367|gb|EJD03855.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 1430
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 193/349 (55%), Gaps = 13/349 (3%)
Query: 547 LIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
LI +L ++C D A LVF+PG +I + D L +P F + KF + PLHS +
Sbjct: 881 LIVCILERVCSDPILLDMSPAFLVFMPGLGEIRRLNDILSEHPLF-GSDKFQVFPLHSTI 939
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
S Q VF PPPG RKI+++TNIAET +TI D+ VIDSG+ +E +D +S L
Sbjct: 940 SSEDQSLVFDIPPPGIRKIVIATNIAETGVTIPDITCVIDSGKHREMRFDEKRQISRLIE 999
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
+++++++A QR GRAGR ++G+C+HL+S+ R S+ + +PE+ R+ + +L L++K+L
Sbjct: 1000 TFIARSNAAQRRGRAGRVRSGLCFHLFSKARHESMAEHPLPEMLRLSLSDLALRIKILKV 1059
Query: 723 N--CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
N +IED L LDPP S+ I+ A L ++GAL+ E +T +G L L + K
Sbjct: 1060 NLGSSIEDVLSNCLDPPSSINIQRAKNALIEVGALTTTEDITSMGRLLSKLPTDVHLGKF 1119
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ A CLDPALT+A + + PF P ++ KF G SD L +
Sbjct: 1120 MLIAASFRCLDPALTIAATLNSKSPFVTPFGLEQEADRAKKKF-----MTGDSDFLTLHN 1174
Query: 841 AFECWKNAKQR-GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
AF W+ A G FC Q F+S + + +R+Q L+ FI
Sbjct: 1175 AFASWRKASANPGFIRKFCRQNFLSQQNLQQIEELRQQFMGYLVDASFI 1223
Score = 204 bits (518), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 150/220 (68%), Gaps = 13/220 (5%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
++++++R+ LPI+S++ + ++ + V+++SGETGCGK+TQ+P F+LE S G CKI
Sbjct: 593 QEMLKQRNALPIASYRKTVIEMLEMSPVIVLSGETGCGKSTQLPSFILEDHLSNGRHCKI 652
Query: 239 VCTQPRRISATSVAERISVERGENIG------DNIGYKIRLESKGGKHSSIVFCTNGVLL 292
V T+PRRISA S+A+R+S E G++ G +GY IRLES+ K++ + F TNG+ L
Sbjct: 653 VVTEPRRISAISLAQRVSRELGDSPGAVGTSTSLVGYTIRLESQTSKNTRLNFVTNGIAL 712
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L S K A DDV THI+VDE+HER SDF+L +++ +L L++
Sbjct: 713 RMLEGGSSSDGKGT----AFDDV---THIVVDEVHERSIDSDFLLIVLKSLLQERRDLKV 765
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ILMSATLDA++ S YFGGCP IQVPG T+PV +LED L
Sbjct: 766 ILMSATLDAEKISNYFGGCPTIQVPGRTFPVDIRFLEDAL 805
>gi|342866455|gb|EGU72116.1| hypothetical protein FOXB_17360 [Fusarium oxysporum Fo5176]
Length = 1349
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 224/406 (55%), Gaps = 28/406 (6%)
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
++ + + G IL+FLPG +IN+ L A + ++PLH+ + + +QK+VF
Sbjct: 832 ELSYEKKPGGILIFLPGVGEINQACRALKA------INSLHVLPLHASLETREQKRVFSG 885
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PPG RK++++TN+AET+ITIDD+V V+DSG++KE S+D NN+ L+ +W S+A+ KQR
Sbjct: 886 APPGKRKVVVATNVAETSITIDDIVVVVDSGKVKETSFDVQNNMRKLEETWASRAACKQR 945
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGR Q G CY L++Q +P+ PEI+R+P+E+LCL V+ + ++ FL ++
Sbjct: 946 RGRAGRVQEGRCYKLFTQNLEQQMPERPEPEIRRVPLEQLCLSVRAMGMK-DVAGFLGRS 1004
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
PP + I A+ +L+ +GAL DE +T +G++L L K++ F + CLD
Sbjct: 1005 PTPPDATAIDGAMKLLRRMGALDGDE-LTAMGQQLAMLPADLRCGKLMVFGAIFGCLDDC 1063
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ--- 850
+T+A R PF +SP EK+ AK Y G D L + AF+ W Q
Sbjct: 1064 VTIAAILSTRSPF---VSPQEKR--DEAKEARMKFYRGDGDLLTDLQAFQEWDFMMQDHI 1118
Query: 851 --RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG----- 903
R +W C + F++ ++ + R Q T L + G + ++ +AR
Sbjct: 1119 PHRQIRSW-CEENFLNFQTLSDISNTRAQYYTALGEIGIVAPSEATIEAHARGASSDGSQ 1177
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
++ A++ A P +AR++ P K +F + GA V L P + + K
Sbjct: 1178 LLRALVAAAFTPQIARIQYPDK---KFASSMSGA-VELDPEARSIK 1219
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 160/266 (60%), Gaps = 17/266 (6%)
Query: 154 PKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
PKM K K R ++ ++L+ +V +R LP ++ I TV SN V +ISGET
Sbjct: 547 PKMIKWIKDEKSREQWLRRQESSSLKNMVSKRQGLPAWQMREAIIGTVRSNHVTIISGET 606
Query: 214 GCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
G GK+TQ QF+L+ ++++G ++ TQPRRISA +A+R++ ER +G+ +GY I
Sbjct: 607 GSGKSTQSMQFILDDLYAQGLGGCANMIVTQPRRISALGLADRVAEERCTRVGEEVGYAI 666
Query: 272 RLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
R ES+ K + I F T GVLLR L G R+++ A DVS H+++DE+HER
Sbjct: 667 RGESRRSKDTKITFVTTGVLLRRLQISG-GRVEDVVASLA--DVS---HVVIDEVHERSL 720
Query: 332 YSDFMLAIIRDMLPSYPH-LRLILMSATLDADRFSQYFG----GCPVIQVPGFTYPVKSF 386
+DF+L +IRD++ + L+LILMSATLDA F +YF +++ G T+PV +
Sbjct: 721 DTDFLLNLIRDVMKAKKDMLKLILMSATLDAATFKRYFASERLSVGTVEIAGRTFPVDEY 780
Query: 387 YLEDVLSI----LKSAESNHLDSASL 408
YL+DV+ + ++S++S + +L
Sbjct: 781 YLDDVIRMTAYGVESSDSEFISGEAL 806
>gi|336273383|ref|XP_003351446.1| hypothetical protein SMAC_07645 [Sordaria macrospora k-hell]
gi|380089243|emb|CCC12802.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1574
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 257/526 (48%), Gaps = 66/526 (12%)
Query: 506 NQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE----D 561
++PE+ Q +K + N +++ Q +D+Y ID LI QL+ I +
Sbjct: 907 SKPELIQSLKNY-SNRTRNTLAQ--IDEYQ-------IDFDLIVQLISTIATHPDYVDFS 956
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
AILVFLPG +I D LL + F D+ +++ PLHS + + Q+ F PPPG RKI
Sbjct: 957 KAILVFLPGIAEIRTLNDMLLGDKSFADS--WLVYPLHSTIATEDQEAAFLVPPPGLRKI 1014
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
+L+TNIAET ITI DV VID+G+ +E +D +S L +++S+A+AKQR GRAGR Q
Sbjct: 1015 VLATNIAETGITIPDVTCVIDTGKHREMRFDERRQLSRLIDTFISRANAKQRRGRAGRVQ 1074
Query: 682 AGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSV 740
G+C+H++++ R + + D Q PE+ R+ +++L ++VK+ IED L + LDPP +
Sbjct: 1075 EGLCFHMFTKHRHDNIMSDQQTPEMLRLSLQDLAIRVKICKIG-GIEDTLGEALDPPSAK 1133
Query: 741 TIRNAIIVLQDIGALSL-DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
IR AI L D+ AL+ E++T LG +L L + + K++ + CLD ALT+A
Sbjct: 1134 NIRRAIDALVDVRALTASSEELTPLGLQLARLPLDVFLGKLILLGAIFKCLDMALTVAAI 1193
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR----GQEA 855
+ PF P ++ F G SD L V A++ WK Q G E
Sbjct: 1194 LSSKSPFVAPFGQRQQANTVRMGFR-----KGDSDLLTVYNAYQSWKRVCQSSTSGGAEF 1248
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF---------------------------I 888
+C + F+S + + ++ QL + +GF +
Sbjct: 1249 QYCRKNFLSPQTLANIEDLKGQLLVSVADSGFLQLTTEERQVLNRLRFGGKRRHQIFFEV 1308
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
P+ V+ S N I +V+ YP + P G R V + LHP S+N
Sbjct: 1309 PQRVNINSDNEM---ICQSVIAWSFYPKLLVRDTPGSKGLRNV--GNNQNISLHPSSVN- 1362
Query: 949 KLSFKKTDDCPLMVYDEITRGDGGMH-VRNCTVVGPLPLLLLATEI 993
K ++ + Y I + G ++ T V P + LL ++
Sbjct: 1363 ----KGHNELKWLSYYNIMQTKGSVYNAHETTAVDPFAVALLCGDV 1404
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 147/222 (66%), Gaps = 20/222 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+Q++ R +LP+ F+ + TV+ QVV+I GETGCGK+TQVP FLLE KG CKI
Sbjct: 670 QQMLVSRMQLPMWQFRQQVVDTVEREQVVIICGETGCGKSTQVPSFLLEDQLLKGRNCKI 729
Query: 239 VCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A+R+S E GE GD +GY IRLE+ + + +V+ T G+++
Sbjct: 730 YCTEPRRISAISLAKRVSEEIGEGRGDLGTPRSLVGYSIRLEANTSRETRLVYATTGIVM 789
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L E SN D++ +TH+++DE+HER SDF+L +++ +L L++
Sbjct: 790 RML---------EGSN-----DLNEITHLVLDEVHERSIDSDFLLIVLKKLLARRKDLKV 835
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+LMSAT+DA+RFS Y GG PV+ VPG T+PVK YLED + +
Sbjct: 836 VLMSATVDAERFSNYLGGAPVLNVPGRTFPVKVAYLEDAVEL 877
>gi|328712008|ref|XP_001944312.2| PREDICTED: dosage compensation regulator-like [Acyrthosiphon pisum]
Length = 1430
Score = 231 bits (588), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 248/488 (50%), Gaps = 32/488 (6%)
Query: 517 HMENA---LSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE-DGAILVFLPGWE 572
H EN +SD ++ K +A ++ + +D +IE LL I + GA+L+FLPGW
Sbjct: 784 HEENCNLLVSDDYPPEVKSK-VALISEKYVDFEIIEALLTHIEIKMNIPGAVLIFLPGWT 842
Query: 573 DINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAI 632
I+ + L FF +SKF ++PLHS +P Q++VF+ P G RK+ILSTNIAET+I
Sbjct: 843 LISALQKYLTEKQFFA-SSKFCVLPLHSQLPCADQRRVFEPVPSGVRKVILSTNIAETSI 901
Query: 633 TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQL 692
TIDDVV+VI+ G+ K K + +NN++ + W SK + +QR GRAGR G C+HL ++
Sbjct: 902 TIDDVVFVINYGKAKIKFFTSHNNMTHYATVWASKTNMQQRKGRAGRVSDGFCFHLCTKA 961
Query: 693 RAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDI 752
R + D PE+ R P+ E+ L +KLL +I FL K ++PP + A+++L+++
Sbjct: 962 RYDKMDDHVTPEMFRSPLHEIALSIKLLRLG-DIGQFLSKAIEPPPIDAVNEALVMLKEM 1020
Query: 753 GALSLDEKVTELGEKLGCLSVHPLMSKMLFFA-ILMDCLDPALTLACASDYRDPFTLPIS 811
L ++E++T LG L L V P + +M+ ILM A+ A S+ D F
Sbjct: 1021 KCLGINEELTPLGRILAKLPVEPQIGRMMVLGNILMLGDAFAIIAAICSNMTDIFVFDHR 1080
Query: 812 PNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG-QEAWFCSQYFVSSGVMNM 870
+RA + SD LA++ AF+ W++ +C + +S +
Sbjct: 1081 MTPAQRAFSG--------NRCSDHLALLNAFQQWQSLDYCNINPTEYCERKMLSEPSLTT 1132
Query: 871 LLGMRKQLQTELIKNGFIPE--------DVSSCSHNARVPGIIHAVLMAGLYPMVARLRP 922
+QL+ IK GF PE D H+ + ++ A+L G YP V
Sbjct: 1133 TADAMEQLKDLFIKIGF-PEICFEKQRFDFGVEMHDDPLLDVVSAILTMGFYPNVCY--- 1188
Query: 923 PHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVG 982
HK R+ V T G +H S+N + + P V+ E R + + T+V
Sbjct: 1189 -HKVKRK-VYTTEGKFALIHKTSVNCNNTMDGSFQSPFFVFAEKVR-TTAVSCKQMTMVT 1245
Query: 983 PLPLLLLA 990
P+ LLL
Sbjct: 1246 PIHLLLFG 1253
Score = 203 bits (517), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 150/230 (65%), Gaps = 19/230 (8%)
Query: 169 TSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH 228
T ++ ++ +E RS+LP+ + K+ I + N +V+I G TGCGKTTQV QF+L+
Sbjct: 544 TKKLNSSKGFKESIEMRSQLPVFNKKNEILDIIRKNSIVIIQGSTGCGKTTQVCQFILDE 603
Query: 229 IWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS-SIVF 285
+G C I+CTQPR+ISA S+A+R++ ER E+IG ++GY +R +S + + +I+F
Sbjct: 604 YLKNDQGAYCNIICTQPRKISAISIADRVAFERKEDIGLSVGYSVRFDSIFPRSTGAILF 663
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT GVLLR L ++ + ++H+IVDEIHER SDF++ +++DM+
Sbjct: 664 CTVGVLLRKL----------------ENGMRGISHVIVDEIHERGVNSDFLMVVLKDMVY 707
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
+YP LR+I MSAT++ FS+YF CPVI + G YPVK ++LED++ +L
Sbjct: 708 NYPDLRVIFMSATINTAMFSKYFNCCPVIDIKGRCYPVKEYFLEDIVQVL 757
>gi|299755718|ref|XP_001828837.2| pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
[Coprinopsis cinerea okayama7#130]
gi|298411350|gb|EAU92844.2| pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
[Coprinopsis cinerea okayama7#130]
Length = 1456
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 235/446 (52%), Gaps = 43/446 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSED-----GAILVFLPGWEDINKTRDRLLANPFFRD 589
L ++ +I LI +LL ++C + D AILVF+PG +I + D L +P F
Sbjct: 897 LNLIDERVIPYDLILRLLEELCFGNPDYLTYSSAILVFMPGLGEIRRLHDMLSEHPQF-G 955
Query: 590 TSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
++ F + PLHS + S Q VF PPPG RKI+++TNIAET ITI D+ VIDSG+ +E
Sbjct: 956 SNDFRLYPLHSTLSSENQGAVFDVPPPGIRKIVIATNIAETGITIPDITCVIDSGKHREM 1015
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRI 708
+S L S+++K++A QR GRAGR Q G+C+HL++++R A + D +PE+ R+
Sbjct: 1016 RR--VRQISRLVESFIAKSNAAQRRGRAGRVQRGLCFHLFTKMRHDAQMADNPLPEMMRL 1073
Query: 709 PIEELCLQVKLLDPN--CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766
+ +L L++K++ +IED L + LDPP+++ ++ AI +L ++ AL+ + +T LG+
Sbjct: 1074 SLSDLALKIKIMKVKLGSSIEDVLSRALDPPIAINVQRAISMLVEVRALTPSQDITPLGQ 1133
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L + K L A + CLDPALT+A + + PF P+ ++ F +
Sbjct: 1134 LLSKLPTDVHLGKFLLVATVFRCLDPALTIAAVLNSKSPFVTPLGLEQEADRAKNSFRIE 1193
Query: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIK 884
+ SD L + A+ W+NA + FC ++S + + +R+Q L+
Sbjct: 1194 N-----SDFLTLHNAYSSWRNACNNPAVSIRKFCHTNYLSHQNLQQIEELRQQFLGFLVD 1248
Query: 885 NGFIPEDVSSCSH----------------------NARVPGIIHAVLMAGLYPMVARLRP 922
FI D S N++ +++A L+AGLYP V + P
Sbjct: 1249 MSFIRVDRSFVRELSRSRYNRNRTRFVNLPPEYDVNSKNFALVNAALVAGLYPKVLSIDP 1308
Query: 923 PHKNGRRFVETAGGAKVRLHPHSLNF 948
++G + + V HP S+NF
Sbjct: 1309 --RSG-QMKTISNNQAVSFHPSSVNF 1331
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 155/220 (70%), Gaps = 13/220 (5%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
++++ +R+ LPI+++++ I + ++S+QV+++SGETGCGK+TQVP F+LEH S+G+ C++
Sbjct: 619 QEMLAQRNSLPIAAYRETIINILESSQVLVLSGETGCGKSTQVPAFILEHSLSQGKPCRV 678
Query: 239 VCTQPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A+R+S E GE +G + +GY IRLES +++ + + TNG+ L
Sbjct: 679 YCTEPRRISAVSLAQRVSRELGEPANVVGTSNSLVGYSIRLESNISRNTRLAYVTNGIAL 738
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L +G S ASN +THII+DE+HER SDF+L +++ ++ P L++
Sbjct: 739 RML--EGGS----ASNGQGT-AFDEITHIIIDEVHERTIESDFLLIVLKSLIRERPDLKV 791
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
ILMSAT+DA++ S YF CP + VPG T+PV +LED +
Sbjct: 792 ILMSATVDAEKISDYFDRCPTLHVPGRTFPVDVRFLEDAV 831
>gi|319803056|ref|NP_001188373.1| ATP-dependent RNA helicase A [Danio rerio]
Length = 1270
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 165/247 (66%), Gaps = 22/247 (8%)
Query: 151 FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS 210
FC P+ ++ + L ++E+D NL+ I+ ERS+LP+ +F++ I ST+ +N VV+I
Sbjct: 361 FCTPEQISNDL---LNELNYQLEQDQNLQTILTERSQLPVKNFQEQIMSTIYNNPVVIIR 417
Query: 211 GETGCGKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIG 268
G TGCGKTTQVPQ++L+ G C IV TQPRRISA SVAER+S ERGE++G + G
Sbjct: 418 GATGCGKTTQVPQYILDEFIKGGRASDCNIVVTQPRRISAVSVAERVSFERGEDVGKSCG 477
Query: 269 YKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
Y +R ES + H+SI+FCT GVLLR L S + ++H+IVDEIH
Sbjct: 478 YSVRFESFLPRPHASILFCTVGVLLRKLES----------------GIRGISHVIVDEIH 521
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ERD +DF+L ++RD++ +YP +R+ILMSAT+D F +YF CPVI+V G +PV+ ++
Sbjct: 522 ERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGRAHPVQEYF 581
Query: 388 LEDVLSI 394
LED + +
Sbjct: 582 LEDCIQM 588
Score = 229 bits (583), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 245/480 (51%), Gaps = 22/480 (4%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSK 592
+ ++ +N + LIE LL+ I GA+LVFLPGW I + L NP F +
Sbjct: 628 RAMSQLNEKETSFELIEALLKYIETLEVPGAVLVFLPGWNLIYSMQKHLEMNPHF-GGHQ 686
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+ I+PLHS +P +Q++VF+ P G K+ILSTNIAET+ITI+DVV+V+DS + K K +
Sbjct: 687 YRILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFT 746
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEE 712
+NN++ + W SK + +QR GRAGR + G C+HL S+ R L PEI R P+ E
Sbjct: 747 SHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHE 806
Query: 713 LCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLS 772
+ L +KLL I +FL K ++PP + A L+++ AL ++++T LG L L
Sbjct: 807 VALSIKLLRLG-GIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLP 865
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
+ P + KM+ + + D T++ A+ + +PF +E KR A
Sbjct: 866 IEPRLGKMMIMGCIFNVGDAVCTISAATCFPEPFI-----SEGKRLGFVHRNFAG--SRF 918
Query: 833 SDQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
SD +A+++ F+ W + G++A FC ++ + M + QL+ L+ GF E
Sbjct: 919 SDHVALLSVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVGFPEE 978
Query: 891 DVSSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
+ + N P ++ ++L G YP V HK R+ + T G + +H S+
Sbjct: 979 CLLNQVFNNVGPDNNLDLVISLLTFGSYPNVCY----HKEKRKILTTEGRNAL-IHKSSV 1033
Query: 947 NFKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD 1005
N S P V+ E R + ++ T+V PL L+L ++ + E DD
Sbjct: 1034 NCPFSNHDLKYPSPFFVFGEKIRTR-AISAKSMTLVSPLQLILFGSKKITSNGEVVELDD 1092
>gi|256088038|ref|XP_002580167.1| ATP-dependent RNA Helicase [Schistosoma mansoni]
gi|353230139|emb|CCD76310.1| putative atp-dependent RNA helicase [Schistosoma mansoni]
Length = 1516
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/513 (30%), Positives = 264/513 (51%), Gaps = 47/513 (9%)
Query: 525 SMKQQLLDKY-LATVNPE---LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDR 580
+ + +LL Y LA N E ++D L+ L+ KI G IL+FLP +E+I R R
Sbjct: 752 NFRYKLLSSYQLARNNMEPETIVDHDLLTALIVKIDSSLPRGVILIFLPSYEEIMTLRGR 811
Query: 581 LLA--NPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVV 638
L+ N ++ K +I LH + K ++ + RK+ILS++IAE+++T DDVV
Sbjct: 812 LIDPDNSPWKSPEKPLIFILHPRMLVADLKTIYAQSSRSHRKLILSSSIAESSMTFDDVV 871
Query: 639 YVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLP 698
Y+ID G +Y ++L++ W+SK++A QR R G+ GIC+ LYS LR + LP
Sbjct: 872 YIIDCGL----NY----GTTSLRNQWISKSNAIQRKSRVGKNINGICFRLYSSLRYSFLP 923
Query: 699 DFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL 757
+ + + IEE+C+Q +LL P N ++ L PP + NAI L+++ L
Sbjct: 924 EERRGSLSGHVIEEMCIQARLLAPSNITLQTVLSALPKPPSPKSCENAIETLKEMDVLDT 983
Query: 758 DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR 817
E++TELG + + + P +KM+ F++++ CLDP LT+AC Y +PF LP + E+K
Sbjct: 984 FEELTELGYHICDMPIPPRYAKMVLFSVVLKCLDPILTIACILTYTEPFILPRNAAERKD 1043
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQ 877
+ L+S SD + ++ AF+ W+ ++ G E FC ++F+SS +++ +R Q
Sbjct: 1044 LMNIRRSLSS--NSYSDHMVLLRAFQFWQKSRSEGWEKAFCQKHFISSATFEVIIAIRTQ 1101
Query: 878 LQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVET 933
L +L +GF+ D+ + N+ ++ A ++AG+Y +A++ N +
Sbjct: 1102 LLGQLRASGFVKTKGSGDIRDLNSNSDNWAVVKAAIVAGMYGNLAQVD--RNNSCLRIVN 1159
Query: 934 AGGAKVRLHPHSL---NFKLSFKKTDD--CPLMVYDEI-TRGDGGMH------------- 974
V L P S+ N + +D C +V++E+ T D +H
Sbjct: 1160 GNSMPVVLDPQSVIATNANGAEMNVNDLPCDWLVFNEVLTLTDPKLHTSPESNNTDHLAL 1219
Query: 975 -----VRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
+R ++V P+ + L+ I V P + E
Sbjct: 1220 KKLKIIRCVSIVSPITVALMGGSIRVCPQIEKE 1252
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 82/135 (60%), Gaps = 13/135 (9%)
Query: 194 KDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAE 253
++ I ++SN + +ISG G GKTT +PQ L++ + +G C+I+C+QP R+ A A+
Sbjct: 93 REQIIHFINSNPITIISGPPGIGKTTYLPQILVDECYMQGHRCRIICSQPYRLYAHINAD 152
Query: 254 RISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKD 313
R+S RGE G +GY+IRLESK + + FCT+GVLLR + + R+
Sbjct: 153 RLSQIRGETTGQTVGYQIRLESKVSPKTLLTFCTHGVLLRTICAD--PRI---------- 200
Query: 314 DVSALTHIIVDEIHE 328
++ THIIVDEI +
Sbjct: 201 -MAGTTHIIVDEIED 214
>gi|291222158|ref|XP_002731085.1| PREDICTED: ATP-dependent RNA helicase A-like protein-like
[Saccoglossus kowalevskii]
Length = 1325
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 158/452 (34%), Positives = 235/452 (51%), Gaps = 24/452 (5%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
LIE LLR I GAILVFLPGW I L +P F + + I+PLHS +P
Sbjct: 665 LIESLLRYIKGLGVPGAILVFLPGWNLIFALMRHLQDHPEF-GSRNYCILPLHSQIPRED 723
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q +VF+ P G KIILSTNIAET+ITI+DVV+VIDS + K K + +NN++ + W S
Sbjct: 724 QHRVFEPVPEGVTKIILSTNIAETSITINDVVFVIDSCKAKMKLFTSHNNMTNYATVWAS 783
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
K + +QR GRAGR + G +HL S+LR L PEI R P+ EL L +KLL I
Sbjct: 784 KTNLEQRRGRAGRVRPGFAFHLCSRLRFEKLDTHSTPEILRTPLHELSLAIKLLRLG-GI 842
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL K ++PP + A ++L+D+ AL ++++T LG L L + P + K + A
Sbjct: 843 GPFLSKAIEPPPIDAVIEAEVLLKDMNALDANDELTPLGRILAKLPIEPRLGKTIVLACA 902
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
D ++A ++ + +PF + +R + A SD +A++ A++ W+
Sbjct: 903 FYLGDAVCSIAASTCFPEPFV-----TDARRLNWTHRQYAGTR--HSDHVAMLNAYQSWE 955
Query: 847 NAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED-VSSCSHNARVP- 902
+A+ G+ E FC +S + M + QL+ LI F PED V+ N P
Sbjct: 956 DARSYGEDSERRFCDSKSLSMPTLRMTAEAKNQLRDILISCDF-PEDCVAPQVFNFTGPD 1014
Query: 903 ---GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP 959
++ + + GLYP V HK+ R+ + T G A + +H HS+N + + P
Sbjct: 1015 SNLDVVITLFVLGLYPNVCI----HKDKRKVLTTEGKAAL-IHKHSVNCS-NRDQNFPSP 1068
Query: 960 LMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
V+ E R + + T+V P LLL +
Sbjct: 1069 FFVFGEKLRTR-AVSAKQMTMVTPFQLLLFGS 1099
Score = 214 bits (545), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 156/233 (66%), Gaps = 19/233 (8%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
+S ++ D +L++++ ER++LP+ I T++ N VV+I G TGCGKTTQVPQFL
Sbjct: 392 KSQQHQMATDKDLQKMLAERAELPVHDSLQNILETINRNPVVIIRGATGCGKTTQVPQFL 451
Query: 226 LEHI--WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SS 282
L+ + G C I+ TQPRRISA SVAER++ ERGE++G ++GY +R ES + +
Sbjct: 452 LDEMIKMGLGAYCNIIVTQPRRISAISVAERVANERGEHLGMSVGYSVRFESVLPRALGA 511
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
++FCT G LLR L + + ++H+I+DEIHERD +DF+L +IRD
Sbjct: 512 MLFCTVGTLLRKL----------------EAGLRGISHVIIDEIHERDINTDFLLVVIRD 555
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
M+ +YP +R++LMSAT+D FSQYFG CPV++V G T+PV+ +YLED + +L
Sbjct: 556 MVRAYPDMRVVLMSATIDTTMFSQYFGDCPVVEVHGRTHPVQEYYLEDCVQML 608
>gi|393244627|gb|EJD52139.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1461
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 226/437 (51%), Gaps = 47/437 (10%)
Query: 547 LIEQLLRKICMDSED-----GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
LI +LL +IC + + GAIL+F+PG +I K D L+ + F + F++ PLHS
Sbjct: 918 LIMRLLERICFEELEYQTLSGAILIFMPGLGEIRKMNDMLMEHRHFGNDG-FIVYPLHST 976
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+ S Q VF PPPG RKI+++TNIAET ITI D+ VID+G+ + ++ +S L
Sbjct: 977 ISSENQSAVFDIPPPGIRKIVIATNIAETGITIPDITCVIDTGKHR-GIFEISRQISRLV 1035
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEELCLQVKLL 720
+++++++A QR GRAGR Q+G+C+HL+++ R + D PE+ R+ + +L L++K++
Sbjct: 1036 DTFIARSNAAQRRGRAGRVQSGLCFHLFTKTRHDTQMADTPQPEMLRLSLSDLALRIKIM 1095
Query: 721 DPNC--NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
+ +IED L + +DPP V I+ AI L ++ AL+ E +T +G L L + +
Sbjct: 1096 NVKIGDSIEDVLSRAMDPPSQVNIQRAISSLVEVRALTASEDITPMGRLLSKLPIDVHLG 1155
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K L A L CLDPALT+A + + PF P E+ F++ + SD L +
Sbjct: 1156 KFLLTAALFGCLDPALTIAATLNAKSPFITPFGHEEEADRAKLGFKMEN-----SDFLTL 1210
Query: 839 IAAFECWKNA-KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI--------- 888
AF W+ A G FC ++S + + +R+QL LI + FI
Sbjct: 1211 HNAFASWRRACNTSGFARKFCRTNYLSHQNLQQIEELRQQLLGYLIDSSFINVERAYVKE 1270
Query: 889 ----------------PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE 932
PE++ NA +++A L+AGLYP + + R
Sbjct: 1271 LNRTRYGRNRGRFIYPPEEL---DRNANDFSLLNAALVAGLYPRIISIDATSGQLRTITN 1327
Query: 933 TAGGAKVRLHPHSLNFK 949
V HP S+NFK
Sbjct: 1328 N---QVVAFHPSSVNFK 1341
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 151/222 (68%), Gaps = 17/222 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ ++ +R++LPI+ ++ I T++ +QV+++SGETGCGK+TQ+P F+LE +G+ CKI
Sbjct: 631 QHMLAQRNQLPIAQYRQEIIQTLEQSQVLVLSGETGCGKSTQLPTFILEDHLERGQHCKI 690
Query: 239 VCTQPRRISATSVAERISVERGENIG------DNIGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A+R+S E G+ G +GY IRLES +++ + F TNG+ L
Sbjct: 691 YCTEPRRISAISLAQRVSQELGDAPGAVGTANSLVGYSIRLESNTHRNTRLAFVTNGIAL 750
Query: 293 RLLVSQGVSRLKEASNKPAKDDVS--ALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
R+L E + P + +THII+DE+HER SDF+L +++ ML P+L
Sbjct: 751 RML---------ENGSGPGGSGTAFDEITHIIIDEVHERSIESDFLLIVLKSMLQQRPNL 801
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+++LMSATL+A++ S +FGGCP++QVPG T+PV YLED +
Sbjct: 802 KVVLMSATLNAEKISDFFGGCPIMQVPGRTFPVDVRYLEDAI 843
>gi|303274897|ref|XP_003056759.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461111|gb|EEH58404.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 803
Score = 230 bits (587), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 174/501 (34%), Positives = 264/501 (52%), Gaps = 48/501 (9%)
Query: 530 LLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFR- 588
L + L+ ++ +ID +IE+LL I D+ GA+LVFLPG +++ DRL +NP F
Sbjct: 280 LTRRNLSRLDENVIDYDIIEKLLGVIDDDAPHGAVLVFLPGIGEVSGLIDRLASNPRFAP 339
Query: 589 DTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
K ++PLHS + +Q++ FK G RKI+++TN+AET++TI+DVV VIDSGR+KE
Sbjct: 340 RHGKHKLVPLHSALTPAEQREAFKTHAVGVRKIVVATNVAETSVTIEDVVVVIDSGRVKE 399
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA-SLPDFQVPEIKR 707
+ +D +++ WVS+A+A+QRAGRAGR +AG CY L++ RA QVPE+ R
Sbjct: 400 RQWDARRGMASSLEGWVSRAAARQRAGRAGRVRAGTCYALFTSHRARDGFRSHQVPEMHR 459
Query: 708 IPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE--KVTELG 765
+P+ E+ LQ+K LD + E FL +L+PP + A+ L+++GA+ E +T LG
Sbjct: 460 VPLTEIVLQIKKLDVDDGAEAFLAGSLEPPAPDAVVAALNTLREVGAVDASEAAALTPLG 519
Query: 766 EKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFT-----------LPISPNE 814
L L V ++KML + L+ CL P LT+A Y+ PFT
Sbjct: 520 HHLAALPVDCRVAKMLVYGALLSCLSPVLTIAACLSYKSPFTSGQGGKGGGGAAAGDAAR 579
Query: 815 KKRATAAKFELASLYGGQSDQLAVIAAFECW---KNAKQRGQEAWFCSQYFVSSGVMNML 871
++ + + LAS G QSD L AA+E W + R +++ + + +
Sbjct: 580 RQLSLPSSGCLAS--GEQSDHLVYAAAYENWAKVASVSDRNTARRHATKHGLCPETLKQI 637
Query: 872 LGMRKQLQTELIKNGFIPE--------------DVSSCSHNA---RVPGIIHAVLMAGLY 914
MR Q + L GFI D S S N R P ++ AV+ AGLY
Sbjct: 638 AEMRGQYASLLADIGFIAGSKGTRADASPSGWVDDPSASWNVDAKRAP-VVKAVVTAGLY 696
Query: 915 PMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH 974
+A +N R+ + G +V +HP S+N KL+ T P +V+ E + +
Sbjct: 697 ANIA----ATENTGRWRDAKG--EVGVHPSSVNAKLA---TPTFPFLVFHEKVK-TSRVF 746
Query: 975 VRNCTVVGPLPLLLLATEIAV 995
+R+ TVV P LLL + V
Sbjct: 747 LRDSTVVAPAALLLFGGAMDV 767
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 131/225 (58%), Gaps = 28/225 (12%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCTQ 242
R LP+++ +D + + ++ GETG GKTTQVPQ+LL+ G C+++CTQ
Sbjct: 8 RENLPVAALRDNLLRALRERDAAVVCGETGSGKTTQVPQYLLDDAVDAGAGAGCRVICTQ 67
Query: 243 PRRISATSVAERISVERGE-----NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVS 297
PRR++A +VAER++ ER E G +G+ +RL++ K + + F T G+LLR +
Sbjct: 68 PRRVAALTVAERVASERCERGGVGGKGSLVGHHVRLDAAVTKDTRLTFMTAGILLRRM-- 125
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH------LR 351
G L E S H+++DEIHER DF+LA++R LP+ L+
Sbjct: 126 HGDPLLAEVS------------HVVLDEIHERSLDGDFLLALLR-TLPARRRELGMAPLK 172
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LI+MSATLDA+ F Y CPV+Q G T+PV + YLED+ +L+
Sbjct: 173 LIVMSATLDANLFCGYLDDCPVVQAAGRTHPVSTVYLEDIHDMLE 217
>gi|225559471|gb|EEH07754.1| DEAH box polypeptide 36 [Ajellomyces capsulatus G186AR]
Length = 1454
Score = 230 bits (587), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 224/439 (51%), Gaps = 47/439 (10%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI LL I E AILVF+PG +I + D +L+ P F + S +VI L
Sbjct: 909 LDYKLIVSLLLAITTRKEFEQYSKAILVFMPGMAEIRRLNDEILSEPLF-NKSDWVIHAL 967
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 968 HSSIASEDQEKAFHIPPTGVRKIVIATNIAETGITIPDITAVIDTGKEKVMRFDEKRQLS 1027
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L S++++A+AKQR GRAGR Q G+C+HL+++ R L D Q PEI R+ +++L L+V
Sbjct: 1028 KLVESFIARANAKQRRGRAGRVQRGLCFHLFTKFRHDKLLADQQTPEILRLSLQDLILRV 1087
Query: 718 KLLDPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
K+ CN +E L + +DPP IR AI L+++ AL+ E +T LG L L +
Sbjct: 1088 KI----CNLGEVEQTLSEAIDPPSPKNIRRAIEALKEVKALTNSEDLTPLGRLLAKLPLD 1143
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ K++ + CLD A+++A + PF + N ++ F+ G SD
Sbjct: 1144 VFLGKLIIYGAFFKCLDSAVSIAAIVSSKSPFVNTVGSNTQRELAKLAFK-----RGNSD 1198
Query: 835 QLAVIAAFECWKNAKQR--GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
L V A+ WK + E FC + ++SS + + ++ QL T ++ +G + D
Sbjct: 1199 LLTVYNAYLSWKRHRSTPGMSEHAFCRKNYLSSQTLQNIEDVKMQLLTSIVDSGLLNLDP 1258
Query: 893 SSCSH--NARVPG--------------------IIHAVLMAGLYPMVARLRPPHKNGRRF 930
+ AR G I+++V+ YP + +NG+ +
Sbjct: 1259 AETDSLIRARFTGRQRQFFTVPKRMDINSENDIIVNSVIAWSFYPKLL-----IRNGKGW 1313
Query: 931 VETAGGAKVRLHPHSLNFK 949
A V LHP S+N K
Sbjct: 1314 RNVANNQTVSLHPTSVNKK 1332
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/255 (44%), Positives = 158/255 (61%), Gaps = 25/255 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LPI FKD I T+ SNQ ++I ETG GK+TQVP F+LE G CKI T+PR
Sbjct: 653 RKTLPIWQFKDQILDTLASNQAIIICSETGSGKSTQVPSFILEKELLSGRDCKIYVTEPR 712
Query: 245 RISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E GE+ +G N +GY IRLESK + ++F T GV++R+L
Sbjct: 713 RISAMSLAKRLSDELGEDKNAVGTNRSLVGYAIRLESKISSSTRLIFATTGVVVRML--- 769
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
+P D +TH+++DE+HER SDF+L I+R ++ P L+L+LMSAT
Sbjct: 770 ---------ERPR--DFEDITHLVLDEVHERTIDSDFLLIILRRLMQERPDLKLVLMSAT 818
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELT 418
+DA RFS+Y G PV+ +PG T+PV+ YLED + I K +N SA + ++D EL
Sbjct: 819 VDAARFSKYLHGAPVLDIPGRTFPVEVKYLEDAIEITKHCPNNDGLSA---LTDDDDELP 875
Query: 419 EE--NKSTLDEAISL 431
++ +K T D + SL
Sbjct: 876 DQSHDKPTGDLSSSL 890
>gi|261328587|emb|CBH11565.1| ATP-dependent DEAH-box RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1251
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 252/493 (51%), Gaps = 29/493 (5%)
Query: 520 NALSDSMKQQLLDKYLATVNPEL-------IDLVLIEQLLRKICMDSE--DGAILVFLPG 570
N D K+ + +K TV+ +L + ++ +L+ I S+ +ILVFLPG
Sbjct: 521 NNTEDMAKRSVYEKIKETVDTKLDFDSQAHVPYDIVVKLIGYIHRSSQHLSESILVFLPG 580
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W+ I++ + + + R+ S ++ LHS + + +Q++VF R P G RK++LSTNIAET
Sbjct: 581 WQAISRVANMIRMSNVSRELS---VLQLHSSLTAEEQQRVFYRAPKGYRKVVLSTNIAET 637
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITIDD+VYV+DS K SYDP N S L + ++S+A+ QR GRAGRC+ G+C HL
Sbjct: 638 SITIDDIVYVVDSCLTKVSSYDPAANTSALTAEFISRANGLQRRGRAGRCRPGVCIHLLP 697
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ +LP+F PEI R P+EE+CL K L P + L + LD P + ++A L+
Sbjct: 698 RSSYEALPEFLPPEIMRTPLEEVCLLAKALRPEETCVEVLSRALDVPSEYSTKHATNFLK 757
Query: 751 DIGALSLD-EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLP 809
DIGA + + E++T LG L L VHPL+ KML A LDP T+A + PF
Sbjct: 758 DIGAFTPEAEQLTSLGRALSRLPVHPLLGKMLLAAACFGVLDPVATIAAFLSGKSPFL-- 815
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMN 869
+PN+ R K A G SD ++V+ F+ WK + G + F V+
Sbjct: 816 NTPNQ--RGDLQKAVDAIDNGFLSDHMSVLKLFDGWKRS---GCSPEYAIHNFADQAVLR 870
Query: 870 MLLGMRKQL-----QTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARL--RP 922
+ + QL + L++ P +S H+ + G+I V++ LYP +A L R
Sbjct: 871 SISRTKNQLLRFVENSALLRRTKNPMKFAS-RHSDNL-GLIRLVVLWSLYPRIASLEYRS 928
Query: 923 PHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVG 982
G+ V +L S+ + K D + ++E + + + + T V
Sbjct: 929 KRSGGQPEVICWDDKHCQLAATSVLARKRQNKYGDRAFIFFNERMFLETNLTIFDATAVT 988
Query: 983 PLPLLLLATEIAV 995
P+ L L E+ V
Sbjct: 989 PVELALCLRELTV 1001
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 209/412 (50%), Gaps = 66/412 (16%)
Query: 48 TFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFS 107
+F LS R VH+ G+ +SSG +R +++ K K E ++G++ L +
Sbjct: 151 SFPPTLSAAGRQQVHKFAHTFGLFHESSGSQNERFLTLRKFNKTSE-EQGRQFL----IA 205
Query: 108 EGSKLVLQDL-FTHYPPDD-------------GEPGEKLDANQSRKSDKTRGKRVDIFCK 153
G ++ + PD+ G +++ + + ++ +G R +
Sbjct: 206 NGVRVRTEGYQGAQRLPDEYIRPKVSNINLLVGPLLKRMFRDLKLRGEQRQGGRQLTVVQ 265
Query: 154 PKMSKAEIAMKVESLTSRIEKD--ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISG 211
P + TS++ + A L++ R+ LP + I + V + +V+ISG
Sbjct: 266 PGLGNVP--------TSKVPRHRYAELQRF---RATLPAFRQQGAILNAVKISDIVVISG 314
Query: 212 ETGCGKTTQVPQFLLEH-IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYK 270
+TGCGKTTQ+PQ L + I++K +IVCTQPRR+SA SVA+R+S ERGE G++ GY
Sbjct: 315 DTGCGKTTQIPQMLYDAGIFNK--DLQIVCTQPRRVSALSVAQRVSEERGEACGNSCGYI 372
Query: 271 IRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
IR ++ + IV+ T G+LLR RL+ P DVS L IVDE+HERD
Sbjct: 373 IRFDNITSSETRIVYMTTGILLR--------RLR---TDPQLSDVSCL---IVDEVHERD 418
Query: 331 RYSDFMLAIIRDML-------PSYP-HLRLILMSATLDADRFSQYFGGC------PVIQV 376
+DF L ++RD + +Y H+++++MSAT+ ++ YF G PVI++
Sbjct: 419 VETDFCLLLLRDRIIDQRRNPGAYANHIKVVVMSATIQVEKIISYFSGVTVGETIPVIKI 478
Query: 377 PGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEA 428
PG +PV+ Y+EDVL L+ S AS+ +PN + +T D A
Sbjct: 479 PGTLHPVRECYMEDVLQWLQMPLST---LASMKLPNNALSMQSTGNNTEDMA 527
>gi|342186291|emb|CCC95777.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1300
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 263/499 (52%), Gaps = 65/499 (13%)
Query: 535 LATVNPELIDLVLIEQLLRKI-CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
L+ +NP++I+ LIE ++ I + GAILVFLPG +I ++L +NP R +
Sbjct: 663 LSRMNPDVINYELIESIVVYIDTVMQTRGAILVFLPGMAEITLCVEQLKSNP--RLFNSC 720
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS + S +Q+ VF+RPP G RK+++ TNI ET+ITIDD V+VIDSG+++E YD
Sbjct: 721 LIYNLHSSLGSAEQQGVFQRPPKGKRKVVVGTNIMETSITIDDAVFVIDSGKVRENRYDA 780
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
++S L + SKA+ +QR GRAGR + G C+ L++ ++ L D Q+ E+ R+P+E L
Sbjct: 781 RKSLSQLVTVKTSKANCRQRQGRAGRVREGFCFRLFTSVQFEELDDHQLCEMHRVPLESL 840
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ+ L+ +E +L+K L PP +R+ + L +GAL++D+++T LG+ L L +
Sbjct: 841 ILQIYSLNLGDEVE-YLRKALSPPDERVVRSGVKALTVLGALTMDKRLTSLGQHLANLPL 899
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA------S 827
+ KM+ ++ C+DP LT+A R PF +AA +++ +
Sbjct: 900 DVRIGKMVIHGAILQCVDPVLTIAACLAVRTPFL-----------SAADYQVEVEGIRRA 948
Query: 828 LYGGQ-SDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQLQTELI 883
L GG SD L+ A+ W + A C +Y++S + + ++Q + L
Sbjct: 949 LSGGYVSDHLSSWFAYAKWVQVMHKEGPAAANKLCMKYYLSMPALRQIQATKQQYERFLC 1008
Query: 884 KNGFI-----PEDV--------------------SSCSHNARVPGIIHAVLMAGLYPMVA 918
+ G I P S + N+ I + ++AGLYP VA
Sbjct: 1009 EAGLIECSTVPRGTRRFLYDPVVTLDDCVYESGGSRFNTNSGNVKCILSCIVAGLYPNVA 1068
Query: 919 RLRPPHKNG------RRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVY-DEITRGDG 971
+++ K+G R + T GA+ +HP S+ + +KT PL+VY D++ D
Sbjct: 1069 QVK---KSGGAKGCTRVILRTFDGAEAFIHPSSVAGR---EKTLASPLLVYVDKLKTSD- 1121
Query: 972 GMHVRNCTVVGPLPLLLLA 990
+ +R ++V PL ++
Sbjct: 1122 -IFLREVSMVMPLHIIFFG 1139
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 147/233 (63%), Gaps = 18/233 (7%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
E L EK + + E R LP ++ + V S++VV++SGETG GKTTQVPQ+L
Sbjct: 383 ECLKKEWEKLKSNGTLRESREGLPAFKMREELRRVVSSHRVVVVSGETGSGKTTQVPQYL 442
Query: 226 LEHIW--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSI 283
E + +G + IVCTQPRR++ATSVA R++ ER E +G +GY IRLE+ K + I
Sbjct: 443 YEFMCEEGRGSSANIVCTQPRRLAATSVALRVAGERDEPVGGVVGYTIRLENCVSKRTQI 502
Query: 284 VFCTNGVLLRLL-VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
+CT G+LLR + V + + R+ +HI+VDEIHER +D +L ++RD
Sbjct: 503 TYCTTGILLRRMQVDKFLGRI---------------SHIVVDEIHERGVDTDVLLILLRD 547
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
+L L ++LMSAT+D++ F+ YFGG P+I + G T+PV+ F+LE+++ ++
Sbjct: 548 LLERRDDLTVVLMSATMDSELFAHYFGGSPIINISGRTFPVQVFHLEEIIPMV 600
>gi|195475660|ref|XP_002090102.1| GE19435 [Drosophila yakuba]
gi|194176203|gb|EDW89814.1| GE19435 [Drosophila yakuba]
Length = 1283
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 253/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 613 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNISGAILVFLPGWNLIFALMK 672
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 673 FLQNTNTFSDTSQYRILPCHSQIPRDDQRKVFEPVPEGITKIILSTNIAETSITIDDIVF 732
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 733 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFEALED 792
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL I FL K L+PP + A ++L+++ L ++
Sbjct: 793 TLTPEMFRTPLHEMALTIKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 851
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 852 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 909
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 910 NHQK----ALSGSKCSDHVAMIVASQMWRREKQRGEQMEARFCDWKGLQMSTMNVIWDAK 965
Query: 876 KQLQTELIKNGF-----IPEDV-SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF IP ++ S + V + A+L GLYP + HK R+
Sbjct: 966 QQLLDLLQQAGFPEECMIPHELDEKNSGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1021
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL +LL
Sbjct: 1022 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVLLF 1078
Query: 990 AT 991
+
Sbjct: 1079 GS 1080
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 160/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
E++M E SL R + D R+ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 ELSMDYERSLRERRQNDNEYRKFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L I+RDM+ +YP L +ILMSAT+D FS+YFG CPV++VPG +PV+ F+LED+L +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTLFSKYFGCCPVLEVPGRAFPVQQFFLEDILQM 577
>gi|72389805|ref|XP_845197.1| ATP-dependent DEAH-box RNA helicase [Trypanosoma brucei TREU927]
gi|62360056|gb|AAX80478.1| ATP-dependent DEAH-box RNA helicase, putative [Trypanosoma brucei]
gi|70801732|gb|AAZ11638.1| ATP-dependent DEAH-box RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1251
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 230/441 (52%), Gaps = 20/441 (4%)
Query: 563 AILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKII 622
+ILVFLPGW+ I++ + + + R+ S ++ LHS + + +Q++VF R P G RK++
Sbjct: 573 SILVFLPGWQAISRVANMIRMSNVSRELS---VLQLHSSLTAEEQRRVFYRAPKGYRKVV 629
Query: 623 LSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQA 682
LSTNIAET+ITIDD+VYV+DS K SYDP N S L + ++S+A+ QR GRAGRC+
Sbjct: 630 LSTNIAETSITIDDIVYVVDSCLTKVSSYDPAANTSALTAEFISRANGLQRRGRAGRCRP 689
Query: 683 GICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTI 742
G+C HL + +LP+F PEI R P+EE+CL K L P + L + LD P +
Sbjct: 690 GVCIHLLPRSSYEALPEFLPPEIMRTPLEEVCLLAKALRPEETCVEVLSRALDVPSEYST 749
Query: 743 RNAIIVLQDIGALSLD-EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASD 801
++A L+DIGA + + E++T LG L L VHPL+ KML A LDP T+A
Sbjct: 750 KHATNFLKDIGAFTPEAEQLTSLGRALSRLPVHPLLGKMLLAAACFGVLDPVATIAAFLS 809
Query: 802 YRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQY 861
+ PF +PN+ R K A G SD ++V+ F+ WK + G +
Sbjct: 810 GKSPFL--NTPNQ--RGDLQKAVDAIDNGFLSDHMSVLKLFDGWKRS---GCSPEYAIHN 862
Query: 862 FVSSGVMNMLLGMRKQL-----QTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPM 916
F V+ + + QL + L++ P V S ++ G+I V++ LYP
Sbjct: 863 FADQAVLRSISRTKNQLLRFVENSALLRRTKNP--VKFASRHSDNLGLIRLVVLWSLYPR 920
Query: 917 VARL--RPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH 974
+A L R G+ + +L S+ + K D + ++E + +
Sbjct: 921 IASLEYRSKRSGGQPEIICWDDKHCQLAATSVLARKRQNKYGDRAFIFFNERMFLETNLT 980
Query: 975 VRNCTVVGPLPLLLLATEIAV 995
+ + T V P+ L L E+ V
Sbjct: 981 IFDATAVTPVELALCLRELTV 1001
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 208/412 (50%), Gaps = 66/412 (16%)
Query: 48 TFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFS 107
+F LS R VH+ G+ KSSG +R +++ K K E ++G++ L +
Sbjct: 151 SFPPTLSAAGRQQVHKFAHTFGLFHKSSGSQNERFLTLRKFNKTSE-EQGRQFL----IA 205
Query: 108 EGSKLVLQDL-FTHYPPDD-------------GEPGEKLDANQSRKSDKTRGKRVDIFCK 153
G ++ + PD+ G +++ + + ++ +G R +
Sbjct: 206 NGVRVRTEGYQGAQRLPDEYIRPKVSNINLLVGPLLKRMFRDLKLRGEQRQGGRQLTVVQ 265
Query: 154 PKMSKAEIAMKVESLTSRIEKD--ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISG 211
P + TS++ + A L++ R LP + I + V + +V+ISG
Sbjct: 266 PGLGNVP--------TSKVPRHRYAELQRF---RVTLPAFRQQGAILNAVKISDIVVISG 314
Query: 212 ETGCGKTTQVPQFLLEH-IWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYK 270
+TGCGKTTQ+PQ L + I++K +IVCTQPRR+SA SVA+R+S ERGE G++ GY
Sbjct: 315 DTGCGKTTQIPQMLYDAGIFNK--DLQIVCTQPRRVSALSVAQRVSEERGEACGNSCGYI 372
Query: 271 IRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
IR ++ + IV+ T G+LLR RL+ P DVS L IVDE+HERD
Sbjct: 373 IRFDNITSSETRIVYMTTGILLR--------RLR---TDPQLSDVSCL---IVDEVHERD 418
Query: 331 RYSDFMLAIIRDML-------PSYP-HLRLILMSATLDADRFSQYFGGC------PVIQV 376
+DF L ++RD + +Y H+++++MSAT+ ++ YF G PVI++
Sbjct: 419 VETDFCLLLLRDRIIDQRRNPGAYANHIKVVVMSATIQVEKIISYFSGVTVGETIPVIKI 478
Query: 377 PGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEA 428
PG +PV+ Y+EDVL L+ S AS+ +PN + +T D A
Sbjct: 479 PGTLHPVRECYMEDVLQWLQMPLST---LASMKLPNNALSMQSTGNNTEDMA 527
>gi|110331963|gb|ABG67087.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Bos taurus]
Length = 459
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 208/331 (62%), Gaps = 20/331 (6%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 129 KLKARRSRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYQGVSKSVIKTMS 188
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 189 VMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 248
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 249 RCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 308
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 309 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 368
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE +T LG L
Sbjct: 369 EQLCLRIKILEMFSTHNLQSVFARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHL 428
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
L V + K++ F + CLDPALT+A A
Sbjct: 429 ASLPVDVRIGKLMLFGSIFRCLDPALTIADA 459
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 79/116 (68%), Gaps = 14/116 (12%)
Query: 281 SSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII 340
+ +++CT GVLLR L +G + L+ +THIIVDE+HER SDF+L ++
Sbjct: 8 TRLLYCTTGVLLRRL--EGDTALQ------------GVTHIIVDEVHERTEESDFLLLVL 53
Query: 341 RDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+D++ P L++ILMSATL+A+ FS+YF CPVI +PG T+PV F+LED +++ +
Sbjct: 54 KDIVLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 109
>gi|346974552|gb|EGY18004.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
[Verticillium dahliae VdLs.17]
Length = 1357
Score = 230 bits (586), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/450 (32%), Positives = 242/450 (53%), Gaps = 47/450 (10%)
Query: 510 VAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLP 569
+ Q I+K L + LL++ ++T++ EL ++G ILVFLP
Sbjct: 815 LGQTIQK-----LGHRINYSLLNETISTIDLEL-------------SYQEKEGGILVFLP 856
Query: 570 GWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAE 629
G +I++T L +N S ++PLH+ + + +QK+VF R PPG RK++++TN+AE
Sbjct: 857 GVAEISQTCRALSSN------SSLHVLPLHASLETREQKRVFARAPPGKRKVVVATNVAE 910
Query: 630 TAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY 689
T+ITIDD+V V+DSG++KE +YD NN+ L+ W S+A+ KQR GRAGR QAG CY LY
Sbjct: 911 TSITIDDIVAVVDSGKVKETTYDAQNNMRKLEEMWASRAACKQRRGRAGRVQAGKCYKLY 970
Query: 690 SQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVL 749
++ + + PEI+R+P+E++CL V+ + ++ FL ++ PP S + AI +L
Sbjct: 971 TRNLEMQMAERPEPEIRRVPLEQMCLSVRAMGMR-DVAAFLGRSPTPPASTAVDGAIKML 1029
Query: 750 QDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLP 809
+ +GAL DE +T LG++L + +K++ + + CLD +T++ R PF P
Sbjct: 1030 RRMGALDGDE-LTALGQQLAMIPADLRCAKLMVYGSIFGCLDDCVTISAILSTRSPFLSP 1088
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG----QEAWFCSQYFVSS 865
P+++ A A+ G D L +AA++ W + K+ G Q FC F+S
Sbjct: 1089 --PDKRDLAKEARMRFEQ---GDGDLLTDLAAYKEWDSMKRNGTPPRQLRNFCDDNFLSY 1143
Query: 866 GVMNMLLGMRKQLQTELIKNGFI------PEDVSSCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + R+Q L + G E +S + +R+ ++ A+ + P +AR
Sbjct: 1144 LTLTDISATRQQFYGALGEMGVAFDHETRGEAPASQGYASRI--MLRALTASAFSPQIAR 1201
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
++ P K +F + GA V L P + K
Sbjct: 1202 IQFPDK---KFANSMSGA-VELDPEARAIK 1227
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 176/313 (56%), Gaps = 35/313 (11%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETC 236
++++ +R LP + I TV N V +ISGETG GK+TQ QFLL+ ++++G +
Sbjct: 584 KKMMAKRQSLPAWQVHEKIIQTVAQNHVTIISGETGSGKSTQSVQFLLDDLYNQGLGTSA 643
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
++ TQPRRISA +A+R++ ER +GD IGY IR ESK + + I F T GVLLR L
Sbjct: 644 NMLVTQPRRISALGLADRVAEERCSRVGDEIGYTIRGESKRSQQTRITFVTTGVLLRRLQ 703
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-LRLILM 355
+ G R+++ A DVS HI++DE+HER +DF+L I+R+++ + L+L+LM
Sbjct: 704 TSG-GRVEDVIASLA--DVS---HIVIDEVHERSLDTDFLLTIVREVMSTRKDLLKLVLM 757
Query: 356 SATLDADRFSQYFGG----CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVP 411
SATLDA F YF ++++ G TYPV+ +Y++D++S + +++ DS S +
Sbjct: 758 SATLDAASFENYFRSQGLRVGLVEIEGRTYPVEDYYMDDIIS-MTGFKADAYDSRSETLG 816
Query: 412 NEDPELTEE-NKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLA 470
+L N S L+E IS + LEL +YQ G+ L+ L
Sbjct: 817 QTIQKLGHRINYSLLNETIS--------TIDLEL----------SYQEKEGGI--LVFLP 856
Query: 471 GKGRVGDVCMLLS 483
G + C LS
Sbjct: 857 GVAEISQTCRALS 869
>gi|298709012|emb|CBJ30963.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1403
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 161/247 (65%), Gaps = 16/247 (6%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S E ++ +E A RQ++ +R LP ++ I T+ NQVV++SGETGC
Sbjct: 479 VSDKEAGKRMMDKRREVESTAQSRQMMAQRRNLPAYLQREDIVKTIRDNQVVVLSGETGC 538
Query: 216 GKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQF+L+ + +GE C I+CTQPRRISA VA+R++ ER E +G +GY+IRL
Sbjct: 539 GKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCERVGGTVGYQIRL 598
Query: 274 ESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
+S+ G + + FCT G+LLR L S D ++ ++H++VDE+HERD +
Sbjct: 599 DSRVGPSTRLTFCTTGILLRRLTSD--------------DTLAGVSHVMVDEVHERDLQT 644
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
DF+L I+RD+LP P LR++LMSATL AD F++YF CP I VPG T+PV+ Y+++V
Sbjct: 645 DFLLVILRDLLPKRPDLRVVLMSATLQADLFTKYFHDCPAITVPGRTFPVEVTYMDEVNR 704
Query: 394 ILKSAES 400
+++ +
Sbjct: 705 LVRGTRT 711
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 259/541 (47%), Gaps = 84/541 (15%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
GAIL+FLPG+ +I++ L +P ++ + PLHS +PS QQK +F+R P G RKI
Sbjct: 902 GAILIFLPGFAEIDQLVKALQRHPRIGRGAR--VFPLHSSLPSNQQKSIFQRMPAGVRKI 959
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
++STNIAET++TIDD +VID+GR++E YDP +S L W+SKAS QRAGRAGR +
Sbjct: 960 VVSTNIAETSVTIDDCTHVIDAGRVREMRYDPLTRMSCLVEVWISKASGSQRAGRAGRVR 1019
Query: 682 AGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSV 740
AG C+ LY + + +P + E+ R P+EEL LQV LL+ E FL + ++PP
Sbjct: 1020 AGKCWRLYPEAFHQSYMPTHTLAEMLRTPLEELVLQVLLLELGSPAE-FLDRAVEPPPPK 1078
Query: 741 TIRNAIIVLQDIGALSLDEK---VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
+R A+ L D+ A+ + +T LG L L + + K+L A ++ CLDP LT+A
Sbjct: 1079 MLRAALRNLDDLQAIIISNSTPILTPLGYHLAHLPMDACVGKLLLIAAILQCLDPILTIA 1138
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG---QE 854
A + PF P E+ RA A+ A G+SD LA++ AF W+N ++ +
Sbjct: 1139 AALSDKAPFQRPF--GEQARADKARQGFAQ---GKSDHLAIVEAFGAWRNKRRTSSYDEV 1193
Query: 855 AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLY 914
+C + F+S + G+ +D S N ++ +VL+AGLY
Sbjct: 1194 RRWCREKFLSQPTLESGPGL---------------QDPDLNSGNT---ALVQSVLVAGLY 1235
Query: 915 PMVARLRPPHKNGR--------RFVETAGGAKVRLHPHSLNFK--LSFKKTDDCPLMVYD 964
P VA P ++ R FV V +HP S+N + S ++ +VY
Sbjct: 1236 PHVAAFVRPDRHSRTPRQIKKGHFVTRDDSEPVFMHPSSVNHERFASAAESGRQVWVVYH 1295
Query: 965 EITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDC 1024
+ +++ + T P L+L +
Sbjct: 1296 SKMKTK-QVYLHDSTYATPFSLMLWGARV------------------------------- 1323
Query: 1025 MEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTH 1084
+H + ++V VV+DRWL F T +R LS ++ K+
Sbjct: 1324 ---------RHERPLGHKKKEAVEVVIDRWLRFRMTENTAVAFKAMRRELSNLLVRKIEA 1374
Query: 1085 P 1085
P
Sbjct: 1375 P 1375
>gi|195353782|ref|XP_002043382.1| GM16493 [Drosophila sechellia]
gi|194127505|gb|EDW49548.1| GM16493 [Drosophila sechellia]
Length = 1298
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 252/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLLHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCEWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERNNGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 222 bits (566), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYEHSLRERRQNDNEYRQFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D FS+YFGGCPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMIDTYPELHVILMSATIDTTLFSKYFGGCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|403411440|emb|CCL98140.1| predicted protein [Fibroporia radiculosa]
Length = 1284
Score = 229 bits (584), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 262/481 (54%), Gaps = 49/481 (10%)
Query: 543 IDLVLIEQLLRKIC-MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
ID LI ++R I S+ GAIL+FLPG ++I + DRL RD I+PLH+
Sbjct: 746 IDYDLILAVVRHIISTASKRGAILIFLPGVQEIRQCIDRL------RDIQNATILPLHAN 799
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+ S +Q++VF P KII++TN+AET+ITIDDV+YVIDSG++KE YDP ++ L
Sbjct: 800 LSSDEQRRVFA--PAMSWKIIVATNVAETSITIDDVIYVIDSGKVKETHYDPETGLTRLL 857
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
WV++A+A+QR GRAGR Q G+CY LY++++ + F VPEI R+P+E + L VK++
Sbjct: 858 EQWVTRAAARQRRGRAGRTQPGVCYKLYTKMQERKMAPFPVPEIMRVPLESIALVVKVV- 916
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
+ +++ FL + LDPP + T+ +A+ VL+D+ AL+ D +VT LG + L V + KML
Sbjct: 917 -HNDVKGFLSRALDPPDTATMDSALRVLEDLAALNADGEVTPLGRHMAMLPVDLRLGKML 975
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P LT+ + F P+ + ++ AT A+ A+ G SD L + A
Sbjct: 976 ILATIFKCLGPVLTVVACLSSKPLFVSPL--DRREEATRARAHFAT---GNSDLLTDLHA 1030
Query: 842 F-ECWK---NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-----PEDV 892
+ EC + K FC + F+S+ + + +R+ + L GF+ P D
Sbjct: 1031 YDECMRLRAEGKPNNVIKRFCDENFISASTIRDITSLRQDFLSSLSDLGFVSASSKPND- 1089
Query: 893 SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGG---------------- 936
+ + N+ ++ AV++ GL+P +AR+ P K+ +F G
Sbjct: 1090 TVLNVNSSNENLLKAVILGGLWPRIARVSLP-KSAIKFDRVQAGTVQRENTAKEFKMYDL 1148
Query: 937 --AKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
+V LHP S+ F + K+ P + Y + + + +R+ T V LLL ++
Sbjct: 1149 REGRVFLHPASVLFGEAAWKS---PFLTYFQ-KQATTKVFLRDATEVPIYGLLLFGGAVS 1204
Query: 995 V 995
V
Sbjct: 1205 V 1205
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 160/277 (57%), Gaps = 32/277 (11%)
Query: 118 FTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDAN 177
H PP +D+ + R + KP +++ A+KV+ L + K
Sbjct: 447 LVHAPPPVASHSNIMDSRRRRAA-----------WKPD-DRSDDAVKVQFLD--LCKTEQ 492
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGET 235
Q++E RSKLP S K +++N+ V++ GETGCGKTTQ+PQF+L+ + G
Sbjct: 493 YEQLLESRSKLPAFSAKTQFLKLLENNRCVIVVGETGCGKTTQLPQFVLDSLILAGHGSR 552
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
IV TQPRR+SA VA R+S ER ++ ++GY IR ESK + + + FCT GV+LR L
Sbjct: 553 ASIVVTQPRRLSALGVASRVSAERLDD--GSVGYAIRGESKQNRRTKLTFCTTGVVLRRL 610
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
S D +S ++H+IVDE+HER D +L ++++ ++P L++ILM
Sbjct: 611 GS--------------GDRLSNVSHVIVDEVHERSVDGDLLLLELKELSRTHPTLKVILM 656
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
SAT++ ++F +YF P++ +PGF +PVK YLED+L
Sbjct: 657 SATINHEKFIEYFDNAPLLTIPGFAHPVKDKYLEDLL 693
>gi|358394187|gb|EHK43588.1| hypothetical protein TRIATDRAFT_320838 [Trichoderma atroviride IMI
206040]
Length = 1490
Score = 229 bits (584), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 162/528 (30%), Positives = 248/528 (46%), Gaps = 57/528 (10%)
Query: 505 ENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE---- 560
++ PE ++ E A S + LA +N IDL LI +L+ +I D
Sbjct: 900 DDAPEATEVDGLKSEIAQSLTGYSNRTKAVLAQMNEYQIDLDLIVELIARIATDESLQEY 959
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
AILVFLPG DI D LL +P F TS ++ PLHS + Q+ F PP G RK
Sbjct: 960 SNAILVFLPGIADIRSLNDMLLGDPRFAQTS--LVYPLHSTIAMEDQEAAFLVPPQGLRK 1017
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
I+L+TNIAET ITI D+ VID+G+ +E +D +S L +++S+A+AKQR GRAGR
Sbjct: 1018 IVLATNIAETGITIPDITCVIDTGKHREMRFDEKKQLSRLIDTFISRANAKQRRGRAGRV 1077
Query: 681 QAGICYHLYSQLRAASL-PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
Q G+C+H++++ R +L D Q PE+ R+ +++L ++VK+ IE+ L LDPP +
Sbjct: 1078 QNGLCFHMFTRYRHDTLMSDQQTPEMLRLSLQDLAIRVKICKIG-GIEETLGDALDPPSA 1136
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
IR AI L D+ AL+ E +T LG +L L + + K++ + CLD A+T+A
Sbjct: 1137 KNIRRAIDALVDVRALTGAEDLTPLGYQLARLPLDVFLGKLILLGSIFKCLDMAITVAAI 1196
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR----GQEA 855
+ PF+ ++ A F A SD L A+ WK Q G+E
Sbjct: 1197 LSSKSPFSATFGQQQQANNARAAFRRAD-----SDVLTTYNAYLAWKRVCQSSGNMGKEF 1251
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF---------------------------- 887
FC + +++ + + ++ QL T L +GF
Sbjct: 1252 QFCRKNYLNQQTLTNIEDLKGQLLTSLADSGFLSLTEEERRGLLKLRYSSGGRGRRQQQF 1311
Query: 888 --IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
+P+ V+ S N V +V+ YP + P G R + + LHP S
Sbjct: 1312 VDVPQRVNLNSDNDLVST---SVIAWSFYPKLLVRDAPGSKGLRNI--GNNQSISLHPTS 1366
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
+N L D + Y I + + + P + LL ++
Sbjct: 1367 VNRALF-----DVRWLSYYTIMQTKSVYRAQETSATEPFAIALLCGDV 1409
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 186/311 (59%), Gaps = 47/311 (15%)
Query: 169 TSRIEKDANLRQI-------------VEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
T IE D NL+++ ++ R +LP+ FK + + VD+NQV++I GETGC
Sbjct: 652 TKHIEIDENLKKMWALKSSRKKYEAMLQSRVQLPMWKFKGEVLNAVDNNQVIIICGETGC 711
Query: 216 GKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGD------NIGY 269
GK+TQVP FLLEH S+G+ CK+ CT+PRRISA S+A R+S E G+ GD +GY
Sbjct: 712 GKSTQVPAFLLEHELSQGKQCKVYCTEPRRISAISLARRVSEELGDEKGDLGTSRSLVGY 771
Query: 270 KIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHER 329
IRLES K + +V+ T G+++R+L E SN D+ +TH+++DE+HER
Sbjct: 772 SIRLESNTSKETRLVYATTGIVMRML---------EGSN-----DLHEVTHLVLDEVHER 817
Query: 330 DRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
SDF+L +++ +L L++ILMSAT+DA+RFS Y G PV+ VPG T+PV+ YLE
Sbjct: 818 SIDSDFLLIVLKRLLKRRKDLKVILMSATVDAERFSAYLDGAPVLNVPGRTFPVQVRYLE 877
Query: 390 DVLSILKSAESNHLDSASLIVPNEDPELTEEN--KSTLDEAIS---------LAWSND-- 436
D + + S + + ++ PE TE + KS + ++++ LA N+
Sbjct: 878 DAVELTGYVPSTSESDRLVDLDDDAPEATEVDGLKSEIAQSLTGYSNRTKAVLAQMNEYQ 937
Query: 437 -EFDMLLELVS 446
+ D+++EL++
Sbjct: 938 IDLDLIVELIA 948
>gi|242817653|ref|XP_002487000.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218713465|gb|EED12889.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1345
Score = 229 bits (584), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 209/375 (55%), Gaps = 23/375 (6%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
G IL+FLPG +I++ + + A P +PLH+ + +QK+VF P G RK+
Sbjct: 828 GGILIFLPGTMEIDRCLNAIRAVPNLH------ALPLHASLLPAEQKRVFNPAPKGKRKV 881
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
I +TN+AET+ITIDDVV VID+GR+KE S+DP +NV LQ W S+A+ KQR GRAGR +
Sbjct: 882 IAATNVAETSITIDDVVAVIDTGRVKETSFDPKDNVVKLQEVWASQAACKQRRGRAGRVK 941
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVT 741
AG CY L+++ +++ PEI+R+P+E+LCL V ++ N DFL KTL PP ++
Sbjct: 942 AGKCYKLFTRSVESNMAPRPDPEIRRVPLEQLCLSVVAMNSIQNAADFLAKTLTPPETIA 1001
Query: 742 IRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASD 801
+ A+ +L IGAL + K+T LG + + +K++ + + C+D +T+A
Sbjct: 1002 VEGALSLLHSIGALD-NNKLTALGRHMSMIPADLRCAKLMVYGSIFGCVDACITIASILI 1060
Query: 802 YRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW-KNAKQRG--QEAWFC 858
R PF +SP +K+ A S GG D L +AA++ W + +K G Q +C
Sbjct: 1061 ARSPF---VSPRDKREEATAARAAFSRGGG--DLLTDLAAYQQWSERSKSTGYWQSNSWC 1115
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS--------HNARVPGIIHAVLM 910
S+ F+S + + R QL T L G +P D S N+ ++ A++
Sbjct: 1116 SENFLSHQTLREISSNRAQLLTSLKDAGILPIDYKKNSTASSNQWDRNSNNTSLLQALIA 1175
Query: 911 AGLYPMVARLRPPHK 925
P +A+++ P K
Sbjct: 1176 GSFNPQIAQIKFPDK 1190
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 143/215 (66%), Gaps = 12/215 (5%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCT 241
+R LP + ++ I V++ QV +ISGETG GK+TQ QF+L+ + + G+ IVCT
Sbjct: 561 QRQSLPAWAMQESIIQCVNTYQVTIISGETGSGKSTQSVQFILDDLLKRDIGDVANIVCT 620
Query: 242 QPRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGV 300
QPRRISA S+A+R+S ER +GD +GY IR SK + I F T GVLLR L +
Sbjct: 621 QPRRISALSLADRVSDERCSTVGDEVGYIIRGGSKVKSGRTKITFMTTGVLLRRLQTS-- 678
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E+S+ AK V +TH++VDE+HER +DF+LA++RD+L + +L++ILMSATLD
Sbjct: 679 ---PESSDDIAKSLVD-ITHVVVDEVHERSLDTDFLLALLRDILNRHENLKVILMSATLD 734
Query: 361 ADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVL 392
AD F QYFGG + +PG T+PV+ +Y++D+L
Sbjct: 735 ADIFMQYFGGPSRVGRVNIPGRTFPVEDYYVDDIL 769
>gi|340516458|gb|EGR46706.1| hypothetical protein TRIREDRAFT_122846 [Trichoderma reesei QM6a]
Length = 1411
Score = 229 bits (584), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 239/498 (47%), Gaps = 57/498 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA +N ID LI +L+ +I +D AILVFLPG DI D LL +P F +
Sbjct: 851 LAQMNEYQIDHDLIVELIARIAVDESLQQYSNAILVFLPGMGDIRSLNDLLLGDPRF--S 908
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +++ PLHS + Q+ F PP G RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 909 AGWLVYPLHSTIAMEDQEAAFLLPPQGMRKIVLATNIAETGITIPDVTCVIDTGKHREMR 968
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++S+ R +L D Q PE+ R+
Sbjct: 969 FDEKKQLSRLIDTFISRANAKQRRGRAGRVQNGLCFHMFSRYRHDTLMSDQQTPEMLRLS 1028
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L LDPP + IR A+ L D+ AL+ E +T LG +L
Sbjct: 1029 LQDLAIRVKICKLG-GIEETLGDALDPPSAKNIRRAVDALVDVRALTGTEDLTPLGYQLA 1087
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD A+T+A + PF+ P + A F A
Sbjct: 1088 RLPLDVFLGKLILLGTIFKCLDMAITVAAILSSKSPFSAPFGQQTQANNARAAFRRAD-- 1145
Query: 830 GGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
SD L A+ WK Q G+E FC + +++ + + ++ QL T L +
Sbjct: 1146 ---SDILTTYNAYLAWKRVCQANGGFGKEFQFCRKNYLNQQTLTNIEDLKGQLLTSLADS 1202
Query: 886 GF------------------------------IPEDVSSCSHNARVPGIIHAVLMAGLYP 915
GF +P+ V+ S N V +V+ YP
Sbjct: 1203 GFLLLTEEERRALLRLRFSAGGRGRRQQQFVEVPQRVNLNSDNDIVST---SVIAWSFYP 1259
Query: 916 MVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHV 975
+ P G R + + LHP S+N L D + Y I +
Sbjct: 1260 KLLVRDIPGSKGLRNI--GNNQSISLHPTSVNRGLF-----DARWLSYYTIMQTKSVYRA 1312
Query: 976 RNCTVVGPLPLLLLATEI 993
TV P + LL ++
Sbjct: 1313 HETTVTEPFAIALLCGDV 1330
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 153/239 (64%), Gaps = 26/239 (10%)
Query: 175 DANLRQIVEE------RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH 228
DA RQ+V++ R +LP+ FKD + VD NQV++I GETGCGK+TQVP FLLEH
Sbjct: 587 DAQDRQVVKQIKALQYREQLPMWKFKDHVLDAVDKNQVIIICGETGCGKSTQVPAFLLEH 646
Query: 229 IWSKGETCKIVCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSS 282
S+G CKI CT+PRRISA S+A R+S E G+ GD +GY IRLES K +
Sbjct: 647 ELSQGRQCKIFCTEPRRISAISLARRVSEELGDEKGDLGTSRSLVGYSIRLESNTSKETR 706
Query: 283 IVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRD 342
+V+ T G+++R+L E SN D+ +TH+++DE+HER SDF+L +++
Sbjct: 707 LVYATTGIVMRML---------EGSN-----DLQEVTHLVLDEVHERSIDSDFLLIVLKR 752
Query: 343 MLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESN 401
+L L++ILMSAT+DA+RFS Y GG PV+ VPG T+PV YLED + + SN
Sbjct: 753 LLKRRKDLKVILMSATVDAERFSAYLGGAPVLNVPGRTFPVMVRYLEDAVELTGYVPSN 811
>gi|189211101|ref|XP_001941881.1| ATP-dependent RNA helicase A [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977974|gb|EDU44600.1| ATP-dependent RNA helicase A [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1469
Score = 229 bits (584), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 149/485 (30%), Positives = 248/485 (51%), Gaps = 48/485 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L+ + ID LI +L+ + D + A+LVFLPG +I + D L +P F
Sbjct: 913 LSNYDEYAIDYDLITRLIETVAYDQQLSRFSSAVLVFLPGIAEIRQLNDILAGHPAF--N 970
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ + I PLHS + S Q+ F PPPG RKI+L+TNIAET +TI D+ VID G+ KE
Sbjct: 971 TNWYIYPLHSTISSEDQQAAFLVPPPGVRKIVLATNIAETGVTIPDITCVIDIGKHKEMR 1030
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L S++S+A+AKQR GRAGR Q G+C+HL+++ R +L + Q PE+ R+
Sbjct: 1031 FDERRQLSRLTQSFISRANAKQRRGRAGRVQEGLCFHLFTKYRHDNLMAEQQTPEMLRLS 1090
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ +IE L + LDPP S IR AI L ++ AL+ E++T LG ++
Sbjct: 1091 LQDLVMRVKICKLG-DIEATLAQALDPPSSRNIRRAIDALVEVDALTPSEELTPLGRQIA 1149
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + C+D A+T+A + PF P K+RA A+ +
Sbjct: 1150 KLPLDAHLGKLVLLSTTFSCVDVAITIAAILSSKSPFLTPF--GAKQRADIARL---AFK 1204
Query: 830 GGQSDQLAVIAAFECWKN--AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
G SD L A++ W+ + E FC + F+S + + ++ QL + L++ GF
Sbjct: 1205 KGDSDLLTTYNAYKAWRAVCSTPGRSEMQFCHKNFLSPQNLGNIEDLKAQLLSSLVEAGF 1264
Query: 888 I---PED-------VSSCSHN--ARVPG----------IIHAVLMAGLYPMVARLRPPHK 925
+ P++ S+ H VP ++++V+ YP + +
Sbjct: 1265 LQLTPDERRVMSRYRSASRHRVFVEVPAQYDMHSDNDVLVNSVIATAFYPKILT-----R 1319
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH-VRNCTVVGPL 984
G+ + + V L P S+N K + + Y I + + + ++ PL
Sbjct: 1320 EGKGWRNISNNQTVSLAPTSVN-----KGSSTANFLSYYHIMQSSNKFYNAHSTSIAHPL 1374
Query: 985 PLLLL 989
P++L+
Sbjct: 1375 PMVLM 1379
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 143/216 (66%), Gaps = 20/216 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ FK+ I STVD NQV +I GETGCGK+TQ+P FLLEH S+G+ CK+ CT+PR
Sbjct: 666 RMNLPVFGFKESILSTVDKNQVTIICGETGCGKSTQIPAFLLEHELSQGKACKVYCTEPR 725
Query: 245 RISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E GE D +GY IRLESK + +V+ T GV+LR+L S
Sbjct: 726 RISAISLAQRVSQELGEGPKDLGTMRSLVGYAIRLESKTSSQTRLVYATVGVVLRMLESS 785
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + +TH+++DE+HER +DF+L I+R ++ P L++ILMSAT
Sbjct: 786 G--------------GLQEVTHLVIDEVHERSIDTDFLLVILRSLMERRPELKVILMSAT 831
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+DA RFS+Y P++ VPG T+PV++ YLED + +
Sbjct: 832 VDAARFSRYLNDAPILTVPGRTFPVQTRYLEDAIEL 867
>gi|194864148|ref|XP_001970794.1| GG10841 [Drosophila erecta]
gi|190662661|gb|EDV59853.1| GG10841 [Drosophila erecta]
Length = 1304
Score = 229 bits (583), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 254/483 (52%), Gaps = 26/483 (5%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 613 NKICEDKYSQKTRNAMAMLSESDVSFELLEALLLHIKSKNIPGAILVFLPGWNLIFALMK 672
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 673 FLQNTNTFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGITKIILSTNIAETSITIDDIVF 732
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 733 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFEALED 792
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 793 TLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 851
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 852 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 909
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 910 NHQK----ALSGSKCSDHVAMIVASQMWRREKQRGEQMEARFCDWKGLQMSTMNVIWDAK 965
Query: 876 KQLQTELIKNGF-----IPEDVSSCSHNARVP--GIIHAVLMAGLYPMVARLRPPHKNGR 928
+QL L + GF IP +V +N P + A+L GLYP + HK R
Sbjct: 966 QQLLDLLQQAGFPEECMIPHEVDE-KNNGDDPLLDVSLALLCLGLYPNIC----VHKEKR 1020
Query: 929 RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
+ + T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 KVLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVIL 1077
Query: 989 LAT 991
+
Sbjct: 1078 FGS 1080
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 164/243 (67%), Gaps = 20/243 (8%)
Query: 156 MSKAEIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETG 214
+S +I+M E SL R + D RQ +E R KLPI++ + I S ++ N VV+I G TG
Sbjct: 351 VSIDDISMDYERSLRERRQNDNEYRQFLEFRDKLPIAAMRSEILSAINDNPVVIIRGNTG 410
Query: 215 CGKTTQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
CGKTTQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER EN+G+ +GY +R
Sbjct: 411 CGKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCENLGETVGYSVR 470
Query: 273 LESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
ES + + +I+FCT GVLLR L EA + ++HIIVDEIHERD
Sbjct: 471 FESVFPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDV 514
Query: 332 YSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDV 391
SDF+L I+RDM+ +YP L +ILMSAT+D FS+YFGGCPV++VPG +PV+ F+LED+
Sbjct: 515 NSDFLLVILRDMVDTYPELHVILMSATIDTTLFSKYFGGCPVLEVPGRAFPVQQFFLEDI 574
Query: 392 LSI 394
L +
Sbjct: 575 LQM 577
>gi|157382894|gb|ABV48882.1| maleless [Drosophila simulans]
Length = 1298
Score = 229 bits (583), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 252/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGSKCSDHVAMIVASQMWRREKQRGEHMEARFCEWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + + + R G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMITHDVDERNNGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 222 bits (566), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYEHSLRERRQNDNEYRQFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLL-EHIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L ++I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILNDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D FS+YFGGCPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMIDTYPELHVILMSATIDTTLFSKYFGGCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157382892|gb|ABV48881.1| maleless [Drosophila simulans]
Length = 1298
Score = 229 bits (583), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 252/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGSKCSDHVAMIVASQMWRREKQRGEHMEARFCEWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + + + R G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMITHDVDERNNGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 223 bits (568), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYEHSLRERRQNDTEYRQFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D FS+YFGGCPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMIDTYPELHVILMSATIDTTLFSKYFGGCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157382890|gb|ABV48880.1| maleless [Drosophila simulans]
Length = 1298
Score = 229 bits (583), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 252/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGSKCSDHVAMIVASQMWRREKQRGEHMEARFCEWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + + + R G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMITHDVDERNNGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 165/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYEHSLRDRRQNDTEYRQFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCGQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D FS+YFGGCPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMIDTYPELHVILMSATIDTTLFSKYFGGCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|330845065|ref|XP_003294422.1| hypothetical protein DICPUDRAFT_159415 [Dictyostelium purpureum]
gi|325075117|gb|EGC29050.1| hypothetical protein DICPUDRAFT_159415 [Dictyostelium purpureum]
Length = 1427
Score = 229 bits (583), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 225/441 (51%), Gaps = 52/441 (11%)
Query: 541 ELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDT-SKFVIIP 597
E + L L+ +++K + +ILVFLPG DI + RL AN F +K +P
Sbjct: 858 ESLILYLVSTVVKK------NKSILVFLPGLGDILELCSRLSKPANSFTEFICNKIWCVP 911
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS + Q+KVF+ P G KI++STNIAET+ITI+DV V+D GR+ + SY+
Sbjct: 912 LHSSLSPQDQQKVFESAPNGKIKIVISTNIAETSITIEDVEIVVDCGRVNQMSYNSITRA 971
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
S ++ +W SKAS +QRAGRAGR +G+CY ++++ + D PEI R +++LCL V
Sbjct: 972 SVMEETWTSKASCRQRAGRAGRTSSGLCYKVFTKAMESQFQDQDTPEILRTSLQQLCLHV 1031
Query: 718 KLLDPN---CNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL---DEKVTELGEKLGCL 771
KL N I+ FL ++PP S I+++I L I AL + + +T LG L L
Sbjct: 1032 KLFIGNEKKTTIQQFLSNAIEPPSSEQIQSSINELISIDALDITGNSQTLTPLGHHLASL 1091
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGG 831
V + KML F + C+DP LT+A + PF ++P++KK KF
Sbjct: 1092 PVDVYIGKMLLFGCIFRCIDPMLTIAATLSSKSPF---LNPSDKKIRPHQKFA-----SH 1143
Query: 832 QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
QSD L + A+ W+ A G E FC ++S + + ++ Q L GF+P
Sbjct: 1144 QSDHLMFVNAYNQWRKAIADGNEYQFCKDNYLSISTLRTIQDLKIQFVEILSDIGFLPSG 1203
Query: 892 VSS---------------------CSH----NARVPGIIHAVLMAGLYPMVARLRPPHKN 926
++ C + N+ II++VL AG+YP V R+ P
Sbjct: 1204 ITMKKMIKYQKINKLNGTDGIEDICGYIYNSNSTKTKIINSVLCAGMYPKVGRIDLPDA- 1262
Query: 927 GRRFVETAGGA-KVRLHPHSL 946
++ +TA GA + + P L
Sbjct: 1263 --KYSQTASGAIRNKFQPEDL 1281
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 207/375 (55%), Gaps = 52/375 (13%)
Query: 137 SRKSDKTRGKRVDIFCKPKMSKAEIAMK--VESLTSRIEKDANLRQIVEERSKLPISSFK 194
S KS K + K VD K + E K +E+ I KD + QI ++R LP+ K
Sbjct: 551 SNKSTKNK-KNVDYSNKLTNQEKEKINKDLLENYEKLIAKDLDKTQINKKRQLLPVYKRK 609
Query: 195 DVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCTQPRRISATSVA 252
+ +D+NQV++++ ETGCGK+TQ+PQ++LE KG C IVCTQPRRISA VA
Sbjct: 610 EEFLKALDANQVLVVTAETGCGKSTQIPQYILESFVKSGKGSECNIVCTQPRRISAIGVA 669
Query: 253 ERISVER--GEN--IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASN 308
ER+S E G+N IG +GY+IR ESK + ++FCT G+LLR ++
Sbjct: 670 ERVSYEWNCGDNGAIGQMVGYQIRNESKRSASTRLLFCTTGILLRRILDV---------- 719
Query: 309 KPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF 368
+ ++ ++HII+DE+HER +DF+L I+R+++ L++ILMSATL+A++ S YF
Sbjct: 720 ----NSIANVSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNANQISNYF 775
Query: 369 GGC---PVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSAS------------LIVPNE 413
C + +PGFTYPVK+ Y++++LS L N+ D+ S + PN+
Sbjct: 776 -KCNQDSIFSIPGFTYPVKNIYIDEILSNLSKYNPNYKDTISTTTTTTTTTTTAIADPNQ 834
Query: 414 DPELT-EENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGK 472
+ EL +NK D+ + + E ++L LVS N + L+ L G
Sbjct: 835 ELELKLNQNKINFDQK-RINYDIVE-SLILYLVSTVVKKNK----------SILVFLPGL 882
Query: 473 GRVGDVCMLLSLGAD 487
G + ++C LS A+
Sbjct: 883 GDILELCSRLSKPAN 897
>gi|320170383|gb|EFW47282.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 1566
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 266/535 (49%), Gaps = 71/535 (13%)
Query: 511 AQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPG 570
AQ + ++ +S QQ D+ L+ L+D++ + + + G +LVFLP
Sbjct: 928 AQANSSLLAHSSRESFTQQFEDQPLSANYAALVDVI-------RFAIRTVSGVVLVFLPS 980
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W+DI LL+ + S+ +PLHS + +Q+ VF P G ++IL+TNIAET
Sbjct: 981 WDDIRT----LLS--MTQGWSRTQFLPLHSTLSMQEQQLVFSPVPAGFIRVILATNIAET 1034
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITID+V VID+GR++EKS+ ++ + +L + W+SKAS QR GRAGR + GICYH+YS
Sbjct: 1035 SITIDNVEAVIDTGRVREKSHAGFSALGSLTTRWISKASMMQRKGRAGRTRPGICYHMYS 1094
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+A++L +F PEI R P+ + CL +KLL+ +I FL +T DPP SV + A+ L
Sbjct: 1095 SHKASTLDEFARPEILRSPLYDTCLYIKLLELG-SIRTFLSQTPDPPESVQVSLALETLV 1153
Query: 751 DIGALSL-DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLP 809
D+GAL E +T LG+ L L + P K+L +A + LD AL +A +++ RDPF L
Sbjct: 1154 DMGALEQPGEILTPLGKTLAQLPIDPRYGKLLIYASAFNALDFALPVAASANTRDPF-LT 1212
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW--------------KNAKQRGQEA 855
+S +E +A A + A + SD +A+ A ++ + + K +A
Sbjct: 1213 MSSSETAKARAIALKQALAFRTSSDTVAIAAVYQRYLATTSAKPSSSSSAPSVKTEPIDA 1272
Query: 856 WFCSQYFVSSGVMNMLL-------GMRKQLQ----------------------TELIKNG 886
S +S ++ L MRK +Q T +K G
Sbjct: 1273 MDASAVDTASDPLDFALVSSDVLHSMRKTVQQVSEALTNLNVRQPAVANRPSGTSGVKFG 1332
Query: 887 FIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
+ E VS+ S I+ A+L A L+P VA R ++ T HP +
Sbjct: 1333 ELSEAVST-SDRLNSAAILSALLCAALFPNVAVYR-----KKKNCITRHARNAIFHPSCV 1386
Query: 947 NFKLSFKKTDDC-PLMVYDEITRG-----DGGMHVRNCTVVGPLPLLLLATEIAV 995
++ + P +++E R DG +R+ T+V PL L+L AV
Sbjct: 1387 SYHRDPAASGPMFPFFMFEEQVRAADEASDGVTSIRSTTMVSPLALILFGKVTAV 1441
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 131/231 (56%), Gaps = 26/231 (11%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQ 242
R LP D IT V+ N V +++G TG GKTTQVPQ +L+ G C I+ T+
Sbjct: 718 RFSLPTMLRADEITKIVEQNDVTIVTGATGSGKTTQVPQLILDKYTQDGNGGRCHILVTE 777
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESK--GGKHSSIVFCTNGVLLRLLVSQGV 300
PRRI+A A R++ ERGE +G ++GY +R +S+ +IVFCT+G LLR L
Sbjct: 778 PRRIAAIGAAARVAEERGETLGQSVGYFVRHDSQLPPSIAGTIVFCTSGALLRRLA---- 833
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS----YPHLRLILMS 356
+ +TH+I+DE+HERD SDF L +IR +L S L++ILMS
Sbjct: 834 ----------VDPTLVGVTHLILDEVHERDIASDFTLTLIRTLLTSGKRNGSQLKVILMS 883
Query: 357 ATLDADRFSQYFGG----CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHL 403
AT+ A+RF +YF C I V G ++PV+SFY D+ +++ ++ L
Sbjct: 884 ATVHAERFLEYFKSAGLRCGGITVEGQSFPVRSFYWHDLFDTVRAQANSSL 934
>gi|449299997|gb|EMC96010.1| hypothetical protein BAUCODRAFT_24972 [Baudoinia compniacensis UAMH
10762]
Length = 1411
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/442 (34%), Positives = 229/442 (51%), Gaps = 42/442 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LAT + ID LI +LL K+ D A LVFLPG +I + D L+ +P F +
Sbjct: 865 LATYDEYRIDYALILKLLEKVAYDQNYKPFSKATLVFLPGIAEIRQLNDMLVGHPAF--S 922
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ I LHS S Q+ F+ PP G RKI+L+TNIAET ITI DV VID+G+ KE
Sbjct: 923 HGWRIHALHSSFASEDQQAAFEVPPNGVRKIVLATNIAETGITIPDVTCVIDTGKHKEMR 982
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L S++++A+AKQR GRAGR Q GIC+HL+++ R L + Q PE+ R+
Sbjct: 983 FDEKRQMSRLIQSFIARANAKQRRGRAGRVQEGICFHLFTKYRHDELMAESQTPEMLRLS 1042
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ NIE+ L + LDPP S +R AI L ++ AL+ +E++T LG++L
Sbjct: 1043 LQDLVMRVKICKLG-NIEEALGQALDPPSSRNVRRAIEALIEVDALTANEELTSLGQQLA 1101
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ CLD ALT A + PF P+ + KK+A +
Sbjct: 1102 KLPLDAQLGKLVLLGSAFGCLDFALTTAATLTSKSPFLSPM--HAKKQADTVRL---GFK 1156
Query: 830 GGQSDQLAVIAAFECWKN--AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
G SD L V A+ W+ E FC++ F+S + + ++ QL T L+ GF
Sbjct: 1157 RGDSDLLTVYQAYCAWRKTCTTSGTSEYHFCNKNFLSPQNLANIEDLKGQLLTALVDAGF 1216
Query: 888 IPEDVSSCSHNARV-PG---------------------IIHAVLMAGLYPMVARLRPPHK 925
+ +RV PG +I AV+ YP + + +
Sbjct: 1217 ANLGSDERAALSRVRPGSRQRNFVALPEKYRSAEDDDDLISAVVAWSFYPKIIK-----R 1271
Query: 926 NGRRFVETAGGAKVRLHPHSLN 947
+G+ + A + LHP S+N
Sbjct: 1272 DGKGWRNIANNQSLALHPASVN 1293
Score = 196 bits (497), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 154/251 (61%), Gaps = 20/251 (7%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
SK A ++ L +R ++++ +R LPI +K I + NQV+++ ETG G
Sbjct: 591 SKTAAAEELRGLWARKLSAPTYQRMLFQRMNLPIFHYKAAILDAIVRNQVIILVSETGSG 650
Query: 217 KTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDN------IGYK 270
K+TQ+P ++LEH S+G+ CK+ CT+PRRISA S+A+R+S E GE+ GD +GY
Sbjct: 651 KSTQLPAYILEHELSQGQACKVYCTEPRRISAISLAQRVSEEMGEHKGDVGTARSLVGYA 710
Query: 271 IRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
IRLES + +V+ T G++LR+L + V LK+ +TH+++DE+HER
Sbjct: 711 IRLESHTAASTRLVYATTGIVLRML--ENVDGLKD------------VTHLVIDEVHERT 756
Query: 331 RYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
+DF+L I+R +L L+++LMSAT++A RFS+Y P+I VPG T+PV++ +LED
Sbjct: 757 IDTDFLLIILRSLLQQRKDLKVVLMSATVNAQRFSEYLDRAPIIDVPGRTFPVQAMFLED 816
Query: 391 VLSILKSAESN 401
L + N
Sbjct: 817 ALEMTDHVNDN 827
>gi|330907738|ref|XP_003295920.1| hypothetical protein PTT_03730 [Pyrenophora teres f. teres 0-1]
gi|311332363|gb|EFQ95988.1| hypothetical protein PTT_03730 [Pyrenophora teres f. teres 0-1]
Length = 1470
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 248/485 (51%), Gaps = 48/485 (9%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
L+ + ID LI +L+ + D + A+LVFLPG +I + D L +P F
Sbjct: 914 LSNYDEYAIDYDLITRLIETVAYDQQLSRFSSAVLVFLPGIAEIRQLNDILAGHPAF--N 971
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ + I PLHS + S Q+ F PPPG RKI+L+TNIAET +TI D+ VID G+ KE
Sbjct: 972 TNWYIYPLHSTISSEDQQAAFLVPPPGVRKIVLATNIAETGVTIPDITCVIDIGKHKEMR 1031
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L S++S+A+AKQR GRAGR Q G+C+HL+++ R +L + Q PE+ R+
Sbjct: 1032 FDERRQLSRLTQSFISRANAKQRRGRAGRVQEGLCFHLFTKYRHDNLMAEQQTPEMLRLS 1091
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ +IE L + LDPP S IR AI L ++ AL+ E++T LG ++
Sbjct: 1092 LQDLVMRVKICKLG-DIEATLAQALDPPSSRNIRRAIDALVEVDALTPSEELTPLGRQIA 1150
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + C+D A+T+A + PF P K+RA A+ +
Sbjct: 1151 KLPLDAHLGKLVLLSTTFACVDVAITIAAILSSKSPFLTPF--GAKQRADIARL---AFK 1205
Query: 830 GGQSDQLAVIAAFECWKN--AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
G SD L A++ W+ + E FC + F+S + + ++ QL + L++ GF
Sbjct: 1206 KGDSDLLTTYNAYKAWRAVCSTPGRSEMQFCHKNFLSPQNLGNIEDLKAQLLSSLVEAGF 1265
Query: 888 I---PED-------VSSCSHN--ARVPG----------IIHAVLMAGLYPMVARLRPPHK 925
+ P++ S+ H VP ++++V+ YP + +
Sbjct: 1266 LQLTPDERRIMSRYRSTSRHRVFVEVPAQYDMHSDNDVLVNSVIATAFYPKIL-----TR 1320
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVG-PL 984
G+ + + V L P S+N K + + Y I + + + T + PL
Sbjct: 1321 EGKGWRNISNNQTVSLAPTSVN-----KGSSTANFLSYYHIMQSSNKFYNAHSTSIAYPL 1375
Query: 985 PLLLL 989
P++L+
Sbjct: 1376 PMVLM 1380
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 143/216 (66%), Gaps = 20/216 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LP+ FK+ I STVD NQV +I GETGCGK+TQ+P FLLEH S+G+ CK+ CT+PR
Sbjct: 667 RMNLPVFGFKESILSTVDKNQVTIICGETGCGKSTQIPAFLLEHELSQGKACKVYCTEPR 726
Query: 245 RISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E GE D +GY IRLESK + +V+ T GV+LR+L S
Sbjct: 727 RISAISLAQRVSQELGEGPKDLGTMRSLVGYAIRLESKTSSQTRLVYATVGVVLRMLESS 786
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + +TH+++DE+HER +DF+L I+R ++ P L++ILMSAT
Sbjct: 787 G--------------GLQEVTHLVIDEVHERSIDTDFLLVILRSLMERRPELKVILMSAT 832
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+DA RFS+Y P++ VPG T+PV++ YLED + +
Sbjct: 833 VDAARFSRYLNDAPILTVPGRTFPVQTRYLEDAIEL 868
>gi|260830294|ref|XP_002610096.1| hypothetical protein BRAFLDRAFT_125653 [Branchiostoma floridae]
gi|229295459|gb|EEN66106.1| hypothetical protein BRAFLDRAFT_125653 [Branchiostoma floridae]
Length = 937
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/275 (44%), Positives = 172/275 (62%), Gaps = 19/275 (6%)
Query: 142 KTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKD---ANLRQIVEERSKLPISSFKDVIT 198
KT R + F +P + + L R +K + R ++ ER KLP + +D I
Sbjct: 247 KTAVVRNNKFVRPVKDLHVVRSENRKLKDRFKKKQTTSAYRSMLGERKKLPAWNEQDNIL 306
Query: 199 STVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCTQPRRISATSVAERIS 256
++ NQV+++SG TGCGKTTQVPQF+L+ SKG C I+CTQPRRISAT+VA+R++
Sbjct: 307 KALNDNQVLVVSGMTGCGKTTQVPQFILDDYLGSSKGGLCNIICTQPRRISATAVADRVA 366
Query: 257 VERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVS 316
ER E +G+ +GY+IRLESK + +VFCT GVLLR L +G S L+
Sbjct: 367 NERVERLGNVVGYQIRLESKMSTWTRLVFCTTGVLLRRL--EGDSLLE------------ 412
Query: 317 ALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQV 376
+THIIVDE+HER SDF++ +++D+LP P +R+ILMSATL+AD FS YFG PVI++
Sbjct: 413 GITHIIVDEVHERSEESDFLIMVLKDLLPKRPDIRVILMSATLNADLFSMYFGNSPVIEI 472
Query: 377 PGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVP 411
PG +PV ++LED + + + A L+ P
Sbjct: 473 PGKIFPVDQYFLEDAIDFTRYVVEENSPYARLLKP 507
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 219/421 (52%), Gaps = 85/421 (20%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDS----EDGAILVFLPGWEDINKTRDRLLANPFF- 587
K LAT++ E I+ L+E LL I M + +DGA+LVFLPG +I ++L ++ F
Sbjct: 568 KTLATMDFEKINNDLMEALLEWIVMGNHQYPKDGAVLVFLPGLAEITSLYEQLQSSSVFG 627
Query: 588 -RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
R KF IIPLHS + S Q+KVF +P G KI+LSTNIAET+ITIDDVV+VID+GRM
Sbjct: 628 SRSKRKFNIIPLHSSLSSEDQQKVFYKPKEGTTKIVLSTNIAETSITIDDVVFVIDAGRM 687
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEI 705
KEK YD + +L+ +WVSKA+A QR GRAGR +G+C+HL++ + + QVPEI
Sbjct: 688 KEKRYDHTKGMESLEVTWVSKANALQRKGRAGRVASGVCFHLFTSHSFDHIFREQQVPEI 747
Query: 706 KRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
+R P+E+L L++K+LD + ++ L +TL+PP I AI LQD+GAL+ D+
Sbjct: 748 QRAPLEQLLLRIKILDIFKDQELQHVLSRTLEPPKPTNIETAIARLQDLGALNRDQ---- 803
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
V P D RD ++KK+ A
Sbjct: 804 ---------VAPF------------------------DKRD------EADKKKQEFAI-- 822
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTE 881
G SD L ++ A++ W + + G A + + F+S + ++ M++Q
Sbjct: 823 -------GNSDHLTLLNAYKGWTTSLKHGSYAGYRYSMENFLSIKTLKEIVSMKRQFTEL 875
Query: 882 LIKNGFIPEDVSS----------------------CSHNARVPGIIHAVLMAGLYPMVAR 919
L GF+ E +++ + NA ++ A++ A LYP V +
Sbjct: 876 LSSIGFVKEGLTARQIERSSNSNDPDGIITAAGEETNLNANNQQLVAAMMCAALYPNVVQ 935
Query: 920 L 920
+
Sbjct: 936 V 936
>gi|303270879|ref|XP_003054801.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462775|gb|EEH60053.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 830
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 194/334 (58%), Gaps = 10/334 (2%)
Query: 550 QLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF--VIIPLHSMVPSVQQ 607
+LL IC + GAILVF+PG +I+K D +++P +I LHS + + +Q
Sbjct: 256 KLLEHICANEAAGAILVFMPGLAEISKLHDACVSSPVVSKACGHGKYLIALHSTLSTAEQ 315
Query: 608 KKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSK 667
K VF+ PP RKI+++TNIAET+ITIDDVVYV+D G+ KE YDP + L WVS+
Sbjct: 316 KVVFEHPPGDYRKIVIATNIAETSITIDDVVYVLDFGKCKENGYDPNTRMQMLLEQWVSR 375
Query: 668 ASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
ASAKQR GRAGR +AG C+ +Y++ + + +PEIKR+P+E LCLQ++L + I
Sbjct: 376 ASAKQRRGRAGRVRAGRCFRMYTRFVHERVFAEHTMPEIKRVPLEGLCLQIQLQRMSGGI 435
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL K L+PP +I +AI L+ IGAL E +T LG+ L L V + KML + +
Sbjct: 436 AGFLGKALEPPKEDSIASAIKTLRQIGALDDKENLTPLGQHLAALPVDVRVGKMLLYGAV 495
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
+ CL P LT+A R PF P+ ++ A AAK A QSD LA + A+ W
Sbjct: 496 LGCLSPVLTIAAVLGGRSPFVAPL--EKRDEADAAKRAFAE---DQSDHLATLNAYNAWV 550
Query: 847 NAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQL 878
+AK G+ E F F+S + + +R Q
Sbjct: 551 DAKSLGKAAEMAFTRDNFLSFRTLEGVADLRNQF 584
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 151/226 (66%), Gaps = 16/226 (7%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R + ++ +R +LP + D + + V S+QV +++GETGCGKTTQ+PQF+L+
Sbjct: 7 RARDGGAIATLMGQRMRLPAWAKTDELLAAVASHQVTIVAGETGCGKTTQLPQFILDDAI 66
Query: 231 SKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTN 288
++G+ C ++CTQPRRISATSVA R++ ERGE++G +GYKIRLES + I+F T
Sbjct: 67 ARGDGARCNLICTQPRRISATSVAARVAAERGESVGKTVGYKIRLESVASSSTRILFVTT 126
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP 348
GVLLR L + ++ ++H++VDE+HER SDF+L ++RD+LP P
Sbjct: 127 GVLLRRLAEDPL--------------LAGVSHVVVDEVHERSLDSDFLLVLLRDVLPHRP 172
Query: 349 HLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
LR++LMSATL+A FS YF G V Q+PGFTYPV+ YLED++ +
Sbjct: 173 TLRVVLMSATLNAGAFSAYFKGAAVAQIPGFTYPVQEHYLEDIVQV 218
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 894 SCSHNARVPGIIHAVLMAGLYPMVARLRP---PHKNGRRFV--ETAGGAKVRLHPHSLNF 948
+ + NA ++ AVL+AGLYP + R+ P P R F E +++HP S+N
Sbjct: 656 NANRNASNTRLVKAVLVAGLYPNLIRVDPSSKPSAPPRLFYLSELGKDETLQVHPSSVNH 715
Query: 949 KLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
K MVY E + + VR+C+ V P LLL ++ V
Sbjct: 716 G---AKKFSARWMVYHERVQ-TTSVFVRDCSTVTPYQLLLFGGKVEV 758
>gi|407859301|gb|EKG06980.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 1262
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 267/501 (53%), Gaps = 30/501 (5%)
Query: 515 KKHMENALSDSMKQQLLDKYLATV------NPE-LIDLVLIEQLLRKICMDSED--GAIL 565
KK D + +K ATV +PE L+ L+ +L+ I S D +IL
Sbjct: 524 KKSKNGNSEDGNDGSIFEKIKATVFGETDNDPEVLVPYDLVFKLISYIHASSHDFSESIL 583
Query: 566 VFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILST 625
+FLPGW I++ + +P R+ S ++ LHS + + +Q++VF RPP RK++LST
Sbjct: 584 IFLPGWASISRVNTMIQRSPIARELS---VLQLHSSLTAAEQQRVFYRPPKRFRKVVLST 640
Query: 626 NIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIC 685
NIAE ++TIDD+VYVIDS K SYD N S L+++++SKA+ QR GRAGRC+AG+C
Sbjct: 641 NIAEASVTIDDIVYVIDSCLTKGTSYDARGNTSVLKATFISKANGMQRRGRAGRCRAGVC 700
Query: 686 YHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNA 745
HL + LP+F +PEI R P+E++CLQVK L P+ E L + +DPP + + +A
Sbjct: 701 VHLLPRSAYEKLPEFLLPEIMRSPLEDVCLQVKALKPDEVCEKVLSRAMDPPPADSTEHA 760
Query: 746 IIVLQDIGALSLD-EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRD 804
+ L+D+GA + + E++T LG L L +HPL+ KML A + L+P +T+A +
Sbjct: 761 VRFLKDMGAFTSEKEQMTNLGRALSKLPIHPLLGKMLLAAACLGVLEPVVTIAAYLSGKS 820
Query: 805 PFTLPISPNEKKRATAAKFELASLYGG-QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFV 863
PF P+ P++K A + + S+ G SD L+V+ F+ WK + A + Q F
Sbjct: 821 PFIKPL-PHQK---NAMRNAVQSIDNGLLSDHLSVMKLFDEWKKS---NCSADYAMQNFA 873
Query: 864 SSGVMNMLLGMRKQLQTELIKNGFIPEDVSS----CSHNARVPGIIHAVLMAGLYPMVAR 919
V+ + +RKQL L+K+ + V S ++ G++ V + LYP +A
Sbjct: 874 DQTVLRSMDRIRKQL-LRLVKDSSLLRKVEDPMRMASRHSSNLGLVRLVALWSLYPRIAS 932
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC---PLMVYDEITRGDGGMHVR 976
+ R+ E ++ ++ L+FK DD + Y E + + V
Sbjct: 933 VEYRANRNRKRPEIFCWDN-KVAQCAMGSALAFKNRDDFRDRAFVFYHERMYLEANLTVF 991
Query: 977 NCTVVGPLPLLLLATEIAVAP 997
+ + V P+ + L E A+ P
Sbjct: 992 DASAVTPVEVALCLREFALRP 1012
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 206/437 (47%), Gaps = 74/437 (16%)
Query: 1 MGKKKQKKAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVY------------- 47
MG + + Q Q+Q S V ++S + + +K +Y
Sbjct: 95 MGHESSRGMMVNQNPFQEQNSVPVTAVANSKVSICNEEGVWTKKNLYAMVKAFVDDPNAE 154
Query: 48 --TFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLT 105
+F LS ER +VHE+ + +S+G +R +++ K++ + K +E +
Sbjct: 155 EMSFPPTLSAAERHMVHEIALNFNLHHRSAGCKSERVLTL----KKIGSIKNQEKDREIA 210
Query: 106 FSEGSKLVLQDLF--THYPPDD-------------GEPGEKLDANQSRKSDKTRGKRVDI 150
G ++ D + PD+ G K+ + + K R +
Sbjct: 211 AFNGDRVKTIDGYQGAQRLPDEYIKSRMNEISLLLGPFLRKMYSQLKATAAKPFRNRHLV 270
Query: 151 FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS 210
+P + KA ++ R++ E R LP +D I + + N V+++S
Sbjct: 271 VVQPGLMKAPQGNT---------QNQRYRELQEFRRSLPSYKRRDEIINALKQNNVLIVS 321
Query: 211 GETGCGKTTQVPQFLLE-HIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGY 269
G+TGCGKTTQ+PQ L + ++ K +I+CTQPRRISA SVA+R++ ERGE G++ GY
Sbjct: 322 GDTGCGKTTQIPQILYDSEVFQKD--LEIICTQPRRISALSVAQRVAEERGETCGNSCGY 379
Query: 270 KIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHER 329
IR ++ + IV+ T G+LLR L P + VS IIVDE+HER
Sbjct: 380 IIRFDNMTSPSTKIVYMTTGILLRRL-----------HTDPQLNGVSC---IIVDEVHER 425
Query: 330 DRYSDFMLAIIRDMLPSYP--------HLRLILMSATLDADRFSQYF----GG--CPVIQ 375
D +DF L ++RD L H+++++MSAT+ ++ + YF GG P+I
Sbjct: 426 DVETDFCLLLLRDRLIEQQRNKQLYKNHVKVVVMSATVQIEKVASYFVCVCGGRAPPIIS 485
Query: 376 VPGFTYPVKSFYLEDVL 392
+PG +PV+ +LE+ L
Sbjct: 486 IPGTLFPVEECFLEEAL 502
>gi|157382886|gb|ABV48878.1| maleless [Drosophila simulans]
Length = 1298
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 251/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS + I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSLYRILPCHSQIPRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGSKCSDHVAMIVASQMWRREKQRGEHMEARFCEWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + + + R G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMITHDVDERNNGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI+S + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYEHSLRERRQNDNEYRQFLEFRDKLPIASMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D FS+YFGGCPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMIDTYPELHVILMSATIDTTLFSKYFGGCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|336269729|ref|XP_003349625.1| hypothetical protein SMAC_03214 [Sordaria macrospora k-hell]
gi|380093300|emb|CCC08958.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1400
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 223/402 (55%), Gaps = 34/402 (8%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
G IL+FLPG +IN+ + L A P ++PLH+ + + +QK+VF PPG RK+
Sbjct: 891 GGILIFLPGVAEINRACNALRAIPSLH------VLPLHASLETKEQKRVFAAAPPGKRKV 944
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
+++TN+AET+ITIDD+V VIDSGR+KE S+DP NN+ L+ +W S+A+ KQR GRAGR Q
Sbjct: 945 VIATNVAETSITIDDIVAVIDSGRVKETSFDPQNNMRKLEETWASRAACKQRRGRAGRVQ 1004
Query: 682 AGICYHLYS---QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
AG CY L++ +++ A PD PEI+R+P+E+LCL V+ + ++ FL + PP
Sbjct: 1005 AGKCYKLFTRNMEMQMAERPD---PEIRRVPLEQLCLAVRAMGIK-DVSQFLSRAPTPPE 1060
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
+ + +I +L+ +GAL E++T LG++L + K++ + + CLD +T++
Sbjct: 1061 ATAVEASITMLRRMGALD-GEELTALGQQLAMIPADLRCGKLMVYGSIFGCLDDCVTISA 1119
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN-AKQR-GQ--- 853
+ PF +SP EK+ AK G D L + AF+ W + QR GQ
Sbjct: 1120 ILSTKSPF---VSPQEKRE--EAKEARKRFSQGDGDLLTDLRAFQEWNDQMNQRLGQSRV 1174
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP-----EDVSSCSHNARVPGIIHAV 908
AW C F++ ++ + R Q + L + G IP + ++ + ++ A+
Sbjct: 1175 RAW-CGDNFLNYQTLSDIASTRSQYYSALKEMGIIPYNYSEYNNNNQQQGNKSMALLRAL 1233
Query: 909 LMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKL 950
+ P +AR++ P K +F + GA V L P + K
Sbjct: 1234 TASAFSPQIARIQFPDK---KFAASMTGA-VELDPEAKTIKF 1271
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 178/314 (56%), Gaps = 25/314 (7%)
Query: 144 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDS 203
R +R + KP ++ + E +R E + ++++ R LP +D + TV
Sbjct: 577 RARRAPRYPKP-INWSPDPRSTEEWRARTET-PSYKKMLYARQNLPAWQVQDYLVQTVSE 634
Query: 204 NQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGE 261
NQV +ISGETG GK+TQ QF+L+ ++SKG + I+ TQPRRISA +A+R+S ER
Sbjct: 635 NQVTIISGETGSGKSTQSVQFILDDLYSKGLGKGANIIVTQPRRISALGLADRVSDERCS 694
Query: 262 NIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHI 321
+G +GY IR ESK ++ I F T GVLLR L + G R+++ + A DVS H+
Sbjct: 695 QVGQEVGYSIRGESKTSLNTRITFVTTGVLLRRLQTSG-GRVEDVVSSLA--DVS---HV 748
Query: 322 IVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFG------GCPVIQ 375
+VDE+HER +DF+LAIIRD+L L+LILMSATLDA F YF +++
Sbjct: 749 VVDEVHERSLDTDFLLAIIRDVLYKRRDLKLILMSATLDAASFKDYFTVDNRNVSVGLVE 808
Query: 376 VPGFTYPVKSFYLEDVLSILKSAESN----HLDSASLIVPNEDPELTEENKSTLDEAISL 431
+ G TYPV+ +YL+DV+ + + N + D + EDP N +++ I
Sbjct: 809 ISGRTYPVQDYYLDDVIHMTGFSVGNRGEYYYDDNAGSNAKEDP-----NADPINKIIQR 863
Query: 432 AWSNDEFDMLLELV 445
S +D+L+E V
Sbjct: 864 MGSRINYDLLVETV 877
>gi|195580870|ref|XP_002080257.1| GD10344 [Drosophila simulans]
gi|194192266|gb|EDX05842.1| GD10344 [Drosophila simulans]
Length = 1298
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 251/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS + I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSLYRILPCHSQIPRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGSKCSDHVAMIVASQMWRREKQRGEHMEARFCEWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + + + R G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMITHDVDERNNGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI+S + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYEHSLRERRQNDNEYRQFLEFRDKLPIASMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D FS+YFGGCPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMIDTYPELHVILMSATIDTTLFSKYFGGCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157382882|gb|ABV48876.1| maleless [Drosophila simulans]
Length = 1298
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 251/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS + I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSLYRILPCHSQIPRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGSKCSDHVAMIVASQMWRREKQRGEHMEARFCEWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + + + R G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMITHDVDERNNGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 223 bits (569), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI+S + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYEHSLRERRQNDNEYRQFLEFRDKLPIASMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D FS+YFGGCPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMIDTYPELHVILMSATIDTTLFSKYFGGCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|157382884|gb|ABV48877.1| maleless [Drosophila simulans]
Length = 1298
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 251/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS + I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSLYRILPCHSQIPRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGSKCSDHVAMIVASQMWRREKQRGEHMEARFCEWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + + + R G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMITHDVDERNNGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 223 bits (567), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI+S + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYEHSLRERRQNDNEYRQFLEFRDKLPIASMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D FS+YFGGCPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMIDTYPDLHVILMSATIDTTLFSKYFGGCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|385305888|gb|EIF49831.1| atp-dependent rna [Dekkera bruxellensis AWRI1499]
Length = 1470
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 215/394 (54%), Gaps = 25/394 (6%)
Query: 543 IDLV--LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
DL+ L++ + +K+ + DG+IL+FLPG +I++ ++ P S+F +PLHS
Sbjct: 872 FDLIAELVQXIDKKLXESNSDGSILIFLPGVMEISRCLSKISDLP--GGXSRFWGLPLHS 929
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
V S Q+KVF PP G RKI+ STN+AET++TI D V VID+GR+K YD + + L
Sbjct: 930 GVSSNDQRKVFNSPPRGKRKIVASTNVAETSVTIPDAVAVIDTGRVKTIRYDVKADTTRL 989
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQ--LRAASLPDFQVPEIKRIPIEELCLQVK 718
W S+A QR GRAGR + G+CYHLY++ + LP +PEIKR P+ +CL VK
Sbjct: 990 VEGWSSRAEISQRRGRAGRLREGLCYHLYTKETIEERMLPQ-PIPEIKRTPLGSVCLVVK 1048
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
+ + N+ FLQ+ LDPP + + +A+ +L +IGAL B +T LG+ L
Sbjct: 1049 AMGIS-NVYRFLQEGLDPPSKLNVDSALQMLTEIGALHNBH-LTALGKYXSLLPTDMKSG 1106
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K+L ++ L CL+ LTLA S +PF +K + KF GQ D +A+
Sbjct: 1107 KLLLYSTLFGCLESGLTLASISVTGNPFFRSREMRDKVKRVQTKFS-----DGQGDMIAI 1161
Query: 839 IAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN 898
+ A+E + + ++ F + +S M + R Q +EL GFIP S H
Sbjct: 1162 LNAYEQYSELRNSSEKRRFLDENCLSWKTMKDIQSTRVQYVSELQDLGFIPMGYS--RHR 1219
Query: 899 ARVPG---------IIHAVLMAGLYPMVARLRPP 923
+ P I+ A++ A L+P VAR++PP
Sbjct: 1220 DKYPAFNRHSKDYPILCAIVTASLFPHVARVQPP 1253
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 147/277 (53%), Gaps = 25/277 (9%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG 233
K A L +++ R LP + + SN+ +I+GETG GK+TQ+ QF+L+ + +
Sbjct: 623 KHAELHXMIKXRKNLPAWRKMXDLVKVIQSNRACIITGETGSGKSTQIVQFVLDSLCAXB 682
Query: 234 E-TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLL 292
+ +CTQPRRISA +A+R+S ER G+ +GY IR E++ K + I F T GVLL
Sbjct: 683 DFETNXICTQPRRISAIGLADRVSQERASKCGEEVGYIIRGENRTSKSTRITFVTTGVLL 742
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R++ S L +K+ L +I VDE+HER SDF+L I++ M+ +P L +
Sbjct: 743 RMIQS-----LYSXEQNGSKNFFKHLKYIFVDEVHERSIDSDFLLIILKQMIRKFPDLHV 797
Query: 353 ILMSATLD---ADRFSQYFGGCPV-IQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASL 408
+LMSAT+D F Y P + + G T+P++ FYL+ +LS L+ + D +
Sbjct: 798 VLMSATIDLSTXKSFFDYTNKPPAHVHIEGRTFPIQDFYLDSILSDLQFTITTPRD--EV 855
Query: 409 IVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELV 445
I P D + N FD++ ELV
Sbjct: 856 IKPKADSRYFND-------------GNINFDLIAELV 879
>gi|212530752|ref|XP_002145533.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210074931|gb|EEA29018.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 1346
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 229/421 (54%), Gaps = 32/421 (7%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ LI +R I DSE G IL+FLPG +I++ + + A P +PL
Sbjct: 807 INYDLIVSTVRHI--DSELGDDPGGILIFLPGTMEIDRCLNAIKAIPNLH------ALPL 858
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + QK+VF P G RK+I +TN+AET+ITIDDVV VID+GR+KE S+DP +NV
Sbjct: 859 HASLLPADQKRVFNPAPKGKRKVIAATNVAETSITIDDVVAVIDTGRVKETSFDPKDNVV 918
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
LQ W S+A+ KQR GRAGR +AG CY L+++ +++ PEI+R+P+E+LCL V
Sbjct: 919 KLQEVWASQAACKQRRGRAGRVKAGKCYKLFTRRVESNMAPRPDPEIRRVPLEQLCLSVV 978
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
++ N DFL TL PP ++ + A+ +L IGAL + K+T LG + + +
Sbjct: 979 AMNSIQNAADFLANTLTPPETIAVEGALGLLHSIGALD-NHKLTALGRHMSMIPADLRCA 1037
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K++ + + CLD +T+A R PF +SP +K+ AA S GG D L
Sbjct: 1038 KLMVYGSIFGCLDACVTIASILIARSPF---VSPRDKREEAAAARAAFSRGGG--DLLTD 1092
Query: 839 IAAFECW-KNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP----ED 891
+AA++ W + +K G Q +CS+ F+S + + R QL T L G +P +
Sbjct: 1093 LAAYQQWSERSKSSGFWQSNSWCSENFLSHQTLREISSNRAQLLTSLKDAGILPFEYQQG 1152
Query: 892 VSSCS---HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
SS + N+ ++ A++ P +A++R P K +F + G + L P +
Sbjct: 1153 TSSATRWDRNSNNTPLLQALIAGSFNPQIAQIRFPDK---KFAASMTGT-IELDPDARTI 1208
Query: 949 K 949
K
Sbjct: 1209 K 1209
Score = 186 bits (473), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 12/215 (5%)
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCT 241
+R LP + ++ I V+S QV +ISGETG GK+TQ QF+L+ + + G+ IVCT
Sbjct: 562 QRQSLPAWAMQEAIIQCVNSYQVTIISGETGSGKSTQSVQFILDDLLKRDLGDVVNIVCT 621
Query: 242 QPRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGV 300
QPRRISA +A+R+S ER ++GD +GY IR +SK + I F T GVLLR L +
Sbjct: 622 QPRRISALGLADRVSDERCSSVGDEVGYIIRGDSKVKSGRTKITFMTTGVLLRRLQTA-- 679
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E+S+ AK VS +TH++VDE+HER +DF+LA++RD+L L++ILMSATLD
Sbjct: 680 ---PESSDDIAKS-VSDITHVVVDEVHERSLDTDFLLALLRDILNRRDDLKVILMSATLD 735
Query: 361 ADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVL 392
AD F QYFGG + +PG T+PV+ +Y++D+L
Sbjct: 736 ADIFMQYFGGPSRVGRVNIPGRTFPVEDYYVDDIL 770
>gi|427777633|gb|JAA54268.1| Putative deah-box rna helicase [Rhipicephalus pulchellus]
Length = 1270
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/444 (34%), Positives = 236/444 (53%), Gaps = 25/444 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A ++ + + LIE LL I E GA+L+FLPGW I L +P F +S++
Sbjct: 604 MAQLDEKTLSFELIEALLLHIRNMPEKGAVLIFLPGWNLIFALMKHLQQHPTF-GSSQYQ 662
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P Q KVF+ P K+ILSTNIAET+ITI+DVV+VIDS + K K + +
Sbjct: 663 ILPLHSQIPREDQHKVFRPVPENVTKVILSTNIAETSITINDVVFVIDSCKAKMKLFTSH 722
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + + SK + +QR GRAGR + G C+HL S+ R L ++ PEI R P+ EL
Sbjct: 723 NNMTNYATVFASKTNLEQRRGRAGRVRPGYCFHLCSKARYEKLENYTTPEIFRTPLHELA 782
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL K L+PP + + ++L+++GAL++ ++T LG+ L L +
Sbjct: 783 LAIKLLRLG-DITKFLSKALEPPPMDAVIESEVLLREMGALTVMGELTALGKILARLPIE 841
Query: 775 PLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
P + KML ++ D T+ A +S + +PF P K+ A + A G S
Sbjct: 842 PRLGKMLILGLIFGVGDALCTISANSSTFPEPFDTPFP---KRLAYVQRRFFA---GRWS 895
Query: 834 DQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
D + ++ F W+ A +G+ EA FC Q+ +S + + + QL+ L+ F
Sbjct: 896 DHITLLNVFNQWEQAHMQGEYAEASFCEQFSISMPTLRITYDAKNQLRELLMSADFPETA 955
Query: 892 VSSCSHNARVPGI------IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
++ ++N GI I A+L+ G YP + HK R+ + T + + +H S
Sbjct: 956 LAPDAYN--FGGIDPKLDMIVALLVLGHYPNICY----HKEKRKVLTTDNRSAL-IHKTS 1008
Query: 946 LN-FKLSFKKTDDCPLMVYDEITR 968
+N L P V+ E R
Sbjct: 1009 VNCTNLPASNRFASPFFVFGEKIR 1032
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 153/234 (65%), Gaps = 19/234 (8%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
+ + +++ D L+++++ER +LP+ + D I + + VV+I G TGCGKTTQVPQ+
Sbjct: 344 LNNYNQQVDHDPQLKKMLDERYQLPVYNSYDSILDAIHQSSVVIIRGATGCGKTTQVPQY 403
Query: 225 LLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HS 281
+L+ ++G C IV TQPRRISA SVAERI+ ER E +G + GY +R ES + +
Sbjct: 404 ILDSYINQGVGAECCIVVTQPRRISAVSVAERIAEERSEQLGQSAGYSVRFESVLPRPYG 463
Query: 282 SIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR 341
SI+FCT GVLLR L EA + ++H+I+DEIHERD +DF++ +IR
Sbjct: 464 SILFCTVGVLLRKL---------EAG-------LRGVSHVIIDEIHERDVNTDFIMVVIR 507
Query: 342 DMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
DM+ ++P LR+ILMSAT+D F YF CPVI+V G +PV+ F+LED + ++
Sbjct: 508 DMVRAFPQLRVILMSATIDVTLFQSYFENCPVIEVEGRAHPVQEFFLEDCIELV 561
>gi|195027549|ref|XP_001986645.1| GH20409 [Drosophila grimshawi]
gi|193902645|gb|EDW01512.1| GH20409 [Drosophila grimshawi]
Length = 1335
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 258/496 (52%), Gaps = 33/496 (6%)
Query: 515 KKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDI 574
+ ++ D QQ + +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 608 ESNLNKVCEDKYSQQTRNA-MALLSESDVSFELLESLLMHIKSKNIPGAILVFLPGWNLI 666
Query: 575 NKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITI 634
L ++ F + ++ I+P HS +P Q+KVF+ P G KIILSTNIAET+ITI
Sbjct: 667 FALMKYLQSSTNFGN-PQYRILPCHSQIPRDDQRKVFESVPDGVTKIILSTNIAETSITI 725
Query: 635 DDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA 694
DD+V+V+D + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R
Sbjct: 726 DDIVFVVDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARF 785
Query: 695 ASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGA 754
A L + PE+ R P+ E+ L VKLL I FL K L+PP + A ++L+D+
Sbjct: 786 AQLEENLTPEMFRTPLHEIALTVKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLRDMRC 844
Query: 755 LSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC-ASDYRDPFTLPISPN 813
L ++ +T LG L L + P + KM+ + C D +A +S + + F L I
Sbjct: 845 LDANDNLTPLGRLLARLPIEPRLGKMMVLGAVFGCADLVAGMASYSSTFSEVFALDIG-- 902
Query: 814 EKKRATAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNM 870
+++ A K +L G + SD +A+I A + W+NAK RG +EA FC + MN+
Sbjct: 903 QRRLANHQK----ALSGRKCSDHVAMIVASQLWQNAKHRGEQEEARFCDWKGLQMSTMNV 958
Query: 871 LLGMRKQLQTELIKNGFIPEDV---SSCSHNARVP--GIIHAVLMAGLYPMVARLRPPHK 925
+ + QL L + GF PE+ NA P + A+L GLYP + HK
Sbjct: 959 MYDAKMQLLDLLQQAGF-PEECMLGHQVDANANDPELDVATALLCLGLYPNIC----VHK 1013
Query: 926 NGRRFVETAGGAKVRLHPHSL---NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVG 982
R+ + T A + LH S+ N ++F P V+ E R + + ++V
Sbjct: 1014 EKRKVLTTESKAAL-LHKTSVNCSNLAVNFPY----PFFVFGEKIRTR-AVSCKQMSMVT 1067
Query: 983 PLPLLLLAT-EIAVAP 997
PL ++L + +I +AP
Sbjct: 1068 PLQVMLFGSRKIDLAP 1083
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 175/278 (62%), Gaps = 31/278 (11%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L R E DA RQ +E R KLPI++ + I + ++ +QVV+I G TGCGKTTQ+ Q++L+
Sbjct: 363 LRDRRESDAEYRQFLEFRDKLPIAAMRSEIMNAINESQVVIIRGNTGCGKTTQIAQYILD 422
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIV 284
+ G+ I TQPRRISA SVAER++ ER E + D++GY +R ES + + +I+
Sbjct: 423 DYITSGQGGYANIYVTQPRRISAISVAERVARERCEQLSDSVGYSVRFESVFPRPYGAIL 482
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT GVLLR L EA + ++HIIVDEIHERD SDF+L I+RDM+
Sbjct: 483 FCTVGVLLRKL---------EAG-------LRGISHIIVDEIHERDVNSDFLLVILRDMV 526
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI---LKSAESN 401
+YP L +ILMSAT+D FS+YFG CPV++VPG +PV+ F+LED++ + + SAES+
Sbjct: 527 ATYPDLHIILMSATIDTTLFSKYFGDCPVLEVPGRAFPVQQFFLEDIIQMTGFVPSAESH 586
Query: 402 HL-----DSASLIVPNEDPELTEENKSTLDEAISLAWS 434
D L++ + D EE +S L++ +S
Sbjct: 587 RKRKEADDEERLLLKDND----EEGESNLNKVCEDKYS 620
>gi|71655878|ref|XP_816495.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70881627|gb|EAN94644.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 1262
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 273/510 (53%), Gaps = 31/510 (6%)
Query: 510 VAQIIKKHMENALS-DSMKQQLLDKYLATV------NPE-LIDLVLIEQLLRKICMDSED 561
+A + +K +N S D + +K ATV +PE L+ L+ +L+ I S D
Sbjct: 518 LANVSEKKSKNGNSEDRNDGSIFEKIKATVFGETDNDPEVLVPYDLVFKLISYIHASSHD 577
Query: 562 --GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
+IL+FLPGW I++ + +P R+ S ++ LHS + + +Q++VF RPP R
Sbjct: 578 LSESILIFLPGWASISRVNTMIQRSPIARELS---VLQLHSSLTAAEQQRVFYRPPKRFR 634
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K++LSTNIAE ++TIDD+VYVIDS K SYD N S L+++++SKA+ QR GRAGR
Sbjct: 635 KVVLSTNIAEASVTIDDIVYVIDSCLTKGTSYDARGNTSVLKATFISKANGMQRRGRAGR 694
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
C+AG+C HL + LP+F +PEI R P+E++CLQVK L P+ L + +DPP +
Sbjct: 695 CRAGVCVHLLPRSAYEKLPEFLLPEIMRSPLEDVCLQVKALKPDEVCAKVLSRAMDPPPA 754
Query: 740 VTIRNAIIVLQDIGALSLD-EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
+ +A+ L+D+GA + + E++T LG L L +HPL+ KML A + L+P +T+A
Sbjct: 755 DSTEHAVRFLKDMGAFTSEKEQMTNLGRALSKLPIHPLLGKMLLAAACLGVLEPVVTIAA 814
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGG-QSDQLAVIAAFECWKNAKQRGQEAWF 857
+ PF P+ P++K A + + S+ G SD L+V+ F+ WK + A +
Sbjct: 815 YLSGKSPFIKPL-PHQK---NAMRNAVQSIDNGLLSDHLSVMKLFDEWKKS---NCSADY 867
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS----CSHNARVPGIIHAVLMAGL 913
Q F V+ + +RKQL L+K+ + V S ++ G++ V + L
Sbjct: 868 AMQNFADQTVLRSMDRIRKQL-LRLVKDSSLLRKVEDPMRMASRHSSNLGLVRLVALWSL 926
Query: 914 YPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC---PLMVYDEITRGD 970
YP +A + R+ E ++ ++ L+FK DD + Y E +
Sbjct: 927 YPRIASVEYRANRSRKRPEIFCWDN-KVAQCAMGSALAFKNRDDFRDRAFVFYHERMYLE 985
Query: 971 GGMHVRNCTVVGPLPLLLLATEIAVAPAPD 1000
+ V + + V P+ + L E A+ P D
Sbjct: 986 ANLTVFDASAVTPVEVALCLREFALRPLTD 1015
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 207/440 (47%), Gaps = 80/440 (18%)
Query: 1 MGKKKQKKAEQQQQKQQQQQSPTVAEATRIRISQILDGFLASKDEVY------------- 47
MG ++ + Q Q+Q S V ++S + + +K +Y
Sbjct: 95 MGHERSRGMMVNQNPFQEQNSVPVTAVANSKVSICNEEGVWTKKNLYAMVKAFVDDPNAE 154
Query: 48 --TFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLT 105
+F LS ER +VHE+ + +S+G +R +++ K +K +E +
Sbjct: 155 EMSFPPTLSAAERHMVHEIALNFNLHHRSAGCKSERVLTLKKIGSIKNQEKDRE---NAA 211
Query: 106 FSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKV 165
F+ G ++ D Y P E + K+R + + P + K +K
Sbjct: 212 FN-GDRVKTID---GYQGAQRLPDEYI---------KSRMNEISLLLGPFLRKMYSQLKA 258
Query: 166 ES---LTSRI---------------EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVV 207
+ L +R + R++ E R LP +D I + + N V+
Sbjct: 259 TAAKPLRNRHLVVVQPGLMKAPQGNTQHQRYRELQEFRRSLPSYKRRDEIINALKQNNVL 318
Query: 208 LISGETGCGKTTQVPQFLLE-HIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDN 266
++SG+TGCGKTTQ+PQ L + ++ K +I+CTQPRRISA SVA+R++ ERGE G++
Sbjct: 319 IVSGDTGCGKTTQIPQILYDSEVFQKD--LEIICTQPRRISALSVAQRVAEERGETCGNS 376
Query: 267 IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEI 326
GY IR ++ + IV+ T G+LLR L P + VS IIVDE+
Sbjct: 377 CGYIIRFDNMTSPSTKIVYMTTGILLRRL-----------HTDPQLNGVSC---IIVDEV 422
Query: 327 HERDRYSDFMLAIIRDMLPSYP--------HLRLILMSATLDADRFSQYF----GG--CP 372
HERD +DF L ++RD L H+++++MSAT+ ++ + YF GG P
Sbjct: 423 HERDVETDFCLLLLRDRLIEQQRNNQLYKNHVKVVVMSATVQIEKVASYFVCVCGGRAPP 482
Query: 373 VIQVPGFTYPVKSFYLEDVL 392
+I +PG +PV+ +LE+ L
Sbjct: 483 IISIPGTLFPVEECFLEEAL 502
>gi|422295081|gb|EKU22380.1| deah (asp-glu-ala-his) box polypeptide 36 [Nannochloropsis gaditana
CCMP526]
Length = 2456
Score = 227 bits (578), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 270/541 (49%), Gaps = 90/541 (16%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDS------------EDGAILVFLPGWEDINKTRDR 580
K + V+ +++ L+E LLR I GAILVFLPG +I +R
Sbjct: 1841 KSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILER 1900
Query: 581 LLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYV 640
L FFRD +++ ++PLHS + +Q+KVF+RP G RK+ILSTNIAET++T+DDVVYV
Sbjct: 1901 LRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYV 1960
Query: 641 IDSGRMKE-KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-P 698
+D G ++E + L ++W +ASAKQR GRAGR G+C+ L+S+ +L
Sbjct: 1961 VDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMS 2020
Query: 699 DFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
+F VPE++R P+EELCLQ++ D + +FL K +PP V I A+ VL+++GAL+
Sbjct: 2021 EFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASA 2080
Query: 759 EK-------------------------VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
E +T LG L L + + KML FA L CLDP
Sbjct: 2081 EDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPV 2140
Query: 794 LTLACA-SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG 852
LT+A S + PF P + RA AK E+ QSD L ++ F+ +++A +G
Sbjct: 2141 LTVAAGLSGIKSPFLAPFGKEAEARAMHAKLEVR-----QSDFLTLVNTFQAYRSACLQG 2195
Query: 853 ---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-------PEDVSSCSHNA--- 899
+E FCS +F+S + + ++ Q L+ + P+ + S+ A
Sbjct: 2196 GAAEEHKFCSNHFLSKIALREMASLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALED 2255
Query: 900 --------RVPG----------IIHAVLMAGLYPMVAR--LRPPHKNGRRFVE--TAGGA 937
R G ++ AV+ AGLYP VA P KN + +A +
Sbjct: 2256 FMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADPSKKNPSLYHGPMSAPSS 2315
Query: 938 KVRLHPHSLNFKLSFKKTDDCPLMVYDE---ITRGDGGMHVRNCTVVGPLPLLLLATEIA 994
V LHP S+N+ +++ + P +V+ E TR ++ +VV P LLL +
Sbjct: 2316 PVYLHPSSVNYGVTYFTS---PWLVFHEKFHTTRA----YIAPTSVVSPYALLLFGGPLV 2368
Query: 995 V 995
V
Sbjct: 2369 V 2369
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 162/276 (58%), Gaps = 31/276 (11%)
Query: 124 DDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVE 183
+ GE G S++ +KT G R D ++ KA A + + A +++
Sbjct: 1514 EGGERGAPTRGTGSQR-EKTGGPRGDTALGERLRKAFEAKRGQ---------ARYQELAR 1563
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVCT 241
R +LP+++ ++ I +++ VV+ISGETGCGK+TQV Q++LE + KG +VCT
Sbjct: 1564 VRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGKGHNVNLVCT 1623
Query: 242 QPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGKHSSIVFCTNGVLLRLLV 296
QPRR++A S+AER++ E GE G +GY+IR+ESK + + FCT G+LLR L
Sbjct: 1624 QPRRVAAVSLAERVAQEMGEEGGAGGPGALVGYQIRMESKTTAATRLTFCTTGILLRKLQ 1683
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
+ D+S THII+DE+HER DF+L ++RD+L P LRL+LMS
Sbjct: 1684 TD--------------PDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPTLRLVLMS 1729
Query: 357 ATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
AT++AD FS YFG CPV +PG + V+ YLED +
Sbjct: 1730 ATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTI 1765
>gi|325088553|gb|EGC41863.1| DEAH box polypeptide 36 [Ajellomyces capsulatus H88]
Length = 1456
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 224/439 (51%), Gaps = 45/439 (10%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI LL I E AILVF+PG +I + D +L+ P F + S +VI L
Sbjct: 909 LDYKLIVSLLLAITTRKEFEQYSKAILVFMPGMAEIRRLNDEILSEPLF-NKSDWVIHAL 967
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 968 HSSIASEDQEKAFHVPPTGVRKIVIATNIAETGITIPDITAVIDTGKEKVMRFDEKRQLS 1027
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L S++++A+AKQR GRAGR Q G+C+HL+++ R L + Q PEI R+ +++L L+V
Sbjct: 1028 KLVESFIARANAKQRRGRAGRVQRGLCFHLFTKFRHDKLLAEQQTPEILRLSLQDLILRV 1087
Query: 718 KLLDPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
K+ CN +E L + +DPP IR AI +++ A S E +T LG L L +
Sbjct: 1088 KI----CNLGEVEQTLSEAIDPPSPKNIRRAIEAHKEVKAFSNTENLTPLGRLLAKLPLD 1143
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ K++ + CLD A+++A + PF + N ++ F+ + G SD
Sbjct: 1144 VFLGKLIIYGAFFKCLDSAVSIAAIVSSKSPFVNTVGSNTQRELAKLAFKRET---GSSD 1200
Query: 835 QLAVIAAFECWKNAKQR--GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
L V A+ WK + E+ FC + ++SS + + ++ QL T ++ +G + D
Sbjct: 1201 LLTVYNAYLSWKRHRSTPGMSESAFCRKNYLSSQTLQNIEDVKMQLLTSIVDSGLLNLDP 1260
Query: 893 SSCSH--NARVPG--------------------IIHAVLMAGLYPMVARLRPPHKNGRRF 930
+ AR G I+++V+ YP + +NG+ +
Sbjct: 1261 AEKDSLIRARFTGRQRQFFTVPKRMDINSENDIIVNSVIAWSFYPKLL-----SRNGKGW 1315
Query: 931 VETAGGAKVRLHPHSLNFK 949
A V LHP S+N K
Sbjct: 1316 RNVANNQTVSLHPTSVNKK 1334
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 151/243 (62%), Gaps = 23/243 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LPI FK I T+ SNQ ++I ETG GK+TQVP F+LE G CKI T+PR
Sbjct: 653 RKTLPIWQFKYQILDTLSSNQAIIICSETGSGKSTQVPSFILEKELLSGRDCKIYVTEPR 712
Query: 245 RISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E GE+ +G N +GY IRLESK + ++F T GV++R+L
Sbjct: 713 RISAMSLAKRLSDELGEDKNSVGTNRSLVGYAIRLESKISSSTRLIFATTGVVVRML--- 769
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
+P D +TH+++DE+HER SDF+L I+R ++ P L+L+LMSAT
Sbjct: 770 ---------ERPR--DFEDITHLVLDEVHERTIDSDFLLIILRRLMQERPDLKLVLMSAT 818
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELT 418
+DA RFS+Y G PV+ +PG T+PV+ YLED + I K +N SA + ++D EL
Sbjct: 819 VDAARFSKYLHGAPVLDIPGRTFPVEVKYLEDAIEITKYCPNNDGLSA---LTDDDDELP 875
Query: 419 EEN 421
+++
Sbjct: 876 DQS 878
>gi|390340054|ref|XP_003725156.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A-like
protein-like [Strongylocentrotus purpuratus]
Length = 1291
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 240/484 (49%), Gaps = 27/484 (5%)
Query: 515 KKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDI 574
+++M +S +Q + L ++ + ++ LIE LL I GAIL FLPGW I
Sbjct: 516 EENMNKNISHEYSEQT-RRALMQMSEKEMNFDLIESLLTYIGTLGVPGAILFFLPGWNWI 574
Query: 575 NKTRDRLLANPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAI 632
L +P F RD F I+PLHS +P +Q +VF P G KIILSTNIAET+I
Sbjct: 575 FALMRHLQEHPKFGGRD---FCILPLHSQIPKEEQHRVFDTMPEGVTKIILSTNIAETSI 631
Query: 633 TIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQL 692
TI+DVVYV+D + K K + +NN++ W SK + +QR GRAGR + G C+HL S+
Sbjct: 632 TINDVVYVVDICKAKMKLFTSHNNMTNYAIVWASKTNLEQRRGRAGRVRPGFCFHLISRP 691
Query: 693 RAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDI 752
R L VPEI R P+ EL L +KLL I +FL K ++PP ++ A+ L+++
Sbjct: 692 RFDKLEQHTVPEIFRTPLHELALTIKLLRLG-TIAEFLGKAIEPPPLDSVVEAVAALKEM 750
Query: 753 GALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISP 812
AL E++T +G L + + P + KM+ ++ D +A + + + F
Sbjct: 751 HALDHQEELTPVGRILAKMPIEPRLGKMIILGCVLFVGDALAIIASSMCFPEIFITFAGK 810
Query: 813 NEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNM 870
+ SD +A +AAF+ W+ Q G++ +C + + M
Sbjct: 811 VSNVHRNYCRMR-------HSDHIATLAAFQEWEEQLQSGEDTAMNYCDHKGLQMMTLRM 863
Query: 871 LLGMRKQLQTELIKNGFIPEDVSSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKN 926
+ R QL+ L+ GF E ++ N P I+ ++L GL+P V HK
Sbjct: 864 IYEARNQLKDILVMEGFPEECLAPQIFNFHAPDPKLDIVVSLLTTGLWPNVCF----HKE 919
Query: 927 GRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPL 986
R+ + T A + +H S+N+ F + P V+ E R + + T+V PL L
Sbjct: 920 KRKLLTTENKAAL-IHKSSVNYS-KFDQQFPSPYFVFGEKIRTR-AVSAKGMTMVSPLHL 976
Query: 987 LLLA 990
LLL
Sbjct: 977 LLLG 980
Score = 189 bits (481), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 136/218 (62%), Gaps = 19/218 (8%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKI 238
I EER LPI + I +D N VV+I G TGCGKTTQVPQF+L+ KG C I
Sbjct: 290 IQEERQSLPIFQTEKQILDAIDQNPVVVIRGATGCGKTTQVPQFILDSYIRGGKGAECNI 349
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLES-KGGKHSSIVFCTNGVLLRLLVS 297
TQPRRISA S+AER++ ER E +G + GY +R ++ + +++F T G LLR L
Sbjct: 350 AVTQPRRISAISIAERVAYERTEPLGVSTGYSVRFDTVRPRPLGAMLFMTVGTLLRKL-- 407
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
+ + ++H+IVDEIHERD +DF+L ++RDML + P +R+ILMSA
Sbjct: 408 --------------EAGLRGISHVIVDEIHERDLNTDFLLVVLRDMLKANPGMRIILMSA 453
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
T+D FS YF CPVI+V G + V+ +YLEDV+ +L
Sbjct: 454 TIDTTMFSHYFLDCPVIEVYGRAHAVQEYYLEDVVQML 491
>gi|47211093|emb|CAF89910.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1021
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 163/246 (66%), Gaps = 22/246 (8%)
Query: 152 CKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISG 211
C P+ E+ E L +++ D +L++I+ ER +LP+ F++ I ST+D+N VVLI G
Sbjct: 142 CTPEQISKELH---EELMCQLDHDESLQKILVERDQLPVKQFEEEILSTIDTNSVVLIRG 198
Query: 212 ETGCGKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGY 269
TGCGKTTQVPQF+L+ G C IV TQPRRISA SVAER++ ERGE+ G + GY
Sbjct: 199 ATGCGKTTQVPQFILDRFIKGGRASDCNIVVTQPRRISAVSVAERVAYERGEDPGKSCGY 258
Query: 270 KIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
+R ES + H+SI+FCT GVLLR L + + ++H+IVDEIHE
Sbjct: 259 SVRFESVLPRPHASILFCTVGVLLRKL----------------EAGIRGISHVIVDEIHE 302
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
RD +DF++ ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++L
Sbjct: 303 RDINTDFLIVVLRDVVQAYPEVRIVLMSATIDTTMFREYFFNCPIIEVFGRTFPVQEYFL 362
Query: 389 EDVLSI 394
ED + +
Sbjct: 363 EDCIQM 368
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 203/412 (49%), Gaps = 38/412 (9%)
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P +Q++VF+ P K+ILSTN+AET+ITI+DVVYVIDS + K K + +NN++
Sbjct: 437 IPREEQRRVFEPVPDNVTKVILSTNLAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYA 496
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+ W SK + +QR GRAGR + G C+HL S+ R L PEI R P+ E+ L +KLL
Sbjct: 497 TVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLESHMTPEIFRTPLHEVALSIKLLR 556
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNA---------------IIVLQDIGALSLDEKVTELGE 766
+I FL K ++PP + A ++ L + ++T LG
Sbjct: 557 LG-SIGHFLSKAIEPPPLDAVIEAEHTLKGMATPPPGPLLMFLSSWMLWTATTELTPLGR 615
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L + P + KM+ + D T++ AS + +PF NE KR + F
Sbjct: 616 ILARLPIEPRLGKMMILGCIFHVGDAMCTISAASCFPEPFI-----NEGKRLS---FVHR 667
Query: 827 SLYGGQ-SDQLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELI 883
+ G + SD +A+++ F+ W + + G+EA FC ++ + M + QL+ L+
Sbjct: 668 NFTGSRFSDHVALLSVFQAWDDIRMNGEEAESSFCEHKRLNMSTLRMTWEAKVQLKEILV 727
Query: 884 KNGFIPEDVSSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKV 939
+GF E + + P ++ ++L G YP V HK R+ + T G A +
Sbjct: 728 NSGFPEESLMTQMFTTVGPDNNLDVVVSLLTFGSYPNVCF----HKEKRKILTTEGRAAL 783
Query: 940 RLHPHSLNFKLSFKK-TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+H S+N + T P V+ E R + + T+V PL LLL A
Sbjct: 784 -IHKSSVNCPFGSQDLTFPSPFFVFSEKIRTR-AISAKGMTLVTPLQLLLFA 833
>gi|194759979|ref|XP_001962219.1| GF14548 [Drosophila ananassae]
gi|190615916|gb|EDV31440.1| GF14548 [Drosophila ananassae]
Length = 941
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 267/499 (53%), Gaps = 25/499 (5%)
Query: 505 ENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAI 564
E Q + +I+ ++ + +S ++LDK + DL I L+ IC DGAI
Sbjct: 366 EQQMQFMAMIEPYIR-TIRNSYDGRVLDKLRLPESEGCEDLGFIADLVYYICDREPDGAI 424
Query: 565 LVFLPGWEDINKTRDRLLANPFF----RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
LVFLPG++ I++ + LL P R V+ LHS++ S +Q+ VF+RPP G RK
Sbjct: 425 LVFLPGYDKISQLYN-LLDKPSIPLGQRWRDHMVLFALHSLIHSSEQQAVFRRPPTGKRK 483
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
+I+S+ I+E+++TIDDVVYVI+ G+ K +YD N+ TL+ WV+KA+ +QR GRAGR
Sbjct: 484 VIISSIISESSVTIDDVVYVINCGKTKCTNYDIETNIQTLEEVWVTKANTQQRKGRAGRV 543
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSV 740
+ GICY+L+S+ R + + PEI R +E + L +KLL + N +FL+ ++ P
Sbjct: 544 RPGICYNLFSRARETRMEEVPTPEILRSKLESIILNLKLLHID-NPYNFLRTLINAPNPE 602
Query: 741 TIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACAS 800
I+ + +L +GAL + +T LG L L + P M KM+ + L CLDP + A A
Sbjct: 603 AIKIGVDLLMRMGALDSNGILTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAAL 662
Query: 801 DYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQ 860
Y+ PF P+ ++ R K +LA +SD L V ++ ++ + FC +
Sbjct: 663 SYKSPFYSPLG--QESRLDEIKRDLAR--NMRSDHLLVHNTVIGFRESRSTRSDRDFCRK 718
Query: 861 YFVSSGVMNMLLGMRKQLQTELIKNGFIP----EDVSSCSHNARVPGIIHAVLMAGLYPM 916
F+S M + M+ Q L + F+ D S +++++P ++ A++ AGLYP
Sbjct: 719 NFLSFMTMQQIENMKGQFSELLFNSKFVTSKNCRDGISNMNSSKIP-LLRAIIGAGLYPN 777
Query: 917 VARLRPPH--KNGRRFVE---TAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDG 971
+A +R KN R + T G +V HP S+N + ++D VY + R
Sbjct: 778 MAHMRKSRQLKNKVRAIHHMTTDDGRRVNFHPSSINSGGTGFESD---YFVYFQRQRST- 833
Query: 972 GMHVRNCTVVGPLPLLLLA 990
+ + + T+V P+ LL+
Sbjct: 834 DLFLLDSTMVFPMALLIFG 852
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 17/218 (7%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETC 236
R+ + R LP + I V NQV+LI G TGCGKTTQVPQ LL+ S +G +C
Sbjct: 141 RKRMAGRHNLPTMKYATEILQAVQENQVILIVGSTGCGKTTQVPQILLDDAISNGRGSSC 200
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLL 295
IVCTQPRRISA ++AE + ER E +G ++GY+IRLES+ + +SI +CT GVLL+ L
Sbjct: 201 TIVCTQPRRISAITIAEWVGYERCEGLGQSVGYQIRLESQKARDRASITYCTTGVLLQKL 260
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
QG P ++S L I+DEIHER +D ++ +++ +LP P L++ILM
Sbjct: 261 --QG---------DPLMHNLSVL---ILDEIHERSVETDLLMGLLKAILPHRPELKVILM 306
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
SAT+ F YF CP+ ++ G +PV+ YLEDVL+
Sbjct: 307 SATVREQDFCDYFDNCPMFRIEGVMFPVQMLYLEDVLA 344
>gi|116206782|ref|XP_001229200.1| hypothetical protein CHGG_02684 [Chaetomium globosum CBS 148.51]
gi|88183281|gb|EAQ90749.1| hypothetical protein CHGG_02684 [Chaetomium globosum CBS 148.51]
Length = 1355
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 216/395 (54%), Gaps = 30/395 (7%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
G IL+FLPG +IN+ + L + P ++PLH+ + + +QKKVF P G RK+
Sbjct: 848 GGILIFLPGVAEINRACNALRSAPSLH------VLPLHASLETREQKKVFATAPQGRRKV 901
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
+++TN+AET+ITIDD+V VIDSGR+KE S+DP NN+ L+ +W S A+ KQR GRAGR Q
Sbjct: 902 VVATNVAETSITIDDIVAVIDSGRVKEISFDPANNMRKLEETWASLAACKQRRGRAGRVQ 961
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVT 741
AG CY LY++ + + PEI+R+P+E+L L V+ + +I FL + PP +
Sbjct: 962 AGKCYKLYTRNLEHQMAERPEPEIRRVPLEQLSLAVRAMGIR-DISHFLARAPTPPEATA 1020
Query: 742 IRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASD 801
+ AI +L+ +GAL DE +T LG++L + K++ + + CLD +T+A
Sbjct: 1021 VEGAITMLRRMGALDGDE-LTALGQQLAMIPADLRCGKLMVYGAIFGCLDDCVTIAAILS 1079
Query: 802 YRDPFTLPISPNEKK-RATAAKFELASLYGGQSDQLAVIAAFECWKNA------KQRGQE 854
+ PF +SP EK+ A AK A G D L + A++ W N + R
Sbjct: 1080 TKSPF---LSPAEKRGEAKEAKMRFAR---GDGDLLTDLRAYQEWDNMMADRSIQHRRVR 1133
Query: 855 AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLY 914
W C + F+S ++ + R Q T L + G P S+ +A P ++ A+ +
Sbjct: 1134 QW-CDENFLSFPTLSDIASTRSQYYTSLSEMGIRP---STSQPSASTP-LLRALTASAFA 1188
Query: 915 PMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
P + R++ P K +F + GA V L P + K
Sbjct: 1189 PQLCRIQFPDK---KFATSVSGA-VELDPEAKTIK 1219
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 153/256 (59%), Gaps = 22/256 (8%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
S+ E + E+L N ++++ +R +LP + + TV NQV +ISGETG G
Sbjct: 556 SRQEWVARTEAL--------NYKKMLSQRERLPAWQVRADVIRTVSENQVTIISGETGSG 607
Query: 217 KTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
K+TQ QF+L+ ++SKG I+ TQPRRISA +A+R++ ER +G +GY IR E
Sbjct: 608 KSTQSVQFILDDLYSKGLGGGANIIVTQPRRISALGLADRVAEERCTQVGQEVGYTIRGE 667
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
S+ + I F T GVLLR L + G R+++ + A DVS H++VDE+HER +D
Sbjct: 668 SRTSPITKITFVTTGVLLRRLQTSG-GRVEDVVSSLA--DVS---HVVVDEVHERSLDTD 721
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG------CPVIQVPGFTYPVKSFYL 388
F+L+IIRD+L L+LILMSATLDA F YF ++++ G TYPV+ +YL
Sbjct: 722 FLLSIIRDVLYKRQDLKLILMSATLDAASFRDYFMADQQNVTVGLVEISGRTYPVQDYYL 781
Query: 389 EDVLSILKSAESNHLD 404
+DV+ + + N D
Sbjct: 782 DDVIRMTGFSVGNRYD 797
>gi|170581438|ref|XP_001895682.1| hypothetical protein [Brugia malayi]
gi|158597280|gb|EDP35470.1| conserved hypothetical protein [Brugia malayi]
Length = 1315
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 227/428 (53%), Gaps = 41/428 (9%)
Query: 530 LLDKYLATVNPELIDLVLIEQLLRKI--CMDSE-DGAILVFLPGWEDINKTRDRLLANPF 586
L+D Y+ + + ++ V + + I CMDS G+ILVFLPG+EDI R++ +
Sbjct: 436 LVDSYMISGGEQWLESVDTDLTVAVINYCMDSPVHGSILVFLPGYEDILAVREKAIK--M 493
Query: 587 FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646
++K I LHS + + Q++VF+ G RK+ILSTNIAE ++TIDDVV+VID G++
Sbjct: 494 QGCSTKPAIFTLHSQMGNQDQQRVFEPVGRGYRKVILSTNIAEASLTIDDVVFVIDCGKV 553
Query: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIK 706
KEK YD +S L+ +W++K++A+QRAGRAGRC++G C+ L++ A + Q+PE+K
Sbjct: 554 KEKIYDHSTRISQLKMTWIAKSNAEQRAGRAGRCRSGYCFRLFTMEDYARMNPTQLPEMK 613
Query: 707 RIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL---------- 755
R I E+CL K+ P ++ FL +PP ++ I + L+ IGA+
Sbjct: 614 RSAIHEVCLHAKMFAPRKYSVRQFLLNAPEPPAAIAIDRSFEFLEQIGAVFKCRQESSQM 673
Query: 756 ---------------SLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACAS 800
+ + +T+LG + L + P +++ L F I + CL P LTL
Sbjct: 674 SHLTDNSYFSNARDRNGEPDLTDLGRHIVQLPLCPQLARFLLFGICLKCLSPVLTLVATL 733
Query: 801 DYRDPFTLPISPNEKKRATAAKFELASLYGG--QSDQLAVIAAFECWKNAKQRGQEAWFC 858
+RDPF LP S ++R +A ++ G SD + + + + GQ FC
Sbjct: 734 SHRDPFVLPPSGEREERNSAMM--ARDIFAGFDYSDHMTFLRIYNAFIKLPPHGQSN-FC 790
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC-----SHNARVPGIIHAVLMAGL 913
++S M M++G+R+QL EL + +P + S + + +I ++AG
Sbjct: 791 MSNYLSLNAMRMIVGIRQQLFMELQRLRLLPANCRSADDPDLNRYSNSWPMIQGAIVAGS 850
Query: 914 YPMVARLR 921
YP + R
Sbjct: 851 YPNIGFTR 858
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 18/173 (10%)
Query: 226 LEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVF 285
+E + + +I CTQPRR+ +V+ R++ ER E +G IGY IRLE K + + + +
Sbjct: 1 MEDAAERQQAVRIFCTQPRRLPVLAVSARVAKERNEKLGSTIGYHIRLEQKTSEQTVLTY 60
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT+GVLLRLL + + S ++HII+DEIHER++ +D++L +R L
Sbjct: 61 CTSGVLLRLLTN--------------DTNASNISHIILDEIHEREQKTDYLLIALRQALK 106
Query: 346 SYPHLRLILMSATLDADR--FSQYFGGCPV--IQVPGFTYPVKSFYLEDVLSI 394
+ LR+ILMSAT++ R F +YFG V + +P + V+ FYL ++L++
Sbjct: 107 NRDDLRIILMSATMEESRELFRRYFGPGNVFCLDIPSTLHKVEMFYLPEILAL 159
>gi|409052089|gb|EKM61565.1| hypothetical protein PHACADRAFT_204735 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1181
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 162/503 (32%), Positives = 269/503 (53%), Gaps = 51/503 (10%)
Query: 523 SDSMKQQLLDKYLATVNPELIDLVLIEQLLRKIC-MDSEDGAILVFLPGWEDINKTRDRL 581
+D+ + LL + +D+ LI L++ I ++ G IL+FLPG ++I + L
Sbjct: 625 ADNTDESLLLALHVISKADRVDVELIAALVKHITESNTNPGGILIFLPGVQEIQACLNAL 684
Query: 582 LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
+ P + +PLH+ + S +Q+ VF P PG KII +TN+AET+ITIDDV+YVI
Sbjct: 685 KSVPNAK------ALPLHANLSSDEQRAVFA-PTPGW-KIIAATNVAETSITIDDVIYVI 736
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ 701
DSG++KE YDP N ++ L+ WV++A+A+QR GRAGR + GICY LY++ + +++ F
Sbjct: 737 DSGKVKEAQYDPENGLTKLEEQWVTRAAARQRRGRAGRTKPGICYKLYTRKQESNMQPFP 796
Query: 702 VPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
+PEIKR+ +E + L VK+ + +++DF+ + +DPP + +A+ VL ++GA+S + +
Sbjct: 797 IPEIKRVALESVALSVKVT--HGDVKDFVSQAIDPPAMSALDHALAVLDELGAISPEGNL 854
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T +G+ L L V + KML + CL P LT A + F P+ E+ A
Sbjct: 855 TPMGQYLAMLPVDLRLGKMLVLGAIFQCLGPILTAAAIMSSKSLFVSPMDKREEASQARA 914
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQRGQE--AWFCSQYFVSSGVMNMLLGMRKQLQ 879
KF G SD L + A++ +++G FC + F+S+ + + +R++
Sbjct: 915 KFAT-----GNSDILTDLNAYDECARLREKGTSRVRAFCEENFISTSTIRDITSLRQEFL 969
Query: 880 TELIKNGFIPEDVSSCS-----HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF---- 930
+ LI IP + S H++R G++ AV++AGL+P VAR+ P K+ +F
Sbjct: 970 STLISLNLIPRGSTPSSPSLNTHSSRT-GLVKAVILAGLWPRVARVVLP-KDAIKFDRVQ 1027
Query: 931 ---VETAG---------------GAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
V+ A G +V LHP S+ F+ + K+ + T+
Sbjct: 1028 AGTVQRANEAREYKFFDIRVGDQGGRVFLHPSSVLFRSAEWKSPFVAFFQKQQTTK---- 1083
Query: 973 MHVRNCTVVGPLPLLLLATEIAV 995
+ +R+ T V +LL +AV
Sbjct: 1084 LWLRDATEVPIYAILLFGGPVAV 1106
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 137/232 (59%), Gaps = 25/232 (10%)
Query: 169 TSRIEKDANLRQ------IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVP 222
T R+E + LRQ I+ R +LP + ++ + + N+ +++ GETGCGKTTQ+P
Sbjct: 384 TVRLEFE-KLRQKKAYTDILVARKRLPAFAAQENFLNVLGKNRCMVVVGETGCGKTTQLP 442
Query: 223 QFLLEHIW--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH 280
QF+L+ + G I+ TQPRR+SA VA R+S ER E+ ++GY IR ESK
Sbjct: 443 QFVLDSLILAGHGSEVSIIVTQPRRLSALGVAARVSAERLED--GSVGYAIRGESKQSSR 500
Query: 281 SSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII 340
+ ++FCT GV LR L S D + +THIIVDE+HER D +L +
Sbjct: 501 TKLLFCTTGVALRRLGS--------------GDKLQNVTHIIVDEVHERSVDGDLLLLEL 546
Query: 341 RDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+ +L + L++ILMSAT++ + F +YF P++ + GFT+PVK YLED L
Sbjct: 547 KMLLQNNKKLKVILMSATINHEVFIKYFNDAPLLTISGFTHPVKDRYLEDYL 598
>gi|388855645|emb|CCF50633.1| uncharacterized protein [Ustilago hordei]
Length = 1548
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 160/504 (31%), Positives = 248/504 (49%), Gaps = 43/504 (8%)
Query: 550 QLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKK 609
Q LR S GAILVF PG +I D + + R SK I+ L++ + +Q++
Sbjct: 994 QELRGAADASVGGAILVFCPGVGEIRLAIDAI--STLLRGQSKVEILALYANLSPDEQRR 1051
Query: 610 VFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKAS 669
VF+ G RKI++STNIAET+ITI DV YV+D+GR+KE ++P + +++L W S+A+
Sbjct: 1052 VFEPVRAGYRKIVVSTNIAETSITIADVSYVVDTGRVKETRFEPESGLTSLVECWASRAA 1111
Query: 670 AKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED 728
KQR GRAGR +AG C+ LYS + + Q PE++R+P+E L LQVK + + +
Sbjct: 1112 CKQRGGRAGRVRAGECFRLYSSFVYETKMAAQQTPEMRRVPLESLFLQVKSMREEEEVRE 1171
Query: 729 FLQKTLDPPVSVTIRNAIIVLQDIGALSLDE----KVTELGEKLGCLSVHPLMSKMLFFA 784
+L K LDPP ++ A+ L + GAL D+ ++T LG L L +H ++K+L
Sbjct: 1172 YLNKALDPPSLASMDAALSNLIEAGALQGDKGYKSRLTSLGRHLAQLPLHLALAKLLIMG 1231
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+ CL P LT+A + F+ P E+ A F +A G +SD LA AAF+
Sbjct: 1232 SIFGCLGPMLTVASIMSCKPLFSAPFEKREELSKARASFAVA---GCRSDLLADAAAFQE 1288
Query: 845 WKN--AKQRGQEA---WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS--- 896
W+ A++R W +F+S + + R L + L + GF+ + S+
Sbjct: 1289 WQTMRAERRANHEVRDW-AESHFISQSTLRDMQTNRLDLLSHLQEMGFVADSYSAFGVYD 1347
Query: 897 -----HNARVPGIIHAVLMAGLYPMVARLRPP--------------HKNGRRFVETAGGA 937
NA+ G++ +V++AGL+P V R+ P R+
Sbjct: 1348 DQVYDRNAQHTGLLRSVILAGLWPSVVRIDQPCAKFDQGSSGTVQREAEARQVKYFDRNG 1407
Query: 938 KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRG---DGGMHVRNCTVVGPLPLLLLATEIA 994
+V LHP S F S K L + + G D +++R+ T V LLL ++
Sbjct: 1408 RVFLHPSSTLF--SCKGFQSSYLTTFSKSATGAASDSKVYLRDATEVPLFGLLLFGGKLK 1465
Query: 995 VAPAPDNEDDDEDDDMSDDDADEN 1018
+ + M DEN
Sbjct: 1466 INHFAGGIAIGSNQTMQKGSKDEN 1489
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 136/219 (62%), Gaps = 23/219 (10%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCTQ 242
R LP +S I + SN+VV+I+GETGCGKTTQVPQF+L+ G C IV TQ
Sbjct: 713 RQSLPAASAAKHILELIRSNRVVIIAGETGCGKTTQVPQFILDEAIQAGAGSECNIVVTQ 772
Query: 243 PRRISATSVAERISVERGENIGDN---------IGYKIRLESKGGKHSSIVFCTNGVLLR 293
PRR+SA VA R+++ERGE++ N +GY IR E + + ++F T GVLLR
Sbjct: 773 PRRVSAIGVASRVALERGEHLDGNKKPVASGSLVGYAIRGERRASRECRLLFTTTGVLLR 832
Query: 294 LLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
L + G D++ ++H++VDE+HER SDF+L +R++L ++++
Sbjct: 833 RLGAGG------------DTDLNGISHVVVDEVHERSVDSDFLLLELRELLKRNSKIKVV 880
Query: 354 LMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
LMSAT++ + F+ YFG P I +PG T+PV+ +YLED++
Sbjct: 881 LMSATINQETFASYFGEAPCISIPGRTFPVEDYYLEDII 919
>gi|409083523|gb|EKM83880.1| hypothetical protein AGABI1DRAFT_124205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1325
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 243/486 (50%), Gaps = 45/486 (9%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPF---FRDTSKFVIIPLHSM 601
LI + + ++DG +LVF PGW++I +LL PF F D+SKF I LHS
Sbjct: 685 LIAATISHVLESTDDGHVLVFCPGWDEIKAVEKQLLDPKQPFAFNFSDSSKFSIHLLHST 744
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P +Q+ +F+ PP G R++IL+TNIAET++TI DVV+V+D+ R+KE +DP ++S+L
Sbjct: 745 IPLAEQQVIFEPPPRGVRRVILATNIAETSVTIPDVVFVVDAARVKELRFDPERHMSSLV 804
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
S+WV ++ QRAGRAGR ++G + + + R A+L +Q+ E+KR + + + VK L+
Sbjct: 805 SAWVGSSNLNQRAGRAGRHRSGEYFGILGKTRLAALQPYQMVEMKRADLSNVVMHVKALN 864
Query: 722 -PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
P ++E+ L ++PP + A+ L +GA+ + +T LG L L V M ++
Sbjct: 865 FPGMSVEEVLAAAIEPPDPERVTAALKTLHMVGAIDTKQNLTSLGRVLLQLPVDAQMGRL 924
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ + CLD ALTLA R+PF +SP K AAK S +SD LA +
Sbjct: 925 VLYGSFFRCLDQALTLAAILTNREPF---VSPMHLKAEAAAKKNFWSPDEFRSDVLAALR 981
Query: 841 AFECWKNAKQRGQEA---WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP----EDVS 893
A+ W + GQ FC F+S + ++ ++ QL L G I D+
Sbjct: 982 AYNAWWALQSTGQYVSANRFCMDNFLSKPTLLLINKIKTQLLQSLYHAGVISVSAGGDLD 1041
Query: 894 SCSHNARVPGIIHA-----VLMAGLYPMVARLRPPHKNGRRFVETAGGA----------- 937
S + +VP ++ L+A L + ++ + + GR F + A
Sbjct: 1042 SSQTSLQVPPELNVNGESLPLLAALIAIASQPKYAVRTGRTFRTSREKACEQAAIPLFYL 1101
Query: 938 ----KVRLHPHSLNFKLSFKKTDDCP-----LMVYDEITR----GDGGMHVRNCTVVGPL 984
+HP S+N + DD L Y E+ R G ++ N T + P+
Sbjct: 1102 MFFQNTMIHPSSVNHRRRDTAEDDQSIIEKQLYAYSEMRRNLTGGGSQTYLVNTTKLDPM 1161
Query: 985 PLLLLA 990
+L
Sbjct: 1162 TYMLFG 1167
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 168/291 (57%), Gaps = 38/291 (13%)
Query: 117 LFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEK-- 174
LF H P AN + S+ R + ++ +P +A K +SL R+++
Sbjct: 359 LFRHRP-----------ANTAHSSE-VRISKPSLYRRPNADM--LAAKSKSLLERLQRYD 404
Query: 175 -DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL-EHIW-S 231
+ L+Q+ R LP+ + + S + SN V + TG GKTTQ+PQ LL EHI
Sbjct: 405 INPELQQMRAIRQNLPVFTCAQEVLSHIASNDVTICMAATGSGKTTQIPQMLLDEHIRRG 464
Query: 232 KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGV 290
+G TC I+CTQPRR++A SVA+R++ ERGE +GD++GY++R E++ K H SI FCT G+
Sbjct: 465 EGSTCNIICTQPRRLAAISVADRVAKERGEKLGDSVGYQVRFEAQPPKPHGSITFCTIGI 524
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH- 349
L+ R++ A + + +TH++VDE+HERD +D +L +++ ++
Sbjct: 525 FLK--------RMQSALDG-HDAGLDGVTHVVVDEVHERDVDTDLLLVVLKRLMAERKAR 575
Query: 350 ---LRLILMSATLDADRFSQYFG---GCP--VIQVPGFTYPVKSFYLEDVL 392
L+++LMSAT++ F YF G P V++VPG ++PV+ FY++D +
Sbjct: 576 GKPLKVVLMSATINPTLFQTYFSDHQGQPAKVVEVPGRSFPVQKFYMDDFV 626
>gi|154310252|ref|XP_001554458.1| hypothetical protein BC1G_07046 [Botryotinia fuckeliana B05.10]
Length = 1277
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/350 (38%), Positives = 194/350 (55%), Gaps = 14/350 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
+A + I+ L+ QL+ KI D AILVFLPG +I D L +P F +
Sbjct: 933 IAQFDEYRIEFDLVTQLIAKIAADDRFVPYSKAILVFLPGIAEIRTLNDMLCGHPAF--S 990
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
S + I PLHS + S Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 991 SDWYIYPLHSTIASEDQEAAFLVPPPGIRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1050
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIP 709
+D +S L +++SKA+AKQR GRAGR Q G+C+HL+++ R L D Q PE R+
Sbjct: 1051 FDERRQLSRLLETFISKANAKQRRGRAGRVQEGLCFHLFTKYRHDEILADQQTPEFLRLS 1110
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L + LDPP + IR AI L D+ AL+ E +T LG +L
Sbjct: 1111 LQDLAIRVKICKLG-GIEETLSEALDPPSAKNIRRAIDALVDVRALTAGEDLTPLGLQLA 1169
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD A+T+A + PF+ P +R A LA
Sbjct: 1170 RLPLDVFLGKLMLLGSVFKCLDAAVTIAAILSSKSPFSAPFG----QRQQADTVRLA-FR 1224
Query: 830 GGQSDQLAVIAAFECWKNA-KQRGQEAWFCSQYFVSSGVMNMLLGMRKQL 878
G SD L V A+ WK G E FC + F+S ++ + ++ QL
Sbjct: 1225 KGDSDLLTVYNAYLAWKKVCMANGSEYQFCRKNFLSQQSLSNIEDLKGQL 1274
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 153/231 (66%), Gaps = 20/231 (8%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ +++ R +LP+ SFKD + +D +QVV++ GETGCGK+TQVP F+LEH S+G+ CKI
Sbjct: 676 QHMLQSRMQLPMWSFKDEVLGAIDHSQVVIVCGETGCGKSTQVPAFILEHQLSRGKPCKI 735
Query: 239 VCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A R+S E GE D +GY IRLES K + +++ T G+++
Sbjct: 736 YCTEPRRISAISLARRVSEELGERKNDLGTSRSLVGYAIRLESNTSKETRLIYATTGIVM 795
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L E SN D+ +THI++DE+HER SDF+L ++R +L P L++
Sbjct: 796 RML---------EGSN-----DLRDITHIVLDEVHERTIDSDFLLIVLRKLLVRRPDLKV 841
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHL 403
+LMSAT+DADRFS+Y G PV+ VPG T+PV+ YLED + + + N L
Sbjct: 842 VLMSATVDADRFSKYLDGAPVLNVPGRTFPVQVKYLEDAVELTGFSLDNGL 892
>gi|331219058|ref|XP_003322206.1| ATP-dependent RNA helicase A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1575
Score = 226 bits (576), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 196/357 (54%), Gaps = 14/357 (3%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL-------LANPFFRDTSKFVI 595
+ LI ++ + S +G +LVFLPGWE+I + L L N F D+SKF +
Sbjct: 668 MPFALIALVVAWVLSKSSEGHVLVFLPGWEEIKGVQTILTDPRQFPLLNLNFNDSSKFEV 727
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
LHS +P Q+ VF PP G R++ILSTNIAET++TI DVV+V+D+G++KEK +DP
Sbjct: 728 HVLHSAIPVADQQLVFSPPPKGVRRVILSTNIAETSVTIPDVVFVVDTGKIKEKRFDPER 787
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
++S+L ++WV ++ QRAGRAGR ++G Y L S+ R +L E+KR + L +
Sbjct: 788 HLSSLITAWVGTSNLNQRAGRAGRHRSGDYYGLLSKRRYDALNIHSTVEMKRTDLSNLVM 847
Query: 716 QVKLLD-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
VK L+ PN ED L +T++PP + A+ LQ IGAL + +T LG L L V
Sbjct: 848 HVKALNFPNMEAEDVLAQTIEPPERERVSAAMSHLQSIGALDRHKDLTALGRVLLQLPVE 907
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ K+L CL+PAL LA RDPF P P K A K A L +SD
Sbjct: 908 AQIGKLLLLGSFFKCLEPALNLAAILTNRDPFLSP--PAAKAEADRVKSSWAPLE-FRSD 964
Query: 835 QLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
LA +AAF+ W N G + F ++ F+S + + ++ L L + G +
Sbjct: 965 PLASLAAFKAWSNLHAAGDNYKTNKFTNENFLSRPALFQIAQVKTHLLASLRRAGVL 1021
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 185/349 (53%), Gaps = 57/349 (16%)
Query: 134 ANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDA-------NLRQIVEERS 186
ANQ ++ +R + + + S A+K +S R DA + ++ E+R
Sbjct: 349 ANQGTANNPSRKNQTNNTSNSRQS----ALKEKSSALRDRLDAYQTNTSPEVVKLREQRQ 404
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPR 244
LP+++ V++S + SN + ++ TG GKTTQVPQ +L+ KGE C I+CTQPR
Sbjct: 405 SLPVTAHSSVVSSALASNPITILMAATGSGKTTQVPQLILDEATMKGEGAKCNIICTQPR 464
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGVSRL 303
RI+A SVA+R++ ER E + +++GY++R ESK SI+FCT G+ LR RL
Sbjct: 465 RIAAISVAQRVAAERNEKLSESVGYQVRFESKPPTPDGSILFCTTGIFLR--------RL 516
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML-----PSYPHLRLILMSAT 358
+ + + ++THI+VDE+HERD +D +L +R +L ++++LMSAT
Sbjct: 517 QNDMDSATGGFLDSITHIVVDEVHERDIETDLLLFCLRRVLKDRKEKGKSEIKVLLMSAT 576
Query: 359 LDADRFSQYF----GG--CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
+D F QYF GG PVI +PG ++PV+ YLE+V H D L +P
Sbjct: 577 VDPTLFEQYFSDGNGGKPAPVISIPGRSFPVEKHYLEEV----------HRDLRQLNLPT 626
Query: 413 E-------DPELTEENKSTLDEAISL-------AWSNDEFDMLLELVSL 447
DP++ + + L E ++L +D+ +M L++L
Sbjct: 627 ARGGWVWGDPKVQKYTQRELQEPLALDPVTGKSLRDSDDLEMPFALIAL 675
>gi|322701256|gb|EFY93006.1| ATP dependent RNA helicase, putative [Metarhizium acridum CQMa 102]
Length = 1457
Score = 226 bits (576), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 239/490 (48%), Gaps = 59/490 (12%)
Query: 543 IDLVLIEQLLRKICMDSEDG------AILVFLPGWEDINKTRDRLLANPFFRDTSKFVII 596
ID LI QL+ +C+ S++ AILVFLPG +I D LL +P F +++
Sbjct: 902 IDFDLILQLM--VCIASDESLAFYSKAILVFLPGIAEIRTLNDMLLGDPRF--AKDWLVY 957
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
PLHS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E +D
Sbjct: 958 PLHSSIATEDQESAFLVPPPGVRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDEKKQ 1017
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEELCL 715
+S L +++S+A+AKQR GRAGR Q G+C+H++++ R + D Q PE+ R+ +++L +
Sbjct: 1018 LSRLIDTFISRANAKQRRGRAGRVQNGLCFHMFTKYRHDCIMSDQQTPEMLRLSLQDLAI 1077
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
+VK+ IE+ L LD P + IR AI L D+ AL+ E++T LG +L L +
Sbjct: 1078 RVKICKIG-RIEETLSDALDAPSAKNIRRAIDALVDVRALTTAEELTPLGHQLARLPLDV 1136
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
+ K++ + CLD ++T+A + PF+ P ++ +A A+ + SD
Sbjct: 1137 FLGKLILLGTVFKCLDMSITVAAILSSKSPFSAPW--GQRTQADNARM---AFRRADSDL 1191
Query: 836 LAVIAAFECWKNAKQ----RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF---- 887
L + A+ WK Q G+E FC + F+S + + ++ QL L +GF
Sbjct: 1192 LTIYNAYLAWKRVCQVNSGGGKEFQFCRKNFLSQQTLANIEDLKGQLLVSLADSGFLSLT 1251
Query: 888 ------------------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPP 923
+P V+ S N + +V+ YP + P
Sbjct: 1252 EEERRTLARLRFAQGRRRQQNFYEVPRRVNINSENDLISS---SVIAWSFYPKLLVRDTP 1308
Query: 924 HKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGP 983
G R + + LHP S+N + D + Y I + H T V P
Sbjct: 1309 GTKGLRNI--GNNQNISLHPSSVN-----RGFLDIKWLSYYHIMQSKTVYHAHETTAVEP 1361
Query: 984 LPLLLLATEI 993
+ LL ++
Sbjct: 1362 FAIALLCGDV 1371
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 146/287 (50%), Gaps = 63/287 (21%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
+ +++ R +LP+ F+ + + VD NQVV++ GETG W
Sbjct: 669 FQSMLKFRMQLPMWQFRPQVLAAVDDNQVVIVCGETG---------------W------- 706
Query: 238 IVCTQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGVL 291
ISA S+A R+S E GEN GD +GY IRLE+ + + +VF T G++
Sbjct: 707 --------ISAISLARRVSDELGENKGDLGTNRSLVGYSIRLEANTSRETRLVFATTGIV 758
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
+R+L E SN D+ +TH+I+DE+HER SDF+L +++ +L L+
Sbjct: 759 MRML---------EGSN-----DLREVTHLILDEVHERSIDSDFLLIVLKRLLTKRKDLK 804
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL-----KSAESNHLDSA 406
++LMSAT+DA+RFS Y GG P++ VPG T+PV YLED + + S E +D
Sbjct: 805 VVLMSATVDAERFSAYLGGAPILNVPGRTFPVDVRYLEDAVELTGYRPSDSPEEKMVDLD 864
Query: 407 SLIVPNE--------DPELTEENKSTLDEAISLAWSNDEFDMLLELV 445
+V E P L+ + T L +FD++L+L+
Sbjct: 865 DDVVEGEGNGPKSEISPSLSAYSPQTRSTLTQLDEYRIDFDLILQLM 911
>gi|426201435|gb|EKV51358.1| hypothetical protein AGABI2DRAFT_182315 [Agaricus bisporus var.
bisporus H97]
Length = 1336
Score = 226 bits (576), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 243/486 (50%), Gaps = 45/486 (9%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPF---FRDTSKFVIIPLHSM 601
LI + + ++DG +LVF PGW++I +LL PF F D+SKF I LHS
Sbjct: 696 LIAATISHVLESTDDGHVLVFCPGWDEIKAVEKQLLDPKQPFAFNFSDSSKFSIHLLHST 755
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P +Q+ +F+ PP G R++IL+TNIAET++TI DVV+V+D+ R+KE +DP ++S+L
Sbjct: 756 IPLAEQQVIFEPPPRGVRRVILATNIAETSVTIPDVVFVVDAARVKELRFDPERHMSSLV 815
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
S+WV ++ QRAGRAGR ++G + + + R A+L +Q+ E+KR + + + VK L+
Sbjct: 816 SAWVGSSNLNQRAGRAGRHRSGEYFGILGKTRLAALQPYQMVEMKRADLSNVVMHVKALN 875
Query: 722 -PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
P ++E+ L ++PP + A+ L +GA+ + +T LG L L V M ++
Sbjct: 876 FPGMSVEEVLAAAIEPPDPERVTAALKTLHMVGAIDTKQNLTSLGRVLLQLPVDAQMGRL 935
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ + CLD ALTLA R+PF +SP K AAK S +SD LA +
Sbjct: 936 VLYGSFFRCLDQALTLAAILTNREPF---VSPMHLKAEAAAKKNFWSPDEFRSDVLAALR 992
Query: 841 AFECWKNAKQRGQEA---WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP----EDVS 893
A+ W + GQ FC F+S + ++ ++ QL L G I D+
Sbjct: 993 AYNAWWALQSTGQYVSANRFCMDNFLSKPTLLLINKIKTQLLQSLYHAGVISVSAGGDLD 1052
Query: 894 SCSHNARVPGIIHA-----VLMAGLYPMVARLRPPHKNGRRFVETAGGA----------- 937
S + +VP ++ L+A L + ++ + + GR F + A
Sbjct: 1053 SSQTSLQVPPELNVNGESLPLLAALIAIASQPKYAVRTGRTFRTSREKACEQAAIPLFYL 1112
Query: 938 ----KVRLHPHSLNFKLSFKKTDDCP-----LMVYDEITR----GDGGMHVRNCTVVGPL 984
+HP S+N + DD L Y E+ R G ++ N T + P+
Sbjct: 1113 MFFQNTMIHPSSVNHRRRDTVEDDQSIIEKQLYAYSEMRRNLTGGGSQTYLVNTTKLDPM 1172
Query: 985 PLLLLA 990
+L
Sbjct: 1173 TYMLFG 1178
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 168/291 (57%), Gaps = 38/291 (13%)
Query: 117 LFTHYPPDDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEK-- 174
LF H P AN + S+ R + ++ +P +A K +SL R+++
Sbjct: 370 LFRHRP-----------ANTAHSSE-VRISKPSLYRRPNADM--LAAKSKSLLERLQRYD 415
Query: 175 -DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL-EHIW-S 231
+ L+Q+ R LP+ + + S + SN V + TG GKTTQ+PQ LL EHI
Sbjct: 416 INPELQQMRAIRQNLPVFTCAQEVLSHIASNDVTICMAATGSGKTTQIPQMLLDEHIRRG 475
Query: 232 KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGV 290
+G TC I+CTQPRR++A SVA+R++ ERGE +GD++GY++R E++ K H SI FCT G+
Sbjct: 476 EGSTCNIICTQPRRLAAISVADRVAKERGEKLGDSVGYQVRFEAQPPKPHGSITFCTIGI 535
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH- 349
L+ R++ A + + +THI+VDE+HERD +D +L +++ ++
Sbjct: 536 FLK--------RMQSALDG-HDAGLDGVTHIVVDEVHERDVDTDLLLVVLKRLMAERKAR 586
Query: 350 ---LRLILMSATLDADRFSQYFG---GCP--VIQVPGFTYPVKSFYLEDVL 392
L+++LMSAT++ F YF G P V++VPG ++PV+ FY++D +
Sbjct: 587 GKPLKVVLMSATINPTLFQTYFSDHQGQPAKVVEVPGRSFPVQKFYMDDFV 637
>gi|400602350|gb|EJP69952.1| helicase associated domain-containing protein [Beauveria bassiana
ARSEF 2860]
Length = 1373
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 236/447 (52%), Gaps = 37/447 (8%)
Query: 522 LSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL 581
+ D + +++ K +N LI + ++ + ++ D + G IL+FLPG +I + L
Sbjct: 815 IGDELMGKIIQKLGHRINYNLI-VETVKAIDYELTYDKQPGGILIFLPGVGEIGQACRAL 873
Query: 582 LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
A + ++PLH+ + + +QK+VF P G RK++++TN+AET+ITIDD+V VI
Sbjct: 874 QA------ITSLHVLPLHASLETREQKRVFASAPHGKRKVVVATNVAETSITIDDIVAVI 927
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ 701
DSG++KE S+DP NN+ L+ +W S+A+ KQR GRAGR Q G CY LY+Q + +
Sbjct: 928 DSGKVKETSFDPGNNMRKLEETWASRAACKQRRGRAGRVQEGKCYKLYTQNLENQMAERP 987
Query: 702 VPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
PEI+R+P+E+LCL V+ + ++ FL ++ PP ++ I A+ +L+ +GAL DE +
Sbjct: 988 EPEIRRVPLEQLCLSVRAMGMR-DVARFLGRSPTPPEALAIEGAMKLLRRMGALDGDE-L 1045
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T +G++L L K++ F + CLD +T+A R PF ISP +K+ AA
Sbjct: 1046 TAMGQQLAMLPADLRCGKLMVFGAIFGCLDDCVTIAAILSTRSPF---ISPQDKR--DAA 1100
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQ----RGQEAWFCSQYFVSSGVMNMLLGMRKQ 877
K + G D L +AA+ WK + Q FC F+S ++ + + Q
Sbjct: 1101 KDARMRFFAGDGDLLTDLAAYTEWKGLMRDRLPMKQVRAFCDDNFLSHLTLSDISNTKSQ 1160
Query: 878 LQTELIKNGFIP---------------EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRP 922
T L + G + + S + ++ A++ + P +AR++
Sbjct: 1161 YYTALAEMGLVSPREAAAAEEDAVGAAAAGDAGSGRKKNSQLLRALVASAFTPQIARIQY 1220
Query: 923 PHKNGRRFVETAGGAKVRLHPHSLNFK 949
P K +F + GA V L P + + K
Sbjct: 1221 PDK---KFASSMSGA-VELDPEARSIK 1243
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 146/240 (60%), Gaps = 22/240 (9%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
E+ R E A ++++ +R KLP ++ I TV N V +ISGETG GK+TQ QF+
Sbjct: 574 EAWFKRQESSA-YKEMLGKRQKLPAWQMRERIVKTVMDNHVTIISGETGSGKSTQSVQFI 632
Query: 226 LEHIWSKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSI 283
L+ ++ KG + ++ TQPRRISA +A+R++ ER +G +GY IR E++ K + I
Sbjct: 633 LDDLYEKGLGDCANMLVTQPRRISALGLADRVAEERCGRVGQEVGYAIRGEARQSKDTRI 692
Query: 284 VFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSA----LTHIIVDEIHERDRYSDFMLAI 339
F T G+LLR L + G R+ DDV A ++H+IVDE+HER +DF+L +
Sbjct: 693 TFMTTGILLRRLQTSG-GRV---------DDVVASLADVSHVIVDEVHERSLDTDFLLNL 742
Query: 340 IRD-MLPSYPHLRLILMSATLDADRFSQYFG--GCPV--IQVPGFTYPVKSFYLEDVLSI 394
IR+ M L+LILMSATLDA F YF G V +++ G TYPV +++L+DV+ +
Sbjct: 743 IREVMRMKKDALKLILMSATLDAASFINYFASEGLKVGAVEIEGRTYPVDNYFLDDVIRM 802
>gi|403161903|ref|XP_003890419.1| hypothetical protein PGTG_20968 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171976|gb|EHS64505.1| hypothetical protein PGTG_20968 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1427
Score = 226 bits (575), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 195/355 (54%), Gaps = 14/355 (3%)
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL-------LANPFFRDTSKFVIIP 597
LI ++ + S +G +LVFLPGWE+I + L L N F D+SKF +
Sbjct: 670 FALIALVVAWVLSKSSEGHVLVFLPGWEEIKGVQTILTDPRQFPLLNLNFNDSSKFEVHV 729
Query: 598 LHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNV 657
LHS +P Q+ VF PP G R++ILSTNIAET++TI DVV+V+D+G++KEK +DP ++
Sbjct: 730 LHSAIPVADQQLVFSPPPKGVRRVILSTNIAETSVTIPDVVFVVDTGKIKEKRFDPERHL 789
Query: 658 STLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQV 717
S+L ++WV ++ QRAGRAGR ++G Y L S+ R +L E+KR + L + V
Sbjct: 790 SSLITAWVGTSNLNQRAGRAGRHRSGDYYGLLSKRRYDALNIHSTVEMKRTDLSNLVMHV 849
Query: 718 KLLD-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
K L+ PN ED L +T++PP + A+ LQ IGAL + +T LG L L V
Sbjct: 850 KALNFPNMEAEDVLAQTIEPPERERVSAAMSHLQSIGALDRHKDLTALGRVLLQLPVEAQ 909
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
+ K+L CL+PAL LA RDPF P P K A K A L +SD L
Sbjct: 910 IGKLLLLGSFFKCLEPALNLAAILTNRDPFLSP--PAAKAEADRVKSSWAPLE-FRSDPL 966
Query: 837 AVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
A +AAF+ W N G + F ++ F+S + + ++ L L + G +
Sbjct: 967 ASLAAFKAWSNLHAAGDNYKTNKFTNENFLSRPALFQIAQVKTHLLASLRRAGVL 1021
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 185/349 (53%), Gaps = 57/349 (16%)
Query: 134 ANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDA-------NLRQIVEERS 186
ANQ ++ +R + + + S A+K +S R DA + ++ E+R
Sbjct: 349 ANQGTANNPSRKNQTNNTSNSRQS----ALKEKSSALRDRLDAYQTNTSPEVVKLREQRQ 404
Query: 187 KLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPR 244
LP+++ V++S + SN + ++ TG GKTTQVPQ +L+ KGE C I+CTQPR
Sbjct: 405 SLPVTAHSSVVSSALASNPITILMAATGSGKTTQVPQLILDEATMKGEGAKCNIICTQPR 464
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQGVSRL 303
RI+A SVA+R++ ER E + +++GY++R ESK SI+FCT G+ LR RL
Sbjct: 465 RIAAISVAQRVAAERNEKLSESVGYQVRFESKPPTPDGSILFCTTGIFLR--------RL 516
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML-----PSYPHLRLILMSAT 358
+ + + ++THI+VDE+HERD +D +L +R +L ++++LMSAT
Sbjct: 517 QNDMDSATGGFLDSITHIVVDEVHERDIETDLLLFCLRRVLKDRKEKGKSEIKVLLMSAT 576
Query: 359 LDADRFSQYF----GG--CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
+D F QYF GG PVI +PG ++PV+ YLE+V H D L +P
Sbjct: 577 VDPTLFEQYFSDGNGGKPAPVISIPGRSFPVEKHYLEEV----------HRDLRQLNLPT 626
Query: 413 E-------DPELTEENKSTLDEAISL-------AWSNDEFDMLLELVSL 447
DP++ + + L E ++L +D+ +M L++L
Sbjct: 627 ARGGWVWGDPKVQKYTQRELQEPLALDPVTGKSLRDSDDLEMPFALIAL 675
>gi|240272887|gb|EER36412.1| DEAH box polypeptide 36 [Ajellomyces capsulatus H143]
Length = 842
Score = 226 bits (575), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 224/439 (51%), Gaps = 45/439 (10%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI LL I E AILVF+PG +I + D +L+ P F + S +VI L
Sbjct: 318 LDYKLIVSLLLAITTRKEFEQYSKAILVFMPGMAEIRRLNDEILSEPLF-NKSDWVIHAL 376
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 377 HSSIASEDQEKAFHVPPTGVRKIVIATNIAETGITIPDITAVIDTGKEKVMRFDEKRQLS 436
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L S++++A+AKQR GRAGR Q G+C+HL+++ R L + Q PEI R+ +++L L+V
Sbjct: 437 KLVESFIARANAKQRRGRAGRVQRGLCFHLFTKFRHDKLLAEQQTPEILRLSLQDLILRV 496
Query: 718 KLLDPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
K+ CN +E L + +DPP IR AI +++ A S E +T LG L L +
Sbjct: 497 KI----CNLGEVEQTLSEAIDPPSPKNIRRAIEAHKEVKAFSNTENLTPLGRLLAKLPLD 552
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ K++ + CLD A+++A + PF + N ++ F+ + G SD
Sbjct: 553 VFLGKLIIYGAFFKCLDSAVSIAAIVSSKSPFVNTVGSNTQRELAKLAFKRET---GSSD 609
Query: 835 QLAVIAAFECWKNAKQR--GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
L V A+ WK + E+ FC + ++SS + + ++ QL T ++ +G + D
Sbjct: 610 LLTVYNAYLSWKRHRSTPGMSESAFCRKNYLSSQTLQNIEDVKMQLLTSIVDSGLLNLDP 669
Query: 893 SSCSH--NARVPG--------------------IIHAVLMAGLYPMVARLRPPHKNGRRF 930
+ AR G I+++V+ YP + +NG+ +
Sbjct: 670 AEKDSLIRARFTGRQRQFFTVPKRMDINSENDIIVNSVIAWSFYPKLL-----SRNGKGW 724
Query: 931 VETAGGAKVRLHPHSLNFK 949
A V LHP S+N K
Sbjct: 725 RNVANNQTVSLHPTSVNKK 743
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 151/243 (62%), Gaps = 23/243 (9%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LPI FK I T+ SNQ ++I ETG GK+TQVP F+LE G CKI T+PR
Sbjct: 62 RKTLPIWQFKYQILDTLSSNQAIIICSETGSGKSTQVPSFILEKELLSGRDCKIYVTEPR 121
Query: 245 RISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E GE+ +G N +GY IRLESK + ++F T GV++R+L
Sbjct: 122 RISAMSLAKRLSDELGEDKNSVGTNRSLVGYAIRLESKISSSTRLIFATTGVVVRML--- 178
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
+P D +TH+++DE+HER SDF+L I+R ++ P L+L+LMSAT
Sbjct: 179 ---------ERPR--DFEDITHLVLDEVHERTIDSDFLLIILRRLMQERPDLKLVLMSAT 227
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELT 418
+DA RFS+Y G PV+ +PG T+PV+ YLED + I K +N SA + ++D EL
Sbjct: 228 VDAARFSKYLHGAPVLDIPGRTFPVEVKYLEDAIEITKYCPNNDGLSA---LTDDDDELP 284
Query: 419 EEN 421
+++
Sbjct: 285 DQS 287
>gi|452840248|gb|EME42186.1| hypothetical protein DOTSEDRAFT_175071 [Dothistroma septosporum
NZE10]
Length = 1444
Score = 225 bits (574), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 161/488 (32%), Positives = 244/488 (50%), Gaps = 52/488 (10%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA + ID LI +LL KI + A+LVFLPG +I + D L +P F+
Sbjct: 891 LANYDEYRIDYSLIVKLLEKIAFQPQYRDFSKAVLVFLPGIAEIRQLNDILAGHPKFQ-- 948
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ + PLHS S Q+ F PP G RKI+++TNIAET ITI DV VID G+ KE
Sbjct: 949 KGWRLHPLHSTFSSEDQQAAFDIPPQGTRKIVMATNIAETGITIPDVTCVIDIGKHKEMR 1008
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L S++++A+AKQR GRAGR Q GIC+HL+++ R L + Q PE+ R+
Sbjct: 1009 FDERRQMSRLIQSFIARANAKQRRGRAGRVQQGICFHLFTKYRHDQLMVEQQTPEMLRLS 1068
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L + LDPP S IR AI L ++GAL+ E++T LG +L
Sbjct: 1069 LQDLVMRVKICKLG-GIEEALAQALDPPSSRNIRRAIDALIEVGALTEREELTSLGTQLA 1127
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ CLD ALT+A + PF P+ + KK+A +
Sbjct: 1128 KLPLDAQLGKLILLGSNFGCLDFALTIAATLSSKSPFLSPM--HAKKQADTVRL---GFK 1182
Query: 830 GGQSDQLAVIAAFECWKN-AKQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
G SD L V A+ W+ +G W FC++ F+S + + ++ QL L GF
Sbjct: 1183 RGDSDLLTVYNAYSAWRKICTTQGMSEWQFCNRNFLSPQNLGNIEDLKAQLLGSLQDAGF 1242
Query: 888 I------PEDVSSCSHNAR------VP----------GIIHAVLMAGLYPMVARLRPPHK 925
+ +S HN R +P I ++V+ YP V + +
Sbjct: 1243 VRLGAEEKAALSRMRHNQRQRNFVALPAKHTASEDNDAIANSVVAWSFYPKVIK-----Q 1297
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP----LMVYDEITRGDGGMHVRNCTVV 981
+G+ + A + LHP S+N K + P L Y + + + + V
Sbjct: 1298 DGKGWRNIANNQSLCLHPTSVN------KNNLAPNIRYLSFYSIMQSSSRFTNAQETSPV 1351
Query: 982 GPLPLLLL 989
+PLLL+
Sbjct: 1352 SEIPLLLM 1359
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 163/271 (60%), Gaps = 22/271 (8%)
Query: 132 LDANQSRKSDKTRGKRVDIFC--KPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLP 189
+A+ R+ D G + C PK +EI +++++ N ++++ R LP
Sbjct: 592 FNASSRRRLDGASGTATPVSCIGTPKPGSSEILEELQAMWHYKTATPNYQRMLLARMNLP 651
Query: 190 ISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISAT 249
+ F+ T+ NQV ++ GETGCGK+TQ+P F+LEH S G CKI CT+PRRISA
Sbjct: 652 MFHFRAAALETIQRNQVTILCGETGCGKSTQLPAFILEHELSHGRPCKIYCTEPRRISAI 711
Query: 250 SVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRL 303
S+A+R+S E GE+ GD +GY IRLES ++ +V+ T G++LR+L
Sbjct: 712 SLAQRVSEEMGEHKGDVGSARSLVGYAIRLESHTSVNNRLVYATTGIVLRML-------- 763
Query: 304 KEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADR 363
D + +TH+++DE+HER +DF+L I++ ++ P LR++LMSAT+DA +
Sbjct: 764 ------ERADGLDEITHLVIDEVHERSIDTDFLLIILQSLMVKRPDLRVVLMSATVDAQK 817
Query: 364 FSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
FS+Y G P+I VPG T+PV++ YLED + +
Sbjct: 818 FSKYLNGAPIINVPGRTFPVEAKYLEDAIEL 848
>gi|71403779|ref|XP_804654.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70867741|gb|EAN82803.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 908
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 267/504 (52%), Gaps = 30/504 (5%)
Query: 515 KKHMENALSDSMKQQLLDKYLATV------NPE-LIDLVLIEQLLRKICMDSED--GAIL 565
KK + D + +K ATV +PE L+ LI +L+ I S D +IL
Sbjct: 170 KKSKNHNSEDGNDSSIFEKIKATVFGETDNDPEVLVPYDLIFKLISYIHASSHDLSESIL 229
Query: 566 VFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILST 625
VFLPGW I++ + +P R+ S ++ LHS + + +Q++VF RPP RKI+LST
Sbjct: 230 VFLPGWASISRVNTMIQRSPIARELS---VLQLHSSLTAAEQQRVFYRPPKRFRKIVLST 286
Query: 626 NIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIC 685
NIAE ++TIDD+VYVIDS K SYD N S L+++++SKA+ QR GRAGRC+AG+C
Sbjct: 287 NIAEASVTIDDIVYVIDSCLTKGTSYDARGNTSVLKATFISKANGMQRRGRAGRCRAGVC 346
Query: 686 YHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNA 745
HL + LP+F +PEI R +E++CLQVK L P+ L + +DPP + + +A
Sbjct: 347 VHLLPRSAYEKLPEFLLPEIMRSSLEDVCLQVKALKPDEVCAKVLSRAMDPPPADSTEHA 406
Query: 746 IIVLQDIGALSLD-EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRD 804
+ L+D+GA + + E++T LG L L +HPL+ KML A + L+P +T+A +
Sbjct: 407 VRFLKDMGAFTSEKEQMTNLGRALSKLPIHPLLGKMLLAAACLGVLEPVVTIAAYLSGKS 466
Query: 805 PFTLPISPNEKKRATAAKFELASLYGG-QSDQLAVIAAFECWKNAKQRGQEAWFCSQYFV 863
PF P+ P++K A + + S+ G SD L+V+ F+ WK + A + Q F
Sbjct: 467 PFIKPL-PHQK---NAMRNAVQSIDNGLLSDHLSVMKLFDEWKKS---NCSADYAMQNFA 519
Query: 864 SSGVMNMLLGMRKQLQTELIKNGFIPEDVSS----CSHNARVPGIIHAVLMAGLYPMVAR 919
V+ + +RKQL L+K+ + V S ++ G+I V + LYP +A
Sbjct: 520 DQTVLRSMDRIRKQL-LRLVKDSSLLRKVEDPMRMASRHSSNLGLIRLVALWSLYPRIAS 578
Query: 920 LRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDC---PLMVYDEITRGDGGMHVR 976
+ R+ E ++ ++ L+FK DD + Y E + + V
Sbjct: 579 VEYRANRNRKRPEIFCWDN-KVAQCAMGSALAFKNRDDFRDRAFVFYHERMYLEANLTVF 637
Query: 977 NCTVVGPLPLLLLATEIAVAPAPD 1000
+ + V P+ + L E A+ P D
Sbjct: 638 DASAVTPVEVALCLREFALRPLTD 661
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 90/162 (55%), Gaps = 28/162 (17%)
Query: 245 RISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLK 304
RISA SVA+R++ ERGE G + GY IR ++ + IV+ T G+LLR L
Sbjct: 1 RISALSVAQRVAEERGETCGTSCGYIIRFDNMTSPSTKIVYMTTGILLRRL--------- 51
Query: 305 EASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP--------HLRLILMS 356
P + VS IIVDE+HERD +DF L ++RD L H+++++MS
Sbjct: 52 --HTDPQLNGVSC---IIVDEVHERDVETDFCLLLLRDRLIEQQRNNQLYKNHVKVVVMS 106
Query: 357 ATLDADRFSQYF----GGC--PVIQVPGFTYPVKSFYLEDVL 392
AT+ ++ + YF GG P+I +PG +PV+ +LE+ L
Sbjct: 107 ATVQIEKVASYFVCVCGGKAPPIISIPGTLFPVEECFLEEAL 148
>gi|268532474|ref|XP_002631365.1| C. briggsae CBR-RHA-1 protein [Caenorhabditis briggsae]
Length = 1402
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 254/482 (52%), Gaps = 22/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N L+D + L ++ ++ + I +IE +L I DGA+L+FLPGW +I +
Sbjct: 721 NLLNDPSANENLKTAMSRISEKDIPYGVIEAILTDIASRGVDGAVLIFLPGWSEIMTLCN 780
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
RL + F +K+ ++PLHS + S +Q+KVF P G RKII+STNIAET+ITIDDVVY
Sbjct: 781 RLQEHEEFGQANKYEVLPLHSQLTSQEQRKVFNHYP-GKRKIIISTNIAETSITIDDVVY 839
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VIDS + KE+ Y NN+ + W S+ + QR GRAGR + G +HL SQ+R SL +
Sbjct: 840 VIDSCKAKERMYTSNNNMVHFATVWASRTNVIQRRGRAGRVRPGYAFHLCSQMRYNSLEE 899
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
E+ RIP+ ++ L +KLL ++ +FL K L+PP + + +LQ +GAL +
Sbjct: 900 HGTAEMLRIPLHQIALTIKLLRLG-SVGEFLGKALEPPPYDMVVESEAILQAMGALDRNL 958
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRAT 819
++T LG+ L + + P++ K+L + +A A + PF P EK +
Sbjct: 959 ELTSLGKMLARMPIEPVIGKVLILGTALGLGSVMCDVAAAMSFPTPFV----PREKHHSR 1014
Query: 820 AAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRK 876
+ + SD +++++ F+ ++ A + G A FC + +S+ V+ M G R+
Sbjct: 1015 LSGVQRRFAGTKFSDHVSLVSVFQSYREAAEMGAAAGEREFCERNSLSNPVLKMTEGARR 1074
Query: 877 QLQTELIKNGFIPEDV-----SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
QL L PED+ + R ++ ++L+ LYP VA + G+R V
Sbjct: 1075 QLIDVLRNQCSFPEDILYDHQVNVMAQDRELNLMRSLLVMALYPNVA-----YYTGKRNV 1129
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDD--CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
T +K ++ +S ++ ++ D PL+V+ E R + + +V+ + LL+
Sbjct: 1130 LTIEQSKALINKYSNLVPMANRQELDFPSPLIVFTEKVRTR-CISCKGISVITAIQLLVF 1188
Query: 990 AT 991
+
Sbjct: 1189 GS 1190
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 159/249 (63%), Gaps = 31/249 (12%)
Query: 163 MKVESLTSRIEKDANLRQ------IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
M +E ++ RI + +Q + ++R LP++ FKD I TV +N+V LI GETGCG
Sbjct: 453 MSMEQISQRITEKEEAKQTGSLDSVNDQRKGLPVAQFKDQIIQTVANNRVTLIKGETGCG 512
Query: 217 KTTQVPQFLLEHI--WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
K+TQV QFLLE +K V +QPRRISA S+AER++ ERGE++G+ GY +R +
Sbjct: 513 KSTQVAQFLLESFIETNKAAYFNAVVSQPRRISAISLAERVANERGEDVGETCGYNVRFD 572
Query: 275 SKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
S + + SI+FCT GVLLR++ ++ + ++H+I+DEIHERD +
Sbjct: 573 SATPRPYGSIMFCTVGVLLRMM----------------ENGLRGISHVIIDEIHERDVDT 616
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGC------PVIQVPGFTYPVKSFY 387
DF+L ++RDM+ +Y LR++LMSAT+D + F+ +FG PVI + G T+PV++F+
Sbjct: 617 DFVLIVLRDMINTYKDLRVVLMSATIDTNLFTNFFGSAPDIGPTPVITMHGRTFPVQAFF 676
Query: 388 LEDVLSILK 396
LED+L L+
Sbjct: 677 LEDILHNLR 685
>gi|336467753|gb|EGO55917.1| hypothetical protein NEUTE1DRAFT_124227 [Neurospora tetrasperma FGSC
2508]
gi|350287591|gb|EGZ68827.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 1495
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 242/497 (48%), Gaps = 56/497 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ ID LI QL+ I + AILVFLPG +I D LL + F D
Sbjct: 930 LAQMDEYQIDFDLIVQLITTIATHPDYVDFSKAILVFLPGIAEIRTLNDMLLGDKAFAD- 988
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 989 -HWLVYPLHSTIATEDQEAAFLVPPPGMRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1047
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R + + D Q PE+ R+
Sbjct: 1048 FDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTKHRHDNIMSDQQTPEMLRLS 1107
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-DEKVTELGEKL 768
+++L ++VK+ IE+ L + LDPP + IR AI L D+ AL+ E++T LG +L
Sbjct: 1108 LQDLAIRVKICKIG-GIEETLGEALDPPSAKNIRRAIDALVDVRALTASSEELTPLGIQL 1166
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L + + K++ + CLD A+T+A + PF P ++ F
Sbjct: 1167 ARLPLDVFLGKLILLGAIFKCLDMAITVAAILSSKSPFVAPFGQRQQANTVRMGFR---- 1222
Query: 829 YGGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L V A++ WK Q G E +C + F+S + + ++ QL +
Sbjct: 1223 -KGDSDLLTVYNAYQSWKRVCQSSTSGGAEFQYCRKNFLSPQTLANIEDLKGQLLVSVAD 1281
Query: 885 NGF---------------------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
+GF +P+ V+ S N I +V+ YP +
Sbjct: 1282 SGFLQLTTEERQVLNRLRFGGKRRYQAFYEVPQRVNINSDNEL---IAQSVIAWSFYPKL 1338
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH-VR 976
P G R V + LHP S+N K ++ + Y I + G ++
Sbjct: 1339 LVRDVPGSKGLRNV--GNNQNISLHPSSVN-----KGHNELRWLSYYNIMQTKGSVYNAH 1391
Query: 977 NCTVVGPLPLLLLATEI 993
T V P + LL ++
Sbjct: 1392 ETTAVDPFAVALLCGDV 1408
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 147/223 (65%), Gaps = 20/223 (8%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
+Q++ R +LP+ F+ + TV+ QVV+I GETGCGK+TQVP FLLE KG CK
Sbjct: 673 FQQMLASRMQLPMWQFRQQVVDTVEREQVVIICGETGCGKSTQVPSFLLEDQLMKGRNCK 732
Query: 238 IVCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVL 291
I CT+PRRISA S+A+R+S E GE GD +GY IRLE+ + + +V+ T G++
Sbjct: 733 IYCTEPRRISALSLAKRVSEEIGEGRGDLGTPRSLVGYSIRLEANTSRETRLVYATTGIV 792
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
+R+L E SN D++ +TH+++DE+HER SDF+L +++ +L L+
Sbjct: 793 MRML---------EGSN-----DLNEITHLVLDEVHERSIDSDFLLIVLKKLLARRKDLK 838
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++LMSAT+DA+RFS Y GG PV+ VPG T+PVK YLED + +
Sbjct: 839 VVLMSATVDAERFSNYLGGAPVLNVPGRTFPVKVAYLEDAVEL 881
>gi|212532665|ref|XP_002146489.1| ATP dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
gi|210071853|gb|EEA25942.1| ATP dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
Length = 1461
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 230/438 (52%), Gaps = 50/438 (11%)
Query: 543 IDLVLIEQLLRKIC----MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI +LL I + AILVFLPG +I + D + ++P F ++I L
Sbjct: 921 LDYRLITKLLTTIATRQDLTQYSKAILVFLPGLAEIRRLHDEISSDPTF--NQGWIIHTL 978
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 979 HSSIASEDQEKAFLVPPEGTRKIVIATNIAETGITIPDITAVIDAGKEKVMRFDEKRQLS 1038
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L S++S+A+AKQR GRAGR Q GIC+HL+++ R + LP+ Q PE+ R+ +++L L+V
Sbjct: 1039 RLVESFISRANAKQRRGRAGRVQKGICFHLFTKYRYDNKLPEQQTPEMLRLSLQDLVLRV 1098
Query: 718 KLLDPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
K+ CN +E+ L + LDPP S IR AI L+++ AL+ E +T LG++L L +
Sbjct: 1099 KI----CNLGEVENTLLEALDPPSSKNIRRAIESLKEVKALTSAEGLTALGKQLAKLPLD 1154
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ K++ + + CLD +++A + PF + N ++ A F+ G SD
Sbjct: 1155 VWLGKLIIYGAIFKCLDACVSIAAILSSKSPFVNTLGSNSQRDAARLSFK-----RGDSD 1209
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---P 889
L + A+ WK ++ E FC + F+S + + ++ QL ++ G + P
Sbjct: 1210 LLTIYNAYLAWKRIRETPGVNEYSFCRKNFLSPQTLVNIEDVKTQLLVSIVDAGVLKLEP 1269
Query: 890 EDVSSCSHNARVPG--------------------IIHAVLMAGLYPMVARLRPPHKNGRR 929
E+ ++ ARV G I+++V+ YP + + G+
Sbjct: 1270 EEQTAL-RRARVTGRNRQFFVIPERVNVNSTNDVIVNSVIAWSFYPKLV-----IREGKG 1323
Query: 930 FVETAGGAKVRLHPHSLN 947
+ A + LHP S+N
Sbjct: 1324 WRNVANNQNISLHPTSVN 1341
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 169/282 (59%), Gaps = 32/282 (11%)
Query: 157 SKAEIAMKVESLTSRIEKDA------------NLRQIVEERSKLPISSFKDVITSTVDSN 204
+K ++ K E T ++ D + + + E R LP+ ++K I T+ +
Sbjct: 621 TKQHLSGKAEPTTPKVNADGLRNLWEEKSTTPSFQHMAESRKNLPVWAYKQEILDTLADH 680
Query: 205 QVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGE--- 261
Q V+I ETG GK+TQ+P F++E+ + G CK+ T+PRRISA S+A R+S E GE
Sbjct: 681 QAVIICSETGSGKSTQIPSFIMENELANGRECKVFVTEPRRISAISLARRVSEELGERRQ 740
Query: 262 NIGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSAL 318
++G N +G+ IRLESK + + ++F T GV++R+L +P +++ +
Sbjct: 741 DLGTNRSLVGFAIRLESKISQSTRLIFATTGVVVRML------------ERP--NELQDV 786
Query: 319 THIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPG 378
+HI++DE+HER SDF+L ++R +L P L+++LMSAT+DA +F+ Y GG PV+ +PG
Sbjct: 787 SHIVLDEVHERSIDSDFLLIVLRRLLAQRPDLKVVLMSATVDAKKFADYLGGAPVLNIPG 846
Query: 379 FTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEE 420
T+PV+ YLED +++ K + +++I +E+ L++E
Sbjct: 847 RTFPVQVRYLEDAINMTKYRLDDSHPGSTIIDEDEEDNLSDE 888
>gi|85095331|ref|XP_960062.1| hypothetical protein NCU05802 [Neurospora crassa OR74A]
gi|28921521|gb|EAA30826.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1491
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 242/497 (48%), Gaps = 56/497 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ ID LI QL+ I + AILVFLPG +I D LL + F D
Sbjct: 926 LAQMDEYQIDFDLIVQLISTIATHPDYVDFSKAILVFLPGIAEIRTLNDMLLGDKAFAD- 984
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 985 -HWLVYPLHSTIATEDQEAAFLVPPPGLRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1043
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R + + D Q PE+ R+
Sbjct: 1044 FDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTKHRHDNIMSDQQTPEMLRLS 1103
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL-DEKVTELGEKL 768
+++L ++VK+ IE+ L + LDPP + IR AI L D+ AL+ E++T LG +L
Sbjct: 1104 LQDLAIRVKICKIG-GIEETLGEALDPPSAKNIRRAIDALVDVRALTASSEELTPLGIQL 1162
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L + + K++ + CLD A+T+A + PF P ++ F
Sbjct: 1163 ARLPLDVFLGKLILLGAIFKCLDMAITVAAILSSKSPFVAPFGQRQQANTVRMGFR---- 1218
Query: 829 YGGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L V A++ WK Q G E +C + F+S + + ++ QL +
Sbjct: 1219 -KGDSDLLTVYNAYQSWKRVCQSSTSGGAEFQYCRKNFLSPQTLANIEDLKGQLLVSVAD 1277
Query: 885 NGF---------------------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
+GF +P+ V+ S N I +V+ YP +
Sbjct: 1278 SGFLQLTTEERQVLNRLRFGGKRRYQAFYEVPQRVNINSDNEL---IAQSVIAWSFYPKL 1334
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMH-VR 976
P G R V + LHP S+N K ++ + Y I + G ++
Sbjct: 1335 LVRDVPGSKGLRNV--GNNQNISLHPSSVN-----KGHNELRWLSYYNIMQTKGSVYNAH 1387
Query: 977 NCTVVGPLPLLLLATEI 993
T V P + LL ++
Sbjct: 1388 ETTAVDPFAVALLCGDV 1404
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 180/310 (58%), Gaps = 36/310 (11%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
+Q++ R +LP+ F+ + TV QVV+I GETGCGK+TQVP FLLE KG CK
Sbjct: 669 FQQMLASRMQLPMWQFRQQVVDTVKREQVVIICGETGCGKSTQVPSFLLEDQLMKGRNCK 728
Query: 238 IVCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVL 291
I CT+PRRISA S+A+R+S E GE GD +GY IRLE+ + + +V+ T G++
Sbjct: 729 IYCTEPRRISALSLAKRVSEEIGEGRGDLGTPRSLVGYSIRLEANTSRETRLVYATTGIV 788
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
+R+L E SN D++ +TH+++DE+HER SDF+L +++ +L L+
Sbjct: 789 MRML---------EGSN-----DLNEITHLVLDEVHERSIDSDFLLIVLKKLLARRKDLK 834
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVP 411
++LMSAT+DA+RFS+Y GG PV+ VPG T+PVK YLED + + AS +
Sbjct: 835 VVLMSATVDAERFSKYLGGAPVLSVPGRTFPVKVAYLEDAVELTGYTLDQRNPVASKLTE 894
Query: 412 NEDPELTEENKSTLDEAI------------SLAWSND---EFDMLLELVS-LEGSPNVYN 455
+D E + S+ E I +LA ++ +FD++++L+S + P+ +
Sbjct: 895 LDDEADAEVDTSSKPELIQSLRNYSARTRNTLAQMDEYQIDFDLIVQLISTIATHPDYVD 954
Query: 456 YQHTLTGLTP 465
+ + P
Sbjct: 955 FSKAILVFLP 964
>gi|74025414|ref|XP_829273.1| RNA helicase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834659|gb|EAN80161.1| RNA helicase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 1299
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 260/501 (51%), Gaps = 48/501 (9%)
Query: 525 SMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE---DGAILVFLPGWEDINKTRDRL 581
S + LD L+ +NP++I+ LIE ++ + +D++ GAIL+FLPG ++ ++L
Sbjct: 651 SASHRTLD-ILSRMNPDVINYELIESIV--VYIDTKMGVPGAILIFLPGMVEMTSCMEQL 707
Query: 582 LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
+NP + S +I LHS + S +Q+ VF+ PP G RK+++ TNI ET+ITIDD V+VI
Sbjct: 708 KSNP--KLLSSCLIYNLHSSLGSAEQQGVFQHPPKGKRKVVIGTNIMETSITIDDAVFVI 765
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ 701
D G++KE YD ++S L + SKA+ +QR GRAGR + G C+ L++ + SL D Q
Sbjct: 766 DCGKVKENRYDARRSLSQLVTVNTSKANCRQRQGRAGRVREGFCFRLFTSTQFESLDDHQ 825
Query: 702 VPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
+ E+ R+P+E L LQ+ L+ +E +L+K L PP +R+++ L +GAL++D+++
Sbjct: 826 LCEMHRVPLESLVLQIYSLNLGDEVE-YLRKALSPPDERAVRSSVKALTTLGALTMDKRL 884
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T LG L L + + KM+ ++ C+DP LT+A R PF + + +
Sbjct: 885 TSLGRHLANLPLDVRIGKMVIHGAILQCVDPVLTIAACLAVRTPFLSAM--DYQVEVEGV 942
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQL 878
+ L+ Y SD L+ A+ W + A C++Y++S + + ++Q
Sbjct: 943 RRALSGDY--MSDHLSSWFAYSKWIAMWHKEGPAGASKLCAKYYLSLPALRQIQATKQQY 1000
Query: 879 QTELIKNGFIPEDVSSCSHNARV----------------------PGIIHAVL---MAGL 913
+ L + G I E +N + G + +L +AGL
Sbjct: 1001 ERFLYEAGLIEETPVRMKNNRFLYDPVVTLEDSVYESGGPRFNTNSGSVKCILSCIVAGL 1060
Query: 914 YPMVA---RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGD 970
YP VA +R R + T G++V +HP S+ K +K PL+VY + +
Sbjct: 1061 YPNVACVKTVRGGKGGNRTNITTLDGSEVLVHPSSVAGK---EKAFASPLLVYVDKVK-T 1116
Query: 971 GGMHVRNCTVVGPLPLLLLAT 991
+R ++V PL ++ +
Sbjct: 1117 SATFLREVSMVTPLHVVFFGS 1137
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 141/214 (65%), Gaps = 18/214 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCTQ 242
R +LP + ++ + V ++VV++SGETG GKTTQ+PQ+L E + KG + IVCTQ
Sbjct: 399 REQLPAYNAREELRQAVARHRVVVVSGETGSGKTTQIPQYLYEFMCEDGKGSSANIVCTQ 458
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL-VSQGVS 301
PRR++ATSVA R++ ER E +G +GY IRLE+ + I +CT GV+LR + V + +
Sbjct: 459 PRRLAATSVALRVAGERDEAVGGVVGYTIRLENCVSSRTQITYCTTGVVLRRIQVDKFLG 518
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
R+ +HI+VDEIHER +D +L ++RD+L L ++LMSAT+D+
Sbjct: 519 RV---------------SHIVVDEIHERGVDTDVLLILLRDLLERRDDLTVVLMSATMDS 563
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
+ F++YFGG P+I + G T+PV+ F+LE+++ ++
Sbjct: 564 ELFARYFGGSPIINIAGRTFPVQVFHLEEIIPMV 597
>gi|261335242|emb|CBH18236.1| RNA helicase, putative [Trypanosoma brucei gambiense DAL972]
Length = 1299
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 262/501 (52%), Gaps = 48/501 (9%)
Query: 525 SMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE---DGAILVFLPGWEDINKTRDRL 581
S + LD L+ +NP++I+ LIE ++ + +D++ GAIL+FLPG ++ ++L
Sbjct: 651 SASHRTLD-ILSRMNPDVINYELIESIV--VYIDTKMGVPGAILIFLPGMVEMTSCMEQL 707
Query: 582 LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
+NP + S +I LHS + S +Q+ VF+ PP G RK+++ TNI ET+ITIDD V+VI
Sbjct: 708 KSNP--KLLSSCLIYNLHSSLGSSEQQGVFQHPPKGKRKVVIGTNIMETSITIDDAVFVI 765
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQ 701
D G++KE YD ++S L + SKA+ +QR GRAGR + G C+ L++ + SL D Q
Sbjct: 766 DCGKVKENRYDARRSLSQLVTVNTSKANCRQRQGRAGRVRDGFCFRLFTSTQFESLDDHQ 825
Query: 702 VPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKV 761
+ E+ R+P+E L LQ+ L+ +E +L+K L PP +R+++ L +GAL++D+++
Sbjct: 826 LCEMHRVPLESLVLQIYSLNLGDEVE-YLRKALSPPDERAVRSSVKALTTLGALTMDKRL 884
Query: 762 TELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAA 821
T LG L L + + KM+ ++ C+DP LT+A R PF + + +
Sbjct: 885 TSLGRHLANLPLDVRIGKMVIHGAILQCVDPVLTIAACLAVRTPFLSAM--DYQVEVEGV 942
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRKQL 878
+ L+ Y SD L+ A+ W + A C++Y++S + + ++Q
Sbjct: 943 RRALSGDY--MSDHLSSWFAYSKWIAMWHKEGPAGASKLCAKYYLSLPALRQIQATKQQY 1000
Query: 879 QTELIKNGFIPEDVSSCSHNARV----------------------PGIIHAVL---MAGL 913
+ L + G I E +N + G + +L +AGL
Sbjct: 1001 ERFLYEAGLIEETPVRMKNNRFLYDPVVTLEDSVYESGGPRFNTNSGSVKCILSCIVAGL 1060
Query: 914 YPMVARLRPPH--KNGRRF-VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGD 970
YP VA +R K G R + T G++V +HP S+ K +K PL+VY + +
Sbjct: 1061 YPNVACVRTVRGGKGGNRTNITTLDGSEVLVHPSSVAGK---EKAFASPLLVYVDKVK-T 1116
Query: 971 GGMHVRNCTVVGPLPLLLLAT 991
+R ++V PL ++ +
Sbjct: 1117 SATFLREVSMVTPLHVVFFGS 1137
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 141/214 (65%), Gaps = 18/214 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCTQ 242
R +LP + ++ + V ++VV++SGETG GKTTQ+PQ+L E + KG + IVCTQ
Sbjct: 399 REQLPAYNAREELRQAVARHRVVVVSGETGSGKTTQIPQYLYEFMCEDGKGSSANIVCTQ 458
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL-VSQGVS 301
PRR++ATSVA R++ ER E +G +GY IRLE+ + I +CT GV+LR + V + +
Sbjct: 459 PRRLAATSVALRVAGERDEAVGGVVGYTIRLENCVSSRTQITYCTTGVVLRRIQVDKFLG 518
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
R+ +HI+VDEIHER +D +L ++RD+L L ++LMSAT+D+
Sbjct: 519 RV---------------SHIVVDEIHERGVDTDVLLILLRDLLERRDDLTVVLMSATMDS 563
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
+ F++YFGG P+I + G T+PV+ F+LE+++ ++
Sbjct: 564 ELFARYFGGSPIINIAGRTFPVQVFHLEEIIPMV 597
>gi|153792023|ref|NP_001093309.1| MLE protein [Bombyx mori]
gi|147883246|gb|ABQ51917.1| MLE protein [Bombyx mori]
Length = 1308
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 242/484 (50%), Gaps = 35/484 (7%)
Query: 521 ALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDR 580
+L D Q +D L ++ L++ +L I DGA+LVFLPGW I
Sbjct: 617 SLGDGYSQATVDA-LQQLSERDFSFELVQAILMYIDGLGGDGAVLVFLPGWNLIFALMKH 675
Query: 581 LLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYV 640
LL + F D SK+VI+PLHS +P QKKVF PP G K+ILSTNIAET+ITI+DVVYV
Sbjct: 676 LLQHRLFGDPSKYVILPLHSQIPREDQKKVFITPPEGITKVILSTNIAETSITINDVVYV 735
Query: 641 IDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDF 700
IDS + K K + +NN+++ + W SK + +QR GRAGR + G+C+ L + R L +
Sbjct: 736 IDSCKAKMKLFTSHNNMTSYATVWASKTNLEQRKGRAGRVRPGVCFTLCTYARYEKLEEH 795
Query: 701 QVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEK 760
E+ R P+ EL L +KLL I FL K +PP + A +L+++G L ++
Sbjct: 796 LAAEMFRTPLHELALSIKLLRLGA-IGHFLSKAPEPPPLDAVIEAEALLRELGCLDAEDA 854
Query: 761 VTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC-ASDYRDPFTLPISPNEKKRAT 819
+T LG L L + P + KM+ ++ D T+A ++ + + F L ++R +
Sbjct: 855 LTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTTMAANSTTFPEIFVL----EGRRRLS 910
Query: 820 AAKFELASLYGGQ--SDQLAVIAAFECWKNAKQRGQEA---WFCSQYFVSSGVMNMLLGM 874
+ L GG SD +A++ AF+ W+ +G+EA W C V + +
Sbjct: 911 MHQRAL----GGDRASDHVAMLNAFQMWEREHNKGEEAELRW-CEWKGVQQTTLRVTYEA 965
Query: 875 RKQLQTELIKN-GFIPEDVSSCSHNARVPG-------IIHAVLMAGLYPMVARLRPPHKN 926
+ QL L GF E C +P ++ A++ GLYP V
Sbjct: 966 KHQLINILTTAIGFNEE---CCVPQRWMPNGPDPTLDLVIALMCMGLYPNVCL-----HQ 1017
Query: 927 GRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPL 986
G+R V T G +H S+N + ++ PL V+ E R + + T+V P+ L
Sbjct: 1018 GKRKVLTTEGKPALIHKTSVNCS-NMEQKFPSPLFVFGEKVRTR-AISCKQTTMVAPIHL 1075
Query: 987 LLLA 990
LL
Sbjct: 1076 LLFG 1079
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 156/256 (60%), Gaps = 20/256 (7%)
Query: 145 GKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQ-IVEERSKLPISSFKDVITSTVDS 203
G +D S EI+ +E I +++ L Q + ER LP+ S K I ++
Sbjct: 336 GCNIDEGALATASMDEISADLEKCHRNICQNSKLYQESLNEREHLPVFSMKSQIMEAINE 395
Query: 204 NQVVLISGETGCGKTTQVPQFLLEHIWSKGETC--KIVCTQPRRISATSVAERISVERGE 261
N V++I G TGCGKTTQV QF+L+ + G+ + TQPRRISA SVAER++ ER E
Sbjct: 396 NPVIIIRGNTGCGKTTQVCQFILDDYIASGQGAWANVCVTQPRRISAVSVAERVAAERCE 455
Query: 262 NIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTH 320
+G+ +GY +R ES + + SI+FCT GVLLR L + + ++H
Sbjct: 456 ELGNTVGYSVRFESVLPRPYGSIMFCTVGVLLRKL----------------EGGLRGVSH 499
Query: 321 IIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFT 380
++VDE+HERD +DF L ++RDM +YP LR+ILMSAT+D F +YFGGCPVI+VPG T
Sbjct: 500 VLVDEVHERDADTDFALILLRDMAHTYPDLRIILMSATVDTTLFVKYFGGCPVIEVPGRT 559
Query: 381 YPVKSFYLEDVLSILK 396
YPV ++LED + + K
Sbjct: 560 YPVTQYFLEDSIELTK 575
>gi|171692321|ref|XP_001911085.1| hypothetical protein [Podospora anserina S mat+]
gi|170946109|emb|CAP72910.1| unnamed protein product [Podospora anserina S mat+]
Length = 1175
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 218/397 (54%), Gaps = 28/397 (7%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
G IL+FLPG +IN+ A R S ++ LH+ + + +QKKVF PPPG RKI
Sbjct: 666 GGILIFLPGVAEINR------ACNVLRSVSSLHVLQLHASLETKEQKKVFLSPPPGKRKI 719
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
+++TN+AET+ITIDD+V VIDSGR+KE S+DP NN+ L+ +W S+A+ KQR GRAGR Q
Sbjct: 720 VVATNVAETSITIDDIVAVIDSGRVKETSFDPQNNMRKLEETWASRAACKQRRGRAGRVQ 779
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVT 741
G CY LY++ + + PEI+R+P+E+LCL V+ + ++ FL + PP
Sbjct: 780 EGNCYKLYTRNLEQQMAERPEPEIRRVPLEQLCLAVRAMGIR-DVSHFLSRAPTPPEVTA 838
Query: 742 IRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASD 801
+ AI +L+ +GAL DE +T LG++L + K++ + + CLD +++A
Sbjct: 839 VEAAINMLRRMGALDGDE-LTALGQQLSLIPADLRCGKLMVYGSIFGCLDDCVSIAAILS 897
Query: 802 YRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW------KNAKQRGQEA 855
+ PF P P++++ A AK A G D L + A++ + + + R ++
Sbjct: 898 TKSPFLSP--PDKREEAKQAKMRFAR---GDGDLLTDLRAYQEFDAMMSDRVPQHRIRQ- 951
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG---IIHAVLMAG 912
FCS+ F+S M+ + R Q + L + G IP + + + ++ A+ +
Sbjct: 952 -FCSENFLSYPTMSDISSTRTQFYSSLTEMGIIPRWYNPQASQQQQQQSMVLLRALTASA 1010
Query: 913 LYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
P + R++ P K +F + GA V L P + K
Sbjct: 1011 FSPQICRIQFPDK---KFAASMAGA-VELDPEAKTIK 1043
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 139/226 (61%), Gaps = 14/226 (6%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--E 234
N +++ +R +LP + + TV NQV +ISGETG GK+TQ QF+L+ ++ +G
Sbjct: 383 NYKKMAAQRERLPAWQVRQRVVQTVQQNQVTIISGETGSGKSTQSVQFVLDDLYDRGLGG 442
Query: 235 TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
+ I+ TQPRRISA +A+R++ ER +G +G+ IR E K + I F T GVLLR
Sbjct: 443 SANIIVTQPRRISALGLADRVAEERCTQVGQEVGFSIRGEHKTSPSTKITFVTTGVLLRR 502
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L + G R+++ A DVS HI++DE+HER +DF+L+I+RD+L L+LIL
Sbjct: 503 LQTSG-GRVEDVVASLA--DVS---HIVIDEVHERSLDTDFLLSIVRDVLYKRRDLKLIL 556
Query: 355 MSATLDADRFSQYFG------GCPVIQVPGFTYPVKSFYLEDVLSI 394
MSATLDA F YF ++++ G TYPV FYL+D++ I
Sbjct: 557 MSATLDASSFRDYFMVDKQNVTVGLVEIAGRTYPVNDFYLDDIIRI 602
>gi|119611543|gb|EAW91137.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9, isoform CRA_a [Homo
sapiens]
Length = 1014
Score = 225 bits (573), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 198/359 (55%), Gaps = 12/359 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 637 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 695
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 696 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 755
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 756 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 815
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 816 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 874
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 875 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 927
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 928 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PED 985
Score = 212 bits (540), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 144/220 (65%), Gaps = 19/220 (8%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGET 235
L QI++ER LP+ F+ I + N VV+I G TGCGKTTQVPQF+L+ +
Sbjct: 391 LMQILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAE 450
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRL 294
C IV TQPRRISA SVAER++ ERGE G + GY +R ES + H+SI+FCT GVLLR
Sbjct: 451 CNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 510
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L + + ++H+IVDEIHERD +DF+L ++RD++ +YP +R++L
Sbjct: 511 L----------------EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVL 554
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
MSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 555 MSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 594
>gi|409051570|gb|EKM61046.1| hypothetical protein PHACADRAFT_247373 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1355
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 224/435 (51%), Gaps = 28/435 (6%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANP------FFRDTSKFVIIPLHS 600
LI + + S+DG +LVFLPGW+DI + R L NP ++S+F I LHS
Sbjct: 714 LIALTITHVLQKSDDGHVLVFLPGWDDIIGVQ-RALQNPRGGRLGLNFNSSQFRIHCLHS 772
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
VP +Q+ +F PPPG R+IIL+TNIAET++TI DVVYV+DS ++KE+ YDP ++S+L
Sbjct: 773 TVPIQEQQLIFDPPPPGQRRIILATNIAETSVTIPDVVYVVDSAKIKEQRYDPERHISSL 832
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
S+WV ++ QRAGRAGR + G Y + + RA +L Q E+KR+ + + + VK L
Sbjct: 833 VSAWVGSSNLNQRAGRAGRHRPGEYYGILGRRRADNLHPHQTVEMKRVDLSNVVMHVKAL 892
Query: 721 D-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
+ P +E+ L T++PP + + A+ LQ +GAL ++ +T LG L L + M +
Sbjct: 893 NFPGMAVEEVLAATIEPPPAERVAAAMNSLQMVGALDDNKNLTSLGRVLLQLPIDAQMGR 952
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
++ F CLD ALTLA RDPF P+ ++ A F +SD LA +
Sbjct: 953 LVLFGSFFRCLDQALTLAAILTNRDPFVSPMHLKDEASARKISFSPEEF---RSDALATL 1009
Query: 840 AAFECWKNAKQRGQ---EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS 896
A+ W R + FC + F+S + M+ ++ + L G I S +
Sbjct: 1010 RAYNQWWEIYSREEYNAATRFCLENFLSKPTLVMIQKIKSHILQSLYDIGVIEVSASGTA 1069
Query: 897 --HNARVPGIIHAV------------LMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLH 942
R G + V L+A L + + + ++ + T+ V +H
Sbjct: 1070 AVRPTRSRGSVLTVPAELNKNGSSLPLLAALISIAVQPKFAVRSSDKTYRTSQDKVVFIH 1129
Query: 943 PHSLNFKLSFKKTDD 957
P S+N + +K D
Sbjct: 1130 PSSVNHRKRLEKDGD 1144
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 160/268 (59%), Gaps = 27/268 (10%)
Query: 151 FCKPKMSKAE---IAMKVESLTSRIEK---DANLRQIVEERSKLPISSFKDVITSTVDSN 204
+ P +A+ +A+K + L R ++ + + ++ + R+ LP+ + D + S + +
Sbjct: 401 YVAPYRRRADEEALALKSKVLQERRKQYLENPAMEKMRKTRAALPVYTKADDLLSHIREH 460
Query: 205 QVVLISGETGCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGEN 262
V + TG GKTTQ+PQ +L+ GE C IVCTQPRRI+A SVA+R++ ERGE
Sbjct: 461 DVTICMAATGSGKTTQIPQLILDDWIDGGEGAKCNIVCTQPRRIAAISVAQRVAAERGEI 520
Query: 263 IGD-NIGYKIRLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTH 320
G +IGY++R E++ + H S+ FCT G+ L+ + S L+E + + DDV TH
Sbjct: 521 AGKGSIGYQVRFEAQLPEDHGSVTFCTTGIFLKRMQSA----LEEGARGRSLDDV---TH 573
Query: 321 IIVDEIHERDRYSDFMLAIIR----DMLPSYPHLRLILMSATLDADRFSQYF---GGCP- 372
I+VDE+HERD +D +L +++ D ++++LMSAT+D F +YF G P
Sbjct: 574 IVVDEVHERDVDTDLLLVVLKRLLADRKAKGKPIKVVLMSATIDPRLFREYFPDEQGDPA 633
Query: 373 -VIQVPGFTYPVKSFYLED-VLSILKSA 398
VI +PG ++PV+ +L++ +L +L+SA
Sbjct: 634 SVIDIPGRSFPVQKHFLDEYLLQLLESA 661
>gi|157382888|gb|ABV48879.1| maleless [Drosophila simulans]
Length = 1298
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 250/482 (51%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN++ + W SK + +QR GRAGR + G C+ L + R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTNYATVWASKTNLEQRKGRAGRVRPGFCFTLCLRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLGA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGSKCSDHVAMIVASQMWRREKQRGEHMEARFCEWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + + + R G + A+L GL+P + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMITHDVDERNNGDDPVLDVSLALLCLGLFPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 223 bits (567), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYEHSLRDRRQNDTEYRQFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D FS+YFGGCPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMIDTYPELHVILMSATIDTTLFSKYFGGCPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>gi|302695215|ref|XP_003037286.1| hypothetical protein SCHCODRAFT_255495 [Schizophyllum commune H4-8]
gi|300110983|gb|EFJ02384.1| hypothetical protein SCHCODRAFT_255495, partial [Schizophyllum
commune H4-8]
Length = 1393
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 248/476 (52%), Gaps = 36/476 (7%)
Query: 548 IEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPF-------FRDTSKFVIIPLHS 600
I+ +L K S+DG +LVFLPGW++I ++ R+L NP F ++SK+ I LHS
Sbjct: 788 IQHVLEK----SDDGHVLVFLPGWDEI-QSVTRMLTNPRNGSWRLPFGNSSKYTIHALHS 842
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
VP +Q+ +F+ PP G R+IILSTNIAET++TI DVVYV+DSGR +E YDP ++S L
Sbjct: 843 SVPLAEQQVIFEPPPEGVRRIILSTNIAETSVTIPDVVYVVDSGRHRENRYDPDRHMSRL 902
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
++WV ++ QRAGRAGR + G Y + S+ + L Q E+KR+ + + + +K L
Sbjct: 903 VNAWVGLSNLNQRAGRAGRHRPGEYYGILSEAHKSRLATHQTVEMKRVDLSNVVMHIKAL 962
Query: 721 D-PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
P+ E+ L++T++PP + + A+ L+ +GAL + +T LG L + + +
Sbjct: 963 HFPDMTTEEVLERTIEPPPADRVAAAMDDLRLVGALDEKKDLTALGRVLLQIPCDVQIGR 1022
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
+L + CLD ALTLA RDPF P+ E+ R + +SD LA +
Sbjct: 1023 LLLYGSFFRCLDQALTLAAIMSNRDPFVAPMHLKEEARQAKDSWADREF---RSDVLAAL 1079
Query: 840 AAFECWKNAKQRGQEA---WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS--- 893
A+ W + ++ G+ FC F+S + + + L + + G + DVS
Sbjct: 1080 KAYNAWWDIQKNGEYVRANRFCVDNFLSKPTLVQMQKEKTHLYDSMRRAGVL--DVSAGG 1137
Query: 894 --SCSHNARVPGIIHAV-----LMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSL 946
S + + VP ++ L+ L + + + + + TA V +HP S+
Sbjct: 1138 SASFTRHGDVPSELNVNGGSMPLLTALITLACQPKYALRIKDKIYRTAMEKNVLMHPSSV 1197
Query: 947 N--FKLSFKKTDDCPLMVYDEITRGDGG--MHVRNCTVVGPLPLLLL-ATEIAVAP 997
N +L+ +T + L + E G GG M + N T + L +L A++ + P
Sbjct: 1198 NDRKRLTDHETHERMLYAFIEKRMGTGGNQMSIVNTTRIDLLTYILFGASKTELTP 1253
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 147/249 (59%), Gaps = 21/249 (8%)
Query: 157 SKAEIAMKVESLTSRIE---KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGET 213
S A I K + L+ R + ++ L ++ + R+ LP+ + + + ++ N V + T
Sbjct: 483 SDATIQSKSKLLSERRQAYLENPKLDKMRKTRAALPVYTKAEDLIKHIEENDVTICMAAT 542
Query: 214 GCGKTTQVPQFLLEHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKI 271
G GKTTQ+PQ +L+H KGE C I+CTQPRR++A SVA+R++ ERGE +G ++GY +
Sbjct: 543 GSGKTTQIPQLILDHHIDKGEGARCNIICTQPRRLAAISVADRVAKERGETVGQSVGYTV 602
Query: 272 RLESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
R ES+ + + SI FCT GV L+ L S V N + + + +IIVDE+HERD
Sbjct: 603 RFESRAPEPNGSITFCTIGVFLKKLQSGLV------GNSAGSEWLDTVQYIIVDEVHERD 656
Query: 331 RYSDFMLAIIRDMLPSYPH----LRLILMSATLDADRFSQYF---GGCP--VIQVPGFTY 381
+D ML +++ +L +++ILMSAT+D F Y G P VI++PG ++
Sbjct: 657 VDTDLMLVVLKRILADRRARGKPMKVILMSATIDPTLFQTYLPDQTGQPAKVIEIPGRSF 716
Query: 382 PVKSFYLED 390
PV+ ++++
Sbjct: 717 PVQQTFIDE 725
>gi|358387439|gb|EHK25034.1| hypothetical protein TRIVIDRAFT_178589 [Trichoderma virens Gv29-8]
Length = 1465
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 225/452 (49%), Gaps = 52/452 (11%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA +N IDL LI +L+ ++ D A+LVFLPG DI D LL +P F +
Sbjct: 905 LAQMNEYQIDLDLIVELIARVSTDESLQQYSNAVLVFLPGIADIRSLNDMLLGDPRF--S 962
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +++ PLHS + Q+ F PP G RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 963 AGWLVYPLHSTIAMEDQEAAFLVPPQGMRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1022
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++S+ R +L D Q PE+ R+
Sbjct: 1023 FDEKKQLSRLIDTFISRANAKQRRGRAGRVQNGLCFHMFSRYRHDTLMSDQQTPEMLRLS 1082
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L LDPP + IR A+ L D+ AL+ E +T LG +L
Sbjct: 1083 LQDLAIRVKICKIG-GIEETLGDALDPPSAKNIRRAVDALVDVRALTGTEDLTPLGYQLA 1141
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD A+T+A + PF+ P + A F A
Sbjct: 1142 RLPLDVFLGKLILLGSVFKCLDMAITVAAILSSKSPFSAPFGQQAQANNARAAFRRAD-- 1199
Query: 830 GGQSDQLAVIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKN 885
SD L A+ WK Q G+E FC + +++ + + ++ QL T L +
Sbjct: 1200 ---SDVLTTYNAYLAWKRVCQANGNLGKEFQFCRKNYLNQQTLTNIEDLKGQLLTSLADS 1256
Query: 886 GF------------------------------IPEDVSSCSHNARVPGIIHAVLMAGLYP 915
GF +P+ V+ S N V +V+ YP
Sbjct: 1257 GFLSLTEEERRALLKLRFSSGGRGRRQQQFVEVPQRVNLNSDNDVVS---TSVIAWSFYP 1313
Query: 916 MVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+ P G R + + LHP S+N
Sbjct: 1314 KLLVRDAPGSKGLRNI--GNNQSISLHPSSVN 1343
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 164/258 (63%), Gaps = 21/258 (8%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
++E R +LP+ FK+ + VD+NQV++I GETGCGK+TQVP FLLEH S+G CKI C
Sbjct: 653 MLEYRVQLPMWKFKNHVLDAVDNNQVIIICGETGCGKSTQVPAFLLEHELSQGRPCKIYC 712
Query: 241 TQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLLRL 294
T+PRRISA S+A R+S E G+ GD +GY IRLES K + +V+ T G+++R+
Sbjct: 713 TEPRRISAISLARRVSEELGDERGDLGTSRSLVGYSIRLESNTSKETRLVYATTGIVMRM 772
Query: 295 LVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLIL 354
L E SN D+ +TH+++DE+HER SDF+L +++ +L L++IL
Sbjct: 773 L---------EGSN-----DLGEVTHLVLDEVHERSIDSDFLLIVLKRLLKRRKDLKVIL 818
Query: 355 MSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNED 414
MSAT+DA+RFS Y GG PV+ VPG T+PV YLED + + A +N +S L+ ++D
Sbjct: 819 MSATVDAERFSAYLGGAPVLNVPGRTFPVMVRYLEDAVELTGYAPNNS-ESDRLVDLDDD 877
Query: 415 PELTEENKSTLDEAISLA 432
TE + A SLA
Sbjct: 878 AVETEVEGLKSEMAQSLA 895
>gi|453084508|gb|EMF12552.1| ATP-dependent RNA helicase A [Mycosphaerella populorum SO2202]
Length = 1471
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 264/530 (49%), Gaps = 52/530 (9%)
Query: 498 ALQLGEQENQPEVAQIIKK-HMENALSDSMKQQLLDKY-------LATVNPELIDLVLIE 549
A++L N+ A + + +++ +++QQ L+ Y LA+ + ID L+
Sbjct: 874 AIELTGHTNEDASANAVDEDEQDDSEQKTVEQQKLEGYSKKARQTLASYDEYRIDYSLMV 933
Query: 550 QLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSV 605
+L+ KI + AILVFLPG +I + D L +P F + I PLHS S
Sbjct: 934 KLIDKIAYLDQYQPFSKAILVFLPGLAEIRQLNDMLSGHPKF--LKGWQIFPLHSTFSSE 991
Query: 606 QQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 665
Q+ F+ PPPG RKI+L+TNIAET ITI DV VID+G+ KE +D +S L +++
Sbjct: 992 DQQAAFEVPPPGVRKIVLATNIAETGITIPDVTCVIDTGKHKEMRFDERRQMSRLIQTFI 1051
Query: 666 SKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNC 724
++A+AKQR GRAGR Q G+C+HL+++ R + D Q PE+ R+ +++L ++VK+
Sbjct: 1052 ARANAKQRRGRAGRVQEGLCFHLFTKHRFEHMMVDQQTPEMLRLSLQDLVMRVKICKLG- 1110
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
+IE L + LDPP +R AI L ++GAL+ E++T LG +L L + + K++
Sbjct: 1111 SIEHALAQALDPPSGKNVRRAIDALIEVGALTSGEELTSLGTQLAKLPLDAQLGKLVLLG 1170
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
CLD ALT A + + PF P+ + F+ G SD L V A+
Sbjct: 1171 SAFGCLDFALTAAASLSSKSPFLSPMHARNQADTVRLGFKR-----GDSDLLTVYNAYST 1225
Query: 845 WKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PED---VSSCS 896
W+ E FC++ F+S + + ++ QL L G + PED ++
Sbjct: 1226 WRKVCTTAGIPEYQFCNKNFLSPQNLAGIEDLKAQLLGSLADAGVVHLGPEDKQALARLR 1285
Query: 897 HNAR------VP----------GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR 940
HN R +P ++ +V+ YP + + ++G+ + A +
Sbjct: 1286 HNPRKRNFVTLPNLYTRADDNDAVVASVVAWSFYPKIVK-----QDGKGWRNIANNQSLG 1340
Query: 941 LHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
L+P S+N K S + + L Y + + T V +PL+L+A
Sbjct: 1341 LNPKSVN-KNSLQPNVNY-LSFYSIMQSSSRFTNANETTAVSEIPLILMA 1388
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 159/251 (63%), Gaps = 24/251 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+Q++ R LP+ F+ + +QV ++ GETGCGK+TQ+P F+LE+ S G CKI
Sbjct: 670 QQMLRFRMNLPMFRFRQAALDAIQRHQVTILCGETGCGKSTQLPAFILENELSNGRPCKI 729
Query: 239 VCTQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A+R+S E GE+ GD +GY IRLES+ ++ +V+ T G++L
Sbjct: 730 YCTEPRRISAISLAQRVSEEMGESKGDVGTPRSLVGYAIRLESQTNANTRLVYATVGIVL 789
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L + D +S +TH+++DE+HER +DF+L I+ ++ P L++
Sbjct: 790 RMLEN--------------ADGISEVTHLVIDEVHERSIDTDFLLIILLSLMMKRPDLKV 835
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
ILMSAT+DA +FS+Y G P+I+VPG T+PV++ +LED + + + +N SA+ + +
Sbjct: 836 ILMSATVDAQKFSRYLHGAPIIEVPGRTFPVQAQFLEDAIEL--TGHTNEDASANAV--D 891
Query: 413 EDPELTEENKS 423
ED + E K+
Sbjct: 892 EDEQDDSEQKT 902
>gi|302698459|ref|XP_003038908.1| hypothetical protein SCHCODRAFT_65013 [Schizophyllum commune H4-8]
gi|300112605|gb|EFJ04006.1| hypothetical protein SCHCODRAFT_65013 [Schizophyllum commune H4-8]
Length = 1448
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 219/442 (49%), Gaps = 52/442 (11%)
Query: 547 LIEQLLRKICMD-----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
LI +LL +IC + S AIL+F+PG +I + D L + + F+I PLHS
Sbjct: 897 LIVRLLERICFEDYELQSYSAAILIFMPGINEIRRLNDMLTEHRML-GSDDFIIYPLHST 955
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+ S Q VF PPPG RKI+++TNIAET ITI D+ VID+G+ +E +D +S L
Sbjct: 956 LSSEAQSSVFNVPPPGQRKIVIATNIAETGITIPDITCVIDTGKHREMRFDEKRQISRLI 1015
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
++++K++A QR GRAGR Q G+C+HL+++ R + D +PE+ R+ + +L L++K++
Sbjct: 1016 ETFIAKSNAAQRRGRAGRVQRGLCFHLFTKFRHDKMADHPLPEMMRLSLSDLALRIKIMK 1075
Query: 722 PNC--NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
+IE+ L + LDPP V I+ A+ +L ++ AL+ E++T +G L L + K
Sbjct: 1076 IQLGNSIEEVLLQALDPPQPVNIQRAVSMLVEVRALTPAEEITPMGRLLSKLPTDVHLGK 1135
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
L A L CLDPALT+A + + PF P ++ A F + + SD L +
Sbjct: 1136 FLLTAALFRCLDPALTIAATLNAKSPFVSPFGLEQEADRAKASFRVEN-----SDFLTIH 1190
Query: 840 AAFECWKNA-----KQRGQEAWFCSQYFVSSGV---MNMLLGMRKQLQTELIKNGFI--- 888
AF W+ G FC F+S V + + +R+Q L+ + FI
Sbjct: 1191 NAFATWRRVINNPNNNSGFVKRFCRDSFLSHQVGTNLQQIEDLRQQFLGYLVDSSFIHVD 1250
Query: 889 ----------------------PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKN 926
P S NA +++A L AGLYP +L ++
Sbjct: 1251 RGFIRELQRSRYTRSRTRFVNVPAQFDVNSDNA---FLVNAALAAGLYP---KLLSVDRS 1304
Query: 927 GRRFVETAGGAKVRLHPHSLNF 948
HP S+NF
Sbjct: 1305 SGAMRTITNNQTAFFHPSSVNF 1326
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 180/320 (56%), Gaps = 45/320 (14%)
Query: 115 QDLFTHYPPDDGEPGEKLDANQSRKSD--------KTRG--------------------- 145
Q F PPD + ++LDA + R+ D K RG
Sbjct: 510 QTFFRLLPPDFRDLWDELDAERRRREDAANRETWAKLRGILDEKVQRTNKQQTLKAAKST 569
Query: 146 ---KRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
K I P S + +++ + ++ ++++ R++LPI++++ I S +D
Sbjct: 570 ADVKEAPIVDAPASSNDAFSEQLQESFRVRQASSSYQEMLTYRNQLPIANYRHEILSALD 629
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGE- 261
++QV+++SGETGCGK+TQVP F+LE S G+ CKI CT+PRRISA S+A+R+S E G+
Sbjct: 630 ASQVLVLSGETGCGKSTQVPTFILEDQLSHGKPCKIFCTEPRRISAISLAQRVSRELGDA 689
Query: 262 --NIGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVS 316
+G N +GY IRLES K++ + F TNG+ LR+L S +
Sbjct: 690 PNAVGTNASLVGYSIRLESNTSKNTRLTFVTNGIALRMLESGSGQSGSGTA-------FD 742
Query: 317 ALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQV 376
+THII+DE+HER SDF+L +R +L L++ILMSAT+DA++ ++YFGGCP +QV
Sbjct: 743 EITHIIIDEVHERTIESDFLLLTLRRLLAQRSDLKVILMSATVDAEKIAEYFGGCPTLQV 802
Query: 377 PGFTYPVKSFYLEDVLSILK 396
PG T+PV +LED + K
Sbjct: 803 PGRTFPVDVRFLEDAVETTK 822
>gi|159129227|gb|EDP54341.1| ATP dependent RNA helicase, putative [Aspergillus fumigatus A1163]
Length = 1455
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 225/437 (51%), Gaps = 48/437 (10%)
Query: 543 IDLVLIEQLLRKIC----MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI++LL K+ M S AILVF+PG +I + D +L++P F+ + +++ L
Sbjct: 915 LDYQLIKKLLVKLASAPEMASYSRAILVFMPGMAEIRRLNDEILSDPIFQ--TGWIVHAL 972
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 973 HSSIASEDQEKAFVVPPEGMRKIVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLS 1032
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L +++S+A+AKQR GRAGR Q+GIC+HL+++ R L + Q PE+ R+ +++L L+V
Sbjct: 1033 RLVEAFISRANAKQRRGRAGRVQSGICFHLFTKHRHDKLLAEQQTPEMLRLSLQDLVLRV 1092
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+ +E L + LDPP S IR AI L+++ AL+ E +T LG +L L + +
Sbjct: 1093 KICKLG-EVEQTLLEALDPPSSKNIRRAIDSLKEVKALTNSESLTPLGMQLAKLPLDVFL 1151
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ + CLD +++A + PF + N +K F+ G SD L
Sbjct: 1152 GKLIIHGVFFKCLDACISIAAILSSKSPFVNTMGSNNQKDLARLSFK-----KGDSDLLT 1206
Query: 838 VIAAFECWKNAKQR--GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-------- 887
V A+ W+ + E FC + F+SS + + ++ QL L G
Sbjct: 1207 VYNAYCAWRRTRSTPGANEYAFCRKNFLSSQTLLNIEDIKMQLIVSLADAGLLTLDPTQK 1266
Query: 888 -----------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
IPED + S N V +++V+ YP + + G+ +
Sbjct: 1267 TMLNRARSGGRQRQFFTIPEDYDTNSSNDVV---VNSVIAWSFYPKLL-----TREGKGW 1318
Query: 931 VETAGGAKVRLHPHSLN 947
A V LHP S+N
Sbjct: 1319 RNVANNQSVTLHPTSVN 1335
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 146/224 (65%), Gaps = 20/224 (8%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC 236
+ + +V+ R LPI FKD I +T+D+++ ++I ETG GK+TQ+P F+LEH +G C
Sbjct: 649 SFQHMVQGRMNLPIWEFKDEILNTLDTHRALIICSETGSGKSTQIPSFILEHELKQGRPC 708
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGV 290
KI T+PRRISA S+A R+S E GE+ D IG+ +RLESK + + +VF T GV
Sbjct: 709 KIYVTEPRRISAISLARRVSEELGESKADVGTARSLIGFAVRLESKVSQSTRLVFATTGV 768
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
++R+L +P DD +TH+++DE+HER SDF+L ++R ++ P L
Sbjct: 769 VVRML------------ERP--DDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRPDL 814
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+LILMSATL+A RFS Y GG PV+ +PG T+PV+ +LED + +
Sbjct: 815 KLILMSATLEAQRFSSYLGGVPVLNIPGRTFPVEMKFLEDAIEL 858
>gi|256092860|ref|XP_002582095.1| ATP-dependent RNA Helicase [Schistosoma mansoni]
gi|353228861|emb|CCD75032.1| putative atp-dependent RNA helicase [Schistosoma mansoni]
Length = 1289
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 258/493 (52%), Gaps = 24/493 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N D + +++ + + + + + L+ LL KI + GA+L+FLPGW I+ R
Sbjct: 589 NLKCDPVYGEVVVRSMGEITEKEVPFELVGALLDKIIGMNIPGAVLIFLPGWNIISLLRK 648
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L ++ + + +VI+PLHS +P Q+ VF+ P G RKI+L+TNIAE++ITI+DVV+
Sbjct: 649 YLQSHSRY-GSPNYVILPLHSQIPREDQRLVFRSTPSGVRKIVLATNIAESSITINDVVF 707
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + K + NN+++ +SW SK + +QR GRAGR + G +HL S+ R L
Sbjct: 708 VIDFCLSRTKLFTARNNLTSYSTSWSSKTNLEQRRGRAGRVRPGFAFHLCSRARFDRLEQ 767
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PEI R P+ EL L +KLL ++ DFL K L PP + A L+++ AL ++
Sbjct: 768 HATPEILRTPLHELALLIKLLRLG-SVRDFLMKALQPPPLDAVIEAEHTLKEMKALDKND 826
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KML FA + + A L + AS DPF L P + +R
Sbjct: 827 ELTPLGFILARLPIEPRLGKMLIFACVFNLGGAAAVLTSTASLGCDPFLL---PPDHRRL 883
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWKNAK-QRGQEA--WFCSQYFVSSGVMNMLLGMR 875
T + A+ Y SD LA + F+ W + +RG E+ FC Q+ +S + ++
Sbjct: 884 TNQQRSFAAGYS--SDHLAGLNVFQEWTTERARRGDESADLFCDQHGFNSSALRVIDDAA 941
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVP-----GIIHAVLMAGLYPMVARLRPPHKNGRRF 930
QL+ LI GF E +S N + I+ +L++GLYP + H + R+
Sbjct: 942 NQLRAILINLGFPEESLSDAPVNFNLKHNIDCDILSTLLVSGLYPNICF----HSDKRKL 997
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+ T G + +H S+N K + P V+DE R + + T+V P+ L+L
Sbjct: 998 LTTEGTLAL-IHKSSVNCMKDIKF--NYPFFVFDEKIRTQ-AVSCKGLTMVHPIQLMLFG 1053
Query: 991 TEIAVAPAPDNED 1003
A+ + D+ D
Sbjct: 1054 CRSAIWRSDDSSD 1066
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 151/229 (65%), Gaps = 19/229 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R++ D LR +++ER++LP++ ++ I V N+V +I GETGCGKTTQ+PQF+L+
Sbjct: 348 RLDSDPQLRSLMDERAQLPVNPYRVSILEAVRRNKVTIIRGETGCGKTTQIPQFILDSYL 407
Query: 231 SKG--ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
G C I+ TQPRRISA S+AERI+ ERGE +G ++GY +R E+ + + SI+FCT
Sbjct: 408 ESGIGAECSILVTQPRRISAISLAERIAYERGETVGTSVGYCVRFETVYPRPYGSILFCT 467
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G + R + + + ++H+IVDEIHERD +DFML ++R+M+ +
Sbjct: 468 VGTMARKM----------------EGGLRGVSHVIVDEIHERDVNTDFMLILLREMVRAN 511
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+LRL+LMSAT+D FS+YFG C V+ + G T+PV+ ++LED + ++
Sbjct: 512 RNLRLVLMSATIDITMFSEYFGDCTVLDIEGRTHPVEYYFLEDCIKMVN 560
>gi|71000898|ref|XP_755130.1| ATP dependent RNA helicase [Aspergillus fumigatus Af293]
gi|66852768|gb|EAL93092.1| ATP dependent RNA helicase, putative [Aspergillus fumigatus Af293]
Length = 1455
Score = 224 bits (571), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 225/437 (51%), Gaps = 48/437 (10%)
Query: 543 IDLVLIEQLLRKIC----MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI++LL K+ M S AILVF+PG +I + D +L++P F+ + +++ L
Sbjct: 915 LDYQLIKKLLVKLASAPEMASYSRAILVFMPGMAEIRRLNDEILSDPIFQ--TGWIVHAL 972
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 973 HSSIASEDQEKAFVVPPEGMRKIVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLS 1032
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L +++S+A+AKQR GRAGR Q+GIC+HL+++ R L + Q PE+ R+ +++L L+V
Sbjct: 1033 RLVEAFISRANAKQRRGRAGRVQSGICFHLFTKHRHDKLLAEQQTPEMLRLSLQDLVLRV 1092
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+ +E L + LDPP S IR AI L+++ AL+ E +T LG +L L + +
Sbjct: 1093 KICKLG-EVEQTLLEALDPPSSKNIRRAIDSLKEVKALTNSESLTPLGMQLAKLPLDVFL 1151
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ + CLD +++A + PF + N +K F+ G SD L
Sbjct: 1152 GKLIIHGVFFKCLDACISIAAILSSKSPFVNTMGSNNQKDLARLSFK-----KGDSDLLT 1206
Query: 838 VIAAFECWKNAKQR--GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-------- 887
V A+ W+ + E FC + F+SS + + ++ QL L G
Sbjct: 1207 VYNAYCAWRRTRSTPGANEYAFCRKNFLSSQTLLNIEDIKMQLIVSLADAGLLTLDPTQK 1266
Query: 888 -----------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
IPED + S N V +++V+ YP + + G+ +
Sbjct: 1267 TMLNRARSGGRQRQFFTIPEDYDTNSSNDVV---VNSVIAWSFYPKLL-----TREGKGW 1318
Query: 931 VETAGGAKVRLHPHSLN 947
A V LHP S+N
Sbjct: 1319 RNVANNQSVTLHPTSVN 1335
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 146/224 (65%), Gaps = 20/224 (8%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC 236
+ + +V+ R LPI FKD I +T+D+++ ++I ETG GK+TQ+P F+LEH +G C
Sbjct: 649 SFQHMVQGRMNLPIWEFKDEILNTLDTHRALIICSETGSGKSTQIPSFILEHELKQGRPC 708
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGV 290
KI T+PRRISA S+A R+S E GE+ D IG+ +RLESK + + +VF T GV
Sbjct: 709 KIYVTEPRRISAISLARRVSEELGESKADVGTARSLIGFAVRLESKVSQSTRLVFATTGV 768
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
++R+L +P DD +TH+++DE+HER SDF+L ++R ++ P L
Sbjct: 769 VVRML------------ERP--DDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRPDL 814
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+LILMSATL+A RFS Y GG PV+ +PG T+PV+ +LED + +
Sbjct: 815 KLILMSATLEAQRFSSYLGGVPVLNIPGRTFPVEMKFLEDAIEL 858
>gi|407923441|gb|EKG16512.1| Helicase [Macrophomina phaseolina MS6]
Length = 1226
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 232/430 (53%), Gaps = 45/430 (10%)
Query: 543 IDLVLIEQLLRKI--CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
I+ LI Q ++ I + +DGAIL+FLPG +I++T L P +PLH+
Sbjct: 671 INYDLIAQTVQYIDAQLGPQDGAILIFLPGTMEIDRTLQALRPMPNLH------ALPLHA 724
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ +Q++VF PP G RK+I TN+AET+ITI+DVV VID+GR+KE S+DP NN+ L
Sbjct: 725 SLLPAEQRRVFPPPPKGKRKVIACTNVAETSITIEDVVAVIDTGRVKETSFDPSNNMVKL 784
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQL----RAASLPDFQVPEIKRIPIEELCLQ 716
+W S+A+ KQR GRAGR +AGICY LY++ + PD PEI+R+P+E+LCL
Sbjct: 785 AETWASRAACKQRRGRAGRVRAGICYKLYTRNVERDKMLERPD---PEIRRVPLEQLCLS 841
Query: 717 VKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL 776
VK + ++ FL L PP SV + A+ +L +GA+ E++T LG L +
Sbjct: 842 VKAMGVK-DVASFLAGALTPPDSVAVEGALELLGRMGAID-GEEMTALGRHLSVVPADLR 899
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
+K++ + CL+ LT+A R PF P + E+ +A + F GQ D +
Sbjct: 900 CAKLMVYGATFGCLESCLTMASILTVRSPFVSPQAKREESKAARSSFG-----KGQGDLV 954
Query: 837 AVIAAFECWKNAKQRG-----QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED 891
A + A+E W K++G AW C Q F+S+ +N + R+Q + L + GFIP
Sbjct: 955 ADLRAYEHWTGLKEKGISPRDLRAW-CEQNFLSTQTLNDITSNRRQYLSSLQETGFIPLR 1013
Query: 892 VSSCS------------HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKV 939
SS S HNA ++ A++ P +AR+ P K +F + GA V
Sbjct: 1014 YSSYSASAAQETASLNLHNAN-DALLRALIAGSFNPQIARIDFPDK---KFAASVSGA-V 1068
Query: 940 RLHPHSLNFK 949
L P + K
Sbjct: 1069 ELDPEARTIK 1078
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
++++ R LP + + I V+ +QVV+ISGETG GK+TQ QF+L+ + + GE
Sbjct: 423 QRMLRARENLPAWNLQQAIVDAVNKHQVVIISGETGSGKSTQSVQFILDDMIQRQLGEAA 482
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLLRLL 295
IVCTQPRRISA +A+R++ ER +GD +GY IR ES+ + + F T GVLLR
Sbjct: 483 NIVCTQPRRISALGLADRVADERCTAVGDEVGYSIRGESRNKPGVTKLTFMTTGVLLR-- 540
Query: 296 VSQGVSRLKEASNKPAKDDVSA----LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
RL+ + +P +DV A +TH++VDE+HER +DF+L ++RD+L LR
Sbjct: 541 ------RLQTSGGRP--EDVIASLADITHVVVDEVHERSLDTDFLLVLLRDVLKKRKDLR 592
Query: 352 LILMSATLDADRFSQYF----GGCPVIQVPGFTYPVKSFYLEDVLSI 394
+ILMSATLDAD F+ YF G ++++ G T+PV +Y++DV+ +
Sbjct: 593 VILMSATLDADVFASYFKPAVGEVGMVEIAGRTHPVTDYYVDDVIRM 639
>gi|302829420|ref|XP_002946277.1| hypothetical protein VOLCADRAFT_86387 [Volvox carteri f. nagariensis]
gi|300269092|gb|EFJ53272.1| hypothetical protein VOLCADRAFT_86387 [Volvox carteri f. nagariensis]
Length = 2100
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 252/549 (45%), Gaps = 106/549 (19%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFF----- 587
+ LA ++ ID L+E LL I +E GA+LVFLPG +IN DRL A +
Sbjct: 1474 RNLARLDEHRIDYDLLEALLSYIDATTEPGAVLVFLPGIGEINHLYDRLTAQRAYSGLRG 1533
Query: 588 -------RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYV 640
++ V++PLHS VP Q+ + PPPG RK++L+TNIAET++TI+DVV V
Sbjct: 1534 GGGGAAVYGGARCVVLPLHSAVPPAGQRAALRPPPPGLRKVVLATNIAETSLTIEDVVAV 1593
Query: 641 IDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLR-AASLPD 699
+D+G+ KE+ ++P ++S L WVS ASA+QRAGRAGR + G+ Y Y++ R L
Sbjct: 1594 VDTGKHKERRFNPARSMSMLVEDWVSAASAQQRAGRAGRVRPGVSYATYTRARFEGGLRR 1653
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
+ PEI R+P+EEL LQ+ L+ + DFL + L+PP + A+ VL
Sbjct: 1654 YGAPEITRVPLEELVLQILLMGLG-PVSDFLSRVLEPPQPRAVAAALEVL---------- 1702
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYR-------------DPF 806
+ LG +L L V P + K+L L+ CL PA+T+A A ++ PF
Sbjct: 1703 --SPLGRQLALLPVGPRLGKLLVLGALLGCLAPAVTIAAAMSHKWVFVRRGLRRRRRSPF 1760
Query: 807 TLPISPNEKKRATAAKFELAS----LYGGQSDQLAVIAAFECWKNA---KQRGQ---EAW 856
P + G QSD L ++AA+E W+ A K G A
Sbjct: 1761 LTPADDRGEAERARRALAAPGSEGIAAGQQSDHLLLVAAYELWRVAASPKYGGGTRLAAQ 1820
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELI--------------------------------- 883
++F+ + L MR QL L
Sbjct: 1821 VARRHFLHVQTLEQLSEMRCQLAAMLADARLVQPGGERSGGRGGAYGDGDGGGGGFGGGG 1880
Query: 884 ------KNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARL-------RPPHKNGRRF 930
++ + + + AR P ++ A L A L P VA + PP R+
Sbjct: 1881 KAAMAAAAAWLDDPTAPWNKFARDPLVVKAALCAALSPAVAVMGEDSSPTSPP-----RW 1935
Query: 931 VETAGGA----KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPL 986
+ A GA +V +HP S+ L+ + P +VY E + + +R+ T V PL L
Sbjct: 1936 TDAAPGAGAGEEVFVHPSSVVAALNTPQLHH-PYLVYLEKVK-TARLFLRDVTSVSPLCL 1993
Query: 987 LLLATEIAV 995
+L + V
Sbjct: 1994 MLFGGPLTV 2002
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 132/267 (49%), Gaps = 68/267 (25%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+++ ++ + + R + + + R+ LPI++ K + + VV++SG+TGCG
Sbjct: 1170 TESAVSASLRAALERWQDSPAGQAMASARAALPIAAVKGELLEALRQGDVVVVSGDTGCG 1229
Query: 217 KTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENI------GDNIGYK 270
KTTQ PRRI+A SVAER++ ERGE GY
Sbjct: 1230 KTTQ----------------------PRRIAAISVAERVAEERGEPPPGSPGPASTTGYH 1267
Query: 271 IRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
+RL + +H+ + FCT G+LLR L + P+ + +TH++VDE+HER
Sbjct: 1268 VRLGAAVTRHTRLTFCTTGILLRRL-----------AGDPS---LHGVTHVVVDEVHERS 1313
Query: 331 RYSDFMLAIIRDMLPSYPHL--------------------------RLILMSATLDADRF 364
SDF++A++RD+L + +++LMSATLDA F
Sbjct: 1314 LQSDFLIALLRDLLAARRAQQQQQQQPEGTEGADSPLPPPPPAPALKVVLMSATLDAKLF 1373
Query: 365 SQYFGGCPVIQVPGFTYPVKSFYLEDV 391
+ YFGGCPV+ G T+PV +LEDV
Sbjct: 1374 ANYFGGCPVLHAAGRTFPVSRLFLEDV 1400
>gi|407425863|gb|EKF39538.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 1260
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 260/504 (51%), Gaps = 36/504 (7%)
Query: 515 KKHMENALSDSMKQQLLDKYLATV------NPE-LIDLVLIEQLLRKICMDSED--GAIL 565
KK L D + +K ATV +PE L+ L+ +L+ I S + +IL
Sbjct: 524 KKSKNGNLEDGNNGSIFEKIKATVFGETDNDPEALVPYDLVFKLISYIHASSRELSESIL 583
Query: 566 VFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILST 625
VFLPGW I++ + +P R+ S ++ LHS + + +Q++VF RPP RK++LST
Sbjct: 584 VFLPGWASISRVNTMIQRSPIARELS---VLQLHSSLTAAEQQRVFYRPPKRFRKVVLST 640
Query: 626 NIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIC 685
NIAE ++TIDD+VYVIDS K YD N S L+++++SKA+ QR GRAGRC+AG+C
Sbjct: 641 NIAEASVTIDDIVYVIDSCLTKGTFYDACGNTSVLKATFISKANGMQRRGRAGRCRAGVC 700
Query: 686 YHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNA 745
HL + LP+F +PEI R P+EE+CLQVK L P+ L + +DPP + + +A
Sbjct: 701 VHLIPRSAYEKLPEFLLPEIMRSPLEEVCLQVKALKPDEGCAKVLSRAMDPPPADSTEHA 760
Query: 746 IIVLQDIGALSLD-EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRD 804
+ L+D+GA + + E++T LG L L +HPL+ KML A + L+P +T+A +
Sbjct: 761 VRFLKDMGAFTFEKEQMTNLGRALSKLPIHPLLGKMLLAAACLGVLEPVVTIAAYLSGKS 820
Query: 805 PFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVS 864
PF P+ +K A +L G SD L V+ F+ WK + A + Q F
Sbjct: 821 PFIKPLP--HQKNAMRNAIQLID-NGLLSDHLTVMKLFDEWKKS---NCSADYAMQNFAD 874
Query: 865 SGVMNMLLGMRKQLQTELIKNGFIPEDVSS----CSHNARVPGIIHAVLMAGLYPMVARL 920
V+ + +RKQL L+K+ + V S ++ G+I V + LYP +A +
Sbjct: 875 QTVLRSMDRIRKQL-LRLVKDSSLLRKVEDPMRMASRHSSNLGLIRLVALWSLYPRIASV 933
Query: 921 RPPHKNGRR----FVETAGGAKVRLHPHSLNFKLSFKKTDDC---PLMVYDEITRGDGGM 973
K R+ F A+ ++ L+FK D + Y E + +
Sbjct: 934 EYRAKRNRKGPEIFCWDNKAAQC-----AMGSALAFKTRGDFRDRAFVFYHERMYIEANL 988
Query: 974 HVRNCTVVGPLPLLLLATEIAVAP 997
V + + V P+ L E A+ P
Sbjct: 989 TVFDASAVTPVEAALCLREFALRP 1012
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 203/425 (47%), Gaps = 74/425 (17%)
Query: 13 QQKQQQQQSPTVAEATRIRISQILDGFLASKDEVY---------------TFDANLSNRE 57
Q Q+Q S +V ++S + + +K +Y +F LS E
Sbjct: 107 QNPFQEQNSVSVTAVANPKVSAFNEEGVWTKKNLYAMVKAFVDDPNADEMSFPPTLSAAE 166
Query: 58 RAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDL 117
R +VHE+ + +S+G +R +++ K++ + K +E + G+++ D
Sbjct: 167 RLMVHEIALNFNLNHRSAGCKSERVLTL----KKIGSIKNQEKDREIAALNGNRVKTIDG 222
Query: 118 F--THYPPDD-------------GEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIA 162
+ PD+ G K+ + + K R + +P + KA
Sbjct: 223 YQGAQRLPDEYIKSKMNEISLLLGPFLRKMYSQLKTTAAKPLRNRHLVVVQPGLKKAPQG 282
Query: 163 MKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVP 222
+ R++ E R LP +D I + + N V+++SG+TGCGKTTQ+P
Sbjct: 283 DT---------QHQRYRELQEFRRSLPSYKRRDEIINALKKNNVLIVSGDTGCGKTTQIP 333
Query: 223 QFLLE-HIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHS 281
Q L + ++ K +I+CTQPRRISA SVA+R++ ERGE G++ GY IR ++ +
Sbjct: 334 QILYDSEVFQKD--LEIICTQPRRISALSVAQRVAEERGETCGNSCGYIIRFDNMTSPST 391
Query: 282 SIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIR 341
I++ T G+LLR L P + VS IIVDE+HERD +DF L ++R
Sbjct: 392 KIIYMTTGILLRRL-----------HTDPQLNGVSC---IIVDEVHERDVETDFCLLLLR 437
Query: 342 DMLPSYP--------HLRLILMSATLDADRFSQYF----GGC--PVIQVPGFTYPVKSFY 387
D L H+++++MSAT+ ++ + YF GG P++ +PG +PV+ +
Sbjct: 438 DRLIEQQRNNQLYKNHVKVVVMSATVQIEKVASYFACVCGGKAPPIVSIPGTLFPVEECF 497
Query: 388 LEDVL 392
LE+ L
Sbjct: 498 LEEAL 502
>gi|307104594|gb|EFN52847.1| hypothetical protein CHLNCDRAFT_138311 [Chlorella variabilis]
Length = 1640
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 207/383 (54%), Gaps = 31/383 (8%)
Query: 535 LATVNPELIDLVLIEQLLRKICM-----------------DSEDGAILVFLPGWEDINK- 576
LA V+ LI+ LIE L+ + + AIL+F PG ++I++
Sbjct: 1061 LANVDESLINTDLIEALVAHLAATRAAQQAQQGGGKRRGAGDDANAILIFAPGADEISRI 1120
Query: 577 --TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITI 634
T +++PLH +P QQ +VF RPP G KI+++TN+AET+ITI
Sbjct: 1121 CRTLSASGRVAAAAGGGGVLVLPLHGGLPPSQQSRVFNRPPKGTLKIVVATNVAETSITI 1180
Query: 635 DDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA 694
DDV V+D+GR+KE +D ++ LQ ++VS+A+A+QR GRAGR + GICY L+S+
Sbjct: 1181 DDVTAVLDTGRVKEMRFDAARGIARLQETFVSQAAAQQRRGRAGRVRPGICYRLFSRRTW 1240
Query: 695 ASLPDFQVPEIKRIPIEELCLQVK-LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIG 753
+P PEI+R P++ L L VK +L ++ L + + PP ++ A+ LQ IG
Sbjct: 1241 ERMPRDTPPEIRRAPLQGLVLDVKGILGATADVPALLARMITPPEPAALQRALTSLQLIG 1300
Query: 754 ALSLDE-KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISP 812
AL +T LG+ L + P + KML + L+ CLDP LT+A A + P +P
Sbjct: 1301 ALEAGSGALTSLGQHLTRMPCDPRIGKMLLYGSLLRCLDPVLTIAAAQGWGRPVFWS-AP 1359
Query: 813 NEKKRATAAKFELAS-LYGGQSDQLAVIAAFECW-----KNAKQRGQEAWFCSQYFVSSG 866
++++ A AA+ +A+ + +SD LAV+AA+ W K+ +Q E FC + F++
Sbjct: 1360 DKREEAEAARRSVAANVAASKSDHLAVVAAYNSWRAVVEKDGRQAAHE--FCGRSFLADQ 1417
Query: 867 VMNMLLGMRKQLQTELIKNGFIP 889
+ + R+Q L GF+P
Sbjct: 1418 ALEAIDAGRRQYAELLADLGFVP 1440
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 108/182 (59%), Gaps = 23/182 (12%)
Query: 220 QVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG 277
+VPQFLLE + G C I+ TQPRRISA +A R++ ERGE +G +GY +RL+SK
Sbjct: 837 EVPQFLLEQAIAAGAGAACNIIVTQPRRISAVGLASRVAAERGEAVGATVGYSVRLDSKQ 896
Query: 278 GKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFML 337
+ ++FCT G+LLR L+ + TH+++DE+HER SD +L
Sbjct: 897 SHRTRLLFCTTGILLRRLLGD--------------PSLGGTTHVVLDEVHERSIESDLLL 942
Query: 338 AIIRDMLPSY--PHLRLILMSATLDADRFSQYFG---GCPVIQ--VPGFTYPVKSFYLED 390
++R +L P L+++LMSAT DA F+ YF G P Q +PGFT+PV F+LED
Sbjct: 943 LLLRGLLELGRNPGLKVVLMSATADAGLFASYFEAALGEPAGQLTIPGFTHPVTDFFLED 1002
Query: 391 VL 392
L
Sbjct: 1003 AL 1004
>gi|345563582|gb|EGX46570.1| hypothetical protein AOL_s00097g640 [Arthrobotrys oligospora ATCC
24927]
Length = 1418
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 215/397 (54%), Gaps = 37/397 (9%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL-LANPF---FRDTSKFVIIPLHSMV 602
LI ++ + ++ G ILVFLPG +I + L L+ P F+++ + I LHS +
Sbjct: 838 LIAIVIAHLAKTTDAGDILVFLPGLAEIKLVDEMLRLSAPLGVDFQNSDTYRIDILHSSL 897
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P QQ VF G RK+ILSTNIAET++TI +V YV+DSG+++EK ++ + ++ LQ
Sbjct: 898 PQ-QQMDVFHANAAGKRKVILSTNIAETSVTIPEVRYVVDSGKLREKRFEQTSRITKLQC 956
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
+W+SK+++KQRAGRAGR + G Y L+++ R +PEI R ++E+CL ++
Sbjct: 957 TWISKSNSKQRAGRAGRVRNGNYYALFTKERFTEFRPSSLPEILRSDLQEICLDIRAQGF 1016
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + ++PP S +I A+ L+ +GAL DE +T LG+ L + V P + KM+
Sbjct: 1017 KDPIAQFLSEAIEPPSSASIEAALSQLRGLGALEKDETLTNLGKVLATMPVEPALGKMIL 1076
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKR-ATAAKFELASLYGGQSDQLAVIAA 841
++ CLDP + L AS R+ F +SP E+KR A A K A G SD +A+I A
Sbjct: 1077 LGVIFKCLDPMIILGAASGSRELF---VSPMERKREAQAIKKTFAK--GTGSDHMAIINA 1131
Query: 842 FECWKNAKQRGQEAWFCS-----QYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS 896
F W+ +R E+ F + + F+ G + ++ Q++ L+ G IP
Sbjct: 1132 FREWRT--RRDNESMFATSRFTEENFLHRGALRVIDQTANQIEEILVTEGIIP----YLK 1185
Query: 897 HNARVPG---------------IIHAVLMAGLYPMVA 918
N R G +I A+ +AG YP V
Sbjct: 1186 KNQRFKGEYGHPRLNENSASIPLIKALSLAGTYPNVG 1222
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 141/243 (58%), Gaps = 29/243 (11%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGE 234
D +L ++ +R+ LP++ + V +N V +I G TG GKTTQVPQ LLE GE
Sbjct: 532 DQSLEELRTKRADLPMNQHAAQVLGIVKNNPVSIIVGATGSGKTTQVPQILLEDAVKGGE 591
Query: 235 --TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVL 291
C I+CTQPRRI+ATSVA+R++ ER E + IGY +R +SK + SI FCT G+L
Sbjct: 592 GALCNIICTQPRRIAATSVAQRVAEERNEPLRKTIGYHVRFDSKVAAPNGSINFCTTGIL 651
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH-- 349
L+ L S L+ ++HI++DE+HERD DF++ +++ ++
Sbjct: 652 LQQLRSNAEVALR------------GVSHILIDEVHERDIQIDFLMVLLKRVMRQREQQG 699
Query: 350 ---LRLILMSATLDADRFSQYFGG---------CPVIQVPGFTYPVKSFYLEDVLSILKS 397
++++LMSAT++ + F+ YF CP + VPG T+PV ++L++V S+L +
Sbjct: 700 LSPIKVVLMSATMNTELFAGYFAKMQENGRLKDCPSLSVPGRTFPVAEYFLDEVQSMLAA 759
Query: 398 AES 400
S
Sbjct: 760 QYS 762
>gi|3650397|emb|CAA77038.1| maleless protein [Sciara ocellaris]
Length = 1252
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 243/467 (52%), Gaps = 28/467 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A+++ + LIE LL I + GA+LVFLPGW I L + F S F
Sbjct: 624 MASMSESEVSFELIEALLIFIKQKNVPGAVLVFLPGWNLIFALMKHLQSGRF--GGSDFR 681
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+P HS +P Q+KVF+ PPG KIILSTNIAET+ITIDD+VYVID + + K + +
Sbjct: 682 ILPCHSQIPREDQRKVFEPVPPGVTKIILSTNIAETSITIDDIVYVIDICKARMKLFTSH 741
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+++ + W SK + +QR GRAGR + G C+ L S+ R A L + PE+ R P+ EL
Sbjct: 742 NNMTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARYAKLDEHLTPEMFRTPLHELA 801
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A +VL+D+ L+ ++ ++ LG+ L L +
Sbjct: 802 LSIKLLRLGA-IGQFLSKAIEPPPLDAVIEAEVVLRDLKCLNQNDDLSPLGKILARLPIE 860
Query: 775 PLMSKMLFFAILMDCLDPALTLACAS-DYRDPFTLPISPNEKKRATAAKFELASLYGG-- 831
P + KM+ + C D +A S + + FTL + ++R + + L GG
Sbjct: 861 PRLGKMMVLGCIFLCGDALGAMAAYSGTFSEVFTLDLG---QRRLSNHQKAL----GGTK 913
Query: 832 QSDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP 889
SD +A++ A W A+ +G +E FC + M ++ ++QL L ++GF P
Sbjct: 914 HSDHVAMLVASHMWNRARDKGEDEEVRFCEWKGLQLPTMRVMFEAKRQLLDLLQQSGF-P 972
Query: 890 EDVSSCSH---NARVPGI--IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPH 944
E+ H N P + A+L GLYP V HK R+ + T A + +H
Sbjct: 973 EETLLNMHIDQNGSDPKLDMTLALLCMGLYPNVCY----HKEKRKVLTTESKAAL-IHKT 1027
Query: 945 SLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
S+N + T P V+ E R + + ++V P+ L+L +
Sbjct: 1028 SVNCT-NLAITFPYPFFVFGEKIRTR-AVSCKQMSMVAPIHLILFGS 1072
Score = 213 bits (541), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 153/229 (66%), Gaps = 19/229 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+++ D L + ++ R LP+++ K+ I + ++ N VV++ G TGCGKTTQ+ Q++LE
Sbjct: 366 KLQNDNELIERMKFRETLPVAAMKNEIMTLINDNSVVIVKGATGCGKTTQIAQYILEDYV 425
Query: 231 SKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
+ G+ C I TQPRRISA SV+ERI+VER ENIG+++GY +R ES + +I+FCT
Sbjct: 426 NSGQGAWCNIAITQPRRISAISVSERIAVERNENIGESVGYSVRFESCLPRPFGAIMFCT 485
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L EA + ++H+IVDEIHERD SDF+L ++RDM+ +Y
Sbjct: 486 IGVLLRKL---------EAG-------LRGVSHVIVDEIHERDVNSDFILVVLRDMVHTY 529
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
P LR+ILMSAT+D FS YFG CPVI++PG +PV +LED + + K
Sbjct: 530 PDLRVILMSATIDTTLFSDYFGKCPVIEIPGRAHPVTQLFLEDCIEMTK 578
>gi|17507503|ref|NP_492260.1| Protein F52B5.3 [Caenorhabditis elegans]
gi|3877406|emb|CAA99855.1| Protein F52B5.3 [Caenorhabditis elegans]
Length = 1425
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 174/608 (28%), Positives = 287/608 (47%), Gaps = 73/608 (12%)
Query: 461 TGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMEN 520
+GL G G + LL +LK TAL P++ ++ K
Sbjct: 552 SGLAKFTPFGGFGEKQRISTLLEKKFKEELK-----TALPDRTVYYHPQMNDVVDK---- 602
Query: 521 ALSDSMKQQLLDKY---LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKT 577
+D K + +KY + + +D VL++Q+++ + G ILVFLPG+EDI +
Sbjct: 603 --TDFSKLRFGEKYNLFYGSSSNNSVDYVLLDQVIQYLADSPVFGTILVFLPGYEDIQQM 660
Query: 578 RDRL-LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
+ ++ +++PLHS + S+ +FK P RKIIL+TNIAE +ITI+D
Sbjct: 661 LKAIDCWKNSLKNMKNVIVLPLHSQMTSINHGDIFKSVPKDTRKIILATNIAEASITIED 720
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
V++V+D+G++KEKS+D +STL +++++A QR+GRAGR G C LY++ S
Sbjct: 721 VIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGRVANGYCIRLYTEQEYNS 780
Query: 697 LPDFQVPEIKRIPIEELCLQVKLLDPNC-NIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL 755
+P+ Q+ E+KR I ++ L KL P I +FL +PP +I AI L+ IGA
Sbjct: 781 MPETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEPPEKESILQAITFLEQIGAF 840
Query: 756 SL---------------------------DEKVTELGEKLGCLSVHPLMSKMLFFAILMD 788
D ++T+LG + L + P +S+ML F + +
Sbjct: 841 YTPIKIYDNSGNEEGLKNDEEAENSENPEDPELTDLGRLMARLPLDPQLSRMLLFGLALK 900
Query: 789 CLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFE--CWK 846
CL P + L R+P+ L +S ++ + KFE+A SD L I C K
Sbjct: 901 CLTPIVNLVALLASREPYVLALS-EDRDLQSKMKFEMAQ--QDLSDHLLYIRLCNEFCSK 957
Query: 847 NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSC------S 896
N Q+ Q FC +F++ M M+ G R+QL EL++ I DV + +
Sbjct: 958 NNSQQNQ---FCRDHFLNFSTMRMVQGTRRQLLRELVRAKLINISPNRDVLTVLTDHHFN 1014
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK--LSFKK 954
++ +I AV+ AG YP + + N ++ V+T LHP S+ K + K
Sbjct: 1015 QFSQCWPMIQAVIAAGCYPFIG-VSASESNLKK-VQTFNDKPAFLHPSSMVKKQIVKMGK 1072
Query: 955 TDDCPLMVYDEITR-----GDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDD---DE 1006
++ P + Y D + ++ TV+ + LL I + +++ +E
Sbjct: 1073 SEKSPRVEYVAFQEMCQMPSDRSLSMKTVTVIPSMTALLFTGPIRLDERTIEDNNIIFEE 1132
Query: 1007 DDDMSDDD 1014
+D+S +D
Sbjct: 1133 GEDISVED 1140
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 197/370 (53%), Gaps = 46/370 (12%)
Query: 33 SQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRV 92
++I+ FL S + T + + +R V+HEV MT+KS GR R + + K R+
Sbjct: 46 NEIIRSFLKSGQKNTTLEP-MGRDQRKVMHEVALLNEMTTKSHGREPDRYMILSKRVNRL 104
Query: 93 ETDK---GKEILPSLT-FSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRV 148
+ I PS + SK V + +P E E L Q+++ T+G
Sbjct: 105 SKSTLVATEPITPSFECLQKLSKFVEK-----HPITREEMDEFLTETQTKQMHTTKGHIS 159
Query: 149 DIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVL 208
D P SK +++ + R+ LP S + D + ++ S VV+
Sbjct: 160 DRMVIPPKSKCS------------------KELQKVRNSLPASKYCDQVLKSISSCNVVI 201
Query: 209 ISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIG 268
ISG TGCGKTTQVPQF+L+ + +++ TQPRRI+A S+AER++ ERGE IG +G
Sbjct: 202 ISGGTGCGKTTQVPQFILDEAHENNKHVRVMVTQPRRIAAISIAERVARERGEPIGRTVG 261
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y++RL+S+ + + +CT GVLLR+L S V+ S +THI++DEIHE
Sbjct: 262 YQVRLDSRRSDDTVLTYCTTGVLLRMLTSDPVA--------------SGITHIVMDEIHE 307
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADR--FSQYF--GGCPVIQVPGFTYPVK 384
R+ +D++L +R+ L P L++ILMSAT++ + FS YF VI++ + VK
Sbjct: 308 REINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSNYFENHSMDVIRIESRAFDVK 367
Query: 385 SFYLEDVLSI 394
FYL+ +L++
Sbjct: 368 VFYLDQILAM 377
>gi|296425027|ref|XP_002842045.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638302|emb|CAZ86236.1| unnamed protein product [Tuber melanosporum]
Length = 1488
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 242/463 (52%), Gaps = 53/463 (11%)
Query: 522 LSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKT 577
L D+++ L L+ +N I+ LI +L+ + E AIL+F+PG+ +I +
Sbjct: 920 LEDAIR--LTQDTLSRLNLHHINYELIVRLIDFVGSSPEYVDYSKAILIFMPGFAEIRRL 977
Query: 578 RDRLLANPFF---RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITI 634
D L+A+P F R ++I PLHS + S Q+ F PP G RKI+++TNIAET ITI
Sbjct: 978 NDMLIAHPTFGNNRGDGGWLIYPLHSTIASEDQEAAFSIPPSGMRKIVIATNIAETGITI 1037
Query: 635 DDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA 694
DV VID+G+ KE +D +S L ++VS+A+AKQR GRAGR Q G+C+HL+++ +
Sbjct: 1038 PDVTCVIDTGKHKEMRFDEKRQLSRLVETFVSRANAKQRRGRAGRVQKGLCFHLFTKSQH 1097
Query: 695 AS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIG 753
+ + + Q PEI R+ +++L L++K+ +E+ L + LD P+ IR AI L ++
Sbjct: 1098 NNWMVEQQTPEIMRLSLQDLVLRIKICRLG-QVEEVLSQALDAPLPKNIRRAIDSLLEVK 1156
Query: 754 ALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPN 813
AL++ E++T LG +L L + + K++ + CLD ALT+A + PF PI
Sbjct: 1157 ALTVAEELTALGRQLAKLPLDVYLGKLVLMGSIYGCLDAALTIAAILSSKSPFVTPI--G 1214
Query: 814 EKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNM 870
KK A + + S SD L A+ W+ QR E+ FC + ++SS +
Sbjct: 1215 HKKEAESCRL---SFKRADSDLLTGWNAYSSWRRVCQRKTMMSESEFCQRNYLSSRNLLG 1271
Query: 871 LLGMRKQLQTELIKNGF--------------------------IPEDVSSCSHNARVPGI 904
+ +++QL +++ F +PE V+ S N I
Sbjct: 1272 IEELKQQLLVSVVEARFLTLKEEEKAELNRCRFSTYYRRNFFIVPESVNYSSEN---DSI 1328
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+++V+ A YP +L NG R + ++ +HP S+N
Sbjct: 1329 VNSVIAASFYP---KLLAKGGNGWRNI--LNNHRIAIHPSSVN 1366
Score = 182 bits (463), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 143/225 (63%), Gaps = 21/225 (9%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
+ + ++E R KLP+ +FK+ + + ++ NQV++I GETGCGK+TQ P F+LEH S+G++
Sbjct: 717 SGYQHMLEHRRKLPMWAFKEDVLAAMEKNQVIIICGETGCGKSTQTPAFILEHELSQGKS 776
Query: 236 CKIVCTQPRRISATSVAERISVERGE---NIGDN---IGYKIRLESKGGKHSSIVFCTNG 289
C+I CT+PRRISA S+A R+S E GE +G +GY IRLE + + +++ T
Sbjct: 777 CRIYCTEPRRISAISLARRVSEELGERKSEVGSKSSLVGYAIRLEGRMHSGTRLIYATTA 836
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
L+S ++ +TH+++DE+HER SDF+L +++ +L
Sbjct: 837 CFFSFLLS---------------PELEEVTHLVLDEVHERSIDSDFLLLVLKKLLVQRKD 881
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
LR++LMSAT+DADR S Y G PV+ PG T+PV+++YLED + +
Sbjct: 882 LRVVLMSATVDADRLSAYLGDAPVMVAPGRTFPVETYYLEDAIRL 926
>gi|449301755|gb|EMC97764.1| hypothetical protein BAUCODRAFT_59313, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1307
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 226/401 (56%), Gaps = 25/401 (6%)
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
+ +E+G IL+FLPG +I++T RL RD +PLH+ + S +Q++VF + P
Sbjct: 794 LGAEEGGILIFLPGTMEIDQTLRRL------RDLPNLYALPLHAGLQSSEQRRVFAKSPK 847
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
G RK++ +TN+AET+ITIDD+V VID+GR+KE S+D +N+ L +W SKA+ KQR GR
Sbjct: 848 GKRKVVAATNVAETSITIDDIVAVIDTGRVKETSFDAADNMVRLTETWASKAACKQRRGR 907
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDP 736
AGR +AG CY L+++ + +++ + PEI+R+P+E+LCL VK + + ++ FL L P
Sbjct: 908 AGRVRAGKCYKLFTRHQESNMAERPEPEIRRVPLEQLCLSVKAMGVD-DVPAFLASALTP 966
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P +++I NAI++L +GAL + K+T LG+ L + K++ + + CLD LT+
Sbjct: 967 PETLSIANAILLLGRVGALEKN-KLTALGQHLSQIPADLRCGKLIVYGVAFGCLDACLTI 1025
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEA- 855
A + PF P + ++ +A A F GQ D +A + AFE W + + +G+
Sbjct: 1026 AATLTIKSPFVSPQTKRDEAKAAKAVFG-----KGQGDPIADLRAFEEWSHRRSKGEPTS 1080
Query: 856 ---WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS-----HNARVPGIIHA 907
+C + F+S + + R Q T L + GFIP S HNA P ++ +
Sbjct: 1081 SLRRWCDENFLSHQTLMDVATTRSQYATSLQEIGFIPPYGSHVPETLNLHNANDP-LLRS 1139
Query: 908 VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
++ P +AR+ P + + AG V H + +
Sbjct: 1140 LIAGAFQPQIARIDFP--DAKYKASAAGAVAVDPEAHMIKY 1178
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 139/226 (61%), Gaps = 12/226 (5%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG-- 233
A + ++ R LP D I ++V NQV +ISGETG GK+TQ QF+L+ + +G
Sbjct: 516 AEQQNMLRIRQNLPAWKLNDKIVASVHVNQVTIISGETGSGKSTQSVQFVLDDLIQQGFG 575
Query: 234 ETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLL 292
E I+CTQPRRISA +A+R++ ER +G+ +GY IR ESK + I F T GVLL
Sbjct: 576 EQANIICTQPRRISALGLADRVADERCGRVGEEVGYIIRGESKHKPGLTKITFVTTGVLL 635
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R L + G S + D ++ +TH+++DE+HER +DF+L ++RD+L L+L
Sbjct: 636 RRLQTSG------GSAQDVVDSLADITHVVIDEVHERSLDTDFLLVLLRDVLEMRKDLKL 689
Query: 353 ILMSATLDADRFSQYFGGCPV---IQVPGFTYPVKSFYLEDVLSIL 395
ILMSATLDA+ F +YF I++ G T+PV+ Y ED+L ++
Sbjct: 690 ILMSATLDAEVFERYFSSVSTVGKIEIAGRTHPVQDVYREDLLRLI 735
>gi|194767131|ref|XP_001965672.1| GF22621 [Drosophila ananassae]
gi|190619663|gb|EDV35187.1| GF22621 [Drosophila ananassae]
Length = 995
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 257/505 (50%), Gaps = 29/505 (5%)
Query: 513 IIKKHMENALSDSMKQQLLDKYLA--TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+++ H+ L +LL+ Y A T+ ID LI LL + + GA++V+LPG
Sbjct: 427 MMEPHLGEMLETEDPNELLEAYNASRTLADGEIDNDLIVSLLELLLHHGDTGAVIVYLPG 486
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
+ D+ ++R+ K ++ LHS V S +Q+K F+ P KI+LSTNI +T
Sbjct: 487 YHDMTVLQERI---EELLPKEKIKVLLLHSQVDSNEQRKAFRVFPNIRLKIVLSTNIGQT 543
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI D+VYVID+GR K K+YDP + S L ++W+S+A AKQRAGRAGR + GICY LYS
Sbjct: 544 SITIPDLVYVIDTGRSKMKTYDPNTDASQLATAWISQADAKQRAGRAGRLRNGICYRLYS 603
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
Q R S+ + +PE+ R ++E+CL KL P I FL + LDPP + + A L
Sbjct: 604 QARHDSMSLYTIPEMMRRTLDEICLLAKLAGPEQPIAKFLSQALDPPQTEAVVQACARLV 663
Query: 751 DIGAL-SLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLP 809
IG L S EK+T LG+ + L V + K + +I CL +A RDPF LP
Sbjct: 664 VIGILQSKTEKITPLGKIVAELPVGVQLGKSIVHSIYYRCLGSMTIIAAYHSVRDPFVLP 723
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMN 869
+ +K A+ A SD ++ ++ +E + + Q + FC + V M
Sbjct: 724 VDRTKKSNKQNARHAFAG--NCTSDSMSAVSLYEGFVMCN-KMQLSTFCEENRVCRYAME 780
Query: 870 MLLG----MRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
M + +R ++ N V+ C ++ P +I L AGLYP VA + +K
Sbjct: 781 MFVSAVNCLRDSVRRIFRSNQAGERMVTECDND---PHMIRMALAAGLYPKVAFIDRGNK 837
Query: 926 NGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP--LMVYDEITR-GDGGMHVRNCTVVG 982
N + + G +++ +S LS KK + P ++Y E +R D + N T+V
Sbjct: 838 N---HLVSEGDTCMQISRNSC--LLSRKKLKNLPSDWVLYVEKSRNADQRSSLENNTMVS 892
Query: 983 PLPLLLLATEIAVAPAPDNEDDDED 1007
L L L A D E+ +ED
Sbjct: 893 ALMLAL-----ACGKEGDLEEREED 912
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 189/348 (54%), Gaps = 28/348 (8%)
Query: 53 LSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSVCKSKKRVETDKGKEILPSLTFSEGSKL 112
LS +R+ VH V + MG+ + S G +QR +++ + V+ +G P + S
Sbjct: 95 LSRLQRSHVHRVAQSMGLKTASKGFAEQRVLTITRPAV-VDPQQGVVQKPRIAVS---ST 150
Query: 113 VLQDLFTHYPPDDGEPGEKLDANQSRKSDKTRGKRV------DIFCKPKMSKAEIAMKVE 166
+L+ L D + ++ KSD+ R + + D +P +A+
Sbjct: 151 LLEILAKSSGEMDMNLLRRCSMHRRPKSDRERERELERECERDYLNRPNNGLVGVALVPP 210
Query: 167 SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL 226
R R +V+ER LPI + I + + + QV++I G TG GK+TQ+PQ+LL
Sbjct: 211 PSQCRN------RSLVQERISLPIYRHRSKILNVLQNEQVLIIKGATGSGKSTQLPQYLL 264
Query: 227 EHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFC 286
E ++ ++V +QPRRI+ATSV+ERI+ ERGE+ G +GY+IR+ S+ + + F
Sbjct: 265 EWATNRRRAVRVVVSQPRRIAATSVSERIANERGESQGSTVGYQIRMNSRCSAQTVLTFT 324
Query: 287 TNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS 346
T+G LLR+L G + + +H+++DE+HERD +DF+L + L
Sbjct: 325 TSGCLLRVLAMDGEAFF------------TCTSHLVIDEVHERDLDTDFLLLAAKLELKK 372
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
PHLRLILMSAT+D S YFGG V+ V G ++ VK+F+LE +LSI
Sbjct: 373 NPHLRLILMSATMDLGALSAYFGGATVLDVEGRSFEVKTFHLEKILSI 420
>gi|313230916|emb|CBY18913.1| unnamed protein product [Oikopleura dioica]
Length = 1232
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 220/426 (51%), Gaps = 27/426 (6%)
Query: 531 LDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDT 590
+ +Y +N LID ++EQLL I + GA+LVFLPGW I+ L + F
Sbjct: 538 VTQYFLEMNEALIDFGVVEQLLSYIKSLNVPGAVLVFLPGWASISGLMKHLHNHHIFGGP 597
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ I+PLHS +P Q +VF RP G K+ILSTNIAET+ITIDDV +VIDS ++K K
Sbjct: 598 G-YRILPLHSQIPREDQYQVFVRPSEGVVKVILSTNIAETSITIDDVSFVIDSCKVKMKM 656
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPI 710
+ +NN++ + W S+A+ +QR GRAGR Q G C++L ++ R L + PEI R P+
Sbjct: 657 FTSHNNMTNYATVWASQANIEQRKGRAGRVQEGFCFNLITKERYDRLDEQTTPEILRTPL 716
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
+ L +KLL +I DFL K L+ P + A L+++ AL + ++T LG L
Sbjct: 717 HSIALTIKLLRLG-SIGDFLSKALEVPSLDVVIEAEHTLKELNALDKNSEMTPLGRILAR 775
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPIS--PNEKKRATAAKFELASL 828
L + P + KML D T+A AS + +PF + P + ++ +F
Sbjct: 776 LPLEPRLGKMLILGAAFGIGDCMTTIAAASCFNEPFQIEAKRMPGKHRQYAGDRF----- 830
Query: 829 YGGQSDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD +A++ F+ W ++ G +E +C ++ M + ++QL L G
Sbjct: 831 ----SDHVALLCVFDDWNRIREGGPDREQSWCENKDINMSTMRCIWEAKRQLMEILFNFG 886
Query: 887 F-----IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRL 941
F +P+ +S+ + R+ I +L L P VA H +GR+ + G L
Sbjct: 887 FPEECLVPKAISNNQDDPRLDAAI-TLLAFALAPNVAV----HTDGRKVI--VDGKSALL 939
Query: 942 HPHSLN 947
H HS N
Sbjct: 940 HKHSAN 945
Score = 189 bits (481), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 144/238 (60%), Gaps = 25/238 (10%)
Query: 161 IAMKVESLTSRIEKDANLR------QIVEERSKLPISSFKDVITSTVDSNQVVLISGETG 214
++ +E + + I+ +R I E R LPI + + T+++N V ++ G TG
Sbjct: 323 VSATMEDINADIDGQEQIRISQIDHAIEETRKNLPIFQARQQLLDTINNNTVTIVKGATG 382
Query: 215 CGKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIR 272
GKTTQ+PQ++LE +G C ++ TQPR+ISA S+A+RIS ER E G + GY +R
Sbjct: 383 SGKTTQLPQYILEQALEAKRGGECNVIVTQPRKISAVSIADRISKERSEEQGQSCGYSVR 442
Query: 273 LESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDR 331
ES + H SI+ CT GVLLR L S + ++H++VDEIHERD
Sbjct: 443 FESVFPRSHGSIMLCTVGVLLRKLES----------------GLRGVSHVVVDEIHERDL 486
Query: 332 YSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLE 389
SDF+L ++RD+ +P++R+ILMSAT+D FS+YFG PV++V G T+PV ++LE
Sbjct: 487 NSDFLLVVLRDIYAEFPNVRIILMSATIDTTAFSEYFGNAPVVEVTGRTFPVTQYFLE 544
>gi|293354934|ref|XP_225959.5| PREDICTED: YTH domain containing 2 [Rattus norvegicus]
Length = 394
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 197/352 (55%), Gaps = 27/352 (7%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 45 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 104
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K K ET + + + +K ++ L +P + E E L +
Sbjct: 105 TV-KKKDGSETAHA---MMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 153
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + ++ + R LP+ ++ I +
Sbjct: 154 RGNVFAVEAENREMSKT--SGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 211
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 212 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 271
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 272 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 318
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI
Sbjct: 319 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 370
>gi|340059438|emb|CCC53822.1| putative RNA helicase, fragment, partial [Trypanosoma vivax Y486]
Length = 1252
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 154/497 (30%), Positives = 251/497 (50%), Gaps = 65/497 (13%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE---DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
L +N ELI+L+++ +D++ GA+L+FLPG +I D+L +NP R
Sbjct: 664 LDVINYELIELIVLH-------IDTQMLIPGAVLIFLPGMAEIVHCMDQLKSNP--RLAG 714
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
V+ LHS + S Q VF+RPP G RK+++ TNI ET+ITIDD V+V+D G++KE Y
Sbjct: 715 SCVLYNLHSSLGSSDQHGVFQRPPKGKRKVVIGTNIMETSITIDDAVFVVDCGKVKENRY 774
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
DP ++S L + SKA+ +QR GRAGR + G C+ L++ L D Q+ E+ R+P+E
Sbjct: 775 DPKKSLSQLVTVNTSKANCRQRQGRAGRVRDGYCFRLFTSAHYEKLDDHQLCEMHRVPLE 834
Query: 712 ELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCL 771
L LQ+ L+ +E +L+K L PP +R+++ VL +GA++ D+ +T LG+ + L
Sbjct: 835 GLILQIYSLNLGDEME-YLRKALSPPEECAVRSSVKVLTTLGAITHDKHLTSLGQHMSNL 893
Query: 772 SVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEK----KRATAAKFELAS 827
+ +SKM+ ++ C DP LT+A R PF + +RA A +
Sbjct: 894 PLDVRISKMVIHGAILQCADPVLTIAACLGVRSPFLSSFEYQTEVEGVRRALAGQ----- 948
Query: 828 LYGGQSDQLAVIAAFECW-----KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTEL 882
SD L + A+ W KN G + C +Y++S + + ++Q + L
Sbjct: 949 ---NVSDHLVLWFAYAKWASVQYKNGVSEGNK--LCEKYYLSLPSLRQIQVTKQQYERYL 1003
Query: 883 IKNGFIPED---------------------VSSC----SHNARVPGIIHAVLMAGLYPMV 917
+ G I + SC + N+ I A ++AGLYP +
Sbjct: 1004 YEAGLIEDKPTQNAPNCFLYNPVVTLDDHLYESCGAHLNTNSGDIKCILACIVAGLYPNI 1063
Query: 918 ARLRPPH----KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
AR++ + R + T G++V +HP S+ K +K PL+VY + +
Sbjct: 1064 ARVKTIFDGRGEGKRSKITTHDGSEVLVHPSSVAGK---EKAFASPLLVYVDKVK-TSTT 1119
Query: 974 HVRNCTVVGPLPLLLLA 990
+R ++V PL ++
Sbjct: 1120 FLREVSMVTPLQVIFFG 1136
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 139/214 (64%), Gaps = 18/214 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQ 242
R +LP ++ + + N+VV++SGETG GKTTQ+PQ+L E + +G + IVCTQ
Sbjct: 398 REQLPAFQAREELRQAISCNRVVVVSGETGSGKTTQIPQYLYEFMCEEGVGSSANIVCTQ 457
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL-VSQGVS 301
PRR++ATSVA R++ ER + +G GY IRLE+ + + I +CT G++LR L V + +
Sbjct: 458 PRRLAATSVASRVAKERDDVVGGVTGYTIRLENCVSRRTQITYCTTGIILRRLQVDKFLG 517
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
R+ +HI+VDEIHER +D +L ++RD++ L+++LMSAT+D+
Sbjct: 518 RV---------------SHIVVDEIHERGVDTDVLLILLRDLIKHRDDLKIVLMSATMDS 562
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
F+QYFGG P+I + G +PV+ F+LED++ ++
Sbjct: 563 VLFAQYFGGAPIISIKGRMFPVQVFHLEDIIPMV 596
>gi|261200281|ref|XP_002626541.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis SLH14081]
gi|239593613|gb|EEQ76194.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis SLH14081]
Length = 1397
Score = 223 bits (567), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 225/424 (53%), Gaps = 34/424 (8%)
Query: 543 IDLVLIEQLLRKICMDSED--GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
I+ LI +R I +D G IL+FLPG +I++ L PF +PLH+
Sbjct: 831 INYDLIAFTVRYIDSQLKDQPGGILIFLPGTMEIDRCLAALNHLPFAHP------LPLHA 884
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ +Q++VF PPG RK+I +TN+AET+ITI+DVV VID+GR+KE YDP +N+ L
Sbjct: 885 SLLPTEQRRVFLPAPPGKRKVIAATNVAETSITIEDVVAVIDTGRVKETRYDPADNMVRL 944
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
+ W S+A+ KQR GRAGR +G CY +Y++ A++ PEI+R+P+E+LCL VK +
Sbjct: 945 EEVWASQAACKQRRGRAGRVSSGTCYKMYTRKAEANMAPRPEPEIRRVPLEQLCLSVKAM 1004
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
++ FL TL PP +V I A+ +L IGAL ++++T LG + + ++K+
Sbjct: 1005 RGIEDVAGFLANTLTPPENVAIEGALELLHRIGALD-NQQLTALGRYISMIPTDLRLAKL 1063
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ + + CL+ LT+A + PF +SP +K+ AK AS G D L +A
Sbjct: 1064 MIYGAIFGCLESCLTIAAILTVKSPF---VSPRDKRE--EAKQARASFSTGDGDLLIDLA 1118
Query: 841 AFECW-KNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS 896
A++ W + KQ+G ++W C+ F+ + + + QL + L G IP +
Sbjct: 1119 AYQQWSERVKQQGLWKTQSW-CNDNFLVPKTLREISSNKSQLLSSLKDIGIIPVNYRYAD 1177
Query: 897 HNARVP-----------GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
+A P ++ A++ P +A + P K +F + G + L P +
Sbjct: 1178 ESASTPPNRWNTHNSNTQLLRALIAGAFNPQIANISFPDK---KFAPSVSGT-IELDPDA 1233
Query: 946 LNFK 949
K
Sbjct: 1234 RTIK 1237
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 142/223 (63%), Gaps = 21/223 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
++++ R LP + ++ I V S+QV ++SGETG GK+TQ QF+L+ + + G
Sbjct: 580 QKMLRARRSLPAWAMQEAIIHAVHSHQVTIVSGETGSGKSTQSVQFILDDMIKRDFGSAV 639
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER +GD +GY +R +SK ++ I F T GVLLR +
Sbjct: 640 NIVCTQPRRISALGLADRVSDERCSTVGDEVGYVVRGDSKVKYGTTKITFMTTGVLLRRM 699
Query: 296 VSQGVSRLKEASNKPAKDDVSAL---THIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
+ G +D VS+L +H++VDE+HER +DF+LA++RD+L L+L
Sbjct: 700 QTGG------------QDVVSSLADISHVVVDEVHERSLDTDFLLALLRDVLRRRKDLKL 747
Query: 353 ILMSATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVL 392
ILMSATLDAD F+QYFGG + + G T+PV+ YL+DV+
Sbjct: 748 ILMSATLDADIFTQYFGGGGKVGRVNISGRTFPVEDLYLDDVV 790
>gi|327352500|gb|EGE81357.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis ATCC 18188]
Length = 1368
Score = 223 bits (567), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 225/424 (53%), Gaps = 34/424 (8%)
Query: 543 IDLVLIEQLLRKICMDSED--GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
I+ LI +R I +D G IL+FLPG +I++ L PF +PLH+
Sbjct: 831 INYDLIAFTVRYIDSQLKDQPGGILIFLPGTMEIDRCLAALNHLPFAHP------LPLHA 884
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ +Q++VF PPG RK+I +TN+AET+ITI+DVV VID+GR+KE YDP +N+ L
Sbjct: 885 SLLPTEQRRVFLPAPPGKRKVIAATNVAETSITIEDVVAVIDTGRVKETRYDPADNMVRL 944
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
+ W S+A+ KQR GRAGR +G CY +Y++ A++ PEI+R+P+E+LCL VK +
Sbjct: 945 EEVWASQAACKQRRGRAGRVSSGTCYKMYTRKAEANMAPRPEPEIRRVPLEQLCLSVKAM 1004
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
++ FL TL PP +V I A+ +L IGAL ++++T LG + + ++K+
Sbjct: 1005 RGIEDVAGFLANTLTPPENVAIEGALELLHRIGALD-NQQLTALGRYISMIPTDLRLAKL 1063
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ + + CL+ LT+A + PF +SP +K+ AK AS G D L +A
Sbjct: 1064 MIYGAIFGCLESCLTIAAILTVKSPF---VSPRDKRE--EAKQARASFSTGDGDLLIDLA 1118
Query: 841 AFECW-KNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS 896
A++ W + KQ+G ++W C+ F+ + + + QL + L G IP +
Sbjct: 1119 AYQQWSERVKQQGLWKTQSW-CNDNFLVPKTLREISSNKSQLLSSLKDIGIIPVNYRYAD 1177
Query: 897 HNARVP-----------GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
+A P ++ A++ P +A + P K +F + G + L P +
Sbjct: 1178 ESASTPPNRWNTHNSNTQLLRALIAGAFNPQIANISFPDK---KFAPSVSGT-IELDPDA 1233
Query: 946 LNFK 949
K
Sbjct: 1234 RTIK 1237
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 142/223 (63%), Gaps = 21/223 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
++++ R LP + ++ I V S+QV ++SGETG GK+TQ QF+L+ + + G
Sbjct: 580 QKMLRARRSLPAWAMQEAIIHAVHSHQVTIVSGETGSGKSTQSVQFILDDMIKRDFGSAV 639
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER +GD +GY +R +SK ++ I F T GVLLR +
Sbjct: 640 NIVCTQPRRISALGLADRVSDERCSTVGDEVGYVVRGDSKVKYGTTKITFMTTGVLLRRM 699
Query: 296 VSQGVSRLKEASNKPAKDDVSAL---THIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
+ G +D VS+L +H++VDE+HER +DF+LA++RD+L L+L
Sbjct: 700 QTGG------------QDVVSSLADISHVVVDEVHERSLDTDFLLALLRDVLRRRKDLKL 747
Query: 353 ILMSATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVL 392
ILMSATLDAD F+QYFGG + + G T+PV+ YL+DV+
Sbjct: 748 ILMSATLDADIFTQYFGGGGKVGRVNISGRTFPVEDLYLDDVV 790
>gi|406864997|gb|EKD18040.1| helicase associated domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1393
Score = 223 bits (567), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 225/420 (53%), Gaps = 30/420 (7%)
Query: 543 IDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ LI Q +R+I + +DG IL+F+PG +I+++ D L + P ++PL
Sbjct: 861 INYDLITQTVREIDAELSHLKQDGGILIFMPGVVEISRSIDALRSIP------NLHVLPL 914
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + S Q++VF P G RK++++TN+AET+ITIDD+V VIDSGR+KE SYDP NN+
Sbjct: 915 HASLQSADQRRVFPHAPFGKRKVVVATNVAETSITIDDIVAVIDSGRVKETSYDPQNNMR 974
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQV 717
L+ W S+A+ KQR GRAGR QAG CY LY++ + + PEI+R+P+E+LCL V
Sbjct: 975 KLEEVWASRAACKQRRGRAGRVQAGKCYKLYTRNAEMTKMMERPEPEIRRVPLEQLCLSV 1034
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
+ + + FL L PP S+ + A+ +L +GAL E +T LG L +
Sbjct: 1035 RAMGIK-EVGAFLASALTPPESMAVDGAMDLLGRMGALD-GEDLTALGRHLSMIPADLRC 1092
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ + + CLD +T+A + PF +SP +K+ A + Q D +
Sbjct: 1093 GKLMVYGAMFGCLDACVTIAAILTVKSPF---VSPQDKREEAKAARAKFAR--NQGDLIG 1147
Query: 838 VIAAFECW-----KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+ AFE W + ++G+ +CS ++S +N + R Q + L + FIP
Sbjct: 1148 DLKAFEQWDEMVSNRSIRQGEIRGWCSDNYLSYQTLNDISSNRSQYLSSLRELSFIPNSP 1207
Query: 892 --VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
++S + + ++ ++ P +AR+ P K +F + GA V L P + K
Sbjct: 1208 AALASLNKYSSNTSLLRSLCAGAFNPQIARIDFPDK---KFAASVSGA-VELDPEAKTIK 1263
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 147/227 (64%), Gaps = 11/227 (4%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK 232
+ D L+ +++R LP ++VI TV+S+QV +ISGETG GK+TQ QF+L+ ++
Sbjct: 605 QTDPKLQSRIQQRKTLPAWEMREVIIDTVNSHQVTIISGETGSGKSTQSAQFVLDDLYQN 664
Query: 233 --GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGV 290
G++ KI+CTQPRRISA +A+R+S ER +G +GY IR ESK ++ I F T GV
Sbjct: 665 CLGDSAKIICTQPRRISALGLADRVSEERNSPVGQEVGYIIRGESKTTPNTKITFVTTGV 724
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
LLR L + G S++ ++ ++H+I+DE+HER +DF+L ++RD+L L
Sbjct: 725 LLRRLQTSG------GSSEDVVASLADVSHVIIDEVHERSLDTDFLLVLLRDVLKKRKDL 778
Query: 351 RLILMSATLDADRFSQYF---GGCPVIQVPGFTYPVKSFYLEDVLSI 394
+LILMSATLDA F YF G +++ G TYPV+ +YL+DV+ +
Sbjct: 779 KLILMSATLDAGVFEDYFKANGKVGRVEISGRTYPVEDYYLDDVIQM 825
>gi|239607510|gb|EEQ84497.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis ER-3]
Length = 1397
Score = 222 bits (566), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 225/424 (53%), Gaps = 34/424 (8%)
Query: 543 IDLVLIEQLLRKICMDSED--GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
I+ LI +R I +D G IL+FLPG +I++ L PF +PLH+
Sbjct: 831 INYDLIAFTVRYIDSQLKDQPGGILIFLPGTMEIDRCLAALNHLPFAHP------LPLHA 884
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ +Q++VF PPG RK+I +TN+AET+ITI+DVV VID+GR+KE YDP +N+ L
Sbjct: 885 SLLPTEQRRVFLPAPPGKRKVIAATNVAETSITIEDVVAVIDTGRVKETRYDPADNMVRL 944
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
+ W S+A+ KQR GRAGR +G CY +Y++ A++ PEI+R+P+E+LCL VK +
Sbjct: 945 EEVWASQAACKQRRGRAGRVSSGTCYKMYTRKAEANMAPRPEPEIRRVPLEQLCLSVKAM 1004
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
++ FL TL PP +V I A+ +L IGAL ++++T LG + + ++K+
Sbjct: 1005 RGIEDVAGFLANTLTPPENVAIEGALELLHRIGALD-NQQLTALGRYISMIPTDLRLAKL 1063
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ + + CL+ LT+A + PF +SP +K+ AK AS G D L +A
Sbjct: 1064 MIYGAIFGCLESCLTIAAILTVKSPF---VSPRDKRE--EAKQARASFSTGDGDLLIDLA 1118
Query: 841 AFECW-KNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS 896
A++ W + KQ+G ++W C+ F+ + + + QL + L G IP +
Sbjct: 1119 AYQQWSERVKQQGLWKTQSW-CNDNFLVPKTLREISSNKSQLLSSLKDIGIIPVNYRYAD 1177
Query: 897 HNARVP-----------GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
+A P ++ A++ P +A + P K +F + G + L P +
Sbjct: 1178 ESASTPPNRWNTHNSNTQLLRALIAGAFNPQIANISFPDK---KFAPSVSGT-IELDPDA 1233
Query: 946 LNFK 949
K
Sbjct: 1234 RTIK 1237
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 142/223 (63%), Gaps = 21/223 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
++++ R LP + ++ I V S+QV ++SGETG GK+TQ QF+L+ + + G
Sbjct: 580 QKMLRARRSLPAWAMQEAIIHAVHSHQVTIVSGETGSGKSTQSVQFILDDMIKRDFGSAV 639
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER +GD +GY +R +SK ++ I F T GVLLR +
Sbjct: 640 NIVCTQPRRISALGLADRVSDERCSTVGDEVGYVVRGDSKVKYGTTKITFMTTGVLLRRM 699
Query: 296 VSQGVSRLKEASNKPAKDDVSAL---THIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
+ G +D VS+L +H++VDE+HER +DF+LA++RD+L L+L
Sbjct: 700 QTGG------------QDVVSSLADISHVVVDEVHERSLDTDFLLALLRDVLRRRKDLKL 747
Query: 353 ILMSATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVL 392
ILMSATLDAD F+QYFGG + + G T+PV+ YL+DV+
Sbjct: 748 ILMSATLDADIFTQYFGGGGKVGRVNISGRTFPVEDLYLDDVV 790
>gi|388581617|gb|EIM21925.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 1000
Score = 222 bits (566), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 126/332 (37%), Positives = 193/332 (58%), Gaps = 11/332 (3%)
Query: 559 SEDGAILVFLPGWEDINKTRDRL----LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
+EDG IL+FLPGW++I + L L F D K+ I LHS VP +Q+K+F+
Sbjct: 299 NEDGHILIFLPGWDEIKAVQTILEEQKLYGVDFNDRGKYSIHVLHSSVPVQEQQKIFEPC 358
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
G R+IILSTN+AET++TI DVVYV+D+ R+KEK YD ++S L S+WV K++ QRA
Sbjct: 359 EEGIRRIILSTNVAETSVTIPDVVYVVDAARVKEKRYDAEKHMSQLVSAWVGKSNLNQRA 418
Query: 675 GRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD-PNCNIEDFLQKT 733
GRAGR + G Y + S+ R SL Q E+KR+ + E+ L+VK L+ P +ED L +
Sbjct: 419 GRAGRHREGEYYGVLSKRRYESLAAHQTVEMKRVDLSEVVLRVKALNFPGLEVEDVLAQA 478
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
++PP ++ A+ L IGA++ +++T LG+ L L + + K++ +A CLDPA
Sbjct: 479 IEPPAPERVKLALDRLYLIGAINKKKELTSLGKVLLQLPIEAPIGKLILYATFFRCLDPA 538
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQ 853
L+LA RDPF P+ + A K+ S +SD ++ A+E W G+
Sbjct: 539 LSLAAILTNRDPFVAPLDLRAEANAAKQKW---SQREYKSDPFTILNAYETWWGLHSAGK 595
Query: 854 --EAW-FCSQYFVSSGVMNMLLGMRKQLQTEL 882
+AW F ++ F+S + + +++ L L
Sbjct: 596 HSQAWDFVNENFLSRATLLQIRQVKEHLYKSL 627
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 144/236 (61%), Gaps = 22/236 (9%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCK 237
+I ++R LPI + + + ++++ N + ++ TG GKTTQ+PQ +L+ +G C
Sbjct: 16 KIRQQRGSLPIFTQAEEVVTSINDNMITVLMAATGSGKTTQMPQLILDDAIQHGRGAKCN 75
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGVLLRLLV 296
I+CTQPRRI+A SVA+R++ ERGE +G +GY++R ESK + H SI FCT GV LR +
Sbjct: 76 ILCTQPRRIAAISVAQRVASERGEKLGKRVGYQVRFESKKPEPHGSITFCTTGVFLRRMQ 135
Query: 297 SQGVSRLKEAS--NKPAKDDVSAL---THIIVDEIHERDRYSDFMLAIIRDMLPSYPH-- 349
S L+E++ + KD L TH++VDE+HERD +D L +++ ++
Sbjct: 136 SA----LEESAGDSTEGKDKYGMLDDITHVVVDEVHERDVDTDLTLVVLKRLIADRKARG 191
Query: 350 --LRLILMSATLDADRFSQYFGG------CPVIQVPGFTYPVKSFYLEDVLSILKS 397
L++ILMSAT+D+D F YF PV +PG ++PV ++L+D L +K+
Sbjct: 192 KPLKVILMSATIDSDLFQNYFASVNNDVPAPVADIPGRSFPVTKYFLDDYLEEMKT 247
>gi|115442902|ref|XP_001218258.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188127|gb|EAU29827.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1435
Score = 222 bits (566), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 239/485 (49%), Gaps = 56/485 (11%)
Query: 543 IDLVLIEQLLRKIC----MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI++LL +I M AILVF+PG +I + D +L++P F+ + +++ L
Sbjct: 901 LDYQLIKRLLIQIATVPDMAQYSKAILVFMPGMAEIRRLNDEILSDPTFQ--TGWIVHAL 958
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+GR K +D +S
Sbjct: 959 HSSIASEDQEKAFIVPPEGMRKIVIATNIAETGITIPDITAVIDTGREKTMRFDERRQLS 1018
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L +VS+A+AKQR GRAGR Q GIC+H++++ R L + Q PE+ R+ +++L L+V
Sbjct: 1019 RLVEMFVSRANAKQRRGRAGRVQEGICFHMFTKHRHDKLLAEQQTPEMLRLSLQDLVLRV 1078
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+ +E L + LDPP S IR AI L+++ AL+ E +T LG +L L + +
Sbjct: 1079 KICKLG-EVEHTLLEALDPPSSKNIRRAIDALKEVKALTNSENLTPLGMQLAKLPLDVFL 1137
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ CLD A+++A + PF + N +K F G SD L
Sbjct: 1138 GKLIIHGAFFKCLDAAISIAAILSSKSPFVNTMGSNTQKDLARLSFR-----RGDSDLLT 1192
Query: 838 VIAAFECWKNAKQ--RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-------- 887
V A+ WK + E FC + F+SS + + ++ QL + G
Sbjct: 1193 VYNAYCAWKRTRSTPNVNEYTFCRKNFLSSQTLLNIEDIKMQLVVSIADTGLLKLDPTQK 1252
Query: 888 -----------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
IPE+ S S N I+++V+ YP + + G+ +
Sbjct: 1253 TALNRARSGGRQRQFFTIPEEYDSNSGN---DAIVNSVISWSFYPKLL-----TREGKGW 1304
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPL--MVYDEITRG-DGGMHVRNCTVVGPLPLL 987
A V LHP S+N K++D + + Y I +G + H + V +
Sbjct: 1305 RNVANNQTVTLHPTSVN-----KQSDAATVKWVSYYHIMQGRNRNYHAFETSAVDEFAIA 1359
Query: 988 LLATE 992
LL E
Sbjct: 1360 LLCGE 1364
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 154/245 (62%), Gaps = 20/245 (8%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A+ +++++ R LPI FK I ST+D++ ++I ETG GK+TQ+P F+LEH +G
Sbjct: 634 ASFQRMMQGRMNLPIWDFKQQILSTLDTHHALIICSETGSGKSTQIPSFILEHEMQQGRP 693
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNG 289
CKI T+PRRISA S+A R+S E GE+ D IG+ +RLESK + + +VF T G
Sbjct: 694 CKIYVTEPRRISAISLARRVSEELGESKSDVGTARSLIGFAVRLESKVSQSTRLVFATTG 753
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
V++R+L +P +D +TH+++DE+HER SDF+L ++R ++ P
Sbjct: 754 VVVRML------------ERP--EDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRPD 799
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLI 409
L+L+LMSATL+A RFS Y GG PV+ +PG T+PV++ +LED + + S + +AS
Sbjct: 800 LKLVLMSATLEAQRFSNYLGGVPVLNIPGRTFPVETKFLEDAIELTDYRLSENETNASFD 859
Query: 410 VPNED 414
ED
Sbjct: 860 EDTED 864
>gi|67539338|ref|XP_663443.1| hypothetical protein AN5839.2 [Aspergillus nidulans FGSC A4]
gi|40739158|gb|EAA58348.1| hypothetical protein AN5839.2 [Aspergillus nidulans FGSC A4]
gi|259480002|tpe|CBF70735.1| TPA: ATP dependent RNA helicase, putative (AFU_orthologue;
AFUA_2G07950) [Aspergillus nidulans FGSC A4]
Length = 1436
Score = 222 bits (566), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 259/537 (48%), Gaps = 46/537 (8%)
Query: 439 DMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTA 498
D+ L L+S N ++ T G P++ + G+ + L Q + + +
Sbjct: 798 DLKLILMSATVDANRFS---TYLGGVPVLNIPGRTFPVETKFLEDAIELTQYRTTENESN 854
Query: 499 LQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKIC-- 556
+ E E+ E +Q + L + KQ + + + +D LI++LL K+
Sbjct: 855 VADDEYEDDAETSQGETTGVAATLENYSKQT--RETIMNFDEYRLDYQLIKKLLMKLATA 912
Query: 557 --MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
M+ AILVFLPG +I + D LL+ P F+ ++I LHS + S +Q+K F P
Sbjct: 913 PEMEYYSKAILVFLPGMAEIRRLNDELLSEPTFQ--HGWIIHALHSSIASDEQEKAFVVP 970
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
P G RKI+++TNIAET ITI D+ VID+G+ K +D +S L +++S+A+AKQR
Sbjct: 971 PDGMRKIVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRR 1030
Query: 675 GRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGR Q GIC+H++++ R + L + Q PE+ R+ +++L L+VK+ +E L +
Sbjct: 1031 GRAGRVQRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLG-EVEPTLLEA 1089
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
LDPP S IR AI L+++ AL+ E +T LG++L L + + K++ CLD A
Sbjct: 1090 LDPPSSKNIRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAA 1149
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQR-- 851
+++A + PF + N +K A F G SD L V A+ WK +
Sbjct: 1150 ISIAAILSCKSPFVNTMGSNAQKEAVRLGFR-----RGDSDLLTVYNAYCAWKRTRSTPG 1204
Query: 852 GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVS------------------ 893
E FC + F+S + + ++ QL + G + D +
Sbjct: 1205 ANEYAFCRKNFLSPQTLLNIEDVKLQLMVSIADAGLVTLDTNQKASLNRARSTRQRHFFT 1264
Query: 894 ---SCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
S N +I +V+ YP + + G+ + A V LHP S+N
Sbjct: 1265 TPPSHDTNNANDTLIQSVIAWSFYPKLL-----TREGKGWRNIANNQSVTLHPTSVN 1316
Score = 196 bits (497), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 146/223 (65%), Gaps = 20/223 (8%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
+ +V+ R +LPI +FK+ I +T++S++ ++I ETG GK+TQ+P F+LEH G CK
Sbjct: 635 FQYMVQSRMQLPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGRPCK 694
Query: 238 IVCTQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGVL 291
I T+PRRISA S+A R+S E GE+ D IG+ +RLESK + +VF T GV+
Sbjct: 695 IYVTEPRRISAISLARRVSEELGESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVV 754
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
+R+L +P DD +TH+++DE+HER SDF+L ++R ++ L+
Sbjct: 755 VRML------------ERP--DDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQDLK 800
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
LILMSAT+DA+RFS Y GG PV+ +PG T+PV++ +LED + +
Sbjct: 801 LILMSATVDANRFSTYLGGVPVLNIPGRTFPVETKFLEDAIEL 843
>gi|19112717|ref|NP_595925.1| ATP-dependent RNA/DNA helicase (predicted) [Schizosaccharomyces pombe
972h-]
gi|74676041|sp|O60114.1|YG65_SCHPO RecName: Full=Uncharacterized helicase C15C4.05
gi|3116148|emb|CAA18896.1| ATP-dependent RNA/DNA helicase (predicted) [Schizosaccharomyces
pombe]
Length = 1428
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 264/536 (49%), Gaps = 44/536 (8%)
Query: 442 LELVSLEGSPNVYNYQHTLTGLTPLMVLAGKG----RVGDVCMLLSLGADCQLKAKDGRT 497
L+++ + + N +Q G + L+ + GK R +L G D G+
Sbjct: 784 LKIIIMSATLNAEKFQLYFEG-SNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQD 842
Query: 498 ALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICM 557
++ + E + A I K E+A+ + ++ A N + I+ LI LL+ I
Sbjct: 843 VIEEDDYETDQQDASISNKSAEDAIVE------MNLIPAWYNEKAINYGLIVYLLKYIFT 896
Query: 558 DSE---DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
+ + +LVFLPG +I + + + P FR+ KF I LHS + S QQ+ VF P
Sbjct: 897 EGDPKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIP 956
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
P GCRKI+LSTNIAET +TI DV VID+G +E Y+ ++S L ++VSKA+AKQR+
Sbjct: 957 PKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRS 1016
Query: 675 GRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGR Q GICYHL+S+ + +Q PEI R+ ++E+ L+VK+ +++D L K
Sbjct: 1017 GRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMG-DVQDVLGKA 1075
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
LDPP S I A+ L +GALS +EK+T+LG+ L L V + K+L C+D A
Sbjct: 1076 LDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAA 1135
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN---AKQ 850
++ PF + + + A A+ A +SD + + A+ W+ +
Sbjct: 1136 SSIVAMLTIGSPFRKSV--DNEFSANKARLSFAK-ENTRSDLVLMYYAYCAWREICLSPL 1192
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDVSSCSHNAR--------V 901
E F + +++ ++M ++ QL +EL + DV +C R +
Sbjct: 1193 GPDEDSFAKEKYLNLEALSMTESLKIQLLSELKDMKLLGASDVDTCKSLKRSICRRFAVI 1252
Query: 902 PG----------IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
P I+ V+ A LYP + R R++ + +VR+ S+N
Sbjct: 1253 PKEHDINSGNAEILCGVIAASLYPNILRY---DYEKRQWSTLSTNKRVRILDVSVN 1305
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 168/287 (58%), Gaps = 34/287 (11%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R++LP + F++ I V+++Q+++ISG+TGCGK+TQ+P FLLE+ G+ KI T+PR
Sbjct: 628 RNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENSTKNGKAVKIYVTEPR 687
Query: 245 RISATSVAERISVERGEN-----IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
RISA S+A R+S E G N + +GY +RL+SK + + + T G LRLL
Sbjct: 688 RISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLL---- 743
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
E N ++ ++TH+I+DE+HER SD +L + +L +PHL++I+MSATL
Sbjct: 744 -----EVGN-----EIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATL 793
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTE 419
+A++F YF G +I +PG TYPV FYLED+LS + +S + ++ +D E +
Sbjct: 794 NAEKFQLYFEGSNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQ 853
Query: 420 E-----NKSTLDEAISL----AWSNDE------FDMLLELVSLEGSP 451
+ NKS D + + AW N++ LL+ + EG P
Sbjct: 854 QDASISNKSAEDAIVEMNLIPAWYNEKAINYGLIVYLLKYIFTEGDP 900
>gi|357615068|gb|EHJ69451.1| putative ATP-dependent RNA helicase [Danaus plexippus]
Length = 486
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 224/423 (52%), Gaps = 57/423 (13%)
Query: 610 VFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKAS 669
VF++P G RKI+LSTNIAET++TIDD V+V+D GRMKEK +D N+ +L WVS+A+
Sbjct: 2 VFQKPRDGARKIVLSTNIAETSVTIDDCVFVVDCGRMKEKRFDSNRNMESLDLVWVSRAN 61
Query: 670 AKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEELCLQVKLLD--PNCNI 726
AKQR GRAGR AG+C HL++ R L + VPEI R+P+E+L L++K+L N +
Sbjct: 62 AKQRKGRAGRVMAGVCIHLFTSHRYNYHLSEQPVPEIHRVPLEQLVLKLKILPLFRNMGV 121
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
+ L KT++PP+ I A+I LQD+GAL +T LG+ L L V + K++ F +
Sbjct: 122 HEVLGKTIEPPLKSNIDGALIRLQDVGALDKMYALTALGKHLAALPVDVRIGKLMLFGAI 181
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
C+D ALT+A ++ PF P +K A A + E A SDQL + A+ W+
Sbjct: 182 FCCVDSALTMAAFLSHKSPFLAPFG--KKSEADAKRREFAC---SNSDQLTTLRAYRKWQ 236
Query: 847 NA-KQRGQEAW-FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP--------------- 889
A KQ A F ++ F+S + ML ++ QL L GF+P
Sbjct: 237 QALKQSTHSALVFANENFLSHKTLVMLADIKHQLLGLLASIGFVPDMPGLRKKMYKDSVQ 296
Query: 890 ----EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVR----- 940
E+++ N ++ A+L A LYP V ++ P K+ F GGA R
Sbjct: 297 ALTGEELNCNGTNDKLLA---AILCAALYPNVVKVLTPEKS---FHMQIGGAIQRQPNPD 350
Query: 941 -------------LHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLL 987
LHP S+N + + + P +VY E + + VR C++V LPL+
Sbjct: 351 ELKFKTKSDGYVVLHPSSVNSNVGYFTS---PYLVYQEKVK-TTRVFVRECSMVPQLPLV 406
Query: 988 LLA 990
L +
Sbjct: 407 LFS 409
>gi|358055507|dbj|GAA98627.1| hypothetical protein E5Q_05314 [Mixia osmundae IAM 14324]
Length = 1385
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 214/375 (57%), Gaps = 17/375 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
ID LIE L+ ++ +D++DGAIL+F+ G +I + + L + T+ +I+PLHS +
Sbjct: 861 IDYGLIEALVSRLLIDTDDGAILIFMTGVAEIARLCELLRST----QTTSTLILPLHSNL 916
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
+ Q +VF PP G RKI+++TNIAET+ITI DVVYVIDSGR+KE ++DP + ++ L
Sbjct: 917 SNSDQGRVFVVPPKGTRKIVVATNIAETSITIPDVVYVIDSGRVKENAFDPQSGLTRLVE 976
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
SKAS+KQR GRAGR QAG CY L+S+ + D +PE+ R P++ + L V +
Sbjct: 977 QMTSKASSKQRRGRAGRVQAGQCYKLFSRYTEQEMADHALPEMLRTPLDSIVLGVMAVRE 1036
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS---LDEKVTELGEKLGCLSVHPLMSK 779
+ + +L + + PP + I A L +GA++ D ++T LG L + V + K
Sbjct: 1037 HVDPRKYLSQAISPPSTAAIDQAWNTLLSLGAITGKGKDARITPLGRHLSLIPVDLKLGK 1096
Query: 780 MLFFAILMDCLDPALT-LACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
ML + C++P +T +AC + P L +P + A A+ A +SD L
Sbjct: 1097 MLVLGSIFRCIEPVVTGVACLAS--KPLFLN-NPETRDEAQQARQRFAK---ERSDVLTS 1150
Query: 839 IAAFECWKNAKQRGQEAWFCSQYFVS-SGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSH 897
IAAF K K R +CS+ F+S S VM++ + ++++ T L ++G I + +
Sbjct: 1151 IAAFNACKQLKGRSALQRYCSETFISASAVMDIEM-LQREFMTSLEQSGII-SGRNDLNA 1208
Query: 898 NARVPGIIHAVLMAG 912
NA ++ A+L AG
Sbjct: 1209 NAESLNLVKAILFAG 1223
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 136/224 (60%), Gaps = 18/224 (8%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KG 233
A ++++E R KLP S + I V S++V ++ GETG GKTTQVP F+L+ S KG
Sbjct: 604 AAYKKMLESRKKLPAWSMQQDIIDLVTSHRVSIVMGETGSGKTTQVPTFILDKALSTGKG 663
Query: 234 ETCKIVCTQPRRISATSVAERISVERGENIGDN--IGYKIRLESKGGKHSSIVFCTNGVL 291
TC I+ TQPRR+SA SVA R++ ER E I +GY IR E K + ++F T GVL
Sbjct: 664 GTCSIIVTQPRRVSAISVATRVAQERAETINSPHLVGYTIRGERKASPNCRLMFVTTGVL 723
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
LR L +N P ++ ++H++VDE+HER SD +L ++ +L S H++
Sbjct: 724 LRRL-----------ANDP---QLAGVSHVVVDEVHERSLDSDLLLLELKHLLASNKHIK 769
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
++LMSAT+D F+ YF G P I + G YPV+ FYLED L L
Sbjct: 770 IVLMSATVDQALFAGYFNGAPCISLQGLAYPVQDFYLEDYLPTL 813
>gi|195481021|ref|XP_002101481.1| GE15607 [Drosophila yakuba]
gi|194189005|gb|EDX02589.1| GE15607 [Drosophila yakuba]
Length = 980
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 199/368 (54%), Gaps = 11/368 (2%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR-K 620
GA++V+LPG+ D+ RDRL + RD K I+ LHS V + +Q+K F R G R K
Sbjct: 465 GAVIVYLPGYSDMTSLRDRL-ESSLPRDDIK--IMLLHSQVDNNEQRKAF-RIYSGVRLK 520
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
IILSTNI +T+ITI D++YVID+GR K K+YDP + S L SSW+S+A AKQRAGRAGR
Sbjct: 521 IILSTNIGQTSITIPDLLYVIDTGRAKMKTYDPATDASQLTSSWISQADAKQRAGRAGRL 580
Query: 681 QAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSV 740
G CY L+ R + + VPEI R ++E+CL K+ P+ IE FL LDPP
Sbjct: 581 CHGNCYRLFDSYRLKRMDLYTVPEIMRRTLDEICLLTKVAAPDKKIEHFLALALDPPQQD 640
Query: 741 TIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACAS 800
+ A L+ +G L +++T LG + L + K L ++I + CLD + +A
Sbjct: 641 AVMQACSRLKLLGVLDERDEITPLGRIIAELPLGVQFGKCLVYSIYLRCLDSMIIIAAYH 700
Query: 801 DYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQ 860
RDPF L + +K A+ A G SD LA I +E + + K R FC +
Sbjct: 701 SVRDPFVLNMERGKKSGQQNARNSFAG--DGMSDSLAAIKLYEEFTSLK-RMNIGDFCER 757
Query: 861 YFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS--CSHNARVPGIIHAVLMAGLYPMVA 918
FV M M + L+ + + F D S+ S + +I L AGLYP +A
Sbjct: 758 NFVCRNAMEMFVSAVSTLR-DTVYRIFRFNDASARLASSFNKDTNMIRLALTAGLYPKLA 816
Query: 919 RLRPPHKN 926
+ +KN
Sbjct: 817 YMDRENKN 824
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 126/215 (58%), Gaps = 12/215 (5%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
R I +ER LPI ++ I S + QV++I G TG GK+TQ+PQ++LE +I
Sbjct: 204 RNIQQERQSLPIYKQRENILSVLQQEQVLIIKGATGSGKSTQLPQYILEWAAEHRTPVRI 263
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
V +QPRRI+A SV+ERIS ERGE G +GY+IR+ + + + T+G LLR L
Sbjct: 264 VVSQPRRIAAISVSERISKERGEAPGGTVGYQIRMNRQCSSQTVLTLTTSGCLLRALAMD 323
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
S K TH+I+DE+HERD +DF+L + L PHLRL+LMSAT
Sbjct: 324 NESFFKNT------------THLIIDEVHERDLDTDFLLLATKLELQKNPHLRLVLMSAT 371
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLS 393
+D S YFG V+ V G ++ V ++LED+LS
Sbjct: 372 MDLKALSDYFGRATVMDVEGRSFGVAIYHLEDILS 406
>gi|336374069|gb|EGO02407.1| hypothetical protein SERLA73DRAFT_120997 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386987|gb|EGO28133.1| hypothetical protein SERLADRAFT_367686 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1344
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/508 (30%), Positives = 259/508 (50%), Gaps = 52/508 (10%)
Query: 522 LSDSMKQQLLDKYLATV----NPELIDLVLIEQLLRKICMDSE-DGAILVFLPGWEDINK 576
LS+ + L D+ ++T+ + + ID LI L+ I ++ G ILVFL G ++I +
Sbjct: 784 LSNLKTRGLGDQDISTIRSITHADRIDYELIASLINHIMSSAKVKGGILVFLSGVQEIRQ 843
Query: 577 TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
+ + + + + + PLH+ + + +Q+ VFK P K+I +TN+AE +ITIDD
Sbjct: 844 CIEAVRKS---VNNGEADVFPLHANLSNDEQRAVFK--PTSKWKVIAATNVAEASITIDD 898
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
VVYVIDSG+ KE YD +++ L+ W+S+A+AKQR GRAGR Q G Y LY++ +
Sbjct: 899 VVYVIDSGKAKETMYDAESSLWKLEEIWISRAAAKQRRGRAGRTQPGKYYALYTKKQQEK 958
Query: 697 LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS 756
+ +QVPEI R+P+E + L+VK+ N +I+ FL + +DPP + A VL+++GA+
Sbjct: 959 MASYQVPEILRVPLETISLKVKVTRENEDIKFFLSRAIDPPPVAAMEKAWSVLKELGAVD 1018
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
+++T LG + L + ++KML + CLDP LT+ A + F P+ E+
Sbjct: 1019 EADRLTALGRHISVLPMDLRLAKMLILGTIFQCLDPILTVVAALSSKSLFFSPMDDREQA 1078
Query: 817 RATAAKFELASLYGGQSDQLAVIAAF-ECWK---NAKQRGQEAWFCSQYFVSSGVMNMLL 872
KF + SD + + A+ EC + K + FC + ++S + +
Sbjct: 1079 EKAKLKFNTHN-----SDFITDVNAYNECMRLRSEGKSQNSMKLFCEENYISPTTIREIS 1133
Query: 873 GMRKQLQTELIKNGFIP-------EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
+R + L GF+P D++S S N V I A+++ GL+P VAR+ P K
Sbjct: 1134 TLRLDFFSSLCDLGFVPLSSNAKSPDLNSNSTNTNV---IKAIILGGLWPRVARVELP-K 1189
Query: 926 NGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+ +F + G +V LHP S+ F + K+ P + Y +
Sbjct: 1190 SAIKFDKVQAGTVQRENTAKEYRVYDSRDGRVFLHPSSVLFGTTAWKS---PFIAYFQKQ 1246
Query: 968 RGDGGMHVRNCTVVGPLPLLLLATEIAV 995
R + +R + V LLL +V
Sbjct: 1247 R-TSKVFLRGASEVPVYALLLFGGAFSV 1273
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 152/261 (58%), Gaps = 31/261 (11%)
Query: 137 SRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDV 196
SR+S + R R D ++I E+L K ++ R +LP + KD
Sbjct: 533 SRRSVRGRDGRTD---------SQIRTDFEALC----KSPKYSELFVARQRLPAFAVKDR 579
Query: 197 ITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKIVCTQPRRISATSVAER 254
+ + ++V+++ G+TGCGKTTQ+PQF+L+ + ++G I+ TQPRR++A SVA R
Sbjct: 580 FLTELQKSRVMVVVGDTGCGKTTQLPQFILDSLIMSNRGSKASIIVTQPRRLAAISVATR 639
Query: 255 ISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDD 314
+S ER ++ +GY R ESK K + ++FCT GV LR L S D
Sbjct: 640 VSAERLDD--GCVGYATRGESKQSKKTKLLFCTTGVTLRRLSS--------------GDK 683
Query: 315 VSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVI 374
+ +TH+IVDE+HER DF+L ++++L ++P L++ILMSAT++ + F +YF P++
Sbjct: 684 LEDVTHVIVDEVHERSVDGDFLLLELKELLLTHPSLKVILMSATINHEAFVKYFNNAPML 743
Query: 375 QVPGFTYPVKSFYLEDVLSIL 395
+PGF +PV YLED + +L
Sbjct: 744 TIPGFAHPVTDLYLEDYIPLL 764
>gi|119480561|ref|XP_001260309.1| ATP dependent RNA helicase, putative [Neosartorya fischeri NRRL 181]
gi|119408463|gb|EAW18412.1| ATP dependent RNA helicase, putative [Neosartorya fischeri NRRL 181]
Length = 1453
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 223/437 (51%), Gaps = 48/437 (10%)
Query: 543 IDLVLIEQLLRKIC----MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI+ LL K+ M AILVF+PG +I + D +L++P F+ + +++ L
Sbjct: 913 LDYQLIKNLLVKLASAPEMAPYSRAILVFMPGMAEIRRLNDEILSDPIFQ--TGWIVHAL 970
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 971 HSSIASEDQEKAFVVPPEGMRKIVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLS 1030
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L +++S+A+AKQR GRAGR Q+GIC+HL+++ R L + Q PE+ R+ +++L L+V
Sbjct: 1031 RLVEAFISRANAKQRRGRAGRVQSGICFHLFTKHRHDKLLAEQQTPEMLRLSLQDLVLRV 1090
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+ +E L + LDPP S IR AI L+++ AL+ E +T LG +L L + +
Sbjct: 1091 KICKLG-EVEQTLLEGLDPPSSKNIRRAIDSLKEVKALTNSESLTPLGMQLAKLPLDVFL 1149
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ + CLD +++A + PF + N +K F+ G SD L
Sbjct: 1150 GKLIIHGVFFKCLDACISIAAILSSKSPFVNTMGSNNQKDLARLSFK-----KGDSDLLT 1204
Query: 838 VIAAFECWKNAKQR--GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-------- 887
V A+ W+ + E FC + F+SS + + ++ QL L G
Sbjct: 1205 VYNAYCAWRRTRSTPGANEYAFCRKNFLSSQTLLNIEDIKMQLIVSLADAGLLTLDPTQK 1264
Query: 888 -----------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
IPED + S N V +++V+ YP + + G+ +
Sbjct: 1265 TMLNRARSGGRQRQFFTIPEDYDTNSSNDVV---VNSVIAWSFYPKLL-----TREGKGW 1316
Query: 931 VETAGGAKVRLHPHSLN 947
A V LHP S+N
Sbjct: 1317 RNVANNQSVTLHPTSVN 1333
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 146/224 (65%), Gaps = 20/224 (8%)
Query: 177 NLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETC 236
+ + +V+ R LPI FKD I +T+D+++ ++I ETG GK+TQ+P F+LEH +G C
Sbjct: 647 SFQHMVQGRMNLPIWEFKDEILNTLDTHRALIICSETGSGKSTQIPSFILEHELKQGRPC 706
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNGV 290
KI T+PRRISA S+A R+S E GE+ D IG+ +RLESK + + +VF T GV
Sbjct: 707 KIYVTEPRRISAISLARRVSEELGESKADVGTARSLIGFAVRLESKVSQSTRLVFATTGV 766
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
++R+L +P DD +TH+++DE+HER SDF+L ++R ++ P L
Sbjct: 767 VVRML------------ERP--DDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRPDL 812
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+LILMSATL+A RFS Y GG PV+ +PG T+PV+ +LED + +
Sbjct: 813 KLILMSATLEAQRFSSYLGGVPVLNIPGRTFPVEMKFLEDAIEL 856
>gi|86562256|ref|NP_495890.2| Protein RHA-1 [Caenorhabditis elegans]
gi|3913436|sp|Q22307.3|DHX9_CAEEL RecName: Full=Probable ATP-dependent RNA helicase A; AltName:
Full=Nuclear DNA helicase II; Short=NDH II
gi|77799164|emb|CAA90409.2| Protein RHA-1 [Caenorhabditis elegans]
Length = 1301
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 257/482 (53%), Gaps = 22/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N L+D + L ++ ++ + I +IE +L I DGA+LVFLPGW +I +
Sbjct: 618 NILTDPSINESLKTAMSRISEKDIPFGVIEAILNDIASRGVDGAVLVFLPGWAEIMTLCN 677
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
RLL + F +K+ I+PLHS + S +Q+KVF P G RKII+STNIAET+ITIDDVVY
Sbjct: 678 RLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYP-GKRKIIVSTNIAETSITIDDVVY 736
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VIDS + KE+ Y NN+ + W SK + QR GRAGR +AG +HL S++R +L D
Sbjct: 737 VIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVRAGYAFHLCSKMRFEALDD 796
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
E+ RIP+ ++ L +KLL ++ +FL K L PP + + VLQ +GAL +
Sbjct: 797 HGTAEMLRIPLHQIALTIKLLRLG-SVGEFLGKALQPPPYDMVVESEAVLQAMGALDRNL 855
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRAT 819
++T LG+ L + + P+++K+L + +A A + PF P EK +
Sbjct: 856 ELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPTPFV----PREKHHSR 911
Query: 820 AAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRK 876
+ + SD +A+++ + ++ A Q G A FC +Y +S+ V+ M G R+
Sbjct: 912 LSGTQRKFAGNKFSDHVAIVSVIQGYREAVQMGASAAEREFCERYSLSNPVLKMTDGARR 971
Query: 877 QLQTELIKNGFIPEDV-SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
QL L PED+ S N P ++ ++L+ LYP VA + G+R V
Sbjct: 972 QLIDVLRNQCSFPEDILFDISVNVNGPDRELNLMRSLLVMALYPNVA-----YYVGKRKV 1026
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDD--CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
T + ++ +S+ ++ ++ D PL+V+ E R + + +V+ + LL+
Sbjct: 1027 LTIEQSSALINKYSMLVPMNNRQEMDFPSPLLVFTEKVRTR-CISCKQMSVISAIQLLVF 1085
Query: 990 AT 991
+
Sbjct: 1086 GS 1087
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 159/249 (63%), Gaps = 31/249 (12%)
Query: 163 MKVESLTSRI------EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
M +E ++ RI ++ L +I +R +LP++ +++ I TV N+V LI GETGCG
Sbjct: 350 MSMEQISQRIMEKEDFKRGEALDKITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCG 409
Query: 217 KTTQVPQFLLEHIW--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
K+TQV QFLLE S G + V +QPRRISA S+AER++ ERGE +G+ GY +R +
Sbjct: 410 KSTQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGEEVGETCGYNVRFD 469
Query: 275 SKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
S + + SI+FCT GVLLR++ ++ + ++H+I+DEIHERD +
Sbjct: 470 SATPRPYGSIMFCTVGVLLRMM----------------ENGLRGISHVIIDEIHERDVDT 513
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF------GGCPVIQVPGFTYPVKSFY 387
DF+L ++R+M+ +Y LR++LMSAT+D D F+ +F G PVI + G T+PV+SFY
Sbjct: 514 DFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFY 573
Query: 388 LEDVLSILK 396
LED+L L+
Sbjct: 574 LEDILHNLQ 582
>gi|195401473|ref|XP_002059337.1| GJ18398 [Drosophila virilis]
gi|194142343|gb|EDW58749.1| GJ18398 [Drosophila virilis]
Length = 1362
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 236/439 (53%), Gaps = 24/439 (5%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
GAILVFLPGW I L ++ F D ++ I+P HS +P Q++VF+ P G KI
Sbjct: 657 GAILVFLPGWNLIFALMKFLQSSNNFGDPQQYRILPCHSQIPRDDQRRVFEPVPDGITKI 716
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
ILSTNIAET+ITIDD+V+V+D + + K + +NN+++ + W SK + +QR GRAGR +
Sbjct: 717 ILSTNIAETSITIDDIVFVVDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVR 776
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVT 741
G C+ L S+ R A L + PE+ R P+ E+ L VKLL I FL K L+PP
Sbjct: 777 PGFCFTLCSRARFAQLEENLTPEMFRTPLHEIALTVKLLRLGA-IHHFLSKALEPPPVDA 835
Query: 742 IRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC-AS 800
+ A ++L+D+ L ++++T LG L L V P + KML + C D ++A +S
Sbjct: 836 VIEAEVLLRDMRCLDANDELTPLGRLLARLPVEPRLGKMLVLGAVFGCADLVASMASYSS 895
Query: 801 DYRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRG--QEAWF 857
+ + F L I +++ A K +L G + SD +A+I A + W++AK+RG +EA
Sbjct: 896 TFSEVFALDIG--QRRLANHQK----ALSGRKCSDHVAMIVASQMWQSAKKRGEHEEARV 949
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSH---NARVP--GIIHAVLMAG 912
C + MN++ + QL L + GF PE+ H NA P I A+L G
Sbjct: 950 CDWKGLQMSTMNVMFDAKLQLLDLLQQAGF-PEECMLPHHVNANADDPELDISLALLCLG 1008
Query: 913 LYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
LYP + HK R+ + T A + LH S+N + T P V+ E R
Sbjct: 1009 LYPNIC----VHKEKRKVLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-A 1061
Query: 973 MHVRNCTVVGPLPLLLLAT 991
+ + ++V PL +++ +
Sbjct: 1062 VSCKQLSMVAPLQVMIFGS 1080
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 157/239 (65%), Gaps = 22/239 (9%)
Query: 168 LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE 227
L R + + RQ +E R KLPI++ + I + ++ N VV+I G TGCGKTTQ+ Q++L+
Sbjct: 366 LCERRQNNPEYRQFLEFRDKLPIAAMRSEIMTAINENPVVIIRGNTGCGKTTQIAQYILD 425
Query: 228 HIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIV 284
+ G+ I TQPRRISA SVAER++ ER E +GD +GY +R ES + + +I+
Sbjct: 426 DYITSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAIL 485
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
FCT GVLLR L EA + ++HIIVDEIHERD SDF+L I+RDM+
Sbjct: 486 FCTVGVLLRKL---------EAG-------LRGISHIIVDEIHERDVNSDFLLVILRDMV 529
Query: 345 PSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI---LKSAES 400
+YP L +ILMSAT+D FS+YFG CPV++VPG +PV+ F+LED++ + + SAES
Sbjct: 530 ATYPDLHIILMSATIDTTLFSKYFGDCPVLEVPGRAFPVQQFFLEDIIQMTGFVPSAES 588
>gi|326470725|gb|EGD94734.1| ATP dependent RNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1469
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 219/434 (50%), Gaps = 52/434 (11%)
Query: 547 LIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
LI LL I E AIL+F+PG +I + D +L+ P F++ +VI LHS +
Sbjct: 932 LITDLLSSIASRPEFIDYSKAILIFMPGLAEIRRLHDEILSIPMFQN--GWVIYSLHSSI 989
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
S Q+K F PPPG RK++++TNIAET ITI D+ VID+G+ K +D +S L
Sbjct: 990 ASEDQEKAFVVPPPGMRKVVIATNIAETGITIPDITAVIDTGKEKVMRFDERRQISKLVE 1049
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLD 721
+V++A+AKQR GRAGR Q GIC+HL+S+ R L D Q PE+ R+ +++L L+VK+
Sbjct: 1050 VFVARANAKQRRGRAGRVQEGICFHLFSKYRHDKLLSDQQTPEMLRLSLQDLILRVKI-- 1107
Query: 722 PNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
CN IE L + +DPP S IR AI L+ + AL+ E +T LG++L L + +
Sbjct: 1108 --CNLGDIEGTLSEAMDPPSSKNIRRAIESLKTVKALTGTETLTPLGKQLAKLPLDVFLG 1165
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K++ + C+D A+++A + PF I+ + A+ FE G SD L V
Sbjct: 1166 KLILYGAFFKCVDAAVSIAAILSSKSPFLNDINRKSQIEASRKAFE-----RGNSDLLTV 1220
Query: 839 IAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---------- 888
A+ WK + E FC + +S + + ++ QL + G +
Sbjct: 1221 YNAYCAWKKHRADKNEFSFCRKNHLSPQALLNIEDVKTQLLVSVADTGLLKLNNEDQLAL 1280
Query: 889 ---------------PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVET 933
PE V S+N I+++V+ YP RL H G R V
Sbjct: 1281 NRARYAGRKRQFFVAPEQVDINSNN---DTIVNSVIAWSFYP---RLLTRHGKGWRNV-- 1332
Query: 934 AGGAKVRLHPHSLN 947
+ V LH S+N
Sbjct: 1333 SNNQSVVLHSASVN 1346
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/311 (36%), Positives = 178/311 (57%), Gaps = 35/311 (11%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
+N +++ R+ LPI SF+D + + S+Q ++I GETG GK+TQ+P F+LE+ + G+
Sbjct: 662 SNFQRMATARADLPIWSFRDQVIDALSSHQTIIICGETGSGKSTQIPSFILENELAAGKE 721
Query: 236 CKIVCTQPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNG 289
CKI T+PRRISA S+A R+S E GEN IG N +GY IRLESK + ++F T G
Sbjct: 722 CKIYVTEPRRISAISLARRVSEELGENKNDIGTNRSLVGYAIRLESKFTASTRLIFATTG 781
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
+++R+L +P D ++TH+++DE+HER DF+L ++R +L +
Sbjct: 782 IVIRML------------ERP--QDFDSVTHLVLDEVHERTIDGDFLLIVLRRLLSTRHD 827
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK---SAESNHLDSA 406
L+L+LMSAT+DA RFS Y G P++ +PG YPV++ YLEDV+ + + ++ D
Sbjct: 828 LKLVLMSATVDAKRFSDYLSGAPILNIPGRMYPVETKYLEDVIELTHYRPDKDDSYTDVT 887
Query: 407 SLIVPNEDPELTEEN---KSTLD----EAISLAWSNDEFDMLLELV-----SLEGSPNVY 454
+E P +E+ KSTL + S S DE+ + +L+ S+ P
Sbjct: 888 DDTSEDEKPGASEDTTTLKSTLTNYSRQTQSTVLSFDEYRLNYKLITDLLSSIASRPEFI 947
Query: 455 NYQHTLTGLTP 465
+Y + P
Sbjct: 948 DYSKAILIFMP 958
>gi|308509256|ref|XP_003116811.1| CRE-RHA-1 protein [Caenorhabditis remanei]
gi|308241725|gb|EFO85677.1| CRE-RHA-1 protein [Caenorhabditis remanei]
Length = 1338
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/483 (32%), Positives = 258/483 (53%), Gaps = 23/483 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N L+D + L ++ ++ + I +IE L I DGA+L+FLPGW +I +
Sbjct: 639 NLLTDPSINESLKVAMSRISEKDIPYGVIEATLVDIANRGVDGAVLIFLPGWAEIMSLCN 698
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
RLL + F TSK+ ++PLHS + S +Q+KVF P RKII+STNIAET+ITIDDVVY
Sbjct: 699 RLLEHQEFGQTSKYEVLPLHSQLTSQEQRKVFNHYP-NKRKIIISTNIAETSITIDDVVY 757
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VIDS + KE+ Y NN+ + W SK + QR GRAGR +AG +HL S++R SL +
Sbjct: 758 VIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVRAGYAFHLCSRMRFESLDE 817
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
E+ RIP+ ++ L +KLL ++ DFL K L+PP + + VLQ +GAL +
Sbjct: 818 HGTAEMLRIPLHQIALTIKLLRLG-SVGDFLGKALEPPPYDMVVESEAVLQAMGALDRNL 876
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRAT 819
++T LG+ L + + P+++K+L + +A A + PF P EK +
Sbjct: 877 ELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVAAAMSFPTPFV----PREKHHSR 932
Query: 820 AAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW----FCSQYFVSSGVMNMLLGMR 875
+ + SD +A+++ F+ ++ A Q G A FC ++ VS+ V+ M G R
Sbjct: 933 LSGVQRKFTGNKFSDHVALVSVFQSYREASQMGNSAAIEREFCERFSVSNPVLKMTEGAR 992
Query: 876 KQLQTELIKNGFIPEDV-----SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
+QL L PED+ + + R ++ ++L+ LYP VA + G+R
Sbjct: 993 RQLVDVLRNQCSFPEDILFDVQVNVNGPDRELNLMRSLLVMALYPNVA-----YYTGKRK 1047
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDD--CPLMVYDEITRGDGGMHVRNCTVVGPLPLLL 988
V T + ++ +S+ ++ ++ + PL+V+ E R + + +V+ + LL+
Sbjct: 1048 VLTIEQSSALINKYSVLVPMNNRQEMELPSPLLVFTEKVRTR-CISCKGMSVITAIQLLV 1106
Query: 989 LAT 991
+
Sbjct: 1107 FGS 1109
Score = 189 bits (481), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 160/264 (60%), Gaps = 46/264 (17%)
Query: 163 MKVESLTSRI--EKDANLRQ----IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
M +E ++ RI +++A L + I +R LP++ F+D I TV +N+V LI GETGCG
Sbjct: 357 MTMEQISQRINEKEEAKLGEPLDAINAQRRDLPVAQFRDDIVQTVANNRVTLIKGETGCG 416
Query: 217 KTTQVPQFLLEHIWSKGETCKI--VCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
K+TQV QFLLE K + V +QPRRISA S+AER++ ERGE++G+ GY +R +
Sbjct: 417 KSTQVAQFLLESFIDKKQAAHFNAVVSQPRRISAISLAERVANERGEDVGETCGYNVRFD 476
Query: 275 SKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
+ + + SI+FCT GVLLR++ ++ + ++H+I+DEIHERD +
Sbjct: 477 NATPRPYGSIMFCTVGVLLRMM----------------ENGLRGISHVIIDEIHERDVDT 520
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGC------PVIQVPGFTYPVK--- 384
DF+L ++RDM+ + LR++LMSAT+D + F+ +FG PVI + G T+PV+
Sbjct: 521 DFVLIVLRDMISQFKDLRVVLMSATIDTNLFTNFFGSAPEIGPTPVITMHGRTFPVQGAF 580
Query: 385 ------------SFYLEDVLSILK 396
+FYLED++ L+
Sbjct: 581 ISLFNNTVSSFLAFYLEDIIQNLR 604
>gi|327299958|ref|XP_003234672.1| DEAD/DEAH box helicase [Trichophyton rubrum CBS 118892]
gi|326463566|gb|EGD89019.1| DEAD/DEAH box helicase [Trichophyton rubrum CBS 118892]
Length = 1357
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 214/403 (53%), Gaps = 27/403 (6%)
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
+++E G IL+FLPG +I DR L++ + ++PLH+ + +QK+VF PPP
Sbjct: 842 LENEPGGILIFLPGTMEI----DRCLSS--MKHLHFAHLLPLHASLLPNEQKRVFNPPPP 895
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
G RK+I +TN+AET+ITI+D+V VID+GR+KE Y+P +N+ L+ +W S+A+ KQR GR
Sbjct: 896 GKRKVIAATNVAETSITIEDIVAVIDTGRVKETRYNPVDNIVRLEETWASQAACKQRRGR 955
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDP 736
AGR + G C+ LY++ ++ PEI+R+P+E+LCL VK + N+ DFL TL P
Sbjct: 956 AGRVRNGTCFKLYTRNAEKNMASRPEPEIRRVPLEQLCLSVKAMRGIQNVPDFLANTLTP 1015
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P +V + A+ +L +GAL D+ +T LG L + +K++ + ++ C++ LT+
Sbjct: 1016 PDNVAVGGALHMLHRMGALDNDQ-LTALGRYLSIIPADLRCAKLMVYGVIFGCIEACLTI 1074
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW----KNAKQRG 852
A + PF P E+ AK +S G D L +AA++ W + R
Sbjct: 1075 AAILTVKSPFASPREAREE-----AKEARSSFSNGDGDLLTDLAAYQQWADKIREQGHRK 1129
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV------SSCSHNARVPGIIH 906
+ W C F+ + + R QL L +P D S + + + +I
Sbjct: 1130 AQVW-CRDKFLLPQTLQDISSNRAQLLGSLKDAALLPVDYKDPDCESRWNRHNKNTRLIR 1188
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
A++ P +A + P K +F + G + L P + K
Sbjct: 1189 ALISGAFNPQIASISFPEK---KFASSMTGT-IELDPEARTIK 1227
Score = 182 bits (463), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 163/269 (60%), Gaps = 27/269 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
+++++ R LP +DVI + S+QV +ISGETG GK+TQ QF+L+ + + G +
Sbjct: 584 QKMLKARQALPAWDIQDVILDEIHSHQVTIISGETGSGKSTQCVQFILDDLIRRDLGSSA 643
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER ++GD++GY IR +SK + I F T GVLLR L
Sbjct: 644 NIVCTQPRRISALGLADRVSAERCSSVGDDVGYIIRGDSKSKPGVTKITFMTTGVLLRRL 703
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+ G S ++ ++ ++H+++DE+HER +DF+LA++R+ L L+LILM
Sbjct: 704 QTAGESVVEALAD---------ISHVVLDEVHERGLDTDFLLAVLREALRIRKDLKLILM 754
Query: 356 SATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
SATLDA+ F YFGG + +PG T+PV+ YL+DVL S DS N
Sbjct: 755 SATLDANMFINYFGGDKQVGRVNIPGRTFPVEDIYLDDVL------RSTGFDS------N 802
Query: 413 EDPELTEENKSTLDEAISLAWSNDEFDML 441
E+++E++ +L + I S +D++
Sbjct: 803 TPYEVSDESEQSLGKTIQKLGSGINYDLI 831
>gi|302695247|ref|XP_003037302.1| hypothetical protein SCHCODRAFT_64497 [Schizophyllum commune H4-8]
gi|300110999|gb|EFJ02400.1| hypothetical protein SCHCODRAFT_64497 [Schizophyllum commune H4-8]
Length = 1378
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 271/522 (51%), Gaps = 63/522 (12%)
Query: 515 KKHMENALSDSMKQQLLDKY----LATVNP---------ELIDLVLIEQLLRKICM--DS 559
K ++ENA +QQ DK+ LA V+ E ID +L+ +++ I D
Sbjct: 779 KSNVENA-----RQQERDKWKQRGLADVDALAIQVISENERIDYMLVASVVKHIVRQRDE 833
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
+ IL+FLPG ++I + + + ++ ++PLH+ + + +Q +VF +
Sbjct: 834 QPSGILIFLPGVQEIKQCIEAVQREVSSQEAD---VLPLHANLTNDEQSRVFAQT--NKW 888
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K+I +TN+AET+ITIDDVVYV+DSGR+KE YDP +++ LQ +WV++A+A+QR GRAGR
Sbjct: 889 KVIAATNVAETSITIDDVVYVVDSGRVKETGYDPATDMTRLQETWVTRAAARQRRGRAGR 948
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
+ G CY L+++ R A + F PEI+R+P+E +CL VK + + DFL + PP
Sbjct: 949 TRPGFCYKLFTRDREARMAPFPTPEIQRVPLESVCLAVKAAREHQDPRDFLAGMISPPDV 1008
Query: 740 VTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACA 799
T+ A+ L+++GALS D +T LG + L V ++KML A L CL P LT+A
Sbjct: 1009 ATMDRALATLEELGALSRDGALTALGRNMAILPVDVRLAKMLILAALFRCLGPVLTIAAV 1068
Query: 800 SDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF-ECWK-NAKQRGQEAW- 856
+ F P P+++ A A+ A LYG SD LA + A+ EC + A+ R Q
Sbjct: 1069 LSSKPIFLSP--PDQRNEADEARQRFA-LYG--SDLLASVLAYDECMRLRAEGRSQREIV 1123
Query: 857 -FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCSHNARVPGIIHAVLMA 911
FC Q F+S + + +R + + L GFI P + + + ++ A++++
Sbjct: 1124 DFCKQNFISPTTVRDITTLRLEFHSALGSMGFISPSLPPSAPALNAYSTHTNLLKAIILS 1183
Query: 912 GLYPMVARLRPPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFK 953
GLYP VAR+R P +F A G ++V +HP S+ F +
Sbjct: 1184 GLYPRVARVRAPRA---KFDAVAAGTVQREAAAREFAFFDMHDSRVWIHPSSILFG---E 1237
Query: 954 KTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
P Y + ++VR+ T LLL ++V
Sbjct: 1238 ARWGAPFAAYFG-RQQTSKVYVRDVTEAPTYALLLFGGSVSV 1278
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 142/224 (63%), Gaps = 18/224 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI- 229
R+ + ++++ R +LP KD VD N+VV++ GETG GKTTQ+PQF+L+ +
Sbjct: 558 RMRQSDKFKKLLSTRERLPAFKAKDAFLDLVDKNRVVVVVGETGSGKTTQLPQFILDSLI 617
Query: 230 -WSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTN 288
++G+ IV TQPRR+SA SVA+R+S ER + ++GY IR ES + ++FCT
Sbjct: 618 MTNQGQDASIVITQPRRLSAISVAQRVSAERVND--GSVGYSIRGESTSTPETKLLFCTT 675
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP 348
GV+LR + SQ + + +TH++VDE+HER SDF+L ++D+L
Sbjct: 676 GVILRRMASQ--------------EGLRGVTHVVVDEVHERSIDSDFLLRELKDILAQQG 721
Query: 349 HLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
++++ILMSAT+D +RF QYF G P++ + G +PVK YLED++
Sbjct: 722 NIKVILMSATVDHERFVQYFNGAPLLSISGLAHPVKDLYLEDII 765
>gi|440470339|gb|ELQ39414.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
[Magnaporthe oryzae Y34]
gi|440480353|gb|ELQ61025.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
[Magnaporthe oryzae P131]
Length = 1504
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 200/364 (54%), Gaps = 18/364 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ ID LI QL+ +I D AILVFLPG +I D LL + F+
Sbjct: 937 LAQMDEYKIDFDLIVQLISRIASDPNYQDYSKAILVFLPGIAEIRTLNDLLLGDRSFQQN 996
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + +Q+ F PP G RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 997 --WLVYPLHSTIATEEQEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1054
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R A + D Q PE+ R+
Sbjct: 1055 FDERRQMSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLS 1114
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L K LDPP + IR AI L D+ AL+ E +T LG +L
Sbjct: 1115 LQDLAIRVKICKIG-GIEETLSKALDPPSAKNIRRAIDALIDVRALTQGEDLTPLGNQLA 1173
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD A+T+A + PF P +R+ A L
Sbjct: 1174 RLPLDVFLGKLILLGSIFKCLDMAITVAAILSSKSPFVAPFG----QRSQADTVRLG-FR 1228
Query: 830 GGQSDQLAVIAAFECWKN-----AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L V A+ WK QE FC + F+S + + ++ QL L+
Sbjct: 1229 RGDSDILTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQLLVSLVD 1288
Query: 885 NGFI 888
+ F+
Sbjct: 1289 SKFL 1292
Score = 216 bits (550), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 182/308 (59%), Gaps = 35/308 (11%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ ++ R +LP+ +F++ + S VD +QVV++ GETGCGK+TQVP FLLEH ++G+ CKI
Sbjct: 682 QNMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGKACKI 741
Query: 239 VCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A R+S E GE D +GY IRLE+ + + +VF T G+++
Sbjct: 742 YCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVM 801
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L E SN D+ +TH+++DE+HER SDF+L +++ ++ L++
Sbjct: 802 RML---------EGSN-----DLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKV 847
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
+LMSAT+DADRFS Y G PV+ VPG T+PV+ +LED + + + L+ +
Sbjct: 848 VLMSATVDADRFSNYLDGAPVLNVPGRTFPVQVNFLEDAVELTGYTIDQKVPQERLVEID 907
Query: 413 EDPELTEENKSTLDEAISL-AWSN---------DE----FDMLLELVS-LEGSPNVYNYQ 457
ED E+ E+ S + SL +S DE FD++++L+S + PN +Y
Sbjct: 908 EDAEVEPESSSKTELLKSLKGYSTRTRNTLAQMDEYKIDFDLIVQLISRIASDPNYQDYS 967
Query: 458 HTLTGLTP 465
+ P
Sbjct: 968 KAILVFLP 975
>gi|322704740|gb|EFY96332.1| ATP dependent RNA helicase, putative [Metarhizium anisopliae ARSEF
23]
Length = 1459
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 197/355 (55%), Gaps = 17/355 (4%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
ID LI QL+ +I D AILVFLPG +I D LL +P F +++ PL
Sbjct: 925 IDFDLILQLMVRIASDESLAFYSKAILVFLPGIAEIRTLNDMLLGDPRF--AKDWLVYPL 982
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + + Q+ F PPPG RKI+L+TNIAET ITI DV VID+G+ +E +D +S
Sbjct: 983 HSSIATEDQESAFLVPPPGVRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDEKKQLS 1042
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEELCLQV 717
L +++S+A+AKQR GRAGR Q G+C+H++++ R + D Q PE+ R+ +++L ++V
Sbjct: 1043 RLIDTFISRANAKQRRGRAGRVQNGLCFHMFTKYRHDCIMSDQQTPEMLRLSLQDLAIRV 1102
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+ IE+ L LD P + IR AI L D+ AL+ E++T LG +L L + +
Sbjct: 1103 KICKIG-GIEETLSDALDAPSAKNIRRAIDALVDVRALTTAEELTPLGHQLARLPLDVFL 1161
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ + CLD ++T+A + PF+ P +RA A +A SD L
Sbjct: 1162 GKLILLGTVFKCLDMSITVAAILSSKSPFSAPWG----QRAQADNARMA-FRRADSDLLT 1216
Query: 838 VIAAFECWKNAKQR----GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
+ A+ WK Q G+E FC + F+S + + ++ QL L +GF+
Sbjct: 1217 IYNAYLAWKRVCQANSGGGKEFQFCRKNFLSQQTLANIEDLKGQLLVSLADSGFL 1271
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 149/223 (66%), Gaps = 20/223 (8%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
+ +++ R +LP+ F+ + + VD NQVV++ GETGCGK+TQVP FLLEH S+G CK
Sbjct: 662 FQSMLKFRMQLPMWQFRPQVLAAVDDNQVVIVCGETGCGKSTQVPAFLLEHELSQGRHCK 721
Query: 238 IVCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVL 291
I CT+PRRISA S+A R+S E GEN GD +GY IRLE+ + + +VF T G++
Sbjct: 722 IYCTEPRRISAISLARRVSDELGENKGDLGTNRSLVGYSIRLEANTSRETRLVFATTGIV 781
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
+R+L E SN D+ +TH+I+DE+HER SDF+L +++ +L L+
Sbjct: 782 MRML---------EGSN-----DLREVTHLILDEVHERSIDSDFLLIVLKRLLTKRKDLK 827
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++LMSAT+DA+RFS Y GG P++ VPG T+PV YLEDV+ +
Sbjct: 828 VVLMSATVDAERFSAYLGGAPILNVPGRTFPVDVRYLEDVVEL 870
>gi|327308080|ref|XP_003238731.1| ATP dependent RNA helicase [Trichophyton rubrum CBS 118892]
gi|326458987|gb|EGD84440.1| ATP dependent RNA helicase [Trichophyton rubrum CBS 118892]
Length = 1469
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 152/481 (31%), Positives = 237/481 (49%), Gaps = 59/481 (12%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
++ LI LL I E AIL+F+PG +I + D +L+ P F++ +V+ L
Sbjct: 928 LNYKLITDLLSSIASRPEFIDYSKAILIFMPGLAEIRRLHDEILSIPMFQN--GWVVYSL 985
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PPPG RK++++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 986 HSSIASEDQEKAFVVPPPGMRKVVIATNIAETGITIPDITAVIDTGKEKVMRFDERRQIS 1045
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L +V++A+AKQR GRAGR Q GIC+HL+S+ R L + Q PE+ R+ +++L L+V
Sbjct: 1046 KLVEVFVARANAKQRRGRAGRVQKGICFHLFSKYRHDKLLSEQQTPEMLRLSLQDLILRV 1105
Query: 718 KLLDPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
K+ CN IE L + +DPP S IR AI L+ + AL+ E +T LG++L L +
Sbjct: 1106 KI----CNLGDIEGTLSEAMDPPSSKNIRRAIKSLKTVKALTGTETLTPLGKQLAKLPLD 1161
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ K++ + C+D A+++A + PF ++ + A+ FE G SD
Sbjct: 1162 VFLGKLILYGAFFKCVDAAVSIAAILSSKSPFLNDLNRKSQIEASRKAFE-----QGNSD 1216
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI------ 888
L V A+ WK + E FC + +S + + ++ QL + G +
Sbjct: 1217 LLTVYNAYCAWKKHRADKNEFSFCRKNHLSPQALLNIEDVKTQLLVSVADTGLLKLNNED 1276
Query: 889 -------------------PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
P+ V S+N I+++V+ YP RL H G R
Sbjct: 1277 QLALNRSRYTGRKRQFFIAPKQVDINSNN---DTIVNSVIAWSFYP---RLLTRHGKGWR 1330
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCP--LMVYDEITRGDGGMHVRNCTVVGPLPLL 987
V + V LH S+N K T++ P L Y + +G + + V L +
Sbjct: 1331 NV--SNNQSVVLHSASVN-----KHTENLPKWLSYYHILQSRNGNYNAHETSAVEELAIA 1383
Query: 988 L 988
L
Sbjct: 1384 L 1384
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 147/225 (65%), Gaps = 20/225 (8%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
+N +++ R+ LPI SF+D + + S+Q V++ GETG GK+TQ+P F+LE+ + G+
Sbjct: 662 SNFQRMAAARAGLPIWSFRDQVIDALSSHQTVIVCGETGSGKSTQIPSFILENELAAGKE 721
Query: 236 CKIVCTQPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNG 289
CKI T+PRRISA S+A R+S E GEN IG N +GY IRLESK + ++F T G
Sbjct: 722 CKIYVTEPRRISAISLARRVSEELGENKSDIGTNRSLVGYAIRLESKFTASTRLIFATTG 781
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
+++R+L +P D ++TH+++DE+HER DF+L ++R +L +
Sbjct: 782 IVIRML------------ERP--QDFDSVTHLVLDEVHERTIDGDFLLIVLRRLLNTRHD 827
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
L+L+LMSAT+DA RFS Y G P++ +PG YPV++ YLEDV+ +
Sbjct: 828 LKLVLMSATVDAKRFSDYLNGAPILSIPGRMYPVETKYLEDVIEL 872
>gi|389626359|ref|XP_003710833.1| hypothetical protein MGG_04709 [Magnaporthe oryzae 70-15]
gi|351650362|gb|EHA58221.1| hypothetical protein MGG_04709 [Magnaporthe oryzae 70-15]
Length = 1504
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 200/364 (54%), Gaps = 18/364 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDT 590
LA ++ ID LI QL+ +I D AILVFLPG +I D LL + F+
Sbjct: 937 LAQMDEYKIDFDLIVQLISRIASDPNYQDYSKAILVFLPGIAEIRTLNDLLLGDRSFQQN 996
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+++ PLHS + + +Q+ F PP G RKI+L+TNIAET ITI DV VID+G+ +E
Sbjct: 997 --WLVYPLHSTIATEEQEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHREMR 1054
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIP 709
+D +S L +++S+A+AKQR GRAGR Q G+C+H++++ R A + D Q PE+ R+
Sbjct: 1055 FDERRQMSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLS 1114
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
+++L ++VK+ IE+ L K LDPP + IR AI L D+ AL+ E +T LG +L
Sbjct: 1115 LQDLAIRVKICKIG-GIEETLSKALDPPSAKNIRRAIDALIDVRALTQGEDLTPLGNQLA 1173
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K++ + CLD A+T+A + PF P +R+ A L
Sbjct: 1174 RLPLDVFLGKLILLGSIFKCLDMAITVAAILSSKSPFVAPFG----QRSQADTVRLG-FR 1228
Query: 830 GGQSDQLAVIAAFECWKN-----AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
G SD L V A+ WK QE FC + F+S + + ++ QL L+
Sbjct: 1229 RGDSDILTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQLLVSLVD 1288
Query: 885 NGFI 888
+ F+
Sbjct: 1289 SKFL 1292
Score = 216 bits (550), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 182/308 (59%), Gaps = 35/308 (11%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ ++ R +LP+ +F++ + S VD +QVV++ GETGCGK+TQVP FLLEH ++G+ CKI
Sbjct: 682 QNMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGKACKI 741
Query: 239 VCTQPRRISATSVAERISVERGENIGD------NIGYKIRLESKGGKHSSIVFCTNGVLL 292
CT+PRRISA S+A R+S E GE D +GY IRLE+ + + +VF T G+++
Sbjct: 742 YCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVM 801
Query: 293 RLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
R+L E SN D+ +TH+++DE+HER SDF+L +++ ++ L++
Sbjct: 802 RML---------EGSN-----DLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKV 847
Query: 353 ILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
+LMSAT+DADRFS Y G PV+ VPG T+PV+ +LED + + + L+ +
Sbjct: 848 VLMSATVDADRFSNYLDGAPVLNVPGRTFPVQVNFLEDAVELTGYTIDQKVPQERLVEID 907
Query: 413 EDPELTEENKSTLDEAISL-AWSN---------DE----FDMLLELVS-LEGSPNVYNYQ 457
ED E+ E+ S + SL +S DE FD++++L+S + PN +Y
Sbjct: 908 EDAEVEPESSSKTELLKSLKGYSTRTRNTLAQMDEYKIDFDLIVQLISRIASDPNYQDYS 967
Query: 458 HTLTGLTP 465
+ P
Sbjct: 968 KAILVFLP 975
>gi|121698146|ref|XP_001267729.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|119395871|gb|EAW06303.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 1460
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 223/437 (51%), Gaps = 48/437 (10%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI++LL K+ E AILVF+PG +I + D +L++P F+ + +++ L
Sbjct: 921 LDYQLIKRLLVKLATTPEMIPYSKAILVFMPGMAEIRRLNDEILSDPVFQ--TSWIVHAL 978
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 979 HSSIASEDQEKAFNVPPEGMRKIVIATNIAETGITIPDITAVIDTGKEKSMRFDERRQLS 1038
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L +++S+A+AKQR GRAGR Q+GIC+H++++ + L + Q PE+ R+ +++L L+V
Sbjct: 1039 RLVETFISRANAKQRRGRAGRVQSGICFHMFTKHQHDKLLAEQQTPEMLRLSLQDLVLRV 1098
Query: 718 KLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLM 777
K+ +E L + LDPP S IR AI L+++ AL+ E +T LG +L L + +
Sbjct: 1099 KICKLG-EVEQTLLEALDPPSSKNIRRAIDSLKEVKALTNSESLTPLGMQLAKLPLDVFL 1157
Query: 778 SKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLA 837
K++ CLD +++A + PF I N +K F+ G SD L
Sbjct: 1158 GKLIIHGAFFKCLDACISIAAILSSKSPFVNTIGSNNQKDLARLSFK-----KGDSDLLT 1212
Query: 838 VIAAFECWKNAKQR--GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-------- 887
V A+ WK + E FC + F+SS + + ++ QL L G
Sbjct: 1213 VYNAYCAWKRTRSTPGANEYAFCRKNFLSSQTLLNIEDIKMQLVVSLADAGLLNLDPAQK 1272
Query: 888 -----------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRF 930
+PE+ + S N V +++V+ YP + + G+ +
Sbjct: 1273 TSLNRTRSGGRQRQFFTVPEEYDTNSSNDTV---VNSVIAWSFYPKLL-----TREGKGW 1324
Query: 931 VETAGGAKVRLHPHSLN 947
A V LHP S+N
Sbjct: 1325 RNVANNQSVTLHPTSVN 1341
Score = 206 bits (523), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 178/315 (56%), Gaps = 36/315 (11%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + +++ R LPI FKD I ST+D+++ ++I ETG GK+TQ+P F+LEH +G
Sbjct: 654 APFQHMLQGRMNLPIWDFKDEILSTLDTHRAIIICSETGSGKSTQIPSFILEHELKQGRR 713
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDN------IGYKIRLESKGGKHSSIVFCTNG 289
CKI T+PRRISA S+A R+S E GE+ D IG+ +RLESK + + +VF T G
Sbjct: 714 CKIYVTEPRRISAISLARRVSEELGESKSDVGTPRSLIGFAVRLESKVSQSTRLVFATTG 773
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
V++R+L DD +THI++DE+HER SDF+L ++R ++ P
Sbjct: 774 VVVRML--------------ERSDDFRDITHIVLDEVHERSIDSDFLLIVLRRLMQKRPD 819
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI----LKSAESNHL-D 404
L+LILMSATL+A +FS Y GG PV+ +PG T+PV+ YLED + + L E+N L D
Sbjct: 820 LKLILMSATLEAQKFSSYLGGVPVLNIPGRTFPVEMKYLEDAIELTNYRLSENEANTLVD 879
Query: 405 SASLIVPNEDPE----------LTEENKSTLDEAISLAWSNDEFDMLLE-LVSLEGSPNV 453
VP+E+ E L + +K T + ++ ++ ++ LV L +P +
Sbjct: 880 EDVEDVPSENAEGDTAGGLLATLDQYSKQTRETVLNFDKYRLDYQLIKRLLVKLATTPEM 939
Query: 454 YNYQHTLTGLTPLMV 468
Y + P M
Sbjct: 940 IPYSKAILVFMPGMA 954
>gi|340923810|gb|EGS18713.1| RNA helicase-like protein [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 1400
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 237/488 (48%), Gaps = 50/488 (10%)
Query: 543 IDLVLIEQLLRKICMD----SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
I+ L+ +++R I D + G IL+FLPG +I + + L R ++PL
Sbjct: 856 INYDLLVEVVRTIDSDLTSRNSAGGILIFLPGVAEITRAVNTL------RPLPSLHVLPL 909
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
H+ + + Q++VF PPPG RK+I+STN+AET+ITIDD+V VIDSGR+KE S+DP + +
Sbjct: 910 HASLDTRDQRRVFLPPPPGKRKVIVSTNVAETSITIDDIVAVIDSGRVKETSFDPVSGMR 969
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 718
L+ +W S+A+ KQR GRAGR QAG CY LY++ A + + PEI+R+P+E++CL V+
Sbjct: 970 RLEETWASRAACKQRRGRAGRVQAGWCYKLYTRDAEAKMRERPDPEIRRVPLEQICLAVR 1029
Query: 719 LLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMS 778
+ ++ FL + PP + A+ +LQ +GAL E++T LG++L + +
Sbjct: 1030 AMGIR-DVRGFLARAPTPPEDSAVEGAVTMLQRMGALD-GEELTALGQQLALIPADLRCA 1087
Query: 779 KMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
K++ + + CLD + +A + PF P+ E+ +A +F D +
Sbjct: 1088 KLMVYGAIFGCLDECVCIAAILSTKSPFLAPVEKREEAKAARGRFTRGGTTASDGDLMTD 1147
Query: 839 IAAFECWK-----NAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG------- 886
+ A++ W+ R W C + F+S ++ + R Q L + G
Sbjct: 1148 LRAYQEWEAMMAGGTPPRKVRQW-CEENFLSWATLSDIAATRAQFYEVLREMGLVSSSVP 1206
Query: 887 ---FIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA------ 937
+ SS + PG++ A+ + P + R+ P K +F + GA
Sbjct: 1207 PSSPLSSSSSSTQSSTSSPGLLRALTASAFTPQILRISFPDK---KFATSVSGAVELDPE 1263
Query: 938 ------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLP 985
+V +HP S+ F + Y + R + VR T
Sbjct: 1264 ARTIKYFAKDVGRVFVHPSSVLFDAQGFAGPGAQFLSYFTMVR-TSKIFVRELTPFNAYT 1322
Query: 986 LLLLATEI 993
LLL A I
Sbjct: 1323 LLLFAGSI 1330
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 176/317 (55%), Gaps = 28/317 (8%)
Query: 142 KTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTV 201
K KR F +P + + E L +R+E A ++++ R +LP + + V
Sbjct: 564 KKAAKRRPRFPRPINWTPDPQSRAEWL-ARVETPA-YKKMLAARERLPAWQVQAEVVKAV 621
Query: 202 DSNQVVLISGETGCGKTTQVPQFLLEHIWSKG--ETCKIVCTQPRRISATSVAERISVER 259
NQV +ISGETG GK+TQ QF+L+ +++KG + I+ TQPRRISA +A+R++ ER
Sbjct: 622 TENQVTIISGETGSGKSTQSVQFILDDLYNKGLGKGANIIVTQPRRISALGLADRVAEER 681
Query: 260 GENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALT 319
+G +GY IR E+K + I F T GVLLR L + G R+++ ++ ++
Sbjct: 682 CSQVGQEVGYSIRGETKTSPDTKITFVTTGVLLRRLQTSG-GRVEDVVA-----SLANVS 735
Query: 320 HIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG------CPV 373
HIIVDE+HER +DF+L+IIRD+L L+LILMSATLDA F YF +
Sbjct: 736 HIIVDEVHERSLDTDFLLSIIRDVLRKRKDLKLILMSATLDAASFRDYFTADSSDITVGM 795
Query: 374 IQVPGFTYPVKSFYLEDVLSILKSAESN-----HLDSASLIVPNEDPELTEENKSTLDEA 428
+++ G TYPV+ +YL+DV+ + + SN + D P +P+ + L
Sbjct: 796 VEIAGRTYPVQDYYLDDVIRMTGFSISNRNHDYYYDDDGSSTPPSEPDPVNKTIQKLGAR 855
Query: 429 ISLAWSNDEFDMLLELV 445
I+ +D+L+E+V
Sbjct: 856 IN-------YDLLVEVV 865
>gi|449551285|gb|EMD42249.1| hypothetical protein CERSUDRAFT_110776 [Ceriporiopsis subvermispora
B]
Length = 1253
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 257/479 (53%), Gaps = 47/479 (9%)
Query: 544 DLVLIEQLLRKICMDSED-GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
D+ LI L+ I +E G IL+FLPG ++I + +RL R S ++PLH+ +
Sbjct: 722 DVELIGSLVTHIMSTAEKRGGILIFLPGVQEIRQCVERL------RRISNTKVLPLHANL 775
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
S +Q++VF KI+++TN+AET+ITIDDV+YVIDSGR+KE YDP + ++ L
Sbjct: 776 SSNEQRQVFASHREW--KIVVATNVAETSITIDDVIYVIDSGRVKETQYDPDSGLTRLTE 833
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+A+QR GRAGR QAG CY LY++ + + + F VPEI+R+P+E + L K++
Sbjct: 834 QWVSRAAARQRRGRAGRTQAGTCYKLYTRSQESQMAAFPVPEIRRVPLESVALSAKVI-- 891
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+ +++ FL K +DPP V I +A+ L+++ AL+ D +T LG L L + + KML
Sbjct: 892 HDDVKTFLGKAIDPPDMVAIDHALSTLEELAALAPDGTLTPLGLHLSALPMDLRLGKMLI 951
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
A + C+ P LT+A + F P+ E+ ++F G SD L + AF
Sbjct: 952 LASIFQCVGPVLTIAACLSSKPLFMNPMEKREEANQARSRF-----IHGNSDLLTDLNAF 1006
Query: 843 -ECWK-NAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSS 894
EC + + + Q A FC + F+S + + +R+ + L GFIP D +S
Sbjct: 1007 EECMRLRTEGKSQSAIKNFCDENFISVSTVRDITSLRQDFFSSLSDLGFIPRFAHPDDAS 1066
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGG------------------ 936
+ N+ ++ AV++ GL+P VAR+ P K+ +F + G
Sbjct: 1067 LNTNSGNENLLKAVILGGLWPRVARVHLP-KSAIKFDKIQAGTIQRENTAKEFKIYDLKE 1125
Query: 937 AKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
+V LHP S+ F ++ K+ + Y + + + +R+ T V LL ++ V
Sbjct: 1126 GRVFLHPSSMLFGINTWKSS---FLAYFQ-KQATSKIFLRDATEVPLYGLLFFGGQVTV 1180
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 133/216 (61%), Gaps = 18/216 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK--IVCTQ 242
R++LP S KD S +D +Q V++ GETG GKTTQ+PQF+L+ + G K IV TQ
Sbjct: 482 RNRLPAFSSKDQFLSLLDHHQCVVVVGETGSGKTTQLPQFVLDSLILSGHGSKASIVVTQ 541
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRR+SA VA R+S ER ++ ++GY IR ESK + ++FCT GVLLR L +
Sbjct: 542 PRRLSAIGVAARVSAERLDD--GSVGYAIRGESKQDARTKLLFCTTGVLLRRLAT----- 594
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
D + +TH+IVDE+HER D +L +++++ + L++ILMSAT++ +
Sbjct: 595 ---------GDKLETVTHVIVDEVHERSIDGDILLLELKELMKRHRKLKVILMSATINHE 645
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSA 398
F +YF P++ + G +YPV+ YLED +S L A
Sbjct: 646 TFVKYFDNAPLLSISGLSYPVEDRYLEDYVSDLGYA 681
>gi|154274271|ref|XP_001537987.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415595|gb|EDN10948.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1283
Score = 220 bits (560), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 198/357 (55%), Gaps = 24/357 (6%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI LL I E AILVF+PG +I + D++L+ P F + S +VI L
Sbjct: 901 LDYKLIVSLLLAITTRKEFEQYSKAILVFMPGMAEIRRLSDQILSEPLF-NKSDWVIHAL 959
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 960 HSSIASEDQEKAFHVPPTGVRKIVIATNIAETGITIPDITAVIDTGKEKVMRFDEKRQLS 1019
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L S++++A+AKQR GRAGR Q G+C+HL+++ R L + Q PEI R+ +++L L+V
Sbjct: 1020 KLVESFIARANAKQRRGRAGRVQRGLCFHLFTKFRHDKLLAEQQTPEILRLSLQDLILRV 1079
Query: 718 KLLDPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
K+ CN +E L + +DPP IR AI L+++ AL+ E +T LG L L +
Sbjct: 1080 KI----CNLGEVEQTLSEAIDPPSPKNIRRAIEALKEVKALTNSENLTPLGRLLAKLPLD 1135
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ K++ + CLD A+++A + PF + N ++ F+ G SD
Sbjct: 1136 VFLGKLIIYGAFFKCLDSAVSIAAIVSSKSPFVNTVGSNTQRELAKLAFK-----RGNSD 1190
Query: 835 QLAVIAAFECWKNAKQRG----QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
L V A+ WK + RG E FC + ++SS + + ++ QL T ++ +G
Sbjct: 1191 LLTVYNAYLSWK--RHRGTPGMSEYAFCRKNYLSSQTLQNIEDVKMQLLTSIVDSGL 1245
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 140/223 (62%), Gaps = 20/223 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LPI FKD I T+ S Q ++I ETG GK+TQVP F+LE G CKI T+PR
Sbjct: 644 RKTLPIWQFKDQILDTLASKQAIIICSETGSGKSTQVPSFILEKELLSGRDCKIYVTEPR 703
Query: 245 RISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E GE+ +G N +GY IRLESK + ++F T GV++R+L
Sbjct: 704 RISAMSLAKRLSDELGEDKNAVGTNRSLVGYAIRLESKISSSTRLIFATTGVVVRML--- 760
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
+P D +TH+++DE+HER SDF+L I+R ++ P L+L+LMSAT
Sbjct: 761 ---------ERPR--DFEDITHLVLDEVHERTIDSDFLLIILRRLMQERPDLKLVLMSAT 809
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESN 401
+DA RFS+Y G PV+ +PG T+PV+ YLED + I K +N
Sbjct: 810 VDAARFSKYLNGAPVLDIPGRTFPVEVKYLEDAIEITKHCPNN 852
>gi|302660560|ref|XP_003021958.1| hypothetical protein TRV_03906 [Trichophyton verrucosum HKI 0517]
gi|291185880|gb|EFE41340.1| hypothetical protein TRV_03906 [Trichophyton verrucosum HKI 0517]
Length = 1348
Score = 220 bits (560), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 213/403 (52%), Gaps = 27/403 (6%)
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
+ +E G IL+FLPG +I DR L++ + ++PLH+ + +QK+VF PPP
Sbjct: 842 LGNEPGGILIFLPGTMEI----DRCLSS--MKHLQFAHLLPLHASLLPNEQKRVFNSPPP 895
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
G RK+I +TN+AET+ITI+D+V VID+GR+KE Y+P +N+ L+ +W S+A+ KQR GR
Sbjct: 896 GKRKVIAATNVAETSITIEDIVAVIDTGRVKETRYNPVDNIVRLEETWASQAACKQRRGR 955
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDP 736
AGR + G C+ LY++ ++ PEI+R+P+E+LCL VK + N+ DFL TL P
Sbjct: 956 AGRVRNGTCFKLYTRNAEKNMASRPEPEIRRVPLEQLCLSVKAMRGIQNVPDFLANTLTP 1015
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P +V + A+ +L +GAL D+ +T LG L + +K++ + ++ C++ LT+
Sbjct: 1016 PDNVAVGGALHMLHRMGALDNDQ-LTALGRYLSMIPADLRCAKLMVYGVIFGCIEACLTI 1074
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW----KNAKQRG 852
A + PF P E+ AK +S G D L +AA++ W + R
Sbjct: 1075 AAILTVKSPFASPREAREE-----AKEARSSFSNGDGDLLTDLAAYQQWADKIREQGYRK 1129
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV------SSCSHNARVPGIIH 906
+ W C F+ + + R QL L +P D S + + + +I
Sbjct: 1130 AQVW-CRDKFLLPQTLQDISSNRAQLLGSLKDAALLPVDYKDPDCESRWNRHNKNTHLIR 1188
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
A++ P +A + P K +F + G + L P + K
Sbjct: 1189 ALISGAFNPQIASISFPEK---KFASSMTGT-IELDPEARTIK 1227
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 162/269 (60%), Gaps = 27/269 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
+++++ R LP +D I V S+QV +ISGETG GK+TQ QF+L+ + + G +
Sbjct: 584 QKMLKARQALPAWDIQDAILDEVHSHQVTIISGETGSGKSTQCVQFILDDLIRRDLGSSA 643
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER ++GD++GY IR +SK + I F T GVLLR L
Sbjct: 644 NIVCTQPRRISALGLADRVSAERCSSVGDDVGYIIRGDSKSKPGVTKITFMTTGVLLRRL 703
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+ G S ++ ++ ++H+++DE+HER +DF+LA++R+ L L+LILM
Sbjct: 704 QTAGESVVEALAD---------ISHVVLDEVHERGLDTDFLLAVLREALRIRKDLKLILM 754
Query: 356 SATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
SATLDA+ F YFGG + +PG T+PV+ YL+DVL S DS N
Sbjct: 755 SATLDANMFINYFGGDKQVGTVNIPGRTFPVEDIYLDDVL------RSTGFDS------N 802
Query: 413 EDPELTEENKSTLDEAISLAWSNDEFDML 441
E ++E++ +L +AI S +D++
Sbjct: 803 TPYEGSDESEQSLGKAIQKLGSGINYDLI 831
>gi|343476887|emb|CCD12148.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 834
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 166/267 (62%), Gaps = 7/267 (2%)
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPS 604
L L+ R C S G+IL+FLPGW +I++ + + +D +I LHS +
Sbjct: 547 LGLVRHFHRTSCDTS--GSILIFLPGWSEISRLAKMIRKSELSKD---LFVIKLHSSITV 601
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+Q++ F RPP G RK++LSTNIAE +ITIDD+VYVIDS +E Y+P N+ L +S
Sbjct: 602 EEQRRAFIRPPKGFRKVVLSTNIAEASITIDDIVYVIDSCFTREAIYNPEGNMMHLSTSL 661
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
+SKA+ +QR GRAGRC+ G+C+HL +L LP+FQ P+I + P+EE+CL +K L P
Sbjct: 662 ISKANGRQRCGRAGRCREGVCFHLLPRLTYEMLPEFQTPDILKAPLEEVCLNLKALKPTE 721
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD-EKVTELGEKLGCLSVHPLMSKMLFF 783
D L++ +D P ++ NA+ +L++I AL+ D E++T +G L L +HPL+ +ML
Sbjct: 722 ACVDILRRGMDVPSECSVSNAVTLLKNISALTPDTERLTYVGRSLSRLPLHPLLGRMLIV 781
Query: 784 AILMDCLDPALTLAC-ASDYRDPFTLP 809
A + LDP T+A S PF LP
Sbjct: 782 ASCLGVLDPIATIAAFLSSKGTPFMLP 808
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 195/384 (50%), Gaps = 65/384 (16%)
Query: 42 SKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV-----SVC----KSKK-- 90
SK+E+ F + L+ ER +H+V +K G+T KSSG RRV + C KSKK
Sbjct: 144 SKEEL-VFPSTLTKEERKTIHDVAEKFGLTHKSSG--SSRRVLTVKKTQCPPEPKSKKSL 200
Query: 91 -------RVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGE-KLDANQSRKSDK 142
R + +G + LP+ T E V+ DL TH P GE K+ A + KS
Sbjct: 201 SAKQIMARTKGFQGLQRLPA-TRIESVVEVINDL-TH-PLVKRMIGEIKVFAGAAPKSYP 257
Query: 143 TRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
R + P+ ++T++ KD + E R LP +KDVI V
Sbjct: 258 LTMTRCGLKNIPR----------GTVTAKRVKD-----LKEFRCALPSYKYKDVIVEYVR 302
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
+ V++ISG+TGCGKTTQ+PQ L + + +++CTQPRRISA SVA+R++ ERGE
Sbjct: 303 RSAVLVISGDTGCGKTTQIPQMLYDEEGLFDKNLQVICTQPRRISAISVAQRVAEERGEA 362
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
GD+ GY +R ++ K++ I++ T G+LLR L + D+ ++ +I
Sbjct: 363 CGDSCGYIVRFDNVTSKNTKIIYMTTGILLRRLQTD--------------PDLKGVSCVI 408
Query: 323 VDEIHERD-----RYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF------GGC 371
VDE+HER+ I++ ++LI+MSAT+ ++ YF
Sbjct: 409 VDEVHEREIETDLCLLLLRDLIMKGGKYHGNCMKLIVMSATVQPEKLVSYFSPEMIGSEV 468
Query: 372 PVIQVPGFTYPVKSFYLEDVLSIL 395
PV+ +PG YPV+ +YLED L
Sbjct: 469 PVVMIPGTLYPVREYYLEDAHECL 492
>gi|390335207|ref|XP_783104.3| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Strongylocentrotus purpuratus]
Length = 932
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 215/392 (54%), Gaps = 21/392 (5%)
Query: 540 PELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH 599
P +DLV+ ++++ I GAIL FLPGW+DI D+LL + + + + P+H
Sbjct: 516 PTNVDLVV--EVIKAIDEKKPAGAILCFLPGWQDIKSVYDKLL-RAWDQSRDEHEVYPVH 572
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
S + Q+ +F PP G RK++L+TN+AET+ITI DVVYV+++G KE+ +D VS
Sbjct: 573 SHITVDNQQAMFDIPPVGVRKVVLATNVAETSITIGDVVYVVNTGNHKEERFDSDLGVSC 632
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L W SKA+ QR GRAGR Q G C+HL+ + + FQ EI RIP+E++ +Q K+
Sbjct: 633 LDLHWASKANITQRKGRAGRRQPGECFHLFDEDVYKQMSKFQTAEILRIPLEQIVVQAKV 692
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
+ + E FL + L+PP S + AI +LQD+ L+ E++T LG+K+ C P ++K
Sbjct: 693 HNEAVSAEMFLAQALEPPPSQAVSGAIDLLQDLDILNEKEELTSLGKKISCFGSDPRIAK 752
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
+ F+ + C+DP LT+A + RD F N R K G+SD L +
Sbjct: 753 AIIFSTIFRCVDPILTIAASLCNRDIF----RENLDNRKLIMKKMKEYSGDGESDHLMRV 808
Query: 840 AAFECWKNAKQRGQEAWF--CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSH 897
A ++ W+ ++ G+++ F + +S + + G ++T L+ V +
Sbjct: 809 ALYQGWEEQQKAGRQSAFSYVQSHHLSLLTLQFIRG--NHVETHLV--------VLAPLM 858
Query: 898 NARVPGIIHAVLMAGLYPMVARLR-PPHKNGR 928
NA + I+ AV+ + YP + + R H+ G+
Sbjct: 859 NA-IDVILEAVICSAFYPNLLKARFGKHEKGK 889
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 158/253 (62%), Gaps = 29/253 (11%)
Query: 175 DANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK-- 232
+ ++ +I+++ LPI ++ I S +++NQVV++ GETGCGKTTQ+PQFLL+ W +
Sbjct: 272 NPDIAEIMKKVQTLPILDKREEILSIINANQVVVLCGETGCGKTTQMPQFLLDD-WIRQD 330
Query: 233 -GETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGV 290
G C IV TQPRRIS S AERI++ERGE +G +GY+IRL + + H ++ CT G+
Sbjct: 331 MGSQCNIVITQPRRISTISTAERIALERGEKVGKTVGYQIRLHRRMPESHGCMLVCTTGI 390
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
LL K+ P D++ ++H+IVDE+HERD +DF+L ++++ L +
Sbjct: 391 LL-----------KKLQQNP---DLTGISHVIVDEVHERDVNTDFLLVLLKNALERNTKV 436
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
+LILMSA+++ FS+YF CP+I VPGF YPVK ++L + L+ L + H
Sbjct: 437 KLILMSASINPGLFSKYFDDCPMINVPGFMYPVKEYFLPETLADLDINPNKH-------- 488
Query: 411 PNEDPELTEENKS 423
+ P +ENK+
Sbjct: 489 --KSPLFEQENKT 499
>gi|320037770|gb|EFW19707.1| DEAD/DEAH box helicase [Coccidioides posadasii str. Silveira]
Length = 1362
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 221/422 (52%), Gaps = 33/422 (7%)
Query: 543 IDLVLIEQLLRKICMDSED--GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
I LI +R I +D G IL+FLPG +I DR LA RD S ++PLH+
Sbjct: 829 ISYHLIAATVRHIDAQLQDQPGGILIFLPGTMEI----DRCLAT--MRDFSFAHLLPLHA 882
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ +QK+VF P G RK+I +TN+AET+ITI+DVV VID+GR+KE Y P +N+ L
Sbjct: 883 SLTPNEQKRVFLAAPKGKRKVIAATNVAETSITIEDVVAVIDTGRVKETRYSPADNIVRL 942
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
+ +W S+A+ KQR GRAGR + G CY LY++ ++ PEI+R+P+E+LCL VK +
Sbjct: 943 EETWASQAACKQRRGRAGRVRNGTCYKLYTRNAENNMAPRPAPEIQRVPLEQLCLSVKAM 1002
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
++ FL KTL PP + ++ AI L IGAL D+ +T LG L + +K+
Sbjct: 1003 KGIDDVAGFLAKTLTPPDTAAVKGAIGTLHRIGALDNDQ-LTVLGRYLSIIPADLRCAKL 1061
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ F ++ CL+ L++A + PF P +++ A AA+ AS G D L +
Sbjct: 1062 MVFGVIFGCLEACLSIAAILTAKSPFASP--KDQRDEAKAAR---ASFSTGDGDLLIDMV 1116
Query: 841 AFECW-KNAKQRGQE---AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP------- 889
A++ W + K +G AW C+ F+ + + R QL T L + G +P
Sbjct: 1117 AYQQWSERVKLQGYRRTLAW-CNDNFLVPQTLRDITSNRAQLLTSLKEVGILPVGYRGDG 1175
Query: 890 --EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+ HN ++ A++ P VA + P K RF + G + + P +
Sbjct: 1176 ELSERRWNRHNTNWQ-LLRALIAGAFNPQVASISFPEK---RFAASMTGT-IEVDPEART 1230
Query: 948 FK 949
K
Sbjct: 1231 IK 1232
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 153/255 (60%), Gaps = 27/255 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
++++ R LP + +D I V++ QV +ISGETG GK+TQ QFLL+ + + G T
Sbjct: 579 QKMIIARKCLPAWAMQDAIVQAVNTYQVTIISGETGSGKSTQSVQFLLDDMIRRDLGSTA 638
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER +GD +GY IR +SK + I F T GVLLR
Sbjct: 639 NIVCTQPRRISALGLADRVSAERCSAVGDEVGYIIRGDSKFKSGLTKITFMTTGVLLR-- 696
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
RL+ N A + ++ +TH++VDE+HER +D +LAI+++ L + L+LILM
Sbjct: 697 ------RLQVGGNSLA-ESLADITHVVVDEVHERSLDTDILLAILKEALKARRDLKLILM 749
Query: 356 SATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
SATLD+D F +YFGG + + G T+PV+ Y+ V+ + L+ AS ++ N
Sbjct: 750 SATLDSDLFVRYFGGENQVGRVNIAGRTFPVEDIYIGQVVQL------TDLNQAS-VLSN 802
Query: 413 EDPELTEENKSTLDE 427
D E+ TLDE
Sbjct: 803 WD-----ESPGTLDE 812
>gi|315054793|ref|XP_003176771.1| pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
[Arthroderma gypseum CBS 118893]
gi|311338617|gb|EFQ97819.1| pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
[Arthroderma gypseum CBS 118893]
Length = 1473
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 223/438 (50%), Gaps = 52/438 (11%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
++ LI LL +I E AIL+F+PG +I + D +L+ P F+ S +V+ L
Sbjct: 932 LNYKLITDLLSRIATRPELVEYSKAILIFMPGLAEIRRLHDEILSIPMFQ--SGWVVYSL 989
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RK++++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 990 HSSIASEDQEKAFIVPPHGIRKVVIATNIAETGITIPDITAVIDTGKEKVMRFDERRQIS 1049
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L +V++A+AKQR GRAGR Q GIC+HL+S+ R L D Q+PE+ R+ +++L L+V
Sbjct: 1050 KLVEVFVARANAKQRRGRAGRVQEGICFHLFSKYRHDKLLSDQQMPEMLRLSLQDLILRV 1109
Query: 718 KLLDPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
K+ CN IE L + LDPP S IR AI L+ + AL+ E +T LG++L L +
Sbjct: 1110 KI----CNLGDIEGTLSEALDPPSSKNIRRAIESLKTVKALTGTETLTSLGKQLAKLPLD 1165
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
+ K++ + C+D A+++A + PF ++ + A+ FE G SD
Sbjct: 1166 VFLGKLILYGAFFKCVDAAVSIAAILSSKSPFLNDVNRKSQIEASRKAFE-----RGNSD 1220
Query: 835 QLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI------ 888
L V A+ WK + E FC + +S + + ++ QL ++ G +
Sbjct: 1221 LLTVYNAYCAWKKHRAEKNEFSFCRKNHLSPQALLNIEDVKTQLLVSVVDTGLLKLNNED 1280
Query: 889 -------------------PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
PE + S+N I+++V+ YP RL H G R
Sbjct: 1281 QLALNRARYTGRKRQFFVAPEQLDINSNN---DTIVNSVIAWSFYP---RLLTRHGKGWR 1334
Query: 930 FVETAGGAKVRLHPHSLN 947
V + V LH S+N
Sbjct: 1335 NV--SNNQVVVLHSASVN 1350
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 151/236 (63%), Gaps = 20/236 (8%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
+++L +R +N +++ R+ LPI SF+D + + S+Q ++I GETG GK+TQ+P F
Sbjct: 655 LQALWARRSSSSNFQRMAASRAGLPIWSFRDQVLDALSSHQTIIICGETGSGKSTQIPSF 714
Query: 225 LLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGG 278
+LE+ + G+ CK+ T+PRRISA S+A R+S E GEN IG N +GY IRLESK
Sbjct: 715 ILENELAAGKECKVYVTEPRRISAISLARRVSEELGENKNDIGTNRSLVGYAIRLESKFT 774
Query: 279 KHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLA 338
+ ++F T G+++R+L +P D +TH+++DE+HER DF+L
Sbjct: 775 ASTRLIFATTGIVIRML------------ERP--QDFDNVTHLVLDEVHERTIDGDFLLI 820
Query: 339 IIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++R +L + L+L+LMSAT+DA RFS Y G P++ +PG YPV+ YLEDV+ +
Sbjct: 821 VLRRLLSTRHDLKLVLMSATVDAKRFSDYLNGAPILNIPGRMYPVEIKYLEDVIEL 876
>gi|303314827|ref|XP_003067422.1| hypothetical protein CPC735_018810 [Coccidioides posadasii C735 delta
SOWgp]
gi|240107090|gb|EER25277.1| hypothetical protein CPC735_018810 [Coccidioides posadasii C735 delta
SOWgp]
Length = 1362
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 221/422 (52%), Gaps = 33/422 (7%)
Query: 543 IDLVLIEQLLRKICMDSED--GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
I LI +R I +D G IL+FLPG +I DR LA RD S ++PLH+
Sbjct: 829 ISYHLIAATVRHIDAQLQDQPGGILIFLPGTMEI----DRCLAT--MRDFSFAHLLPLHA 882
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ +QK+VF P G RK+I +TN+AET+ITI+DVV VID+GR+KE Y P +N+ L
Sbjct: 883 SLTPNEQKRVFLAAPKGKRKVIAATNVAETSITIEDVVAVIDTGRVKETRYSPADNIVRL 942
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
+ +W S+A+ KQR GRAGR + G CY LY++ ++ PEI+R+P+E+LCL VK +
Sbjct: 943 EETWASQAACKQRRGRAGRVRNGTCYKLYTRNAENNMAPRPAPEIQRVPLEQLCLSVKAM 1002
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
++ FL KTL PP + ++ AI L IGAL D+ +T LG L + +K+
Sbjct: 1003 KGIDDVAGFLAKTLTPPDTAAVKGAIGTLHRIGALDNDQ-LTVLGRYLSIIPADLRCAKL 1061
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ F ++ CL+ L++A + PF P +++ A AA+ AS G D L +
Sbjct: 1062 MVFGVIFGCLEACLSIAAILTAKSPFASP--KDQRDEAKAAR---ASFSTGDGDLLIDMV 1116
Query: 841 AFECW-KNAKQRGQE---AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP------- 889
A++ W + K +G AW C+ F+ + + R QL T L + G +P
Sbjct: 1117 AYQQWSERVKLQGYRRTLAW-CNDNFLVPQTLRDITSNRAQLLTSLKEVGILPVGYRGDG 1175
Query: 890 --EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+ HN ++ A++ P VA + P K RF + G + + P +
Sbjct: 1176 ELSERRWNRHNTNWQ-LLRALIAGAFNPQVASISFPEK---RFAASMTGT-IEVDPEART 1230
Query: 948 FK 949
K
Sbjct: 1231 IK 1232
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 154/255 (60%), Gaps = 27/255 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
++++ R LP + +D I V++ QV +ISGETG GK+TQ QFLL+ + + G T
Sbjct: 579 QKMIIARKCLPAWAMQDAIVQAVNTYQVTIISGETGSGKSTQSVQFLLDDMIRRDLGSTA 638
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER +GD +GY IR +SK + I F T GVLLR
Sbjct: 639 NIVCTQPRRISALGLADRVSAERCSAVGDEVGYIIRGDSKFKSGLTKITFMTTGVLLR-- 696
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
RL+ N A + ++ +TH++VDE+HER +D +LAI+++ L + L+LILM
Sbjct: 697 ------RLQVGGNSLA-ESLADITHVVVDEVHERSLDTDILLAILKEALKARRDLKLILM 749
Query: 356 SATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
SATLD+D F +YFGG + + G T+PV+ Y++ V+ + L+ AS ++ N
Sbjct: 750 SATLDSDLFVRYFGGENQVGRVNIAGRTFPVEDIYIDQVVQL------TDLNQAS-VLSN 802
Query: 413 EDPELTEENKSTLDE 427
D E+ TLDE
Sbjct: 803 WD-----ESPGTLDE 812
>gi|226289307|gb|EEH44819.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
[Paracoccidioides brasiliensis Pb18]
Length = 1369
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 142/428 (33%), Positives = 231/428 (53%), Gaps = 40/428 (9%)
Query: 543 IDLVLIEQLLRKI--CMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH- 599
I+ LI +R I + + G IL+FLPG +I++ + PF +PLH
Sbjct: 830 INYDLIASTVRYIDSQLQGKPGGILIFLPGTMEIDRCLAAINHLPFAHP------LPLHA 883
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
S++PS +Q++VF PPG RK+I +TN+AET+ITI+DVV VID+GR+KE YDP +N+
Sbjct: 884 SLLPS-EQRRVFIPAPPGKRKVIAATNVAETSITIEDVVAVIDTGRVKETRYDPADNIVR 942
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L+ W S+A+ KQR GRAGR +G CY LY++ A++ PEI+R+P+E+LCL VK
Sbjct: 943 LEEVWASQAACKQRRGRAGRVSSGTCYKLYTRKAEANMAPRPEPEIRRVPLEQLCLSVKA 1002
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
+ ++ FL TL PP +V + AI +L IGAL ++++T LG + + ++K
Sbjct: 1003 MRGIQDVAGFLANTLTPPENVAVEGAIELLHRIGALD-NQELTSLGRYISMIPTDLRLAK 1061
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
++ + + C++ L++A + PF +SP +K+ AK A+ G D L +
Sbjct: 1062 LMIYGAIFGCVESCLSIAAILTVKSPF---VSPRDKRE--QAKQARAAFSSGDGDLLIDL 1116
Query: 840 AAFECW-KNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSS- 894
AA++ W + KQ+G ++W C++ F+ + + R QL + L G +P D +
Sbjct: 1117 AAYQQWSERVKQQGFWKTQSW-CNENFLMPKTLCEISSNRSQLLSSLKDIGILPMDYRTP 1175
Query: 895 -------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRL 941
SHN+ ++ A++ P +A + P K +F + G + L
Sbjct: 1176 DEITTKPSTTNRWNSHNSNTL-LLRALIAGAFNPQIAIISFPEK---KFAASMSGT-IEL 1230
Query: 942 HPHSLNFK 949
P + K
Sbjct: 1231 DPDARTIK 1238
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 143/222 (64%), Gaps = 21/222 (9%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCK 237
++++ R LP ++ I V+S+QV +ISGETG GK+TQ QF+L+ + + G
Sbjct: 580 KMLKARQSLPAWGMQEAIIHAVNSHQVTIISGETGSGKSTQSVQFILDDMIKRDLGSVAN 639
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLV 296
IVCTQPRRISA +A+R+S ER +GD +GY +R +SK S+ I F T G+LLR +
Sbjct: 640 IVCTQPRRISALGLADRVSDERCSTVGDEVGYVVRGDSKLKYGSTKITFMTTGILLRRMH 699
Query: 297 SQGVSRLKEASNKPAKDDVSAL---THIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLI 353
+ G D VS+L +H++VDE+HER +DF+LA++RD+L L+LI
Sbjct: 700 TGG------------PDVVSSLADISHVVVDEVHERSLDTDFLLALLRDVLRHRRDLKLI 747
Query: 354 LMSATLDADRFSQYFGG-CPV--IQVPGFTYPVKSFYLEDVL 392
LMSATLDAD F++YFGG C V + + G T+PVK Y++DV+
Sbjct: 748 LMSATLDADIFTRYFGGDCKVGLVTISGRTFPVKDLYIDDVI 789
>gi|119175321|ref|XP_001239910.1| hypothetical protein CIMG_09531 [Coccidioides immitis RS]
gi|392870104|gb|EAS27263.2| DEAD/DEAH box helicase [Coccidioides immitis RS]
Length = 1362
Score = 219 bits (559), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 222/422 (52%), Gaps = 33/422 (7%)
Query: 543 IDLVLIEQLLRKICMDSED--GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
I LI +R I + +D G IL+FLPG +I DR LA RD S ++PLH+
Sbjct: 829 ISYDLIAATVRHIDAELQDQPGGILIFLPGTMEI----DRCLAT--MRDFSFAHLLPLHA 882
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ +QK+VF P G RK+I +TN+AET+ITI+DVV VID+GR+KE Y P +N+ L
Sbjct: 883 SLTPNEQKRVFSAAPKGKRKVIAATNVAETSITIEDVVAVIDTGRVKETRYSPADNIVRL 942
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 720
+ +W S+A+ +QR GRAGR + G CY LY++ ++ PEI+R+P+E+LCL VK +
Sbjct: 943 EETWASQAACEQRRGRAGRVRNGTCYKLYTRNAENNMASRPAPEIQRVPLEQLCLSVKAM 1002
Query: 721 DPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKM 780
++ FL KTL PP + ++ AI L IGAL D+ +T LG L + +K+
Sbjct: 1003 KGIEDVAGFLAKTLTPPDTAAVKGAIGTLHRIGALDNDQ-LTVLGRYLSIIPADLRCAKL 1061
Query: 781 LFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
+ F ++ CL+ +++A + PF P +++ A AA+ AS G D L +
Sbjct: 1062 MVFGVIFGCLEACVSIAAILTAKSPFASP--KDQRDEAKAAR---ASFSTGDGDLLIDMV 1116
Query: 841 AFECW-KNAKQRGQE---AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIP------- 889
A++ W + K +G AW C+ F+ + + R QL T L + G +P
Sbjct: 1117 AYQQWSERVKLQGYRRTLAW-CNDNFLVPQTLRDITSNRAQLLTSLKEVGILPVGYRGDG 1175
Query: 890 --EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
+ HN ++ A++ P VA + P K RF + G + + P +
Sbjct: 1176 ELSERRWNRHNTNWQ-LLRALIAGAFNPQVASISFPEK---RFAASMTGT-IEVDPEART 1230
Query: 948 FK 949
K
Sbjct: 1231 IK 1232
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 153/254 (60%), Gaps = 27/254 (10%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCK 237
+++ R LP + +D I V++ QV +ISGETG GK+TQ QFLL+ + + G T
Sbjct: 580 KMITARKCLPAWAMQDAIVQAVNTYQVTIISGETGSGKSTQSVQFLLDDMIQRDLGSTAN 639
Query: 238 IVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLV 296
IVCTQPRRISA +A+R+S ER +GD +GY IR +SK + I F T GVLLR
Sbjct: 640 IVCTQPRRISALGLADRVSAERCSAVGDEVGYIIRGDSKFKSGATKITFMTTGVLLR--- 696
Query: 297 SQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMS 356
RL+ N A + ++ +TH++VDE+HER +D +LAI+++ L + L+LILMS
Sbjct: 697 -----RLQVGGNSLA-ESLADITHVVVDEVHERSLDTDILLAILKEALKARRDLKLILMS 750
Query: 357 ATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNE 413
ATLD+D F +YFGG + + G T+PV+ Y++ V+ + L+ AS +V N
Sbjct: 751 ATLDSDLFVRYFGGENQVGRVNIAGRTFPVEDIYIDQVVQL------TDLNQAS-VVSNW 803
Query: 414 DPELTEENKSTLDE 427
D E+ TLDE
Sbjct: 804 D-----ESPGTLDE 812
>gi|156368791|ref|XP_001627875.1| predicted protein [Nematostella vectensis]
gi|156214837|gb|EDO35812.1| predicted protein [Nematostella vectensis]
Length = 803
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 156/226 (69%), Gaps = 19/226 (8%)
Query: 173 EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK 232
+ D + ++E+RS+LP+ ++K I V N+V++I G TGCGKTTQVPQF+L+
Sbjct: 227 QSDPTFKAMLEQRSQLPVFNYKHAILQAVHENRVIIIKGATGCGKTTQVPQFVLDAFLEN 286
Query: 233 GE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNG 289
G+ C IV TQPRRISA SVAER++ ER E +G+++GY +R ++ + H++++FCT G
Sbjct: 287 GQGAECNIVVTQPRRISAVSVAERVAAERSEALGNSVGYSVRFDTILPRSHAAMLFCTVG 346
Query: 290 VLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPH 349
VLLR L ++ + ++H+IVDEIHERD +DF+L +++ M+ +YP
Sbjct: 347 VLLRKL----------------ENGLHGVSHVIVDEIHERDINTDFILVVLQQMILTYPD 390
Query: 350 LRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
LR++LMSAT+D F++YFG CP++++ G ++PV+ +YLEDV+ +L
Sbjct: 391 LRIVLMSATIDTHMFAEYFGNCPIVEIEGRSFPVQEYYLEDVIQML 436
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 182/327 (55%), Gaps = 19/327 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A ++ + LIE LL I GA+L+FLPGW I L +P F T +
Sbjct: 484 MAQLSEREMSFELIEALLNYISGLGIPGAVLIFLPGWNLIFALHKHLKMHPQF-GTPNYR 542
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PLHS +P Q++VF+ P G KIILSTNIAET+ITIDDVV+VIDS + K K + +
Sbjct: 543 LLPLHSQIPREDQRRVFEPVPEGVTKIILSTNIAETSITIDDVVFVIDSVKAKVKLFTSH 602
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W S+ + +QR GRAGR + G +HL S+ RA L + PEI R P+ EL
Sbjct: 603 NNMTNYATVWASQTNMEQRRGRAGRVRPGFAFHLCSRARADRLAEHATPEILRTPLHELA 662
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL +I FL ++PP + ++ +L+D+ AL +E +T LG L L +
Sbjct: 663 LTIKLLKLG-DITAFLNNAIEPPPLDAVVESVAMLKDMEALDTNENLTPLGYMLAKLPIE 721
Query: 775 PLMSKMLFFAIL------------MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAK 822
P + KM+ + C D T+A ++ + +PF +P++++R
Sbjct: 722 PRLGKMVILGCIFQNASYTVSCLPFSCGDAMATIAASTSFPEPFE---TPSDRRRLGWVH 778
Query: 823 FELASLYGGQSDQLAVIAAFECWKNAK 849
+ + SD +A+++AF+ W++A+
Sbjct: 779 KKFSGTR--HSDHIAMLSAFQAWEDAR 803
>gi|198459278|ref|XP_001361331.2| GA11141 [Drosophila pseudoobscura pseudoobscura]
gi|198136635|gb|EAL25909.2| GA11141 [Drosophila pseudoobscura pseudoobscura]
Length = 1318
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 239/457 (52%), Gaps = 23/457 (5%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+ LIE LL I + GAILVFLPGW I L + F + K+ I+P HS +
Sbjct: 634 VSFELIESLLLHIKSKNIPGAILVFLPGWNLIFALMKFLQTSNHF-SSPKYRILPCHSQI 692
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P Q+KVF+ P G KIILSTNIAET+ITIDD+V+VID + + K + +NN+++ +
Sbjct: 693 PRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYAT 752
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W SK + +QR GRAGR + G C+ L S+ R L + PE+ R P+ E+ L +KLL
Sbjct: 753 VWASKTNLEQRKGRAGRVRPGFCFTLCSRARFEVLEENLTPEMFRTPLHEMALTIKLLRL 812
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL K L+PP + A ++L+++ L ++ +T LG L L V P + KM+
Sbjct: 813 GA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDALTPLGRLLARLPVEPRLGKMMV 871
Query: 783 FAILMDCLDPALTLAC-ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIA 840
+ C D ++A +S + + F L I +++ A K +L G + SD +A+I
Sbjct: 872 LGAVFGCADLVASMASYSSTFSEVFALDIG--QRRLANHQK----ALSGRKCSDHVAMIV 925
Query: 841 AFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN 898
A + W+ AK +G +E+ FC + MN++ ++QL L + GF E + N
Sbjct: 926 ASQMWQKAKHKGEQEESRFCEWKGLQLSTMNVMFDAKQQLLDLLQQAGFPEECMIPHQVN 985
Query: 899 ARVPGII----HAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
A V I A+L GLYP + HK R+ + T A + LH S+N +
Sbjct: 986 ANVEDPILDTALALLCLGLYPNIC----VHKEKRKVLTTESKAAL-LHKTSVNCS-NLAV 1039
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
T P V+ E R + + ++V PL L+L +
Sbjct: 1040 TFPYPFFVFGEKIRTR-AVSCKQLSMVAPLQLMLFGS 1075
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 153/231 (66%), Gaps = 19/231 (8%)
Query: 167 SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL 226
S+ R D+ +Q ++ R KLPI++ + I S ++ N VV+I G TGCGKTTQ+ Q++L
Sbjct: 361 SILDRRHNDSEYQQFLDFRDKLPIAAMRSEILSAINDNPVVIIRGNTGCGKTTQIAQYIL 420
Query: 227 EHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSI 283
+ S G+ I TQPRRISA SVAER++ ER E +GD +GY +R ES + + +I
Sbjct: 421 DDYISSGQGGYANIYVTQPRRISAISVAERVARERCEELGDAVGYSVRFESAFPRPYGAI 480
Query: 284 VFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM 343
+FCT GVLLR L EA + ++HIIVDEIHERD SDF+L I+RDM
Sbjct: 481 LFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDFLLVILRDM 524
Query: 344 LPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+ +YP L +ILMSAT+D FS+YFG CPV++VPG +PV+ F+LEDVL +
Sbjct: 525 VATYPELHVILMSATIDTTLFSKYFGNCPVLEVPGRAFPVQQFFLEDVLQM 575
>gi|241953717|ref|XP_002419580.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223642920|emb|CAX43175.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1370
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 225/427 (52%), Gaps = 24/427 (5%)
Query: 536 ATVNPELIDLV--LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+N ELI V I+Q L + +DG+IL+FLPG +I+ T + N + +KF
Sbjct: 795 GNLNYELIAHVTRFIDQKLTQEA--KQDGSILIFLPGVLEISNTIKEI--NKL--NDNKF 848
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+ +PLHS + S +QK +FK PP G RK+++STNIAET+ITI + V VID+G+ K +D
Sbjct: 849 MTLPLHSGLTSAEQKSIFKTPPRGKRKVVVSTNIAETSITIPNCVAVIDTGKSKNLFFDH 908
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
N + L SW S+A +QR GRAGR AG CYHLY++ ++ +PEIKR +E L
Sbjct: 909 KLNTTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENL 968
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
L VK + + N+ +FL LD P ++ A L +IGAL + +T+LG + L
Sbjct: 969 YLVVKSMGIS-NVNEFLSSGLDAPDRSSLDKANQFLHEIGALQ-ENSLTKLGNYISFLPT 1026
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQS 833
P +K+L + CLD LTLA S PF ++ + KF GQ
Sbjct: 1027 DPQSAKLLILGCIFGCLDICLTLAAISSTGSPFINNYEQRDRLKQIQKKFG-----NGQG 1081
Query: 834 DQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV- 892
D +++ A+ + N K + F S+ ++S + + R Q + L++ GF+ +
Sbjct: 1082 DFISMANAYNAYMNNKSKR----FLSENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLD 1137
Query: 893 SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSF 952
SC+ NA +I ++ YP VAR++ P ++ +++ G+ + + P + K
Sbjct: 1138 DSCNKNAENWPLIRGIIAGAFYPQVARIQYPDP---KYFKSSSGS-IEIDPDARQIKFWI 1193
Query: 953 KKTDDCP 959
K + P
Sbjct: 1194 KSHGELP 1200
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 162/265 (61%), Gaps = 18/265 (6%)
Query: 156 MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
+S +I + ES R + +++ +RSKLP + + + + ++S QV LI+GETG
Sbjct: 542 VSDKDIELVKESYKKR-KHSEEFTEMLTQRSKLPAFAKQKSLMTAINSGQVTLITGETGS 600
Query: 216 GKTTQVPQFLLEHIWSKGE-TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
GK+TQV QF+++ ++SKG+ T KI+CTQPRR+SA S+A+RIS ER + +G GY IR E
Sbjct: 601 GKSTQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGE 660
Query: 275 SKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSD 334
+K K++ I F T GVLLR+L S + + + ++ +I++DE+HER +D
Sbjct: 661 NKTSKNTRITFVTTGVLLRMLQSSKKNGV-----------LKSIGYILIDEVHERSVDAD 709
Query: 335 FMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGG-CPVIQVPGFTYPVKSFYLEDVLS 393
F+L ++++++ + P L++IL+SAT+ D F +F + + G TYP++ FYL+ S
Sbjct: 710 FLLILLKEIIKNMPKLKIILLSATISVDTFINFFEKPLTPLHIEGRTYPIQDFYLD---S 766
Query: 394 ILKSAESNHLDS-ASLIVPNEDPEL 417
IL +E +S I P+ D
Sbjct: 767 ILAESEYKFQNSDGEFITPSADSHF 791
>gi|198423925|ref|XP_002127604.1| PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Ciona
intestinalis]
Length = 1243
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 237/456 (51%), Gaps = 35/456 (7%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
L+E +L+ I GA+LVFLPGW I L +P F + + ++PLHS +P
Sbjct: 650 LVEAILKYIGELGVPGAVLVFLPGWNLIFSLMKHLEQHPMFGGPA-YKLLPLHSQIPRED 708
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q KVF PPG KIILSTNIAET+ITI+DVV+VIDS ++K K + +NN++ + W S
Sbjct: 709 QHKVFDAAPPGVTKIILSTNIAETSITINDVVFVIDSCKVKMKMFTSHNNMTNYATVWAS 768
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
+++ +QR GRAGR + G C++L S+ R S+ PEI R + E+ L +KLL +I
Sbjct: 769 QSNLEQRKGRAGRVRPGFCFYLCSKARYESMESHLTPEILRTALHEIALSIKLLKLG-SI 827
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
+FL K L+PP + A +L+ I AL + ++T+LG L L + P + KM+
Sbjct: 828 GEFLSKALEPPPLDAVIEAEHLLRQINALDRNNELTKLGRILAKLPLEPRLGKMIILGCS 887
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIAAFECW 845
D +A AS + +PF + KR + ++ S G + SD +A++A F W
Sbjct: 888 FLIGDAMCIMAAASCFPEPFEM-----YGKRLS---WKHRSFAGERFSDHVALLACFNAW 939
Query: 846 KNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE------DVSSCSH 897
++A+ G E FC VS + M + QL+ LI GF PE ++C
Sbjct: 940 EDARMSGDDSEVRFCEMKQVSMSTLRMTWEAKNQLKQILINEGF-PEVCLEWQTFNNCGP 998
Query: 898 NARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDD 957
++++ I ++L GLYP + +K R+ + + A + H S+N K D
Sbjct: 999 DSKLDVAI-SLLCIGLYPNICI----YKEKRKVICESRAALI--HKSSVNCPFGNK---D 1048
Query: 958 C----PLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
C P V+ E R + + +++ PL L+
Sbjct: 1049 CTFPSPFFVFGEKIRTR-AVSAKLISMINPLQFLMF 1083
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 157/228 (68%), Gaps = 19/228 (8%)
Query: 172 IEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HIW 230
+E + L+Q+++ERS LPI +K + + V N V+++ G+TG GKTTQVPQ++L+ +I
Sbjct: 381 MENNLRLKQMMDERSSLPILDYKHKLLTLVRENNVLVVRGQTGSGKTTQVPQYILDSYIE 440
Query: 231 SKGET-CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTN 288
S + C I+ TQPRRISA SVAER++ ERGE +G++ GY +R ES + H+ I+FCT
Sbjct: 441 SNNASKCNIIVTQPRRISAVSVAERVADERGEELGNSTGYSVRFESVLPRPHAGILFCTV 500
Query: 289 GVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP 348
GVLLR L + + ++HIIVDEIHERD +DF+L ++RD++ ++P
Sbjct: 501 GVLLRKLT----------------NGLRGVSHIIVDEIHERDINTDFLLVVLRDIVVTFP 544
Query: 349 HLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+R+ILMSAT++ F++YF CPV++V G T+PV+ +++ED + +LK
Sbjct: 545 GIRVILMSATVETSMFTEYFNNCPVLEVHGRTHPVQEYFMEDCIEMLK 592
>gi|255732918|ref|XP_002551382.1| hypothetical protein CTRG_05680 [Candida tropicalis MYA-3404]
gi|240131123|gb|EER30684.1| hypothetical protein CTRG_05680 [Candida tropicalis MYA-3404]
Length = 1391
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 225/422 (53%), Gaps = 21/422 (4%)
Query: 536 ATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVI 595
+N ELI L + + +K+ + G+IL+FLPG +I++T ++ ++ F+
Sbjct: 808 GNINYELI-AKLADYIDKKLTQEGNLGSILIFLPGVLEISQTIKQI-----NKENPNFMA 861
Query: 596 IPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYN 655
+PLHS + S +QK +FK PP G RK+++STN+AET+ITI D V VID+G+ K +D
Sbjct: 862 LPLHSGLTSAEQKLIFKTPPKGKRKVVVSTNVAETSITIPDCVAVIDTGKSKNLFFDTKL 921
Query: 656 NVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCL 715
N + L W S+A +QR GR+GR AG+CYHLY++ S+ +PEIKR +E L L
Sbjct: 922 NTTKLIEDWCSQAEVRQRRGRSGRVTAGVCYHLYTKDTFESMKPQPIPEIKRTRLENLYL 981
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHP 775
VK + N+++FL LD P ++ A +L +IGAL D K+T+LG + L P
Sbjct: 982 IVKSMGI-SNVDEFLSSGLDAPDKSSLNKANQILHEIGALQ-DNKLTKLGNYISYLPTDP 1039
Query: 776 LMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQ 835
+K+L + CLD LTL+ S PF +K + F GQ D
Sbjct: 1040 QSAKLLIMGCIFGCLDICLTLSAISSTGSPFINSFEQRDKLKQIQRNFS-----NGQGDF 1094
Query: 836 LAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV-SS 894
+++ A++ + N K R + F + F+S + + R Q + L + GF+P S
Sbjct: 1095 ISMANAYDAYMN-KDRSKR--FLNDNFLSYTTIKDITSTRSQYLSLLTELGFVPRKYQES 1151
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
+ N+ ++ A++ YP +AR++ P ++ +++ G+ V + P + K K
Sbjct: 1152 DNKNSTNWSLVRAIVAGSFYPQIARVQYPDP---KYFKSSSGS-VEIDPDARQIKFWTKN 1207
Query: 955 TD 956
T+
Sbjct: 1208 TE 1209
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 153/232 (65%), Gaps = 14/232 (6%)
Query: 166 ESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFL 225
+S TSR + + ++ +R KLP + K+ + S ++SNQV LI+GETG GK+TQV QF+
Sbjct: 565 QSYTSRTS-SSEYKDMITQRQKLPAFAKKEALVSAINSNQVTLITGETGSGKSTQVVQFI 623
Query: 226 LEHIWSKGE-TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
++ ++SKG+ KI+CTQPRR+SA S+A+RIS ER ++IG GY IR E+K GK++ I
Sbjct: 624 MDDLYSKGDFKTKIICTQPRRLSAISLADRISKERTDSIGQETGYIIRGENKTGKNTRIT 683
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
F T GVLLR+L S + + E + +I++DE+HER +DF+L +++ M+
Sbjct: 684 FVTTGVLLRMLQSSKTNGILE-----------NIGYILIDEVHERSVDADFLLILLKKMM 732
Query: 345 PSYPHLRLILMSATLDADRFSQYFGG-CPVIQVPGFTYPVKSFYLEDVLSIL 395
+P L+++L+SAT+ + F +F + + G T+P++ +YL+++LS L
Sbjct: 733 KGFPKLKIVLLSATISIETFVNFFSKPLTPLHIEGRTFPIEDYYLDNILSSL 784
>gi|422295292|gb|EKU22591.1| helicase domain-containing protein [Nannochloropsis gaditana
CCMP526]
Length = 763
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 206/375 (54%), Gaps = 29/375 (7%)
Query: 543 IDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVII 596
ID LI +LL + E GA+LVF G+++IN+ + A+ + +
Sbjct: 394 IDYQLIVKLLTLLVTIREADDNEVGGAVLVFFSGFQEINELCKLMAAHAVLGNPKRVQAY 453
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
PLHS +PS Q+ VF+R P G KI+++TNIAET+ITIDD+ VIDSGR+KE YD +
Sbjct: 454 PLHSSLPSDAQRAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETH 513
Query: 657 VSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCL 715
+S+L S W S+A+A QRAGRAGR + G C+ LYS+ A +P + +PE+ R P+EEL L
Sbjct: 514 MSSLVSVWTSQAAASQRAGRAGRVREGTCFRLYSKSFMEAQMPKYTLPEMLRTPLEELSL 573
Query: 716 QVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL----SLDEK-----VTELGE 766
+ L+ + DFL + ++PP I A+ L++I AL LD K + LG
Sbjct: 574 TILALELG-SPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEVSYYLMPLGF 632
Query: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826
L L + KML ++ CL+P LT+A Y+ PF+ P ++ AK+ A
Sbjct: 633 HLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFSNPFGMQQEADRAHAKYGSA 692
Query: 827 SLYGGQSDQLAVIAAFECW---KNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
SD +A + A+ W +N R ++ +C++ F+S + + +RK+L+ +LI
Sbjct: 693 -----LSDHIAALEAYNGWAELRNEPYRVRKD-YCTENFLSIATLEQIEALRKELRRQLI 746
Query: 884 KNGF---IPEDVSSC 895
GF P +S C
Sbjct: 747 DIGFGAGEPRKMSRC 761
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 170/279 (60%), Gaps = 22/279 (7%)
Query: 124 DDGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVE 183
+D + G ++ A + K R +R P S+A M + L R+ + R+++
Sbjct: 61 EDIKEGYRVRAIRRAAGGKKRHER-----SPAESEALSRMLKQRL-ERVMETRGYREMLW 114
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVCT 241
R +LPI S ++ + V+ N V+++SG TG GK+TQVPQFLL+H +G I+ T
Sbjct: 115 ARERLPIWSMREEVVRLVEENTVIVLSGATGSGKSTQVPQFLLDHYIEGGRGSQVNILVT 174
Query: 242 QPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVS 301
QPRRISA S+ ER++ ER +G ++GY IRLE++ +++ F T G+LLR
Sbjct: 175 QPRRISAISLCERVAAERCVEVGRDVGYSIRLEARVSDSTALTFVTTGLLLR-------- 226
Query: 302 RLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDA 361
RL+E D+ ++H+++DE+HERD +SDF+L I++++L L+LILMSATL A
Sbjct: 227 RLQE------DPDLQGVSHVVIDEVHERDIHSDFLLIIMQELLERRKGLKLILMSATLQA 280
Query: 362 DRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAES 400
D F +YFG CP + VPG T+PV+ +LED+ + L S +S
Sbjct: 281 DLFQEYFGNCPAVHVPGRTFPVRHVFLEDIEAKLASVKS 319
>gi|340939573|gb|EGS20195.1| hypothetical protein CTHT_0047090 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1499
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 167/550 (30%), Positives = 260/550 (47%), Gaps = 81/550 (14%)
Query: 507 QPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSE-----D 561
+PEV + K + LS + LA ++ I LI QL+ KI D
Sbjct: 880 EPEVDESAKPELLQELSQAGYSARTRNTLAQLDEYQIPYDLIIQLIDKISEDDSPYKMFS 939
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSK--------------------FVIIPLHSM 601
+ILVFLPG +I + DRL+ +D ++ +V+IPLHS
Sbjct: 940 NSILVFLPGIAEIRELHDRLVVFKTHKDEARRRHERMHGDIRLEDNMPDDEWVVIPLHST 999
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+ + Q+K F+ P G RKI+L+TNIAET ITI DV VID+G+ +E +D +S L
Sbjct: 1000 IATEDQEKAFQVLPRGQRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDDRRQLSRLL 1059
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL-PDFQVPEIKRIPIEELCLQVKLL 720
+++S+A+AKQR GRAGR Q G+C+HL+++ R L D Q PE+ R+ +++L ++VK+
Sbjct: 1060 DAFISRANAKQRRGRAGRVQEGVCFHLFTRYRYKHLMNDQQTPEMLRLSLQDLAIRVKM- 1118
Query: 721 DPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD-EKVTELGEKLGCLSVHPL 776
CN IE+ L + LDPP + IR AI L D+ AL+ + E++T LG +L L +
Sbjct: 1119 ---CNLGGIEETLSQALDPPSAKNIRRAIDALVDVRALTANTEELTPLGIQLARLPLDVF 1175
Query: 777 MSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQL 836
+ K++ + CLD A+T+A + PF P ++ +A A+ + G SD L
Sbjct: 1176 LGKLILLGAVFKCLDMAITVAAILSSKSPFQAPFG--QRAQADNARMQFRR---GDSDLL 1230
Query: 837 AVIAAFECWKNAKQR--GQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF------- 887
A+ WK Q E FC + F+S + + ++ QL + +GF
Sbjct: 1231 TAYNAYTAWKRVCQTPGASEYQFCRKNFLSEQALASIEDLKGQLLVAVADSGFLQLTSEE 1290
Query: 888 -------------------IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGR 928
+P+ V S N V +V+ YP + +R + G
Sbjct: 1291 RQALNRLRFSGRRRNQWYEVPKRVDVNSDNEVV---AQSVIAWSFYPKLL-VRDGNSKGL 1346
Query: 929 RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPL---MVYDEITRGDGGMHVR--NCTVVGP 983
R V + +HP S+N K + PL + Y I + R T V P
Sbjct: 1347 RNV--GNNKPITIHPTSVNHP---SKRGEAPLLRWLSYYNIMQSKSAYDARAHETTAVDP 1401
Query: 984 LPLLLLATEI 993
++LL ++
Sbjct: 1402 FAIVLLCGDV 1411
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 144/262 (54%), Gaps = 52/262 (19%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCK 237
++++E R +LP+ K + + V+ QVV
Sbjct: 682 FQKMLEYRKELPMWKAKQDVVNIVEREQVV------------------------------ 711
Query: 238 IVCTQPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVL 291
I+C +PRRISA S+A R+S E GE+ +G N +GY IRLE+K + + +V+ T G++
Sbjct: 712 IIC-EPRRISAISLARRVSEELGEDKHDLGTNRSLVGYSIRLEAKVARETRLVYATTGIV 770
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
+R+L E SN D+ +TH+++DE+HER SDF+L +++ +L L+
Sbjct: 771 MRML---------EGSN-----DLQEITHLVLDEVHERTIDSDFLLVVLKKLLARRKDLK 816
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK-SAESNHLDSASLIV 410
+ILMSAT+DA++FS YFGG PV+ VPG T+PVK YLED + + + +L + I
Sbjct: 817 VILMSATVDAEKFSNYFGGAPVLSVPGRTFPVKDLYLEDAVEYTGYTVDEQNLGGITEID 876
Query: 411 PNEDPELTEENKSTLDEAISLA 432
+ +PE+ E K L + +S A
Sbjct: 877 DDAEPEVDESAKPELLQELSQA 898
>gi|195119908|ref|XP_002004471.1| GI19596 [Drosophila mojavensis]
gi|193909539|gb|EDW08406.1| GI19596 [Drosophila mojavensis]
Length = 1351
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 157/236 (66%), Gaps = 22/236 (9%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
R + +A RQ +E R KLPI++ + I ++ N VV+I G TGCGKTTQ+ Q++L+
Sbjct: 362 RRQNNAEYRQFLEFREKLPIAAMRSEIMLAINENPVVIIRGNTGCGKTTQIAQYILDDYI 421
Query: 231 SKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
S G+ I TQPRRISA SVAER++ ER EN+G+ +GY +R ES + + +I+FCT
Sbjct: 422 STGQGGYANIYVTQPRRISAISVAERVARERCENLGETVGYSVRFESVFPRPYGAILFCT 481
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
GVLLR L EA + ++HIIVDEIHERD SDF+L I+RDM+ +Y
Sbjct: 482 VGVLLRKL---------EAG-------LRGISHIIVDEIHERDVNSDFLLVILRDMVATY 525
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI---LKSAES 400
P L +ILMSAT+D FS+YFG CPV++VPG +PV+ F+LED++ + + SAES
Sbjct: 526 PDLHIILMSATIDTTLFSKYFGDCPVLEVPGRAFPVQQFFLEDIIQMTGFVPSAES 581
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 224/438 (51%), Gaps = 52/438 (11%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
GAILVFLPGW I L ++ F S++ I+P HS +P Q+KVF+ P G KI
Sbjct: 650 GAILVFLPGWNLIFALMKFLQSSTNF-GNSQYRILPCHSQIPRDDQRKVFEPVPDGVTKI 708
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
ILSTNIAET+ITIDD+V+VID + + K + +NN+++ + W SK + +QR GRAGR +
Sbjct: 709 ILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVR 768
Query: 682 AGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVT 741
G C+ L S+ R A L + PEI ++P PPV
Sbjct: 769 PGFCFTLCSRARFAQLEENLTPEI--------------MEP-------------PPVDAV 801
Query: 742 IRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC-AS 800
I A ++L+++ L ++++T LG L L + P + KML + C D ++A +S
Sbjct: 802 IE-AEVLLREMRCLDANDQLTPLGRLLARLPIEPRLGKMLVLGAVFGCADLVASMASYSS 860
Query: 801 DYRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRG--QEAWF 857
+ + F L I ++R A + +L G + SD +A+I A + W++AK RG +EA F
Sbjct: 861 TFSEVFALDIG---QRRLAAHQ---KALSGRKCSDHVAMIVASQMWQSAKNRGEQEEARF 914
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGF-----IPEDVSSCSHNARVPGIIHAVLMAG 912
C + MN++ + QL L++ GF +P V + + + + I A+L G
Sbjct: 915 CDWKGLQLSTMNVMYDAKMQLLDLLVQAGFPEECMLPHKVDANADDPEL-DISLALLCLG 973
Query: 913 LYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGG 972
LYP + HK R+ + T A + LH S+N + T P V+ E R
Sbjct: 974 LYPNIC----VHKEKRKVLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-A 1026
Query: 973 MHVRNCTVVGPLPLLLLA 990
+ + ++V PL +++
Sbjct: 1027 VSCKQLSMVSPLQVMIFG 1044
>gi|325185453|emb|CCA19937.1| ATPdependent RNA helicase putative [Albugo laibachii Nc14]
Length = 1404
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 176/579 (30%), Positives = 266/579 (45%), Gaps = 114/579 (19%)
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLL---ANPFFRDTSKFVIIPLHSMVPSVQQKKVFKR 613
++ GAIL+FLPG +I + D LL +P +D ++PLH + Q VF+
Sbjct: 868 LEYSGGAILIFLPGQSEIKRMMDILLDTAESPLHKD---IWVVPLHGNLSPRDQAMVFQT 924
Query: 614 PPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQR 673
PP G K+I+STN+AET+IT++DV VIDSG++KE SYD S L SKAS +QR
Sbjct: 925 PPQGRVKVIVSTNVAETSITVNDVTVVIDSGKVKEMSYDCQQRRSKLTQCSTSKASCQQR 984
Query: 674 AGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD-PNCNIEDFLQK 732
GRAGR QAG C+ ++S+ L EI R ++++CLQ+K L P +I FL
Sbjct: 985 QGRAGRVQAGYCFRIFSKAHFEQLEPQISAEIHRTSLQQVCLQIKALGFP--SIRTFLMN 1042
Query: 733 TLDPPVSVTIRNAIIVLQDIGALSLDE--------KVTELGEKLGCLSVHPLMSKMLFFA 784
++PP S I +AI L +IGAL L E ++T LG+ LG L + + K L +
Sbjct: 1043 AIEPPQSEAIDSAIGELIEIGALDLSETSQDSDTVELTPLGKHLGMLPLDARIGKFLIYG 1102
Query: 785 ILMDCLDPALTLACASDYRDPFTLPI-SPNEKKRATAAKFELASLYGG---QSDQL---A 837
++ C+ ++T+A + PF +P+ +++ EL GG +SD L
Sbjct: 1103 SILGCVSASVTIAACISSKSPFCSSAGNPSLQEKHQ----ELKRSVGGDNWKSDHLLHRM 1158
Query: 838 VIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE-DVSSCS 896
V+ + A Q Q+ FC +Y VS + + +R+Q L GF + D +
Sbjct: 1159 VVERYLGLSKATQ-SQKRSFCREYAVSFEALEAITSLRQQYLMHLETIGFYSQKDRHRYN 1217
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA------------------- 937
NA VP II A L AGLY V ++ P K ++ +TA G
Sbjct: 1218 INATVPRIIKAALCAGLYGNVVQVYYPRK---KYTQTAHGVLTEEPEANQVRYFVSTKRH 1274
Query: 938 -----------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPL 986
+V LHP S NFK S + P ++Y E+ + R+ T++ P L
Sbjct: 1275 QHTQPDQKQLERVYLHPSSCNFKQS---NFESPWILYTELIQTSRSF-ARDTTMINPFAL 1330
Query: 987 LLLATEIAVAPAPDNEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKS 1046
LL ++ V QH NV+
Sbjct: 1331 LLFGGKLDV--------------------------------------QHSTNVL------ 1346
Query: 1047 VTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHP 1085
V+D W++F + A I +R++L + K+ +P
Sbjct: 1347 ---VIDDWIHFAAVARIGVLIKAIRKQLDSYLEKKLANP 1382
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 176/282 (62%), Gaps = 33/282 (11%)
Query: 125 DGEPGEKLDANQSRKSDKTRGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEE 184
DG+ G++ ++++S + R KR F +M + + A K+ ++ + I E
Sbjct: 555 DGKRGKR----KAKQSPQPRTKR---FVSYEMLQIDDAKKM--------RNPKFKAIQEA 599
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
RS LP + K +++NQVV++SG+TGCGK+TQ+PQF+LE+ + K E +IVCTQ
Sbjct: 600 RSSLPAAQTKSQFLDYLNANQVVMVSGQTGCGKSTQIPQFILENCLANRKDEGIEIVCTQ 659
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRRI+A VA R++ ER E++GD +GY+IR++SK + ++FCT G+L R L+ R
Sbjct: 660 PRRIAAIGVASRVADERMESLGDVVGYQIRMDSKRSDRTKLLFCTTGILFRRLMH---DR 716
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
L + + +I+VDE+HER +D +LA++RD+LP P +R+ILMSAT+
Sbjct: 717 L-----------LDNVGYILVDEVHERAVDTDLLLAVLRDLLPKRPDIRIILMSATMKES 765
Query: 363 RFSQYFGG--CPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
F YF G PV+ +PGFTYPVK++YLED+++ ++H
Sbjct: 766 LFVSYFSGKPVPVMHIPGFTYPVKTYYLEDMINSFAYRLTSH 807
>gi|315053064|ref|XP_003175906.1| ATP-dependent RNA helicase DHX8 [Arthroderma gypseum CBS 118893]
gi|311341221|gb|EFR00424.1| ATP-dependent RNA helicase DHX8 [Arthroderma gypseum CBS 118893]
Length = 1377
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 233/442 (52%), Gaps = 35/442 (7%)
Query: 522 LSDSMKQQL---LDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTR 578
LSD +Q L + K + +N ELI ++ + + + +E G IL+FLPG +I
Sbjct: 827 LSDDNEQSLGKTIQKLGSAINYELISNT-VQHIDAQ--LGNEPGGILIFLPGTMEI---- 879
Query: 579 DRLLANPFFRDTSKFVIIPLH-SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDV 637
DR L++ + ++PLH S++PS +QK+VF PPPG RK+I +TN+AET+ITI+D+
Sbjct: 880 DRCLSS--MKHLHFAHLLPLHASLLPS-EQKRVFNAPPPGMRKVIAATNVAETSITIEDI 936
Query: 638 VYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASL 697
V VID+GR+KE Y+P +N+ L+ +W S+A+ KQR GRAGR + G C+ LY++ ++
Sbjct: 937 VAVIDTGRVKETRYNPVDNIVRLEETWASQAACKQRRGRAGRVRNGTCFKLYTRNAEKNM 996
Query: 698 PDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL 757
PEI+R+P+E+LCL VK + N+ DFL TL PP ++ + A+ +L +GAL
Sbjct: 997 ASRPEPEIRRVPLEQLCLSVKAMRGIQNVPDFLANTLTPPDNIAVGGALHMLHRMGALDN 1056
Query: 758 DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR 817
D+ +T LG L + +K++ + ++ C++ LT+A + PF P E+ +
Sbjct: 1057 DQ-LTALGRYLSIIPADLRCAKLMVYGVIFGCIEACLTIAAILTVKSPFVSPREAREEAK 1115
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECW----KNAKQRGQEAWFCSQYFVSSGVMNMLLG 873
+ F G D L ++A++ W + R + W C F+ + +
Sbjct: 1116 EARSVFS-----NGDGDILTDLSAYQQWVDKIREQGYRKAQVW-CRDNFLLPQTLQDISS 1169
Query: 874 MRKQLQTELIKNGFIPEDV------SSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNG 927
R QL L +P D S + + + +I A++ P +A + P K
Sbjct: 1170 NRAQLLGSLKDAALLPVDYKDPGCESRWNRHDKNSHLIRALISGAFNPQIASISFPEK-- 1227
Query: 928 RRFVETAGGAKVRLHPHSLNFK 949
+F + G + L P + K
Sbjct: 1228 -KFAASMTGT-IELDPEARTIK 1247
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 162/269 (60%), Gaps = 27/269 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
+++++ R LP +D I V S+QV +ISGETG GK+TQ QF+L+ + G +
Sbjct: 604 QKMLKARQSLPAWDIQDAILDEVHSHQVTIISGETGSGKSTQCVQFILDDLIKHDLGSSA 663
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER +GD++GY IR +SK + I F T GVLLR L
Sbjct: 664 NIVCTQPRRISALGLADRVSAERCSAVGDDVGYIIRGDSKSKPGVTKITFMTTGVLLRRL 723
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+ G S ++ ++ ++H+++DE+HER +DF+LA++R+ L + L+LILM
Sbjct: 724 QTAGGSVIEALAD---------ISHVVLDEVHERGLDTDFLLAVLREALKTRKDLKLILM 774
Query: 356 SATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
SATLDA+ F YFGG + +PG T+PV+ YL+DVL S +SAS
Sbjct: 775 SATLDANMFINYFGGDKHVGRVNIPGRTFPVEDIYLDDVL------RSTGFNSASPY--- 825
Query: 413 EDPELTEENKSTLDEAISLAWSNDEFDML 441
EL+++N+ +L + I S ++++
Sbjct: 826 ---ELSDDNEQSLGKTIQKLGSAINYELI 851
>gi|195155374|ref|XP_002018580.1| GL17788 [Drosophila persimilis]
gi|194114376|gb|EDW36419.1| GL17788 [Drosophila persimilis]
Length = 1318
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 153/231 (66%), Gaps = 19/231 (8%)
Query: 167 SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL 226
S+ R D+ +Q ++ R KLPI++ + I S ++ N VV+I G TGCGKTTQ+ Q++L
Sbjct: 361 SILDRRHNDSEYQQFLDFRDKLPIAAMRSEILSAINDNPVVIIRGNTGCGKTTQIAQYIL 420
Query: 227 EHIWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSI 283
+ S G+ I TQPRRISA SVAER++ ER E +GD +GY +R ES + + +I
Sbjct: 421 DDYISSGQGGYANIYVTQPRRISAISVAERVARERCEELGDAVGYSVRFESAFPRPYGAI 480
Query: 284 VFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDM 343
+FCT GVLLR L EA + ++HIIVDEIHERD SDF+L I+RDM
Sbjct: 481 LFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDFLLVILRDM 524
Query: 344 LPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+ +YP L +ILMSAT+D FS+YFG CPV++VPG +PV+ F+LEDVL +
Sbjct: 525 VATYPELHVILMSATIDTTLFSKYFGNCPVLEVPGRAFPVQQFFLEDVLQM 575
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 240/457 (52%), Gaps = 23/457 (5%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+ LIE LL I + GAILVFLPGW I L + F ++ K+ I+P HS +
Sbjct: 634 VSFELIESLLLHIKSKNIPGAILVFLPGWNLIFALMKFLQTSNHF-NSPKYRILPCHSQI 692
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P Q+KVF+ P G KIILSTNIAET+ITIDD+V+VID + + K + +NN+++ +
Sbjct: 693 PRDDQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYAT 752
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
W SK + +QR GRAGR + G C+ L S+ R L + PE+ R P+ E+ L +KLL
Sbjct: 753 VWASKTNLEQRKGRAGRVRPGFCFTLCSRARFEVLEENLTPEMFRTPLHEMALTIKLLRL 812
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL K L+PP + A ++L+++ L ++ +T LG L L V P + KM+
Sbjct: 813 GA-IHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDALTPLGRLLARLPVEPRLGKMMV 871
Query: 783 FAILMDCLDPALTLAC-ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ-SDQLAVIA 840
+ C D ++A +S + + F L I +++ A K +L G + SD +A+I
Sbjct: 872 LGAVFGCADLVASMASYSSTFSEVFALDIG--QRRLANHQK----ALSGRKCSDHVAMIV 925
Query: 841 AFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN 898
A + W+ AK +G +E+ FC + MN++ ++QL L + GF E + N
Sbjct: 926 ASQMWQKAKHKGEQEESRFCEWKGLQLSTMNVMFDAKQQLLDLLQQAGFPEECMIPHQVN 985
Query: 899 ARVPGII----HAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKK 954
A V I A+L GLYP + HK R+ + T A + LH S+N +
Sbjct: 986 ANVEDPILDTALALLCLGLYPNIC----VHKEKRKVLTTESKAAL-LHKTSVNCS-NLAV 1039
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLAT 991
T P V+ E R + + ++V PL ++L +
Sbjct: 1040 TFPYPFFVFGEKIRTR-AVSCKQLSMVAPLQVMLFGS 1075
>gi|326476239|gb|EGE00249.1| DEAD/DEAH box helicase [Trichophyton tonsurans CBS 112818]
Length = 1364
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 212/403 (52%), Gaps = 27/403 (6%)
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
+ +E G IL+FLPG +I DR L++ + ++PLH+ + +QK+VF PPP
Sbjct: 849 LGNEPGGILIFLPGTMEI----DRCLSS--MKHLHFAHLLPLHASLLPNEQKRVFNAPPP 902
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
G RK+I +TN+AET+ITI+D+V VID+GR+KE Y+P +N+ L+ +W S+A+ KQR GR
Sbjct: 903 GKRKVIAATNVAETSITIEDIVAVIDTGRVKETRYNPVDNIVRLEETWASQAACKQRRGR 962
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDP 736
AGR + G C+ LY++ ++ PEI+R+P+E+LCL VK + N+ DFL TL P
Sbjct: 963 AGRVRNGTCFKLYTRNAEQNMASRPEPEIRRVPLEQLCLSVKAMRGIQNVPDFLANTLTP 1022
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P +V + A+ +L +G L D+ +T LG L + +K++ + ++ C++ LT+
Sbjct: 1023 PDNVAVGGALHMLHRMGVLDNDQ-LTALGRYLSIIPADLRCAKLMVYGVIFGCIEACLTI 1081
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW----KNAKQRG 852
A + PF P E+ AK S G D L +AA++ W + R
Sbjct: 1082 AAILTVKSPFASPREAREE-----AKEARISFSNGDGDLLTDLAAYQQWVDKIREQGYRK 1136
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV------SSCSHNARVPGIIH 906
+AW C F+ + + R QL L +P D S + + + +I
Sbjct: 1137 AQAW-CRDKFLLPQTLQDISSNRAQLLGSLKDAALLPVDYKDPDCESRWNRHNKNTHLIR 1195
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
A++ P +A + P K +F + G + L P + K
Sbjct: 1196 ALISGAFNPQIASISFPEK---KFASSMTGT-IELDPEARTIK 1234
Score = 179 bits (455), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 160/267 (59%), Gaps = 27/267 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
+ +++ R LP +D I V S+QV +ISGETG GK+TQ QF+L+ + + G +
Sbjct: 591 QSMLKARRALPAWDIQDAILDEVHSHQVTIISGETGSGKSTQCVQFILDDLIRRDLGASA 650
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER ++GD++GY IR +SK + I F T GVLLR L
Sbjct: 651 NIVCTQPRRISALGLADRVSAERCSSVGDDVGYIIRGDSKSKPGVTKITFMTTGVLLRRL 710
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+ G S ++ ++ ++H+++DE+HER +DF+LA++R+ L + L+LILM
Sbjct: 711 QTAGESVVEALAD---------ISHVVLDEVHERGLDTDFLLAVLREALETRKDLKLILM 761
Query: 356 SATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
SATLDA+ F YFGG + +PG T+PV+ YL+DVL DS + P
Sbjct: 762 SATLDANMFINYFGGDKQVGRVNIPGRTFPVEDVYLDDVL------RRTGFDSNT---PY 812
Query: 413 EDPELTEENKSTLDEAISLAWSNDEFD 439
E P +E++ +L +AI S +D
Sbjct: 813 EGP---DESEQSLGKAIQKLGSGINYD 836
>gi|62020087|gb|AAH08773.1| DHX9 protein, partial [Homo sapiens]
Length = 596
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|116283708|gb|AAH25245.1| DHX9 protein [Homo sapiens]
Length = 593
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|33878473|gb|AAH14246.1| DHX9 protein, partial [Homo sapiens]
Length = 599
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>gi|296815954|ref|XP_002848314.1| pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
[Arthroderma otae CBS 113480]
gi|238841339|gb|EEQ31001.1| pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
[Arthroderma otae CBS 113480]
Length = 1355
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 234/459 (50%), Gaps = 55/459 (11%)
Query: 505 ENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAI 564
EN+P + + I++ L + L+ + ++ +L D E G I
Sbjct: 808 ENEPSLGKTIQR-----LGGGINYDLISSTVQHIDSQLGD---------------EPGGI 847
Query: 565 LVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH-SMVPSVQQKKVFKRPPPGCRKIIL 623
L+FLPG +I DR L++ R ++PLH S++PS +QK+VF PP G RK+I
Sbjct: 848 LIFLPGTMEI----DRCLSS--MRHLHFAHLLPLHASLLPS-EQKRVFYAPPQGKRKVIA 900
Query: 624 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAG 683
+TN+AET+ITIDD+V VID+GR+KE Y+P +N+ L+ +W S+A+ KQR GRAGR + G
Sbjct: 901 ATNVAETSITIDDIVAVIDTGRVKETRYNPVDNIVRLEETWASQAACKQRRGRAGRVRNG 960
Query: 684 ICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIR 743
CY LY++ ++ PEI+R+P+E+LCL VK + N+ FL TL PP +V +
Sbjct: 961 TCYKLYTRNAEQNMASRPEPEIRRVPLEQLCLSVKAMRGIQNVPGFLANTLTPPDNVAVG 1020
Query: 744 NAIIVLQDIGALSLDEKVTELGEKLGCLSVHPL---MSKMLFFAILMDCLDPALTLACAS 800
A+ +L +GAL D+ +T LG CLS+ P +K++ + ++ C++ LT+A
Sbjct: 1021 GALHMLHRMGALDNDQ-LTALGR---CLSIIPADLRCAKLMVYGVIFGCIEACLTIAAIL 1076
Query: 801 DYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW----KNAKQRGQEAW 856
+ PF P E+ AK +S G D L +AA++ W + R + W
Sbjct: 1077 TVKSPFASPREAREE-----AKEARSSFSSGDGDLLTDLAAYQQWVDKVREQGYRKAQTW 1131
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV------SSCSHNARVPGIIHAVLM 910
C F+ + + R QL L +P D S + + + +I A++
Sbjct: 1132 -CRDNFLLPQTLQDISSNRAQLLGSLKDAALLPVDYKDPESQSRWNRHDKNTYLIRALIS 1190
Query: 911 AGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
P +A + P K +F + G + L P + K
Sbjct: 1191 GAFNPQIASISFPEK---KFAASMTGT-IELDPEARTIK 1225
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 158/269 (58%), Gaps = 27/269 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
+ +++ R LP +D I V S+QV ++SGETG GK+TQ QF+L+ + + G +
Sbjct: 582 QNMLKARQSLPAWDIQDEILDEVYSHQVTIVSGETGSGKSTQCVQFILDDLIRRDLGSSA 641
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER +GD++GY IR +SK + + I F T GVLLR L
Sbjct: 642 NIVCTQPRRISALGLADRVSAERCSKVGDDVGYIIRGDSKSTQGVTKITFMTTGVLLRRL 701
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+ G S ++ ++ ++H+++DE+HER +DF+LA++++ L L+LILM
Sbjct: 702 QTAGESVVEALAD---------ISHVVLDEVHERGLDTDFLLAVLKEALKIRKDLKLILM 752
Query: 356 SATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
SATLDA+ F YFGG + +PG T+PV YL+D+L + DS N
Sbjct: 753 SATLDANMFINYFGGDKQVGRVTIPGRTFPVDDIYLDDIL------RNTGFDS------N 800
Query: 413 EDPELTEENKSTLDEAISLAWSNDEFDML 441
E ++EN+ +L + I +D++
Sbjct: 801 MPYEHSDENEPSLGKTIQRLGGGINYDLI 829
>gi|225556006|gb|EEH04296.1| ATP-dependent RNA helicase DHX8 [Ajellomyces capsulatus G186AR]
Length = 1344
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 247/491 (50%), Gaps = 70/491 (14%)
Query: 543 IDLVLIEQLLRKICMDSED--GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLH- 599
I+ LI +R I +D G IL+FLPG +I++ L PF ++PLH
Sbjct: 831 INYNLIASTVRYIDSQLKDKPGGILIFLPGTMEIDRCLAALNYLPFVH------LLPLHA 884
Query: 600 SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVST 659
S++PS +Q++VF P G RK+I +TN+AET+ITI+DVV VID+GR+KE YD +N+
Sbjct: 885 SLLPS-EQRQVFLPAPLGKRKVIAATNVAETSITIEDVVAVIDTGRVKETRYDATDNIVH 943
Query: 660 LQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKL 719
L+ W S+A+ KQR GRAGR +G CY +Y++ A++ PEI+R+P+E+LCL VK
Sbjct: 944 LEEVWASQAACKQRRGRAGRVSSGTCYKMYTRKAEANMAPRPEPEIRRVPLEQLCLSVKA 1003
Query: 720 LDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSK 779
+ ++ FL TL PP +V I A+ +L IGAL ++++T LG + + ++K
Sbjct: 1004 MSGIQDVAAFLANTLTPPENVAIEGALELLHRIGALD-NQQLTALGRYISIIPTDLRLAK 1062
Query: 780 MLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
++ + + CL+ LT+A + PF +SP +K+ AK AS G D L +
Sbjct: 1063 LMVYGAIFGCLESCLTIAAILTVKSPF---VSPRDKRE--EAKQARASFSTGDGDLLIDL 1117
Query: 840 AAFECWKNAKQRGQEAW----FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV--S 893
AA++ W + + + Q W +C+ F+ + + R QL + L G IP +
Sbjct: 1118 AAYQQW-SERVKQQSPWETQSWCNHNFLVPKTLREISSNRSQLLSSLKDIGIIPVSYRHT 1176
Query: 894 SCSHNARVPG----------IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGG------- 936
+ + N P ++ A++ P +AR+ P K +F + G
Sbjct: 1177 NDTANGATPNRWNSQNSNTQLLRALIAGAFNPQIARISFPDK---KFAASMSGTIELDPD 1233
Query: 937 -----------AKVRLHPHSLNF---KLSFKKTDDCPLMVY------DEITRG---DGGM 973
+V +HP S F SF T L+++ D + RG DG
Sbjct: 1234 ARTIKYFNQENGRVFVHPSSSLFDAQSFSFSAT----LLLFSGPITLDTLGRGVLVDGWQ 1289
Query: 974 HVRNCTVVGPL 984
+R +G L
Sbjct: 1290 RLRGWARIGVL 1300
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 141/223 (63%), Gaps = 21/223 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
++++ R LP + I V S+QV +ISGETG GK+TQ QF+L+ + + G
Sbjct: 580 QKMLRARRSLPAWDMQKAINQAVHSHQVTIISGETGSGKSTQSVQFILDDMIKRDLGSAV 639
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER ++GD +GY +R +SK ++ I F T GVLLR +
Sbjct: 640 NIVCTQPRRISALGLADRVSDERCSSVGDEVGYIVRGDSKVKYGTTKITFMTTGVLLRRM 699
Query: 296 VSQGVSRLKEASNKPAKDDVSA---LTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRL 352
+ G +D VS+ ++H++VDE+HER +DF+LA++RD+L L+L
Sbjct: 700 QTSG------------QDVVSSFADISHVVVDEVHERSLDTDFLLALLRDVLRHRKDLKL 747
Query: 353 ILMSATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVL 392
ILMSATLDAD F+QYFGG + + G T+PV+ YL+DV+
Sbjct: 748 ILMSATLDADIFTQYFGGDAKVGRVNISGRTFPVEDLYLDDVV 790
>gi|195130707|ref|XP_002009793.1| GI15043 [Drosophila mojavensis]
gi|193908243|gb|EDW07110.1| GI15043 [Drosophila mojavensis]
Length = 886
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/474 (33%), Positives = 249/474 (52%), Gaps = 27/474 (5%)
Query: 528 QQLLDKY-LA-TVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRL-LAN 584
+QL+ Y LA +N + ID LI LL+ + + GA++V+LPG++D+ K D+L A
Sbjct: 326 EQLVRAYSLAHNINEQEIDNSLIVSLLQVLLLMGMKGAVIVYLPGYQDMTKLMDQLQTAL 385
Query: 585 PFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSG 644
P T ++ LHS V S +Q+ VF+ P K++LSTNI +T+ITI D++YVID+G
Sbjct: 386 P----TDLVKVLLLHSQVDSQRQRDVFREYPNVQLKVVLSTNIGQTSITIPDLLYVIDTG 441
Query: 645 RMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPE 704
R+K K+YDP S L +W+SKA A+QR GRAGR GICY LYS + S F VPE
Sbjct: 442 RVKMKTYDPSTGASHLACTWISKADAQQRTGRAGRRMDGICYRLYSNTQFESFNCFTVPE 501
Query: 705 IKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGAL-SLDEKVTE 763
I R ++E+CL K+ PN IE FL + LD P I + L+ +G L DE VT+
Sbjct: 502 ILRHTLDEICLLAKIAAPNKPIEQFLAQALDRPQPAAIAQSCAKLKLLGVLRDEDESVTQ 561
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPI--SPNEKKRATAA 821
LG+ + L + ++K L + I C+ + RDPF LP S ++R +
Sbjct: 562 LGQIIAELPLDVQLAKCLVYGIYYQCVGSLSIITAYYSVRDPFVLPSDRSGRTEQRKSRD 621
Query: 822 KFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQ 879
F + SD + V+ + + +A RG FC + + M+ + L+
Sbjct: 622 FFSI----DASSDSIGVLQLYHAYMSADTRGSREMDRFCERNCLCRKSMDNFVSAVHTLR 677
Query: 880 TELIK-NGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAK 938
L++ F+ ++++ N ++ L AGLYP + + P + R V+ + +
Sbjct: 678 LTLMRIIKFVNINMATRYDNN--LNMVRLALAAGLYPRIVYVDHPRHS--RLVDES-DPR 732
Query: 939 VRLHPHSLNFKLSFK---KTDDCPLMVYDEITRGDGGM-HVRNCTVVGPLPLLL 988
V+L +S+ L F K++ +VY E TR G + H+ + T++ L + L
Sbjct: 733 VQLSRNSI-LPLCFAKRVKSNMSEWLVYVEKTRSAGLVSHIEHATLISSLMVAL 785
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 133/212 (62%), Gaps = 12/212 (5%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
++ ER LPI + ++ I ++ +QV++I+G TG GK+TQ+PQ+LLE + + +IV
Sbjct: 104 LIAERKDLPIYTKRNRIFQLLEMSQVLIINGATGSGKSTQLPQYLLEDAAAMKKPVRIVV 163
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
+QPRRI+A SV+ RI+ ERGE++GD +GY IR+ESK ++ + T+G LLR L G
Sbjct: 164 SQPRRIAAISVSGRIAEERGESLGDTVGYIIRMESKYSNNTVLSLTTSGCLLRTLAMNGS 223
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
+ TH+++DE+H+RD +DF+L I+ L L++ILMSAT+D
Sbjct: 224 EFFENT------------THLVIDEVHDRDLDTDFLLLAIKLELERNKSLKVILMSATMD 271
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
S+YF PV+ V G ++ V+ + LED+L
Sbjct: 272 LLALSKYFDDAPVLNVEGRSFNVRVYSLEDIL 303
>gi|326480858|gb|EGE04868.1| DEAD/DEAH box helicase [Trichophyton equinum CBS 127.97]
Length = 1346
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 212/403 (52%), Gaps = 27/403 (6%)
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
+ +E G IL+FLPG +I DR L++ + ++PLH+ + +QK+VF PPP
Sbjct: 831 LGNEPGGILIFLPGTMEI----DRCLSS--MKHLHFAHLLPLHASLLPNEQKRVFNAPPP 884
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
G RK+I +TN+AET+ITI+D+V VID+GR+KE Y+P +N+ L+ +W S+A+ KQR GR
Sbjct: 885 GKRKVIAATNVAETSITIEDIVAVIDTGRVKETRYNPVDNIVRLEETWASQAACKQRRGR 944
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDP 736
AGR + G C+ LY++ ++ PEI+R+P+E+LCL VK + N+ DFL TL P
Sbjct: 945 AGRVRNGTCFKLYTRNAEQNMASRPEPEIRRVPLEQLCLSVKAMRGIQNVPDFLANTLTP 1004
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P +V + A+ +L +G L D+ +T LG L + +K++ + ++ C++ LT+
Sbjct: 1005 PDNVAVGGALHMLHRMGVLDNDQ-LTALGRYLSIIPADLRCAKLMVYGVIFGCIEACLTI 1063
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW----KNAKQRG 852
A + PF P E+ AK S G D L +AA++ W + R
Sbjct: 1064 AAILTVKSPFASPREAREE-----AKEARISFSNGDGDLLTDLAAYQQWVDKIREQGYRK 1118
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV------SSCSHNARVPGIIH 906
+AW C F+ + + R QL L +P D S + + + +I
Sbjct: 1119 AQAW-CRDKFLLPQTLQDISSNRAQLLGSLKDAALLPVDYKDPDCESRWNRHNKNTHLIR 1177
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
A++ P +A + P K +F + G + L P + K
Sbjct: 1178 ALISGAFNPQIASISFPEK---KFASSMTGT-IELDPEARTIK 1216
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 162/269 (60%), Gaps = 27/269 (10%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
+ +++ R LP +D I V S+QV +ISGETG GK+TQ QF+L+ + + G +
Sbjct: 573 QSMLKARRALPAWDIQDAILDEVHSHQVTIISGETGSGKSTQCVQFILDDLIRRDLGASA 632
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLLRLL 295
IVCTQPRRISA +A+R+S ER ++GD++GY IR +SK + I F T GVLLR L
Sbjct: 633 NIVCTQPRRISALGLADRVSAERCSSVGDDVGYIIRGDSKSKPGVTKITFMTTGVLLRRL 692
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+ G S ++ ++ ++H+++DE+HER +DF+LA++R+ L + L+LILM
Sbjct: 693 QTAGESVVEALAD---------ISHVVLDEVHERGLDTDFLLAVLREALETRKDLKLILM 743
Query: 356 SATLDADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPN 412
SATLDA+ F YFGG + +PG T+PV+ YL+DVL DS + P
Sbjct: 744 SATLDANMFINYFGGDKQVGRVNIPGRTFPVEDVYLDDVL------RRTGFDSNT---PY 794
Query: 413 EDPELTEENKSTLDEAISLAWSNDEFDML 441
E P +E++ +L +AI S +D++
Sbjct: 795 EGP---DESEQSLGKAIQKLGSGINYDLI 820
>gi|170084425|ref|XP_001873436.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650988|gb|EDR15228.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1339
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 265/519 (51%), Gaps = 50/519 (9%)
Query: 510 VAQIIKKHMENALSDSMKQQLLDKYLATV-----NPELIDLVLIEQLLRKI-CMDSEDGA 563
V Q K +AL D ++ LD+ V E +D LI L+ I ++E G
Sbjct: 766 VKQSKKTDAGDALRDELRSHGLDEETINVVQSISKTERLDYQLIAALVDHIRSTETEPGG 825
Query: 564 ILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIIL 623
IL+FLPG +I + + + R ++PLH+ + +++Q++VFK+ KII+
Sbjct: 826 ILIFLPGVNEIRQCAEAIRKVIGQRGE----VLPLHANLSNMEQQRVFKKT--SLWKIIV 879
Query: 624 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAG 683
+TN+AET+ITIDDV +VID G++KE YD + + L +WV++A+A+QR GRAGR + G
Sbjct: 880 ATNVAETSITIDDVTHVIDGGKVKETRYDSESALLRLVETWVTRAAARQRRGRAGRTRPG 939
Query: 684 ICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIR 743
+CY LY++ R ++ F PEI R+P+E + L VK +++ FL + +DPP +
Sbjct: 940 VCYKLYTRRRETAMASFPTPEILRVPLESISLTVKATREAADVKSFLSQAIDPPSLSAMN 999
Query: 744 NAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYR 803
A LQ+IGA+ D K+T LG+ + L + ++K+L F + CL+P LT+A +
Sbjct: 1000 TAWTTLQEIGAVDSDNKLTALGKHISMLPLDIRLAKILIFGTIFQCLNPILTIAACLSSK 1059
Query: 804 DPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQE----AWFCS 859
F P+ E+ + A+F G+SD L + AF + G FC
Sbjct: 1060 SIFVAPMDKREEAKQARARFA-----SGRSDLLTDLEAFSQCAKMRSEGSSNHAIKLFCE 1114
Query: 860 QYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS-----HNARVPGIIHAVLMAGLY 914
+ F+++ + + +R+ L + L++ GF+P D S H+ V ++ AV+ GL+
Sbjct: 1115 ENFIATDTIREVTTLRQDLLSSLVEIGFVPNDSVPTSPELNKHSENV-NLLKAVIAGGLW 1173
Query: 915 PMVARLRPPHKNGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTD 956
P VAR+ P K+ +F + GA +V LHP S+ F + K+
Sbjct: 1174 PRVARVHLP-KSAVKFDKVQAGAIQRENTANEFKFFDIGTGRVFLHPASILFSNAVWKS- 1231
Query: 957 DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
P + Y + + +R+ T + LLL + V
Sbjct: 1232 --PFVAYFQ-KHMTTKVFLRDATEIPLYALLLFGGPLTV 1267
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 145/217 (66%), Gaps = 18/217 (8%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW--SKGETCKI 238
I+ R +LP + +D ++S++VV++ GETGCGKTTQ+PQF+L+ + ++G I
Sbjct: 559 ILATRKRLPAFAARDQFLEHLESSRVVIVVGETGCGKTTQIPQFILDSLILSNRGGEASI 618
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+ TQPRRISA SVA R+S ER E+ +GY +R ESK K + ++FCT GV+LR L S
Sbjct: 619 IVTQPRRISAISVASRVSYERLED--GCVGYAVRGESKQNKRTKLLFCTTGVVLRRLSS- 675
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
D + +TH+IVDE+HER DF+L ++++L ++P L++ILMSAT
Sbjct: 676 -------------GDSLQNVTHVIVDEVHERSLDGDFLLLELKELLKTHPRLKVILMSAT 722
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
++ + F +YF P++ +PGFT+PVK FYLED++S++
Sbjct: 723 INHETFVRYFNDAPLLTIPGFTHPVKDFYLEDIVSLM 759
>gi|39104498|dbj|BAC65677.3| mKIAA0890 protein [Mus musculus]
Length = 1041
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 368 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 426
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 427 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 486
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 487 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 546
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 547 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 592
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 593 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 647
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Query: 597 PLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNN 656
P+HS +P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD
Sbjct: 685 PVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTK 744
Query: 657 VSTLQSSW 664
V+ L SW
Sbjct: 745 VAPL--SW 750
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 752 IGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLPI 810
IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 759 IGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF---- 812
Query: 811 SPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSGV 867
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 813 SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPS 872
Query: 868 MNMLL---GMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMV 917
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP +
Sbjct: 873 LRFIHGSPGLIKQF-SENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNL 931
Query: 918 ARLR 921
++R
Sbjct: 932 IQVR 935
>gi|296821822|ref|XP_002850185.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
[Arthroderma otae CBS 113480]
gi|238837739|gb|EEQ27401.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
[Arthroderma otae CBS 113480]
Length = 1376
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 251/524 (47%), Gaps = 69/524 (13%)
Query: 442 LELVSLEGSPNVYNYQHTLTGLTPLMVLAGK------GRVGDVCMLLSLGADCQLKAKDG 495
L+LV + + + + L G P++ + G+ + DV L D DG
Sbjct: 781 LKLVLMSATVDAKRFSGYLNG-APILNIPGRMYPVETRYLEDVIELTQYRPDKIESYTDG 839
Query: 496 RTALQLGEQENQPEVAQIIKKHMENALSDSMKQQL-LDKYLATVNPELIDLVLIEQLLRK 554
E+ + E + +K + N + L D+Y N LI LL K
Sbjct: 840 TEDTSDDEKSSAAEDSTTLKSTLANYSKQTQTTVLSFDEYRLNYN-------LITNLLSK 892
Query: 555 ICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKV 610
I E AIL+F+PG +I + D +L+ P F+ S +VI LHS + S Q+K
Sbjct: 893 IATHPELLEFSKAILIFMPGLAEIRRLHDEILSIPVFQ--SGWVIHSLHSSIASEDQEKA 950
Query: 611 FKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASA 670
F PP G RK++++TNIAET ITI D+ VID+G+ K +D +S L +V++A+A
Sbjct: 951 FIVPPHGMRKVVIATNIAETGITIPDITAVIDTGKEKVMRFDERRQISKLVEVFVARANA 1010
Query: 671 KQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPNCN---I 726
KQR GRAGR Q GIC+HL+S+ R L + Q+PE+ R+ +++L L+VK+ CN I
Sbjct: 1011 KQRRGRAGRVQQGICFHLFSKYRHDKLLSEQQIPEMLRLSLQDLILRVKI----CNLGDI 1066
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
E L + LDPP S IR AI L+ + AL+ E +T LG++L L + + K++ +
Sbjct: 1067 ESTLSEALDPPSSKNIRRAIDSLKTVKALTGAEALTPLGKQLAKLPLDVFLGKLILYGAF 1126
Query: 787 MDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWK 846
C+D A+++A + PF I+ + A+ FE G SD L V A+ WK
Sbjct: 1127 FKCIDAAVSIAAILSCKSPFLNDINRKSQIEASRKAFE-----RGDSDLLTVYNAYCAWK 1181
Query: 847 NAKQRGQEAWFCS---QYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPG 903
+ EA + Q+FV+ PE V S+N
Sbjct: 1182 KHRADKSEARYAGRKRQFFVA------------------------PEHVDMNSNN---DT 1214
Query: 904 IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
I+++V+ YP RL H G R V + V LH S+N
Sbjct: 1215 IVNSVIAWSFYP---RLLTRHGKGWRNV--SNNQAVVLHSASVN 1253
Score = 196 bits (498), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 148/236 (62%), Gaps = 20/236 (8%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
++SL + + +++ E R+ LPI SF+ + + NQ ++I GETG GK+TQ+P F
Sbjct: 604 LQSLWTDRSSSPSFQRMTESRAGLPIWSFRGQVIDALARNQTIIICGETGSGKSTQIPSF 663
Query: 225 LLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN---IGDN---IGYKIRLESKGG 278
+LE+ + G CKI T+PRRISA S+A R+S E GEN IG N +GY IRLESK
Sbjct: 664 ILENELASGRECKIYVTEPRRISAISLARRVSEELGENRNDIGTNRSLVGYAIRLESKFT 723
Query: 279 KHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLA 338
+ ++F T G+++R+L +P D +TH+I+DE+HER DF+L
Sbjct: 724 ASTRLIFATTGIVIRML------------ERP--QDFDNVTHLILDEVHERTIDGDFLLI 769
Query: 339 IIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
++R +L S L+L+LMSAT+DA RFS Y G P++ +PG YPV++ YLEDV+ +
Sbjct: 770 VLRRLLNSRADLKLVLMSATVDAKRFSGYLNGAPILNIPGRMYPVETRYLEDVIEL 825
>gi|302497007|ref|XP_003010504.1| hypothetical protein ARB_03205 [Arthroderma benhamiae CBS 112371]
gi|291174047|gb|EFE29864.1| hypothetical protein ARB_03205 [Arthroderma benhamiae CBS 112371]
Length = 1345
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 213/403 (52%), Gaps = 27/403 (6%)
Query: 557 MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPP 616
+ +E G IL+FLPG +I DR L++ + ++PLH+ + +QK+VF PP
Sbjct: 842 LGNEPGGILIFLPGTMEI----DRCLSS--MKHLHFAHLLPLHASLLPNEQKRVFNAPPT 895
Query: 617 GCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGR 676
G RK+I +TN+AET+ITI+D+V VID+GR+KE Y+P +N+ L+ +W S+A+ KQR GR
Sbjct: 896 GKRKVIAATNVAETSITIEDIVAVIDTGRVKETRYNPVDNIVRLEETWASQAACKQRRGR 955
Query: 677 AGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDP 736
AGR + GIC+ LY++ ++ PEI+R+P+E+LCL VK + N+ DFL TL P
Sbjct: 956 AGRVRNGICFKLYTRNAEKNMASRPEPEIRRVPLEQLCLSVKAMRGIQNVPDFLANTLTP 1015
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P +V + A+ +L +GAL D+ +T LG L + +K++ + ++ C++ LT+
Sbjct: 1016 PDNVAVGGALHMLHRMGALDNDQ-LTALGRYLSMIPADLRCAKLMVYGVIFGCIEACLTI 1074
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW----KNAKQRG 852
A + PF P E+ AK +S G D L +AA++ W + R
Sbjct: 1075 AAILTVKSPFASPREAREE-----AKEARSSFSNGDGDLLTDLAAYQQWTDKIREQGYRK 1129
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV------SSCSHNARVPGIIH 906
+ W C F+ + + R QL L +P D + + + + +I
Sbjct: 1130 AQVW-CRDKFLLPQTLQDISSNRAQLLGSLKDAALLPVDYKDPDCETRWNRHNKNTHLIR 1188
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
A++ P +A + P K +F + G + L P + K
Sbjct: 1189 ALISGAFNPQIASISFPEK---KFASSMTGT-IELDPEARTIK 1227
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 184/324 (56%), Gaps = 36/324 (11%)
Query: 125 DGEPGEKLDANQSRKSDKTRGKRVDIFCKPKM-SKAEIAMKVESLTSRIEKDANLRQIVE 183
+GE +NQ KS RG + +PK + +I E+ + E+ +++++
Sbjct: 537 NGENDLPRTSNQGSKSKLARG----MALRPKGPASNDIRRSWEAKQTTPEQ----QKMLK 588
Query: 184 ERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKIVCT 241
R LP +D I V S+QV +ISGETG GK+TQ QF+L+ + + G + IVCT
Sbjct: 589 ARQALPAWDIQDAILDEVHSHQVTIISGETGSGKSTQCVQFILDDLIRRDLGSSANIVCT 648
Query: 242 QPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKH-SSIVFCTNGVLLRLLVSQGV 300
QPRRISA +A+R+S ER ++GD++GY IR +SK + I F T GVLLR L + G
Sbjct: 649 QPRRISALGLADRVSAERCSSVGDDVGYIIRGDSKSKPGVTKITFMTTGVLLRRLQTAGE 708
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
S ++ ++ ++H+++DE+HER +DF+LA++R+ L L+LILMSATLD
Sbjct: 709 SVVEALAD---------ISHVVLDEVHERGLDTDFLLAVLREALRIRKDLKLILMSATLD 759
Query: 361 ADRFSQYFGG---CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPEL 417
A+ F YFGG + +PG T+PV+ YL+DVL S DS N E
Sbjct: 760 ANMFINYFGGDKQVGRVNIPGRTFPVEDIYLDDVL------RSTGFDS------NTPYEG 807
Query: 418 TEENKSTLDEAISLAWSNDEFDML 441
++E++ +L +AI S +D++
Sbjct: 808 SDESEQSLGKAIQKLGSGINYDLI 831
>gi|158296133|ref|XP_316626.4| AGAP006599-PA [Anopheles gambiae str. PEST]
gi|157016367|gb|EAA11305.4| AGAP006599-PA [Anopheles gambiae str. PEST]
Length = 1309
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 154/231 (66%), Gaps = 19/231 (8%)
Query: 169 TSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH 228
+SR++ D L++ + R KLPIS+ + I ++ + VVLI G TGCGKTTQ+ QF+LE
Sbjct: 357 SSRLKDDLELQKSMRTREKLPISAMRKPIMEAINEHPVVLIRGNTGCGKTTQIAQFILED 416
Query: 229 IWSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVF 285
+ G+ C + TQPRRISA SV+ERI+ ER EN+G +GY +R +S + + SI+F
Sbjct: 417 YINSGQGAYCNVCVTQPRRISAISVSERIANERCENLGVTVGYSVRFDSVLPRPYGSILF 476
Query: 286 CTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLP 345
CT GVLLR L + + ++H+IVDEIHERD SDF+L ++RDM+
Sbjct: 477 CTIGVLLRKL----------------EGGLRGVSHVIVDEIHERDVNSDFILVVLRDMVH 520
Query: 346 SYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+YP LR+ILMSAT+D FS+YFG CPV++VPG +PV+ +LED + +LK
Sbjct: 521 TYPDLRVILMSATIDTSLFSRYFGDCPVLEVPGRAFPVEQLFLEDCIELLK 571
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 225/453 (49%), Gaps = 31/453 (6%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
LI L+ + GA+LVFL GW I +L + V++PLHS +P
Sbjct: 640 LITALVDYVDQQGRPGAVLVFLAGWNMIFALMRQL------QPRQNLVVLPLHSQLPRED 693
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q+KVF RK+IL+TNIAET+ITIDDVVYVID+ + + K + +NN++ + W +
Sbjct: 694 QRKVFNHYGQR-RKVILATNIAETSITIDDVVYVIDTCKARMKLFTSHNNMTNYATVWAA 752
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
+ + +QR GRAGR G+C+ L S+ R A L + PE+ R P+ EL L +KLL I
Sbjct: 753 RTNLEQRKGRAGRVSPGMCFTLCSRARFAKLEENLTPEMFRTPLHELALSIKLLRLGA-I 811
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL K ++PP + A ++L+++ L +E++T G L L + P + KM+ + L
Sbjct: 812 GKFLSKAIEPPPLDAVIEAEVLLKEMRCLDEEEQLTPFGRILARLPIEPRLGKMMVLSTL 871
Query: 787 MDCLDPALTLACASD-YRDPFTLPISPNEKKRATAAKFELASLYGGQ--SDQLAVIAAFE 843
D T+A S + + F L + ++R + L+ GQ SD +A++ AFE
Sbjct: 872 FGLCDTLTTMAAYSGTFSEVFLLELG---QRRLMNHQKALS----GQTCSDYVAMLTAFE 924
Query: 844 CWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARV 901
W + G+EA FC + + + +KQL L GF + + ++
Sbjct: 925 MWSKKRAIGEEAEMRFCDWKGLQMPTLRSIAEAKKQLIENLCLAGFPQDTMMPLRFDSEN 984
Query: 902 PG----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDD 957
P + A+L GLYP V HK RR + T A + +H S+N + T
Sbjct: 985 PDPDLEMAMALLCIGLYPNVCY----HKEKRRVLTTESRAAL-MHKTSVNCS-NAPTTFP 1038
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P V+ E R + + ++V P+ LLL
Sbjct: 1039 YPFFVFGEKIRTR-AVSCKQMSMVTPIHLLLFG 1070
>gi|149059354|gb|EDM10361.1| rCG44442 [Rattus norvegicus]
Length = 1212
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 207/393 (52%), Gaps = 33/393 (8%)
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
+I+L+TNIAET ITI DVV+VID+GR KE Y + +S+L ++VSKASA QR GRAGR
Sbjct: 771 QIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 830
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVS 739
+ G C+ LY++ R ++ VPEI R+P+EELCL + D + EDFL K LDPP
Sbjct: 831 VRDGFCFRLYTRERFEGFLEYSVPEILRVPLEELCLHIMKCDLG-SPEDFLSKALDPPQP 889
Query: 740 VTIRNAIIVLQDIGALSLDE-KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
I NA+ +L+ IGA E K+T LG+ L L V+ + KML F + CL+P TLA
Sbjct: 890 QVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAA 949
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRG---QEA 855
+ PF PI R A +SL SD L + A+ WK A+Q G E
Sbjct: 950 VMTEKSPFITPIG-----RKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEI 1004
Query: 856 WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP--------GIIHA 907
+C + F++ + L ++++L + GF S+ + P ++ A
Sbjct: 1005 SYCQRNFLNRTSLLTLEDVKQELMKLVRAAGF---SSSTSWEGKKGPQALSFQDIALLKA 1061
Query: 908 VLMAGLYPMVARLRPPH-----KNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMV 962
VL AGLY V ++ + VETA G K ++HP S+N L ++
Sbjct: 1062 VLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQG-KAQVHPSSVNRDLQ-----TYGWLL 1115
Query: 963 YDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
Y E R +++R T++ P P+LL +I V
Sbjct: 1116 YQEKVRY-ARVYLRETTLITPFPVLLFGGDIEV 1147
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 151/242 (62%), Gaps = 22/242 (9%)
Query: 159 AEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
AE V +L R++ +++++ER +LP+ + I T+ ++VV+++GETG GK+
Sbjct: 505 AEDLEPVRNLFRRLQSTPKYQRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKS 564
Query: 219 TQVPQFLLEHIW---SKGETCKIVCTQPRRISATSVAERISVERGENIGDN-----IGYK 270
TQVP FLLE + C IVCTQPRRISA S+A R+ E G G GY+
Sbjct: 565 TQVPHFLLEDLLLNDCGARKCNIVCTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQ 624
Query: 271 IRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERD 330
IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HER
Sbjct: 625 IRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LADVSHVIVDEVHERS 670
Query: 331 RYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLED 390
SDF+L I++++L L LILMSAT+D+D+FS YF CP++++ G +YPV+ F+LED
Sbjct: 671 VQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLED 730
Query: 391 VL 392
++
Sbjct: 731 IV 732
>gi|358335935|dbj|GAA54529.1| ATP-dependent RNA helicase A [Clonorchis sinensis]
Length = 1353
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 267/561 (47%), Gaps = 76/561 (13%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
L+ LL +I GA+LVFLPGW I+ R L A+P F + ++I+PLHS VP
Sbjct: 692 LVGCLLEQIAGMGIPGAVLVFLPGWNIISMLRKFLQAHPRF-GGNDYLILPLHSQVPRED 750
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q+ VF+ PPPG KI+LSTNIAET+ITI+DVV+VID ++ K + NN+++ +SW S
Sbjct: 751 QRLVFRSPPPGVTKIVLSTNIAETSITINDVVFVIDLCLVRMKLFTARNNMTSYSTSWAS 810
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
K + +QR GRAGR + G +HL S+ R L PEI R P+ +L L +KLL +
Sbjct: 811 KTNLEQRRGRAGRVRPGYAFHLCSRARFDRLEQHSTPEILRTPLHDLALLIKLLRLG-PV 869
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
DFL+K L PP + A L+++ AL ++++T LG L L + P + KM+ FA +
Sbjct: 870 GDFLKKALQPPPLDAVIEAEHTLKEMKALDKNDELTPLGSILARLPIEPRLGKMMIFACV 929
Query: 787 MDCLDPALTLACASDYR--------DPFTLPISPNEKKRATAAKFELASLYGGQSDQLAV 838
+ L C++ DPF L P +++R + + A+ Y SD LA
Sbjct: 930 FN-------LGCSAAILASAASLGCDPFLL---PPDRRRLSNEQRRFAAGY--SSDHLAG 977
Query: 839 IAAFECWKNAK-QRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSC 895
+ F+ W + + +RG++A + C + ++ + ++ Q++ LI F E +S
Sbjct: 978 LNIFQVWTSERARRGEQAADFMCDRCELNGPALRIMEDAGNQIRMILINLTFPEESLSDS 1037
Query: 896 SHNARVPG-----IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKL 950
N V ++ ++L GLYP + H + R+ + T G H S+N
Sbjct: 1038 GINFNVSNNIDCDMLSSLLTLGLYPNICY----HVDKRKLL-TMEGTVALTHKGSVNCSN 1092
Query: 951 SFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDDEDDDM 1010
K D P V+DE R + + T+V PL L+L A
Sbjct: 1093 VAIKFDH-PFFVFDEKIRTQ-AVSCKGLTMVNPLQLMLFGCRTATW-------------- 1136
Query: 1011 SDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCL 1070
D D N S D+ TV++D W+ A+I+ L
Sbjct: 1137 --KDGDPNSS-----------------------DRGGTVLLDDWIPLKMEFASAARIFAL 1171
Query: 1071 RERLSVAILFKVTHPQKALPP 1091
R L ++ P++ P
Sbjct: 1172 RPALEALLVRACMRPEQLAEP 1192
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 152/229 (66%), Gaps = 19/229 (8%)
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLE-HI 229
R + + NLR ++++R++LP+ S++ I + ++V LI GETGCGKTTQ+PQF+L+ +I
Sbjct: 424 RFDNEPNLRSLLDDRAQLPVHSYRHSIMDAITHSRVTLIRGETGCGKTTQIPQFILDTYI 483
Query: 230 WS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCT 287
S +G C ++ TQPRRISA S+AERI+ ERGE +G ++GY +R E+ + + SI+FCT
Sbjct: 484 ESGRGAECAVLVTQPRRISAISLAERIAYERGEAVGMSVGYSVRFETVHPRPYGSILFCT 543
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G + R + S + ++HI+VDEIHERD +DFML ++RDM+ ++
Sbjct: 544 VGTMARKMES----------------GLRGVSHIVVDEIHERDVNTDFMLILLRDMIQAH 587
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LRLILMSAT+D F YFG C V + G T+PV+ ++LED + +L
Sbjct: 588 RDLRLILMSATIDTTMFVDYFGECTVFDIEGRTHPVEHYFLEDCIKMLN 636
>gi|350636500|gb|EHA24860.1| hypothetical protein ASPNIDRAFT_40783 [Aspergillus niger ATCC 1015]
Length = 1348
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 160/505 (31%), Positives = 253/505 (50%), Gaps = 48/505 (9%)
Query: 519 ENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKI--CMDSEDGAILVFLPGWEDINK 576
E+A+S + + L K L ++ I+ LI +R I + + G IL+FLPG +I +
Sbjct: 787 EDAVSSAQADESLGKVLRSLGMG-INYELIASTVRYIDAQLGDQPGGILIFLPGTMEIER 845
Query: 577 TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
+ + P +PLH+ + +Q++VF PP G RK+I +TN+AET+ITI+D
Sbjct: 846 CLNAVKRIPNAHP------LPLHASLLPAEQRRVFLSPPKGKRKVIAATNVAETSITIED 899
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
+V VID+GR+KE SYDP +N+ LQ W S+A+ KQR GRAGR +AGICY LY++ A+
Sbjct: 900 IVAVIDTGRVKETSYDPRDNIVRLQEVWASQAACKQRRGRAGRVRAGICYKLYTRKAEAN 959
Query: 697 LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS 756
+ PEI+R+P+E+LCL VK + ++ FL T+ PP S + A+ L +GAL
Sbjct: 960 MAQRPDPEIRRVPLEQLCLSVKAMQGINDVATFLANTITPPESTAVEGALDFLHRVGALD 1019
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
D K+T LG L + +K++ + + C+D +T++ + PF +SP EK+
Sbjct: 1020 HD-KLTALGRYLSMIPADLRCAKLMVYGSIFSCIDACVTISAILTVKSPF---VSPREKR 1075
Query: 817 -RATAAKFELASLYGGQSDQLAVIAAFECWK---NAKQRGQEAWFCSQYFVSSGVMNMLL 872
A AAK + G D L + A++ W NA+ Q +CS F+S + +
Sbjct: 1076 EEANAAKASFSK--GADGDLLTDLLAYQQWSDRVNAQGYWQTQSWCSANFLSHQTLRDIS 1133
Query: 873 GMRKQLQTELIKNGFIPEDVSSC------SHNARVPGIIHAVLMAGLYPMVARLRPPHKN 926
+ QL T L G +P D SS + NA ++ A++ P +A++ P K
Sbjct: 1134 SNKSQLLTSLKDAGLLPVDYSSSDPSSRWNRNASNKPLLRALIAGAFQPQIAQISFPDK- 1192
Query: 927 GRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDDCPLMVYDEITR 968
+F + G +V +HP S+ F + L + ++
Sbjct: 1193 --KFASSVTGTVEIDPDARTIKYFNQENGRVFIHPSSVCFSAQSYPSSSAYLSYFTKM-- 1248
Query: 969 GDGGMHVRNCTVVGPLPLLLLATEI 993
+ VR+ T LLL I
Sbjct: 1249 ATSKVFVRDLTPFNAYSLLLFCGSI 1273
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 140/220 (63%), Gaps = 12/220 (5%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
+++ +R LP + +D I V+ QV +ISGETG GK+TQ QFLL+ + + G
Sbjct: 557 QEMTRKRQALPAWNTQDAIIQAVNKYQVTIISGETGSGKSTQSVQFLLDDLIKRDLGAAA 616
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLL 295
I+CTQPRRISA +A+R+S ER ++GD +GY IR ESK ++ I F T GVLLR +
Sbjct: 617 NIICTQPRRISALGLADRVSDERCASVGDEVGYIIRGESKAKAGTTKITFVTTGVLLRRM 676
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
S AS+ ++ +TH++VDE+HER +DF+LA++RD+L +++ILM
Sbjct: 677 QSGSGPDGNVASS------LADVTHVVVDEVHERSLDTDFLLALLRDVLRYRKDIKVILM 730
Query: 356 SATLDADRFSQYFGGCP---VIQVPGFTYPVKSFYLEDVL 392
SATLDAD F YFGG + +PG T+PV+ YL+D++
Sbjct: 731 SATLDADIFMNYFGGSKSVGFVNIPGRTFPVQDNYLDDII 770
>gi|145251327|ref|XP_001397177.1| DEAD/DEAH box helicase [Aspergillus niger CBS 513.88]
gi|134082709|emb|CAK42601.1| unnamed protein product [Aspergillus niger]
Length = 1348
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 160/505 (31%), Positives = 253/505 (50%), Gaps = 48/505 (9%)
Query: 519 ENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKI--CMDSEDGAILVFLPGWEDINK 576
E+A+S + + L K L ++ I+ LI +R I + + G IL+FLPG +I +
Sbjct: 787 EDAVSSAQADESLGKVLRSLGMG-INYELIASTVRYIDAQLGDQPGGILIFLPGTMEIER 845
Query: 577 TRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDD 636
+ + P +PLH+ + +Q++VF PP G RK+I +TN+AET+ITI+D
Sbjct: 846 CLNAVKRIPNAHP------LPLHASLLPAEQRRVFLSPPKGKRKVIAATNVAETSITIED 899
Query: 637 VVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS 696
+V VID+GR+KE SYDP +N+ LQ W S+A+ KQR GRAGR +AGICY LY++ A+
Sbjct: 900 IVAVIDTGRVKETSYDPRDNIVRLQEVWASQAACKQRRGRAGRVRAGICYKLYTRKAEAN 959
Query: 697 LPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALS 756
+ PEI+R+P+E+LCL VK + ++ FL T+ PP S + A+ L +GAL
Sbjct: 960 MAQRPDPEIRRVPLEQLCLSVKAMQGINDVATFLANTITPPESTAVEGALDFLHRVGALD 1019
Query: 757 LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKK 816
D K+T LG L + +K++ + + C+D +T++ + PF +SP EK+
Sbjct: 1020 HD-KLTALGRYLSMIPADLRCAKLMVYGSIFSCIDACVTISAILTAKSPF---VSPREKR 1075
Query: 817 -RATAAKFELASLYGGQSDQLAVIAAFECWK---NAKQRGQEAWFCSQYFVSSGVMNMLL 872
A AAK + G D L + A++ W NA+ Q +CS F+S + +
Sbjct: 1076 EEANAAKASFSK--GADGDLLTDLLAYQQWSDRVNAQGYWQTQSWCSANFLSHQTLRDIS 1133
Query: 873 GMRKQLQTELIKNGFIPEDVSSC------SHNARVPGIIHAVLMAGLYPMVARLRPPHKN 926
+ QL T L G +P D SS + NA ++ A++ P +A++ P K
Sbjct: 1134 SNKSQLLTSLKDAGLLPVDYSSSDPSSRWNRNASNKPLLRALIAGAFQPQIAQISFPDK- 1192
Query: 927 GRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDDCPLMVYDEITR 968
+F + G +V +HP S+ F + L + ++
Sbjct: 1193 --KFASSVTGTVEIDPDARTIKYFNQENGRVFIHPSSVCFSAQSYPSSSAYLSYFTKM-- 1248
Query: 969 GDGGMHVRNCTVVGPLPLLLLATEI 993
+ VR+ T LLL I
Sbjct: 1249 ATSKVFVRDLTPFNAYSLLLFCGSI 1273
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 140/220 (63%), Gaps = 12/220 (5%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETC 236
+++ +R LP + +D I V+ QV +ISGETG GK+TQ QFLL+ + + G
Sbjct: 557 QEMTRKRQALPAWNTQDAIIQAVNKYQVTIISGETGSGKSTQSVQFLLDDLIKRDLGAAA 616
Query: 237 KIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLL 295
I+CTQPRRISA +A+R+S ER ++GD +GY IR ESK ++ I F T GVLLR +
Sbjct: 617 NIICTQPRRISALGLADRVSDERCASVGDEVGYIIRGESKAKAGTTKITFVTTGVLLRRM 676
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
S AS+ ++ +TH++VDE+HER +DF+LA++RD+L +++ILM
Sbjct: 677 QSGSGPDGNVASS------LADVTHVVVDEVHERSLDTDFLLALLRDVLRYRKDIKVILM 730
Query: 356 SATLDADRFSQYFGGCP---VIQVPGFTYPVKSFYLEDVL 392
SATLDAD F YFGG + +PG T+PV+ YL+D++
Sbjct: 731 SATLDADIFMNYFGGSKSVGFVNIPGRTFPVQDNYLDDII 770
>gi|239606435|gb|EEQ83422.1| ATP dependent RNA helicase [Ajellomyces dermatitidis ER-3]
Length = 1466
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 223/439 (50%), Gaps = 51/439 (11%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI LL I E AILVF+PG +I + D +L+ F + ++I L
Sbjct: 924 LDYKLIVSLLSAIATKKEFKQYSKAILVFMPGMAEIRRLNDEILSESLF-NKGDWIIHAL 982
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 983 HSSIASEDQEKAFLIPPIGMRKIVIATNIAETGITIPDITAVIDTGKEKVMRFDERRQLS 1042
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L S++++A+AKQR GRAGR Q+G+C+HL+++ R L + Q PEI R+ +++L L+V
Sbjct: 1043 KLVESFIARANAKQRRGRAGRVQSGLCFHLFTKFRHDQLLSEQQTPEILRLSLQDLVLRV 1102
Query: 718 KLLDPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
K+ CN +E L + +DPP S IR AI L+++ AL+ E +T LG +L L +
Sbjct: 1103 KI----CNLGEVEQTLSEAIDPPSSKNIRRAIEALKEVKALTNAENLTPLGRQLAKLPLD 1158
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY--GGQ 832
+ K++ + CLD A+++A + PF + ++ + ELA L G
Sbjct: 1159 VFLGKLIIYGAFFKCLDSAVSIAAILSSKSPFITAV-------GSSTQRELAKLVFKRGN 1211
Query: 833 SDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
SD L V A+ WK + E FC + ++S + + ++ QL ++ G +
Sbjct: 1212 SDLLTVYNAYLAWKRHRSTPGMSEYAFCRKNYLSPQTLLNIEDVKMQLLVSIVDAGLLSL 1271
Query: 891 DVSSCSHNAR------------VPG----------IIHAVLMAGLYPMVARLRPPHKNGR 928
D + AR VP II++V+ YP + + G+
Sbjct: 1272 DRAEQESLARSRFTGRQRQFFTVPKRVDINSENDIIINSVIAWSFYPKLL-----IREGK 1326
Query: 929 RFVETAGGAKVRLHPHSLN 947
+ A V LHP S+N
Sbjct: 1327 GWRNVANNQPVSLHPTSVN 1345
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 152/253 (60%), Gaps = 34/253 (13%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LPI FKD I T+ +NQ ++I ETG GK+TQVP F+LE G CKI T+PR
Sbjct: 668 RKSLPIWQFKDHILDTLAANQAIIICSETGSGKSTQVPSFILEKELLSGHDCKIYVTEPR 727
Query: 245 RISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E GE+ +G + +GY IRLESK + ++F T GV++R+L
Sbjct: 728 RISAMSLAKRVSEELGEDKNAVGTSRSLVGYAIRLESKISSSTRLIFATTGVVVRML--- 784
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
+P D +TH+++DE+HER SDF+L I+R ++ P L+L+LMSAT
Sbjct: 785 ---------ERPK--DFQDITHLVLDEVHERTIDSDFLLIILRRLMQERPDLKLVLMSAT 833
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNED--PE 416
+DA RFS+Y G P++ +PG T+PV+ YLED + + K PN D
Sbjct: 834 VDATRFSKYLHGAPILDIPGRTFPVEVKYLEDAIEVTKHR------------PNSDGLSA 881
Query: 417 LTEENKSTLDEAI 429
LT+++ + DEA+
Sbjct: 882 LTDDSDDSHDEAL 894
>gi|312377845|gb|EFR24578.1| hypothetical protein AND_10727 [Anopheles darlingi]
Length = 1059
Score = 216 bits (550), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 152/229 (66%), Gaps = 19/229 (8%)
Query: 170 SRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI 229
SRI D +L+ +E R KLPI++ +D I T+ N VVLI G TGCGKTTQ+ QF+LE
Sbjct: 161 SRIAGDKSLQMSLEARGKLPIAAMRDEIMRTIYDNPVVLIRGSTGCGKTTQIAQFILEDY 220
Query: 230 WSKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFC 286
+ G+ C + TQPRRISA SV+ERI+ ER EN+G +GY +R ++ + + SI+FC
Sbjct: 221 INSGQGAYCNVCVTQPRRISAVSVSERIANERCENLGVAVGYAVRFDAVLPRAYGSILFC 280
Query: 287 TNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPS 346
T GVLLR L S + ++H+IVDEIHERD SDF+L ++RDM+ +
Sbjct: 281 TIGVLLRRLES----------------GLRGVSHVIVDEIHERDVNSDFLLVVLRDMVHT 324
Query: 347 YPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSIL 395
YP LR+ILMSAT+D F++YFG CPV+QV G T+ V+ +LED + +L
Sbjct: 325 YPDLRVILMSATIDTTMFARYFGDCPVLQVEGRTFRVQQLFLEDCIELL 373
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 230/461 (49%), Gaps = 36/461 (7%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
LI+ L+ I GA+LVFLPGW I L + V++PLHS +P
Sbjct: 457 LIDSLIDYIDRQGRPGAVLVFLPGWNLIFGLMKHL------QPRRNLVVLPLHSQLPRDD 510
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
Q+KVF RK+IL+TNIAET+ITIDDVVYVID+ + + K + +NN+++ + W +
Sbjct: 511 QRKVFAHYGQQ-RKVILATNIAETSITIDDVVYVIDTCKARMKMFTSHNNMTSYATVWAA 569
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 726
K + +QR GRAGR G+C+ L S+ R L + PE+ R P+ EL L +KLL I
Sbjct: 570 KTNLEQRKGRAGRVSPGMCFTLCSRARFERLEENLTPEMFRTPLHELALSIKLLRLGA-I 628
Query: 727 EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAIL 786
FL K ++PP T+ A ++L+++ L E++T G L L + P + KM+ + L
Sbjct: 629 GQFLSKAIEPPPLDTVIEAEMLLKEMKCLDEKEQLTPFGRILARLPIEPRLGKMMVLSTL 688
Query: 787 MDCLDPALTLAC-ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW 845
DP T+A +S + + F L + +++ A+ + ++Y SD +A+I AFE W
Sbjct: 689 FGLCDPITTMAAYSSTFSEIFQLEV--GQRRLASYQRALAGNMY---SDYVAMIVAFEMW 743
Query: 846 KNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP- 902
+ +EA FC + + + ++QL LI+ GF + + + P
Sbjct: 744 SRKRNISEEAEIRFCEWKGLQLSTLRTIAEAKRQLLDNLIQAGFPEGSMQVQRFDTQSPD 803
Query: 903 ---GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK-------LSF 952
+ A+L GLYP V H+ RR + T A + +H S+N ++
Sbjct: 804 EELAMTMALLCVGLYPNVCL----HREKRRVLTTESKAAI-IHKTSVNCGGNNSNNIMAS 858
Query: 953 KKTDDC---PLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
C P V+ E R + + ++V P+ LLL
Sbjct: 859 SSAGTCFPYPFFVFGEKIRTR-AVSCKQMSMVAPIQLLLFG 898
>gi|261190290|ref|XP_002621555.1| ATP dependent RNA helicase [Ajellomyces dermatitidis SLH14081]
gi|239591383|gb|EEQ73964.1| ATP dependent RNA helicase [Ajellomyces dermatitidis SLH14081]
Length = 1466
Score = 216 bits (550), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 223/439 (50%), Gaps = 51/439 (11%)
Query: 543 IDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPL 598
+D LI LL I E AILVF+PG +I + D +L+ F + ++I L
Sbjct: 924 LDYKLIVSLLSAIATKKEFKQYSKAILVFMPGMAEIRRLNDEILSESLF-NKGDWIIHAL 982
Query: 599 HSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVS 658
HS + S Q+K F PP G RKI+++TNIAET ITI D+ VID+G+ K +D +S
Sbjct: 983 HSSIASEDQEKAFLIPPIGMRKIVIATNIAETGITIPDITAVIDTGKEKVMRFDERRQLS 1042
Query: 659 TLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAAS-LPDFQVPEIKRIPIEELCLQV 717
L S++++A+AKQR GRAGR Q+G+C+HL+++ R L + Q PEI R+ +++L L+V
Sbjct: 1043 KLVESFIARANAKQRRGRAGRVQSGLCFHLFTKFRHDQLLSEQQTPEILRLSLQDLVLRV 1102
Query: 718 KLLDPNCN---IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
K+ CN +E L + +DPP S IR AI L+++ AL+ E +T LG +L L +
Sbjct: 1103 KI----CNLGEVEQTLSEAIDPPSSKNIRRAIEALKEVKALTNAENLTPLGRQLAKLPLD 1158
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY--GGQ 832
+ K++ + CLD A+++A + PF + ++ + ELA L G
Sbjct: 1159 VFLGKLIIYGAFFKCLDSAVSIAAILSSKSPFITTV-------GSSTQRELAKLVFKRGN 1211
Query: 833 SDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
SD L V A+ WK + E FC + ++S + + ++ QL ++ G +
Sbjct: 1212 SDLLTVYNAYLAWKRHRSTPGMSEYAFCRKNYLSPQTLLNIEDVKMQLLVSIVDAGLLSL 1271
Query: 891 DVSSCSHNAR------------VPG----------IIHAVLMAGLYPMVARLRPPHKNGR 928
D + AR VP II++V+ YP + + G+
Sbjct: 1272 DRAEQESLARSRFTGRQRQFFTVPKRVDINSENDIIINSVIAWSFYPKLL-----IREGK 1326
Query: 929 RFVETAGGAKVRLHPHSLN 947
+ A V LHP S+N
Sbjct: 1327 GWRNVANNQPVSLHPTSVN 1345
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 152/253 (60%), Gaps = 34/253 (13%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R LPI FKD I T+ +NQ ++I ETG GK+TQVP F+LE G CKI T+PR
Sbjct: 668 RKSLPIWQFKDHILDTLAANQAIIICSETGSGKSTQVPSFILEKELLSGHDCKIYVTEPR 727
Query: 245 RISATSVAERISVERGEN---IGDN---IGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
RISA S+A+R+S E GE+ +G + +GY IRLESK + ++F T GV++R+L
Sbjct: 728 RISAMSLAKRVSEELGEDKNAVGTSRSLVGYAIRLESKISSSTRLIFATTGVVVRML--- 784
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
+P D +TH+++DE+HER SDF+L I+R ++ P L+L+LMSAT
Sbjct: 785 ---------ERPK--DFQDITHLVLDEVHERTIDSDFLLIILRRLMQERPDLKLVLMSAT 833
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNED--PE 416
+DA RFS+Y G P++ +PG T+PV+ YLED + + K PN D
Sbjct: 834 VDATRFSKYLHGAPILDIPGRTFPVEVKYLEDAIEVTKHR------------PNSDGLSA 881
Query: 417 LTEENKSTLDEAI 429
LT+++ + DEA+
Sbjct: 882 LTDDSDDSHDEAL 894
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,016,741,839
Number of Sequences: 23463169
Number of extensions: 815063261
Number of successful extensions: 5138545
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10100
Number of HSP's successfully gapped in prelim test: 1562
Number of HSP's that attempted gapping in prelim test: 4998171
Number of HSP's gapped (non-prelim): 82380
length of query: 1225
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 1071
effective length of database: 8,745,867,341
effective search space: 9366823922211
effective search space used: 9366823922211
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)