Query 000922
Match_columns 1223
No_of_seqs 732 out of 6474
Neff 9.0
Searched_HMMs 29240
Date Tue Mar 26 17:17:18 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000922.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_690-693//hhsearch_pdb/000922hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a5y_B CED-4; apoptosis; HET: 1.0 1 1 361.3 18.3 299 243-552 131-472 (549)
2 3ozi_A L6TR; plant TIR domain, 1.0 1 1 348.5 11.9 172 57-230 27-200 (204)
3 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 347.7 25.6 306 234-551 118-452 (1249)
4 3jrn_A AT1G72930 protein; TIR 1.0 1 1 346.8 12.0 172 60-236 3-175 (176)
5 1vt4_I APAF-1 related killer D 1.0 1 1 305.1 21.7 297 239-567 127-454 (1221)
6 1z6t_A APAF-1, apoptotic prote 1.0 1 1 300.8 23.7 302 234-548 118-449 (591)
7 3rgz_A Protein brassinosteroid 1.0 1 1 291.3 23.6 363 601-975 174-555 (768)
8 3rgz_A Protein brassinosteroid 1.0 1 1 290.5 27.7 338 638-975 178-531 (768)
9 4eco_A Uncharacterized protein 1.0 1 1 281.5 21.5 237 728-969 331-598 (636)
10 4ecn_A Leucine-rich repeat pro 1.0 1 1 280.7 27.1 311 653-969 481-838 (876)
No 1
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A*
Probab=1.00 E-value=1 Score=361.32 Aligned_cols=299 Identities=17% Similarity=0.169 Sum_probs=235.6
Q ss_pred EEHHHHHHHHHHHHHCC-CCCEEEEEEECCCCCCHHHHHHHHHH----HHHHCCCCCEEEEECHHHHCCCCHHHHHHHHH
Q ss_conf 10022799999966059-99909999970599826799999999----87604685034320034430379799999999
Q 000922 243 VGIYSRIEQIKSLLCVG-LPDFQIIGIWGMGGIGKTTIAGAIFN----QISNDFEGRCFMANVREESERGGLVYLRERLY 317 (1223)
Q Consensus 243 vGr~~~~~~l~~~L~~~-~~~~~vv~I~G~gGiGKTtLA~~v~~----~~~~~F~~~~~~~~~~~~s~~~~l~~l~~~ll 317 (1223)
|||+.++++|.++|..+ ..+.++|+|+||||+||||||+++|+ +++.+|++++|+ +++.... .++..+++.++
T Consensus 131 ~GR~~~~~~l~~~L~~~~~~~~~vv~I~G~gGvGKTtLA~~v~~~~~~~~~~~F~~~~wv-~vs~~~~-~~~~~~~~~il 208 (549)
T 2a5y_B 131 YIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWL-KDSGTAP-KSTFDLFTDIL 208 (549)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEE-ECCCCST-THHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE-EECCCCC-CCHHHHHHHHH
T ss_conf 784179999999872515789628999869999889999999984069874669957999-9789878-79999999999
Q ss_pred HHHHHHCC--CCCCCC-----C-HHHHHHHHHCC-EEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCC
Q ss_conf 99852103--767999-----3-68999998069-089996189998889998448898799977999928912331049
Q 000922 318 SEILEETL--KIRTPS-----V-PKCIKERLQQM-KVFVVLDDVNKPEQLDYLAGGLDRFGLGSRVVVTSRDRQVFDKCR 388 (1223)
Q Consensus 318 ~~~~~~~~--~~~~~~-----~-~~~l~~~L~~k-r~LiVLDdv~~~~~~~~l~~~~~~~~~gs~IIiTTR~~~v~~~~~ 388 (1223)
.++..... ...+.+ . ...+++.|+++ |+||||||||+.+++ .+.. .+||+||||||++.++..++
T Consensus 209 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~kr~LlVLDdv~~~~~~-~~~~-----~~gs~ilvTTR~~~v~~~~~ 282 (549)
T 2a5y_B 209 LMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETI-RWAQ-----ELRLRCLVTTRDVEISNAAS 282 (549)
T ss_dssp HHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHHHH-HHHH-----HTTCEEEEEESBGGGGGGCC
T ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH-CCCC-----CCCCEEEEECCCHHHHHHCC
T ss_conf 99853755345555331469999999999976898489999799971441-5432-----69988999749779999708
Q ss_pred -CCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH-HCCCCC
Q ss_conf -882699068998889999988342089998249999999999928992478998754126798999999862-014998
Q 000922 389 -VDKIYEVEGLNQNEALEHFSNYAFRQNICPKDFLVLSERIVFYANGNPLALKVLGSFLQRKCKLQWENALKN-LTRISD 466 (1223)
Q Consensus 389 -~~~~~~l~~L~~~ea~~Lf~~~af~~~~~~~~~~~l~~~i~~~~~G~PLal~~lg~~L~~~~~~~w~~~l~~-l~~~~~ 466 (1223)
...+|++++|+.++|++||.++||.... .+.+.+++.+|+++|+|+|||++++|+.|+.+. .+|...+.. +.....
T Consensus 283 ~~~~~~~l~~L~~~ea~~Lf~~~a~~~~~-~~~~~~~~~~I~~~c~GlPLAl~~~g~~l~~~~-w~~~~~l~~~l~~~~~ 360 (549)
T 2a5y_B 283 QTCEFIEVTSLEIDECYDFLEAYGMPMPV-GEKEEDVLNKTIELSSGNPATLMMFFKSCEPKT-FEKMAQLNNKLESRGL 360 (549)
T ss_dssp SCEEEEECCCCCHHHHHHHHHHTSCCCC---CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSSS-HHHHHHHHHHHHHHCS
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH-HHHHHHHHHHHHCCCH
T ss_conf 89738989998989999999987448998-556899999999995998399999999844344-8999875787613647
Q ss_pred CCHHHHHHHHHHCCCHHHHHHHH-----------EEECCCCCCCHHHHHHHHCC----------C--C-CHHHHHHHHHH
Q ss_conf 73776998857204186786741-----------02024489997899998629----------9--9-77765899872
Q 000922 467 PDIYDMLKISYNELKQEEKSIFL-----------DIACFFKGDDKDFMTRIQDD----------P--E-SVHYGLNVLVD 522 (1223)
Q Consensus 467 ~~i~~~l~~sy~~L~~~~k~~fl-----------~~a~f~~~~~~~~~~~~l~~----------~--~-~~~~~l~~L~~ 522 (1223)
..+..++++||+.|+.+.|.||+ +||+||+++.++ +..|.+. . . .+...++.|++
T Consensus 361 ~~i~~~l~~Sy~~L~~~lk~~f~~Ls~~er~l~~~ls~fp~~~~i~-i~~w~a~~~G~i~~~~~~~~~~~~~~~l~~L~~ 439 (549)
T 2a5y_B 361 VGVECITPYSYKSLAMALQRCVEVLSDEDRSALAFAVVMPPGVDIP-VKLWSCVIPVDICSNEEEQLDDEVADRLKRLSK 439 (549)
T ss_dssp STTCCCSSSSSSSHHHHHHHHHHTSCHHHHHHTTGGGSSCTTCCEE-HHHHHHHSCC-------CCCTHHHHHHHHHTTT
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHEEEECCCCEEE-EEEEEEECCCEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 7789897516202267999997526522336743235608997666-533110135500267789999999999999987
Q ss_pred CCCEEEECC---CEEEECHHHHHHHHHHHHHCC
Q ss_conf 566289349---939952889999999976205
Q 000922 523 KSLVALSCN---NKLQIHDLLQEFGREIVRQQS 552 (1223)
Q Consensus 523 ~~Li~~~~~---~~~~mHdli~~~~~~i~~~~~ 552 (1223)
+||++.... .++.|||++|+|+++++.+++
T Consensus 440 rsLl~~~~~~~~~~~~mHdlv~~~a~~~~~~~~ 472 (549)
T 2a5y_B 440 RGALLSGKRMPVLTFKIDHIIHMFLKHVVDAQT 472 (549)
T ss_dssp BSSCSEEECSSSCEEECCHHHHHHHHTTSCTHH
T ss_pred CCCEEEECCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 588367147980499967699999999988989
No 2
>3ozi_A L6TR; plant TIR domain, plant protein; 2.30A {Linum usitatissimum}
Probab=1.00 E-value=1 Score=348.51 Aligned_cols=172 Identities=42% Similarity=0.749 Sum_probs=163.2
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHH
Q ss_conf 78898997324998172343456448999999961997510048-77889876089999976333699993267445155
Q 000922 57 SSCLAAQCKYDVFVSFRGEDTRDNFTSHLVAALCRKKIKTFIDE-QLDRGDDISPALLDAIERSKISVIIFSENYASSKW 135 (1223)
Q Consensus 57 ~~~~~~~~~~dvFis~~~~d~~~~f~~~l~~~L~~~g~~~~~d~-~~~~g~~~~~~~~~ai~~s~~~ivv~S~~y~~s~w 135 (1223)
+|++.+.++|||||||+|+|+|++|++||+.+|+++||++|+|+ ++++|+.|.++|.+||++|+++|+|||++|++|.|
T Consensus 27 ~s~~~~~~~yDVFISfrg~D~r~~Fv~~L~~aL~~~GI~~f~D~~el~~G~~I~~~l~~aIe~Sri~IvV~S~nYa~S~W 106 (204)
T 3ozi_A 27 PSGSFPSVEYEVFLSFRGPDTREQFTDFLYQSLRRYKIHTFRDDDELLKGKEIGPNLLRAIDQSKIYVPIISSGYADSKW 106 (204)
T ss_dssp -------CCCCEEEEECHHHHTTTHHHHHHHHHHHTTCCEEEEETTTCCGGGTTTTHHHHHHHCSEEEEEECTTGGGCHH
T ss_pred CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCH
T ss_conf 76778885774999653647778799999999997899589848766787704799999998484766887755325747
Q ss_pred HHHHHHHHHHHHHC-CCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 49999999997612-99779989965078632223464246899988651598367999999999972057988888714
Q 000922 136 CLDELVKILECKNK-NAQMVVPVFYHVDPSDVRKQTGSFGDAFVKHEKQFKGIPEKVQKWRVVLTEASNLSGWDSMNIRP 214 (1223)
Q Consensus 136 cl~El~~i~~~~~~-~~~~vlpvfy~v~ps~vr~~~g~~~~~~~~~~~~~~~~~~~i~~w~~al~~~a~~~g~~~~~~~~ 214 (1223)
|++||++|++|.+. ++++|+||||+|+|++||+|+|+||++|++|++++ ..+++++||.||+++|+++||++.++..
T Consensus 107 Cl~EL~~I~e~~~~~~~~~ViPIFY~VdPs~Vr~q~g~fg~af~~~~~~~--~~~~v~~Wr~AL~~va~lsG~~~~~~~~ 184 (204)
T 3ozi_A 107 CLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANKF--DGQTIQNWKDALKKVGDLKGWHIGKNDK 184 (204)
T ss_dssp HHHHHHHHHHHHHHCTTSEECCEEESSCHHHHHHTCTTHHHHHHHHTTTS--CHHHHHHHHHHHHHHHTSCBEEECTTSC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHCCCCHHHHHHHHHHHH--CHHHHHHHHHHHHHHHCCCCEECCCCCC
T ss_conf 89999999998875177035779960688997741241999999999861--7889999999999984667563289998
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 6899999999998511
Q 000922 215 EAKLVDEIIEDILKKL 230 (1223)
Q Consensus 215 e~~~i~~i~~~i~~~l 230 (1223)
|+++|++|+++|++++
T Consensus 185 e~~~i~~Iv~di~~kl 200 (204)
T 3ozi_A 185 QGAIADKVSADIWSHI 200 (204)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999873
No 3
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=347.67 Aligned_cols=306 Identities=21% Similarity=0.289 Sum_probs=238.7
Q ss_pred CCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH---HHHCCCCCEEEEECHHHHCCCCHH
Q ss_conf 77877787210022799999966059999099999705998267999999998---760468503432003443037979
Q 000922 234 SFSSDFEGLVGIYSRIEQIKSLLCVGLPDFQIIGIWGMGGIGKTTIAGAIFNQ---ISNDFEGRCFMANVREESERGGLV 310 (1223)
Q Consensus 234 ~~~~~~~~~vGr~~~~~~l~~~L~~~~~~~~vv~I~G~gGiGKTtLA~~v~~~---~~~~F~~~~~~~~~~~~s~~~~l~ 310 (1223)
..|.....||||+.++++|.++|.....+.++|+|+||||+||||||+++|++ ....|...+||..++... ...+.
T Consensus 118 ~~p~~~~~~vgR~~~~~~l~~~l~~~~~~~~~v~i~G~gG~GKTtLa~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~ 196 (1249)
T 3sfz_A 118 GVPQRPVIFVTRKKLVHAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFSGGVHWVSIGKQD-KSGLL 196 (1249)
T ss_dssp TCCCCCSSCCCCHHHHHHHHHHHHTTTTSCEEEEEECSTTSSHHHHHHHHTCCHHHHTTTSTTCEEEEECCSCC-HHHHH
T ss_pred CCCCCCCEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCC-CHHHH
T ss_conf 97999864125799999999998613588777999918988888999998607567886278817999978857-26799
Q ss_pred HHHHHHHHHHHHHCCCCCCCC-CHH----HHHHHHHCC--EEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHH
Q ss_conf 999999999852103767999-368----999998069--0899961899988899984488987999779999289123
Q 000922 311 YLRERLYSEILEETLKIRTPS-VPK----CIKERLQQM--KVFVVLDDVNKPEQLDYLAGGLDRFGLGSRVVVTSRDRQV 383 (1223)
Q Consensus 311 ~l~~~ll~~~~~~~~~~~~~~-~~~----~l~~~L~~k--r~LiVLDdv~~~~~~~~l~~~~~~~~~gs~IIiTTR~~~v 383 (1223)
.....++..+........... ... .++..+.++ |+||||||||+..+++.+ ++||+||||||++.+
T Consensus 197 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~LlvlDd~~~~~~~~~~-------~~~~~ilvTtR~~~~ 269 (1249)
T 3sfz_A 197 MKLQNLCMRLDQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLLILDDVWDPWVLKAF-------DNQCQILLTTRDKSV 269 (1249)
T ss_dssp HHHHHHHHHHTTTCTTCSSCCSSHHHHHHHHHHHTSSSSCSCEEEEESCCCHHHHTTT-------CSSCEEEEEESSTTT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH-------CCCCEEEEECCCHHH
T ss_conf 9999999986553033347887778999999999735678789999567997788763-------689789999277899
Q ss_pred HHH-CCCCCEEEECC-CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 310-49882699068-9988899999883420899982499999999999289924789987541267989999998620
Q 000922 384 FDK-CRVDKIYEVEG-LNQNEALEHFSNYAFRQNICPKDFLVLSERIVFYANGNPLALKVLGSFLQRKCKLQWENALKNL 461 (1223)
Q Consensus 384 ~~~-~~~~~~~~l~~-L~~~ea~~Lf~~~af~~~~~~~~~~~l~~~i~~~~~G~PLal~~lg~~L~~~~~~~w~~~l~~l 461 (1223)
+.. .+....++++. |+.+||++||...++.. .+.+.+.+++|+++|+|+||||+++|++|+.+. .+|...++.+
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~a~~l~~~~~~~~---~~~~~~~~~~i~~~~~glPLal~~~~~~l~~~~-~~~~~~l~~l 345 (1249)
T 3sfz_A 270 TDSVMGPKHVVPVESGLGREKGLEILSLFVNMK---KEDLPAEAHSIIKECKGSPLVVSLIGALLRDFP-NRWAYYLRQL 345 (1249)
T ss_dssp TTTCCSCBCCEECCSSCCHHHHHHHHHHHHTSC---STTCCTHHHHHHHHTTTCHHHHHHHHHHHHHSS-SCHHHHHHHH
T ss_pred HHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCC---HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCH-HHHHHHHHHH
T ss_conf 876348843798258888788999999865798---134838899999984997799999999862480-5799999998
Q ss_pred CCCCC-----------CCHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCH--HHHHHHHCCCC-CHHHHHHHHHHCCCEE
Q ss_conf 14998-----------7377699885720418678674102024489997--89999862999-7776589987256628
Q 000922 462 TRISD-----------PDIYDMLKISYNELKQEEKSIFLDIACFFKGDDK--DFMTRIQDDPE-SVHYGLNVLVDKSLVA 527 (1223)
Q Consensus 462 ~~~~~-----------~~i~~~l~~sy~~L~~~~k~~fl~~a~f~~~~~~--~~~~~~l~~~~-~~~~~l~~L~~~~Li~ 527 (1223)
..... ..+..+|.+||+.|++++|.||+++|+||+++.+ +.+..+|...+ .++..++.|++++|++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~l~~s~~~L~~~~~~~~~~l~~f~~~~~i~~~~~~~~~~~~~~~~~~~l~~L~~~sl~~ 425 (1249)
T 3sfz_A 346 QNKQFKRIRKSSSYDYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVNKSLLF 425 (1249)
T ss_dssp HSCCCCCSSCTTCTTHHHHHHHHHHHHHTSCTTTHHHHHHGGGSCTTCCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSCE
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
T ss_conf 65044303465564467799999989986799999999972813799751899999885898889999999997446338
Q ss_pred EECCCE---EEECHHHHHHHHHHHHHC
Q ss_conf 934993---995288999999997620
Q 000922 528 LSCNNK---LQIHDLLQEFGREIVRQQ 551 (1223)
Q Consensus 528 ~~~~~~---~~mHdli~~~~~~i~~~~ 551 (1223)
...++. +.||+++|+++++...++
T Consensus 426 ~~~~~~~~~~~~h~l~~~~~~~~~~~~ 452 (1249)
T 3sfz_A 426 CNRNGKSFCYYLHDLQVDFLTEKNRSQ 452 (1249)
T ss_dssp EEESSSSEEEECCHHHHHHHHHHTGGG
T ss_pred EECCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf 963798118996689999987450678
No 4
>3jrn_A AT1G72930 protein; TIR domain arabidopsis thaliana, plant protein; 2.00A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=346.79 Aligned_cols=172 Identities=47% Similarity=0.750 Sum_probs=163.5
Q ss_pred CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHH
Q ss_conf 98997324998172343456448999999961997510048-77889876089999976333699993267445155499
Q 000922 60 LAAQCKYDVFVSFRGEDTRDNFTSHLVAALCRKKIKTFIDE-QLDRGDDISPALLDAIERSKISVIIFSENYASSKWCLD 138 (1223)
Q Consensus 60 ~~~~~~~dvFis~~~~d~~~~f~~~l~~~L~~~g~~~~~d~-~~~~g~~~~~~~~~ai~~s~~~ivv~S~~y~~s~wcl~ 138 (1223)
++++++|||||||+|+|||++|++||+++|+++||++|+|+ ++++|+.|.++|.+||++|+++|+|||++|++|.||++
T Consensus 3 ss~~~~yDVFiSfrg~D~r~~Fv~~L~~~L~~~gi~~f~D~~~l~~G~~i~~~l~~aIe~Sri~IvV~S~ny~~S~WCl~ 82 (176)
T 3jrn_A 3 SHTATKYDVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAVVVVSENYAASSWCLD 82 (176)
T ss_dssp ----CCEEEEEEECHHHHTTTHHHHHHHHHHHTTCCEECCCC--------------CCTTEEEEEEEECTTTTTCHHHHH
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHH
T ss_conf 98898884999786746674899999999997899899876423577855799999999688899982488677716899
Q ss_pred HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 99999997612997799899650786322234642468999886515983679999999999720579888887146899
Q 000922 139 ELVKILECKNKNAQMVVPVFYHVDPSDVRKQTGSFGDAFVKHEKQFKGIPEKVQKWRVVLTEASNLSGWDSMNIRPEAKL 218 (1223)
Q Consensus 139 El~~i~~~~~~~~~~vlpvfy~v~ps~vr~~~g~~~~~~~~~~~~~~~~~~~i~~w~~al~~~a~~~g~~~~~~~~e~~~ 218 (1223)
||++|++|.+.++++|+||||+|+|++||+|+|+||++|.+|+.+ ...+++++||.||+++|+++||++. .+|+++
T Consensus 83 EL~~i~~~~~~~~~~ViPIfy~V~ps~Vr~q~g~fg~af~~~~~~--~~~~~~~~Wr~AL~~va~~~G~~~~--~~e~~~ 158 (176)
T 3jrn_A 83 ELVTIMDFEKKGSITVMPIFYGVEPNHVRWQTGVLAEQFKKHASR--EDPEKVLKWRQALTNFAQLSGDCSG--DDDSKL 158 (176)
T ss_dssp HHHHHHHHHHTTSCEEEEEECSSCHHHHHHTCTHHHHHHHHHHTT--SCHHHHHHHHHHHHHHTTSCCEECC--SCHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCHHHHHHHHHHC--CCHHHHHHHHHHHHHHHCCCCEECC--CCHHHH
T ss_conf 999877654158877999984487888353157099999999820--4789999999999997466635258--879999
Q ss_pred HHHHHHHHHHHCCCCCCC
Q ss_conf 999999998511487778
Q 000922 219 VDEIIEDILKKLKDKSFS 236 (1223)
Q Consensus 219 i~~i~~~i~~~l~~~~~~ 236 (1223)
|++||++|.++| +.+++
T Consensus 159 i~~Iv~~v~~~l-~~~~~ 175 (176)
T 3jrn_A 159 VDKIANEISNKK-TIYAT 175 (176)
T ss_dssp HHHHHHHHHTTC-C----
T ss_pred HHHHHHHHHHHH-CCCCC
T ss_conf 999999999986-67898
No 5
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A*
Probab=1.00 E-value=1 Score=305.06 Aligned_cols=297 Identities=16% Similarity=0.141 Sum_probs=219.2
Q ss_pred CCCCEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHH--HHHHCCCCCEEEEECHHHHCCCCHHHHHHHH
Q ss_conf 78721002279999996605999909999970599826799999999--8760468503432003443037979999999
Q 000922 239 FEGLVGIYSRIEQIKSLLCVGLPDFQIIGIWGMGGIGKTTIAGAIFN--QISNDFEGRCFMANVREESERGGLVYLRERL 316 (1223)
Q Consensus 239 ~~~~vGr~~~~~~l~~~L~~~~~~~~vv~I~G~gGiGKTtLA~~v~~--~~~~~F~~~~~~~~~~~~s~~~~l~~l~~~l 316 (1223)
.+..|||+.++++|.++|... ++.++|+|+||||+||||||+++|+ +++.+|+..+||.++ +.......+...+
T Consensus 127 tk~~VGRe~eLeeL~elL~~~-d~~RVV~IvGmGGIGKTTLAk~Vy~d~rV~~~Fd~gV~WVsV---s~~~d~~~IL~~L 202 (1221)
T 1vt4_I 127 AKYNVSRLQPYLKLRQALLEL-RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL---KNCNSPETVLEML 202 (1221)
T ss_dssp CCSCCCCHHHHHHHHHHHHHC-CSSCEEEECCSTTSSHHHHHHHHHHHCHHHHHHSSCEEEEEC---CCSSSHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHCC-CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE---CCCCCHHHHHHHH
T ss_conf 787789289999999997435-897189997699966799999999714988748993899982---8999999999999
Q ss_pred HHHHHHHCCC---CCCC--------CC-HHHHHHHH---HCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECCH
Q ss_conf 9998521037---6799--------93-68999998---06908999618999888999844889879997799992891
Q 000922 317 YSEILEETLK---IRTP--------SV-PKCIKERL---QQMKVFVVLDDVNKPEQLDYLAGGLDRFGLGSRVVVTSRDR 381 (1223)
Q Consensus 317 l~~~~~~~~~---~~~~--------~~-~~~l~~~L---~~kr~LiVLDdv~~~~~~~~l~~~~~~~~~gs~IIiTTR~~ 381 (1223)
+..+...... .... +. ...+++.+ .++|+||||||||+.++|+.+ ++||+||||||++
T Consensus 203 l~lL~~i~~~~~~~~d~~~~ip~~leeL~e~Lr~lL~~l~~KRvLLVLDDVwd~eqLe~f-------~pGSRILVTTRd~ 275 (1221)
T 1vt4_I 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF-------NLSCKILLTTRFK 275 (1221)
T ss_dssp HHHHHHHCSSSTTTSCCCSSHHHHHHHHHHHHHHHHHHSTTSSCEEEEESCCCHHHHHHH-------HSSCCEEEECSCS
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH-------CCCEEEEEECCCH
T ss_conf 999862272102200134679999999999999999850478879987186818999864-------7982999944373
Q ss_pred HHHHHCCCCCEEEEC------CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC--CHHH
Q ss_conf 233104988269906------89988899999883420899982499999999999289924789987541267--9899
Q 000922 382 QVFDKCRVDKIYEVE------GLNQNEALEHFSNYAFRQNICPKDFLVLSERIVFYANGNPLALKVLGSFLQRK--CKLQ 453 (1223)
Q Consensus 382 ~v~~~~~~~~~~~l~------~L~~~ea~~Lf~~~af~~~~~~~~~~~l~~~i~~~~~G~PLal~~lg~~L~~~--~~~~ 453 (1223)
.++..+.....|+++ +|+.+||++||+++. +.. ..++..++ |+|+||||+++|+.|+++ +..+
T Consensus 276 ~Va~~l~g~~vy~LeL~d~dL~LS~eEA~eLF~~~~-g~~-----~eeL~~eI---CgGLPLALkLaGs~Lr~k~~s~ee 346 (1221)
T 1vt4_I 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL-DCR-----PQDLPREV---LTTNPRRLSIIAESIRDGLATWDN 346 (1221)
T ss_dssp HHHHHHHHHSSCEEEECSSSSCCCHHHHHHHHHHHH-CCC-----TTTHHHHH---CCCCHHHHHHHHHHHHHSCSSHHH
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHC-CCC-----HHHHHHHH---HCCCHHHHHHHHHHHHCCCCCHHH
T ss_conf 799866897089946865568969999999999974-998-----89999999---698999999999998488997999
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHCCCHHH-HHHHHEEECCCCCCCH--HHHHHHHCCCC--CHHHHHHHHHHCCCEEE
Q ss_conf 9999862014998737769988572041867-8674102024489997--89999862999--77765899872566289
Q 000922 454 WENALKNLTRISDPDIYDMLKISYNELKQEE-KSIFLDIACFFKGDDK--DFMTRIQDDPE--SVHYGLNVLVDKSLVAL 528 (1223)
Q Consensus 454 w~~~l~~l~~~~~~~i~~~l~~sy~~L~~~~-k~~fl~~a~f~~~~~~--~~~~~~l~~~~--~~~~~l~~L~~~~Li~~ 528 (1223)
|... ....+..+|++||+.|++++ |.||+++|+||.++.+ +.+..+|...+ .+...++.|+++||++.
T Consensus 347 W~~~-------~~~~I~aaLelSYd~Lp~eelK~cFL~LAIFPed~~I~~elLa~LW~aeGeedAe~~L~eLvdRSLLq~ 419 (1221)
T 1vt4_I 347 WKHV-------NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK 419 (1221)
T ss_dssp HHHC-------SCHHHHHHHHHHHHHSCTTHHHHHHHHTTSSCTTSCEEHHHHHHHHCSSCSHHHHHHHHHHHTSSSSSB
T ss_pred HHCC-------CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEE
T ss_conf 8669-------861899999999984889999999999717799998779999987667788999999999996198898
Q ss_pred EC-CCEEEECHHHHHHHHHHHHHCCCCCCCCCEEECCCCC
Q ss_conf 34-9939952889999999976205689997112111354
Q 000922 529 SC-NNKLQIHDLLQEFGREIVRQQSVKEPGKRSRLWYYED 567 (1223)
Q Consensus 529 ~~-~~~~~mHdli~~~~~~i~~~~~~~~~~~~~rl~~~~~ 567 (1223)
.. .+++.|||++++++. ...+.+..+.++.+...
T Consensus 420 d~~~~rYrMHDLllELr~-----~~~e~~alHrRLvd~Y~ 454 (1221)
T 1vt4_I 420 QPKESTISIPSIYLELKV-----KLENEYALHRSIVDHYN 454 (1221)
T ss_dssp CSSSSEEBCCCHHHHHHH-----HHSCCTTHHHHHHHHHH
T ss_pred ECCCCEEEEHHHHHHHHC-----CCCCHHHHHHHHHHHHH
T ss_conf 689998986099999856-----89859999999999998
No 6
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens}
Probab=1.00 E-value=1 Score=300.82 Aligned_cols=302 Identities=22% Similarity=0.288 Sum_probs=223.9
Q ss_pred CCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH---HHCCCCCEEEEECHHHHCCCCHH
Q ss_conf 778777872100227999999660599990999997059982679999999987---60468503432003443037979
Q 000922 234 SFSSDFEGLVGIYSRIEQIKSLLCVGLPDFQIIGIWGMGGIGKTTIAGAIFNQI---SNDFEGRCFMANVREESERGGLV 310 (1223)
Q Consensus 234 ~~~~~~~~~vGr~~~~~~l~~~L~~~~~~~~vv~I~G~gGiGKTtLA~~v~~~~---~~~F~~~~~~~~~~~~s~~~~l~ 310 (1223)
..|..+..||||+.++++|.++|.....+.++|+|+||||+||||||++++++. ...|+..+||..+...... .+.
T Consensus 118 ~~P~~~~~~vGR~~~l~~L~~~L~~~~~~~~~v~I~G~~GiGKTtLa~~~~~~~~~~~~~f~~~v~wv~~~~~~~~-~~~ 196 (591)
T 1z6t_A 118 GVPQRPVVFVTRKKLVNAIQQKLSKLKGEPGWVTIHGMAGCGKSVLAAEAVRDHSLLEGCFPGGVHWVSVGKQDKS-GLL 196 (591)
T ss_dssp TCCCCCSSCCCCHHHHHHHHHHHTTSTTSCEEEEEECCTTSSHHHHHHHHHCCHHHHHHHCTTCEEEEEEESCCHH-HHH
T ss_pred CCCCCCCEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCHH-HHH
T ss_conf 9999987140529999999999860368884699976998988999999983556888528996599977877668-899
Q ss_pred HHHHHHHHHHHHHCCC-CCCCC---C-HHHHHHHHHC--CEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHH
Q ss_conf 9999999998521037-67999---3-6899999806--90899961899988899984488987999779999289123
Q 000922 311 YLRERLYSEILEETLK-IRTPS---V-PKCIKERLQQ--MKVFVVLDDVNKPEQLDYLAGGLDRFGLGSRVVVTSRDRQV 383 (1223)
Q Consensus 311 ~l~~~ll~~~~~~~~~-~~~~~---~-~~~l~~~L~~--kr~LiVLDdv~~~~~~~~l~~~~~~~~~gs~IIiTTR~~~v 383 (1223)
.-...+...+...... ..... . ...+...+.+ +++||||||||+..+++. +++|++||||||+..+
T Consensus 197 ~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~LLVLDdv~~~~~l~~-------l~~~~~ilvTsR~~~~ 269 (591)
T 1z6t_A 197 MKLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLLILDDVWDSWVLKA-------FDSQCQILLTTRDKSV 269 (591)
T ss_dssp HHHHHHHHHHCSSCCSCSSCCCSHHHHHHHHHHHHHHTCTTCEEEEEEECCHHHHHT-------TCSSCEEEEEESCGGG
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH-------HCCCCEEEEECCCCHH
T ss_conf 999999998503556556799889999999999970679986999858998799987-------6379869998988177
Q ss_pred HHHCCCCCEEEE---CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 310498826990---68998889999988342089998249999999999928992478998754126798999999862
Q 000922 384 FDKCRVDKIYEV---EGLNQNEALEHFSNYAFRQNICPKDFLVLSERIVFYANGNPLALKVLGSFLQRKCKLQWENALKN 460 (1223)
Q Consensus 384 ~~~~~~~~~~~l---~~L~~~ea~~Lf~~~af~~~~~~~~~~~l~~~i~~~~~G~PLal~~lg~~L~~~~~~~w~~~l~~ 460 (1223)
+..++ ...+++ ++|+.+|+++||...++.. .....+.+.+|+++|+|+|||++++|+.++.+. .+|...+..
T Consensus 270 ~~~~~-~~~~~v~~l~~L~~~ea~~L~~~~~~~~---~~~~~~~~~~i~~~~~G~PLal~~~a~~l~~~~-~~w~~~l~~ 344 (591)
T 1z6t_A 270 TDSVM-GPKYVVPVESSLGKEKGLEILSLFVNMK---KADLPEQAHSIIKECKGSPLVVSLIGALLRDFP-NRWEYYLKQ 344 (591)
T ss_dssp GTTCC-SCEEEEECCSSCCHHHHHHHHHHHHTSC---GGGSCTHHHHHHHHHTTCHHHHHHHHHHHHHST-TCHHHHHHH
T ss_pred HHHCC-CCCEEEECCCCCCHHHHHHHHHHHHCCC---CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC-HHHHHHHHH
T ss_conf 77348-9826861588999899999999871898---310459999999995898379999999984484-359999999
Q ss_pred HCCCC-----------CCCHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCH--HHHHHHHCCCC-CHHHHHHHHHHCCCE
Q ss_conf 01499-----------87377699885720418678674102024489997--89999862999-777658998725662
Q 000922 461 LTRIS-----------DPDIYDMLKISYNELKQEEKSIFLDIACFFKGDDK--DFMTRIQDDPE-SVHYGLNVLVDKSLV 526 (1223)
Q Consensus 461 l~~~~-----------~~~i~~~l~~sy~~L~~~~k~~fl~~a~f~~~~~~--~~~~~~l~~~~-~~~~~l~~L~~~~Li 526 (1223)
+.... ...+..++..||+.|+++.|.||+++|+||.+..+ +.+..+|.... .+...+..|++++|+
T Consensus 345 l~~~~~~~~~~~~~~~~~~l~~~l~~s~~~L~~~~~~~l~~la~f~~~~~i~~~~l~~l~~~~~~~~~~~l~~L~~~~Ll 424 (591)
T 1z6t_A 345 LQNKQFKRIRKSSSYDYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVNKSLL 424 (591)
T ss_dssp HHSCCCCCSSCCCSSCCHHHHHHHHHHHHTSCTTTHHHHHHGGGCCTTCCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCE
T ss_conf 98868987651146543789999999998689999999997455679985089999999665889999999999859586
Q ss_pred EEECCC---EEEECHHHHHHHHHHH
Q ss_conf 893499---3995288999999997
Q 000922 527 ALSCNN---KLQIHDLLQEFGREIV 548 (1223)
Q Consensus 527 ~~~~~~---~~~mHdli~~~~~~i~ 548 (1223)
....++ .+.||+++++++++..
T Consensus 425 ~~~~~~~~~~~~~H~lv~~~~~~~~ 449 (591)
T 1z6t_A 425 FCDRNGKSFRYYLHDLQVDFLTEKN 449 (591)
T ss_dssp EEEEETTEEEEECCHHHHHHHHHHT
T ss_pred EEECCCCCCEEEECHHHHHHHHHHH
T ss_conf 8854898567997689999998653
No 7
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00 E-value=1 Score=291.29 Aligned_cols=363 Identities=22% Similarity=0.241 Sum_probs=281.5
Q ss_pred HCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCC-CCCCCCCCCCEEECCCCCCC-CCCCC
Q ss_conf 42899862189953788779877531230687667999708999708999999-99999898716856898772-11233
Q 000922 601 FVKMPNLRLLKFYVPGQITGSDMCTKVHLQQGLQYLPDELRYFHWYGYPLKAL-PFDFSPENLIELNLPHSKVE-QIWEG 678 (1223)
Q Consensus 601 f~~m~~Lr~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~~Lr~L~~~~~~l~~l-p~~~~~~~L~~L~L~~~~i~-~l~~~ 678 (1223)
+.++++|+.|.+..+. ..-.... ....+|++|++.++.+... |....+.+|++|++.+|.+. .++..
T Consensus 174 ~~~l~~L~~L~Ls~n~----------l~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 242 (768)
T 3rgz_A 174 SDGCGELKHLAISGNK----------ISGDVDV-SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRA 242 (768)
T ss_dssp TTCCTTCCEEECCSSE----------EESCCBC-TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHHH
T ss_pred HCCCCCCCEEECCCCC----------CCCCCCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHH
T ss_conf 4358988989897880----------3465784-5478689898928827887711126999998979488587816577
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC----CCCCEEECCCCCCC-CCCCCCCCCCCCC
Q ss_conf 212456338815778788524864334562065143776776688888----98109980288766-4441110347545
Q 000922 679 KKHFNNLVMLCLSHCESLRCFPQNIHFRTLIEIDFSYCINLTEFPEIS----GNVIELDLKGTAIE-EIPSSIECLTKLE 753 (1223)
Q Consensus 679 ~~~l~~L~~L~Ls~~~~l~~~~~~~~~~~L~~L~Ls~c~~l~~lp~~~----~~L~~L~L~~~~l~-~lp~~i~~l~~L~ 753 (1223)
+..+++|+.|++++|......|.. .+++|+.|++++|.....+|... .+|++|++++|.+. .+|..++.+++|+
T Consensus 243 l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 321 (768)
T 3rgz_A 243 ISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 321 (768)
T ss_dssp TTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCC
T ss_pred HHCCCCCCEEECCCCCCCCCCCCC-CCCCCCEEECCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCCCCC
T ss_conf 744888898989888665716724-3687898979178557725888884468688998968967784236775587766
Q ss_pred EEEECCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCHHHHCCCC-CCEEEECCCCCCC-CCCCCCCC--CCCCCEEEC
Q ss_conf 6530222356457510-01698544886017867654323220134-4405302788764-34600004--889969981
Q 000922 754 ELDLAYCRRLKSLPSS-ICKLKSLHLLCLYNCSNFEIFPEILEKME-CLEYIDLESTAVK-ELPSSVEQ--LKGLRELIL 828 (1223)
Q Consensus 754 ~L~L~~~~~l~~lp~~-i~~L~~L~~L~L~~c~~~~~~p~~l~~l~-~L~~L~l~~n~l~-~lp~~i~~--l~~L~~L~L 828 (1223)
.|++++|...+.+|.. +..+++|++|++++|...+.+|..+..+. +|+.|++++|.+. .+|..+.. +++|+.|++
T Consensus 322 ~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L 401 (768)
T 3rgz_A 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYL 401 (768)
T ss_dssp EEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEEC
T ss_pred EEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHCCCCCCCEEEC
T ss_conf 77897885257379788724888878848478437623098986322771998627874787676665332477618989
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCC-C
Q ss_conf 579998988633379988856643775444-58841013656558983587898-78933469999999976799998-7
Q 000922 829 EDCSELSKLPENLGNLKSLKRLFAKRSAIS-KLPSSIAYLDEVIELSFHGCRGL-VLPPILSGLSSLTKLDLSDCDVM-E 905 (1223)
Q Consensus 829 ~~~~~l~~lp~~l~~l~~L~~L~l~~~~l~-~lp~~~~~l~~L~~L~l~~~~~~-~~~~~~~~l~~L~~L~L~~~~l~-~ 905 (1223)
++|...+.+|..++.+++|+.|++++|.+. .+|..+..+++|+.|++++|... .+|..+..+++|+.|++++|.+. .
T Consensus 402 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 481 (768)
T 3rgz_A 402 QNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGE 481 (768)
T ss_dssp CSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSC
T ss_pred CCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCC
T ss_conf 77846542487775689879898958846685467774499889898978815471897882877732999019951375
Q ss_pred CCHHHCCCCCCCEEECCCCCCC-CCCHHHCCCCCCCEEECCCCCCCCCCCCC---CCCCCEEECCCCCCCCCCC
Q ss_conf 7311038997858869799884-24311008999989952589888889976---6777687443786767569
Q 000922 906 IPQDIGRASSLEILDISGNDFD-SLPASIKQLSRLRELYLSNCSMLQSLPEL---PLRVKLLDASNCKQLQSLP 975 (1223)
Q Consensus 906 lp~~l~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~c~~l~~lp~l---~~~L~~L~~~~c~~L~~l~ 975 (1223)
+|..++.+++|+.|++++|.+. .+|.++..+++|+.|++++|...+.+|.. .++|+.|++++|.-...+|
T Consensus 482 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip 555 (768)
T 3rgz_A 482 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCC
T ss_pred CCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCC
T ss_conf 88788169989989753995189687688568999989897894337488777088989989898884688279
No 8
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00 E-value=1 Score=290.50 Aligned_cols=338 Identities=22% Similarity=0.221 Sum_probs=252.3
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC-CCCCCCEEECCCCC
Q ss_conf 97089997089999999999989871685689877211233212456338815778788524864-33456206514377
Q 000922 638 DELRYFHWYGYPLKALPFDFSPENLIELNLPHSKVEQIWEGKKHFNNLVMLCLSHCESLRCFPQN-IHFRTLIEIDFSYC 716 (1223)
Q Consensus 638 ~~Lr~L~~~~~~l~~lp~~~~~~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~Ls~~~~l~~~~~~-~~~~~L~~L~Ls~c 716 (1223)
.+|++|++.++.+........+.+|++|++++|.+......+..+++|++|++++|.....+|.. ..+++|+.|++++|
T Consensus 178 ~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n 257 (768)
T 3rgz_A 178 GELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSN 257 (768)
T ss_dssp TTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSS
T ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCC
T ss_conf 98898989788034657845478689898928827887711126999998979488587816577744888898989888
Q ss_pred CCCCCCCCCCC-CCCEEECCCCCCC-CCCCCCCCC-CCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHH
Q ss_conf 67766888889-8109980288766-444111034-75456530222356457510016985448860178676543232
Q 000922 717 INLTEFPEISG-NVIELDLKGTAIE-EIPSSIECL-TKLEELDLAYCRRLKSLPSSICKLKSLHLLCLYNCSNFEIFPEI 793 (1223)
Q Consensus 717 ~~l~~lp~~~~-~L~~L~L~~~~l~-~lp~~i~~l-~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~~c~~~~~~p~~ 793 (1223)
.....+|.... +|++|++++|.++ .+|..+..+ ++|+.|++++|...+.+|..+..+++|++|++++|...+.+|..
T Consensus 258 ~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~ 337 (768)
T 3rgz_A 258 QFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 337 (768)
T ss_dssp CCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHH
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHH
T ss_conf 66571672436878989791785577258888844686889989689677842367755877667789788525737978
Q ss_pred -HCCCCCCEEEECCCCCCC-CCCCCCCCCC-CCCEEECCCCCCCCCCCCCCCC--CCCCCEEECCCCCCC-CCCCCCCCC
Q ss_conf -201344405302788764-3460000488-9969981579998988633379--988856643775444-588410136
Q 000922 794 -LEKMECLEYIDLESTAVK-ELPSSVEQLK-GLRELILEDCSELSKLPENLGN--LKSLKRLFAKRSAIS-KLPSSIAYL 867 (1223)
Q Consensus 794 -l~~l~~L~~L~l~~n~l~-~lp~~i~~l~-~L~~L~L~~~~~l~~lp~~l~~--l~~L~~L~l~~~~l~-~lp~~~~~l 867 (1223)
+..+++|++|++++|.+. .+|..+..++ +|+.|++++|...+.+|..+.. +++|+.|++++|.+. .+|..+..+
T Consensus 338 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l 417 (768)
T 3rgz_A 338 TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC 417 (768)
T ss_dssp HHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGC
T ss_pred HHHCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCHHHHCC
T ss_conf 87248888788484784376230989863227719986278747876766653324776189897784654248777568
Q ss_pred CCCCEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCC-CCCHHHCCCCCCCEEECCCCCCC-CCCHHHCCCCCCCEEEC
Q ss_conf 56558983587898-78933469999999976799998-77311038997858869799884-24311008999989952
Q 000922 868 DEVIELSFHGCRGL-VLPPILSGLSSLTKLDLSDCDVM-EIPQDIGRASSLEILDISGNDFD-SLPASIKQLSRLRELYL 944 (1223)
Q Consensus 868 ~~L~~L~l~~~~~~-~~~~~~~~l~~L~~L~L~~~~l~-~lp~~l~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 944 (1223)
++|+.|++++|... ..|..+..+++|+.|++++|.+. .+|..++.+++|+.|++++|.+. .+|..+..+++|+.|++
T Consensus 418 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 497 (768)
T 3rgz_A 418 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL 497 (768)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEC
T ss_conf 98798989588466854677744998898989788154718978828777329990199513758878816998998975
Q ss_pred CCCCCCCCCCCC---CCCCCEEECCCCCCCCCCC
Q ss_conf 589888889976---6777687443786767569
Q 000922 945 SNCSMLQSLPEL---PLRVKLLDASNCKQLQSLP 975 (1223)
Q Consensus 945 ~~c~~l~~lp~l---~~~L~~L~~~~c~~L~~l~ 975 (1223)
++|...+.+|.. .++|+.|++++|.-...+|
T Consensus 498 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 531 (768)
T 3rgz_A 498 SNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECC
T ss_pred CCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCC
T ss_conf 3995189687688568999989897894337488
No 9
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=1.00 E-value=1 Score=281.47 Aligned_cols=237 Identities=17% Similarity=0.242 Sum_probs=101.8
Q ss_pred CCCEEECCCCCCC-CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC-CCEEEECCCCCCCCCHHHHCCCC--CCEEE
Q ss_conf 8109980288766-44411103475456530222356457510016985-44886017867654323220134--44053
Q 000922 728 NVIELDLKGTAIE-EIPSSIECLTKLEELDLAYCRRLKSLPSSICKLKS-LHLLCLYNCSNFEIFPEILEKME--CLEYI 803 (1223)
Q Consensus 728 ~L~~L~L~~~~l~-~lp~~i~~l~~L~~L~L~~~~~l~~lp~~i~~L~~-L~~L~L~~c~~~~~~p~~l~~l~--~L~~L 803 (1223)
+|++|++++|.+. .+| .++.+++|+.|++++|.. ..+|..+..+++ |++|++++|... .+|..+..+. +|+.|
T Consensus 331 ~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l-~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L 407 (636)
T 4eco_A 331 KLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQI-TEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAI 407 (636)
T ss_dssp TCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEE-EECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEE
T ss_pred CCCEEECCCCCCCCCHH-HHCCCCCCCEEECCCCCC-CCCCHHHHHHCCCCCEEECCCCCCC-CCCHHHHHCCCCCCCEE
T ss_conf 88989690880705166-647889889898989940-3033756510236868985298275-44665533345766889
Q ss_pred ECCCCCCC-CCCCCCC-------CCCCCCEEECCCCCCCCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCC--------
Q ss_conf 02788764-3460000-------4889969981579998988633-37998885664377544458841013--------
Q 000922 804 DLESTAVK-ELPSSVE-------QLKGLRELILEDCSELSKLPEN-LGNLKSLKRLFAKRSAISKLPSSIAY-------- 866 (1223)
Q Consensus 804 ~l~~n~l~-~lp~~i~-------~l~~L~~L~L~~~~~l~~lp~~-l~~l~~L~~L~l~~~~l~~lp~~~~~-------- 866 (1223)
++++|.+. .+|..+. .+++|+.|++++|... .+|.. +..+++|+.|++++|.+..+|.....
T Consensus 408 ~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~ 486 (636)
T 4eco_A 408 DFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKN 486 (636)
T ss_dssp ECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTT
T ss_pred ECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCCC-CCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCC
T ss_conf 774885788652442002201125898888977279668-6787887158988989897997887397884044001221
Q ss_pred CCCCCEEECCCCCCCCCCCCCC--CCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECC------CCCCC-CCCHHHCCCC
Q ss_conf 6565589835878987893346--9999999976799998773110389978588697------99884-2431100899
Q 000922 867 LDEVIELSFHGCRGLVLPPILS--GLSSLTKLDLSDCDVMEIPQDIGRASSLEILDIS------GNDFD-SLPASIKQLS 937 (1223)
Q Consensus 867 l~~L~~L~l~~~~~~~~~~~~~--~l~~L~~L~L~~~~l~~lp~~l~~l~~L~~L~Ls------~n~l~-~lp~~l~~l~ 937 (1223)
+++|+.|++++|....+|..+. .+++|+.|++++|.+..+|..+..+++|+.|+|+ +|.+. .+|..+..++
T Consensus 487 l~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 487 TYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GGGCCEEECCSSCCCBCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CCCCCEEECCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCC
T ss_conf 47733898969938816854534458876989898998877682353088878788988866566731212737785699
Q ss_pred CCCEEECCCCCCCCCCCC-CCCCCCEEECCCCC
Q ss_conf 998995258988888997-66777687443786
Q 000922 938 RLRELYLSNCSMLQSLPE-LPLRVKLLDASNCK 969 (1223)
Q Consensus 938 ~L~~L~L~~c~~l~~lp~-l~~~L~~L~~~~c~ 969 (1223)
+|+.|+|++|.. +.+|. +.++|+.|++++|+
T Consensus 567 ~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~ 598 (636)
T 4eco_A 567 SLTQLQIGSNDI-RKVNEKITPNISVLDIKDNP 598 (636)
T ss_dssp SCCEEECCSSCC-CBCCSCCCTTCCEEECCSCT
T ss_pred CCCEEECCCCCC-CCCCHHHHCCCCEEECCCCC
T ss_conf 878898989947-70597683867899876998
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=1.00 E-value=1 Score=280.70 Aligned_cols=311 Identities=15% Similarity=0.176 Sum_probs=167.6
Q ss_pred CCCCC---CCCCCCEEECCCCCC-CCCCCCCCCCCCCEEEECCCCCCCC--CCCCCC--------CCCCCEEECCCCCCC
Q ss_conf 99999---989871685689877-2112332124563388157787885--248643--------345620651437767
Q 000922 653 LPFDF---SPENLIELNLPHSKV-EQIWEGKKHFNNLVMLCLSHCESLR--CFPQNI--------HFRTLIEIDFSYCIN 718 (1223)
Q Consensus 653 lp~~~---~~~~L~~L~L~~~~i-~~l~~~~~~l~~L~~L~Ls~~~~l~--~~~~~~--------~~~~L~~L~Ls~c~~ 718 (1223)
+|..+ .+.+|+.|++++|.+ ..+|..+..+++|+.|+|++|..+. .+|..+ .+++|+.|++++|..
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CCHHHHHCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCC
T ss_conf 87444025599977898718988752738773799989998968987656646177875233015568831998228947
Q ss_pred CCCCCC--CCC---CCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC-CCEEEECCCCCCCCCHH
Q ss_conf 766888--889---810998028876644411103475456530222356457510016985-44886017867654323
Q 000922 719 LTEFPE--ISG---NVIELDLKGTAIEEIPSSIECLTKLEELDLAYCRRLKSLPSSICKLKS-LHLLCLYNCSNFEIFPE 792 (1223)
Q Consensus 719 l~~lp~--~~~---~L~~L~L~~~~l~~lp~~i~~l~~L~~L~L~~~~~l~~lp~~i~~L~~-L~~L~L~~c~~~~~~p~ 792 (1223)
. .+|. ... +|+.|+|++|.+..+| .++.+++|+.|++++|... .+|..+..+++ |+.|++++|... .+|.
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVRHLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCCBCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred C-CCCCHHHHHCCCCCCEEECCCCCCCCCH-HHCCCCCCEEEECCCCCCC-CCHHHHHHCCCCCCEEECCCCCCC-CCCH
T ss_conf 7-6187235515898898989799825621-2247985007987187125-035877525114989998499787-4764
Q ss_pred HHCCCCC--CEEEECCCCCCCCCC----CCCC--CCCCCCEEECCCCCCCCCCCCCC-CCCCCCCEEECCCCCCCCCCCC
Q ss_conf 2201344--405302788764346----0000--48899699815799989886333-7998885664377544458841
Q 000922 793 ILEKMEC--LEYIDLESTAVKELP----SSVE--QLKGLRELILEDCSELSKLPENL-GNLKSLKRLFAKRSAISKLPSS 863 (1223)
Q Consensus 793 ~l~~l~~--L~~L~l~~n~l~~lp----~~i~--~l~~L~~L~L~~~~~l~~lp~~l-~~l~~L~~L~l~~~~l~~lp~~ 863 (1223)
.+..+.. |+.|++++|.+...+ ..+. .+++|+.|++++|... .+|..+ ..+++|+.|++++|.+..+|..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~ 715 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPEN 715 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTT
T ss_pred HHHCCCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCC-CCCHHHHCCCCCCCEEECCCCCCCCCCHH
T ss_conf 45225567778897708847886432000000135797688983199688-65978871389889998989968854967
Q ss_pred CCCC--------CCCCEEECCCCCCCCCCCCCC--CCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCC------CCCC
Q ss_conf 0136--------565589835878987893346--99999999767999987731103899785886979------9884
Q 000922 864 IAYL--------DEVIELSFHGCRGLVLPPILS--GLSSLTKLDLSDCDVMEIPQDIGRASSLEILDISG------NDFD 927 (1223)
Q Consensus 864 ~~~l--------~~L~~L~l~~~~~~~~~~~~~--~l~~L~~L~L~~~~l~~lp~~l~~l~~L~~L~Ls~------n~l~ 927 (1223)
+... ++|+.|++++|....+|..+. .+++|+.|+|++|.+..+|..+..+++|+.|+|++ |.+.
T Consensus 716 ~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~ 795 (876)
T 4ecn_A 716 SLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRIL 795 (876)
T ss_dssp SSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCC
T ss_pred HHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCC
T ss_conf 84555334321487158988899786652776244279869899089978761056615999889988799776656324
Q ss_pred -CCCHHHCCCCCCCEEECCCCCCCCCCCC-CCCCCCEEECCCCC
Q ss_conf -2431100899998995258988888997-66777687443786
Q 000922 928 -SLPASIKQLSRLRELYLSNCSMLQSLPE-LPLRVKLLDASNCK 969 (1223)
Q Consensus 928 -~lp~~l~~l~~L~~L~L~~c~~l~~lp~-l~~~L~~L~~~~c~ 969 (1223)
.+|..+..+++|+.|+|++|.. +.+|. ++++|+.|++++|+
T Consensus 796 ~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~ 838 (876)
T 4ecn_A 796 RQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNP 838 (876)
T ss_dssp CCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCT
T ss_pred CCCHHHHHCCCCCCEEECCCCCC-CCCCHHHCCCCCEEECCCCC
T ss_conf 44868883699878898879978-74087662877889997998
Done!