Query 000932
Match_columns 1221
No_of_seqs 396 out of 2290
Neff 6.4
Searched_HMMs 29240
Date Tue Mar 26 17:31:02 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000932.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_699-703//hhsearch_pdb/000932hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dfs_A Myosin-5A; myosin-V, in 1.0 1 1 1920.9 0.0 912 155-1070 7-975 (1080)
2 1i84_S Smooth muscle myosin he 1.0 1 1 1850.8 0.0 775 152-929 27-841 (1184)
3 4anj_A Unconventional myosin-V 1.0 1 1 1817.5 0.0 794 156-967 2-847 (1052)
4 1kk8_A Myosin heavy chain, str 1.0 1 1 1803.8 0.0 771 150-929 25-828 (837)
5 2ycu_A Non muscle myosin 2C, a 1.0 1 1 1780.5 0.0 770 158-929 8-810 (995)
6 1w7j_A Myosin VA; motor protei 1.0 1 1 1776.4 0.0 752 156-909 8-794 (795)
7 1g8x_A Myosin II heavy chain f 1.0 1 1 1755.5 0.0 722 158-892 32-772 (1010)
8 4db1_A Myosin-7; S1DC, cardiac 1.0 1 1 1737.6 0.0 729 148-883 26-781 (783)
9 2v26_A Myosin VI; calmodulin-b 1.0 1 1 1721.9 0.0 731 160-897 2-784 (784)
10 1w9i_A Myosin II heavy chain; 1.0 1 1 1712.2 0.0 717 157-887 31-766 (770)
No 1
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=1.00 E-value=1 Score=1920.90 Aligned_cols=912 Identities=39% Similarity=0.637 Sum_probs=789.3
Q 000932 155 IKKKLRVWCRLEDGKWESGMIQST---SGDEAFVLLSNGNVVKVST----GELLP-ANPDILEGVDDLIQLSYLNEPSVL 226 (1221)
Q Consensus 155 ~~~~~~vW~~~~~~~~~~~~i~~~---~~~~~~v~~~~g~~~~v~~----~~~~~-~np~~~~~~~Dl~~L~~LnE~svL 226 (1221)
..+|.+||+|+|+++|..|+|++. +++.++|.+++|++.+|+. +++.| +||+.+++++||+.|++|||++||
T Consensus 7 ~~~g~~vwv~~~~~~~~~~~v~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~np~~~~~~~Dl~~L~~l~e~~vl 86 (1080)
T 2dfs_A 7 YTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDILVGENDLTALSYLHEPAVL 86 (1080)
T ss_dssp CCTTCEEEEEETTTEEEEEECSSCCCTTCSEEECCCSSSSCCEEECCTTTCCCCCBCCCGGGSSCSBSTTCSSCSHHHHH
T ss_pred CCCCCEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHH
T ss_conf 01698899988988368999986203899469999889988999667764446644586400242356665413367899
Q 000932 227 NNIQYRY-SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESG 303 (1221)
Q Consensus 227 ~~L~~Ry-~~~~iYT~~G~iLIaVNP~k~l~lY~~~~~~~Y~~~~~~--~PHiyaiA~~Ay~~m~~~~~nQsIiisGESG 303 (1221)
|||+.|| ..+.||||+|++|||||||+++|+|+++++..|+++... ||||||||+.||++|..+++|||||||||||
T Consensus 87 ~nL~~Ry~~~~~iYTy~G~iLiavNPyk~l~iy~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~~m~~~~~~QsIiisGESG 166 (1080)
T 2dfs_A 87 HNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESG 166 (1080)
T ss_dssp HHHHHHHHTTCCCEEEETTEEEEECCSSCCSCSSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTT
T ss_pred HHHHHHHHHCCCCHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 99999998557731025742688369754466998999986288778899829788999999987359993899738878
Q 000932 304 AGKTETAKFAMQYLAALGGGS--EGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEK 381 (1221)
Q Consensus 304 AGKTet~K~il~yLa~~~~~~--~~ie~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEk 381 (1221)
|||||++|++|+||++++++. ..++++|+++||||||||||||++|||||||||||+|+||.+|.|+||+|.+|||||
T Consensus 167 AGKTe~~K~i~~yla~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i~~yLLEK 246 (1080)
T 2dfs_A 167 AGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEK 246 (1080)
T ss_dssp SSHHHHHHHHHHHHHHTTTCCTTTCTHHHHHHHHHHHHHHHEEEETTEEEEECSEEEEEEEECTTCCEEEEEEEEECCCC
T ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCEEEEECC
T ss_conf 87520699999999862667776305788988999999742874899997241045689999799977650340686057
Q 000932 382 SRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTF 461 (1221)
Q Consensus 382 sRVv~~~~gERnfHIFYqLl~G~~~~~r~~l~L~~~~~y~yL~~~~~~~~~~~dD~~~f~~l~~Al~~lG~s~~e~~~if 461 (1221)
||||.|++||||||||||||+|+++++++.|+|.++.+|+||++++|..++++||+++|..++.||++|||+++++..||
T Consensus 247 sRVv~q~~~ERnfHIFYqllag~~~~~~~~l~L~~~~~y~yl~~~~~~~~~~~dD~~~f~~~~~A~~~lg~~~~e~~~i~ 326 (1080)
T 2dfs_A 247 SRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIF 326 (1080)
T ss_dssp GGGTCCCTTCCSBHHHHHHHHTTTSSGGGGTCCCCTTTCTTTSTTSCCSCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CEEECCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 60224479987423588987499967898756999776675268997777885489999999999998699999999999
Q 000932 462 AMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKF 541 (1221)
Q Consensus 462 ~iLaAILhLGNi~F~~~~~~~~~~~~~~~~l~~aA~LLgv~~~~L~~~Lt~r~~~~~~e~i~~~l~~~qA~~~RDaLak~ 541 (1221)
+|||||||||||+|...+++......+.+.++.||.||||++++|.++||++++.+++|.++++++++||.++||||||+
T Consensus 327 ~ilaaILhLGni~F~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~e~i~~~~~~~qa~~~rdalak~ 406 (1080)
T 2dfs_A 327 RILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKH 406 (1080)
T ss_dssp HHHHHHHHHTTCCCEEETTTEEECCSSCHHHHHHHHHHTCCHHHHHHHHHEEEECC----EEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHH
T ss_conf 99999995267348735886604238859999999996989999999743668995894188589889999999999999
Q 000932 542 IYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWT 621 (1221)
Q Consensus 542 LY~~LF~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNErLQ~~f~~~iF~~eqeeY~~EgI~~~ 621 (1221)
||++||+|||.+||.+|.... ....+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||.+|||+|+
T Consensus 407 lY~~LF~wlV~~iN~~l~~~~-~~~~~IgvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~ 485 (1080)
T 2dfs_A 407 IYANLFNWIVDHVNKALHSTV-KQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWT 485 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHCCSS-CCCEEEEEEEECCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHHHHHCCCC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999899999999998623653-4572577632677666675779999987556899999998763889987753598631
Q 000932 622 RVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHL-GSNSCFKGER--GRAFSIRHYAGEVPYDTNGF 698 (1221)
Q Consensus 622 ~i~f~dn~~~ldLie~kp~Gll~lLDeE~~~p~~td~tfl~kl~~~~-~~~~~f~~~~--~~~F~I~HyaG~V~Y~~~gf 698 (1221)
.|+|.||++|||||+++ .|||+||||||++|++||.+|++||+++| ++|++|..++ ...|+|+||||+|.|+++||
T Consensus 486 ~i~f~dn~~~idlie~~-~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gf 564 (1080)
T 2dfs_A 486 LIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGF 564 (1080)
T ss_dssp CCCCCCCHHHHHHHHST-TSHHHHHHHHTTSTTCCHHHHHHHHHHHHBTTBSSEECCTTCSSEEEEECSSCEEEEECTTH
T ss_pred CCCCCCCHHHHHHHHCC-CCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEEHHHH
T ss_conf 03665658899988367-86132243101599987289999999985157988547888899548771625799702558
Q 000932 699 LEKNRDPLQTDIIQLLSSC-TCQV-LQLFASKMLKPS---P---------K----PAASSQPGALDTQKQSVGTKFKGQL 760 (1221)
Q Consensus 699 leKNrD~l~~d~~~ll~~S-~~~l-~~lF~~~~~~~~---~---------~----~~~~~~~~~~~~~~~tV~~~Fk~qL 760 (1221)
|+||+|++++|++.+|.+| ++++ ..+|.......+ . + +..+...++...+.+||+++|+.||
T Consensus 565 leKN~D~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~sL 644 (1080)
T 2dfs_A 565 LEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSL 644 (1080)
T ss_dssp HHHHBCCCCHHHHHHHHTCSSCSHHHHSCC-------------------------------------CCCBHHHHHHHHH
T ss_pred HHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 87434645599999987124327999984554323355544434556433234465445666554677885899999999
Q 000932 761 FKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDP 840 (1221)
Q Consensus 761 ~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~~~d~ 840 (1221)
+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+++|||+|++|.+|+.||++|+|......|+
T Consensus 645 ~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~~~d~ 724 (1080)
T 2dfs_A 645 HLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDR 724 (1080)
T ss_dssp HHHHHHHHSSEEEEEEEECCCSSCCTTCCCHHHHHHHHHTTTHHHHHHHHTTSCCEEEEHHHHHHHHTTTSCGGGCCSSH
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 99999997069866887568887881006778628798526617777587538785114889999999977766777774
Q 000932 841 LSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQKCFRGYQARSRFRELCNGVITLQSFARGE 919 (1221)
Q Consensus 841 ~~~~~~iL~~l~l~~~~~qiGkTKVFLr~g~la~LE~~R~~~l~-aai~IQk~~Rg~laRk~y~~lr~aai~IQs~~Rg~ 919 (1221)
+..|+.||..++++++.|++|+|||||+.+.++.||..|...+. +++.||++||||++|++|++++.+++.||++|||+
T Consensus 725 k~~~~~il~~~~~~~~~~~~G~TKVF~r~g~l~~LE~~R~~~l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~ 804 (1080)
T 2dfs_A 725 KQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGH 804 (1080)
T ss_dssp HHHHHHHHTTTSCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999983688145143033000022025677777888888777788888778899998501277899999999998
Q 000932 920 NTRRRHASLGKS-CSAVVPEIR---------DEQLREIICLQSAIRGWLVRKQLK-MHKLKQSNPVNAKVKRRSGRKSSD 988 (1221)
Q Consensus 920 ~aRr~y~~lr~~-AA~~IQ~~~---------~~~~~aai~IQs~~R~~laRr~~~-~~~~~a~~~~~~~~r~~~~k~~~~ 988 (1221)
.+|+.+..+++. ||++||+.| ...+.+++.||+.|||+++|+.+. ++...+....+..+|....++.-
T Consensus 805 ~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~R~~y- 883 (1080)
T 2dfs_A 805 QARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHY- 883 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHT-
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 8762022122004677787887549999999999888899999998899999999999877888999999999999998-
Q 000932 989 MKDVPQEQ---VQALPTALAELQRRVLKA--------EATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQM 1057 (1221)
Q Consensus 989 ~~~~~e~e---l~~~~~~leeLq~r~~e~--------e~~l~e~eeE~~~L~~el~~~e~~~~e~E~kl~~~eee~~k~~ 1057 (1221)
....... ...++..++..+.+..+. .+...+++.++..|+.+++..++++.++.++++.+++.+..++
T Consensus 884 -~~~~~aai~iQs~~R~~laRr~~~~Lk~ear~~~~l~~~~~~LE~kl~eLq~rL~~~e~~n~~L~~~~~~~~~~~~~e~ 962 (1080)
T 2dfs_A 884 -HRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTET 962 (1080)
T ss_dssp -TTTHHHHHHHHHHHHHHHHHHHTTTC-----------------------------------------CHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -8877669999999999999999999999998767789998889999999999999999999999999987567899999
Q 000932 1058 ASLQMSLAAARKS 1070 (1221)
Q Consensus 1058 e~Lq~~La~ak~s 1070 (1221)
+.|+..+++++..
T Consensus 963 ~~L~~~l~~le~~ 975 (1080)
T 2dfs_A 963 EKLRSDVERLRMS 975 (1080)
T ss_dssp HHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 2
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=1850.80 Aligned_cols=775 Identities=39% Similarity=0.653 Sum_probs=715.0
Q 000932 152 GYFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLL-SNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQ 230 (1221)
Q Consensus 152 ~~~~~~~~~vW~~~~~~~~~~~~i~~~~~~~~~v~~-~~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~LnE~svL~~L~ 230 (1221)
+|.. +.+||||+++++|..|+|++..++.++|.+ .+|++++|+.+++.|+||+.+++++||+.|++|||++|||||+
T Consensus 27 ~~~~--~~~vw~~~~~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~~~n~~~~~~~~Dl~~l~~l~e~~vl~~L~ 104 (1184)
T 1i84_S 27 DWSA--KKLVWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLR 104 (1184)
T ss_dssp HTTC--TTEEEECCTTTSSEEEEEEEEETTEEEEEETTTCCEEEEETTSCEECCCGGGTTCSBTTSSSCCCTTHHHHHHH
T ss_pred CCCC--CCEEEEECCCCCEEEEEEEEECCCEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
T ss_conf 7446--98699998878768899997649867888768995799658876577971014521044303353788999999
Q 000932 231 YRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTE 308 (1221)
Q Consensus 231 ~Ry~~~~iYT~~G~iLIaVNP~k~l~lY~~~~~~~Y~~~~~~--~PHiyaiA~~Ay~~m~~~~~nQsIiisGESGAGKTe 308 (1221)
.||..+.||||+|++|||||||+++|+|+++++..|+++... ||||||||+.||++|+.+++||||||||||||||||
T Consensus 105 ~Ry~~~~iyT~~g~~li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHi~aia~~ay~~m~~~~~~Q~i~isGeSGaGKTe 184 (1184)
T 1i84_S 105 ERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTE 184 (1184)
T ss_dssp HHHHHTCCEEEETTEEEEECCCSCCSCCSHHHHHHHSSCCSSSSCCCHHHHHHHHHHHHHHHTCCEEEECCCSTTSSTTH
T ss_pred HHHCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCH
T ss_conf 99647984770375015517986778998899998518654568963756678999987735899679972688887418
Q 000932 309 TAKFAMQYLAALGGG----------------SEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGA 372 (1221)
Q Consensus 309 t~K~il~yLa~~~~~----------------~~~ie~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga 372 (1221)
++|++|+||++++++ ...|+++|+++||||||||||||++|||||||||||+|+|+.+|.|+||
T Consensus 185 ~~k~~~~yla~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~npileaFGnAkT~rN~NSSRfgk~~~i~f~~~g~i~ga 264 (1184)
T 1i84_S 185 NTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGA 264 (1184)
T ss_dssp HHHHHHHHHHHHSSCCSCC------CTTCCCCCSHHHHHHHHHHHHTTTTEEEETTEEEEECSCEEEEEEECSSSCEEEE
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEE
T ss_conf 89999999888706787666665333432210249999999999999705876789963123613589998799987004
Q 000932 373 KIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLI 452 (1221)
Q Consensus 373 ~i~~yLLEksRVv~~~~gERnfHIFYqLl~G~~~~~r~~l~L~~~~~y~yL~~~~~~~~~~~dD~~~f~~l~~Al~~lG~ 452 (1221)
+|.+|||||||||.|++||||||||||||+|+++++++.|+|.++.+|+||+++ |..++++||+++|..++.||++|||
T Consensus 265 ~i~~ylLEksRv~~q~~~ErnfhiFYqll~g~~~~~~~~l~l~~~~~~~yl~~~-~~~~~~~~d~~~f~~~~~a~~~lg~ 343 (1184)
T 1i84_S 265 NIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNG-HVPIPAQQDDEMFQETLEAMTIMGF 343 (1184)
T ss_dssp EEEECCCCCGGGSCCCTTCCCCTHHHHHHHHCCHHHHHHTTCCCTTSCSSCTTS-SCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHCEE
T ss_conf 776730577545523699885045999981989999987079996757816889-9678898769999999999882125
Q 000932 453 RKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAI 532 (1221)
Q Consensus 453 s~~e~~~if~iLaAILhLGNi~F~~~~~~~~~~~~~~~~l~~aA~LLgv~~~~L~~~Lt~r~~~~~~e~i~~~l~~~qA~ 532 (1221)
+++++..||+|||||||||||+|...++++.+.+.+.+.++.||.||||++++|.++||++++.+|+|.++++++++||.
T Consensus 344 ~~~e~~~i~~ilaaiLhlGni~f~~~~~~~~~~~~~~~~~~~~a~lLg~~~~~l~~~l~~~~~~~~~e~~~~~~~~~~a~ 423 (1184)
T 1i84_S 344 TEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQAD 423 (1184)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCCCBCCTTTSCCBCCCSHHHHHHHHHTTSCHHHHHHHHHSCCCCCTTSCCCCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCEEECCCCHHHHH
T ss_conf 89999999999999994157515415887675168859999999997989999999755847883880485089999999
Q 000932 533 DSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEE 612 (1221)
Q Consensus 533 ~~RDaLak~LY~~LF~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNErLQ~~f~~~iF~~eqee 612 (1221)
++||||||+||++||+|||.+||.+|+........+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+|
T Consensus 424 ~~rdalak~lY~~lF~wlv~~iN~~l~~~~~~~~~~IgvLDi~GFE~f~~NsfeQlciNy~nEkLq~~f~~~~f~~eq~e 503 (1184)
T 1i84_S 424 FAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEE 503 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCC------CEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998863788667753588862478677774439999889988999999987654999999
Q 000932 613 YELDGVDWTRVEFE-DNEECLNLIEKK--PLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGER----GRAFSIR 685 (1221)
Q Consensus 613 Y~~EgI~~~~i~f~-dn~~~ldLie~k--p~Gll~lLDeE~~~p~~td~tfl~kl~~~~~~~~~f~~~~----~~~F~I~ 685 (1221)
|..|||+|+.|+|. ||++|||||+++ |.|||+||||||++|++||.+|++||+++|++||+|..++ ...|+|+
T Consensus 504 y~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~lLdee~~~p~~td~~~~~kl~~~~~~~~~~~~~~~~~~~~~F~i~ 583 (1184)
T 1i84_S 504 YQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCIL 583 (1184)
T ss_dssp HHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHHHHHHTTSCTTCCHHHHHHHHHHHTSSCTTEEECSSCTTTCEEEEE
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
T ss_conf 99649975013657782899999837899997212204651899997699999999973789781579878899927998
Q 000932 686 HYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPS-PKP------AASSQPGALDTQKQSVGTKFK 757 (1221)
Q Consensus 686 HyaG~V~Y~~~gfleKNrD~l~~d~~~ll~~S~~~l-~~lF~~~~~~~~-~~~------~~~~~~~~~~~~~~tV~~~Fk 757 (1221)
||||+|.|+++|||+||+|+++++++.||.+|++++ ..||.......+ .++ ..|..+........||+++|+
T Consensus 584 Hyag~V~Y~~~gfl~kN~d~l~~~~~~ll~~s~~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~ 663 (1184)
T 1i84_S 584 HYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYK 663 (1184)
T ss_dssp CSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSCHHHHHHHSCCTTCCCC---------------------CCCHHHHHH
T ss_pred CCCCEEEECCCCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 89746986268813422573219999999958539999985020233433223455555667655666887772799999
Q 000932 758 GQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQL- 836 (1221)
Q Consensus 758 ~qL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~- 836 (1221)
.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|+.||++|.|...+
T Consensus 664 ~~l~~L~~~l~~t~phfvRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~~~~F~~ry~~L~~~~~~~ 743 (1184)
T 1i84_S 664 EQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPK 743 (1184)
T ss_dssp HHHHHHHHHHTTSEEEECCEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHTTTTCTTTSCS
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 99999999998369886156577886789866678879998506864777768635864356999999999746364776
Q 000932 837 -SQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQKCFRGYQARSRFRELC---NGVIT 911 (1221)
Q Consensus 837 -~~d~~~~~~~iL~~l~l~~~~~qiGkTKVFLr~g~la~LE~~R~~~l~-aai~IQk~~Rg~laRk~y~~lr---~aai~ 911 (1221)
..|.+..|..||..++++++.|++|+|||||+.|.+..||..|...+. .++.||++||||++|++|.+++ .++++
T Consensus 744 ~~~d~k~~~~~lL~~l~l~~~~~~iG~TKVF~r~g~l~~LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~ 823 (1184)
T 1i84_S 744 GFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFC 823 (1184)
T ss_dssp SCCCHHHHHHHHHHTTTCCTTTCCBCSSEEEECTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCCCCEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77788999999999759991204676758998001899999999999999999999999999999999999999999999
Q 000932 912 LQSFARGENTRRRHASLG 929 (1221)
Q Consensus 912 IQs~~Rg~~aRr~y~~lr 929 (1221)
||+.||++.+|+.|..++
T Consensus 824 iQ~~~r~~~~~k~~~~~r 841 (1184)
T 1i84_S 824 IQYNVRSFMNVXHWPWMX 841 (1184)
T ss_dssp HHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999874108999
No 3
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=1.00 E-value=1 Score=1817.54 Aligned_cols=794 Identities=35% Similarity=0.579 Sum_probs=727.1
Q 000932 156 KKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLS--NGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRY 233 (1221)
Q Consensus 156 ~~~~~vW~~~~~~~~~~~~i~~~~~~~~~v~~~--~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~LnE~svL~~L~~Ry 233 (1221)
.+|.+||+||++++|.+|+|++..+++++|.+. +|++++++.+++.|+||+.++++|||+.|++||||+|||||+.||
T Consensus 2 e~G~~VWv~d~~~~~~~a~v~~~~~~~~~v~~~~~~g~~~~~~~~~v~~~n~~~~~~veDl~~L~~LnE~svL~nL~~Ry 81 (1052)
T 4anj_A 2 EDGKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLMYLNEATLLHNIKVRY 81 (1052)
T ss_dssp --CCCEEEEETTTEEEEEEEEEECSSEEEEEEC----CCEEEEGGGCEECCSCSSCCCSBGGGSSSCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98998999868788899999997499089999579983899548985779997568973002699998899999999998
Q 000932 234 SRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETA 310 (1221)
Q Consensus 234 ~~~~iYT~~G~iLIaVNP~k~l~-lY~~~~~~~Y~~~~~~--~PHiyaiA~~Ay~~m~~~~~nQsIiisGESGAGKTet~ 310 (1221)
.+++||||+|++|||||||+++| +|+++++..|+++... ||||||||+.||+.|..+++||||||||||||||||++
T Consensus 82 ~~~~IYTy~G~iLIaVNPyk~lp~iY~~~~~~~Y~g~~~~~lpPHIfaiA~~AY~~M~~~~~nQsIiiSGESGAGKTest 161 (1052)
T 4anj_A 82 SKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENT 161 (1052)
T ss_dssp HTTCCEEEETTEEEEECCSSCCTTTTSHHHHHHHTTCCBTTBCSCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred CCCCCEEEECCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
T ss_conf 68996796888899989898742217989999866897788998389999999999998489953999668999879999
Q 000932 311 KFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAG 390 (1221)
Q Consensus 311 K~il~yLa~~~~~~~~ie~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv~~~~g 390 (1221)
|++|+||++++++...++++|+++||||||||||||++|||||||||||+|+||..|.|+||+|.+|||||||||.|++|
T Consensus 162 K~im~yLa~~~~~~~~ie~~Il~snpiLEAFGNAKT~rNdNSSRFGK~iel~F~~~G~i~Ga~I~~YLLEKSRVv~q~~g 241 (1052)
T 4anj_A 162 KFVLRYLTESYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 241 (1052)
T ss_dssp HHHHHHHHHHHCC---CTTHHHHTHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEEEEECCCSGGGTCCCTT
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEECCCC
T ss_conf 99999999763798619999998889999616878899998687216899998899978878985021224743301898
Q 000932 391 ERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQS--------------------------ECLTIDGVDDAQNFHNLM 444 (1221)
Q Consensus 391 ERnfHIFYqLl~G~~~~~r~~l~L~~~~~y~yL~~~--------------------------~~~~~~~~dD~~~f~~l~ 444 (1221)
|||||||||||+|+++++++.|+|.++++|+||+++ +|..++++||+++|..++
T Consensus 242 ERNfHIFYqLlaGa~~~~r~~l~L~~~~~y~yL~qg~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~dD~~~f~~~~ 321 (1052)
T 4anj_A 242 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMC 321 (1052)
T ss_dssp CCSBHHHHHHHHHCCHHHHHHHTCCCGGGCHHHHTSCCCCBCCHHHHTTSCGGGCCHHHHHHCCBCCSSCCHHHHHHHHH
T ss_pred CCCCCCHHHHHCCCCHHHHHHCCCCCHHHCCHHCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 87750198886599999999839999576731138875545554200111013344022047775678865499999999
Q 000932 445 EALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNEN---HVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQ----- 516 (1221)
Q Consensus 445 ~Al~~lG~s~~e~~~if~iLaAILhLGNi~F~~~~~~~---~~~~~~~~~l~~aA~LLgv~~~~L~~~Lt~r~~~----- 516 (1221)
.||++|||+++++..||+|||||||||||+|...++.+ .+.+.+.+.++.||.||||++++|..+||++++.
T Consensus 322 ~Am~~lGfs~~e~~~I~~iLAaILhLGNi~F~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aLt~r~~~~~~~~ 401 (1052)
T 4anj_A 322 TAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGG 401 (1052)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHHHTCCEEC-------CEECGGGHHHHHHHHHHTTCCHHHHHHHHHEEC-------
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCEEEECCCC
T ss_conf 99987499999999999999999961652677547778875235688589999999839999999998753534311335
Q 000932 517 AGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANER 596 (1221)
Q Consensus 517 ~~~e~i~~~l~~~qA~~~RDaLak~LY~~LF~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNEr 596 (1221)
+++|.++++++++||.++||||||+||++||+|||.+||.+|... ....+||||||||||+|+.|||||||||||||+
T Consensus 402 ~~~e~i~~~l~~~qA~~~rDaLAK~LY~rLF~wiV~~IN~~l~~~--~~~~~IGILDI~GFE~f~~NsFEQLCINyaNEk 479 (1052)
T 4anj_A 402 AKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFE--TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEK 479 (1052)
T ss_dssp ------CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCS--CCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 685289966999999999999999999999999987653156655--665257997147875435473999999887899
Q 000932 597 LQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKG 676 (1221)
Q Consensus 597 LQ~~f~~~iF~~eqeeY~~EgI~~~~i~f~dn~~~ldLie~kp~Gll~lLDeE~~~p~~td~tfl~kl~~~~~~~~~f~~ 676 (1221)
|||+||+|+|+.||+||.+|||+|+.|+|.||++|||||+++|.|||+||||||++|++||.+|++||.++|++|++|..
T Consensus 480 LQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~lLDEe~~~p~~tD~~f~~kl~~~~~~~~~~~~ 559 (1052)
T 4anj_A 480 LQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSI 559 (1052)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSCCHHHHHHHHHHTTTTCTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999986018899999854877665776893899999872763279998887568988578999999987166745467
Q 000932 677 ER------------GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSPKPAASSQPG 743 (1221)
Q Consensus 677 ~~------------~~~F~I~HyaG~V~Y~~~gfleKNrD~l~~d~~~ll~~S~~~l-~~lF~~~~~~~~~~~~~~~~~~ 743 (1221)
++ ...|+|+||||+|+|+++|||+||+|+|+++++.||.+|++++ ..||.+........ +..
T Consensus 560 ~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~ll~~S~~~~i~~Lf~~~~~~~~~~-----~~~ 634 (1052)
T 4anj_A 560 PRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDT-----KQK 634 (1052)
T ss_dssp GGGCSCSTTTTCCTTSEEEEEETTEEEEEECTTHHHHHBCCCCHHHHHHHHTCSCHHHHHTTCC----------------
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCC-----CCC
T ss_conf 764555545566788971787678528896477265364301399999999587687898612002356555-----678
Q 000932 744 ALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEF 823 (1221)
Q Consensus 744 ~~~~~~~tV~~~Fk~qL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gyp~R~~~~eF 823 (1221)
+......||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|
T Consensus 635 ~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvLE~irI~r~Gyp~R~~f~eF 714 (1052)
T 4anj_A 635 AGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHEL 714 (1052)
T ss_dssp -----CCBHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHHHHHHTHHHHHHHTTTCCCEEEEHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 88998766899999999999999708689799987888657887678899999998745799999985579870719999
Q 000932 824 AGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFR 903 (1221)
Q Consensus 824 ~~RY~~L~~~~~~~~d~~~~~~~iL~~l~l~~~~~qiGkTKVFLr~g~la~LE~~R~~~l~aai~IQk~~Rg~laRk~y~ 903 (1221)
+.||++|+|......|++..|+.||+.+++++.+|++|+||||||+++++.||.+|...+..++.+|..+|||++|++|+
T Consensus 715 ~~RY~~L~~~~~~~~d~k~~~~~iL~~l~l~~~~y~iG~TKVFlr~~~~~~LE~~r~~~~~~~~~~iq~~r~~l~r~~~~ 794 (1052)
T 4anj_A 715 YNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWLICSRWK 794 (1052)
T ss_dssp HHHHHTTSCSSGGGSCHHHHHHHHHHHTSCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999868552468999999999999769495669955977965718999999999988999999999999999999999
Q 000932 904 ELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHK 967 (1221)
Q Consensus 904 ~lr~aai~IQs~~Rg~~aRr~y~~lr~~AA~~IQ~~~~~~~~aai~IQs~~R~~laRr~~~~~~ 967 (1221)
+++.+++.+|.++|+...|+.+... |.+.-.++.-+++.||++..||+|....
T Consensus 795 k~~~~a~~i~~~~r~~~~r~~~~~~-----------w~~l~~~v~pll~~~~~~~~~r~~~~~~ 847 (1052)
T 4anj_A 795 KVQWCSLSVIKLKNKIKYRAEAVSK-----------GEELFTGVVPILVELDGDVNGHKFSVSG 847 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHTTSSCEEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999999999999974259-----------9999975330089888998731341037
No 4
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=1.00 E-value=1 Score=1803.75 Aligned_cols=771 Identities=39% Similarity=0.676 Sum_probs=710.0
Q 000932 150 NLGYFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLS-NGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNN 228 (1221)
Q Consensus 150 ~~~~~~~~~~~vW~~~~~~~~~~~~i~~~~~~~~~v~~~-~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~LnE~svL~~ 228 (1221)
+.+|.. +.+||+|+++++|..|+|++..++.++|.+. +|++++|+.+++.++||+.+++++||+.|++|||++||||
T Consensus 25 ~~~~~~--~~~vWv~~~~~~~~~~~v~~~~~~~~~v~~~~~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~l~E~svL~n 102 (837)
T 1kk8_A 25 TAAFDG--KKNCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEKLEDMANMTYLNEASVLYN 102 (837)
T ss_dssp CCCCCT--TTEEEEEETTTEEEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECCCGGGTTCSBGGGSSCCSHHHHHHH
T ss_pred HCCCCC--CCEEEEECCCCCEEEEEEEEECCCEEEEEECCCCCEEEEEHHHCCCCCCHHHCCHHHHHHHHCCCHHHHHHH
T ss_conf 035356--987998878777567899850498699998589944785289844569412123456666532568999999
Q 000932 229 IQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGK 306 (1221)
Q Consensus 229 L~~Ry~~~~iYT~~G~iLIaVNP~k~l~lY~~~~~~~Y~~~~~~--~PHiyaiA~~Ay~~m~~~~~nQsIiisGESGAGK 306 (1221)
|+.||.+++||||+|++|||||||+++|+|+++++..|+++... ||||||||+.||++|+.+++||||||||||||||
T Consensus 103 L~~Ry~~~~IYTy~G~iLiavNPyk~l~iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay~~m~~~~~nQsIiiSGESGAGK 182 (837)
T 1kk8_A 103 LRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGK 182 (837)
T ss_dssp HHHHHHTTCCEEEETTEEEEECCSSCCSTTSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTSEEEEEEECSTTSSH
T ss_pred HHHHHHCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 99998417733411651378679867788998999985388767789739998779999987417990799957888872
Q 000932 307 TETAKFAMQYLAALGGGS------------EGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKI 374 (1221)
Q Consensus 307 Tet~K~il~yLa~~~~~~------------~~ie~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i 374 (1221)
||++|++|+||++++++. ..++++|+++||||||||||||+||||||||||||+|+|+.+|.|+||+|
T Consensus 183 Te~tK~i~~yla~~~~~~~~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I 262 (837)
T 1kk8_A 183 TENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADI 262 (837)
T ss_dssp HHHHHHHHHHHHHHSCCCCCC--------CCCHHHHHHHHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSSEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEE
T ss_conf 23489999998874346776543444444465799999999999984594678999878742699999889998834588
Q 000932 375 QTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNL-KVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIR 453 (1221)
Q Consensus 375 ~~yLLEksRVv~~~~gERnfHIFYqLl~G~~~~~r~~l~L-~~~~~y~yL~~~~~~~~~~~dD~~~f~~l~~Al~~lG~s 453 (1221)
.+|||||||||.|++||||||||||||+|+++++++.|+| .++.+|+||+++. ..++++||+++|..++.||++|||+
T Consensus 263 ~~YLLEKSRVv~q~~gERNfHIFYqLlaG~~~~~~~~l~L~~~~~~y~yL~~g~-~~~~~~dD~~~f~~~~~Am~~lGfs 341 (837)
T 1kk8_A 263 ETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGC-LTVDNIDDVEEFKLCDEAFDILGFT 341 (837)
T ss_dssp EEECCCGGGGTCCCTTCCSBHHHHHHTSCSSGGGHHHHTCCSCGGGCTTTCSSC-SCBTTBCHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCEEEEECCCCCCEEEHHHHHCCCCHHHHHHHCCCCCHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 899636862553247877521068977399989999717789956550013887-4558867699999999999856819
Q 000932 454 KEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAID 533 (1221)
Q Consensus 454 ~~e~~~if~iLaAILhLGNi~F~~~~~~~~~~~~~~~~l~~aA~LLgv~~~~L~~~Lt~r~~~~~~e~i~~~l~~~qA~~ 533 (1221)
++++..||+|||||||||||+|...++++.+++.+.+.++.||.||||++++|.++||++++.+++|.++++++++||.+
T Consensus 342 ~~e~~~i~~ilAaILhLGNi~F~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~ 421 (837)
T 1kk8_A 342 KEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVN 421 (837)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEC----CCCEESCSHHHHHHHHHHTSCHHHHHHHHHSCEEC----CEECCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCEEEECCCHHHHHH
T ss_conf 99999999999999852563587338877531388799999999979899999997337488728706972899999999
Q 000932 534 SRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEY 613 (1221)
Q Consensus 534 ~RDaLak~LY~~LF~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNErLQ~~f~~~iF~~eqeeY 613 (1221)
+||||||+||++||+|||.+||.+|... .....+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||
T Consensus 422 ~rdalaK~lY~rLF~wlV~~IN~~l~~~-~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY 500 (837)
T 1kk8_A 422 SVGALAKSLYDRMFNWLVRRVNKTLDTK-AKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999860588-878626898735775656644189999887568999998775208889876
Q 000932 614 ELDGVDWTRVEF-EDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCFKGER--------GRAFS 683 (1221)
Q Consensus 614 ~~EgI~~~~i~f-~dn~~~ldLie~kp~Gll~lLDeE~~~p~~td~tfl~kl-~~~~~~~~~f~~~~--------~~~F~ 683 (1221)
.+|||+|+.|+| .||++|||||++ |.|||+||||||++|++||.+|++|| .+++++|++|..++ ...|+
T Consensus 501 ~~EgI~w~~i~f~~dn~~~idLiek-p~GIlslLDEec~~p~~tD~tf~~kl~~~~~~~~~~f~~p~~~~~k~~~~~~F~ 579 (837)
T 1kk8_A 501 KKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFE 579 (837)
T ss_dssp HHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHHHHHHTTCTTCCHHHHHHHHHHHHTTTCSSEECCCSCSSTTCCCCSEE
T ss_pred HHCCCCEEECCCCCCHHHHHHHHHC-CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 3048762432666677999999726-876888878875499987589999999986078967157886444566678348
Q 000932 684 IRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFK 762 (1221)
Q Consensus 684 I~HyaG~V~Y~~~gfleKNrD~l~~d~~~ll~~S~~~l-~~lF~~~~~~~~~~~~~~~~~~~~~~~~~tV~~~Fk~qL~~ 762 (1221)
|+||||+|.|+++|||+||+|++++|++.||++|++++ ..||.......+ .+.+..+......||+++|+.||+.
T Consensus 580 I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~g----~~~~~k~~~~~~~Tv~~~fk~sL~~ 655 (837)
T 1kk8_A 580 LHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAG----GGKKKKGKSSAFQTISAVHRESLNK 655 (837)
T ss_dssp EEETTEEEEECCSSHHHHHSCCCCHHHHHHHHTCSSHHHHHHTCC----------------------CCHHHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCC----CCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 761067646367778774145334999999874648899998356632247----7888788888888269999999999
Q 000932 763 LMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQL--SQDP 840 (1221)
Q Consensus 763 Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~--~~d~ 840 (1221)
||++|++|+||||||||||+.+.|+.||..+|++||||+||||++||+|+|||+|++|.+|+.||++|.+...+ ..|+
T Consensus 656 Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~f~eF~~RY~~L~~~~~~~~~~d~ 735 (837)
T 1kk8_A 656 LMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 735 (837)
T ss_dssp HHHHHTTEEEEEEEEECCCSSCCTTCCCHHHHHHHHTTSSSCC-----CCCSCEEEEHHHHHHHHGGGSGGGCCC---CH
T ss_pred HHHHHHCCCCEEEEEECCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 99998705973144147886578100261211022415675189999987400136699999999996323255678888
Q 000932 841 LSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQKCFRGYQARSRFREL---CNGVITLQSFA 916 (1221)
Q Consensus 841 ~~~~~~iL~~l~l~~~~~qiGkTKVFLr~g~la~LE~~R~~~l~-aai~IQk~~Rg~laRk~y~~l---r~aai~IQs~~ 916 (1221)
+..|+.||..++++++.|++|+||||||.++++.||.+|...+. .++.||++||||++|++|+++ +.++++||+.|
T Consensus 736 k~~~~~ll~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~ 815 (837)
T 1kk8_A 736 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNI 815 (837)
T ss_dssp HHHHHHHHHHHTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999973998200566677999615299999999999887679999999999999999999999999999999999
Q 000932 917 RGENTRRRHASLG 929 (1221)
Q Consensus 917 Rg~~aRr~y~~lr 929 (1221)
|++.+|+.|..++
T Consensus 816 R~~~~~r~~~w~~ 828 (837)
T 1kk8_A 816 RKWLVLRNWQWWK 828 (837)
T ss_dssp HHHHHHHTCHHHH
T ss_pred HHHHHHCCHHHHH
T ss_conf 9999973539999
No 5
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=1.00 E-value=1 Score=1780.55 Aligned_cols=770 Identities=38% Similarity=0.626 Sum_probs=709.7
Q 000932 158 KLRVWCRLEDGKWESGMIQSTSGDEAFVLLS-NGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRD 236 (1221)
Q Consensus 158 ~~~vW~~~~~~~~~~~~i~~~~~~~~~v~~~-~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~LnE~svL~~L~~Ry~~~ 236 (1221)
+.+||+|+++++|..|+|++..++.++|.+. +|++++|+.+++.++||+.+++++||+.|++|||++|||||+.||.++
T Consensus 8 ~~~vwv~~~~~~~~~~~v~~~~~~~~~v~~~~~~~~~~v~~~~~~~~np~~~~~~~Dl~~L~~l~e~~vl~nL~~Ry~~~ 87 (995)
T 2ycu_A 8 RRLVWVPSELHGFEAAALRDEGEEEAEVELAESGRRLRLPRDQIQRMNPPKFSKAEDMAELTCLNEASVLHNLRERYYSG 87 (995)
T ss_dssp GCEEEEEETTTEEEEEEEEEECSSEEEEEETTTCCEEEEEGGGCEECCCGGGTTCSBGGGCSSCSHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCCEEEEEEEEECCCEEEEEECCCCEEEEEEHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf 98699987988668899998649869999879972899607875667973124511056640355889999999998607
Q 000932 237 MIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAM 314 (1221)
Q Consensus 237 ~iYT~~G~iLIaVNP~k~l~lY~~~~~~~Y~~~~~~--~PHiyaiA~~Ay~~m~~~~~nQsIiisGESGAGKTet~K~il 314 (1221)
+||||+|++|||||||+++|+|+++++..|+++... ||||||||+.||++|+.+++||||||||||||||||++|++|
T Consensus 88 ~iYTy~G~ilvavNPyk~l~iy~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~~m~~~~~~QsIiisGESGAGKTe~~K~i~ 167 (995)
T 2ycu_A 88 LIYTYSGLFCVVINPYKQLPIYTEAIVEMYRGKKRHEVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKTENTKKVI 167 (995)
T ss_dssp CCEEEETTEEEEECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHCCCEEEEEECBTTSSHHHHHHHHH
T ss_pred CEEEECCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHH
T ss_conf 60340475136657865667899899998507765778862999868999998751799579956878987413299999
Q 000932 315 QYLAALGGGS---------EGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVV 385 (1221)
Q Consensus 315 ~yLa~~~~~~---------~~ie~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv 385 (1221)
+||++++++. ..++++|+++||||||||||||++|||||||||||+|+|+.+|.|+||+|.+|||||||||
T Consensus 168 ~yla~~~~~~~~~~~~~~~~~ie~~il~~npiLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i~~yLLEksRvv 247 (995)
T 2ycu_A 168 QYLAHVASSPKGRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETYLLEKSRAI 247 (995)
T ss_dssp HHHHHHSCCSSSCSSSCCCC-CCSTTTSHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEEEEECCCGGGGT
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEE
T ss_conf 99977433677655555424399999999999997248537999987866357999988999873358899844687342
Q 000932 386 QLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLA 465 (1221)
Q Consensus 386 ~~~~gERnfHIFYqLl~G~~~~~r~~l~L~~~~~y~yL~~~~~~~~~~~dD~~~f~~l~~Al~~lG~s~~e~~~if~iLa 465 (1221)
.|++||||||||||||+|+++++++.|+|.++.+|+||++++ ..+++ ||+++|..++.||++|||+++++..||+|||
T Consensus 248 ~q~~~ERnfHIFYqll~g~~~~~~~~l~L~~~~~y~yl~~~~-~~~~~-dD~~~f~~~~~A~~~lg~~~~e~~~i~~ila 325 (995)
T 2ycu_A 248 RQAKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRFLTNGP-SSSPG-QERELFQETLESLRVLGFSHEEIISMLRMVS 325 (995)
T ss_dssp CCCTTCCCBHHHHHHHHHCCHHHHHHTTCCCGGGCTTSTTCS-CSSTT-THHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCCCC-CCCCC-CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 237998750228997728998899870799967715114886-03688-5799999999999974899999999999999
Q 000932 466 AVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGS 545 (1221)
Q Consensus 466 AILhLGNi~F~~~~~~~~~~~~~~~~l~~aA~LLgv~~~~L~~~Lt~r~~~~~~e~i~~~l~~~qA~~~RDaLak~LY~~ 545 (1221)
||||||||+|...++++.+.+.+.+.++.||.||||++++|.++||++++.+|+|.++++++++||.++||||||+||++
T Consensus 326 aILhlGni~F~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~ 405 (995)
T 2ycu_A 326 AVLQFGNIALKRERNTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYER 405 (995)
T ss_dssp HHHHGGGCCCEECSSSCCEECSCCHHHHHHHHHTTCCHHHHHHHHHSCEEESSSSEEECCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99964364476237876523078699999999979899999997338488738832347999999999999999999999
Q 000932 546 LFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEF 625 (1221)
Q Consensus 546 LF~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNErLQ~~f~~~iF~~eqeeY~~EgI~~~~i~f 625 (1221)
||+|||.+||.+|.........+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||.+|||+|+.|+|
T Consensus 406 LF~wlV~~iN~~l~~~~~~~~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f 485 (995)
T 2ycu_A 406 LFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDF 485 (995)
T ss_dssp HHHHHHHHHHHHHCCCSCCCSEEEEEEECCCBCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999999726887776433887336430335434089998876678999999874018888987604887420355
Q 000932 626 -EDNEECLNLIEK--KPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGER----GRAFSIRHYAGEVPYDTNGF 698 (1221)
Q Consensus 626 -~dn~~~ldLie~--kp~Gll~lLDeE~~~p~~td~tfl~kl~~~~~~~~~f~~~~----~~~F~I~HyaG~V~Y~~~gf 698 (1221)
.||++|||||++ +|.|||+||||||++|++||.+|++||...|++|++|..++ ...|+|+||||+|.|+++||
T Consensus 486 ~~dn~~~idlie~~~~p~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~~f~~~~~~~~~~~F~i~HyAG~V~Y~~~gf 565 (995)
T 2ycu_A 486 GLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEW 565 (995)
T ss_dssp SCCCHHHHHHHHCCSSSCCHHHHHHHSSSSTTCCHHHHHHHHHHHHTTSTTEECCCTTTCCSSEEEEETTEEEEECCTTH
T ss_pred CCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCH
T ss_conf 66759999998266899846556578736999866999999998517887711688667888058777877735551164
Q 000932 699 LEKNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSPKPAAS--S-QPGA--LDTQKQSVGTKFKGQLFKLMHQLENTRP 772 (1221)
Q Consensus 699 leKNrD~l~~d~~~ll~~S~~~l-~~lF~~~~~~~~~~~~~~--~-~~~~--~~~~~~tV~~~Fk~qL~~Lm~~L~~t~~ 772 (1221)
|+||+|+++++++.||++|++++ ..||.......+..+..| . ..|+ ......||+++|+.||+.||++|++|+|
T Consensus 566 leKN~D~l~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~p 645 (995)
T 2ycu_A 566 LMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNP 645 (995)
T ss_dssp HHHHHCCCCHHHHHHHHTCSSHHHHHHTSSCCSSCSCCC-------------CCCSSCCHHHHHHHHHHHHHHHHHTSEE
T ss_pred HHHCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 55415643399999998471789999840533334432123566666666767898774489999999999999982596
Q 000932 773 HFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQL--SQDPLSISVAVLQQ 850 (1221)
Q Consensus 773 hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~--~~d~~~~~~~iL~~ 850 (1221)
|||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|+.||++|.+...+ ..|++..|+.||..
T Consensus 646 hfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~~~~~~~~~d~~~~~~~ll~~ 725 (995)
T 2ycu_A 646 SFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTPNAIPKGFMDGKQACEKMIQA 725 (995)
T ss_dssp EEEEEECCCSSCCTTCCCTTTHHHHHHHHTHHHHHHHHHHSCCEEEEHHHHHHHHGGGSTTTSCSCCCCSCCSCCCSCCC
T ss_pred CEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 00363568864432660778878884144528879899746875365999999999708252556677779999999997
Q 000932 851 FNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQA------IIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRR 924 (1221)
Q Consensus 851 l~l~~~~~qiGkTKVFLr~g~la~LE~~R~~~l~a------ai~IQk~~Rg~laRk~y~~lr~aai~IQs~~Rg~~aRr~ 924 (1221)
++++++.|++|+||||||.++++.||.+|...+.. +..++.|+|+..++..++..+.+++.+|++||++.+++.
T Consensus 726 ~~~~~~~~~~G~tkVF~r~~~~~~LE~~R~~~l~~~eYe~~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~ 805 (995)
T 2ycu_A 726 LELDPNLYRVGQSKIFFRAGVLAQLEEERASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKK 805 (995)
T ss_dssp SSEEESSEEEESSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHH
T ss_pred CCCCHHHEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 59980122643468998222055489999997534467778889999999999999887776549999999999999988
Q 000932 925 HASLG 929 (1221)
Q Consensus 925 y~~lr 929 (1221)
.....
T Consensus 806 ~ekpp 810 (995)
T 2ycu_A 806 TEKPP 810 (995)
T ss_dssp HTHHH
T ss_pred HHCCC
T ss_conf 75462
No 6
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=1.00 E-value=1 Score=1776.41 Aligned_cols=752 Identities=43% Similarity=0.717 Sum_probs=694.6
Q 000932 156 KKKLRVWCRLEDGKWESGMIQST---SGDEAFVLLSNGNVVKVST----GELLP-ANPDILEGVDDLIQLSYLNEPSVLN 227 (1221)
Q Consensus 156 ~~~~~vW~~~~~~~~~~~~i~~~---~~~~~~v~~~~g~~~~v~~----~~~~~-~np~~~~~~~Dl~~L~~LnE~svL~ 227 (1221)
.++.+||+|+++++|..|+|++. +++.++|.+++|++.+|+. +++.| +||+.+++++||+.|++|||++|||
T Consensus 8 ~~g~~vwv~~~~~~~~~~~v~~~~~~~~~~~~v~~~~g~~~~v~~~~~~~~~~~~~np~~~~~~~Dl~~L~~l~E~svL~ 87 (795)
T 1w7j_A 8 TKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDILVGENDLTALSYLHEPAVLH 87 (795)
T ss_dssp CTTCEEEEEETTTEEEEEEESSCCCTTCSEEEEECSSSSEEEEECCTTTTCCCCBCCCGGGTTCSSSTTCSCCSHHHHHH
T ss_pred CCCCEEEEECCCCCEEEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHCCCCCHHHHHCCCHHHHHH
T ss_conf 36988998889883589999851048995699998999889996667655565334832210411056552133788999
Q 000932 228 NIQYRY-SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGA 304 (1221)
Q Consensus 228 ~L~~Ry-~~~~iYT~~G~iLIaVNP~k~l~lY~~~~~~~Y~~~~~~--~PHiyaiA~~Ay~~m~~~~~nQsIiisGESGA 304 (1221)
||+.|| .+++||||+|++|||||||+++|+|+++++..|+++... ||||||||+.||++|+++++||||||||||||
T Consensus 88 nL~~Ry~~~~~IYTy~G~iLiavNPyk~l~iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay~~m~~~~~nQsIiisGESGA 167 (795)
T 1w7j_A 88 NLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGA 167 (795)
T ss_dssp HHHHHHHHHCCCEEEETTEEEEECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTS
T ss_pred HHHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 99999975266021157654773586445769999999870887667996173799999998674389808998088888
Q 000932 305 GKTETAKFAMQYLAALGGGS--EGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKS 382 (1221)
Q Consensus 305 GKTet~K~il~yLa~~~~~~--~~ie~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEks 382 (1221)
||||++|++|+||++++++. ..++++|+++||||||||||||+||||||||||||+|+|+.+|.|+||+|++||||||
T Consensus 168 GKTe~tK~i~~yla~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~YLLEKS 247 (795)
T 1w7j_A 168 GKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKS 247 (795)
T ss_dssp SHHHHHHHHHHHHHHHTCCSSSSCHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSCEEEEEEEEECCCGG
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECEEEECCCC
T ss_conf 73167999999998645788764068899998989997457407899973500367999987999786640207863466
Q 000932 383 RVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFA 462 (1221)
Q Consensus 383 RVv~~~~gERnfHIFYqLl~G~~~~~r~~l~L~~~~~y~yL~~~~~~~~~~~dD~~~f~~l~~Al~~lG~s~~e~~~if~ 462 (1221)
|||.|++||||||||||||+|+++++++.|+|.++.+|+||++++|..++++||+++|..++.||++|||+++++..||+
T Consensus 248 RVv~q~~gERNfHIFYqLlag~~~~~~~~l~L~~~~~y~yl~~~~~~~~~~~dD~~~f~~~~~Am~~lG~s~~e~~~i~~ 327 (795)
T 1w7j_A 248 RVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFR 327 (795)
T ss_dssp GGTCCCTTCCSBHHHHHHHHTTTSGGGGGGCCCCTTTSHHHHTTSCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 57434899873276999883999889987259996757642689987678854899999999999986999999999999
Q 000932 463 MLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFI 542 (1221)
Q Consensus 463 iLaAILhLGNi~F~~~~~~~~~~~~~~~~l~~aA~LLgv~~~~L~~~Lt~r~~~~~~e~i~~~l~~~qA~~~RDaLak~L 542 (1221)
|||||||||||+|...+++......+.+.++.||.||||++++|.++||++++.+++|.++++++++||.++||||||+|
T Consensus 328 ilaaILhLGNi~F~~~~~~~~~v~~~~~~l~~~a~LLgv~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~l 407 (795)
T 1w7j_A 328 ILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHI 407 (795)
T ss_dssp HHHHHHHHHTCCCEEEETTEEECCTTCHHHHHHHHHHTCCHHHHHHHHSEEEEECSSCEEEEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCEECCCCCHHHHHHHHHHHHHHH
T ss_conf 99999850673376348865153088489999999969899999997425689848940337899899999999999999
Q 000932 543 YGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTR 622 (1221)
Q Consensus 543 Y~~LF~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNErLQ~~f~~~iF~~eqeeY~~EgI~~~~ 622 (1221)
|++||+|||.+||.+|.... ....+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||.+|||+|+.
T Consensus 408 Y~rLF~wlV~~IN~~l~~~~-~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~ 486 (795)
T 1w7j_A 408 YANLFNWIVDHVNKALHSTV-KQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTL 486 (795)
T ss_dssp HHHHHHHHHHHHHHHHCCSS-CCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHCCCC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99889999999998616886-66605785136765556767799998774568999999988879999988855986212
Q 000932 623 VEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHL-GSNSCFKGER--GRAFSIRHYAGEVPYDTNGFL 699 (1221)
Q Consensus 623 i~f~dn~~~ldLie~kp~Gll~lLDeE~~~p~~td~tfl~kl~~~~-~~~~~f~~~~--~~~F~I~HyaG~V~Y~~~gfl 699 (1221)
|+|.||++|||||+++ .|||+||||||++|++||.+|++||.++| ++|++|..++ ...|+|+||||+|.|+++|||
T Consensus 487 i~f~DN~~~idLie~~-~GIlslLDEec~~p~~tD~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfl 565 (795)
T 1w7j_A 487 IDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFL 565 (795)
T ss_dssp CCCCCCHHHHHHHHST-TSHHHHHHHHHTSTTCCHHHHHHHHHHHHTTTCTTEECCTTCSSEEEEECSSCEEEEECTTHH
T ss_pred CCCCCCHHHHHHHHHC-CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEECHHHH
T ss_conf 4765649999999703-777876322216999874999999999862458763368778884377744257998035588
Q 000932 700 EKNRDPLQTDIIQLLSSCT-CQV-LQLFASKMLKPS---P---------K----PAASSQPGALDTQKQSVGTKFKGQLF 761 (1221)
Q Consensus 700 eKNrD~l~~d~~~ll~~S~-~~l-~~lF~~~~~~~~---~---------~----~~~~~~~~~~~~~~~tV~~~Fk~qL~ 761 (1221)
+||+|+++++++.||++|+ +++ ..||.......+ . + +..+...++...+.+||+++|+.||+
T Consensus 566 eKNkD~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~s~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~ 645 (795)
T 1w7j_A 566 EKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLH 645 (795)
T ss_dssp HHHHCCCCHHHHHHHHTCSSCSHHHHTTC---------------------------------------CCHHHHHHHHHH
T ss_pred HHCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 64035331999999972664379999733443334555543344554443344554566554557778728999999999
Q 000932 762 KLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPL 841 (1221)
Q Consensus 762 ~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~~~d~~ 841 (1221)
.||++|++|+||||||||||+.+.|+.||..+|++||||+||||++||+|+|||+|++|.+|+.||++|++......|++
T Consensus 646 ~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~~~~~~~d~k 725 (795)
T 1w7j_A 646 LLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRK 725 (795)
T ss_dssp HHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHHGGGSCGGGCCSCHH
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 99999862798678875788767812217110344553177089999997188740339999999998677656777878
Q 000932 842 SISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQKCFRGYQARSRFRELCNGV 909 (1221)
Q Consensus 842 ~~~~~iL~~l~l~~~~~qiGkTKVFLr~g~la~LE~~R~~~l~-aai~IQk~~Rg~laRk~y~~lr~aa 909 (1221)
..|+.||..+++++++|++|+||||||.++++.||.+|...+. +++.||++||||++|++|+++|.++
T Consensus 726 ~~~~~il~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 726 QTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHCCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHCCCCCCEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999998278953057768269974349999999999999999999999999999999999999743
No 7
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=1.00 E-value=1 Score=1755.52 Aligned_cols=722 Identities=44% Similarity=0.727 Sum_probs=680.2
Q 000932 158 KLRVW---CRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYS 234 (1221)
Q Consensus 158 ~~~vW---~~~~~~~~~~~~i~~~~~~~~~v~~~~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~LnE~svL~~L~~Ry~ 234 (1221)
+.+|| +|+++++|..|+|++..++.++|.+++|.+++|+.+++.++||+.+++++||+.|++|||++|||||+.||.
T Consensus 32 ~~~vW~~~v~~~~~~~~~~~v~~~~~~~~~v~~~~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~l~e~~vl~nL~~Ry~ 111 (1010)
T 1g8x_A 32 KRYIWYNPDPDERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNLRVRYN 111 (1010)
T ss_dssp CCEEEECSSTTCTTCCEEEEEEEEETTEEEEECSSSSEEEEETTTCCBCCCGGGTTCSBGGGCSSCCHHHHHHHHHHHHT
T ss_pred CCCEECCCCCCCCCCEEEEEEEEECCCEEEEEECCCCEEEECHHHCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 88563755768566835789998659757887369967995278665448611024103666622347899999999985
Q 000932 235 RDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKF 312 (1221)
Q Consensus 235 ~~~iYT~~G~iLIaVNP~k~l~lY~~~~~~~Y~~~~~~--~PHiyaiA~~Ay~~m~~~~~nQsIiisGESGAGKTet~K~ 312 (1221)
.++||||+|++|||||||+++|+|+++++..|+++... ||||||||+.||++|+.+++||||||||||||||||++|+
T Consensus 112 ~~~iYTy~G~ilvavNPyk~l~iy~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~~m~~~~~~QsIiisGESGAGKTe~~K~ 191 (1010)
T 1g8x_A 112 QDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKK 191 (1010)
T ss_dssp TTCCEEEETTEEEEECCSSCCSCCSHHHHHHHTTCCTTTSCCCHHHHHHHHHHHHHHHTCCEEEEEEESTTSSHHHHHHH
T ss_pred HCCCEECCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHH
T ss_conf 08723415852687469745467998999874278756788609999779999987427981899957779871038989
Q 000932 313 AMQYLAALGGGS-----EGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQL 387 (1221)
Q Consensus 313 il~yLa~~~~~~-----~~ie~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv~~ 387 (1221)
+|+||++++++. ..++++|+++||||||||||||++|||||||||||+|+|+.+|.|+||+|.+|||||||||.|
T Consensus 192 i~~yla~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i~~yLLEksRvv~q 271 (1010)
T 1g8x_A 192 VIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQ 271 (1010)
T ss_dssp HHHHHHHHHCCCCTTTSSHHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCC
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEE
T ss_conf 99999875335777642429999999888999727985889997553425799998899987101799997678534200
Q 000932 388 AAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAV 467 (1221)
Q Consensus 388 ~~gERnfHIFYqLl~G~~~~~r~~l~L~~~~~y~yL~~~~~~~~~~~dD~~~f~~l~~Al~~lG~s~~e~~~if~iLaAI 467 (1221)
++||||||||||||+|+++++++.|+|.++.+|+||++++|..++++||+++|..++.||++|||+++++..||+|||||
T Consensus 272 ~~~ERnfHIFYqll~g~~~~~~~~l~L~~~~~y~yl~~~~~~~~~~~dD~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaI 351 (1010)
T 1g8x_A 272 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351 (1010)
T ss_dssp CTTCCCBHHHHHHHHHCCHHHHHHHTCCCGGGCGGGSSSSCCCCBTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHCCCCHHHHHHHCCCCHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 58987512289977399999998707999676501227986335887769999999999997389999999999999999
Q 000932 468 LWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLF 547 (1221)
Q Consensus 468 LhLGNi~F~~~~~~~~~~~~~~~~l~~aA~LLgv~~~~L~~~Lt~r~~~~~~e~i~~~l~~~qA~~~RDaLak~LY~~LF 547 (1221)
||||||+|...++ +.+.+.+.+.++.||.||||++++|.++||++++.+++|.++++++++||.++||||||+||++||
T Consensus 352 LhLGni~F~~~~~-~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~LF 430 (1010)
T 1g8x_A 352 LHLGNIKFEKGAG-EGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLF 430 (1010)
T ss_dssp HHHTTCCCBCCTT-SSCBCSCCHHHHHHHHHHTSCHHHHHHHHHSCEEESSSSEEECCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEECCC-CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9746644773588-764258759999999997989999999870867784881698489999999999999999999999
Q 000932 548 DWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE- 626 (1221)
Q Consensus 548 ~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNErLQ~~f~~~iF~~eqeeY~~EgI~~~~i~f~- 626 (1221)
+|||.+||.+|.... ...+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||.+|||+|+.|+|.
T Consensus 431 ~wlV~~IN~~l~~~~--~~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~ 508 (1010)
T 1g8x_A 431 LWLVKKINNVLCSER--KAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGL 508 (1010)
T ss_dssp HHHHHHHHHHHCCSS--CSEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCC
T ss_pred HHHHHHHHHHHCCCC--CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 999999998716787--675456326765335776759999987535899999998765888888621588865056666
Q 000932 627 DNEECLNLIEK-KPLGVLSLLDEESNFPKATDLTFANKLKQHLG-SNSCFKGER--GRAFSIRHYAGEVPYDTNGFLEKN 702 (1221)
Q Consensus 627 dn~~~ldLie~-kp~Gll~lLDeE~~~p~~td~tfl~kl~~~~~-~~~~f~~~~--~~~F~I~HyaG~V~Y~~~gfleKN 702 (1221)
||++|||||++ +|.|||+||||||++|++||.+|++|+.++++ +||+|..++ ...|+|+||||+|.|+++|||+||
T Consensus 509 dn~~~idlie~~~~~Gil~lLdee~~~p~~td~~f~~kl~~~~~~~~~~f~~~~~~~~~F~i~HyAG~V~Y~~~gfleKN 588 (1010)
T 1g8x_A 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKN 588 (1010)
T ss_dssp CSHHHHHHHHCTTTTCHHHHHHHHTTSSSCCHHHHHHHHHHHHTTTCTTEECCTTCSSEEEEEETTEEEEEECTTHHHHH
T ss_pred CHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECEEEEEEECCCCCCC
T ss_conf 76999999836799810000167747999973889999998836789784468888997777640327898336814203
Q 000932 703 RDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPN 781 (1221)
Q Consensus 703 rD~l~~d~~~ll~~S~~~l-~~lF~~~~~~~~~~~~~~~~~~~~~~~~~tV~~~Fk~qL~~Lm~~L~~t~~hfIrCIkPN 781 (1221)
+|+++++++.||.+|++++ ..+|.... ..+ + .+ ......||+++|+.||+.||++|++|+||||||||||
T Consensus 589 ~D~l~~~~~~ll~~S~~~~~~~lf~~~~-~~~-~----~~---k~~~~~tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN 659 (1010)
T 1g8x_A 589 KDPLQQDLELCFKDSSDNVVTKLFNDPN-IAS-R----AK---KGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPN 659 (1010)
T ss_dssp HCCCCHHHHHHHTTCSCHHHHHHHHCHH-HHS-C----CC---CSSSCCCHHHHHHHHHHHHHHHHTTSEEEEEEEECSC
T ss_pred CCCCCHHHHHHHHHCCHHHHHHHHCCCC-CCC-C----CC---CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 5644499999998581789999840535-335-7----87---7887873699999999999999972597435534687
Q 000932 782 SKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQL--SQDPLSISVAVLQQFNVLPEMYQ 859 (1221)
Q Consensus 782 ~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~--~~d~~~~~~~iL~~l~l~~~~~q 859 (1221)
+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|+.||++|.+. .+ ..|++..|+.||..++++++.|+
T Consensus 660 ~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~~-~~~~~~d~~~~~~~ll~~~~~~~~~~~ 738 (1010)
T 1g8x_A 660 NKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPN-VPRDAEDSQKATDAVLKHLNIDPEQYR 738 (1010)
T ss_dssp SSCCTTCCCHHHHHHHHHHSSHHHHHHHHTTSCCEEEEHHHHHHHHGGGSTT-CCTTCSCHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCCCCHHHCCHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHHHHCCCCCCCEE
T ss_conf 6555577573422225056765788879971886026099999999874777-776778889999999997499941055
Q 000932 860 VGYTKLYLRSGQLAALEDRRKQVLQA-IIRLQKC 892 (1221)
Q Consensus 860 iGkTKVFLr~g~la~LE~~R~~~l~a-ai~IQk~ 892 (1221)
+|+||||||.++++.||.+|...+.. ++.||-.
T Consensus 739 ~G~tkVF~r~~~l~~LE~~R~~~l~~~~~~iQY~ 772 (1010)
T 1g8x_A 739 FGITKIFFRAGQLARIEEAREQRLGSEQTKSDYL 772 (1010)
T ss_dssp ECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3015544133310688999998999999999999
No 8
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=1.00 E-value=1 Score=1737.58 Aligned_cols=729 Identities=38% Similarity=0.662 Sum_probs=676.4
Q 000932 148 EDNLGYFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLN 227 (1221)
Q Consensus 148 ~~~~~~~~~~~~~vW~~~~~~~~~~~~i~~~~~~~~~v~~~~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~LnE~svL~ 227 (1221)
..+.+|.. |.+||+|+|+++|..|+|++..+++++|.+++|++++|+.+++.++||+.+++++||+.|++|||++|||
T Consensus 26 ~~~~~~~~--~~~vWv~d~~~~~~~~~v~~~~~~~~~v~~~~g~~~~v~~~~v~~~np~~~~~~eDl~~L~~LnE~svL~ 103 (783)
T 4db1_A 26 AQTRPFDL--KKDVFVPDDKQEFVKAKIVSREGGKVTAETEYGKTVTVKEDQVMQQNPPKFDKIEDMAMLTFLHEPAVLY 103 (783)
T ss_dssp HHHSCCCT--TTEEEEECSSSSEEEEEEEEECSSEEEEEETTTEEEEEEGGGCEECCCGGGTTCSBGGGCSCCSHHHHHH
T ss_pred HHCCCCCC--CCEEEEECCCCCEEEEEEEEECCCEEEEEECCCCEEECCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHH
T ss_conf 63267768--9879998787887889999715977999978997896788871457997557703243266321789999
Q 000932 228 NIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAG 305 (1221)
Q Consensus 228 ~L~~Ry~~~~iYT~~G~iLIaVNP~k~l~lY~~~~~~~Y~~~~~~--~PHiyaiA~~Ay~~m~~~~~nQsIiisGESGAG 305 (1221)
||+.||.+++||||+|++|||||||+++|+|+++++..|+++... ||||||||+.||++|+.+++|||||||||||||
T Consensus 104 nL~~Ry~~~~IYTy~G~iLvavNPyk~l~iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay~~m~~~~~nQsIiiSGESGAG 183 (783)
T 4db1_A 104 NLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFSISDNAYQYMLTDRENQSILITGESGAG 183 (783)
T ss_dssp HHHHHHHTTCCEEEETTEEEEECCSSCCSCSSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSS
T ss_pred HHHHHHCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 99998627953773376267458886578799899998617876789963458999999998863798269983777888
Q 000932 306 KTETAKFAMQYLAALGGGS-----------EGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKI 374 (1221)
Q Consensus 306 KTet~K~il~yLa~~~~~~-----------~~ie~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i 374 (1221)
|||++|++|+||+++++.. ..++++|+++||||||||||||+||||||||||||+|+|+.+|.|+||+|
T Consensus 184 KTe~tK~im~yla~v~~~~~~~~~~~~~~~~~ve~~il~snpiLEAFGNAkT~rNdNSSRFGK~i~i~F~~~g~i~Ga~I 263 (783)
T 4db1_A 184 KTVNTKRVIQYFAVIAAIGDRSKKDQSPGKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADI 263 (783)
T ss_dssp HHHHHHHHHHHHHHHSBCCCC-------CCSCHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSBEEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
T ss_conf 71379999876544336787554334544353999999867899863575568999877331668999879997735578
Q 000932 375 QTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNL-KVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIR 453 (1221)
Q Consensus 375 ~~yLLEksRVv~~~~gERnfHIFYqLl~G~~~~~r~~l~L-~~~~~y~yL~~~~~~~~~~~dD~~~f~~l~~Al~~lG~s 453 (1221)
++|||||||||.|++||||||||||||+|+++++++.|+| .++.+|+||+++ +..++++||+++|..++.||++|||+
T Consensus 264 ~~YLLEKSRVv~q~~gERnfHIFYqLlaG~~~~~~~~l~L~~~~~~y~yl~~g-~~~~~~~dD~~~f~~~~~Am~~lGfs 342 (783)
T 4db1_A 264 ETYLLEKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQG-ETTVASIDDAEELMATDNAFDVLGFT 342 (783)
T ss_dssp EEECCCGGGGTCCCTTCCSBHHHHHHHTCSSHHHHHHTTCCSCGGGCGGGCSS-CCCCTTCCHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCEEECCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCHHHCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 88622354021468888700019998719999999975458998877202699-85558987199999999999875999
Q 000932 454 KEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAID 533 (1221)
Q Consensus 454 ~~e~~~if~iLaAILhLGNi~F~~~~~~~~~~~~~~~~l~~aA~LLgv~~~~L~~~Lt~r~~~~~~e~i~~~l~~~qA~~ 533 (1221)
++++..||+|||||||||||+|...++++.+.+.+.+.++.||.||||++++|.++||++++.+++|.++++++++||.+
T Consensus 343 ~~e~~~i~~ilaaILhLGNi~F~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aL~~~~i~~~~e~v~~~~~~~qA~~ 422 (783)
T 4db1_A 343 SEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIY 422 (783)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECTTSSCEEESCCHHHHHHHHHTTCCHHHHHHHHHSCC------CCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCEEEEECCCHHHHHH
T ss_conf 99999999999999941564565057776542588699999999849999999986405089858814860799999999
Q 000932 534 SRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEY 613 (1221)
Q Consensus 534 ~RDaLak~LY~~LF~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNErLQ~~f~~~iF~~eqeeY 613 (1221)
+||||||+||++||+|||.+||.+|... .....+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||
T Consensus 423 ~rdalAK~lY~rLF~wlV~~IN~~l~~~-~~~~~~IGvLDI~GFE~f~~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY 501 (783)
T 4db1_A 423 ATGALAKAVYERMFNWMVTRINATLETK-QPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEY 501 (783)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCS-CCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999998752899-888845999436642345647799999888789999999998767778776
Q 000932 614 ELDGVDWTRVEFE-DNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHL-GSNSCFKGER------GRAFSIR 685 (1221)
Q Consensus 614 ~~EgI~~~~i~f~-dn~~~ldLie~kp~Gll~lLDeE~~~p~~td~tfl~kl~~~~-~~~~~f~~~~------~~~F~I~ 685 (1221)
.+|||+|+.|+|. ||++|||||++ |.|||+||||||++|++||.+|++||++.| ++|++|..++ ...|+|+
T Consensus 502 ~~EgI~w~~i~f~~Dn~~~idLiek-p~Gil~lLDEec~~p~~tD~tf~~kl~~~~~~~~~~f~~~~~~k~~~~~~F~I~ 580 (783)
T 4db1_A 502 KKEGIEWTFIDFGMDLQACIDLIEK-PMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLI 580 (783)
T ss_dssp HHHTCCCCCCCGGGGGHHHHHHHHS-TTSHHHHHCC-TTCTTCCHHHHHHHHHHHHTTTCTTEECCCC----C-CCEEEE
T ss_pred HHCCCCCCCCCCCCCHHHHHHHHHC-CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 6407776545656771999999967-873676526876589897799999999985378977467887777779973886
Q 000932 686 HYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSPKPAASSQP-GALDTQKQSVGTKFKGQLFKL 763 (1221)
Q Consensus 686 HyaG~V~Y~~~gfleKNrD~l~~d~~~ll~~S~~~l-~~lF~~~~~~~~~~~~~~~~~-~~~~~~~~tV~~~Fk~qL~~L 763 (1221)
||||+|.|+++|||+||+|+++.+++.||++|++++ ..||.......+ +..+.+. .......+||+++||.||+.|
T Consensus 581 HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~lf~~~~~~~~--~~~~~~~~~~~~~~~~Tv~~~fk~sL~~L 658 (783)
T 4db1_A 581 HYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGADA--PIEKGKGKAKKGSSFQTVSALHRENLNKL 658 (783)
T ss_dssp ETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHHHHSCC--------------------CCCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 7677667847684654545101889999997765899998641234544--44576677776887766899999899999
Q 000932 764 MHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLS---QDP 840 (1221)
Q Consensus 764 m~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~~---~d~ 840 (1221)
|++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|+.||++|.|..... .|+
T Consensus 659 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~~~~~~~~~~d~ 738 (783)
T 4db1_A 659 MTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDS 738 (783)
T ss_dssp HHHHHTSEEEEEEEECCCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHHTSCCEEEEC-----------------------
T ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHEECCCCCHHHHEEEHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf 99987249778871578765687764653540001003737560203227886570899999999759443677777799
Q 000932 841 LSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVL 883 (1221)
Q Consensus 841 ~~~~~~iL~~l~l~~~~~qiGkTKVFLr~g~la~LE~~R~~~l 883 (1221)
+..|+.||+.+++++..|++|+||||||.++++.||.+|.+++
T Consensus 739 k~~~~~ll~~~~~~~~~~~~G~TKVFlr~g~~~~LE~~R~~~l 781 (783)
T 4db1_A 739 RKGAEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERL 781 (783)
T ss_dssp ---CCHHHHSSSSCGGGEEECSSEEEECTTHHHHHHHHC----
T ss_pred HHHHHHHHHHCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHH
T ss_conf 9999999996798957099878899977589999999999985
No 9
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=1.00 E-value=1 Score=1721.86 Aligned_cols=731 Identities=37% Similarity=0.611 Sum_probs=673.2
Q 000932 160 RVWCRLEDGKWESGMIQSTSGDEAFVLLS--NGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDM 237 (1221)
Q Consensus 160 ~vW~~~~~~~~~~~~i~~~~~~~~~v~~~--~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~LnE~svL~~L~~Ry~~~~ 237 (1221)
+||+|+++++|..|+|++..++.++|.+. +|++++++.+++.|+||+..++++||+.|++|||++|||||+.||.+++
T Consensus 2 ~vWv~~~~~~~~~~~v~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~Dl~~L~~L~E~svL~nL~~Ry~~~~ 81 (784)
T 2v26_A 2 PVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDR 81 (784)
T ss_dssp CEEEEETTTEEEEEEEEEECSSEEEEEC----CCCEEEEGGGCEECCSCSSCCCSBGGGSSSCSHHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCCEEEEEEEEECCCEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCC
T ss_conf 59998697737889999964985999997799978998612223355555434101566531227899999999985076
Q 000932 238 IYSKAGPVLIAVNPFKAV-PIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAM 314 (1221)
Q Consensus 238 iYT~~G~iLIaVNP~k~l-~lY~~~~~~~Y~~~~~~--~PHiyaiA~~Ay~~m~~~~~nQsIiisGESGAGKTet~K~il 314 (1221)
||||+|++|||||||+++ |+|+++++..|+++... ||||||||+.||++|+.+++||||||||||||||||++|++|
T Consensus 82 IYTy~G~iLiaVNPyk~l~~iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay~~m~~~~~nQsIiiSGESGAGKTe~tK~i~ 161 (784)
T 2v26_A 82 IYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVL 161 (784)
T ss_dssp CEEEETTEEEEECCSSCCTTTTSHHHHHHHTTCCTTSSCSCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHH
T ss_pred EEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHHHHH
T ss_conf 06601651799558867677899999999808875557826889999999999861899679975788888632399999
Q 000932 315 QYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSY 394 (1221)
Q Consensus 315 ~yLa~~~~~~~~ie~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv~~~~gERnf 394 (1221)
+||++++++...++++|+++||||||||||||+||||||||||||+|+|+.+|.|+||+|.+|||||||||.|++|||||
T Consensus 162 ~yla~~~~~~~~ie~~il~snpiLEAFGNAKT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~YLLEKSRVv~q~~gERNf 241 (784)
T 2v26_A 162 RYLTESYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNY 241 (784)
T ss_dssp HHHHHHHC------CHHHHTHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSCEEEEEEEEECCCCGGGTCCCTTCCSB
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEECCCCEEEEEEEEEECCCCEEEEECCCCCCC
T ss_conf 99975447998689999988779987278768899973510458999980698371255325541377676106898761
Q 000932 395 HIFYQLCAGAPSFLKERLNLKVANDYNYLNQSEC--------------------------LTIDGVDDAQNFHNLMEALD 448 (1221)
Q Consensus 395 HIFYqLl~G~~~~~r~~l~L~~~~~y~yL~~~~~--------------------------~~~~~~dD~~~f~~l~~Al~ 448 (1221)
|||||||+|+++++++.|+|.++.+|+||+++.+ ..++++||+++|..++.||+
T Consensus 242 HIFYqLlaG~~~~~~~~l~L~~~~~y~yL~~g~~~~~~~~~~~~~i~~~~~s~~~~~~~~~~~~~~dD~~~f~~~~~Am~ 321 (784)
T 2v26_A 242 HIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMK 321 (784)
T ss_dssp HHHHHHHHHSCHHHHHHTTCCCGGGCHHHHTSCCCCBCCHHHHTTSCGGGCCHHHHHHCCBCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 20689773999999987079985647531579755445554211234211232112455557788777999999999999
Q 000932 449 IVLIRKEDREQTFAMLAAVLWLGNISFQVIDN-ENHVE--VIADEAVTTAAMLMGCSSDELMLALSTHKIQ-----AGKD 520 (1221)
Q Consensus 449 ~lG~s~~e~~~if~iLaAILhLGNi~F~~~~~-~~~~~--~~~~~~l~~aA~LLgv~~~~L~~~Lt~r~~~-----~~~e 520 (1221)
+|||+++++..||+|||||||||||+|...++ ++.+. ..+.+.++.||.||||++++|.++||+|++. ++++
T Consensus 322 ~lG~~~~e~~~i~~ilaaILhLGNi~F~~~~~~~~~~~v~~~~~~~l~~~a~LLgv~~~~L~~aL~~r~~~t~~g~~~ge 401 (784)
T 2v26_A 322 KIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGT 401 (784)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHTCCEEECTTTTSSEEECGGGHHHHHHHHHHHTCCHHHHHHHHHEEEC----------
T ss_pred HCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCEEECCCCCCCCC
T ss_conf 86989999999999999998205522641367777630136887999999998498999999997421885334577887
Q 000932 521 SIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQH 600 (1221)
Q Consensus 521 ~i~~~l~~~qA~~~RDaLak~LY~~LF~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNErLQ~~ 600 (1221)
.++++++++||.++||||||+||++||+|||.+||.+|... ....+||||||||||+|+.|||||||||||||+|||+
T Consensus 402 ~i~~~l~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~--~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~ 479 (784)
T 2v26_A 402 VIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFE--TSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQF 479 (784)
T ss_dssp -CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCS--CCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 68615999999999999999999999999999999761756--6664444102677666776789999787777899999
Q 000932 601 FNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGER-- 678 (1221)
Q Consensus 601 f~~~iF~~eqeeY~~EgI~~~~i~f~dn~~~ldLie~kp~Gll~lLDeE~~~p~~td~tfl~kl~~~~~~~~~f~~~~-- 678 (1221)
||+|+|+.||+||.+|||+|+.|+|.||++|||||+++|.|||+||||||++|++||.+|++||++++++|++|..++
T Consensus 480 F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlslLDEe~~~p~~tD~~f~~kl~~~~~~~~~~~~p~~~ 559 (784)
T 2v26_A 480 FNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKS 559 (784)
T ss_dssp HHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSCCHHHHHHHHHHHTTTCTTEECGGGC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99745566788888608874324565709999998611563878899984689987589999999972788550357876
Q 000932 679 ----------GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSPKPAASSQPGALDT 747 (1221)
Q Consensus 679 ----------~~~F~I~HyaG~V~Y~~~gfleKNrD~l~~d~~~ll~~S~~~l-~~lF~~~~~~~~~~~~~~~~~~~~~~ 747 (1221)
...|+|+||||+|.|+++|||+||+|+++++++.||++|++++ ..||.......+.. +......
T Consensus 560 ~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~l~~Lf~~~~~~~~~~-----~~~~~~~ 634 (784)
T 2v26_A 560 KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDT-----KQKAGKL 634 (784)
T ss_dssp SSGGGTTSCTTSEEEEEETTEEEEEECTTHHHHTBCCCCHHHHHHHHTCSCHHHHHHC---------------------C
T ss_pred CCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCC-----CCCCCCC
T ss_conf 54434334677853766147207662147787525233399999998460247999704312356676-----6677777
Q 000932 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRY 827 (1221)
Q Consensus 748 ~~~tV~~~Fk~qL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gyp~R~~~~eF~~RY 827 (1221)
...||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|+.||
T Consensus 635 ~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY 714 (784)
T 2v26_A 635 SFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 714 (784)
T ss_dssp CCCBHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHHHTSCCSEEEEHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 55638999999999999998705974589866786223586453253402663653799999985188554299999998
Q 000932 828 GVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQ 897 (1221)
Q Consensus 828 ~~L~~~~~~~~d~~~~~~~iL~~l~l~~~~~qiGkTKVFLr~g~la~LE~~R~~~l~aai~IQk~~Rg~l 897 (1221)
++|+|......|++..|+.||..+++++.+|++|+||||||.++++.||..+.........|++..|+|+
T Consensus 715 ~~L~~~~~~~~d~~~~~~~ll~~~~~~~~~~~~G~TKVF~r~g~~~~le~~~~~~~~~~~~ii~~v~~wl 784 (784)
T 2v26_A 715 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWL 784 (784)
T ss_dssp GGGCCHHHHTSCHHHHHHHHHHHTTCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_conf 5238865677898999999999759795757837930887488899999997528999999999998449
No 10
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=1.00 E-value=1 Score=1712.22 Aligned_cols=717 Identities=43% Similarity=0.722 Sum_probs=673.0
Q 000932 157 KKLRVWCRLE---DGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRY 233 (1221)
Q Consensus 157 ~~~~vW~~~~---~~~~~~~~i~~~~~~~~~v~~~~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~LnE~svL~~L~~Ry 233 (1221)
.+.+||+|++ +++|..|+|++..++.++|..++|++++|+.+++.++||+.+++++||+.|++|||++|||||+.||
T Consensus 31 ~~~~vWv~~~~~~~~~~~~~~v~~~~~~~~~v~~~~g~~~~v~~~~v~~~np~~~~~~~Dl~~L~~l~E~svL~nL~~Ry 110 (770)
T 1w9i_A 31 DKRYIWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNLRVRY 110 (770)
T ss_dssp -CCEEEECSSTTCTTCCEEEEEEEECSSEEEEECTTSCEEEEETTTCEECCCGGGTTCSBGGGCSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCEEEEEEEECCCEEEEECCCCCEEEECHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 89879955786544672589999864976776438981899725763335850003423555531278899999999998
Q 000932 234 SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAK 311 (1221)
Q Consensus 234 ~~~~iYT~~G~iLIaVNP~k~l~lY~~~~~~~Y~~~~~~--~PHiyaiA~~Ay~~m~~~~~nQsIiisGESGAGKTet~K 311 (1221)
.+++||||+|++|||||||+++|+|+++++..|+++... ||||||||+.||++|+.+++||||||||||||||||++|
T Consensus 111 ~~~~IYTy~G~iLvavNPyk~l~iY~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~~m~~~~~nQsIiisGESGAGKTe~tK 190 (770)
T 1w9i_A 111 NQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTK 190 (770)
T ss_dssp HTTCCEEEETTEEEEECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHCCCEEEEEECSTTSSHHHHHH
T ss_pred HCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
T ss_conf 51872441585368846975656799899998428875778861999877999998753489379981677886328999
Q 000932 312 FAMQYLAALGGGS-----EGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQ 386 (1221)
Q Consensus 312 ~il~yLa~~~~~~-----~~ie~~il~snpILEAFGNAkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv~ 386 (1221)
++|+||++++++. ..++++|+++||||||||||||+||||||||||||+|+|+.+|.|+||+|.+|||||||||.
T Consensus 191 ~i~~yla~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~yLLEKSRVv~ 270 (770)
T 1w9i_A 191 KVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVF 270 (770)
T ss_dssp HHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEEEEECCCGGGGTC
T ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEC
T ss_conf 99999887344667765575899999999999984797588999867760699999889998813488898546760212
Q 000932 387 LAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNY-LNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLA 465 (1221)
Q Consensus 387 ~~~gERnfHIFYqLl~G~~~~~r~~l~L~~~~~y~y-L~~~~~~~~~~~dD~~~f~~l~~Al~~lG~s~~e~~~if~iLa 465 (1221)
|++||||||||||||+|+++++++.|+|.++.+|+| |+++ |..++++||+++|..++.||++|||+++++..||+|||
T Consensus 271 q~~gERnfHIFYqLlaG~~~~~~~~l~L~~~~~y~yll~~g-~~~~~~~dD~~~f~~~~~Am~~lGf~~~e~~~i~~ila 349 (770)
T 1w9i_A 271 QSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSG-CVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIA 349 (770)
T ss_dssp CCTTCCSBHHHHHHHHHCCHHHHHHHTCCCGGGCTTTSSSS-CCCCTTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 36898751218887628999999871799846511012577-40048876699999999999875989999999999999
Q 000932 466 AVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGS 545 (1221)
Q Consensus 466 AILhLGNi~F~~~~~~~~~~~~~~~~l~~aA~LLgv~~~~L~~~Lt~r~~~~~~e~i~~~l~~~qA~~~RDaLak~LY~~ 545 (1221)
||||||||+|. .++++.+.+.+.+.++.||.||||++++|.++||++++.+++|.++++++++||.++||||||+||++
T Consensus 350 aILhLGNi~F~-~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~r 428 (770)
T 1w9i_A 350 GILHLGNIKFE-KGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGR 428 (770)
T ss_dssp HHHHHHTCCCE-ECSSSSEECSCCHHHHHHHHHHTCCHHHHHHHHHSCEEEETTEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEE-CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 99962672574-27887344688699999999969899999998607678838806985889999999999999999999
Q 000932 546 LFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEF 625 (1221)
Q Consensus 546 LF~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNErLQ~~f~~~iF~~eqeeY~~EgI~~~~i~f 625 (1221)
||+|||.+||.+|.... . ..+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||.+|||+|+.|+|
T Consensus 429 LF~wlV~~IN~~l~~~~-~-~~~IGvLDI~GFE~F~~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f 506 (770)
T 1w9i_A 429 LFLWLVKKINNVLCQER-K-AYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 506 (770)
T ss_dssp HHHHHHHHHHHHHCCSC-C-SEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCG
T ss_pred HHHHHHHHHHHHHCCCC-C-CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
T ss_conf 99999999998715887-7-775663057653445647899999876378999999864027788876215877303023
Q 000932 626 E-DNEECLNLIEK-KPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCFKGERG--RAFSIRHYAGEVPYDTNGFLE 700 (1221)
Q Consensus 626 ~-dn~~~ldLie~-kp~Gll~lLDeE~~~p~~td~tfl~kl-~~~~~~~~~f~~~~~--~~F~I~HyaG~V~Y~~~gfle 700 (1221)
. ||++|||||++ +|.|||+||||||++|++||.+|++|| .+++++|++|..++. ..|+|+||||+|.|+++||++
T Consensus 507 ~~dn~~~idLiek~~p~GilslLDEec~~p~~tD~~f~~kL~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfle 586 (770)
T 1w9i_A 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLE 586 (770)
T ss_dssp GGGGHHHHHHHHCTTTTCHHHHHHHHHSSSSCCHHHHHHHHHHHHTTTSTTEECCSSCSSEEEEEETTEEEEEECTTHHH
T ss_pred CCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHH
T ss_conf 56728999997278987022433666079998768999999998557897845788888855753147653242368344
Q 000932 701 KNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIK 779 (1221)
Q Consensus 701 KNrD~l~~d~~~ll~~S~~~l-~~lF~~~~~~~~~~~~~~~~~~~~~~~~~tV~~~Fk~qL~~Lm~~L~~t~~hfIrCIk 779 (1221)
||+|+++++++.||++|++++ ..||..... .+. .+ ......||+++|+.||+.||++|++|+||||||||
T Consensus 587 KNkD~l~~~~~~ll~~S~~~~v~~Lf~~~~~-~~~-----~~---k~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIk 657 (770)
T 1w9i_A 587 KNKDPLQQDLELCFKDSSDNVVTKLFNDPNI-ASR-----AK---KGANFITVAAQYKEQLASLMATLETTNPHFVRCII 657 (770)
T ss_dssp HHHCCCCHHHHHHHHTCSSTTHHHHHHCHHH-HCC-----CE---ETTEECCHHHHHHHHHHHHHHHHHTSEEEEEEEEC
T ss_pred HCCCCCCHHHHHHHHHCHHHHHHHHHHCCCC-CCC-----CC---CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 4257230999999985647899998405578-887-----77---77877623698999999999999714964466456
Q 000932 780 PNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQL--SQDPLSISVAVLQQFNVLPEM 857 (1221)
Q Consensus 780 PN~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~--~~d~~~~~~~iL~~l~l~~~~ 857 (1221)
||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|+.||++|.+ ... ..|++..|+.||+.++++++.
T Consensus 658 PN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~-~~~~~~~d~k~~~~~lL~~~~~~~~~ 736 (770)
T 1w9i_A 658 PNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAP-NVPRDAEDSQKATDAVLKHLNIDPEQ 736 (770)
T ss_dssp SCSSCCSSCCCHHHHHHHHHHSSHHHHHHHTTSSCCEEEESCC------------------------------------C
T ss_pred CCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 88644347617441086745632699999998568633529999999998561-23467889899999999963999452
Q 000932 858 YQVGYTKLYLRSGQLAALEDRRKQVLQAII 887 (1221)
Q Consensus 858 ~qiGkTKVFLr~g~la~LE~~R~~~l~aai 887 (1221)
|++|+||||||.++++.||.+|.+.+..++
T Consensus 737 ~~~G~TKVF~r~~~l~~LE~~R~~~l~~~~ 766 (770)
T 1w9i_A 737 FRFGITKIFFRAGQLARIEEARELRGDYKD 766 (770)
T ss_dssp CCCCSSEEEECTTTTTC-------------
T ss_pred EEECCEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 776781189610599999999999999874
Done!