BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000916
(1225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2
PE=1 SV=2
Length = 1430
Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/1178 (34%), Positives = 620/1178 (52%), Gaps = 149/1178 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 41 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 100
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 101 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 149
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + +I + R LP+ ++ I +
Sbjct: 150 RGNVFAVEAENREMSKT--SGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 207
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 267
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 268 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 314
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS------LI 409
VK +LED+L +LK SA+ N S L
Sbjct: 375 VKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPESQRQRTVLN 434
Query: 410 VPNED-----------PELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
V +E +LTE++ + L D +S W + + D ++ L +
Sbjct: 435 VTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILT 494
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 495 ENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 554
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 555 IVDLLESYSATLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 614
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GA+L+FLPG+++I RDR+L + F T ++ + LHS + + QKKV
Sbjct: 615 NICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVL 674
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 675 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 734
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 735 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 794
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 795 MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 854
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 855 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARS 912
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 913 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 972
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + V T KVR HP S+ + +KK
Sbjct: 973 AALVAGMYPNLV-----HVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAI 1027
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1028 KALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRVDG 1084
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++DKT+ + +D WL+F + +
Sbjct: 1085 IPNDSSDS--------EMEDKTTANLA-----------ALKLDEWLHFTLEPEAASLLLQ 1125
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYD 1107
LR++ L ++ P K V EA++ A+ ++LS +
Sbjct: 1126 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTE 1163
>sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2
PE=2 SV=1
Length = 1445
Score = 634 bits (1636), Expect = e-180, Method: Compositional matrix adjust.
Identities = 403/1188 (33%), Positives = 624/1188 (52%), Gaps = 150/1188 (12%)
Query: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
+ E +I ++ L+ F F ++L++ ERA +H + + +G+ SKS G+G R +
Sbjct: 56 IDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYL 115
Query: 84 SVCKSKKRVETDKGKEILPSLTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
+V K+ + + + + + +K ++ L +P + E E L +
Sbjct: 116 TV----KKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTE------- 164
Query: 144 RGKRVDIFCKPK-MSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVD 202
RG + + + MSK + ++ + ++ + R LP+ ++ I +
Sbjct: 165 RGNVFAVEAENREMSKT--SGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIK 222
Query: 203 SNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGEN 262
N+VVLI GETG GKTTQ+PQFLL+ + G C+I CTQPRR++A +VAER++ ER E
Sbjct: 223 ENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRER 282
Query: 263 IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHII 322
IG IGY+IRLES+ + + FCTNGVLLR L++ +S +TH+I
Sbjct: 283 IGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA-------------GDSTLSTVTHVI 329
Query: 323 VDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYP 382
VDE+HERDR+SDF+L +RD+L +P L+LIL SA LD + F +YFG CPVI + G +
Sbjct: 330 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 389
Query: 383 VKSFYLEDVL--------SILK-------------------SAESNHLDSAS-------- 407
VK +LED+L +LK SA+ N S
Sbjct: 390 VKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRAVAS 449
Query: 408 ------LIVPNEDP---ELTEENKSTL--------DEAISLAWSNDEFDMLLELVSLEGS 450
L+ D +LTE++ + L D +S W + + D ++ L +
Sbjct: 450 VSEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILT 509
Query: 451 PNV-YNYQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQENQPE 509
NV +Y+H+ T T LMV AG+G V L+S+GA+ KA +G AL + Q E
Sbjct: 510 ENVSVDYRHSETSATALMVAAGRGFTSQVEQLISMGANVHSKASNGWMALDWAKHFGQTE 569
Query: 510 VAQIIKKH-----MENALSDSMKQ-----------QLLDKYLATVNPELIDLVLIEQLLR 553
+ +++ + N S+ Q +LL Y + + E +DL LI LL
Sbjct: 570 IVDLLESYSASLEFGNLDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLY 629
Query: 554 KICMDSEDGAILVFLPGWEDINKTRDRLLANP--FFRDTSKFVIIPLHSMVPSVQQKKVF 611
IC + GAIL+FLPG+++I RDR+L + F +T ++ + LHS + + QKKV
Sbjct: 630 NICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 689
Query: 612 KRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAK 671
K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA
Sbjct: 690 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 749
Query: 672 QRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFL 730
QR GRAGRC+ GIC+ L+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I DFL
Sbjct: 750 QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFL 809
Query: 731 QKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
K +PP ++ +RNA+ +L+ I A+ E +TELG L L V P + KM+ A+++ CL
Sbjct: 810 MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 869
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
DP LT+AC YRDPF LP ++K+ A + + G SD +A++ AF+ W+ A+
Sbjct: 870 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 927
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE----DVSSCSHNARVPGIIH 906
G E FC + F+S M +++GMR QL +L +GF+ D+ + N+ ++
Sbjct: 928 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 987
Query: 907 AVLMAGLYPMVARLRPPHKNGRRFVETA-GGAKVRLHPHSLNFKLSFKK----------- 954
A L+AG+YP + H + + T KVR HP S+ + +KK
Sbjct: 988 AALVAGMYPNLV-----HVDRENVILTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAI 1042
Query: 955 ----TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDD 1009
TD ++YDE+TR ++R C+ V P+ +L+ +A E D
Sbjct: 1043 QALPTD---WLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRADG 1099
Query: 1010 MSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYC 1069
+ +D +D E++D+T+ + +D WL F + +
Sbjct: 1100 IPNDSSDS--------EMEDRTTANLA-----------ALKLDEWLNFKLEPEAASLLLQ 1140
Query: 1070 LRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFS-GISLPA 1116
LR++ L ++ P K V EA++ A+ ++LS + S G+ P+
Sbjct: 1141 LRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPS 1188
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 297/476 (62%), Gaps = 19/476 (3%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
L ++ + +DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+
Sbjct: 455 LQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFL 513
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D
Sbjct: 514 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 573
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN+ST+ + WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELC
Sbjct: 574 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 633
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
LQ+K+L I FL + +DPP + + +I L ++ AL E++T LG L L V
Sbjct: 634 LQIKILRLG-GIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 692
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P + KM+ F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD
Sbjct: 693 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--ETRSD 748
Query: 835 QLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---- 888
L V+ AFE W+ AK+RG E +C +YF+SS + ML M+ Q L+ GF+
Sbjct: 749 HLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 808
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSL 946
P+D + N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+
Sbjct: 809 PKD-PKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSV 867
Query: 947 NFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
N ++TD + + +++ +CT V P LL +I++ D E
Sbjct: 868 N----VEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQE 919
Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 153/217 (70%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + ++++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 197 RKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 256
Query: 243 PRRISATSVAERISVERGENIGD--NIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G+ + GY+IRL+S+ K SI++CT G++L+ L Q
Sbjct: 257 PRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL--QS 314
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
SRL S+++HI++DEIHER+ SD ++ +I+D+L L++ILMSATL
Sbjct: 315 DSRL------------SSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATL 362
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LED++ ++
Sbjct: 363 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 399
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 294/468 (62%), Gaps = 19/468 (4%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL LI L+R I ++ EDGAILVFLPGW++I+ D L++ F+ + KF+IIPLHS++
Sbjct: 470 VDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK-SDKFLIIPLHSLM 528
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ +
Sbjct: 529 PTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVSKA+AKQR GRAGR Q G CYHLY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L
Sbjct: 589 EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRL 648
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
I FL + +DPP + + +I L ++ AL E++T LG L L V P + KM+
Sbjct: 649 G-GIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 783 FAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAF 842
F L CLDP LT+A + ++DPF +P+ ++K A A + ELA +SD L V+ AF
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPLG--KEKIADARRKELAK--DTRSDHLTVVNAF 763
Query: 843 ECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI----PEDVSSCS 896
E W+ A++RG E +C +YF+SS + ML M+ Q L+ GF+ P+D S +
Sbjct: 764 EGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-N 822
Query: 897 HNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVE--TAGGAKVRLHPHSLNFKLSFKK 954
N+ II AV+ AGLYP VA++R R+ V+ T V +HP S+N ++
Sbjct: 823 INSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVN----VEQ 878
Query: 955 TDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPDNE 1002
TD + + +++ +CT V P LL +I++ D E
Sbjct: 879 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE 926
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 151/217 (69%), Gaps = 19/217 (8%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKIVCTQ 242
R KLP + + + +D++QV +ISGETGCGKTTQV QF+L++ KG C+IVCTQ
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQ 263
Query: 243 PRRISATSVAERISVERGENIG--DNIGYKIRLESK-GGKHSSIVFCTNGVLLRLLVSQG 299
PRRISA SVAER++ ER E+ G ++ GY+IRL+S+ K SI++CT G++L+ L S
Sbjct: 264 PRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP 323
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+S+++HI++DEIHER+ SD ++ +++D+L L++ILMSATL
Sbjct: 324 Y--------------LSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATL 369
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
+A++FS+YFG CP+I +PGFT+PV + LEDV+ ++
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
>sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57
PE=1 SV=2
Length = 1386
Score = 297 bits (761), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 315/563 (55%), Gaps = 74/563 (13%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMK--QQLLDKY----------LA 536
+LKA+ RTA + E++ + + + +++A+ D +QLL +Y ++
Sbjct: 760 KLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 819
Query: 537 TVNPELIDLVLIEQLLRKICMDSED---GAILVFLPGWEDINKTRDRLLANPFF--RDTS 591
++ E ++L LIE LL I GAILVFLPG +I ++L +N F R ++
Sbjct: 820 IMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 879
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
+ VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK Y
Sbjct: 880 RCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 939
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDFQVPEIKRIPI 710
D + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L Q+PEI+R+P+
Sbjct: 940 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 999
Query: 711 EELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
E+LCL++K+L+ N++ + ++PP + ++R + I L+D+GAL+ DE++T LG L
Sbjct: 1000 EQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHL 1059
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
L V + K++ F + CLDPALT+A + ++ PF P ++K+ A K E A
Sbjct: 1060 ASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEANQKKLEFA-- 1115
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKN- 885
SD LA++ A++ W+ + + G A +C Q F+S V+ + +++Q TEL+ +
Sbjct: 1116 -FANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQF-TELLSDI 1173
Query: 886 GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYPMVARLRPPHK 925
GF E + + + NA P +I A+L A LYP V +++ P
Sbjct: 1174 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1233
Query: 926 NGRRFVETAGGA------------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEIT 967
+F +T+ GA V +HP S+N+++ + D P ++Y E
Sbjct: 1234 ---KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFDSPYLLYHEKI 1287
Query: 968 RGDGGMHVRNCTVVGPLPLLLLA 990
+ + +R+C++V PL+L
Sbjct: 1288 K-TSRVFIRDCSMVSVYPLVLFG 1309
Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 16/221 (7%)
Query: 178 LRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GET 235
+ I++ER LP ++ I + + +QVV+ISG TGCGKTTQ+PQF+L+ + +
Sbjct: 534 FQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKV 593
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L
Sbjct: 594 ANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL 653
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+G + L+ ++HIIVDE+HER SDF+L +++D++ P L++ILM
Sbjct: 654 --EGDTALQ------------GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILM 699
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
SATL+A+ FS YF CPVI +PG T+PV F+LED +++ +
Sbjct: 700 SATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 740
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 290 bits (741), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 314/573 (54%), Gaps = 93/573 (16%)
Query: 489 QLKAKDGRTALQLGEQENQPEVAQIIKKHM-----ENALSDSMKQQLLD----------- 532
+LKA+ RTA Q EV + ++ + E ++ D++ Q LD
Sbjct: 761 KLKARHNRTA--------QEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGV 812
Query: 533 -----KYLATVNPELIDLVLIEQLLRKICMDSED----GAILVFLPGWEDINKTRDRLLA 583
K ++ ++ E ++L LIE LL I +D + GA+LVFLPG +I ++L +
Sbjct: 813 SKSVIKTMSVMDFEKVNLELIEALLEWI-VDGKHAYPPGAVLVFLPGLAEIKMLYEQLQS 871
Query: 584 NPFF--RDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVI 641
N F R + + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVI
Sbjct: 872 NSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVI 931
Query: 642 DSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLY-SQLRAASLPDF 700
DSG+MKEK YD + +L+ ++VS+A+A QR GRAGR +G+C+HL+ S L
Sbjct: 932 DSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQ 991
Query: 701 QVPEIKRIPIEELCLQVKLLD--PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLD 758
Q+PEI+R+P+E+LCL++K+L+ N++ + ++PP ++R + + L+D+GAL+ D
Sbjct: 992 QLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPD 1051
Query: 759 EKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRA 818
EK+T LG L L V + K++ + CLDPALT+A + ++ PF P ++K+ A
Sbjct: 1052 EKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPW--DKKEEA 1109
Query: 819 TAAKFELASLYGGQSDQLAVIAAFECWK-NAKQRGQEAW-FCSQYFVSSGVMNMLLGMRK 876
K E A SD LA++ A++ W+ + K+ + ++ +C Q F+S + + +++
Sbjct: 1110 NQKKLEFAF---ANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKR 1166
Query: 877 QLQTELIKN-GFIPEDVSS--------------------CSHNARVPGIIHAVLMAGLYP 915
Q TEL+ + GF+ E + + + NA P +I AVL A LYP
Sbjct: 1167 QF-TELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYP 1225
Query: 916 MVARLRPPHKNGRRFVETAGG------------------AKVRLHPHSLNFKLSFKKTDD 957
V +++ P +F +T+ G V +HP S+N+++ + D
Sbjct: 1226 NVVQVKTPEG---KFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQV---RHFD 1279
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
P ++Y E + + +R+C++V PL+L
Sbjct: 1280 SPYLLYHEKIK-TSRVFIRDCSMVSVYPLVLFG 1311
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 144/218 (66%), Gaps = 16/218 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSK--GETCKI 238
I++ER LP ++ I + +QVV+ISG TGCGKTTQ+PQF+L++ + I
Sbjct: 538 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 597
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
+CTQPRRISA SVAER++ ER E +G +GY+IRLES + +++CT GVLLR L +
Sbjct: 598 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRL--E 655
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + L+ +THIIVDE+HER SDF+L +++D++ L++ILMSAT
Sbjct: 656 GDATLQ------------GVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 703
Query: 359 LDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILK 396
LDA FS+YF CPVI +PG +PV F+LED L++ +
Sbjct: 704 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTR 741
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 267/492 (54%), Gaps = 33/492 (6%)
Query: 542 LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSM 601
++DL LI L+ +I E G IL FLPGW++I + RLL S+++++P+HS
Sbjct: 692 VLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM-LGSQNSRYLVLPVHSN 750
Query: 602 VPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 661
+P + Q+ +F+RPPPG RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L+
Sbjct: 751 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 810
Query: 662 SSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 721
+ WVSK++ QR GRAGRCQ+G YHL+ + R +P +QVPEI R P+E L +Q K+
Sbjct: 811 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHM 870
Query: 722 PNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKML 781
P +FL K LD P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 871 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAI 930
Query: 782 FFAILMDCLDPALTL-ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIA 840
A + CL P L + +C + RDPF S + + RA K + SD LA +
Sbjct: 931 VLASIYRCLHPLLVIVSCLT--RDPF----SSSLQNRAEVDKAKAVLSRESGSDHLAFVR 984
Query: 841 AFECWKNA-KQRGQEAW--FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI--PEDV--- 892
A W+ ++R A + Y++ + + G+ KQ L + + P D
Sbjct: 985 AVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMP 1044
Query: 893 -SSCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
S C+ + ++ VLMAGLYP + ++R + G+ + V LH +
Sbjct: 1045 SSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRTKAGTVLLHKST 1104
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA-TEIAVAPAPDNEDD 1004
+N + S + + Y + +GG+ VR+ + V PL +LL+ T+I V DD
Sbjct: 1105 INREASKLYSR---WLTYFMAVKSNGGVFVRDSSQVHPLAVLLMTDTDIHV------RDD 1155
Query: 1005 DEDDDMSDDDAD 1016
+S D+D
Sbjct: 1156 GWRATVSLTDSD 1167
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 152/225 (67%), Gaps = 17/225 (7%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEH--IWSKGETCKIVC 240
+E LP+ KD I S ++ N VV+I+G+TGCGKTT++PQ LLEH + +G C +V
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVI 532
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVSQG 299
TQPRRISA SVA+R++ E G N+ N+GY++RLESK + +++FCT G+LLR L QG
Sbjct: 533 TQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKL--QG 590
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
P+ + VS H++VDE+HERD +DF+L +++ + P LRL+LMSAT
Sbjct: 591 ---------NPSLEGVS---HVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATG 638
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLD 404
D RFS YFGGCPV++VPGF YPVK +YLE++L+ L H +
Sbjct: 639 DNQRFSHYFGGCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYE 683
>sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2
Length = 1369
Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 41/482 (8%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + +GA+L+FLPG I + D LL+N + ++
Sbjct: 840 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYD-LLSNDRRFYSERY 898
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 899 KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE 958
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L ++VSKASA QR GRAGR + G C+ +Y++ R D+ VPEI R+P+EEL
Sbjct: 959 SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEEL 1018
Query: 714 CLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLG 769
CL + CN+ EDFL K LDPP I NA+ +L+ IGA L+E K+T LG+ L
Sbjct: 1019 CLHIM----KCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1074
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L V+ + KML F + CLDP TLA + PFT PI K A AK LA
Sbjct: 1075 ALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIG--RKDEADLAKSALAM-- 1130
Query: 830 GGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886
SD L + A+ WK A+Q G E +C + F++ + L ++++L + G
Sbjct: 1131 -ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1189
Query: 887 FIPEDVSSCSHNARVP--------GIIHAVLMAGLYPMVARLRPPH-----KNGRRFVET 933
F S+ R ++ AVL+AGLY V ++ + VET
Sbjct: 1190 FSSSTTSTSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVET 1249
Query: 934 AGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEI 993
A G K ++HP S+N L ++Y E R +++R T++ P P+LL +I
Sbjct: 1250 AQG-KAQVHPSSVNRDLQTHG-----WLLYQEKIRY-ARVYLRETTLITPFPVLLFGGDI 1302
Query: 994 AV 995
V
Sbjct: 1303 EV 1304
Score = 194 bits (492), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 165 VESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
V +L +++ +++++ER +LP+ +D I T+ ++VV+++GETG GK+TQVP F
Sbjct: 549 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 608
Query: 225 LLEHI----WSKGETCKIVCTQPRRISATSVAERISVERG-ENI--GDN--IGYKIRLES 275
LLE + W + C IVCTQPRRISA S+A R+ E G EN G N GY+IR+ES
Sbjct: 609 LLEDLLLNEW-EASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMES 667
Query: 276 KGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + + +++CT GVLLR L G+ +S ++H+IVDE+HER SDF
Sbjct: 668 RACESTRLLYCTTGVLLRKLQEDGL--------------LSNVSHVIVDEVHERSVQSDF 713
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+L I++++L L LILMSAT+D+++FS YF CP++++ G +YPV+ F+LED++
Sbjct: 714 LLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 770
>sp|A3KMI0|DHX29_XENLA ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1
Length = 1362
Score = 270 bits (691), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 177/478 (37%), Positives = 262/478 (54%), Gaps = 33/478 (6%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE----DGAILVFLPGWEDINKTRDRLLANPFFRDTSKF 593
+NP I+L LI +LL + + E +GA+L+FLPG DI + D L ++ F D ++
Sbjct: 834 MNPNKINLDLILELLVFLDISPEYRNVEGAVLIFLPGLADIQQLYDILSSDKRFHDRRRY 893
Query: 594 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDP 653
+I LHS++ S Q + F PP G RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 894 KLIALHSILSSQDQAEAFILPPAGTRKIVLATNIAETGITIPDVVFVIDAGRTKENRYHE 953
Query: 654 YNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEEL 713
+ +S+L +++SKASA QR GRAGR + G C+ LY++ R S ++ VPEI R+P+EEL
Sbjct: 954 SSQMSSLVETFISKASALQRQGRAGRVRNGYCFRLYTRERFESFMEYSVPEILRVPLEEL 1013
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEKLGCLS 772
CL + D + EDFL K LDPP I NA+ +L+ IGA L + K+T LG+ L L
Sbjct: 1014 CLHIMKCDLG-SPEDFLSKALDPPQLQVISNAMSLLRKIGACELSQPKLTPLGQHLAALP 1072
Query: 773 VHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQ 832
V+ + KML F + CLD TLA + PF PI EK RA AK +S+
Sbjct: 1073 VNVKIGKMLIFGAIFGCLDAVATLAATMTEKSPFVTPI--GEKDRADLAK---SSMAVAN 1127
Query: 833 SDQLAVIAAFECWKNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF-IP 889
SD + + A+ WK + G E +C + F++ + + ++++L + GF P
Sbjct: 1128 SDHVTIFRAYLGWKAIRPEGYAAEMSYCRKNFLNRKALLTIEDVKQELIRLVRAAGFECP 1187
Query: 890 EDVSSC-------SHNARVPGIIHAVLMAGLYPMVARLRPPH-----KNGRRFVETAGGA 937
V + + +A ++ A+L AGLY V ++ + VETA G
Sbjct: 1188 RSVEANGLSSAMKALSAEETSLLKAILTAGLYDNVGKILFTKSVDITEKLACIVETAQG- 1246
Query: 938 KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAV 995
K ++HP S+N L ++Y E + + +R T++ P P+LL +IAV
Sbjct: 1247 KAQVHPSSVNRDLQIYG-----WLLYQEKVKY-SKVFLRETTLISPFPVLLFGGDIAV 1298
Score = 189 bits (481), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 147/222 (66%), Gaps = 22/222 (9%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET--- 235
++++ +R +LP+ + + I T+ ++V++++GETG GK+TQVPQFLLE + G +
Sbjct: 557 KRLLNDREQLPVFARGNFILETLKRHRVIVVAGETGSGKSTQVPQFLLEDLLFNGGSPGK 616
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDN-----IGYKIRLESKGGKHSSIVFCTNGV 290
C IVCTQPRRISA S+A R+ E G + G GY+IR+ES+ G+ + +++CT G+
Sbjct: 617 CNIVCTQPRRISAMSLATRVCEELGCDSGPGGKNSLCGYQIRMESRTGEATRLLYCTTGI 676
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
LLR L Q S LK ++HIIVDE+HER SDF+L I+R++L L
Sbjct: 677 LLRKL--QEDSMLKN------------ISHIIVDEVHERTVQSDFLLIILREILHKRSDL 722
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
L+LMSAT+D ++FS YF CP+I++ G T+PV+ F+LEDV+
Sbjct: 723 HLVLMSATVDCEKFSSYFTHCPIIRISGRTFPVEVFHLEDVV 764
>sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1
Length = 1365
Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/485 (36%), Positives = 258/485 (53%), Gaps = 50/485 (10%)
Query: 538 VNPELIDLVLIEQLLRKICMDSE------DGAILVFLPGWEDINKTRDRLLANPFFRDTS 591
+NP I+L LI +LL + +D +GA+L+FLPG I + D L ++ F +
Sbjct: 839 MNPHKINLDLILELL--VYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFY-SE 895
Query: 592 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSY 651
++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y
Sbjct: 896 RYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 955
Query: 652 DPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIE 711
+ +S+L ++VSKASA QR GRAGR + G C+ LY++ R D+ VPEI R+P+E
Sbjct: 956 HESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLE 1015
Query: 712 ELCLQVKLLDPNCNI---EDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE-KVTELGEK 767
ELCL + C++ EDFL K LDPP I NA+ +L+ IGA +E K+T LG+
Sbjct: 1016 ELCLHIM----KCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQH 1071
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
L L V+ + KML F + CL+P TLA + PF PI R A +S
Sbjct: 1072 LAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG-----RKDEADLAKSS 1126
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRG---QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIK 884
L SD L + A+ WK A+Q G E +C + F++ + L ++++L +
Sbjct: 1127 LAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKA 1186
Query: 885 NGFIPEDVSSCSHNARVP---------GIIHAVLMAGLYPMVARLRPPH-----KNGRRF 930
GF SS S R ++ AVL AGLY V ++ +
Sbjct: 1187 AGF----SSSPSWEGRKGPQTLSFQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACM 1242
Query: 931 VETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
VETA G K ++HP S+N L ++Y E R +++R T++ P P+LL
Sbjct: 1243 VETAQG-KAQVHPSSVNRDLQ-----TYGWLLYQEKVRYT-RVYLRETTLITPFPVLLFG 1295
Query: 991 TEIAV 995
+I V
Sbjct: 1296 GDIEV 1300
Score = 189 bits (481), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 153/244 (62%), Gaps = 22/244 (9%)
Query: 157 SKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
+ AE V SL R++ +++++ER +LP+ +D I T+ ++VV+++GETG G
Sbjct: 540 TSAEDLAPVRSLFRRLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 599
Query: 217 KTTQVPQFLLEHIWSK---GETCKIVCTQPRRISATSVAERISVERGENIGDN-----IG 268
K+TQVP FLLE + C IVCTQPRRISA S+A R+ E G G G
Sbjct: 600 KSTQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCG 659
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y+IR+ES+ + + +++CT GVLLR L G+ ++ ++H+IVDE+HE
Sbjct: 660 YQIRMESRASESTRLLYCTTGVLLRKLQEDGL--------------LADVSHVIVDEVHE 705
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R SDF+L I++++L L LILMSAT+D+D+FS YF CP++++ G +YPV+ F+L
Sbjct: 706 RSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHL 765
Query: 389 EDVL 392
ED++
Sbjct: 766 EDIV 769
>sp|Q7L2E3|DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30
PE=1 SV=1
Length = 1194
Score = 263 bits (673), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 267/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 SITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 358 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>sp|Q5R607|DHX30_PONAB Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30
PE=2 SV=1
Length = 1194
Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 266/497 (53%), Gaps = 31/497 (6%)
Query: 514 IKKH-MENALSDSMKQQLLDKYLATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPG 570
+K+H +E+ L+ K Q L ++ + + +DL L+ L+ I E G IL FLPG
Sbjct: 618 VKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPG 677
Query: 571 WEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAET 630
W++I + RL SK++I+P+HS +P + QK +F++PP G RKI+L+TNIAET
Sbjct: 678 WQEIKGVQQRL-QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAET 736
Query: 631 AITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS 690
+ TI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G YHL+
Sbjct: 737 STTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP 796
Query: 691 QLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQ 750
+ R + FQVPEI R P+E L LQ K+ P +FL K +D P + A+I+LQ
Sbjct: 797 RSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 856
Query: 751 DIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPAL-TLACASDYRDPFTLP 809
+IG L E +T LG++L +S P ++K + A + CL P L ++C + RDPF
Sbjct: 857 EIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPF--- 911
Query: 810 ISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA---KQRGQEAWFCSQYFVSSG 866
S + + RA K + + SD LA + A W+ + R + + + +
Sbjct: 912 -SSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAP 970
Query: 867 VMNMLLGMRKQLQTELIKNGFI---PEDVS----SCSHNARVPGIIHAVLMAGLYPMVAR 919
+ + G+ KQ +E I F+ P D + C+ + ++ VLMAGLYP + +
Sbjct: 971 SLRFIHGLIKQF-SENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQ 1029
Query: 920 LRPPH--KNGR----RFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGM 973
+R + G+ + LH ++N + + ++ + Y + +G +
Sbjct: 1030 VRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSR---WLTYFMAVKSNGSV 1086
Query: 974 HVRNCTVVGPLPLLLLA 990
VR+ + V PL +LLL
Sbjct: 1087 FVRDSSQVHPLAVLLLT 1103
Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ HYP + P +L ++ K G D I KP + E A +V S
Sbjct: 358 IETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKPYVPLLE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E + +E +LP+ +D I + ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLH 637
>sp|Q2NKY8|DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30 PE=2
SV=1
Length = 1220
Score = 262 bits (669), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 251/464 (54%), Gaps = 28/464 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 734
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++
Sbjct: 735 PMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLET 794
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 795 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMP 854
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 855 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 914
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 915 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 968
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 969 VSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLA 1027
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1028 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1087
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1088 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1128
Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 151/225 (67%), Gaps = 17/225 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS--KGETCKI 238
+ +E +LP+ +D I + ++ + VV+I+G+TGCGKTT++PQ LLE + +G C +
Sbjct: 453 VWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNV 512
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCTNGVLLRLLVS 297
+ TQPRRISA SVA+R+S E G + N+G+++RLESK + +++FCT G+LLR L S
Sbjct: 513 IITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQS 572
Query: 298 QGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSA 357
P+ + VS H++VDE HERD +DF+L +++ + P LRL+LMSA
Sbjct: 573 N-----------PSLEGVS---HVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSA 618
Query: 358 TLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
T D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 619 TGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 663
>sp|Q5BJS0|DHX30_RAT Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus
GN=Dhx30 PE=1 SV=1
Length = 1194
Score = 260 bits (664), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 708
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 709 PMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 768
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 769 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 829 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 888
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 889 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 943 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 1001
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1002 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1061
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1062 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1103
Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 358 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 416
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 417 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 476
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 477 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 536
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 537 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 582
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 583 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 637
>sp|Q99PU8|DHX30_MOUSE Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30
PE=2 SV=1
Length = 1217
Score = 259 bits (663), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 251/465 (53%), Gaps = 28/465 (6%)
Query: 543 IDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMV 602
+DL L+ L+ I E G IL FLPGW++I + RL SK++I+P+HS +
Sbjct: 673 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL-QEALGMHESKYLILPVHSNI 731
Query: 603 PSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQS 662
P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++
Sbjct: 732 PMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLET 791
Query: 663 SWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 722
WVS+A+ QR GRAGRCQ+G YHL+ + R + FQVPEI R P+E L LQ K+ P
Sbjct: 792 VWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 851
Query: 723 NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLF 782
+FL K +D P + A+I+LQ+IG L E +T LG++L +S P ++K +
Sbjct: 852 EKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIV 911
Query: 783 FAILMDCLDPAL-TLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
A + CL P L ++C + RDPF S + + RA K + + SD LA + A
Sbjct: 912 LAAIFRCLHPLLVVVSCLT--RDPF----SSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 965
Query: 842 FECWKNA---KQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI---PEDVS-- 893
W+ + R + + + + + + G+ KQ +E I F+ P D +
Sbjct: 966 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQF-SENIYEAFLVGKPSDCTLP 1024
Query: 894 --SCSHNARVPGIIHAVLMAGLYPMVARLRPPH--KNGR----RFVETAGGAKVRLHPHS 945
C+ + ++ VLMAGLYP + ++R + G+ + LH +
Sbjct: 1025 SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKST 1084
Query: 946 LNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+N + + ++ + Y + +G + VR+ + V PL +LLL
Sbjct: 1085 INREATRLRSR---WLTYFMAVKSNGSVFVRDSSQVHPLAVLLLT 1126
Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 21/295 (7%)
Query: 114 LQDLFTHYPPDDG--EPGEKLDANQSRKSDKTRGKRVD-IFCKPKMSKAEIAMKVESLTS 170
++ +HYP D P +L ++ K G D I KP M +E A +V S
Sbjct: 381 IEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSE-AEEVRLSQS 439
Query: 171 RIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW 230
+E I +E +LP+ +D I S ++ + VV+ISG+TGCGKTT++PQ LLE
Sbjct: 440 LLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYV 499
Query: 231 S--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKG-GKHSSIVFCT 287
+ +G C ++ TQPRRISA SVA+R+S E G ++ N+G+++RLESK + +++FCT
Sbjct: 500 TEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCT 559
Query: 288 NGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSY 347
G+LLR L S P+ + VS H+IVDE+HERD +DF+L +++ +
Sbjct: 560 VGILLRKLQSN-----------PSLEGVS---HVIVDEVHERDVNTDFLLILLKGLQRLN 605
Query: 348 PHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNH 402
P LRL+LMSAT D +RFS+YFGGCPVI+VPGF YPVK YLED+L+ L + H
Sbjct: 606 PALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPH 660
>sp|Q5R874|DHX9_PONAB ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
Length = 1269
Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>sp|Q08211|DHX9_HUMAN ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4
Length = 1270
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L NP F + ++
Sbjct: 624 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 682
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 802
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 803 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T+A A+ + +PF NE KR A SD
Sbjct: 862 PRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-----NEGKRLGYIHRNFAG--NRFSD 914
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF PED
Sbjct: 915 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 973
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1028
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1029 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1073
Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ I++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 479 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 522
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G TYPV+ ++LED + +
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQM 581
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 244/466 (52%), Gaps = 24/466 (5%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
++ +N + LIE LL+ I + GA+LVFLPGW I + L N F + ++
Sbjct: 626 MSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF-GSHRYQ 684
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 685 ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 744
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 745 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIA 804
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP I A L+++ AL ++++T LG L L +
Sbjct: 805 LSIKLLRLG-GIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIE 863
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 864 PRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 916
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED- 891
+A+++ F+ W +A+ G+EA FC Q ++ + M + QL+ LI +GF PED
Sbjct: 917 HVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF-PEDC 975
Query: 892 ----VSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
V + + ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 976 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVN 1030
Query: 948 FKLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1031 CPFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1075
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 161/242 (66%), Gaps = 20/242 (8%)
Query: 157 SKAEIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGC 215
S +I+M +++ LT ++E+D NL+ +++ER LP+ F+ I + SN VV+I G TGC
Sbjct: 358 STEQISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGC 417
Query: 216 GKTTQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRL 273
GKTTQVPQ++L+ + C IV TQPRRISA +VAER++ ERGE G + GY +R
Sbjct: 418 GKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRF 477
Query: 274 ESKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRY 332
ES + H+SI+FCT GVLLR L + + ++H+IVDEIHERD
Sbjct: 478 ESILPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDIN 521
Query: 333 SDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
+DF+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED +
Sbjct: 522 TDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCI 581
Query: 393 SI 394
+
Sbjct: 582 QM 583
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 241/465 (51%), Gaps = 22/465 (4%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFV 594
+A +N + LIE LL I + GA+LVFLPGW I + L NP F + ++
Sbjct: 621 MAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF-GSHRYQ 679
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
I+PLHS +P +Q+KVF P G KIILSTNIAET+ITI+DVVYVIDS + K K + +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELC 714
NN++ + W SK + +QR GRAGR + G C+HL S+ R L PE+ R P+ E+
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 799
Query: 715 LQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVH 774
L +KLL I FL K ++PP + A L+++ AL ++++T LG L L +
Sbjct: 800 LSIKLLRLG-GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 858
Query: 775 PLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSD 834
P KM+ + D T++ A+ + +PF +E KR A SD
Sbjct: 859 PRFGKMMIMGCIFYVGDAICTISAATCFPEPFI-----SEGKRLGYIHRNFAG--NRFSD 911
Query: 835 QLAVIAAFECWKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDV 892
+A+++ F+ W +A+ G+EA FC ++ + M + QL+ LI +GF E +
Sbjct: 912 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECL 971
Query: 893 SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+ P ++ ++L G+YP V HK R+ + T G + +H S+N
Sbjct: 972 LTQVFTNTGPDNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNC 1026
Query: 949 KLSFKKTD-DCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
S + P V+ E R + + T+V PL LLL A++
Sbjct: 1027 PFSSQDMKYPSPFFVFGEKIRTR-AISAKGMTLVTPLQLLLFASK 1070
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 158/239 (66%), Gaps = 20/239 (8%)
Query: 160 EIAMKVES-LTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+I+M +++ L ++E+D +L+ +++ER LP+ F+ I + N VV+I G TGCGKT
Sbjct: 356 QISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKT 415
Query: 219 TQVPQFLLEHIWS--KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQVPQF+L+ + C IV TQPRRISA SVAER++ ERGE G + GY +R ES
Sbjct: 416 TQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 475
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ H+SI+FCT GVLLR L + + ++H+IVDEIHERD +DF
Sbjct: 476 LPRPHASIMFCTVGVLLRKL----------------EAGIRGISHVIVDEIHERDINTDF 519
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
+L ++RD++ +YP +R++LMSAT+D F +YF CP+I+V G T+PV+ ++LED + +
Sbjct: 520 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQM 578
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 237 bits (604), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 157/455 (34%), Positives = 238/455 (52%), Gaps = 22/455 (4%)
Query: 545 LVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPS 604
L LIE LL+ I + GA+LVFLPGW I + L NP F S + I+PLHS +P
Sbjct: 636 LELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHS-YCILPLHSQIPR 694
Query: 605 VQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 664
+Q+KVF P G K+ILSTNIAET+ITI+DVVYVIDS + K K + +NN++ + W
Sbjct: 695 DEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVW 754
Query: 665 VSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNC 724
SK + +QR GRAGR + G C+HL S+ R L PEI R P+ E+ L +KLL
Sbjct: 755 ASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLG- 813
Query: 725 NIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFA 784
I FL K ++PP + A L+++ AL ++++T LG L L + P + KM+
Sbjct: 814 GIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIG 873
Query: 785 ILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFEC 844
+ D T++ A+ + +PF +E +R A SD +A+++ F+
Sbjct: 874 CIFYVGDALCTISAATCFPEPFI-----SEGRRLGYVHRNFAG--NRFSDHVALLSVFQA 926
Query: 845 WKNAKQRGQEA--WFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVP 902
W +A+ G++A FC ++ + M + QL+ L+ GF E + + N P
Sbjct: 927 WDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNAGFPEECLMNQVFNNTGP 986
Query: 903 ----GIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTD-D 957
++ ++L G+YP V HK R+ + T G + +H S+N S +
Sbjct: 987 DNNLDVVISLLAFGVYPNVCY----HKEKRKILTTEGRNAL-IHKSSVNCPFSNQDLKYP 1041
Query: 958 CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATE 992
P V+ E R + + T+V PL LLL A++
Sbjct: 1042 SPFFVFSEKIRTR-AISAKGMTMVSPLQLLLFASK 1075
Score = 214 bits (544), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 153/224 (68%), Gaps = 19/224 (8%)
Query: 174 KDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLL-EHIWS- 231
+D N++Q++ +R LP+ F++ I V ++ VV+I G TGCGKTTQVPQ++L E+I +
Sbjct: 376 QDPNIKQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRND 435
Query: 232 KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGK-HSSIVFCTNGV 290
+ C IV TQPRRISA SVAER++ ERGE IG + GY +R ES + H+S++FCT GV
Sbjct: 436 RAAQCNIVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGV 495
Query: 291 LLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL 350
LLR L S + ++H+IVDEIHERD +DF+L ++RD++ ++P +
Sbjct: 496 LLRKLES----------------GIRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEI 539
Query: 351 RLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI 394
R+ILMSAT+D F +YF CP+I+V G T+PV+ +YLED + +
Sbjct: 540 RVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYLEDCIQM 583
>sp|P24785|MLE_DROME Dosage compensation regulator OS=Drosophila melanogaster GN=mle PE=2
SV=2
Length = 1293
Score = 233 bits (594), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 255/482 (52%), Gaps = 24/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N + + Q +A ++ + L+E LL I + GAILVFLPGW I
Sbjct: 612 NKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMK 671
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
L F DTS++ I+P HS +P +Q+KVF+ P G KIILSTNIAET+ITIDD+V+
Sbjct: 672 FLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVF 731
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VID + + K + +NN+++ + W SK + +QR GRAGR + G C+ L S+ R +L D
Sbjct: 732 VIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED 791
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
PE+ R P+ E+ L +KLL +I FL K L+PP + A ++L+++ L ++
Sbjct: 792 NLTPEMFRTPLHEMALTIKLLRLG-SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLD-PALTLACASDYRDPFTLPISPNEKKRA 818
++T LG L L + P + KM+ + C D A+ + +S + + F+L I +++ A
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIG--QRRLA 908
Query: 819 TAAKFELASLYGGQ-SDQLAVIAAFECWKNAKQRGQ--EAWFCSQYFVSSGVMNMLLGMR 875
K +L G + SD +A+I A + W+ KQRG+ EA FC + MN++ +
Sbjct: 909 NHQK----ALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 876 KQLQTELIKNGFIPEDVSSCSHNARVPG------IIHAVLMAGLYPMVARLRPPHKNGRR 929
+QL L + GF E + S + R+ G + A+L GLYP + HK R+
Sbjct: 965 QQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNIC----VHKEKRK 1020
Query: 930 FVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
+ T A + LH S+N + T P V+ E R + + ++V PL ++L
Sbjct: 1021 VLTTESKAAL-LHKTSVNCS-NLAVTFPYPFFVFGEKIRTR-AVSCKQLSMVSPLQVILF 1077
Query: 990 AT 991
+
Sbjct: 1078 GS 1079
Score = 219 bits (559), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 23/248 (9%)
Query: 160 EIAMKVE-SLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKT 218
+++M E SL R + D RQ +E R KLPI++ + I + ++ N VV+I G TGCGKT
Sbjct: 355 DLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKT 414
Query: 219 TQVPQFLLE-HIWS-KGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESK 276
TQ+ Q++L+ +I S +G I TQPRRISA SVAER++ ER E +GD +GY +R ES
Sbjct: 415 TQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESV 474
Query: 277 GGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDF 335
+ + +I+FCT GVLLR L EA + ++HIIVDEIHERD SDF
Sbjct: 475 FPRPYGAILFCTVGVLLRKL---------EAG-------LRGVSHIIVDEIHERDVNSDF 518
Query: 336 MLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSI- 394
+L I+RDM+ +YP L +ILMSAT+D +FS+YFG CPV++VPG +PV+ F+LED++ +
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Query: 395 --LKSAES 400
+ SAES
Sbjct: 579 DFVPSAES 586
>sp|O60114|YG65_SCHPO Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC15C4.05 PE=3 SV=1
Length = 1428
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 264/536 (49%), Gaps = 44/536 (8%)
Query: 442 LELVSLEGSPNVYNYQHTLTGLTPLMVLAGKG----RVGDVCMLLSLGADCQLKAKDGRT 497
L+++ + + N +Q G + L+ + GK R +L G D G+
Sbjct: 784 LKIIIMSATLNAEKFQLYFEG-SNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQD 842
Query: 498 ALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICM 557
++ + E + A I K E+A+ + ++ A N + I+ LI LL+ I
Sbjct: 843 VIEEDDYETDQQDASISNKSAEDAIVE------MNLIPAWYNEKAINYGLIVYLLKYIFT 896
Query: 558 DSE---DGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRP 614
+ + +LVFLPG +I + + + P FR+ KF I LHS + S QQ+ VF P
Sbjct: 897 EGDPKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIP 956
Query: 615 PPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRA 674
P GCRKI+LSTNIAET +TI DV VID+G +E Y+ ++S L ++VSKA+AKQR+
Sbjct: 957 PKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRS 1016
Query: 675 GRAGRCQAGICYHLYSQLRA-ASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKT 733
GRAGR Q GICYHL+S+ + +Q PEI R+ ++E+ L+VK+ +++D L K
Sbjct: 1017 GRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMG-DVQDVLGKA 1075
Query: 734 LDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPA 793
LDPP S I A+ L +GALS +EK+T+LG+ L L V + K+L C+D A
Sbjct: 1076 LDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAA 1135
Query: 794 LTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN---AKQ 850
++ PF + + + A A+ A +SD + + A+ W+ +
Sbjct: 1136 SSIVAMLTIGSPFRKSV--DNEFSANKARLSFAK-ENTRSDLVLMYYAYCAWREICLSPL 1192
Query: 851 RGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI-PEDVSSCSHNAR--------V 901
E F + +++ ++M ++ QL +EL + DV +C R +
Sbjct: 1193 GPDEDSFAKEKYLNLEALSMTESLKIQLLSELKDMKLLGASDVDTCKSLKRSICRRFAVI 1252
Query: 902 PG----------IIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
P I+ V+ A LYP + R R++ + +VR+ S+N
Sbjct: 1253 PKEHDINSGNAEILCGVIAASLYPNILRY---DYEKRQWSTLSTNKRVRILDVSVN 1305
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 168/287 (58%), Gaps = 34/287 (11%)
Query: 185 RSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPR 244
R++LP + F++ I V+++Q+++ISG+TGCGK+TQ+P FLLE+ G+ KI T+PR
Sbjct: 628 RNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENSTKNGKAVKIYVTEPR 687
Query: 245 RISATSVAERISVERGEN-----IGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
RISA S+A R+S E G N + +GY +RL+SK + + + T G LRLL
Sbjct: 688 RISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLL---- 743
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
E N ++ ++TH+I+DE+HER SD +L + +L +PHL++I+MSATL
Sbjct: 744 -----EVGN-----EIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATL 793
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTE 419
+A++F YF G +I +PG TYPV FYLED+LS + +S + ++ +D E +
Sbjct: 794 NAEKFQLYFEGSNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQ 853
Query: 420 E-----NKSTLDEAISL----AWSNDE------FDMLLELVSLEGSP 451
+ NKS D + + AW N++ LL+ + EG P
Sbjct: 854 QDASISNKSAEDAIVEMNLIPAWYNEKAINYGLIVYLLKYIFTEGDP 900
>sp|Q22307|DHX9_CAEEL Probable ATP-dependent RNA helicase A OS=Caenorhabditis elegans
GN=rha-1 PE=2 SV=3
Length = 1301
Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 257/482 (53%), Gaps = 22/482 (4%)
Query: 520 NALSDSMKQQLLDKYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRD 579
N L+D + L ++ ++ + I +IE +L I DGA+LVFLPGW +I +
Sbjct: 618 NILTDPSINESLKTAMSRISEKDIPFGVIEAILNDIASRGVDGAVLVFLPGWAEIMTLCN 677
Query: 580 RLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVY 639
RLL + F +K+ I+PLHS + S +Q+KVF P G RKII+STNIAET+ITIDDVVY
Sbjct: 678 RLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYP-GKRKIIVSTNIAETSITIDDVVY 736
Query: 640 VIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPD 699
VIDS + KE+ Y NN+ + W SK + QR GRAGR +AG +HL S++R +L D
Sbjct: 737 VIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVRAGYAFHLCSKMRFEALDD 796
Query: 700 FQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDE 759
E+ RIP+ ++ L +KLL ++ +FL K L PP + + VLQ +GAL +
Sbjct: 797 HGTAEMLRIPLHQIALTIKLLRLG-SVGEFLGKALQPPPYDMVVESEAVLQAMGALDRNL 855
Query: 760 KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRAT 819
++T LG+ L + + P+++K+L + +A A + PF P EK +
Sbjct: 856 ELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPTPFV----PREKHHSR 911
Query: 820 AAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAW---FCSQYFVSSGVMNMLLGMRK 876
+ + SD +A+++ + ++ A Q G A FC +Y +S+ V+ M G R+
Sbjct: 912 LSGTQRKFAGNKFSDHVAIVSVIQGYREAVQMGASAAEREFCERYSLSNPVLKMTDGARR 971
Query: 877 QLQTELIKNGFIPEDV-SSCSHNARVP----GIIHAVLMAGLYPMVARLRPPHKNGRRFV 931
QL L PED+ S N P ++ ++L+ LYP VA + G+R V
Sbjct: 972 QLIDVLRNQCSFPEDILFDISVNVNGPDRELNLMRSLLVMALYPNVA-----YYVGKRKV 1026
Query: 932 ETAGGAKVRLHPHSLNFKLSFKKTDD--CPLMVYDEITRGDGGMHVRNCTVVGPLPLLLL 989
T + ++ +S+ ++ ++ D PL+V+ E R + + +V+ + LL+
Sbjct: 1027 LTIEQSSALINKYSMLVPMNNRQEMDFPSPLLVFTEKVRTR-CISCKQMSVISAIQLLVF 1085
Query: 990 AT 991
+
Sbjct: 1086 GS 1087
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 159/249 (63%), Gaps = 31/249 (12%)
Query: 163 MKVESLTSRI------EKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCG 216
M +E ++ RI ++ L +I +R +LP++ +++ I TV N+V LI GETGCG
Sbjct: 350 MSMEQISQRIMEKEDFKRGEALDKITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCG 409
Query: 217 KTTQVPQFLLEHIW--SKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLE 274
K+TQV QFLLE S G + V +QPRRISA S+AER++ ERGE +G+ GY +R +
Sbjct: 410 KSTQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGEEVGETCGYNVRFD 469
Query: 275 SKGGK-HSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYS 333
S + + SI+FCT GVLLR++ ++ + ++H+I+DEIHERD +
Sbjct: 470 SATPRPYGSIMFCTVGVLLRMM----------------ENGLRGISHVIIDEIHERDVDT 513
Query: 334 DFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYF------GGCPVIQVPGFTYPVKSFY 387
DF+L ++R+M+ +Y LR++LMSAT+D D F+ +F G PVI + G T+PV+SFY
Sbjct: 514 DFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFY 573
Query: 388 LEDVLSILK 396
LED+L L+
Sbjct: 574 LEDILHNLQ 582
>sp|P0C7L7|YUM14_USTMA Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=UM04112 PE=3 SV=1
Length = 1567
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 248/471 (52%), Gaps = 47/471 (9%)
Query: 562 GAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKI 621
GAILVF PG +I + D + + R SK I+PLH+ + + +Q++VF+ G RKI
Sbjct: 1026 GAILVFCPGVGEIRQAIDAITTS--VRGQSKVEILPLHANLSADEQRRVFQPVGAGRRKI 1083
Query: 622 ILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQ 681
++STN+AET+ITI DV YV+D+GR+KE ++P + ++ L W S+A+ KQR GRAGR +
Sbjct: 1084 VVSTNVAETSITIPDVSYVVDTGRVKETRFEPESGLTRLVECWASRAACKQRRGRAGRVR 1143
Query: 682 AGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSV 740
AG C+ LYS+ + + Q PE++R+P+E L L+VK + + +++++L K LDPP
Sbjct: 1144 AGECFRLYSRYVDEKKMAAQQTPEMRRVPLESLFLEVKSMREDEDVKEYLNKALDPPSLA 1203
Query: 741 TIRNAIIVLQDIGALSLDE----KVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
++ A+ L + GAL D ++T LG+ L L + ++K+L + CL P LT+
Sbjct: 1204 SMDAALTNLIEAGALQSDRGYKSRLTSLGKHLAQLPLDLRLAKLLIMGTIFGCLGPMLTV 1263
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA----KQRG 852
A + F P E+ A F A G +SD LA AAFE W+ K G
Sbjct: 1264 ASIMSCKPLFNTPFEKREEASKARASFAAA---GCRSDLLADAAAFEEWQTMRAQRKTNG 1320
Query: 853 QEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCS--------HNARVPGI 904
+ +C +F+S + + R L + L + GF+ D S+ NA+ G+
Sbjct: 1321 EIREWCESHFISQSSLRDIQTNRLDLLSHLQEMGFVAPDYSAFGVYDDERYDMNAQHAGV 1380
Query: 905 IHAVLMAGLYPMVARLRPPHKNGRRFVETAGG-----------------AKVRLHPHSLN 947
+ +V++AGL+P V R+ P +F +++ G +V LHP S
Sbjct: 1381 LRSVILAGLWPAVVRIDVPSA---KFDQSSSGTVQREAEARQVKYFDRNGRVFLHPSSTL 1437
Query: 948 FKLSFKKTDDCPLMVYDEITRGDGG---MHVRNCTVVGPLPLLLLATEIAV 995
F S K + L + + + G G +++R+ T V LLL ++ +
Sbjct: 1438 F--SCKGFESSYLTTFAKSSTGAGADSKVYLRDATEVPLFALLLFGGKLKI 1486
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 136/221 (61%), Gaps = 23/221 (10%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHI--WSKGETCKIVC 240
E R LP +S I + SN+VV+I+GETGCGKTTQVPQF+L+ +G C IV
Sbjct: 731 ETRRSLPAASAAREILGLIRSNRVVIIAGETGCGKTTQVPQFILDEAIEAGRGSECNIVV 790
Query: 241 TQPRRISATSVAERISVERGENI---------GDNIGYKIRLESKGGKHSSIVFCTNGVL 291
TQPRR+SA VA R++VERGE + G +GY IR E + + ++F T GVL
Sbjct: 791 TQPRRVSAIGVASRVAVERGEKLDGKKKAVAPGSLVGYAIRGERRASRECRLLFTTTGVL 850
Query: 292 LRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLR 351
LR L + G + LK ++H++VDE+HER+ SDF+L +R++L ++
Sbjct: 851 LRRLGAGGDTDLK------------GISHVVVDEVHERNVDSDFLLLELRELLRRNSRIK 898
Query: 352 LILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVL 392
++LMSAT++ + F+ YFG P I +PG T+ V+ YLED++
Sbjct: 899 VVLMSATINQETFASYFGKAPCISIPGRTFAVEDHYLEDIV 939
>sp|Q5R746|YTDC2_PONAB YTH domain-containing protein 2 OS=Pongo abelii GN=YTHDC2 PE=2 SV=1
Length = 671
Score = 214 bits (544), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 218/431 (50%), Gaps = 51/431 (11%)
Query: 699 DFQVPEIKRIPIEELCLQVKLLDP-NCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSL 757
+FQ PE+ R+P++ELCL KLL P NC + DFL K +PP ++ +RNA+ +L+ I A+
Sbjct: 3 EFQTPELLRMPLQELCLHTKLLAPVNCPVADFLMKAPEPPPALIVRNAVQMLKTIDAMDT 62
Query: 758 DEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKR 817
E +TELG L L V P + KM+ A+++ CLDP LT+AC YRDPF LP ++K+
Sbjct: 63 WEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRA 122
Query: 818 ATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQ 877
A + + G SD +A++ AF+ W+ A+ G E FC + F+S M +++GMR Q
Sbjct: 123 AMLCRKRFTA--GAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQ 180
Query: 878 LQTELIKNGFIPE----DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVET 933
L +L +GF+ D+ + N+ ++ A L+AG+YP + H + V T
Sbjct: 181 LLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLV-----HVDRENLVLT 235
Query: 934 A-GGAKVRLHPHSLNFKLSFKK---------------TDDCPLMVYDEITRGDGGMHVRN 977
KVR HP S+ + +KK TD ++YDE+TR ++R
Sbjct: 236 GPKEKKVRFHPASVLSQPQYKKIPPANGQAAAIKALPTD---WLIYDEMTRAHRIANIRC 292
Query: 978 CTVVGPLPLLLLATEIAVAPAPDNEDDD-EDDDMSDDDADENESDEDCMEIDDKTSGQHG 1036
C+ V P+ +L+ +A E D + +D +D E++DKT+
Sbjct: 293 CSAVTPVTILVFCGPARLASNALQEPSSFRVDGIPNDSSDS--------EMEDKTTANLA 344
Query: 1037 ENVMSSPDKSVTVVVDRWLYFGSTALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEAS 1096
+ +D WL+F + + LR++ L ++ P K V EA+
Sbjct: 345 -----------ALKLDEWLHFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEAT 393
Query: 1097 MYAMASILSYD 1107
+ A+ ++LS +
Sbjct: 394 IRAIIAVLSTE 404
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 179/335 (53%), Gaps = 20/335 (5%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G +LVFL G +I+ + A + T ++V++PLHS + Q KVF PPG R
Sbjct: 377 ERGDLLVFLSGMAEISAVLE--AAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVR 434
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K ILSTNIAET++TID + +V+DSG++KE SYDP + LQ W+S+ASA+QR GRAGR
Sbjct: 435 KCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGR 494
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL---DPNCNIEDFLQKTLDP 736
G+C+ LY++ + + VPEI+R+ ++ L LQ+K + DP ++P
Sbjct: 495 TGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF------PFIEP 548
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P ++ AI+ L+D GAL E +T +G L L V ++ KML + ++P LT+
Sbjct: 549 PPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTI 608
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECW---KNAKQRGQ 853
A A + PFT S AA+ L S Q D + F W K+ + R
Sbjct: 609 AAALSVQSPFTR--SAQSSPECAAARRPLES---DQGDPFTLFNVFNAWVQVKSERSRNS 663
Query: 854 EAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
W C + + + + +R+Q + L +G +
Sbjct: 664 RKW-CRRRGIEEHRLYEMANLRRQFKELLEDHGLL 697
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 128/212 (60%), Gaps = 19/212 (8%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
L ++ ER+ LPI+ + + I T+ +QVV+++G+TGCGK+TQVPQ+LL +S
Sbjct: 150 GRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH--- 206
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
+ CTQPRRI+ S+A+R+ E G +GY+IR ES + IVF T G+LLR
Sbjct: 207 --VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR-- 262
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+ +P+ L IVDE+HER ++DF+L +++ +LP+ P L++ILM
Sbjct: 263 ---------QIQREPSLPQYEVL---IVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILM 310
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
SAT++ FS YF PV+QVPG +P+ Y
Sbjct: 311 SATINISLFSSYFSNAPVVQVPGRLFPITVVY 342
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 175/334 (52%), Gaps = 18/334 (5%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G +LVFL G +I D A + T ++V++PLHS + Q KVF P G R
Sbjct: 379 ERGDLLVFLSGMAEITTVLD--AAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVR 436
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K ILSTNIAET++TID + +V+DSG++KE SYDP + LQ W+S+ASA+QR GRAGR
Sbjct: 437 KCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGR 496
Query: 680 CQAGICYHLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL---DPNCNIEDFLQKTLDP 736
G+CY LY++ + + VPEI+R+ ++ L LQ+K + DP ++P
Sbjct: 497 TGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF------PFIEP 550
Query: 737 PVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL 796
P ++ AI+ LQ+ GAL E +T +G L L V ++ KML + +P LT+
Sbjct: 551 PPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTI 610
Query: 797 ACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAK--QRGQE 854
A A + PFT N ATA + L Q D + F W K + G
Sbjct: 611 AAALSVQSPFTRSAQSNLDC-ATARR----PLESDQGDPFTLFNVFNAWVQVKSERSGNS 665
Query: 855 AWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
+C + V + + +R+Q + L +G +
Sbjct: 666 RKWCRRRGVEEHRLYEMANLRRQFKELLEDHGLL 699
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 127/212 (59%), Gaps = 19/212 (8%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
L ++ ER+ LPI+ + + I T+ +QVV+++G+TGCGK+TQVPQ+LL +S
Sbjct: 152 GRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH--- 208
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
+ CTQPRRI+ S+A+R+ E G +GY+IR ES + IVF T G+LLR
Sbjct: 209 --VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR-- 264
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
+ +P+ L IVDE+HER ++DF+L +++ +LP P L++ILM
Sbjct: 265 ---------QIQREPSLPQYQVL---IVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILM 312
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
SAT++ FS YF PV+QVPG +P+ Y
Sbjct: 313 SATINISLFSSYFSHAPVVQVPGRLFPITVVY 344
>sp|Q06698|YL419_YEAST Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YLR419W PE=1
SV=1
Length = 1435
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 214/403 (53%), Gaps = 29/403 (7%)
Query: 547 LIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQ 606
++E + +++ +++G+I+VFLPG +INK + LLAN + + F+++PLHS +
Sbjct: 849 VVEYVHKRLKAANDNGSIIVFLPGVGEINKCCN-LLANK--SNEADFMVLPLHSALTPED 905
Query: 607 QKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 666
QK+VFK+ G RK+++STNIAET+ITIDD V ID+GR K Y+P +N + L S++S
Sbjct: 906 QKRVFKKYH-GKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFIS 964
Query: 667 KASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
KA KQR GRAGR + G+ Y L+S+ L + +PEIKRIP+E L L VK + +
Sbjct: 965 KAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIK-D 1023
Query: 726 IEDFLQKTLDPPVSVTIRNAIIVLQDIGAL-SLDEKVTELGEKLGCLSVHPLM----SKM 780
++ FL LD P ++ A +L IG + D+ +T+LG+ +S+ P+M K+
Sbjct: 1024 VKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQ---FISLMPVMDSKHGKL 1080
Query: 781 LFFAILMDCLDPALTLACASDYRD-PFTLPISPNEKKRATAAKFELASLYGGQSDQLAVI 839
L + IL C D ++ L PF EK + K+E + D AV+
Sbjct: 1081 LIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKIKKLLCKYE------SRGDLFAVL 1134
Query: 840 AAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPED-----VSS 894
+ K + + +S +N + Q + L GF+P D +S
Sbjct: 1135 EIVRDYFKIKDSSIKRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISD 1194
Query: 895 CSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA 937
+ N R I+ A+L YP +AR++ P +++ T+ GA
Sbjct: 1195 LNRNERNFDILRAILTGAFYPHIARVQLP---DVKYLSTSSGA 1234
Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 146/248 (58%), Gaps = 18/248 (7%)
Query: 151 FCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS 210
F K +S+ +++ E T RI K + + + R +LP + VI ++ N+VVLI+
Sbjct: 568 FTKTTISEDTLSVLREEYTKRI-KSSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLIT 626
Query: 211 GETGCGKTTQVPQFLLEHIW-SKGE--TCKIVCTQPRRISATSVAERISVERGENIGDNI 267
GETG GK+TQV QF+L+ + KG+ KIVCTQPRRISA +AER+S ER G+ +
Sbjct: 627 GETGSGKSTQVVQFILDFLQKEKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEV 686
Query: 268 GYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIH 327
GY IR +K + I F T GVL+RLL Q + E T +++DE+H
Sbjct: 687 GYVIRGVNKTKASTRIKFMTTGVLVRLL--QNARTMLEN------------TIVVIDEVH 732
Query: 328 ERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFY 387
ER +D ++ +++++L ++++LMSAT++ D F ++F G + G T+P+ ++
Sbjct: 733 ERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATCHIEGRTFPITDYF 792
Query: 388 LEDVLSIL 395
LED+LS L
Sbjct: 793 LEDILSDL 800
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 144/462 (31%), Positives = 231/462 (50%), Gaps = 37/462 (8%)
Query: 535 LATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLA--NPFFRDT 590
L T PE +D LI L +I + +G ILVFL G E+I+ L ++
Sbjct: 697 LYTKQPETDYLDAALITVL--QIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNV 754
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPPG RK++++TNIAE ++TID + YV+D G K+
Sbjct: 755 PELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNV 814
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIP 709
Y+P + +L + +S+ASAKQRAGRAGR G CY LY++ +P +PEI+RI
Sbjct: 815 YNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRIN 874
Query: 710 IEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKL 768
+ L +K + I D L +DPP + +A+ L +GAL + +T+LG K+
Sbjct: 875 LGMTTLTMKAM----GINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKM 930
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
+ P +SKML ++ + C D LT+ + F P +++ A + A
Sbjct: 931 AEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRP-----REKQAQADQKRAKF 985
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
+ + D L ++A +E WK G W C + F+ S + +RKQL + + K
Sbjct: 986 FQPEGDHLTLLAVYEAWKAKNFSG--PW-CFENFIQSRSLRRAQDVRKQLLSIMDKYKL- 1041
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
DV + N I + AG + AR + P + R VE V +HP S F
Sbjct: 1042 --DVVTAGKNFTK---IRKAITAGFFFHGAR-KDPQEGYRTLVEN---QPVYIHPSSALF 1092
Query: 949 KLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+ ++ D ++Y ++ ++R TV+ P L+ LA
Sbjct: 1093 Q---RQPD---WVIYHDLVMTTKE-YMREVTVIDPKWLVELA 1127
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 137/231 (59%), Gaps = 25/231 (10%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIV 239
I E+R LPI K + V NQV+++ GETG GKTTQV Q+L E ++ KG KI
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKG---KIG 564
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E G +G+ +GY IR E G + I + T+G+LLR ++
Sbjct: 565 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL--- 621
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+++S + I++DE HER ++D + +++ ++ LRLI+ SATL
Sbjct: 622 -----------IDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATL 670
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
DA++FS YF C + +PG T+PV+ Y K E+++LD+A + V
Sbjct: 671 DAEKFSGYFFNCNIFTIPGRTFPVEILY-------TKQPETDYLDAALITV 714
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 215/425 (50%), Gaps = 38/425 (8%)
Query: 533 KYLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLA--NPFFRDT 590
+Y + +D LI + +I + G IL+FL G E+I+ L +
Sbjct: 690 RYTKDPEADYLDASLI--TVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNV 747
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+I+P++S +PS Q K+F+ PPG RK++++TNIAET++TID + YVID G K+K
Sbjct: 748 PDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKC 807
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYS------QLRAASLPDFQVPE 704
++P N + +L + +S+A+A+QR+GRAGR G CY LY+ ++ A+S +PE
Sbjct: 808 FNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASS-----IPE 862
Query: 705 IKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE 763
I+R + L +K + I D L +DPP T+ +A+ L +GAL + +T
Sbjct: 863 IQRTNLGNTVLTMKAM----GINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTR 918
Query: 764 LGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKF 823
LG K+ + P +SKML ++ + C D LT+ ++ F P K++ A
Sbjct: 919 LGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRP-----KEKQALADQ 973
Query: 824 ELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELI 883
+ A + + D L ++ +E WKN+K W C + FV + + +RKQL T +
Sbjct: 974 KKAKFFQPEGDHLTLLNVYESWKNSK--FSNPW-CFENFVQARSLRRAQDVRKQLITIMD 1030
Query: 884 KNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHP 943
+ D+ S N I + +G + ++ + P++ + VE G V +HP
Sbjct: 1031 RYKL---DIISAGRNYTK---IQKAICSGFFANASK-KDPNEGYKTLVE---GQPVYIHP 1080
Query: 944 HSLNF 948
S F
Sbjct: 1081 SSTLF 1085
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 134/235 (57%), Gaps = 24/235 (10%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A R I E+R LPI ++ V +Q++++ GETG GKTTQ+ Q+L E + G
Sbjct: 496 ATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGY--GTR 553
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
KI CTQPRR++A SV++R++ E G +G +GY IR E + I F T+G+LLR
Sbjct: 554 GKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLR-- 611
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
E P ++SA + II+DE HER +D + +++ L P L++++
Sbjct: 612 ---------ECLLDP---NLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLIT 659
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
SATL+A++FS+YF + +PG T+PV Y +D E+++LD ASLI
Sbjct: 660 SATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKD-------PEADYLD-ASLIT 706
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 177 bits (450), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 211/419 (50%), Gaps = 26/419 (6%)
Query: 535 LATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLA--NPFFRDTSK 592
L T PE L + +I + G +LVFL G E+I+ + + L D +
Sbjct: 722 LYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPE 781
Query: 593 FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYD 652
+I+P++ +PS Q ++F P G RK++++TNIAET++TID + YV+D G +K+K Y+
Sbjct: 782 LIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYN 841
Query: 653 PYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ--LRAASLPDFQVPEIKRIPI 710
P + + +L + +S+A+AKQR+GRAGR G CY LY++ R LP VPEI+R +
Sbjct: 842 PKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPT-PVPEIQRTNL 900
Query: 711 EELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGC 770
LQ+K + N N+ DF +D P ++ A+ L + AL D +T+LG ++
Sbjct: 901 ASTLLQLKAMGIN-NLIDF--DFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAE 957
Query: 771 LSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYG 830
+ P +SK+L ++ + C + LT+ + ++ F P + AKF +
Sbjct: 958 FPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKF-----HQ 1012
Query: 831 GQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPE 890
+ D L ++A + WKN + W C + F+ M +RKQL + ++ +
Sbjct: 1013 PEGDHLTLLAVYNSWKN--HHFSQPW-CFENFIQVRSMKRAQDIRKQLLGIMDRHKLL-- 1067
Query: 891 DVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFK 949
+ SC + + + +G + A+ R P + R + G V +HP S F+
Sbjct: 1068 -MVSCGRDV---SRVQKAICSGFFRNAAK-RDPQEGYRTLTD---GQNVYIHPSSACFQ 1118
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 23/230 (10%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
+VE+R LPI + K + + NQ++++ GETG GKTTQ+ Q+ +E G KI C
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEA--GLGRRGKIGC 590
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300
TQPRR++A SVA+R++ E G +G ++GY IR E + + I + T+G+LLR
Sbjct: 591 TQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLR------- 643
Query: 301 SRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLD 360
E P D+S + I++DE HER ++D + +++ P L+LI+ SATLD
Sbjct: 644 ----ECLIDP---DLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLD 696
Query: 361 ADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
+ +FS+YF P+ +PG T+PV+ Y + ES++L++A + V
Sbjct: 697 SVKFSEYFLEAPIFTIPGRTFPVEILY-------TREPESDYLEAAHITV 739
>sp|O94536|UCP12_SCHPO Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ucp12 PE=3 SV=1
Length = 1327
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 234/495 (47%), Gaps = 63/495 (12%)
Query: 543 IDLVLIEQLLRKIC--MDSEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHS 600
ID LI +L+ I + S G+ILVFLPG +I + + + +D SKF ++PLH+
Sbjct: 793 IDYHLISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKS----KDGSKFEVLPLHA 848
Query: 601 MVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTL 660
+ + +Q++ FK RKII +TNIAET+ITIDDVV VIDSGR+K+ YD ++ T
Sbjct: 849 SLNTSEQRRCFKTYTK--RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTF 906
Query: 661 QSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQ--- 716
+ +W S+A+ +QR GRAGR + GICY LY++ + PE+ R + ++CL
Sbjct: 907 KETWASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVP 966
Query: 717 -VKLLDPNCN------IEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLG 769
VK N I+ F+ +DPP T+ A+ L +GAL++ E +T LGE L
Sbjct: 967 LVKRFSSAGNSVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLV 1026
Query: 770 CLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLY 829
L + + K+L F + L+PALT+ + PF + +E + + + +
Sbjct: 1027 SLPIDLKLGKLLVFGSIFGYLEPALTITAILSTKSPF---LGDDEAREIRSKQSQ----- 1078
Query: 830 GGQSDQLAVIAAFECW-KNAKQRG--QEAWFCSQYFVSSGVMNMLLGMRKQLQT-----E 881
G D LA + W + + RG + +C + + + + R +L E
Sbjct: 1079 -GWGDVLADARVYHNWLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQLLE 1137
Query: 882 LIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGA---- 937
L + N V + ++ A L P V + P K +FV + G+
Sbjct: 1138 LTTKKLTGNFDWYSTENLTV---LSTLIAAALSPNVVKCVYPDK---KFVASFSGSLEME 1191
Query: 938 --------------KVRLHPHSLNFKLSFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGP 983
++ +HP S F ++ C + Y++ +RNCT +
Sbjct: 1192 QEARLTKFYDQNNQRLFIHPSSTMF-VNSPNASRCTFVAYEQKVETTKPF-LRNCTPINT 1249
Query: 984 LPLLLL-ATEIAVAP 997
++LL A +I + P
Sbjct: 1250 YGMILLGANDILIDP 1264
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 145/242 (59%), Gaps = 16/242 (6%)
Query: 153 KPKMSKA--EIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDSNQVVLIS 210
KPK+ + E++ K+ + S K + + V ER KLP + I + +QVV+IS
Sbjct: 540 KPKLFRRSRELSEKLCNNWSERVKSPSYQLKVREREKLPAWESRRKIMDAIQHSQVVVIS 599
Query: 211 GETGCGKTTQVPQFLLEHIWSKGET--CKIVCTQPRRISATSVAERISVERGENIGDNIG 268
GETG GK+TQV QF+L+H S GE +VCTQPRRISA S+AER++ ER +G +G
Sbjct: 600 GETGSGKSTQVVQFILDHYLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVGKEVG 659
Query: 269 YKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHE 328
Y + E K + + FCT G+LLR + G+ L S L+ ++VDE+HE
Sbjct: 660 YSVHGEKSISKETLLEFCTTGLLLRRIQQHGLGFL------------STLSCVVVDEVHE 707
Query: 329 RDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPVKSFYL 388
R +D +L +++ ++ P+L++ILMSAT+++D F YFG + + G T+P+K +Y+
Sbjct: 708 RSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGNAGHLHIHGRTFPIKDYYI 767
Query: 389 ED 390
ED
Sbjct: 768 ED 769
>sp|Q3MHU3|TDRD9_RAT Putative ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus
GN=Tdrd9 PE=2 SV=3
Length = 1384
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 160/306 (52%), Gaps = 20/306 (6%)
Query: 559 SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
SE ++LVFLPG +IN + LL N + + + PLHS V +Q VF P PG
Sbjct: 385 SERSSVLVFLPGLGEINYMHE-LLTNMIHK---RLQVYPLHSSVTLEEQNNVFLSPVPGY 440
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKIILSTNIAE+++T+ DV YVID + D N +L+ SW SK S QR GRAG
Sbjct: 441 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAG 500
Query: 679 RCQAGICYHL-YSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
R G CY L + +++PD VPE+ R P+ L+VKLLD L L PP
Sbjct: 501 RVSKGYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMG-EPRALLATALSPP 559
Query: 738 VSVTIRNAIIVLQDIGALSL----------DEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
I I++L+++GAL++ D ++T LG L L V + K++ +
Sbjct: 560 SLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVF 619
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
CLD L +A A ++ FT+P + F +S +SD LA++ AF W+
Sbjct: 620 GCLDECLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSS----RSDCLALVEAFRAWQA 675
Query: 848 AKQRGQ 853
+QRG+
Sbjct: 676 CRQRGE 681
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 175/351 (49%), Gaps = 42/351 (11%)
Query: 168 LTSRIEKDANLRQIVEERSK---LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
L S + K +N+ I E K LPI+ K+ + S ++SN VV+I G TG GK+TQ+PQ+
Sbjct: 111 LRSPLAKISNVACIPETTYKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQY 170
Query: 225 LLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
+L+H + C IV TQPR+I A+S+A IS ER +G +GY++ LE + + ++
Sbjct: 171 VLDHYTQRSAFCNIVVTQPRKIGASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLI 230
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
+ T GVLL+ +VS + TH+ +DE+HER DF+L ++R +L
Sbjct: 231 YMTTGVLLQKIVS--------------AKSLMEFTHVFIDEVHERTEEMDFLLLVVRKLL 276
Query: 345 PSYPHL-RLILMSATLDADRFSQYFG--------GCPVIQVPGFTYPVKSFYLEDVLSIL 395
+ ++ILMSAT++ +F+ YF V +V G + ++ +YL D+ I
Sbjct: 277 RTNSRFVKVILMSATINCKQFADYFAVPVQNKMNPAYVFEVEGKPHTIEQYYLNDLGHIY 336
Query: 396 KSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYN 455
S L L E+P +T K + A+SL D+ DM G+
Sbjct: 337 HSG----LPPYRL----EEPVIT---KDVYEVAVSLIQMFDDLDM-----KESGNKTWSG 380
Query: 456 YQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQEN 506
Q + L+ L G G + + LL+ +L+ +++ L EQ N
Sbjct: 381 AQFVSERSSVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNN 431
>sp|Q14BI7|TDRD9_MOUSE Putative ATP-dependent RNA helicase TDRD9 OS=Mus musculus GN=Tdrd9
PE=1 SV=3
Length = 1383
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 160/306 (52%), Gaps = 20/306 (6%)
Query: 559 SEDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGC 618
SE ++LVFLPG +IN + LL N + + + PLHS V +Q VF P PG
Sbjct: 384 SERSSVLVFLPGLGEINYMHE-LLTNMIHK---RLQVYPLHSSVTLEEQNNVFLSPVPGY 439
Query: 619 RKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAG 678
RKIILSTNIAE+++T+ DV YVID + D N +L+ SW SK S QR GRAG
Sbjct: 440 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAG 499
Query: 679 RCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPP 737
R G CY L + +++PD VPE+ R P+ L+VKLLD L L PP
Sbjct: 500 RVSKGYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLDMG-EPRALLATALSPP 558
Query: 738 VSVTIRNAIIVLQDIGALSL----------DEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
I I++L+++GAL++ D ++T LG L L V + K++ +
Sbjct: 559 SLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVF 618
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
CLD L +A A ++ FT+P + F +S +SD LA++ AF W+
Sbjct: 619 GCLDECLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSS----RSDCLALVEAFRAWQA 674
Query: 848 AKQRGQ 853
+QRG+
Sbjct: 675 CRQRGE 680
Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 175/351 (49%), Gaps = 43/351 (12%)
Query: 168 LTSRIEKDANLRQIVEERSK---LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQF 224
L S + K +N+ I E K LPI+ K+ + S ++SN VV+I G TG GK+TQ+PQ+
Sbjct: 111 LRSPLAKLSNVACIPETTYKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQY 170
Query: 225 LLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIV 284
+L+H + C IV TQPR+I A+S+A IS ER +G +GY++ LE + + ++
Sbjct: 171 VLDHYTQRSAFCNIVVTQPRKIGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRLI 230
Query: 285 FCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDML 344
+ T GVLL+ +VS + THI +DE+HER DF+L ++R +L
Sbjct: 231 YMTTGVLLQKIVS--------------AKSLMEFTHIFIDEVHERTEEMDFLLLVVRKLL 276
Query: 345 PSYPHL-RLILMSATLDADRFSQYFG--------GCPVIQVPGFTYPVKSFYLEDVLSIL 395
+ +++LMSAT++ +F+ YF V +V G + ++ +YL D+
Sbjct: 277 RTNSRFVKVVLMSATINCKQFADYFAVPVQNKMNPAYVFEVEGKPHAIEEYYLNDL---- 332
Query: 396 KSAESNHLDSASLIVPNEDPELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYN 455
H+ + L E+P +T K + A+SL D+ DM G+
Sbjct: 333 -----GHIYHSGLPYRLEEPVIT---KDVYEVAVSLIQMFDDLDM-----KESGNKTWSG 379
Query: 456 YQHTLTGLTPLMVLAGKGRVGDVCMLLSLGADCQLKAKDGRTALQLGEQEN 506
Q + L+ L G G + + LL+ +L+ +++ L EQ N
Sbjct: 380 AQFVSERSSVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNN 430
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 208/421 (49%), Gaps = 32/421 (7%)
Query: 535 LATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLA--NPFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 747 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 804
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 805 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 864
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 865 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 923
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 924 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 979
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P K + A + A
Sbjct: 980 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP-----KDKQALADQKKAK 1034
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1035 FHQTEGDHLTLLAVYNSWKNNK--FSNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1091
Query: 888 IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
DV SC + + + +G + A+ + P + R ++ V +HP S
Sbjct: 1092 ---DVVSCGKSTVR---VQKAICSGFFRNAAK-KDPQEGYRTLIDQ---QVVYIHPSSAL 1141
Query: 948 F 948
F
Sbjct: 1142 F 1142
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 134/231 (58%), Gaps = 26/231 (11%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW-SKGETCKIV 239
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E + S+G KI
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG---KIG 614
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 615 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------ 668
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
E P D++ I++DE HER ++D + +++ + ++LI+ SATL
Sbjct: 669 -----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 720
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
DA +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 721 DAVKFSQYFYEAPIFTIPGRTYPVEILY-------TKEPETDYLD-ASLIT 763
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 208/421 (49%), Gaps = 32/421 (7%)
Query: 535 LATVNPE--LIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLLA--NPFFRDT 590
L T PE +D LI + +I + G ILVFL G E+I+ + L D
Sbjct: 771 LYTKEPETDYLDASLITVM--QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV 828
Query: 591 SKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKS 650
+ +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K
Sbjct: 829 PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 888
Query: 651 YDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAA--SLPDFQVPEIKRI 708
Y+ + L + +S+A AKQRAGRAGR G CY LY++ RA + VPEI+R
Sbjct: 889 YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE-RAYRDEMLTTNVPEIQRT 947
Query: 709 PIEELCLQVKLLDPNCNIEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ L +K + I D L +D P T+ A+ L +GAL + +T LG +
Sbjct: 948 NLASTVLSLKAM----GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 1003
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELAS 827
+ + P++ KML ++ + C + LT+ ++ F P K + A + A
Sbjct: 1004 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP-----KDKQALADQKKAK 1058
Query: 828 LYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGF 887
+ + D L ++A + WKN K W C + F+ + + +RKQ+ + ++
Sbjct: 1059 FHQTEGDHLTLLAVYNSWKNNK--FSNPW-CYENFIQARSLRRAQDIRKQMLGIMDRHKL 1115
Query: 888 IPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLN 947
DV SC + + + +G + A+ + P + R ++ V +HP S
Sbjct: 1116 ---DVVSCGKSTVR---VQKAICSGFFRNAAK-KDPQEGYRTLIDQ---QVVYIHPSSAL 1165
Query: 948 F 948
F
Sbjct: 1166 F 1166
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 134/231 (58%), Gaps = 26/231 (11%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIW-SKGETCKIV 239
I+E+R LPI K+ + V NQ++++ GETG GKTTQ+ Q+L E + S+G KI
Sbjct: 582 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG---KIG 638
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R+S E G +G +GY IR E + I + T+G+LLR
Sbjct: 639 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR------ 692
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
E P D++ I++DE HER ++D + +++ + ++LI+ SATL
Sbjct: 693 -----ECLIDP---DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL 744
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
DA +FSQYF P+ +PG TYPV+ Y K E+++LD ASLI
Sbjct: 745 DAVKFSQYFYEAPIFTIPGRTYPVEILY-------TKEPETDYLD-ASLIT 787
>sp|Q8NDG6|TDRD9_HUMAN Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9
PE=2 SV=3
Length = 1382
Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 158/305 (51%), Gaps = 20/305 (6%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E ++LVFLPG +IN + LL + + + + PLHS V +Q VF P PG R
Sbjct: 384 ERSSVLVFLPGLGEINYMHE-LLTSLVHK---RLQVYPLHSSVALEEQNNVFLSPVPGYR 439
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
KIILSTNIAE+++T+ DV YVID + D N +L+ SW SK S QR GRAGR
Sbjct: 440 KIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGR 499
Query: 680 CQAGICYHL-YSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
G CY L + S+PD VPE+ R P+ L+VKLLD L L PP
Sbjct: 500 VSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMG-EPRALLATALSPPG 558
Query: 739 SVTIRNAIIVLQDIGALSL----------DEKVTELGEKLGCLSVHPLMSKMLFFAILMD 788
I I++L+++GAL++ D ++T LG L L V+ + K++ +
Sbjct: 559 LSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFG 618
Query: 789 CLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNA 848
CLD L +A A ++ F +P + F +S +SD +A++ AF+ WK
Sbjct: 619 CLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSS----KSDCIALVEAFKTWKAC 674
Query: 849 KQRGQ 853
+Q G+
Sbjct: 675 RQTGE 679
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 168/329 (51%), Gaps = 41/329 (12%)
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPIS +K+ + S ++SN VV+I G TG GK+TQ+PQ++L+H + C IV TQPR+I
Sbjct: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYCSIVVTQPRKIG 191
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
A+S+A IS ER +G +GY++ LE + + +++ T GVLL+ +VS
Sbjct: 192 ASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVS---------- 241
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHL-RLILMSATLDADRFSQ 366
+ THII+DE+HER DF+L ++R +L + +++LMSAT+ F+
Sbjct: 242 ----AKSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFAD 297
Query: 367 YFGGCPV---------IQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPEL 417
YF PV +V G + V+ +YL D+ I S S HL E+P +
Sbjct: 298 YF-AVPVQNKMNPAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHL--------LEEPVI 348
Query: 418 TEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRVGD 477
T K + A+SL D+ DM G+ Q L + L+ L G G +
Sbjct: 349 T---KDIYEVAVSLIQMFDDLDM-----KESGNKAWSGAQFVLERSSVLVFLPGLGEINY 400
Query: 478 VCMLLSLGADCQLKAKDGRTALQLGEQEN 506
+ LL+ +L+ +++ L EQ N
Sbjct: 401 MHELLTSLVHKRLQVYPLHSSVALEEQNN 429
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 200/408 (49%), Gaps = 29/408 (7%)
Query: 562 GAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
G IL+F+PG EDI T D+++ + + ++P++S +PS Q K+F++ P G RK
Sbjct: 741 GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 800
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
I++TNIAET++T+D +++VIDSG K K ++P + LQ +S+A+A QR+GRAGR
Sbjct: 801 CIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRT 860
Query: 681 QAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPV 738
G C+ LY+Q L VPEI+R + + L +K L ++D LQ +DPP
Sbjct: 861 GPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL----GVQDLLQFHFMDPPP 916
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
+ N++ L +GAL +T G + + P +SKML + M C L +
Sbjct: 917 EDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVS 976
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFC 858
F P E+ KF + +SD L+ + + WKN +C
Sbjct: 977 MLSVPAIFYRPKGREEESDQIREKFAVP-----ESDHLSYLNVYLQWKN---NNYSTIWC 1028
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVA 918
+ +F+ + M + +R QL+ +++ ++SC + I+ + A + A
Sbjct: 1029 NDHFIHAKAMRKVREVRAQLKDIMVQQRM---SLASCGTDW---DIVRKCICAAYFHQAA 1082
Query: 919 RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEI 966
+L K +V G LHP S F + + T D +VY E+
Sbjct: 1083 KL----KGIGEYVNIRTGMPCHLHPTSSLFGMGY--TPD--YIVYHEL 1122
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 155/271 (57%), Gaps = 30/271 (11%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + I+E+R LPI + + + + + N +V++ GETG GKTTQ+ Q+L E ++ +
Sbjct: 520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT--DY 577
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I CTQPRR++A SVA+R+S E G N+G+ +GY IR E + + I + T+G+LLR
Sbjct: 578 GMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLR-- 635
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+EA D+ + II+DE HER +D + ++R+++ L+LI+
Sbjct: 636 -----ESLREA-------DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 683
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFY----LED-VLSILKSAESNHLDSAS--- 407
SAT+DA++F+ +FG P+ +PG T+PV + ED V + +K + HL A
Sbjct: 684 SATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDI 743
Query: 408 -LIVP-NEDPELTE----ENKSTLDEAISLA 432
+ +P ED E+T E+ L+ A +LA
Sbjct: 744 LIFMPGQEDIEVTSDQIVEHLEELENAPALA 774
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 199/408 (48%), Gaps = 29/408 (7%)
Query: 562 GAILVFLPGWEDINKTRDRLLAN-PFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRK 620
G IL+F+PG EDI T D+++ + + ++P++S +PS Q K+F++ P G RK
Sbjct: 741 GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 800
Query: 621 IILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRC 680
I++TNIAET++T+D +++VIDSG K K ++P + LQ +S+A+A QR+GRAGR
Sbjct: 801 CIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRT 860
Query: 681 QAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPPV 738
G C+ LY+Q L VPEI+R + + L +K L ++D LQ +DPP
Sbjct: 861 GPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL----GVQDLLQFHFMDPPP 916
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLAC 798
+ N++ L +GAL +T G + + P +SKML + M C L +
Sbjct: 917 EDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVS 976
Query: 799 ASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWFC 858
F P E+ KF + +SD L + + WKN +C
Sbjct: 977 MLSVPAIFYRPKGREEESDQIREKFAVP-----ESDHLTYLNVYLQWKN---NNYSTIWC 1028
Query: 859 SQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMVA 918
+ +F+ + M + +R QL+ +++ ++SC + I+ + A + A
Sbjct: 1029 NDHFIHAKAMRKVREVRAQLKDIMVQQRM---SLASCGTDW---DIVRKCICAAYFHQAA 1082
Query: 919 RLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCPLMVYDEI 966
+L K +V G LHP S F + + T D +VY E+
Sbjct: 1083 KL----KGIGEYVNIRTGMPCHLHPTSSLFGMGY--TPD--YIVYHEL 1122
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 156/271 (57%), Gaps = 30/271 (11%)
Query: 176 ANLRQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET 235
A + I+E+R LPI + + + + + N +V++ GETG GKTTQ+ Q+L E ++ +
Sbjct: 520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT--DY 577
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
I CTQPRR++A SVA+R+S E G N+G+ +GY IR E +++ I + T+G+LLR
Sbjct: 578 GMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLR-- 635
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355
L+EA D+ + II+DE HER +D + ++R+++ L+LI+
Sbjct: 636 -----ESLREA-------DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 683
Query: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFY----LED-VLSILKSAESNHLDSAS--- 407
SAT+DA++F+ +FG P+ +PG T+PV + ED V + +K + HL A
Sbjct: 684 SATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDI 743
Query: 408 -LIVP-NEDPELTE----ENKSTLDEAISLA 432
+ +P ED E+T E+ L+ A +LA
Sbjct: 744 LIFMPGQEDIEVTSDQIVEHLEELENAPALA 774
>sp|Q04217|DHR1_YEAST Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ECM16 PE=1 SV=1
Length = 1267
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 186/371 (50%), Gaps = 55/371 (14%)
Query: 595 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPY 654
++PL+S++P+ +Q +VF++PP G R I++TN+AET++TI V YV+DSGR KE+ Y+
Sbjct: 731 VLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNES 790
Query: 655 NNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEEL 713
N V + + WVSKASA QR+GRAGR G CY LYS + F PEI R+P+E +
Sbjct: 791 NGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESI 850
Query: 714 CLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSV 773
LQ+K + + NI +F T PP V + AI +LQ +GAL E +TE G+K+ +
Sbjct: 851 VLQMKSMAIH-NIINFPFPT--PPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPL 907
Query: 774 HPLMSKMLFFAILMDCLDPALTLACASDYRDPFT---------LPISPN----------- 813
P SKML + CL + + A DPF + PN
Sbjct: 908 SPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFINEFELGINEISRKPNPDENLDDKIRE 967
Query: 814 ----------EKKRATAAKFELASLYGGQSDQ-------LAVIAAFECWKNAKQRGQEAW 856
E K+ +KF + + D+ L+V++A + + Q+
Sbjct: 968 HDESTPGMDPELKKELRSKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVP----KEQKEI 1023
Query: 857 FCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHN----ARVPGIIHAVLM-- 910
F + F+ +M ++ +RKQL +IK+ E+++ N + +P +I L+
Sbjct: 1024 FMKKNFLRGKLMEEIVKLRKQLMY-IIKSNTSKENIAVVIRNEDLKSDIPSVIQIKLLKQ 1082
Query: 911 ---AGLYPMVA 918
AG VA
Sbjct: 1083 MICAGFVDHVA 1093
Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 119/223 (53%), Gaps = 34/223 (15%)
Query: 180 QIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGET---- 235
+I + R +LP+ + I + N VV+I GETG GKTTQVPQFL E + ++
Sbjct: 383 EIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYP 442
Query: 236 CKIVCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLL 295
+ TQPRR++A S+AER++ E G++ G +GY+IR +S + + + F T+GVLLR +
Sbjct: 443 GMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREM 501
Query: 296 VSQGVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAII-----------RDML 344
+ ++ + II+DE HER+ +D ++ ++ ++
Sbjct: 502 MHDF--------------KLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENP 547
Query: 345 PSYPHLRLILMSATLDADRFSQ----YFGGCPVIQVPGFTYPV 383
+ L+LI+MSATL FS+ + PV+QV +PV
Sbjct: 548 IEHKKLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPV 590
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 217/446 (48%), Gaps = 38/446 (8%)
Query: 558 DSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
+ E+G +L+FL G E+I++ R+ + + IIPL+S +P QQ+++F+ PP
Sbjct: 346 EEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPP 405
Query: 616 PG------CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKAS 669
P RK+++STNIAET++TID VV+VID G K+K Y+P V +L + +SKAS
Sbjct: 406 PKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 670 AKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED 728
A+QRAGRAGR + G C+ LY++ + D PEI R + + LQ+K L I+D
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL----GIDD 521
Query: 729 FLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
+ +DPP T+ A+ +L + AL+ D +TELG + + P ++KM+ +
Sbjct: 522 LVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDY 581
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
+C + L++ F P KK A AK A + G L V AF
Sbjct: 582 NCSNEVLSITAMLSVPQCFVRPT--EAKKAADEAKMRFAHIDGDHLTLLNVYHAF----- 634
Query: 848 AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHA 907
KQ + +C F++ + +R+QL + + S + + I
Sbjct: 635 -KQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN--IRK 691
Query: 908 VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP-LMVYDEI 966
L+ G + VA L + G ++ V+LHP ++ D P ++Y+E
Sbjct: 692 ALVTGYFMQVAHLE---RTG-HYLTVKDNQVVQLHPSTV--------LDHKPEWVLYNEF 739
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLATE 992
++R CT + P L+ +A +
Sbjct: 740 VLTTKN-YIRTCTDIKPEWLVKIAPQ 764
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 126/208 (60%), Gaps = 15/208 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIV 239
I+++R +LP+ +KD T + +Q ++ GETG GKTTQ+PQ+ +E++ S G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E +G +GY IR E + + + T+G+LLR
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR------ 243
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
EA N P + II+DE HER +D ++ ++++++ L++I+MSATL
Sbjct: 244 -----EAMNDPLLERYGV---IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DA +F YF CP++ +PG T+PV+ FY
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 217/446 (48%), Gaps = 38/446 (8%)
Query: 558 DSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
+ E+G +L+FL G E+I++ R+ + + IIPL+S +P QQ+++F+ PP
Sbjct: 346 EEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPP 405
Query: 616 PG------CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKAS 669
P RK+++STNIAET++TID VV+VID G K+K Y+P V +L + +SKAS
Sbjct: 406 PKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 670 AKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED 728
A+QRAGRAGR + G C+ LY++ + D PEI R + + LQ+K L I+D
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL----GIDD 521
Query: 729 FLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
+ +DPP T+ A+ +L + AL+ D +TELG + + P ++KM+ +
Sbjct: 522 LVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDY 581
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
+C + L++ F P KK A AK A + G L V AF
Sbjct: 582 NCSNEVLSITAMLSVPQCFVRPT--EAKKAADEAKMRFAHIDGDHLTLLNVYHAF----- 634
Query: 848 AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHA 907
KQ + +C F++ + +R+QL + + S + + I
Sbjct: 635 -KQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN--IRK 691
Query: 908 VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP-LMVYDEI 966
L+ G + VA L + G ++ V+LHP ++ D P ++Y+E
Sbjct: 692 ALVTGYFMQVAHLE---RTG-HYLTVKDNQVVQLHPSTV--------LDHKPEWVLYNEF 739
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLATE 992
++R CT + P L+ +A +
Sbjct: 740 VLTTKN-YIRTCTDIKPEWLVKIAPQ 764
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 126/208 (60%), Gaps = 15/208 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIV 239
I+++R +LP+ +KD T + +Q ++ GETG GKTTQ+PQ+ +E++ S G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E +G +GY IR E + + + T+G+LLR
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR------ 243
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
EA N P + II+DE HER +D ++ ++++++ L++I+MSATL
Sbjct: 244 -----EAMNDPLLERYGV---IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DA +F YF CP++ +PG T+PV+ FY
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 216/444 (48%), Gaps = 38/444 (8%)
Query: 558 DSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPP 615
+ E+G +L+FL G E+I++ R+ + + IIPL+S +P QQ+++F+ PP
Sbjct: 346 EEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPP 405
Query: 616 PG------CRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKAS 669
P RK+++STNIAET++TID VV+VID G K+K Y+P V +L + +SKAS
Sbjct: 406 PKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 465
Query: 670 AKQRAGRAGRCQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIED 728
A+QRAGRAGR + G C+ LY++ + D PEI R + + LQ+K L I+D
Sbjct: 466 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL----GIDD 521
Query: 729 FLQ-KTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILM 787
+ +DPP T+ A+ +L + AL+ D +TELG + + P ++KM+ +
Sbjct: 522 LVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDY 581
Query: 788 DCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN 847
+C + L++ F P KK A AK A + G L V AF
Sbjct: 582 NCSNEVLSITAMLSVPQCFVRPT--EAKKAADEAKMRFAHIDGDHLTLLNVYHAF----- 634
Query: 848 AKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHA 907
KQ + +C F++ + +R+QL + + S + + I
Sbjct: 635 -KQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN--IRK 691
Query: 908 VLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSFKKTDDCP-LMVYDEI 966
L+ G + VA L + G ++ V+LHP ++ D P ++Y+E
Sbjct: 692 ALVTGYFMQVAHLE---RTG-HYLTVKDNQVVQLHPSTV--------LDHKPEWVLYNEF 739
Query: 967 TRGDGGMHVRNCTVVGPLPLLLLA 990
++R CT + P L+ +A
Sbjct: 740 VLTTKN-YIRTCTDIKPEWLVKIA 762
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 126/208 (60%), Gaps = 15/208 (7%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWS-KGETCKIV 239
I+++R +LP+ +KD T + +Q ++ GETG GKTTQ+PQ+ +E++ S G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 240 CTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQG 299
CTQPRR++A SVA+R++ E +G +GY IR E + + + T+G+LLR
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR------ 243
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
EA N P + II+DE HER +D ++ ++++++ L++I+MSATL
Sbjct: 244 -----EAMNDPLLERYGV---IILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATL 295
Query: 360 DADRFSQYFGGCPVIQVPGFTYPVKSFY 387
DA +F YF CP++ +PG T+PV+ FY
Sbjct: 296 DAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>sp|Q9W1I2|BGCN_DROME Benign gonial cell neoplasm protein OS=Drosophila melanogaster
GN=bgcn PE=1 SV=2
Length = 1215
Score = 166 bits (421), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 182/797 (22%), Positives = 340/797 (42%), Gaps = 91/797 (11%)
Query: 192 SFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSV 251
S D I ++ +++V++ + K+ +P +L+ +K KI+C + + I AT
Sbjct: 152 SLSDEILQSLYASRVIVYNAALCWDKSVFLPLVILDDCRNKKSNVKIMCIERQAILATYN 211
Query: 252 AERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPA 311
++R + GE +G+ +G ++ S + I++ T LR L SQ +
Sbjct: 212 SQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRSLTSQQFRNI-------- 263
Query: 312 KDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFG-G 370
+H++V+++H D Y+D +L+ IR L S+ +LR++L+S + +F+ +FG G
Sbjct: 264 -------SHLVVNDVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEG 316
Query: 371 CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELTEENKSTLDEAIS 430
+ + + YL ++ S + A + + E PE N
Sbjct: 317 LQLNMIKQPEVAPRVSYLNELHSCIALAGIHKGPD----IYKEIPEAFRANNP------- 365
Query: 431 LAWSNDEFDMLLELVSLEGS-----PNVY---------NYQHTLTGLTPLMVLAGKGRVG 476
N++ D L+ G+ P +Y NY+H+LTG T + + +
Sbjct: 366 ---RNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYRHSLTGKTAVHFASELNKAN 422
Query: 477 DVCMLLSLGADCQLKAKDGRTALQLGEQENQPEVAQIIKKHMENALSDSMKQQLLDKYLA 536
+ +LL +GAD + + A+ L E ++ + L +
Sbjct: 423 HLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSY-----------SLHGYVVK 471
Query: 537 TVNPELIDLVLIEQLLRKICMDSE-------DGAILVFLPGWEDINKTRDRLLANPFFRD 589
+ P+ +D LI ++ + E G IL+ LP + I K +L++
Sbjct: 472 SAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILSHCLTGS 531
Query: 590 TSKFVIIPLH-SMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKE 648
+ I L+ +M Q V K++L+T+I E+ Y ID+
Sbjct: 532 LQECSIFLLYDNMRNDYLQALV--NASDETVKVVLATDIIESLCLKVPFKYQIDTACRLN 589
Query: 649 KSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGI-CYHLYSQLRAASLPDFQVPEIKR 707
YD + + WV+K + +R + + C+ L S+ L + P ++
Sbjct: 590 NVYDTTSCSGDDRFEWVAKDALLRRELILQPNKGDVQCFRLISKEAYEELSETSQPSLQT 649
Query: 708 IPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGEK 767
+ ++++CL VKLL PN I ++L T+ PP + + +A+ L+ I L E VT LG +
Sbjct: 650 MQLDKICLAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCR 709
Query: 768 LGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISP---NEKKRAT----- 819
L + V + +ML F IL+ CLDP LT+ + DP +P + N R T
Sbjct: 710 LMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTIYIQN 769
Query: 820 AAKFELASLYGGQ-SDQLAVIAAFECWKN-AKQRGQEAWFCSQY-FVSSGVMNMLLGMRK 876
+ K E L Q SD + ++ W+N R + +Y F+ +G+M L +R
Sbjct: 770 SIKKERTYLSDNQFSDHFIFVRLYKEWQNRMHNRTPPLYLKDEYEFMLNGLMEQLTSIRS 829
Query: 877 QLQTELIKNGFIP-------EDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR 929
++ + L I +++ S N ++ A L G+YP + + +
Sbjct: 830 EIVSSLRAANLIHSRGKLSMNNLNQMSCNWH---MVKAALTGGMYPNIYAV----DTRKS 882
Query: 930 FVETAGGAKVRLHPHSL 946
+++A V +HP+++
Sbjct: 883 SLKSAFSGNVSMHPNTV 899
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 194/395 (49%), Gaps = 25/395 (6%)
Query: 561 DGAILVFLPGWEDINKTRDRLLANPFFRDTSK-FVIIPLHSMVPSVQQKKVFKRPPPGCR 619
DG IL+F+PG EDI T + + D + ++P++S +PS Q K+F+R P G R
Sbjct: 650 DGDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMR 709
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K I++TNIAET++T+D +++VID G K K Y+P + L VS+ASA QR GRAGR
Sbjct: 710 KAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGR 769
Query: 680 CQAGICYHLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQ-KTLDPP 737
G CY LY++ + L VPEI+R + + L +K L ++D L+ +D P
Sbjct: 770 TGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSL----GVDDLLKFHFMDAP 825
Query: 738 VSVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTLA 797
+ N++ L +GAL ++T +G K+ + P +SKML + M C D LT+
Sbjct: 826 PQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIV 885
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQRGQEAWF 857
F P E+ A KF++ +SD L + + W+ K + +
Sbjct: 886 SMLSVPAIFFRPKGREEEADAKKEKFQVP-----ESDHLTFLNVYIQWRTHKYSAK---W 937
Query: 858 CSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGLYPMV 917
C+ ++ + + +R QL+ E++++ +P N I+ + + +
Sbjct: 938 CADNYLHVKALKKVREVRAQLK-EIMQDLKLP-----LISNGSEWDIVRKCICSAYFHNA 991
Query: 918 ARLRPPHKNGRRFVETAGGAKVRLHPHSLNFKLSF 952
ARL K +V G LHP S F + F
Sbjct: 992 ARL----KGIGEYVNVRTGIPCFLHPTSALFGMGF 1022
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 156/269 (57%), Gaps = 31/269 (11%)
Query: 179 RQIVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKI 238
+ I ++R LP+ + + + + + N VV+I GETG GKTTQ+ Q+LLE + G++ I
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF--GDSGLI 489
Query: 239 VCTQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQ 298
CTQPRR++A SVA R++ E G ++G ++GY IR E + + I + T+G+LLR +
Sbjct: 490 GCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGD 549
Query: 299 GVSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSAT 358
G + D SA II+DE HER +D + ++R+++ L+LI+ SAT
Sbjct: 550 G-----------SLDQYSA---IIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSAT 595
Query: 359 LDADRFSQYFGG-CPVIQVPGFTYPVKSFY----LED-VLSILKSAESNHLDSAS----L 408
+DAD+F+ +FGG CP +PG T+PV+ F+ +ED V + +K A + HL +
Sbjct: 596 MDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILI 655
Query: 409 IVPNEDP-----ELTEENKSTLDEAISLA 432
+P ++ E+ +E LDEA LA
Sbjct: 656 FMPGQEDIECTCEMIKEKLGELDEAPPLA 684
>sp|B8A4F4|TDRD9_DANRE Putative ATP-dependent RNA helicase TDRD9 OS=Danio rerio GN=tdrd9
PE=2 SV=1
Length = 1342
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 157/303 (51%), Gaps = 18/303 (5%)
Query: 560 EDGAILVFLPGWEDINKTRDRLLANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
E G++LVFLPG +I ++ L + R + + PLHS V +Q VF P PG R
Sbjct: 343 ERGSVLVFLPGLAEIQYMKEAL--SKLVRK--RLQVYPLHSTVTLEEQNGVFLVPVPGYR 398
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
KIILSTNIAE+++T+ DV YVID +++ + D N L+ +W SK S QR GRAGR
Sbjct: 399 KIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGR 458
Query: 680 CQAGICYHLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
G CY L ++ +P+F +PE+ R P+ L+VKLLD + L L PP+
Sbjct: 459 VSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMG-DPRSVLSTALTPPI 517
Query: 739 SVTIRNAIIVLQDIGALS--------LDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCL 790
I ++ L+ IGALS D +T LG L L V + K++ + CL
Sbjct: 518 LGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCL 577
Query: 791 DPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKNAKQ 850
+ L +A + + F +P ++ + +L+ SD +A + AF+ W ++
Sbjct: 578 EECLIIAASLSLKSFFAMP----SLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAWYTSRA 633
Query: 851 RGQ 853
+G+
Sbjct: 634 KGE 636
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 152/261 (58%), Gaps = 32/261 (12%)
Query: 188 LPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRIS 247
LPI+ + + S +++N VV+I G TG GKTTQ+PQF+L+H + C +V TQPR+I
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHYAERNIPCNLVVTQPRKIG 148
Query: 248 ATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEAS 307
ATS+A ++ ER +G +GY++ LE +H+ +++ T GVLL+ LVS
Sbjct: 149 ATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVS---------- 198
Query: 308 NKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYP-HLRLILMSATLDADRFSQ 366
++ +HI +DE+HER DF+L ++R +L S ++++ILMSAT++ F++
Sbjct: 199 ----SKTLTEYSHIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAE 254
Query: 367 YFGG--------CPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDPELT 418
YFG V +V G Y V+ +YL+++ ++L + LD L +P +DP +T
Sbjct: 255 YFGSPIRNQMNPAYVFEVEGAPYAVEEYYLDELKTMLPVGVN--LD---LTLP-QDPYIT 308
Query: 419 EENKSTLDEAISLAWSNDEFD 439
EE + A+SL S DE +
Sbjct: 309 EE---MYNVAVSLIQSFDEME 326
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 142/244 (58%), Gaps = 22/244 (9%)
Query: 145 GKRVDIFCKPKMSKAEIAMKVESLTS-RIEKDANLRQIVEERSKLPISSFKDVITSTVDS 203
+++D K+S AE + + +T ++EK + R LP+ +KD + ++
Sbjct: 380 SQQIDFLLDTKLS-AENPVDTDKMTDVKVEKS-----LESSRKSLPVYQYKDDLLKAINE 433
Query: 204 NQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQPRRISATSVAERISVERGENI 263
QV+LI ETG GKTTQ+PQFL E ++KG KI CTQPRR++A SVA R++ E +
Sbjct: 434 YQVLLIVAETGSGKTTQLPQFLHEAGYTKGNK-KICCTQPRRVAAMSVAARVAKEMDVRL 492
Query: 264 GDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSRLKEASNKPAKDDVSALTHIIV 323
G +GY IR E+ + + I + T+G+LLR +++ D+++ + II+
Sbjct: 493 GQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEP--------------DLASYSVIII 538
Query: 324 DEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDADRFSQYFGGCPVIQVPGFTYPV 383
DE HER ++D + +++D+ P L++++ SAT+DA++FS YF PV VPG YPV
Sbjct: 539 DEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPV 598
Query: 384 KSFY 387
+Y
Sbjct: 599 DIYY 602
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 193/392 (49%), Gaps = 31/392 (7%)
Query: 562 GAILVFLPGWEDINKTRDRL--LANPFFRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCR 619
G ILVFL G ++I + + L + + ++ P+++ +PS Q K+F PPG R
Sbjct: 628 GDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGAR 687
Query: 620 KIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGR 679
K++L+TNIAET+ITID V +VIDSG +K+ Y+P + +L S S+ASA QRAGRAGR
Sbjct: 688 KVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGR 747
Query: 680 CQAGICYHLYSQLRAASLPDFQV-PEIKRIPIEELCLQVKLLDPNCNIEDFLQKTLDPPV 738
G C+ LY++ + D PEI+R + + L +K L N N+ DF +D P
Sbjct: 748 VGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGIN-NLLDF--DFMDAPP 804
Query: 739 SVTIRNAIIVLQDIGALSLDEKVTELGEKLGCLSVHPLMSKMLFFAILMDCLDPALTL-A 797
T+ ++ +L +GAL+ ++T+LG ++ P++SK L + C++ L++ +
Sbjct: 805 PETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVS 864
Query: 798 CASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAAFECWKN---AKQRGQE 854
+ F P K + A A+ D L ++ + W + + +E
Sbjct: 865 MLGEASSLFYRP-----KDKIMEADKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWARE 919
Query: 855 AWFCSQYFV-SSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARVPGIIHAVLMAGL 913
+ + + V + L + ++++ EL+ N SS S + I + AG
Sbjct: 920 NFLQYKSLCRARDVRDQLANLCERVEIELVTN-------SSESLDP-----IKKAITAGY 967
Query: 914 YPMVARLRPPHKNGRRFVETAGGAKVRLHPHS 945
+ ARL ++G + V +HP S
Sbjct: 968 FSNAARL---DRSGDSYRTVKSNQTVYIHPSS 996
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 232/463 (50%), Gaps = 36/463 (7%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I + + + KI DG +L FL G E++ L+ A R
Sbjct: 249 YLQSPVPDYIKSTV--ETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K +
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L VS+ASA QRAGR GR ++G CY LY++ LP VPE++R
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 426
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKL 768
+ + LQ+K L + N+ F + PP + ++ A+ +L +G L D ++TE LG ++
Sbjct: 427 LAPVILQLKALGID-NVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRI 483
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
++P+ +KML + C L++A ++ F +P PN+K A + A
Sbjct: 484 AEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP--PNQKSHAIRVHRKFAVE 541
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
G D L ++ +E + K W C ++F++ + +R+QL+ L+K +
Sbjct: 542 EG---DHLTMLNIYEAF--IKHNKDSKW-CQEHFLNYKGLVRAATVREQLKKLLVKFQ-V 594
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
P S P ++ +++G + AR H G + ++ +HP S+ +
Sbjct: 595 PRKSSEGD-----PDLVLRCIVSGFFANAARF---HSTG-AYRTIRDDHELHIHPASVLY 645
Query: 949 KLSFKKTDDCP-LMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+ P ++Y+E+ + ++R+ T + LL LA
Sbjct: 646 ------AEKPPRWVIYNEVIQ-TSKYYMRDVTAIESAWLLELA 681
Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 126/220 (57%), Gaps = 26/220 (11%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I ++R KLP+ ++ I +++ Q V+I GETGCGK+TQ+PQ+L E W+ E +
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWT-AEGRVVGV 105
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLVSQG 299
TQPRR++A +VA R++ ERG +G +GY IR + + ++ I F T+G+L+R ++
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 165
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+ ++ + I++DE HER Y+D + +++ + LRLI+ SATL
Sbjct: 166 L--------------LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 360 DADRFSQYFG----------GCPVIQVPGFTYPVKSFYLE 389
DAD+F +F C ++ V G T+PV FYL+
Sbjct: 212 DADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 234/463 (50%), Gaps = 36/463 (7%)
Query: 534 YLATVNPELIDLVLIEQLLRKICMDSEDGAILVFLPGWEDINKTRDRLL--ANPFFRDTS 591
YL + P+ I + + + KI DG IL FL G E++ L+ A R
Sbjct: 249 YLQSPVPDYIKSTV--ETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 592 K--FVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEK 649
K ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K +
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 650 SYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIKRIP 709
+Y+P + L VS+ASA QRAGR GR ++G CY LY++ LP VPE++R
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 426
Query: 710 IEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTE-LGEKL 768
+ + LQ+K L + N+ F + PP + ++ A+ +L +G L D ++TE LG ++
Sbjct: 427 LAPVILQLKALGID-NVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRI 483
Query: 769 GCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASL 828
++P+ +KML + C L++A ++ F +P PN+K +A + A
Sbjct: 484 AEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP--PNQKSQAIRVHRKFAVE 541
Query: 829 YGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFI 888
G D L ++ +E + + Q +C ++F++ + +R+QL+ L+K +
Sbjct: 542 EG---DHLTMLNVYEAFIKHNKNSQ---WCQEHFLNYKGLVRAATVREQLKKLLVKFQ-V 594
Query: 889 PEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
P+ S P + +++G + AR H G + ++ +HP S+ +
Sbjct: 595 PKKSSEGD-----PDPVLRCIVSGFFANAARF---HSTG-AYRTIRDDHELHIHPASVLY 645
Query: 949 KLSFKKTDDCP-LMVYDEITRGDGGMHVRNCTVVGPLPLLLLA 990
+ P ++Y+E+ + ++R+ T + LL LA
Sbjct: 646 ------AEKPPRWVIYNEVIQ-TSKYYMRDVTAIESAWLLELA 681
Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 126/220 (57%), Gaps = 26/220 (11%)
Query: 181 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240
I ++R KLP+ ++ I +++ Q V+I GETGCGK+TQ+PQ+L E W+ E +
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWT-AEGRVVGV 105
Query: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSS-IVFCTNGVLLRLLVSQG 299
TQPRR++A +VA R++ ERG +G +GY IR + + ++ I F T+G+L+R ++
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 165
Query: 300 VSRLKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATL 359
+ ++ + I++DE HER Y+D + +++ + LRLI+ SATL
Sbjct: 166 L--------------LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 360 DADRFSQYFG----------GCPVIQVPGFTYPVKSFYLE 389
DAD+F +F C ++ V G T+PV FYL+
Sbjct: 212 DADKFRDFFNQNETSDPARDTCVILTVGGRTFPVDIFYLQ 251
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 212/407 (52%), Gaps = 41/407 (10%)
Query: 554 KICMDSEDGAILVFLPGWEDINKT------RDRLLANPFFRDTSKFVIIPLHSMVPSVQQ 607
+I + G ILVFL G E+I+ + R ++L + + VI+P++S +PS Q
Sbjct: 712 QIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSI----PELVILPVYSALPSEIQ 767
Query: 608 KKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSK 667
++F+ PPG RK++++TNIAET++TID + YV+D G +K+ +DP + +L + +S+
Sbjct: 768 SRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQ 827
Query: 668 ASAKQRAGRAGRCQAGICYHLYSQ--LRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCN 725
A A+QR+GRAGR G CY LY++ R LP +PEI+R + L +K +
Sbjct: 828 AQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPS-PIPEIQRQNLSHTILMLKAM----G 882
Query: 726 IEDFLQ-KTLDPPVSVTIRNAIIVLQDIGALS-LDEK--VTELGEKLGCLSVHPLMSKML 781
I D L +DPP + T+ I LQ++ ALS LD++ +T LG K+ + P +SK+L
Sbjct: 883 INDLLNFDFMDPPPAQTM---IAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVL 939
Query: 782 FFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELASLYGGQSDQLAVIAA 841
++ + C + L++ + ++ P +++ A + A +SD L ++
Sbjct: 940 ITSVELGCSEEMLSIIAMLSVPNIWSRP-----REKQQEADRQRAQFANPESDHLTLLNV 994
Query: 842 FECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNGFIPEDVSSCSHNARV 901
+ WK R + W C ++++ + M +RKQL L+ P V SC R
Sbjct: 995 YTTWK--MNRCSDNW-CYEHYIQARGMRRAEDVRKQL-IRLMDRYRHP--VVSC---GRK 1045
Query: 902 PGIIHAVLMAGLYPMVARLRPPHKNGRRFVETAGGAKVRLHPHSLNF 948
+I L +G + VA+ R H+ + + A V +HP + F
Sbjct: 1046 RELILRALCSGYFTNVAK-RDSHEGCYKTI--VENAPVYMHPSGVLF 1089
Score = 157 bits (396), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 132/228 (57%), Gaps = 22/228 (9%)
Query: 183 EERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVCTQ 242
E+R LP+ + V NQ++++ GETG GKTTQ+ Q+L E ++ ++ I CTQ
Sbjct: 505 EQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYT-SDSKMIGCTQ 563
Query: 243 PRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGVSR 302
PRR++A SVA+R++ E G +G+ +GY IR E K + + I + T+G+L R + +
Sbjct: 564 PRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPL-- 621
Query: 303 LKEASNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATLDAD 362
+S + II+DE HER +D + +++ + P L+LI+ SATLDA+
Sbjct: 622 ------------LSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAE 669
Query: 363 RFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIV 410
RFS YF CP+ +PG +YPV+ Y K E+++LD+A + V
Sbjct: 670 RFSSYFYKCPIFTIPGRSYPVEIMY-------TKQPEADYLDAALMTV 710
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 454,504,263
Number of Sequences: 539616
Number of extensions: 19670631
Number of successful extensions: 134320
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 231
Number of HSP's that attempted gapping in prelim test: 122720
Number of HSP's gapped (non-prelim): 7506
length of query: 1225
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1096
effective length of database: 121,958,995
effective search space: 133667058520
effective search space used: 133667058520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)