Query 000938
Match_columns 1218
No_of_seqs 299 out of 1393
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 02:22:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000938.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000938hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ef1_A RNA polymerase II subun 100.0 3.1E-63 1E-67 563.1 27.6 313 885-1216 5-441 (442)
2 3ef0_A RNA polymerase II subun 100.0 1.8E-60 6E-65 531.1 29.9 308 895-1216 9-371 (372)
3 3qle_A TIM50P; chaperone, mito 100.0 1.3E-33 4.5E-38 293.1 13.9 159 901-1125 31-190 (204)
4 2ght_A Carboxy-terminal domain 100.0 1.3E-30 4.5E-35 262.8 13.3 167 900-1121 11-180 (181)
5 3shq_A UBLCP1; phosphatase, hy 100.0 1.3E-30 4.3E-35 286.2 6.0 164 901-1122 137-309 (320)
6 2hhl_A CTD small phosphatase-l 99.9 1.4E-27 4.7E-32 244.5 13.4 157 901-1103 25-184 (195)
7 3l3e_A DNA topoisomerase 2-bin 99.7 2.6E-18 9E-23 160.1 9.3 90 1123-1217 11-103 (107)
8 3l46_A Protein ECT2; alternati 99.7 8.8E-19 3E-23 167.6 1.9 96 1116-1216 10-105 (112)
9 2cou_A ECT2 protein; BRCT doma 99.7 1.2E-18 4E-23 164.3 0.6 92 1121-1217 6-97 (109)
10 2d8m_A DNA-repair protein XRCC 99.7 2.4E-17 8.2E-22 159.1 7.8 89 1124-1217 19-107 (129)
11 3pa6_A Microcephalin; BRCT dom 99.6 2.2E-16 7.6E-21 149.7 8.8 93 1123-1216 3-95 (107)
12 4id3_A DNA repair protein REV1 99.6 3.3E-16 1.1E-20 140.1 7.8 87 1124-1217 4-92 (92)
13 2ebw_A DNA repair protein REV1 99.6 2.7E-15 9.3E-20 136.7 6.4 86 1125-1217 10-96 (97)
14 3olc_X DNA topoisomerase 2-bin 99.5 6.4E-15 2.2E-19 160.2 7.8 93 1120-1217 192-285 (298)
15 1wf6_A Similar to S.pombe -RAD 99.5 4.2E-14 1.4E-18 137.0 6.6 92 1119-1216 32-126 (132)
16 1l0b_A BRCA1; TANDEM-BRCT, thr 99.4 8.4E-14 2.9E-18 143.0 7.3 89 1124-1217 1-95 (229)
17 3pc6_A DNA repair protein XRCC 99.4 2.2E-13 7.5E-18 129.2 9.1 89 1126-1218 6-96 (104)
18 2nte_A BARD-1, BRCA1-associate 99.4 4.3E-13 1.5E-17 137.0 7.8 84 1129-1217 1-87 (210)
19 1t15_A Breast cancer type 1 su 99.4 4.1E-13 1.4E-17 135.8 7.2 84 1129-1217 3-92 (214)
20 2etx_A Mediator of DNA damage 99.3 1.5E-12 5E-17 134.1 8.6 86 1123-1217 5-91 (209)
21 3sqd_A PAX-interacting protein 99.3 7.3E-13 2.5E-17 138.4 5.8 89 1123-1217 9-98 (219)
22 3al2_A DNA topoisomerase 2-bin 99.2 7.9E-12 2.7E-16 132.0 8.1 87 1126-1217 5-94 (235)
23 3olc_X DNA topoisomerase 2-bin 99.2 1.6E-11 5.5E-16 133.7 8.1 83 1126-1213 104-186 (298)
24 3u3z_A Microcephalin; DNA repa 99.1 4.4E-11 1.5E-15 123.1 7.2 83 1130-1217 11-95 (199)
25 3l41_A BRCT-containing protein 99.1 4.2E-11 1.4E-15 125.7 5.9 82 1127-1217 5-87 (220)
26 2jw5_A DNA polymerase lambda; 99.1 2E-10 6.9E-15 108.6 8.2 93 1122-1217 6-104 (106)
27 3ii6_X DNA ligase 4; XRCC4, NH 99.1 3E-10 1E-14 121.4 9.5 94 1123-1216 160-263 (263)
28 1kzy_C Tumor suppressor P53-bi 99.0 5.6E-10 1.9E-14 119.2 8.8 93 1125-1217 13-136 (259)
29 2vxb_A DNA repair protein RHP9 99.0 9.7E-10 3.3E-14 116.4 8.9 87 1126-1216 1-116 (241)
30 1l7b_A DNA ligase; BRCT, autos 98.9 6.8E-10 2.3E-14 103.1 5.7 76 1125-1205 5-80 (92)
31 3ii6_X DNA ligase 4; XRCC4, NH 98.9 1.2E-09 4E-14 116.9 8.0 91 1120-1216 3-95 (263)
32 2k6g_A Replication factor C su 98.8 7.5E-09 2.6E-13 98.9 9.4 78 1124-1205 29-107 (109)
33 2ebu_A Replication factor C su 98.8 1.2E-08 4.1E-13 98.1 8.4 77 1125-1205 20-97 (112)
34 1z56_C DNA ligase IV; DNA repa 98.8 1.9E-09 6.4E-14 113.8 3.0 90 1123-1216 156-261 (264)
35 2ep8_A Pescadillo homolog 1; A 98.7 1.4E-08 4.7E-13 95.6 5.5 80 1125-1215 10-100 (100)
36 2cok_A Poly [ADP-ribose] polym 98.7 1.2E-08 4.1E-13 98.2 5.2 74 1125-1203 8-84 (113)
37 2coe_A Deoxynucleotidyltransfe 98.6 8.1E-08 2.8E-12 93.5 8.1 87 1126-1216 19-113 (120)
38 1z56_C DNA ligase IV; DNA repa 98.5 1.2E-08 4.1E-13 107.7 0.1 91 1125-1216 3-100 (264)
39 1l0b_A BRCA1; TANDEM-BRCT, thr 98.5 1.1E-07 3.7E-12 97.8 6.3 91 1123-1217 113-213 (229)
40 1t15_A Breast cancer type 1 su 98.4 1.1E-07 3.7E-12 96.3 4.0 90 1124-1217 112-211 (214)
41 3pc7_A DNA ligase 3; DNA repai 98.4 2.1E-07 7.2E-12 86.4 5.6 74 1125-1212 14-88 (88)
42 3u3z_A Microcephalin; DNA repa 98.2 4.2E-07 1.5E-11 93.6 3.9 82 1124-1217 116-198 (199)
43 2etx_A Mediator of DNA damage 98.1 5.2E-06 1.8E-10 85.5 7.7 89 1124-1218 112-203 (209)
44 2dun_A POL MU, DNA polymerase 98.1 4.8E-06 1.6E-10 82.6 6.7 88 1126-1216 9-106 (133)
45 1kzy_C Tumor suppressor P53-bi 98.0 4.9E-06 1.7E-10 89.0 5.9 87 1124-1215 152-250 (259)
46 2nte_A BARD-1, BRCA1-associate 97.9 4.9E-06 1.7E-10 85.1 3.3 84 1124-1212 101-209 (210)
47 1dgs_A DNA ligase; AMP complex 97.9 3.2E-06 1.1E-10 101.5 2.0 76 1125-1205 585-660 (667)
48 2owo_A DNA ligase; protein-DNA 97.8 5.1E-06 1.7E-10 99.8 2.2 76 1125-1204 595-670 (671)
49 3m9l_A Hydrolase, haloacid deh 97.3 0.00039 1.3E-08 67.9 7.2 86 955-1045 67-155 (205)
50 3sqd_A PAX-interacting protein 97.3 0.00048 1.6E-08 72.2 8.2 88 1123-1216 118-218 (219)
51 2wm8_A MDP-1, magnesium-depend 97.1 0.00058 2E-08 67.2 6.8 81 956-1046 66-149 (187)
52 3ib6_A Uncharacterized protein 97.0 0.00078 2.7E-08 66.6 6.7 83 957-1043 33-123 (189)
53 2fpr_A Histidine biosynthesis 97.0 0.0028 9.4E-08 62.7 10.2 113 900-1044 10-143 (176)
54 2vxb_A DNA repair protein RHP9 97.0 0.00052 1.8E-08 72.8 5.1 81 1123-1210 147-240 (241)
55 2pib_A Phosphorylated carbohyd 96.8 0.00087 3E-08 64.0 4.5 84 957-1045 83-168 (216)
56 3m1y_A Phosphoserine phosphata 96.8 0.00089 3.1E-08 65.2 4.6 88 957-1045 74-169 (217)
57 3kzx_A HAD-superfamily hydrola 96.8 0.0025 8.5E-08 62.8 7.7 85 956-1045 101-188 (231)
58 3t7k_A RTT107, regulator of TY 96.7 0.003 1E-07 68.5 8.4 100 1114-1217 6-119 (256)
59 3l8h_A Putative haloacid dehal 96.7 0.0021 7.3E-08 62.0 6.7 107 905-1045 2-129 (179)
60 2gmw_A D,D-heptose 1,7-bisphos 96.6 0.003 1E-07 63.8 7.2 67 902-997 23-105 (211)
61 2pr7_A Haloacid dehalogenase/e 96.6 0.00037 1.3E-08 63.4 0.4 84 959-1047 19-104 (137)
62 3kbb_A Phosphorylated carbohyd 96.6 0.0012 4E-08 64.8 3.6 84 957-1045 83-168 (216)
63 2p9j_A Hypothetical protein AQ 96.6 0.003 1E-07 60.4 6.3 103 904-1047 9-113 (162)
64 3al2_A DNA topoisomerase 2-bin 96.5 0.0016 5.3E-08 69.1 4.5 86 1125-1216 133-228 (235)
65 3um9_A Haloacid dehalogenase, 96.4 0.0016 5.5E-08 63.6 3.4 84 957-1045 95-180 (230)
66 3huf_A DNA repair and telomere 96.3 0.0031 1.1E-07 70.4 5.2 56 1149-1205 127-187 (325)
67 4gns_A Chitin biosynthesis pro 96.2 0.005 1.7E-07 63.9 6.0 97 1119-1217 153-254 (290)
68 1nnl_A L-3-phosphoserine phosp 96.1 0.0049 1.7E-07 61.0 5.0 49 957-1005 85-135 (225)
69 3dv9_A Beta-phosphoglucomutase 95.9 0.0056 1.9E-07 60.4 4.6 84 957-1045 107-193 (247)
70 4eze_A Haloacid dehalogenase-l 95.9 0.004 1.4E-07 67.9 3.8 88 957-1045 178-273 (317)
71 3nuq_A Protein SSM1, putative 95.7 0.0028 9.7E-08 65.2 1.7 84 957-1045 141-233 (282)
72 3zvl_A Bifunctional polynucleo 95.6 0.027 9.2E-07 63.6 9.2 111 902-1044 56-184 (416)
73 3skx_A Copper-exporting P-type 95.3 0.07 2.4E-06 54.0 10.1 44 958-1002 144-188 (280)
74 3iru_A Phoshonoacetaldehyde hy 95.2 0.019 6.5E-07 57.6 5.4 85 957-1045 110-197 (277)
75 2o2x_A Hypothetical protein; s 95.1 0.023 7.8E-07 57.2 5.8 64 903-995 30-109 (218)
76 3nvb_A Uncharacterized protein 94.8 0.021 7.1E-07 65.1 5.0 119 897-1047 215-341 (387)
77 2i7d_A 5'(3')-deoxyribonucleot 94.3 0.012 4.2E-07 57.9 1.4 39 957-995 72-112 (193)
78 2oda_A Hypothetical protein ps 94.2 0.024 8.3E-07 57.2 3.5 79 957-1045 35-116 (196)
79 1k1e_A Deoxy-D-mannose-octulos 94.2 0.075 2.6E-06 52.3 6.7 103 904-1047 8-112 (180)
80 2l42_A DNA-binding protein RAP 94.1 0.027 9.4E-07 53.9 3.3 85 1126-1218 10-96 (106)
81 3p96_A Phosphoserine phosphata 94.1 0.024 8.3E-07 63.1 3.3 90 957-1047 255-352 (415)
82 3e8m_A Acylneuraminate cytidyl 94.0 0.067 2.3E-06 51.1 5.8 103 904-1047 4-108 (164)
83 2r8e_A 3-deoxy-D-manno-octulos 93.2 0.15 5.1E-06 50.6 7.0 69 965-1047 60-130 (188)
84 2b0c_A Putative phosphatase; a 93.0 0.0034 1.2E-07 60.6 -5.0 86 956-1046 89-177 (206)
85 2i33_A Acid phosphatase; HAD s 92.8 0.097 3.3E-06 55.8 5.3 84 900-996 55-143 (258)
86 3n1u_A Hydrolase, HAD superfam 92.1 0.051 1.7E-06 54.6 1.9 68 966-1047 54-123 (191)
87 3mn1_A Probable YRBI family ph 92.0 0.15 5.1E-06 50.9 5.2 103 903-1046 18-122 (189)
88 3pct_A Class C acid phosphatas 91.8 0.16 5.4E-06 55.2 5.5 75 901-995 55-143 (260)
89 3ij5_A 3-deoxy-D-manno-octulos 91.7 0.1 3.4E-06 53.9 3.6 103 904-1047 49-153 (211)
90 3mmz_A Putative HAD family hyd 91.7 0.18 6.3E-06 49.7 5.4 65 966-1045 47-113 (176)
91 3ocu_A Lipoprotein E; hydrolas 91.6 0.16 5.6E-06 55.1 5.3 75 901-995 55-143 (262)
92 3s6j_A Hydrolase, haloacid deh 90.7 0.33 1.1E-05 47.2 6.0 86 957-1047 90-177 (233)
93 3e58_A Putative beta-phosphogl 90.2 0.38 1.3E-05 45.7 5.8 84 957-1045 88-173 (214)
94 3qnm_A Haloacid dehalogenase-l 89.8 0.34 1.2E-05 47.2 5.3 83 957-1044 106-189 (240)
95 3qbz_A DDK kinase regulatory s 89.5 0.51 1.8E-05 48.4 6.4 73 1125-1199 56-146 (160)
96 3n07_A 3-deoxy-D-manno-octulos 89.2 0.13 4.5E-06 52.3 1.9 68 966-1047 60-129 (195)
97 2hsz_A Novel predicted phospha 89.2 0.51 1.7E-05 47.7 6.2 84 957-1045 113-198 (243)
98 2nyv_A Pgpase, PGP, phosphogly 89.2 0.49 1.7E-05 47.1 6.0 84 957-1045 82-167 (222)
99 3ed5_A YFNB; APC60080, bacillu 89.1 0.41 1.4E-05 46.7 5.3 83 957-1044 102-186 (238)
100 2obb_A Hypothetical protein; s 89.1 0.48 1.6E-05 47.1 5.8 63 904-999 3-66 (142)
101 4ex6_A ALNB; modified rossman 88.9 0.45 1.6E-05 46.8 5.5 84 957-1045 103-188 (237)
102 3l41_A BRCT-containing protein 88.7 0.37 1.3E-05 50.8 4.9 84 1123-1209 109-207 (220)
103 1rku_A Homoserine kinase; phos 88.5 0.33 1.1E-05 47.3 4.1 88 957-1047 68-158 (206)
104 2hoq_A Putative HAD-hydrolase 88.5 0.32 1.1E-05 48.5 4.1 83 957-1044 93-177 (241)
105 2hdo_A Phosphoglycolate phosph 88.3 0.39 1.3E-05 46.6 4.5 86 957-1047 82-168 (209)
106 3umb_A Dehalogenase-like hydro 88.3 0.55 1.9E-05 45.9 5.6 84 957-1045 98-183 (233)
107 2b82_A APHA, class B acid phos 88.2 0.081 2.8E-06 54.1 -0.4 38 958-995 88-126 (211)
108 3bwv_A Putative 5'(3')-deoxyri 87.8 0.35 1.2E-05 46.9 3.8 27 957-983 68-94 (180)
109 4eek_A Beta-phosphoglucomutase 87.2 0.42 1.4E-05 48.1 4.1 86 957-1045 109-196 (259)
110 3oq0_A DBF4, protein DNA52; DD 87.2 0.83 2.8E-05 46.5 6.1 80 1125-1205 18-114 (151)
111 3mc1_A Predicted phosphatase, 86.9 0.35 1.2E-05 47.1 3.2 84 957-1045 85-170 (226)
112 1zrn_A L-2-haloacid dehalogena 86.7 0.62 2.1E-05 45.8 4.8 83 957-1044 94-178 (232)
113 2gfh_A Haloacid dehalogenase-l 86.5 0.44 1.5E-05 49.3 3.9 82 957-1043 120-202 (260)
114 1te2_A Putative phosphatase; s 86.1 1.1 3.7E-05 43.1 6.1 84 957-1045 93-178 (226)
115 3kd3_A Phosphoserine phosphohy 86.0 1.2 4E-05 42.6 6.3 88 958-1045 82-175 (219)
116 2hcf_A Hydrolase, haloacid deh 85.8 0.5 1.7E-05 46.1 3.7 85 957-1045 92-181 (234)
117 2no4_A (S)-2-haloacid dehaloge 85.8 0.67 2.3E-05 46.0 4.7 83 957-1044 104-188 (240)
118 2go7_A Hydrolase, haloacid deh 85.4 1.1 3.8E-05 42.1 5.7 84 957-1046 84-169 (207)
119 2ah5_A COG0546: predicted phos 85.4 0.58 2E-05 46.2 3.9 82 957-1045 83-165 (210)
120 3ddh_A Putative haloacid dehal 85.1 0.77 2.6E-05 44.2 4.6 78 957-1044 104-184 (234)
121 2hi0_A Putative phosphoglycola 84.9 1.2 4.2E-05 44.6 6.1 83 957-1045 109-193 (240)
122 3u26_A PF00702 domain protein; 84.8 0.49 1.7E-05 46.2 3.1 83 957-1044 99-182 (234)
123 1l6r_A Hypothetical protein TA 84.3 0.8 2.7E-05 47.0 4.5 57 905-998 6-63 (227)
124 3sd7_A Putative phosphatase; s 83.5 0.84 2.9E-05 45.2 4.2 84 957-1045 109-195 (240)
125 3kc2_A Uncharacterized protein 83.5 1.8 6.1E-05 48.4 7.2 56 902-995 11-71 (352)
126 1qq5_A Protein (L-2-haloacid d 83.4 0.89 3E-05 45.9 4.4 83 957-1045 92-175 (253)
127 2i6x_A Hydrolase, haloacid deh 82.8 0.34 1.2E-05 46.9 1.0 87 956-1047 87-180 (211)
128 1wr8_A Phosphoglycolate phosph 82.6 1.6 5.5E-05 44.3 5.9 57 905-998 4-61 (231)
129 3oq4_A DBF4, protein DNA52; DD 82.5 2 6.8E-05 43.0 6.3 54 1151-1204 35-96 (134)
130 3d6j_A Putative haloacid dehal 81.6 2.1 7.1E-05 41.1 6.0 84 957-1045 88-173 (225)
131 3umc_A Haloacid dehalogenase; 81.4 1 3.5E-05 44.6 3.9 82 957-1045 119-201 (254)
132 4dcc_A Putative haloacid dehal 81.3 0.59 2E-05 46.4 2.1 84 958-1045 112-201 (229)
133 1xvi_A MPGP, YEDP, putative ma 81.0 2.4 8E-05 44.5 6.6 59 903-998 8-67 (275)
134 1yns_A E-1 enzyme; hydrolase f 80.7 1.1 3.7E-05 46.8 3.9 83 957-1045 129-215 (261)
135 2pke_A Haloacid delahogenase-l 79.7 1.4 4.8E-05 44.2 4.2 78 957-1044 111-189 (251)
136 3smv_A S-(-)-azetidine-2-carbo 79.7 1.2 4.2E-05 43.1 3.7 81 957-1044 98-182 (240)
137 2om6_A Probable phosphoserine 79.5 1.4 4.6E-05 42.8 3.9 81 959-1044 100-185 (235)
138 3qxg_A Inorganic pyrophosphata 78.9 1.4 4.7E-05 43.9 3.9 84 957-1045 108-194 (243)
139 3cnh_A Hydrolase family protei 78.9 0.78 2.7E-05 44.1 2.0 86 957-1047 85-171 (200)
140 3mpo_A Predicted hydrolase of 78.8 2.4 8.1E-05 43.5 5.7 57 904-997 5-62 (279)
141 3umg_A Haloacid dehalogenase; 78.8 1.1 3.6E-05 44.1 3.0 82 957-1045 115-197 (254)
142 2w43_A Hypothetical 2-haloalka 78.7 0.96 3.3E-05 43.8 2.6 84 957-1047 73-156 (201)
143 1xpj_A Hypothetical protein; s 78.6 1.5 5.3E-05 41.4 3.9 63 905-998 2-77 (126)
144 2zg6_A Putative uncharacterize 77.7 3.4 0.00012 40.8 6.3 82 956-1045 93-175 (220)
145 3dnp_A Stress response protein 77.4 3.5 0.00012 42.5 6.5 57 904-997 6-63 (290)
146 4dw8_A Haloacid dehalogenase-l 77.0 2.3 8E-05 43.6 5.0 56 904-996 5-61 (279)
147 3pgv_A Haloacid dehalogenase-l 76.9 2.1 7E-05 44.7 4.7 60 901-997 18-78 (285)
148 2fea_A 2-hydroxy-3-keto-5-meth 76.7 2.5 8.7E-05 42.5 5.1 38 957-994 76-114 (236)
149 2fi1_A Hydrolase, haloacid deh 76.6 3.6 0.00012 39.0 5.8 80 959-1045 83-163 (190)
150 1nf2_A Phosphatase; structural 75.7 3.7 0.00013 42.6 6.1 57 905-998 3-59 (268)
151 1nrw_A Hypothetical protein, h 75.6 2.9 9.9E-05 43.7 5.3 56 905-997 5-61 (288)
152 1zjj_A Hypothetical protein PH 75.4 2.8 9.5E-05 43.2 5.1 15 905-919 2-16 (263)
153 3epr_A Hydrolase, haloacid deh 74.7 2.2 7.6E-05 43.8 4.1 16 904-919 5-20 (264)
154 3nas_A Beta-PGM, beta-phosphog 74.1 2.7 9.2E-05 41.1 4.4 80 959-1045 93-174 (233)
155 3qgm_A P-nitrophenyl phosphata 73.9 4.8 0.00016 41.0 6.4 16 904-919 8-23 (268)
156 2qlt_A (DL)-glycerol-3-phospha 72.9 5.5 0.00019 41.0 6.6 83 957-1045 113-205 (275)
157 1s2o_A SPP, sucrose-phosphatas 72.7 2.5 8.5E-05 43.5 3.9 34 963-996 24-57 (244)
158 3dao_A Putative phosphatse; st 71.6 3.1 0.00011 43.3 4.5 60 901-996 18-78 (283)
159 3fvv_A Uncharacterized protein 71.6 4.2 0.00014 40.1 5.2 48 958-1006 92-140 (232)
160 2fue_A PMM 1, PMMH-22, phospho 71.2 3.6 0.00012 42.7 4.7 17 903-919 12-28 (262)
161 2zos_A MPGP, mannosyl-3-phosph 71.0 7 0.00024 40.2 6.8 35 963-997 22-57 (249)
162 1vjr_A 4-nitrophenylphosphatas 71.0 6.1 0.00021 40.2 6.3 18 902-919 15-32 (271)
163 2pq0_A Hypothetical conserved 71.0 3.5 0.00012 42.0 4.5 15 905-919 4-18 (258)
164 1qyi_A ZR25, hypothetical prot 70.6 1.5 5.2E-05 49.7 1.9 52 957-1009 214-267 (384)
165 2amy_A PMM 2, phosphomannomuta 70.1 5.5 0.00019 40.7 5.7 18 902-919 4-21 (246)
166 3a1c_A Probable copper-exporti 69.2 10 0.00034 39.9 7.7 73 957-1045 162-235 (287)
167 3k1z_A Haloacid dehalogenase-l 69.0 2.4 8.3E-05 43.3 2.8 82 957-1044 105-188 (263)
168 1rkq_A Hypothetical protein YI 68.6 3.1 0.00011 43.5 3.7 16 904-919 5-20 (282)
169 2ho4_A Haloacid dehalogenase-l 67.8 4.5 0.00016 40.4 4.5 16 904-919 7-22 (259)
170 2hx1_A Predicted sugar phospha 66.7 8.5 0.00029 39.8 6.4 15 904-918 14-28 (284)
171 1l7m_A Phosphoserine phosphata 65.1 2.7 9.2E-05 40.1 2.2 46 957-1003 75-121 (211)
172 3pdw_A Uncharacterized hydrola 64.5 2.8 9.6E-05 42.8 2.3 48 1146-1201 184-232 (266)
173 2b30_A Pvivax hypothetical pro 63.5 7.3 0.00025 41.6 5.3 55 904-995 27-85 (301)
174 3n28_A Phosphoserine phosphata 63.2 3.4 0.00011 44.4 2.7 88 957-1045 177-272 (335)
175 2wf7_A Beta-PGM, beta-phosphog 62.5 6.7 0.00023 37.7 4.4 82 957-1045 90-173 (221)
176 2fdr_A Conserved hypothetical 61.5 3.7 0.00013 39.8 2.4 84 957-1045 86-171 (229)
177 3l5k_A Protein GS1, haloacid d 59.9 3.6 0.00012 41.0 2.1 84 957-1045 111-201 (250)
178 1yv9_A Hydrolase, haloacid deh 59.2 7.4 0.00025 39.6 4.2 16 904-919 5-20 (264)
179 3f9r_A Phosphomannomutase; try 59.1 8.2 0.00028 40.2 4.6 17 903-919 3-19 (246)
180 2x4d_A HLHPP, phospholysine ph 58.7 17 0.00057 36.2 6.6 16 904-919 12-27 (271)
181 2rbk_A Putative uncharacterize 58.6 2.3 8E-05 43.6 0.4 15 905-919 3-17 (261)
182 1rlm_A Phosphatase; HAD family 58.1 4.5 0.00015 41.9 2.5 15 905-919 4-18 (271)
183 4ap9_A Phosphoserine phosphata 57.5 3.5 0.00012 39.0 1.4 82 957-1046 78-162 (201)
184 3ewi_A N-acylneuraminate cytid 57.2 6.6 0.00023 39.2 3.4 101 903-1047 8-112 (168)
185 1l7m_A Phosphoserine phosphata 57.2 9 0.00031 36.5 4.2 17 903-919 4-20 (211)
186 2oyc_A PLP phosphatase, pyrido 56.3 15 0.0005 38.7 6.1 15 904-918 21-35 (306)
187 3r4c_A Hydrolase, haloacid deh 54.9 8 0.00028 39.4 3.7 15 904-918 12-26 (268)
188 1swv_A Phosphonoacetaldehyde h 54.2 11 0.00038 37.8 4.5 85 957-1045 102-189 (267)
189 3l7y_A Putative uncharacterize 53.8 5.2 0.00018 42.1 2.1 16 904-919 37-52 (304)
190 1q92_A 5(3)-deoxyribonucleotid 53.5 4.3 0.00015 40.0 1.4 39 957-995 74-114 (197)
191 4g9b_A Beta-PGM, beta-phosphog 53.1 8 0.00027 39.3 3.3 81 958-1045 95-177 (243)
192 3d6j_A Putative haloacid dehal 52.8 4.9 0.00017 38.5 1.6 16 904-919 6-21 (225)
193 3i28_A Epoxide hydrolase 2; ar 51.9 5.5 0.00019 43.4 2.0 82 957-1045 99-188 (555)
194 1u02_A Trehalose-6-phosphate p 51.6 6.9 0.00023 40.2 2.6 36 959-994 24-59 (239)
195 2hcf_A Hydrolase, haloacid deh 49.7 5.9 0.0002 38.5 1.7 16 904-919 4-19 (234)
196 2go7_A Hydrolase, haloacid deh 49.6 5.6 0.00019 37.3 1.4 15 905-919 5-19 (207)
197 2c4n_A Protein NAGD; nucleotid 49.6 5.9 0.0002 38.6 1.6 15 905-919 4-18 (250)
198 4gib_A Beta-phosphoglucomutase 49.1 6.8 0.00023 39.9 2.0 81 958-1045 116-198 (250)
199 3e58_A Putative beta-phosphogl 48.8 5.7 0.00019 37.6 1.3 16 904-919 5-20 (214)
200 2fi1_A Hydrolase, haloacid deh 48.1 5.4 0.00019 37.7 1.1 48 1145-1202 137-184 (190)
201 3vay_A HAD-superfamily hydrola 47.5 4.1 0.00014 39.6 0.1 78 957-1044 104-182 (230)
202 3fzq_A Putative hydrolase; YP_ 47.4 5.9 0.0002 40.2 1.3 17 904-920 5-21 (274)
203 2yj3_A Copper-transporting ATP 53.1 4 0.00014 42.8 0.0 74 956-1045 134-209 (263)
204 3gyg_A NTD biosynthesis operon 47.0 7.2 0.00025 40.5 1.9 17 903-919 21-37 (289)
205 2hdo_A Phosphoglycolate phosph 46.0 6.7 0.00023 37.9 1.3 15 905-919 5-19 (209)
206 2p11_A Hypothetical protein; p 45.9 13 0.00043 37.1 3.4 77 957-1045 95-172 (231)
207 1te2_A Putative phosphatase; s 45.7 6.2 0.00021 37.8 1.1 16 904-919 9-24 (226)
208 2p11_A Hypothetical protein; p 45.7 7.1 0.00024 39.0 1.5 17 903-919 10-26 (231)
209 2ah5_A COG0546: predicted phos 45.6 7.5 0.00026 38.2 1.7 46 1145-1198 137-182 (210)
210 2fdr_A Conserved hypothetical 45.4 6.8 0.00023 38.0 1.3 15 905-919 5-19 (229)
211 2wf7_A Beta-PGM, beta-phosphog 45.2 5.7 0.00019 38.2 0.7 15 905-919 3-17 (221)
212 2w43_A Hypothetical 2-haloalka 45.2 7.2 0.00025 37.6 1.4 14 906-919 3-16 (201)
213 3ddh_A Putative haloacid dehal 45.2 6.4 0.00022 37.8 1.1 16 904-919 8-23 (234)
214 3mc1_A Predicted phosphatase, 44.9 6.6 0.00023 38.1 1.1 16 904-919 4-19 (226)
215 2i6x_A Hydrolase, haloacid deh 44.4 7.2 0.00025 37.6 1.3 16 904-919 5-20 (211)
216 3kd3_A Phosphoserine phosphohy 44.4 8.1 0.00028 36.8 1.6 16 904-919 4-19 (219)
217 4ex6_A ALNB; modified rossman 44.1 8.3 0.00028 37.8 1.7 18 902-919 17-34 (237)
218 3s6j_A Hydrolase, haloacid deh 43.9 8.4 0.00029 37.3 1.7 16 904-919 6-21 (233)
219 3ed5_A YFNB; APC60080, bacillu 43.8 7.1 0.00024 37.9 1.2 16 904-919 7-22 (238)
220 1zrn_A L-2-haloacid dehalogena 43.7 7.7 0.00026 38.0 1.4 15 905-919 5-19 (232)
221 2pke_A Haloacid delahogenase-l 43.6 7 0.00024 39.1 1.1 16 904-919 13-28 (251)
222 3nas_A Beta-PGM, beta-phosphog 43.4 6.7 0.00023 38.3 0.9 15 905-919 3-17 (233)
223 2om6_A Probable phosphoserine 43.4 6.7 0.00023 37.9 0.9 15 905-919 5-19 (235)
224 3cnh_A Hydrolase family protei 43.1 7.9 0.00027 37.1 1.4 16 904-919 4-19 (200)
225 1ltq_A Polynucleotide kinase; 42.7 9.5 0.00033 40.0 2.0 123 904-1056 159-292 (301)
226 3fvv_A Uncharacterized protein 42.3 8.5 0.00029 37.9 1.5 16 904-919 4-19 (232)
227 3umc_A Haloacid dehalogenase; 41.5 8.8 0.0003 37.9 1.4 17 903-919 21-37 (254)
228 3smv_A S-(-)-azetidine-2-carbo 41.4 7.2 0.00025 37.7 0.8 16 904-919 6-21 (240)
229 3zx4_A MPGP, mannosyl-3-phosph 41.4 8.1 0.00028 39.6 1.2 14 906-919 2-15 (259)
230 3vay_A HAD-superfamily hydrola 41.4 8 0.00027 37.6 1.1 15 905-919 3-17 (230)
231 3umb_A Dehalogenase-like hydro 41.0 10 0.00035 36.9 1.8 16 904-919 4-19 (233)
232 4eek_A Beta-phosphoglucomutase 40.6 11 0.00038 37.7 2.0 17 903-919 27-43 (259)
233 1swv_A Phosphonoacetaldehyde h 40.2 9 0.00031 38.4 1.3 16 904-919 6-21 (267)
234 2hsz_A Novel predicted phospha 40.1 10 0.00035 38.2 1.7 16 904-919 23-38 (243)
235 2hi0_A Putative phosphoglycola 39.9 9.3 0.00032 38.2 1.3 46 1145-1198 165-210 (240)
236 3l5k_A Protein GS1, haloacid d 39.7 9.7 0.00033 37.9 1.4 18 902-919 28-45 (250)
237 3umg_A Haloacid dehalogenase; 39.7 8.2 0.00028 37.8 0.9 17 903-919 14-30 (254)
238 3u26_A PF00702 domain protein; 39.5 8.6 0.00029 37.4 1.0 15 905-919 3-17 (234)
239 3sd7_A Putative phosphatase; s 39.2 11 0.00036 37.3 1.6 16 904-919 29-44 (240)
240 2zg6_A Putative uncharacterize 38.9 11 0.00037 37.2 1.6 16 904-919 3-18 (220)
241 2hoq_A Putative HAD-hydrolase 38.9 8.6 0.0003 38.2 0.9 15 905-919 3-17 (241)
242 2no4_A (S)-2-haloacid dehaloge 38.7 10 0.00034 37.6 1.4 16 904-919 14-29 (240)
243 3qnm_A Haloacid dehalogenase-l 38.2 9.5 0.00033 37.0 1.1 16 904-919 5-20 (240)
244 2qlt_A (DL)-glycerol-3-phospha 37.8 10 0.00035 39.0 1.3 15 905-919 36-50 (275)
245 3qxg_A Inorganic pyrophosphata 37.4 11 0.00037 37.4 1.4 17 903-919 23-39 (243)
246 4gib_A Beta-phosphoglucomutase 37.0 10 0.00034 38.6 1.1 15 905-919 27-41 (250)
247 1q92_A 5(3)-deoxyribonucleotid 36.0 9.4 0.00032 37.6 0.6 17 903-919 3-19 (197)
248 4fe3_A Cytosolic 5'-nucleotida 35.6 22 0.00076 37.5 3.5 40 956-995 139-179 (297)
249 2nyv_A Pgpase, PGP, phosphogly 34.9 13 0.00043 36.9 1.4 15 905-919 4-18 (222)
250 4dcc_A Putative haloacid dehal 34.1 14 0.00049 36.4 1.6 17 903-919 27-43 (229)
251 3t7k_A RTT107, regulator of TY 33.9 37 0.0013 37.3 4.8 81 1121-1206 129-239 (256)
252 1qq5_A Protein (L-2-haloacid d 33.3 13 0.00043 37.5 1.1 15 905-919 3-17 (253)
253 2gfh_A Haloacid dehalogenase-l 32.6 12 0.00042 38.5 0.9 20 900-919 14-33 (260)
254 3k1z_A Haloacid dehalogenase-l 30.7 16 0.00055 37.2 1.4 15 905-919 2-16 (263)
255 4gxt_A A conserved functionall 29.6 38 0.0013 38.3 4.3 50 957-1006 220-275 (385)
256 1y8a_A Hypothetical protein AF 29.2 16 0.00055 39.3 1.1 14 905-918 22-35 (332)
257 4g9b_A Beta-PGM, beta-phosphog 29.2 16 0.00056 37.0 1.1 15 905-919 6-20 (243)
258 1rku_A Homoserine kinase; phos 27.9 20 0.00069 34.6 1.5 13 905-917 3-15 (206)
259 2fea_A 2-hydroxy-3-keto-5-meth 27.8 20 0.00068 36.0 1.4 15 904-918 6-20 (236)
260 1yns_A E-1 enzyme; hydrolase f 24.9 20 0.00069 37.2 0.9 16 904-919 10-25 (261)
261 2jc9_A Cytosolic purine 5'-nuc 23.0 55 0.0019 39.3 4.1 42 954-995 242-284 (555)
262 4ap9_A Phosphoserine phosphata 21.6 14 0.00048 34.9 -1.0 16 904-919 9-24 (201)
263 2g80_A Protein UTR4; YEL038W, 21.6 26 0.0009 36.8 1.0 14 905-918 32-45 (253)
No 1
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.1e-63 Score=563.08 Aligned_cols=313 Identities=33% Similarity=0.544 Sum_probs=260.5
Q ss_pred HhHHHHHhhHH--hhhhhcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCC------cceeeeec-----
Q 000938 885 IQKERTRRLEE--QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP------HRHLFRFP----- 951 (1218)
Q Consensus 885 I~ke~akrL~~--q~rLLs~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P------~~~lF~~~----- 951 (1218)
++.++|.++.. +++|+..+||+||||||||||||+. +|...+|... +..| +...|.++
T Consensus 5 vs~~~a~~~~~~~~~rll~~~Kl~LVLDLDeTLiHs~~----~~~~~~~~~~-----~~~~~~~~~~dv~~F~l~~~~~~ 75 (442)
T 3ef1_A 5 VSLEEASRLESENVKRLRQEKRLSLIVXLDQTIIHATV----DPTVGEWMSD-----PGNVNYDVLRDVRSFNLQEGPSG 75 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEECCBTTTEEEEC----CTHHHHHHTC-----TTSTTTGGGTTCEEEEEEETTTT
T ss_pred ecHHHHHHHHHHHHHHHHhcCCeEEEEeeccceecccc----ccccchhccC-----CCCcchhhhccccceeeeeccCC
Confidence 45567777766 5789999999999999999999984 5655555431 1122 13456653
Q ss_pred -cceEEEEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccc
Q 000938 952 -HMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 1030 (1218)
Q Consensus 952 -~~~~YVKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrV 1030 (1218)
.+.|||++|||+++||++|+++|||+|||++.+.||++|+++|||.+.||.+|+|+|++|+. .++|||+++
T Consensus 76 ~~~~~~V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~--------~~~KdL~~l 147 (442)
T 3ef1_A 76 YTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS--------LAQKSLRRL 147 (442)
T ss_dssp EEEEEEEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSC--------SSCCCGGGT
T ss_pred ceeEEEEEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCC--------ceeeehHHh
Confidence 25799999999999999999999999999999999999999999999999999999987742 478999988
Q ss_pred cCCC-CcEEEEeCCCCccccCcCCcccccccccccCccc---------c-----cCC-C--CCCcc--------------
Q 000938 1031 LGME-SAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR---------Q-----FGL-L--GPSLL-------------- 1078 (1218)
Q Consensus 1031 LGRD-srVVIVDDspdVW~~qpdN~I~IkPY~yF~~s~~---------q-----~Gl-p--gPSl~-------------- 1078 (1218)
|||+ ++||||||++.+|..|| |+|+|+||+||.+..+ + +++ + .|+..
T Consensus 148 l~rdl~~vvIIDd~p~~~~~~p-N~I~I~~~~fF~~~gD~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (442)
T 3ef1_A 148 FPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYEFFVGIGDINSNFLAKSTPLPEQEQLIPLEIPKDEPDSVDEINEENEET 226 (442)
T ss_dssp CSSCCTTEEEEESCSGGGTTCT-TEEECCCCCCSTTCCCSCC--------------------------------------
T ss_pred cCCCcceEEEEECCHHHhCCCC-CEEEcCCccccCCCCcccccccccccccccccccccccccccccccccccccccccC
Confidence 9999 99999999999999997 9999999999997521 1 222 1 11000
Q ss_pred ---------------------------------------------c--------------ccccC----------CCcch
Q 000938 1079 ---------------------------------------------E--------------IDHDE----------RSEDG 1089 (1218)
Q Consensus 1079 ---------------------------------------------E--------------i~~DE----------dpeD~ 1089 (1218)
| .+.|+ ...|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~rpl~~~q~~l~~~~~~~~~~~~~l~d~D~ 306 (442)
T 3ef1_A 227 PEYDSSNSSYAQDSSTIPEKTLLKDTFLQNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDH 306 (442)
T ss_dssp --------------------------------CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTSCCSCHHHHCSCCCCCC
T ss_pred cccccccccccccccccchhhhhccccCccchhhHHHHHHhhhhhhhhhccCchhhHHHHhhhhhhccccccccccCCcH
Confidence 0 00011 23589
Q ss_pred hhHhHHHHHHHHHhhccccCC--------CCchhhHHHHHHHhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCE
Q 000938 1090 TLASSLGVIERLHKIFFSHQS--------LDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAV 1161 (1218)
Q Consensus 1090 eLlsLLpfLe~IHq~FFs~~~--------L~~~DVR~IL~eiRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAt 1161 (1218)
+|..|+.+|.+||++||..++ ...+||+.||+++|+++|+||+|||||++|.+. ++.+..+|++|+.|||+
T Consensus 307 ~L~~l~~~L~~iH~~fy~~~d~~~~~~~~~~~~Dv~~il~~~k~~~L~G~~IvfSG~~p~~~-~~~r~~l~~~~~~lGa~ 385 (442)
T 3ef1_A 307 ELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGV-DVLSSDIAKWAMSFGAE 385 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSCCSSSCCCCHHHHHHHHHHTTSTTCEEEEESSSCTTS-CSTTSHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHHhhcccCCcEEEEecccCCCC-CccHHHHHHHHHHcCCE
Confidence 999999999999999998753 235799999999999999999999999999864 46678999999999999
Q ss_pred EecccCCCccEEEeCCCCCHHHHHHHHc-CCcEEcHHHHHHHHHhcccCCCCCCCC
Q 000938 1162 CTKHIDDQVTHVVANSLGTDKVNWALST-GRFVVHPGWVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1162 VssdVd~kVTHLVAss~gTeKVk~Alk~-GIkIVSPdWLedCl~~wkRVDEsdYlL 1216 (1218)
|..+|+++||||||...+|.||++|+++ ||+||+++||++|+..|+|+||..|+|
T Consensus 386 ~~~~vs~~vTHLVa~~~~t~K~~~A~~~g~IkIVs~~WL~dcl~~~krldE~~YlL 441 (442)
T 3ef1_A 386 VVLDFSVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 441 (442)
T ss_dssp ECSSSSSCCSEEEECSCCCHHHHHHHHHSSSEEEEHHHHHHHHHHTSCCCGGGTBC
T ss_pred EeCCCCCCceEEEeCCCCCHHHHHHHhcCCCEEEeHHHHHHHHHcCCcCChhcccc
Confidence 9999999999999999999999999998 599999999999999999999999987
No 2
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-60 Score=531.13 Aligned_cols=308 Identities=32% Similarity=0.548 Sum_probs=253.8
Q ss_pred HhhhhhcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhccccc-CCCcceeeeec------cceEEEEecCCHHHHH
Q 000938 895 EQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDR-EKPHRHLFRFP------HMGMWTKLRPGIWTFL 967 (1218)
Q Consensus 895 ~q~rLLs~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~-~~P~~~lF~~~------~~~~YVKlRPGLdEFL 967 (1218)
.+++|+..+|++||||||||||||+. +|...+|......... ..-....|.++ .+.+||++|||+++||
T Consensus 9 ~~~rl~~~~k~~LVlDLD~TLvhS~~----~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL 84 (372)
T 3ef0_A 9 NVKRLRQEKRLSLIVDLDQTIIHATV----DPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFL 84 (372)
T ss_dssp HHHHHHHHTCEEEEECCBTTTEEEEC----CTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHH
T ss_pred HHHHHHhCCCCEEEEcCCCCcccccC----cCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHH
Confidence 35778999999999999999999974 5554445321100000 00012345553 3578999999999999
Q ss_pred HHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCc
Q 000938 968 ERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRV 1046 (1218)
Q Consensus 968 eeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdV 1046 (1218)
++|+++|||+|||++.+.||++|++.|||.+.||.+|+|+|++|+. .|+|||++++|++ ++||||||++.+
T Consensus 85 ~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~--------~~~KdL~~L~~~dl~~viiiDd~~~~ 156 (372)
T 3ef0_A 85 QKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS--------LAQKSLRRLFPCDTSMVVVIDDRGDV 156 (372)
T ss_dssp HHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC--------SSCCCGGGTCSSCCTTEEEEESCSGG
T ss_pred HHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC--------cceecHHHhcCCCCceEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999987642 4789999888998 999999999999
Q ss_pred cccCcCCcccccccccccCcccccC--CCCC--Cccc------------------------ccccC----------CCcc
Q 000938 1047 WPHNKLNLIVVERYTYFPCSRRQFG--LLGP--SLLE------------------------IDHDE----------RSED 1088 (1218)
Q Consensus 1047 W~~qpdN~I~IkPY~yF~~s~~q~G--lpgP--Sl~E------------------------i~~DE----------dpeD 1088 (1218)
|..|| |+|+|+||+||.+..+.+. +|.. ++.+ ++.|| ...|
T Consensus 157 ~~~~p-N~I~i~~~~~f~~~~d~n~~~lp~~~~~~~~~~~~~~~~~~~q~~~~p~~~~q~~l~~~e~~~~~~~~~~~d~D 235 (372)
T 3ef0_A 157 WDWNP-NLIKVVPYEFFVGIGDINSNFLSGNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRD 235 (372)
T ss_dssp GTTCT-TEEECCCCCCSTTCCCTTC--------CCGGGGHHHHHHHHHHHHHCHHHHHHHHHHHSCCSCSGGGCSCCCCC
T ss_pred cCCCC-cEeeeCCccccCCcCccccccccccchhHHHhhhhhhhhhhhhhcccchhHHHHhhhccccccchhhccccCCh
Confidence 99997 9999999999997654322 2221 1110 01121 2358
Q ss_pred hhhHhHHHHHHHHHhhccccC--------CCCchhhHHHHHHHhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCC
Q 000938 1089 GTLASSLGVIERLHKIFFSHQ--------SLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGA 1160 (1218)
Q Consensus 1089 ~eLlsLLpfLe~IHq~FFs~~--------~L~~~DVR~IL~eiRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGA 1160 (1218)
++|..++.+|++||++||..+ ....+||+.||.++|+++|+||+|||||++|.+. .+++..++++++.+||
T Consensus 236 ~~L~~~~~~L~~iH~~Ff~~~~~~~~~~~~~~~~dv~~ii~~lk~~~L~G~~ivfSG~~~~~~-~~~~~~l~~l~~~lGa 314 (372)
T 3ef0_A 236 HELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGV-DVLSSDIAKWAMSFGA 314 (372)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHTTTSTTCEEEEESSSCTTS-CTTTSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHhhhcCCcEEEEecccCCCc-chhHHHHHHHHHHcCC
Confidence 999999999999999999973 2345899999999999999999999999998753 4567899999999999
Q ss_pred EEecccCCCccEEEeCCCCCHHHHHHHHc-CCcEEcHHHHHHHHHhcccCCCCCCCC
Q 000938 1161 VCTKHIDDQVTHVVANSLGTDKVNWALST-GRFVVHPGWVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1161 tVssdVd~kVTHLVAss~gTeKVk~Alk~-GIkIVSPdWLedCl~~wkRVDEsdYlL 1216 (1218)
+|+.+++++||||||...+|.|+++|+++ ||+||+++||++|+..|+++||..|+|
T Consensus 315 ~v~~~vs~~vTHLVa~~~~t~K~~~A~~~~~I~IV~~~Wl~~c~~~~~~vdE~~Y~l 371 (372)
T 3ef0_A 315 EVVLDFSVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 371 (372)
T ss_dssp EEESSSSSCCSEEEECSCCCHHHHHHHHSSSCCEEEHHHHHHHHHTTSCCCGGGGBC
T ss_pred EEeCcCCCCceEEEEcCCCchHHHHHHhcCCCEEEcHHHHHHHHHhCCcCChhhcee
Confidence 99999999999999999999999999998 799999999999999999999999987
No 3
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=100.00 E-value=1.3e-33 Score=293.10 Aligned_cols=159 Identities=28% Similarity=0.358 Sum_probs=137.0
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhccceEEEEc
Q 000938 901 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYT 980 (1218)
Q Consensus 901 s~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk~YEIVIFT 980 (1218)
..+|+||||||||||||+.+. + ..++||++|||+++||++|+++|||+|||
T Consensus 31 ~~~~~tLVLDLDeTLvh~~~~----~-------------------------~~~~~v~~RPgl~eFL~~l~~~yeivI~T 81 (204)
T 3qle_A 31 YQRPLTLVITLEDFLVHSEWS----Q-------------------------KHGWRTAKRPGADYFLGYLSQYYEIVLFS 81 (204)
T ss_dssp -CCSEEEEEECBTTTEEEEEE----T-------------------------TTEEEEEECTTHHHHHHHHTTTEEEEEEC
T ss_pred cCCCeEEEEeccccEEeeecc----c-------------------------cCceeEEeCCCHHHHHHHHHhCCEEEEEc
Confidence 478999999999999999741 1 13578999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCccccCcCCcccccc
Q 000938 981 MGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVVER 1059 (1218)
Q Consensus 981 AGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdVW~~qpdN~I~IkP 1059 (1218)
++.+.||++|++.|||.+.+|.+|++ |++|. ...| .|+|||+ .+|++ ++||||||++.+|..||+|+|+|++
T Consensus 82 as~~~ya~~vl~~LDp~~~~f~~rl~-R~~c~-~~~g----~y~KdL~-~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~ 154 (204)
T 3qle_A 82 SNYMMYSDKIAEKLDPIHAFVSYNLF-KEHCV-YKDG----VHIKDLS-KLNRDLSKVIIIDTDPNSYKLQPENAIPMEP 154 (204)
T ss_dssp SSCHHHHHHHHHHTSTTCSSEEEEEC-GGGSE-EETT----EEECCGG-GSCSCGGGEEEEESCTTTTTTCGGGEEECCC
T ss_pred CCcHHHHHHHHHHhCCCCCeEEEEEE-eccee-EECC----eeeecHH-HhCCChHHEEEEECCHHHHhhCccCceEeee
Confidence 99999999999999999889999887 56564 3444 6899999 57998 9999999999999999999999999
Q ss_pred cccccCcccccCCCCCCcccccccCCCcchhhHhHHHHHHHHHhhccccCCCCchhhHHHHHHHhh
Q 000938 1060 YTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQR 1125 (1218)
Q Consensus 1060 Y~yF~~s~~q~GlpgPSl~Ei~~DEdpeD~eLlsLLpfLe~IHq~FFs~~~L~~~DVR~IL~eiRr 1125 (1218)
|.. + .|.+|..|++||+.|+.. ...|||.+|+.++.
T Consensus 155 ~~~----------------------~-~D~eL~~L~~~L~~L~~~-------~~~DVR~~L~~~~~ 190 (204)
T 3qle_A 155 WNG----------------------E-ADDKLVRLIPFLEYLATQ-------QTKDVRPILNSFED 190 (204)
T ss_dssp CCS----------------------S-CCCHHHHHHHHHHHHHHT-------CCSCSHHHHTTSSC
T ss_pred ECC----------------------C-CChhHHHHHHHHHHHhhc-------ChHHHHHHHHHhcC
Confidence 951 2 356899999999999852 26899999987764
No 4
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.97 E-value=1.3e-30 Score=262.81 Aligned_cols=167 Identities=29% Similarity=0.370 Sum_probs=137.3
Q ss_pred hcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeec--cceEEEEecCCHHHHHHHHhccceEE
Q 000938 900 FSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFP--HMGMWTKLRPGIWTFLERASKLFEMH 977 (1218)
Q Consensus 900 Ls~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~--~~~~YVKlRPGLdEFLeeLSk~YEIV 977 (1218)
...+|+||||||||||||+....... .+ +...+.+. ...+|+++|||+++||++++++|||+
T Consensus 11 ~~~~k~~LVLDLD~TLvhs~~~~~~~--~d--------------~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~ 74 (181)
T 2ght_A 11 QDSDKICVVINLDETLVHSSFKPVNN--AD--------------FIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECV 74 (181)
T ss_dssp GGTTSCEEEECCBTTTEEEESSCCSS--CS--------------EEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEE
T ss_pred ccCCCeEEEECCCCCeECCcccCCCC--cc--------------ceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEE
Confidence 34789999999999999997522100 00 01111222 24578999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCccccCcCCccc
Q 000938 978 LYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIV 1056 (1218)
Q Consensus 978 IFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdVW~~qpdN~I~ 1056 (1218)
|||++.+.||++|++.|||.+ +|.+|++ |++|.. .+| .++|+|+ .+|++ +++|||||++..|..++.|+|+
T Consensus 75 I~T~~~~~~a~~vl~~ld~~~-~f~~~~~-rd~~~~-~k~----~~~k~L~-~Lg~~~~~~vivdDs~~~~~~~~~ngi~ 146 (181)
T 2ght_A 75 LFTASLAKYADPVADLLDKWG-AFRARLF-RESCVF-HRG----NYVKDLS-RLGRDLRRVLILDNSPASYVFHPDNAVP 146 (181)
T ss_dssp EECSSCHHHHHHHHHHHCTTC-CEEEEEC-GGGSEE-ETT----EEECCGG-GTCSCGGGEEEECSCGGGGTTCTTSBCC
T ss_pred EEcCCCHHHHHHHHHHHCCCC-cEEEEEe-ccCcee-cCC----cEeccHH-HhCCCcceEEEEeCCHHHhccCcCCEeE
Confidence 999999999999999999998 8999877 665642 233 6899999 57998 9999999999999999999999
Q ss_pred ccccccccCcccccCCCCCCcccccccCCCcchhhHhHHHHHHHHHhhccccCCCCchhhHHHHH
Q 000938 1057 VERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILA 1121 (1218)
Q Consensus 1057 IkPY~yF~~s~~q~GlpgPSl~Ei~~DEdpeD~eLlsLLpfLe~IHq~FFs~~~L~~~DVR~IL~ 1121 (1218)
|.+|.. +++|.+|..|++||+.|+. ..|||.+|+
T Consensus 147 i~~~~~----------------------~~~D~eL~~l~~~L~~l~~---------~~DVr~~l~ 180 (181)
T 2ght_A 147 VASWFD----------------------NMSDTELHDLLPFFEQLSR---------VDDVYSVLR 180 (181)
T ss_dssp CCCCSS----------------------CTTCCHHHHHHHHHHHHTT---------CSCTHHHHC
T ss_pred eccccC----------------------CCChHHHHHHHHHHHHhCc---------CccHHHHhh
Confidence 999962 4678999999999999985 789999986
No 5
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=99.96 E-value=1.3e-30 Score=286.23 Aligned_cols=164 Identities=18% Similarity=0.189 Sum_probs=134.1
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhccceEEEEc
Q 000938 901 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYT 980 (1218)
Q Consensus 901 s~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk~YEIVIFT 980 (1218)
..+|+||||||||||||+.. +. .++|+++||||++||++|+++|||+|||
T Consensus 137 ~~~k~tLVLDLDeTLvh~~~-----~~-------------------------~~~~~~~RP~l~eFL~~l~~~yeivIfT 186 (320)
T 3shq_A 137 REGKKLLVLDIDYTLFDHRS-----PA-------------------------ETGTELMRPYLHEFLTSAYEDYDIVIWS 186 (320)
T ss_dssp CTTCEEEEECCBTTTBCSSS-----CC-------------------------SSHHHHBCTTHHHHHHHHHHHEEEEEEC
T ss_pred cCCCcEEEEeccccEEcccc-----cC-------------------------CCcceEeCCCHHHHHHHHHhCCEEEEEc
Confidence 46899999999999999963 10 1246889999999999999999999999
Q ss_pred CCcHHHHHHHHHHHcCCCce-eeeeeeecCCCCCCCC-CCCC-CCccccccccc----CCC-CcEEEEeCCCCccccCcC
Q 000938 981 MGNKLYATEMAKVLDPKGVL-FAGRVISRGDDGDPFD-GDER-VPKSKDLEGVL----GME-SAVVIIDDSVRVWPHNKL 1052 (1218)
Q Consensus 981 AGtreYAd~VLdiLDP~g~L-F~~RIySRDdc~~~~d-G~Er-~~yiKDLsrVL----GRD-srVVIVDDspdVW~~qpd 1052 (1218)
++.+.||++|++.|||.+.+ |.+|+| |++|+.+.. +... ..|+|||++++ |++ ++||||||++.+|..||+
T Consensus 187 as~~~ya~~vld~Ld~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~ 265 (320)
T 3shq_A 187 ATSMRWIEEKMRLLGVASNDNYKVMFY-LDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPK 265 (320)
T ss_dssp SSCHHHHHHHHHHTTCTTCSSCCCCEE-ECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGG
T ss_pred CCcHHHHHHHHHHhCCCCCcceeEEEE-EcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcC
Confidence 99999999999999999875 788888 455542210 0011 14899999643 888 999999999999999999
Q ss_pred CcccccccccccCcccccCCCCCCcccccccCCCcchhhHhHHHHHHHHH-hhccccCCCCchhhHHHHHH
Q 000938 1053 NLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLH-KIFFSHQSLDDVDVRNILAA 1122 (1218)
Q Consensus 1053 N~I~IkPY~yF~~s~~q~GlpgPSl~Ei~~DEdpeD~eLlsLLpfLe~IH-q~FFs~~~L~~~DVR~IL~e 1122 (1218)
|+|+|.+|.+... ++++|.+|..|++||+.|+ . ..|||.++++
T Consensus 266 NgI~I~~~~~~~~------------------~~~~D~eL~~L~~~L~~L~~~---------~~DVr~~~~~ 309 (320)
T 3shq_A 266 SGLKIRPFRQAHL------------------NRGTDTELLKLSDYLRKIAHH---------CPDFNSLNHR 309 (320)
T ss_dssp GEEECCCCCCHHH------------------HTTTCCHHHHHHHHHHHHHHH---------CSCGGGCCGG
T ss_pred ceEEeCeEcCCCC------------------CCCccHHHHHHHHHHHHHhcc---------CcchhHHHHH
Confidence 9999999963210 1467999999999999999 5 6899999864
No 6
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=244.53 Aligned_cols=157 Identities=31% Similarity=0.414 Sum_probs=128.7
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeec--cceEEEEecCCHHHHHHHHhccceEEE
Q 000938 901 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFP--HMGMWTKLRPGIWTFLERASKLFEMHL 978 (1218)
Q Consensus 901 s~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~--~~~~YVKlRPGLdEFLeeLSk~YEIVI 978 (1218)
..+|+||||||||||||+.+. |... .| +...+.+. ...+|+++|||+++||++++++|||+|
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~----~~~~--------~d----~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I 88 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFK----PISN--------AD----FIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVL 88 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESS----CCTT--------CS----EEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEE
T ss_pred cCCCeEEEEccccceEccccc----CCCC--------cc----ceeeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEE
Confidence 468999999999999999752 2100 00 00111122 245889999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCccccCcCCcccc
Q 000938 979 YTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVV 1057 (1218)
Q Consensus 979 FTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdVW~~qpdN~I~I 1057 (1218)
||++.+.||+.|++.|||.+ +|..|++ |++|.. .+| .|+|+|+ .+|++ +++|||||++..|..++.|+|+|
T Consensus 89 ~Tss~~~~a~~vl~~ld~~~-~f~~~l~-rd~~~~-~k~----~~lK~L~-~Lg~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 89 FTASLAKYADPVADLLDRWG-VFRARLF-RESCVF-HRG----NYVKDLS-RLGRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp ECSSCHHHHHHHHHHHCCSS-CEEEEEC-GGGCEE-ETT----EEECCGG-GSSSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred EcCCCHHHHHHHHHHhCCcc-cEEEEEE-ccccee-cCC----ceeeeHh-HhCCChhHEEEEECCHHHhhhCccCccEE
Confidence 99999999999999999997 8998776 666643 233 7899998 58998 99999999999999999999999
Q ss_pred cccccccCcccccCCCCCCcccccccCCCcchhhHhHHHHHHHHHh
Q 000938 1058 ERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHK 1103 (1218)
Q Consensus 1058 kPY~yF~~s~~q~GlpgPSl~Ei~~DEdpeD~eLlsLLpfLe~IHq 1103 (1218)
.+|.. +++|.+|..|++||+.|+.
T Consensus 161 ~~~~~----------------------~~~D~eL~~L~~~L~~l~~ 184 (195)
T 2hhl_A 161 QSWFD----------------------DMTDTELLDLIPFFEGLSR 184 (195)
T ss_dssp CCCSS----------------------CTTCCHHHHHHHHHHHHHC
T ss_pred eeecC----------------------CCChHHHHHHHHHHHHHHh
Confidence 99962 4679999999999999985
No 7
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=99.74 E-value=2.6e-18 Score=160.09 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=80.8
Q ss_pred HhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEe---CCCCCHHHHHHHHcCCcEEcHHHH
Q 000938 1123 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVA---NSLGTDKVNWALSTGRFVVHPGWV 1199 (1218)
Q Consensus 1123 iRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVA---ss~gTeKVk~Alk~GIkIVSPdWL 1199 (1218)
...++|+||+|||+|+++. .+..++++++.+||+|..+++++|||||| ....+.|+++|+++||+||+++||
T Consensus 11 ~~~~~l~g~~i~isg~~~~-----~r~~l~~li~~~Gg~v~~~~s~~~THlI~~~~~~~~~~K~~~A~~~gi~IV~~~Wl 85 (107)
T 3l3e_A 11 EAPKPLHKVVVCVSKKLSK-----KQSELNGIAASLGADYRRSFDETVTHFIYQGRPNDTNREYKSVKERGVHIVSEHWL 85 (107)
T ss_dssp ---CTTTTCEEEECGGGGG-----GHHHHHHHHHHTTCEEESSCCTTCCEEECCCCTTCCCHHHHHHHHTTCEEECHHHH
T ss_pred cccCCCCCeEEEEeCCChH-----hHHHHHHHHHHcCCEEeccccCCceEEEecCCCCCCCHHHHHHHHCCCeEecHHHH
Confidence 4567999999999999862 46789999999999999999999999999 445689999999999999999999
Q ss_pred HHHHHhcccCCCCCCCCC
Q 000938 1200 EASALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1200 edCl~~wkRVDEsdYlL~ 1217 (1218)
++|+..|+++||.+|++.
T Consensus 86 ~~c~~~~~~l~e~~Y~~~ 103 (107)
T 3l3e_A 86 LDCAQECKHLPESLYPHT 103 (107)
T ss_dssp HHHHHHTSCCCGGGCCTT
T ss_pred HHHHHhCCCCchhhCCCC
Confidence 999999999999999974
No 8
>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}
Probab=99.72 E-value=8.8e-19 Score=167.64 Aligned_cols=96 Identities=19% Similarity=0.176 Sum_probs=82.8
Q ss_pred hHHHHHHHhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEc
Q 000938 1116 VRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVH 1195 (1218)
Q Consensus 1116 VR~IL~eiRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVS 1195 (1218)
=|.-+.++|.++|.||+|||+|+. . .++..++++++.+||+|+..++++||||||....+.||+.|+++||+||+
T Consensus 10 ~~~~~~~~~~p~F~g~~Ic~sGf~-~----~er~~l~~~i~~~GG~~~~~l~~~cTHLV~~~~~~~K~~~A~~~~i~IVs 84 (112)
T 3l46_A 10 GRENLYFQGVPPFQDCILSFLGFS-D----EEKTNMEEMTEMQGGKYLPLGDERCTHLVVEENIVKDLPFEPSKKLYVVK 84 (112)
T ss_dssp --------CCCTTTTCEECEESCC-H----HHHHHHHHHHHHTTCEECCTTCTTCSEEEECTTTBSSCSSCCCSSCEEEE
T ss_pred ccccccccCCCccCCeEEEEeCCC-H----HHHHHHHHHHHHcCCEECcccCCCceEEEecCCchhhHHHHHHCCeeEec
Confidence 466678899999999999999963 2 24678999999999999999999999999999988999999999999999
Q ss_pred HHHHHHHHHhcccCCCCCCCC
Q 000938 1196 PGWVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1196 PdWLedCl~~wkRVDEsdYlL 1216 (1218)
++||++|+..+.++||+.|.+
T Consensus 85 ~eWl~dsi~~g~~ldE~~Y~~ 105 (112)
T 3l46_A 85 QEWFWGSIQMDARAGETMYLY 105 (112)
T ss_dssp HHHHHHHHHHTSCCCGGGSBC
T ss_pred HHHHHHHHHcCCccChhhcee
Confidence 999999999999999999998
No 9
>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.70 E-value=1.2e-18 Score=164.30 Aligned_cols=92 Identities=18% Similarity=0.241 Sum_probs=84.3
Q ss_pred HHHhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHH
Q 000938 1121 AAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVE 1200 (1218)
Q Consensus 1121 ~eiRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLe 1200 (1218)
.+++.++|.||+|||+|+-. .++..++++++.+||+|+..++++||||||....+.|+++|+++|++||+++||+
T Consensus 6 ~~~~~~~F~g~~i~~sg~~~-----~~r~~l~~~i~~~GG~~~~~~~~~~THLV~~~~~~~K~~~a~~~~i~IV~~~Wl~ 80 (109)
T 2cou_A 6 SGFKVPPFQDCILSFLGFSD-----EEKHSMEEMTEMQGGSYLPVGDERCTHLIVEENTVKDLPFEPSKKLFVVKQEWFW 80 (109)
T ss_dssp CSSCCCTTTTCBEEEESSCH-----HHHHHHHHHHHHHTCBCCCTTCTTCSEEEECTTTCSSCSSCCCTTSEEECHHHHH
T ss_pred ccccCCcCCCeEEEecCCCH-----HHHHHHHHHHHHcCCEEecccCCCccEEEEeCCccHHHHHHHHCCCeEecHHHHH
Confidence 35678899999999999632 2467899999999999999999999999999988999999999999999999999
Q ss_pred HHHHhcccCCCCCCCCC
Q 000938 1201 ASALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1201 dCl~~wkRVDEsdYlL~ 1217 (1218)
+|+..++++||..|.+.
T Consensus 81 dsi~~g~~ldE~~Y~~~ 97 (109)
T 2cou_A 81 GSIQMDARAGETMYLYE 97 (109)
T ss_dssp HHHHTTSCCCGGGTBCC
T ss_pred HHHHcCCcCChhccCCC
Confidence 99999999999999984
No 10
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=2.4e-17 Score=159.11 Aligned_cols=89 Identities=26% Similarity=0.326 Sum_probs=82.9
Q ss_pred hhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHHH
Q 000938 1124 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASA 1203 (1218)
Q Consensus 1124 RrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLedCl 1203 (1218)
..++|+||+|||+|++. +.+..|+++++.+||+|..+++.+||||||....+.||++|+++||+||+++||++|+
T Consensus 19 ~~~~f~g~~i~itG~~~-----~~r~~l~~~i~~~Gg~v~~~~s~~~ThLI~~~~~~~K~~~A~~~gi~IV~~~Wl~d~~ 93 (129)
T 2d8m_A 19 LGKILQGVVVVLSGFQN-----PFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCH 93 (129)
T ss_dssp HTTTSTTEEEEEESCCT-----THHHHHHHHHHHTTEEEESSCCTTCCEEEESSSSCHHHHHHHHHTCEEEETHHHHHHH
T ss_pred ccccCCCeEEEEeCCCc-----HHHHHHHHHHHHcCCEEeCCcCCCCeEEEecCCCChHHHHHHHCCCcEecHHHHHHHH
Confidence 35689999999999862 3567899999999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCCCC
Q 000938 1204 LLYRRANEQDFAIK 1217 (1218)
Q Consensus 1204 ~~wkRVDEsdYlL~ 1217 (1218)
..|++++|..|++.
T Consensus 94 ~~~~~l~e~~Y~l~ 107 (129)
T 2d8m_A 94 RMRRRLPSQRYLMA 107 (129)
T ss_dssp HTTSCCCGGGGBCS
T ss_pred HhCCcCChHhcccC
Confidence 99999999999984
No 11
>3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A*
Probab=99.64 E-value=2.2e-16 Score=149.70 Aligned_cols=93 Identities=20% Similarity=0.140 Sum_probs=81.3
Q ss_pred HhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHH
Q 000938 1123 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEAS 1202 (1218)
Q Consensus 1123 iRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLedC 1202 (1218)
++.++|+||+++|.+.-..+. ......++.+++.|||+|..++++.||||||.+.++.|+++|+++||+||+++||++|
T Consensus 3 ~~~p~f~g~vvyvd~~~~~g~-~~~s~~l~~~l~~~GA~v~~~l~~~vTHvV~~~~~~~~~~~A~~~~i~iV~~~Wv~~C 81 (107)
T 3pa6_A 3 MAAPILKDVVAYVEVWSSNGT-ENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLWVEKC 81 (107)
T ss_dssp -CCCTTTTCEEEEEEBCTTSC-CBCHHHHHHHHHHTTCEECSSCCTTCCEEEEESCCHHHHHHHHHHTCEEECHHHHHHH
T ss_pred ccccccCCEEEEEeccCCCCh-hhHHHHHHHHHHHcCCEEecccCCCccEEEEeCCCChHHHHHhcCCCEEECHHHHHHH
Confidence 467899999999987643221 1123578899999999999999999999999998889999999999999999999999
Q ss_pred HHhcccCCCCCCCC
Q 000938 1203 ALLYRRANEQDFAI 1216 (1218)
Q Consensus 1203 l~~wkRVDEsdYlL 1216 (1218)
++.|+++||..|++
T Consensus 82 ~~~~~~vdE~~Y~i 95 (107)
T 3pa6_A 82 RTAGAHIDESLFPA 95 (107)
T ss_dssp HHHTSCCCGGGSBC
T ss_pred HHhCccCChhcccC
Confidence 99999999999998
No 12
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=99.63 E-value=3.3e-16 Score=140.12 Aligned_cols=87 Identities=24% Similarity=0.285 Sum_probs=75.3
Q ss_pred hhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccC--CCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHH
Q 000938 1124 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID--DQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEA 1201 (1218)
Q Consensus 1124 RrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd--~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLed 1201 (1218)
..++|+||+|||+|+. .+.+..++++++.+||+|...++ .+||||||....+.|+..+ .|++||+++||++
T Consensus 4 ~~~~f~g~~~~i~g~~-----~~~~~~l~~~i~~~GG~~~~~~~~~~~~THlI~~~~~~~K~~~~--~~~~iV~~~Wi~d 76 (92)
T 4id3_A 4 SSKIFKNCVIYINGYT-----KPGRLQLHEMIVLHGGKFLHYLSSKKTVTHIVASNLPLKKRIEF--ANYKVVSPDWIVD 76 (92)
T ss_dssp --CTTTTCEEEECSCC-----SSCHHHHHHHHHHTTCEEESSCCCTTTCCEEECSCCCHHHHHHT--TTSCEECTHHHHH
T ss_pred cccccCCEEEEEeCCC-----CcCHHHHHHHHHHCCCEEEEEecCCCceEEEEecCCCHHHHHHc--CCCCEEcccHHHH
Confidence 4579999999999953 23467899999999999999999 8999999999888875433 7999999999999
Q ss_pred HHHhcccCCCCCCCCC
Q 000938 1202 SALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1202 Cl~~wkRVDEsdYlL~ 1217 (1218)
|+..++++||++|.|.
T Consensus 77 ci~~~~~l~e~~Y~l~ 92 (92)
T 4id3_A 77 SVKEARLLPWQNYSLT 92 (92)
T ss_dssp HHHHTSCCCGGGGBCC
T ss_pred HHHcCCcCChhhcccC
Confidence 9999999999999874
No 13
>2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens}
Probab=99.56 E-value=2.7e-15 Score=136.66 Aligned_cols=86 Identities=20% Similarity=0.281 Sum_probs=76.8
Q ss_pred hhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccC-CCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHHH
Q 000938 1125 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID-DQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASA 1203 (1218)
Q Consensus 1125 rqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd-~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLedCl 1203 (1218)
.++|+||+||++|+. .+.+..|.+++..+||++..+++ ..|||+||....+.|++.++ +++||+|+||++|+
T Consensus 10 ~~lF~g~~~~isg~~-----~~~~~~L~~~i~~~GG~~~~~~~~~~~THlI~~~~~~~k~~~~~--~~~iV~p~Wl~dci 82 (97)
T 2ebw_A 10 STIFSGVAIYVNGYT-----DPSAEELRKLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKELK--GEKVIRPEWIVESI 82 (97)
T ss_dssp CCTTTTCEEEECSSC-----SSCHHHHHHHHHHTTCEECSSCCSSSCCEEECSCCCTTHHHHTS--SSCCBCTHHHHHHH
T ss_pred CCCCCCeEEEEeCCC-----cccHHHHHHHHHHcCCEEeeecCCCCCEEEEecCCChHHHHHhc--CCCEeChHHHHHHH
Confidence 468999999999963 23567899999999999998887 68999999999889998765 99999999999999
Q ss_pred HhcccCCCCCCCCC
Q 000938 1204 LLYRRANEQDFAIK 1217 (1218)
Q Consensus 1204 ~~wkRVDEsdYlL~ 1217 (1218)
..++++||+.|.|-
T Consensus 83 ~~~~~l~~~~Y~l~ 96 (97)
T 2ebw_A 83 KAGRLLSYIPYQLY 96 (97)
T ss_dssp HHTSCCCSGGGBSC
T ss_pred HcCCccCchHcEec
Confidence 99999999999874
No 14
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=99.53 E-value=6.4e-15 Score=160.19 Aligned_cols=93 Identities=15% Similarity=0.176 Sum_probs=86.1
Q ss_pred HHHHhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccC-CCccEEEeCCCCCHHHHHHHHcCCcEEcHHH
Q 000938 1120 LAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID-DQVTHVVANSLGTDKVNWALSTGRFVVHPGW 1198 (1218)
Q Consensus 1120 L~eiRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd-~kVTHLVAss~gTeKVk~Alk~GIkIVSPdW 1198 (1218)
+..++.++|+||+|||+|+.+. ++..++++++.+||+|..+++ ++||||||....+.|+++|+++||+||+++|
T Consensus 192 ~~~~~~~~f~g~~i~~tG~~~~-----~r~~l~~li~~~GG~~~~~ls~~~~THLI~~~~~g~K~~~A~~~gi~IV~~~W 266 (298)
T 3olc_X 192 MEDFKCPIFLGCIICVTGLCGL-----DRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPKGQKYECAKRWNVHCVTTQW 266 (298)
T ss_dssp GGGGBCCTTTTCEEEECSCCHH-----HHHHHHHHHHHTTCEECSSCCTTTCCEEECSSSCSHHHHHHHHTTCEEECHHH
T ss_pred cccccccccCCeEEEEeCCCCc-----cHHHHHHHHHHcCCEEeceecCCCceEEEEeCCCchHHHHHHHCCCeEEeHHH
Confidence 4567889999999999997542 467899999999999999999 8999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCCCCCC
Q 000938 1199 VEASALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1199 LedCl~~wkRVDEsdYlL~ 1217 (1218)
|++|+..|+++||+.|.+.
T Consensus 267 l~dsi~~g~~lde~~Y~l~ 285 (298)
T 3olc_X 267 FFDSIEKGFCQDESIYKTE 285 (298)
T ss_dssp HHHHHHHTSCCCGGGSBSC
T ss_pred HHHHHHCCCCCCchhcCCC
Confidence 9999999999999999985
No 15
>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5
Probab=99.46 E-value=4.2e-14 Score=136.99 Aligned_cols=92 Identities=20% Similarity=0.274 Sum_probs=77.9
Q ss_pred HHHHHhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHH---cCCcEEc
Q 000938 1119 ILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALS---TGRFVVH 1195 (1218)
Q Consensus 1119 IL~eiRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk---~GIkIVS 1195 (1218)
.+.+.+..+|+||+|+|+|+- ...++.|+++++.+||+|...+++.|||||+.+. +.+++++++ .+++||+
T Consensus 32 ~~~~~~~~lF~g~~i~i~G~~-----~~~~~~L~~~i~~~Gg~v~~~l~~~vTHvI~~~~-~~~~~~~~~~~~~~~~iV~ 105 (132)
T 1wf6_A 32 SAFQAPEDLLDGCRIYLCGFS-----GRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDY-DDELKQFWNKSAHRPHVVG 105 (132)
T ss_dssp GGCCCCTTTTTTCEEEEESCC-----SHHHHHHHHHHHHTTCEEESSCCSSCCEEEESSC-CSHHHHHHHHSCCCCCEEE
T ss_pred ccccccccccCCEEEEEECCC-----hHHHHHHHHHHHHCCCEEeCcCCCCCeEEEECCc-hHHHHHHHHhhCCCCeEec
Confidence 556777899999999999972 1235678999999999999999999999999874 455555543 4789999
Q ss_pred HHHHHHHHHhcccCCCCCCCC
Q 000938 1196 PGWVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1196 PdWLedCl~~wkRVDEsdYlL 1216 (1218)
++||++|+..+++++|..|++
T Consensus 106 ~~Wv~dsi~~~~ll~e~~Y~~ 126 (132)
T 1wf6_A 106 AKWLLECFSKGYMLSEEPYIH 126 (132)
T ss_dssp HHHHHHHHHHSSCCCSGGGBC
T ss_pred hHHHHHHHHcCCcCCHhhccC
Confidence 999999999999999999986
No 16
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=99.44 E-value=8.4e-14 Score=143.02 Aligned_cols=89 Identities=21% Similarity=0.302 Sum_probs=79.2
Q ss_pred hhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCC------CCHHHHHHHHcCCcEEcHH
Q 000938 1124 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL------GTDKVNWALSTGRFVVHPG 1197 (1218)
Q Consensus 1124 RrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~------gTeKVk~Alk~GIkIVSPd 1197 (1218)
|...+++++|||||+.+. ++..+.++++.+||.|..++++.|||||+... .|.||..|++.|++||+++
T Consensus 1 ~~~~~~~~~i~~sg~~~~-----~~~~l~~~~~~~G~~~~~~~~~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~~~ 75 (229)
T 1l0b_A 1 KERAERDISMVVSGLTPK-----EVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSYS 75 (229)
T ss_dssp --CCCCCCEEEEESCCHH-----HHHHHHHHHHHTTCEECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEETH
T ss_pred CCCCCCCeEEEEcCCCHH-----HHHHHHHHHHHcCCEEeCCcCCCCCEEEEcCCccccccccHHHHHHHHCCCcEecHH
Confidence 356789999999997542 34578999999999999999999999999974 7999999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCC
Q 000938 1198 WVEASALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1198 WLedCl~~wkRVDEsdYlL~ 1217 (1218)
||.+|+..+++++|+.|.+.
T Consensus 76 Wl~~~~~~~~~~~e~~y~~~ 95 (229)
T 1l0b_A 76 WVIKSIQERKLLSVHEFEVK 95 (229)
T ss_dssp HHHHHHTTTSCCCSGGGBCC
T ss_pred HHHHHHHCCCcCChHHeEec
Confidence 99999999999999999873
No 17
>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A
Probab=99.43 E-value=2.2e-13 Score=129.16 Aligned_cols=89 Identities=16% Similarity=0.230 Sum_probs=80.9
Q ss_pred hhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHH--cCCcEEcHHHHHHHH
Q 000938 1126 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALS--TGRFVVHPGWVEASA 1203 (1218)
Q Consensus 1126 qILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk--~GIkIVSPdWLedCl 1203 (1218)
.+|.||+++|+|.+|. .++..+++++.++||.|...++.+|||+|+.+..+.|+..|++ .++.+|+|+||++|+
T Consensus 6 d~F~g~~f~l~~~~p~----~~r~~l~ryiia~GG~v~~~~~~~vTHvIt~~~~d~~~~~a~~~~p~~~~V~P~WI~~Ci 81 (104)
T 3pc6_A 6 DFFEGKHFFLYGEFPG----DERRRLIRYVTAFNGELEDYMNERVQFVITAQEWDPNFEEALMENPSLAFVRPRWIYSCN 81 (104)
T ss_dssp CTTTTCEEEEESCCST----THHHHHHHHHHHTTCEECSSCCTTCCEEEESSCCCHHHHHHHTTCTTCEEECHHHHHHHH
T ss_pred hhhCCeEEEEcCCCcH----HHHHHHHHHHHHcCCEEEcccCCCceEEEeCCCCChhHHHHhhhCCCCeEEccHHHHHHH
Confidence 4899999999998863 2467799999999999999999999999999999999998885 479999999999999
Q ss_pred HhcccCCCCCCCCCC
Q 000938 1204 LLYRRANEQDFAIKP 1218 (1218)
Q Consensus 1204 ~~wkRVDEsdYlL~p 1218 (1218)
..++.+++++|.+.|
T Consensus 82 ~~~klvp~~~y~~~~ 96 (104)
T 3pc6_A 82 EKQKLLPHQLYGVVP 96 (104)
T ss_dssp HHTSCCCGGGGBCCC
T ss_pred hcCccCCcccceecc
Confidence 999999999999865
No 18
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=99.38 E-value=4.3e-13 Score=137.05 Aligned_cols=84 Identities=21% Similarity=0.188 Sum_probs=76.5
Q ss_pred cCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCC---CCCHHHHHHHHcCCcEEcHHHHHHHHHh
Q 000938 1129 AGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS---LGTDKVNWALSTGRFVVHPGWVEASALL 1205 (1218)
Q Consensus 1129 kGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss---~gTeKVk~Alk~GIkIVSPdWLedCl~~ 1205 (1218)
.|++|++||+.+. ++..+.++++.|||.+..++++.|||||+.. ..|.|+..|++.|++||+++||.+|+..
T Consensus 1 ~~~vi~~sg~~~~-----~~~~l~~~~~~~G~~~~~~~~~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~~Wl~~c~~~ 75 (210)
T 2nte_A 1 GPLVLIGSGLSSE-----QQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRR 75 (210)
T ss_dssp CCCEEEESSCCHH-----HHHHHHHHHHHTTCEEESSCCTTCCEEEESSSSCCCSHHHHHHHHTTCEEEETHHHHHHHHH
T ss_pred CCEEEEECCCCHH-----HHHHHHHHHHHcCCEEeCCCCCCCeEEEEcCCCcchHHHHHHHHhcCCEEecHHHHHHHHHc
Confidence 3789999997532 3567999999999999999999999999987 7899999999999999999999999999
Q ss_pred cccCCCCCCCCC
Q 000938 1206 YRRANEQDFAIK 1217 (1218)
Q Consensus 1206 wkRVDEsdYlL~ 1217 (1218)
+++++|.+|.+.
T Consensus 76 ~~~~~e~~y~~~ 87 (210)
T 2nte_A 76 KVCEQEEKYEIP 87 (210)
T ss_dssp TSCCCGGGTBCT
T ss_pred CCcCChhhccCC
Confidence 999999999874
No 19
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=99.37 E-value=4.1e-13 Score=135.82 Aligned_cols=84 Identities=26% Similarity=0.340 Sum_probs=75.5
Q ss_pred cCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCC------CCHHHHHHHHcCCcEEcHHHHHHH
Q 000938 1129 AGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL------GTDKVNWALSTGRFVVHPGWVEAS 1202 (1218)
Q Consensus 1129 kGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~------gTeKVk~Alk~GIkIVSPdWLedC 1202 (1218)
+|++|++||+.+. ++..+.++++.+||.+..++++.|||||+... .|.||..|++.|++||+++||.+|
T Consensus 3 ~~~~~~~sg~~~~-----~~~~l~~~~~~~G~~~~~~~~~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV~~~Wl~~~ 77 (214)
T 1t15_A 3 KRMSMVVSGLTPE-----EFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQS 77 (214)
T ss_dssp -CCEEEEESCCHH-----HHHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETHHHHHH
T ss_pred CcEEEEECCCCHH-----HHHHHHHHHHHhCCEEeCccCCCCcEEEEeCCcccchhhhHHHHHHHhcCCEEeCHHHHHHH
Confidence 6899999997432 35678899999999999999999999999974 599999999999999999999999
Q ss_pred HHhcccCCCCCCCCC
Q 000938 1203 ALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1203 l~~wkRVDEsdYlL~ 1217 (1218)
+..+++++|+.|.+.
T Consensus 78 ~~~~~~~~e~~y~~~ 92 (214)
T 1t15_A 78 IKERKMLNEHDFEVR 92 (214)
T ss_dssp HHTTSCCCGGGGBCC
T ss_pred HHCCCcCChHHeEee
Confidence 999999999999874
No 20
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=99.34 E-value=1.5e-12 Score=134.08 Aligned_cols=86 Identities=14% Similarity=0.188 Sum_probs=72.0
Q ss_pred HhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCC-CCHHHHHHHHcCCcEEcHHHHHH
Q 000938 1123 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL-GTDKVNWALSTGRFVVHPGWVEA 1201 (1218)
Q Consensus 1123 iRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~-gTeKVk~Alk~GIkIVSPdWLed 1201 (1218)
-+++.++|++|+|||+.+ ..+.++++.|||.|..++++ ||||||... .|.|+..|++.|++||+++||++
T Consensus 5 ~~~~~~~~~~v~~sG~~~--------~~~~~~i~~lGg~~~~~~~~-~THlI~~~~~rt~K~l~a~~~g~~IV~~~Wl~~ 75 (209)
T 2etx_A 5 KLNQESTAPKVLFTGVVD--------ARGERAVLALGGSLAGSAAE-ASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQ 75 (209)
T ss_dssp -------CCEEEECSSCC--------HHHHHHHHHTTCEECSSTTT-CSEEECSSCCCSHHHHHHHHHTCCEECTHHHHH
T ss_pred cccccCCCcEEEEeCCCc--------HHHHHHHHHCCCEEeCCCCC-ceEEEECCCCCCHHHHHHHhcCCccccHHHHHH
Confidence 467789999999999853 24678899999999999984 999999874 69999999999999999999999
Q ss_pred HHHhcccCCCCCCCCC
Q 000938 1202 SALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1202 Cl~~wkRVDEsdYlL~ 1217 (1218)
|+..++.++|++|.+.
T Consensus 76 ~~~~~~~l~e~~y~~~ 91 (209)
T 2etx_A 76 SRKAGFFLPPDEYVVT 91 (209)
T ss_dssp HHHHTSCCCSGGGBCC
T ss_pred HHHcCCCCChhhcccc
Confidence 9999999999999874
No 21
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=99.33 E-value=7.3e-13 Score=138.36 Aligned_cols=89 Identities=19% Similarity=0.276 Sum_probs=79.2
Q ss_pred HhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCC-CCCHHHHHHHHcCCcEEcHHHHHH
Q 000938 1123 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS-LGTDKVNWALSTGRFVVHPGWVEA 1201 (1218)
Q Consensus 1123 iRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss-~gTeKVk~Alk~GIkIVSPdWLed 1201 (1218)
++..++.|++|+|||+-+. ++..+.++++.+||.|..++ .+||||||.. .+|.|+..|+..|++||+++||.+
T Consensus 9 ~~~~~~~~~~i~~SG~~~~-----~~~~l~~~i~~lGg~v~~~~-~~~THLI~~~~~rT~K~l~A~~~g~~IVs~~Wl~~ 82 (219)
T 3sqd_A 9 MKLTPELTPFVLFTGFEPV-----QVQQYIKKLYILGGEVAESA-QKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEE 82 (219)
T ss_dssp CCCCGGGCCEEEECSCCHH-----HHHHHHHHHHHTTCEECSSG-GGCSEEECSSCCCCHHHHHHTTTCSEEECHHHHHH
T ss_pred cccCCCCCeEEEEeCCChH-----HHHHHHHHHHHCCCEEeCCC-CCceEEEECCCCCCHHHHHHHHcCCCEecHHHHHH
Confidence 5667899999999997432 34578899999999999987 8999999987 468899999999999999999999
Q ss_pred HHHhcccCCCCCCCCC
Q 000938 1202 SALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1202 Cl~~wkRVDEsdYlL~ 1217 (1218)
|+..++.++|++|.+.
T Consensus 83 c~~~~~~l~e~~y~l~ 98 (219)
T 3sqd_A 83 CFRCQKFIDEQNYILR 98 (219)
T ss_dssp HHHHTSCCCSGGGBCC
T ss_pred HHHcCCCCChHhccCC
Confidence 9999999999999984
No 22
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=99.24 E-value=7.9e-12 Score=131.95 Aligned_cols=87 Identities=18% Similarity=0.285 Sum_probs=75.6
Q ss_pred hhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEec--ccCCCccEEEeCCC-CCHHHHHHHHcCCcEEcHHHHHHH
Q 000938 1126 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTK--HIDDQVTHVVANSL-GTDKVNWALSTGRFVVHPGWVEAS 1202 (1218)
Q Consensus 1126 qILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVss--dVd~kVTHLVAss~-gTeKVk~Alk~GIkIVSPdWLedC 1202 (1218)
++.++.+|+|||+.+ .++..++++++.+||.|.. +++++||||||... .|.|+..|+..|++||+++||.+|
T Consensus 5 ~~~~~~~~~~Sg~~~-----~~~~~l~~~i~~LGg~~~~~~~~~~~~THlV~~~~~RT~K~l~aia~G~wIvs~~wl~~s 79 (235)
T 3al2_A 5 SLKKQYIFQLSSLNP-----QERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEAC 79 (235)
T ss_dssp ---CCCEEEEESCCH-----HHHHHHHHHHHHTTCEECCSSSCCTTCCEEEESSCCCSHHHHHHHHTTCEEECTHHHHHH
T ss_pred cCCCCEEEEEcCCCH-----HHHHHHHHHHHHcCCEEeccCCCCCCCcEEEECCCCCCHHHHHHHHcCCcCccHHHHHHH
Confidence 345789999999743 2356789999999999975 68999999999986 599999999999999999999999
Q ss_pred HHhcccCCCCCCCCC
Q 000938 1203 ALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1203 l~~wkRVDEsdYlL~ 1217 (1218)
+...+.+||..|.|.
T Consensus 80 ~~~g~~l~E~~ye~~ 94 (235)
T 3al2_A 80 RTAGHFVQEEDYEWG 94 (235)
T ss_dssp HHHTSCCCSGGGBTT
T ss_pred HHcCCCCChhceeec
Confidence 999999999999984
No 23
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=99.20 E-value=1.6e-11 Score=133.67 Aligned_cols=83 Identities=13% Similarity=0.229 Sum_probs=75.4
Q ss_pred hhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHHHHh
Q 000938 1126 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALL 1205 (1218)
Q Consensus 1126 qILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLedCl~~ 1205 (1218)
.+|+|++|||||+.+. .+..+.++++.+||++..+++.+||||||....|.||++|++.|++||+++||.+|+..
T Consensus 104 ~~l~g~~~~~tG~~~~-----~r~~l~~~i~~~GG~v~~~~t~~tTHLI~~~~~t~Ky~~A~~~gi~IV~~~Wl~~c~~~ 178 (298)
T 3olc_X 104 MVMSDVTISCTSLEKE-----KREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEK 178 (298)
T ss_dssp CTTTTCEEEEESCCHH-----HHHHHHHHHHHTTCEECSSCCTTCCEEEESSSCSHHHHHHHHTTCCEECHHHHHHHHHH
T ss_pred cccCCeEEEeCCCcHH-----hHHHHHHHHHHCCCEEecCcCCCeeEEEEeCCCChHHHHHHHCCCeEeeHHHHHHHHHc
Confidence 4899999999998652 46789999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCC
Q 000938 1206 YRRANEQD 1213 (1218)
Q Consensus 1206 wkRVDEsd 1213 (1218)
.+.++...
T Consensus 179 ~~~~~~~~ 186 (298)
T 3olc_X 179 SQEKKITR 186 (298)
T ss_dssp HHTTCCSS
T ss_pred CCcCCccc
Confidence 88776543
No 24
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=99.13 E-value=4.4e-11 Score=123.10 Aligned_cols=83 Identities=19% Similarity=0.265 Sum_probs=72.7
Q ss_pred CceeeeeccccCCCCCCCCchHHHHHHHhCC-EEecccCCCccEEEeCC-CCCHHHHHHHHcCCcEEcHHHHHHHHHhcc
Q 000938 1130 GCRIVFSRVFPVGEANPHLHPLWQTAEQFGA-VCTKHIDDQVTHVVANS-LGTDKVNWALSTGRFVVHPGWVEASALLYR 1207 (1218)
Q Consensus 1130 GCvIvFSGIfP~g~~nPer~~LwkLAeqLGA-tVssdVd~kVTHLVAss-~gTeKVk~Alk~GIkIVSPdWLedCl~~wk 1207 (1218)
.-+|++||+-+ .++..+.++++.||| .+..++++.||||||.. ..|.|+..|++.|++||+++||.+|++..+
T Consensus 11 ~~~~~~sgl~~-----~~~~~l~~~i~~lgG~~~~~~~~~~~THlv~~~~~rT~K~l~ai~~g~~Iv~~~Wv~~~~~~g~ 85 (199)
T 3u3z_A 11 TRTLVMTSMPS-----EKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARGCWVLSYDWVLWSLELGH 85 (199)
T ss_dssp CCEEEEESCCH-----HHHHHHHHHHHHHCSCEEESSCCTTEEEEEESSCCCBHHHHHHHHTTCEEEETHHHHHHHHHTS
T ss_pred CeEEEEcCCCH-----HHHHHHHHHHHHcCCcEEecCCCCCCeEEEECCCCCCHHHHHHHHCCCcEEeHHHHHHHhhCCC
Confidence 45789999622 235568899999977 78899999999999988 489999999999999999999999999999
Q ss_pred cCCCCCCCCC
Q 000938 1208 RANEQDFAIK 1217 (1218)
Q Consensus 1208 RVDEsdYlL~ 1217 (1218)
++||++|.|.
T Consensus 86 ~l~e~~y~~~ 95 (199)
T 3u3z_A 86 WISEEPFELS 95 (199)
T ss_dssp CCCSGGGBCT
T ss_pred CCChhhcccc
Confidence 9999999874
No 25
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=99.11 E-value=4.2e-11 Score=125.74 Aligned_cols=82 Identities=17% Similarity=0.253 Sum_probs=71.2
Q ss_pred hccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCC-CCHHHHHHHHcCCcEEcHHHHHHHHHh
Q 000938 1127 ILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL-GTDKVNWALSTGRFVVHPGWVEASALL 1205 (1218)
Q Consensus 1127 ILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~-gTeKVk~Alk~GIkIVSPdWLedCl~~ 1205 (1218)
.-++.+|+|||+-+. ...++++.+||.+..+++ +|||||+... .|.|+..|+..|++||+++||.+|+..
T Consensus 5 ~~~~~~v~fSG~~~~--------~~~~~i~~lGg~v~~~~~-~~THlV~~~~~RT~K~l~Aia~g~~IVs~~Wl~~~~~~ 75 (220)
T 3l41_A 5 ASKRVYITFTGYDKK--------PSIDNLKKLDMSITSNPS-KCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKT 75 (220)
T ss_dssp --CCEEEEECSCSSC--------CCCGGGGGGTEEECSCTT-TCSEEECSSCCCBHHHHHHGGGCCEEECHHHHHHHHHH
T ss_pred ccceEEEEEeccCCC--------CCcchHhhcceeeccCch-hhhhhhhhhHhhhcceeecCCCCCeEEEhHHHHhhhhh
Confidence 457889999998543 125678899999999986 6999999875 799999999999999999999999999
Q ss_pred cccCCCCCCCCC
Q 000938 1206 YRRANEQDFAIK 1217 (1218)
Q Consensus 1206 wkRVDEsdYlL~ 1217 (1218)
++.++|.+|.+.
T Consensus 76 ~~~l~e~~y~l~ 87 (220)
T 3l41_A 76 HEIVDEEPYLLN 87 (220)
T ss_dssp TSCCCSGGGBCC
T ss_pred hhccccCccccC
Confidence 999999999874
No 26
>2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens}
Probab=99.07 E-value=2e-10 Score=108.59 Aligned_cols=93 Identities=18% Similarity=0.180 Sum_probs=70.9
Q ss_pred HHhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHH-HH-----cCCcEEc
Q 000938 1122 AEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWA-LS-----TGRFVVH 1195 (1218)
Q Consensus 1122 eiRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~A-lk-----~GIkIVS 1195 (1218)
+....+|+||+++| +|.+...+.+.-...+|..+||++..++++.|||||+.+..+.|-... ++ .+++||+
T Consensus 6 ~~~~~~F~g~~v~~---~p~~~~~~r~~i~~~~a~~~Ga~v~~~~~~~vTHVVvd~~~s~~~~l~~l~~~~l~~~~~iV~ 82 (106)
T 2jw5_A 6 EEAEEWLSSLRAHV---VRTGIGRARAELFEKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVK 82 (106)
T ss_dssp CCGGGCGGGSCCCB---CTTTCCSSSTTHHHHHHHHTTCCCCSTTCTTCCEEEECSSSCHHHHHHHTTCSSCCSSCEEEE
T ss_pred ccCcCEeCCeEEEE---EecCCchHHHHHHHHHHHHcCCEEeeccCCCccEEEEcCCCCHHHHHHHHhhcccCCCcEEec
Confidence 35678999999996 455443333333444899999999999999999999986444443221 11 3568999
Q ss_pred HHHHHHHHHhcccCCCCCCCCC
Q 000938 1196 PGWVEASALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1196 PdWLedCl~~wkRVDEsdYlL~ 1217 (1218)
++|+.+|+..|+.+||..|.+.
T Consensus 83 ~~Wv~dci~~~~llde~~y~~~ 104 (106)
T 2jw5_A 83 SAWLSLCLQERRLVDVAGFSIF 104 (106)
T ss_dssp HHHHHHHHHTCSCCCGGGTBCS
T ss_pred CchHHHHHhcCcccCccccccc
Confidence 9999999999999999999875
No 27
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=99.05 E-value=3e-10 Score=121.42 Aligned_cols=94 Identities=11% Similarity=0.085 Sum_probs=68.3
Q ss_pred HhhhhccCceeeeeccccCCCCCC---C-Cc-hHHHHHHHhCCEEecccCCCccEEEeCCCCCH--HHHHHHH---cCCc
Q 000938 1123 EQRKILAGCRIVFSRVFPVGEANP---H-LH-PLWQTAEQFGAVCTKHIDDQVTHVVANSLGTD--KVNWALS---TGRF 1192 (1218)
Q Consensus 1123 iRrqILkGCvIvFSGIfP~g~~nP---e-r~-~LwkLAeqLGAtVssdVd~kVTHLVAss~gTe--KVk~Alk---~GIk 1192 (1218)
.+..+|+||+++|.+.-..+.... . +. .+..++..+||+|...+++.|||||+....+. .++...+ .+++
T Consensus 160 ~~~~lF~~~~vy~~~~~~~~~~~~~i~~~~l~~~~~~i~~~GG~v~~~l~~~vTHVVv~~~~~r~~~~~~~~~~~~~~~~ 239 (263)
T 3ii6_X 160 SPLSMFRRHTVYLDSYAVINDLSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFK 239 (263)
T ss_dssp CGGGTTTTCEEEECCBSSTTCGGGBCCSSHHHHHHHHHHHTTCEEESSCCTTCCEEEECSCCTTHHHHHHHHHTCSSCCE
T ss_pred CcchhhCCeEEEEecccccCCcccccchhHHHHHHHHHHccCCEEecCCCCCceEEEECCCCccHHHHHHHHhhcCCCCE
Confidence 345699999999976432221100 1 11 23567899999999999999999999874331 1222222 3689
Q ss_pred EEcHHHHHHHHHhcccCCCCCCCC
Q 000938 1193 VVHPGWVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1193 IVSPdWLedCl~~wkRVDEsdYlL 1216 (1218)
||+++||++|+..++++||.+|.|
T Consensus 240 iV~~~Wv~dci~~~~~l~E~~Y~i 263 (263)
T 3ii6_X 240 ILKESWVTDSIDKCELQEENQYLI 263 (263)
T ss_dssp EEETHHHHHHHHTTSCCCGGGTBC
T ss_pred EeChHHHHHHHHcCCcCCHhhCCC
Confidence 999999999999999999999986
No 28
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=98.99 E-value=5.6e-10 Score=119.20 Aligned_cols=93 Identities=13% Similarity=0.169 Sum_probs=78.5
Q ss_pred hhhccCceeeeeccccCCCC-----------------------CC-CCchHHHHHHHhCCEEecccCCC------ccEEE
Q 000938 1125 RKILAGCRIVFSRVFPVGEA-----------------------NP-HLHPLWQTAEQFGAVCTKHIDDQ------VTHVV 1174 (1218)
Q Consensus 1125 rqILkGCvIvFSGIfP~g~~-----------------------nP-er~~LwkLAeqLGAtVssdVd~k------VTHLV 1174 (1218)
..+|.||.+++|+....... .+ .+..|.++++.+||.|..+++.. +||||
T Consensus 13 ~~iF~g~~F~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~I~~~GG~v~~~~~~~~~~~~~~t~LI 92 (259)
T 1kzy_C 13 KTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLI 92 (259)
T ss_dssp TTTTTTEEEEECCCC---------------------------CCCCCHHHHHHHHHTTTCEECSSCCTTTTTTTCEEEEE
T ss_pred CcCcCCcEEEEEcccccccccccccccccccccccccccccccCcccHHHHHHHHHHCCCEEecCccccccccCCCeEEE
Confidence 67999999999998653110 01 23579999999999999999865 79999
Q ss_pred eCC-CCCHHHHHHHHcCCcEEcHHHHHHHHHhcccCCCCCCCCC
Q 000938 1175 ANS-LGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1175 Ass-~gTeKVk~Alk~GIkIVSPdWLedCl~~wkRVDEsdYlL~ 1217 (1218)
+.. ..|.|+.+|++.|++||+++||.+|+...+.+++..|+|.
T Consensus 93 a~~~~rt~K~l~ala~g~~iVs~~Wl~dc~~~~~~l~~~~Y~l~ 136 (259)
T 1kzy_C 93 ADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLP 136 (259)
T ss_dssp ESSCCCSHHHHHHHHHTCCEEETHHHHHHHHHTSCCCGGGSBCC
T ss_pred cCCCCCcHHHHHHHhcCCCCccHHHHHHHHHcCCcCCHHHccCC
Confidence 987 6799999999999999999999999999999999999984
No 29
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=98.96 E-value=9.7e-10 Score=116.42 Aligned_cols=87 Identities=17% Similarity=0.195 Sum_probs=74.5
Q ss_pred hhccCceeeeecc--ccCCCCCCCCchHHHHHHHhCCEEecc-----c--CC-------------------CccEEEeCC
Q 000938 1126 KILAGCRIVFSRV--FPVGEANPHLHPLWQTAEQFGAVCTKH-----I--DD-------------------QVTHVVANS 1177 (1218)
Q Consensus 1126 qILkGCvIvFSGI--fP~g~~nPer~~LwkLAeqLGAtVssd-----V--d~-------------------kVTHLVAss 1177 (1218)
.+|+||.+|++|. ++. ..+.+|.++++.+||++..+ + .. ..||||+..
T Consensus 1 ~lF~g~~F~ls~~~~~~~----~~k~~L~~~I~~~GG~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~ 76 (241)
T 2vxb_A 1 LIFDDCVFAFSGPVHEDA----YDRSALETVVQDHGGLVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDT 76 (241)
T ss_dssp CTTTTEEEEECCCSSTTS----SCHHHHHHHHHHTTCEECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSS
T ss_pred CCCCCcEEEEecCCCCch----hhHHHHHHHHHHCCCEEecCcchhhccCccccccccccccccccccccccceEEEcCC
Confidence 3799999999997 322 24578999999999999887 2 21 249999997
Q ss_pred C-CCHHHHHHHHcCCcEEcHHHHHHHHHhcccCCCCCCCC
Q 000938 1178 L-GTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1178 ~-gTeKVk~Alk~GIkIVSPdWLedCl~~wkRVDEsdYlL 1216 (1218)
. .|.||.+|++.|++||+++||.+|+...+.+++..|+|
T Consensus 77 ~~rt~K~~~ala~gipiV~~~Wi~dc~~~~~~~~~~~ylL 116 (241)
T 2vxb_A 77 FSRKVKYLEALAFNIPCVHPQFIKQCLKMNRVVDFSPYLL 116 (241)
T ss_dssp CCCCHHHHHHHHHTCCEECTHHHHHHHHHTSCCCSGGGBB
T ss_pred CCCcHHHHHHHHcCCCEecHHHHHHHHHcCCcCChhhccC
Confidence 4 59999999999999999999999999999999999987
No 30
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=98.93 E-value=6.8e-10 Score=103.11 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=69.6
Q ss_pred hhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHHHH
Q 000938 1125 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASAL 1204 (1218)
Q Consensus 1125 rqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLedCl~ 1204 (1218)
..+|.|.+|||+|.++. .+.++..+++.+||+|...|+.++|||||....+.|+++|.++||+||+.+|+.+++.
T Consensus 5 ~~~l~G~~~v~TG~l~~-----~R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~~gsK~~kA~~lgI~Ii~E~~f~~~l~ 79 (92)
T 1l7b_A 5 GEALKGLTFVITGELSR-----PREEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLTEEELYRLLE 79 (92)
T ss_dssp CCSSTTCEEECSTTTTS-----CHHHHHHHHHHTTCEEESCCSSSCCCBEECSSSSTTHHHHHCSSSCCEEHHHHHHHHH
T ss_pred CCCcCCcEEEEecCCCC-----CHHHHHHHHHHcCCEEeCcccCCeeEEEeCCCCChHHHHHHHcCCcEEeHHHHHHHHH
Confidence 45799999999999854 4678999999999999999999999999998888999999999999999999999886
Q ss_pred h
Q 000938 1205 L 1205 (1218)
Q Consensus 1205 ~ 1205 (1218)
.
T Consensus 80 ~ 80 (92)
T 1l7b_A 80 A 80 (92)
T ss_dssp H
T ss_pred h
Confidence 4
No 31
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=98.93 E-value=1.2e-09 Score=116.90 Aligned_cols=91 Identities=15% Similarity=0.137 Sum_probs=74.3
Q ss_pred HHHHhhhhccCceeee-eccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcC-CcEEcHH
Q 000938 1120 LAAEQRKILAGCRIVF-SRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTG-RFVVHPG 1197 (1218)
Q Consensus 1120 L~eiRrqILkGCvIvF-SGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~G-IkIVSPd 1197 (1218)
|.....++|+|++||+ +|. ..+.+..|.+++..+||+|..+..+.+||+|+... +.|++.|+++| ++||+|+
T Consensus 3 ~~~~~s~lF~G~~f~V~sg~-----~~~~k~~L~~lI~~~GG~v~~n~~~~t~~iIa~~~-~~k~~~~~~~g~~~IV~p~ 76 (263)
T 3ii6_X 3 MGSKISNIFEDVEFCVMSGT-----DSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSE-NIRVKNIILSNKHDVVKPA 76 (263)
T ss_dssp ---CCCCTTTTCEEEECCCC-------CCHHHHHHHHHHTTCEECSSCCTTEEEEECSSC-CHHHHHHHHSCSCCEECHH
T ss_pred CCCcCcccCCCeEEEEEcCC-----CCCCHHHHHHHHHHcCCEEEecCCCCEEEEEeCCC-CHHHHHHHhcCCCCEeehH
Confidence 4555678999999987 563 13456789999999999999999888777787654 59999999988 9999999
Q ss_pred HHHHHHHhcccCCCCCCCC
Q 000938 1198 WVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1198 WLedCl~~wkRVDEsdYlL 1216 (1218)
||.+|+..++.+|.+.|.+
T Consensus 77 Wv~Dci~~~~llp~~p~~~ 95 (263)
T 3ii6_X 77 WLLECFKTKSFVPWQPRFM 95 (263)
T ss_dssp HHHHHHHHTSCCCCCGGGE
T ss_pred HHHHHHhcCCcCCCCHHHH
Confidence 9999999999999887754
No 32
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=98.84 E-value=7.5e-09 Score=98.87 Aligned_cols=78 Identities=14% Similarity=0.104 Sum_probs=69.5
Q ss_pred hhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCC-HHHHHHHHcCCcEEcHHHHHHH
Q 000938 1124 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGT-DKVNWALSTGRFVVHPGWVEAS 1202 (1218)
Q Consensus 1124 RrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gT-eKVk~Alk~GIkIVSPdWLedC 1202 (1218)
...+|.|.+|||+|.++.. .+.++..+++.+||+|...|+.+++||||....+ .|+.+|.+.||+||+.+|+.++
T Consensus 29 ~~~~l~G~~~v~TG~l~~~----~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~g~sK~~kA~~lgI~Ii~E~~f~~l 104 (109)
T 2k6g_A 29 AENCLEGLIFVITGVLESI----ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNL 104 (109)
T ss_dssp CTTTTTTCEEEEESBCSSC----CHHHHHHHHHHTTCEEESSCCTTCCEEEECBCCCHHHHHHHHHHTCEEECHHHHHHH
T ss_pred CCCCCCCCEEEEeeeCCCC----CHHHHHHHHHHcCCEeeCcccCCceEEEECCCCChHHHHHHHHcCCeEEeHHHHHHH
Confidence 3457999999999998542 3678999999999999999999999999997655 9999999999999999999999
Q ss_pred HHh
Q 000938 1203 ALL 1205 (1218)
Q Consensus 1203 l~~ 1205 (1218)
+..
T Consensus 105 l~~ 107 (109)
T 2k6g_A 105 IRN 107 (109)
T ss_dssp HHH
T ss_pred HHh
Confidence 865
No 33
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=1.2e-08 Score=98.13 Aligned_cols=77 Identities=16% Similarity=0.153 Sum_probs=69.0
Q ss_pred hhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCC-CCHHHHHHHHcCCcEEcHHHHHHHH
Q 000938 1125 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL-GTDKVNWALSTGRFVVHPGWVEASA 1203 (1218)
Q Consensus 1125 rqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~-gTeKVk~Alk~GIkIVSPdWLedCl 1203 (1218)
..+|.|.+|||+|.+.. -.|.+++.+++.+||+|...|+.+++|||+... ++.|+++|+++||+||+.+||.+++
T Consensus 20 ~~~l~G~~~v~TG~l~~----~~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~g~sKl~KA~~lgI~IisE~~f~~ll 95 (112)
T 2ebu_A 20 ENCLEGLIFVITGVLES----IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLI 95 (112)
T ss_dssp SSSSTTCEEEECSCCSS----SCHHHHHHHHHHTTCEECSSCCSSCCEEEECSSCCSHHHHHHHHHTCEEEEHHHHHHHH
T ss_pred CCCcCCCEEEEeeeCCC----CCHHHHHHHHHHcCCEEeccccCCeeEEEecCCCChHHHHHHHHcCCeEEeHHHHHHHH
Confidence 45799999999999853 246789999999999999999999999999975 4499999999999999999999998
Q ss_pred Hh
Q 000938 1204 LL 1205 (1218)
Q Consensus 1204 ~~ 1205 (1218)
..
T Consensus 96 ~~ 97 (112)
T 2ebu_A 96 RT 97 (112)
T ss_dssp HH
T ss_pred hh
Confidence 74
No 34
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=98.77 E-value=1.9e-09 Score=113.81 Aligned_cols=90 Identities=16% Similarity=0.082 Sum_probs=52.0
Q ss_pred HhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCC--H----HHHHHHHc-------
Q 000938 1123 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGT--D----KVNWALST------- 1189 (1218)
Q Consensus 1123 iRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gT--e----KVk~Alk~------- 1189 (1218)
....+|+||+++|+|..+.. ....+..++..+||++..+++..+||||+...+. . +++..+..
T Consensus 156 ~~~~lF~g~~~yl~~~~~~~----~~~~l~~~i~~~GG~v~~~l~~~t~hVV~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (264)
T 1z56_C 156 FPLFLFSNRIAYVPRRKIST----EDDIIEMKIKLFGGKITDQQSLCNLIIIPYTDPILRKDCMNEVHEKIKEQIKASDT 231 (264)
T ss_dssp CCCC------------------------CHHHHHHHTTSCCCCSSSCSEEECCCSSTTTHHHHSSHHHHTTTTTTTSSSS
T ss_pred CchhhhCCeEEEEecCCCch----hHHHHHHHHHHcCCEEecccCCCEEEEEeCCCccchHHHHHHHHHHHHhhcccccc
Confidence 34568999999999964321 2334567799999999999997788888754332 2 23332221
Q ss_pred --CC-cEEcHHHHHHHHHhcccCCCCCCCC
Q 000938 1190 --GR-FVVHPGWVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1190 --GI-kIVSPdWLedCl~~wkRVDEsdYlL 1216 (1218)
++ +||+++||++|+..++++||..|.+
T Consensus 232 ~~~~~~iV~~~Wv~dci~~~~ll~e~~Y~~ 261 (264)
T 1z56_C 232 IPKIARVVAPEWVDHSINENCQVPEEDFPV 261 (264)
T ss_dssp CCCCCEEECTHHHHHHHTTSCCCSSCCC--
T ss_pred cCCCCEEecHHHHHHHHHcCCcCCHHHcCC
Confidence 34 9999999999999999999999975
No 35
>2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=1.4e-08 Score=95.60 Aligned_cols=80 Identities=23% Similarity=0.373 Sum_probs=65.2
Q ss_pred hhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecc-----------cCCCccEEEeCCCCCHHHHHHHHcCCcE
Q 000938 1125 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKH-----------IDDQVTHVVANSLGTDKVNWALSTGRFV 1193 (1218)
Q Consensus 1125 rqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssd-----------Vd~kVTHLVAss~gTeKVk~Alk~GIkI 1193 (1218)
..+|+||++++++-.| +..|..+++.+||.+..+ .+..+||+|+.++...+ +..+..+
T Consensus 10 ~~LF~g~~F~i~~e~p-------~~~le~~I~~~GG~v~~~~~~~~g~~~~~~~~~iTh~I~drp~~~~----~~~~r~~ 78 (100)
T 2ep8_A 10 KKLFEGLKFFLNREVP-------REALAFIIRSFGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQT----SVIGRCY 78 (100)
T ss_dssp CCTTSSCEEECCSSSC-------HHHHHHHHHHTTCEEECCTTTSSCCCSCTTCTTCCEEECSCTTTSC----CBTTBEE
T ss_pred HHHcCCcEEEEecCCC-------HHHHHHHHHHcCCEEEeccccccCcccccCCCceEEEEecccchhh----hcCCCeE
Confidence 4689999999987443 357888899999999876 25799999998754322 2256799
Q ss_pred EcHHHHHHHHHhcccCCCCCCC
Q 000938 1194 VHPGWVEASALLYRRANEQDFA 1215 (1218)
Q Consensus 1194 VSPdWLedCl~~wkRVDEsdYl 1215 (1218)
|.|+||+||+...+.+++.+|.
T Consensus 79 VqPqWV~Dcin~~~lLp~~~Y~ 100 (100)
T 2ep8_A 79 VQPQWVFDSVNARLLLPVAEYF 100 (100)
T ss_dssp ECTHHHHHHHHHTSCCCTTTCC
T ss_pred EcchHHHHHHhcCCcCChhhcC
Confidence 9999999999999999999995
No 36
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=98.68 E-value=1.2e-08 Score=98.23 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=64.4
Q ss_pred hhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCC---CCCHHHHHHHHcCCcEEcHHHHHH
Q 000938 1125 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS---LGTDKVNWALSTGRFVVHPGWVEA 1201 (1218)
Q Consensus 1125 rqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss---~gTeKVk~Alk~GIkIVSPdWLed 1201 (1218)
..+|.|++|+|+|.+.. .+.++.++++.+||+|...|+.+++|||+.. ..+.|+++|++.||+||+.+||.+
T Consensus 8 ~~~l~G~~~ViTG~l~~-----~R~e~k~~ie~~Ggkv~~sVskkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~~l~~ 82 (113)
T 2cok_A 8 DKPLSNMKILTLGKLSR-----NKDEVKAMIEKLGGKLTGTANKASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQD 82 (113)
T ss_dssp CCSSSSCEEEECSCCSS-----CHHHHHHHHHHTTCEEESCSTTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTHHHHH
T ss_pred CCCcCCCEEEEEecCCC-----CHHHHHHHHHHCCCEEcCccccCccEEEECCCCCCCChHHHHHHHCCCcEEeHHHHHH
Confidence 35799999999998843 3678999999999999999999999999984 367899999999999999999555
Q ss_pred HH
Q 000938 1202 SA 1203 (1218)
Q Consensus 1202 Cl 1203 (1218)
|.
T Consensus 83 ~~ 84 (113)
T 2cok_A 83 VS 84 (113)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 37
>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.59 E-value=8.1e-08 Score=93.53 Aligned_cols=87 Identities=14% Similarity=0.077 Sum_probs=64.8
Q ss_pred hhccCceeeeeccccCCCCCCCCch-HHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHH-------cCCcEEcHH
Q 000938 1126 KILAGCRIVFSRVFPVGEANPHLHP-LWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALS-------TGRFVVHPG 1197 (1218)
Q Consensus 1126 qILkGCvIvFSGIfP~g~~nPer~~-LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk-------~GIkIVSPd 1197 (1218)
..|+||+|+|-.. .. ...+.. +.+++..+||+|.+++++.|||||+.+...+.+..-++ .+.+||+..
T Consensus 19 ~~F~g~~iy~v~~---~~-g~~R~~~l~~l~r~~G~~V~~~ls~~VTHVVve~~~~~e~~~~l~~~~l~~~~~~~lv~i~ 94 (120)
T 2coe_A 19 IKFQDLVVFILEK---KM-GTTRRALLMELARRKGFRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVS 94 (120)
T ss_dssp CSCTTCEEEEECT---TT-CHHHHHHHHHHHHHHTCEECSSCCTTCCEEEESSCCHHHHHHHHHHCCCCCSSCCEEEEHH
T ss_pred cccCCeEEEEeec---cc-chHHHHHHHHHHHHcCCEEeeccCCCcCEEEecCCCHHHHHHHHhccccccccccEEeecH
Confidence 5799999998432 21 112233 55789999999999999999999997554433432222 256899999
Q ss_pred HHHHHHHhcccCCCCCCCC
Q 000938 1198 WVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1198 WLedCl~~wkRVDEsdYlL 1216 (1218)
||.+|++..+.++|..|..
T Consensus 95 Wl~esmk~g~lv~ee~~~~ 113 (120)
T 2coe_A 95 WLIECIGAGKPVEMTGKHQ 113 (120)
T ss_dssp HHHHHHHTTSCCCCSSSSB
T ss_pred HHHHHHHcCCccCcccceE
Confidence 9999999999999977654
No 38
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=98.52 E-value=1.2e-08 Score=107.68 Aligned_cols=91 Identities=15% Similarity=0.105 Sum_probs=69.8
Q ss_pred hhhccCceeee-eccccC-CCCCCCCchHHHHHHHhCCEEecccCCC-----ccEEEeCCCCCHHHHHHHHcCCcEEcHH
Q 000938 1125 RKILAGCRIVF-SRVFPV-GEANPHLHPLWQTAEQFGAVCTKHIDDQ-----VTHVVANSLGTDKVNWALSTGRFVVHPG 1197 (1218)
Q Consensus 1125 rqILkGCvIvF-SGIfP~-g~~nPer~~LwkLAeqLGAtVssdVd~k-----VTHLVAss~gTeKVk~Alk~GIkIVSPd 1197 (1218)
.++|+||+||+ +|.+.. ......++.|.+++..+||++....... .||+|+.. .|.|++.+++.|++||+|+
T Consensus 3 s~lF~g~~f~v~~~~~~p~~~~~~~~~~L~~li~~~GG~~~~~~~~~t~~~~~~~iI~~~-~t~k~~~~~~~~~~vV~p~ 81 (264)
T 1z56_C 3 SNIFAGLLFYVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCK-TTTECKALIDRGYDILHPN 81 (264)
T ss_dssp CCCCCTTCCCCSEEEECCCCCSSSSCCCTHHHHHHHHTTSCCCSSCCCCCSSCCEEEECS-CCGGGGGGTTTTCCCBCSS
T ss_pred cccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHcCCEEeecCCCCccCccceEEEecC-CcHHHHHHHhCCCCEEech
Confidence 46899999976 675421 0001245789999999999887654433 36777754 6788888888889999999
Q ss_pred HHHHHHHhcccCCCCCCCC
Q 000938 1198 WVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1198 WLedCl~~wkRVDEsdYlL 1216 (1218)
||.+|+..++.++.+.|.+
T Consensus 82 Wv~dci~~~~llp~~~y~~ 100 (264)
T 1z56_C 82 WVLDCIAYKRLILIEPNYC 100 (264)
T ss_dssp TTHHHHSSCSCCCCCSCBS
T ss_pred HHHHHhhcCCCCCCChHHh
Confidence 9999999999999998854
No 39
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=98.49 E-value=1.1e-07 Score=97.78 Aligned_cols=91 Identities=18% Similarity=0.165 Sum_probs=63.0
Q ss_pred HhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCC-----CccEEEeCCC----CCHHHHH-HHHcCCc
Q 000938 1123 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD-----QVTHVVANSL----GTDKVNW-ALSTGRF 1192 (1218)
Q Consensus 1123 iRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~-----kVTHLVAss~----gTeKVk~-Alk~GIk 1192 (1218)
.+..+|.||.|+|.|-+.. +.+..|..+++..||+|...+.. .+||+|+... ...+++. |.+.|++
T Consensus 113 ~~~~lF~g~~~~~~~~~~~----~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~l~~~~~i~ 188 (229)
T 1l0b_A 113 SQEKLFEGLQIYCCEPFTN----MPKDELERMLQLCGASVVKELPLLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGR 188 (229)
T ss_dssp HC--CCTTCEEEECSCCSS----SCHHHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC-------------------C
T ss_pred hhhhhhcCceEEEEecCCC----CCHHHHHHHHHHCCCEEeCCcccccccCCCceEEEEcCCccchhhhHHHHHHHcCCe
Confidence 4568999999999885432 34678999999999999998865 3688655442 2345553 3557999
Q ss_pred EEcHHHHHHHHHhcccCCCCCCCCC
Q 000938 1193 VVHPGWVEASALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1193 IVSPdWLedCl~~wkRVDEsdYlL~ 1217 (1218)
||+++||++|+..++.+++..|+|.
T Consensus 189 iVs~~WlldsI~~~~~~~~~~Y~l~ 213 (229)
T 1l0b_A 189 LVMWDWVLDSISVYRCRDLDAYLVQ 213 (229)
T ss_dssp EEETHHHHHHHHTTSCCCGGGGBCC
T ss_pred EeehhHHHHHHhcCCcCCccceEcc
Confidence 9999999999999999999999884
No 40
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=98.41 E-value=1.1e-07 Score=96.31 Aligned_cols=90 Identities=23% Similarity=0.252 Sum_probs=69.4
Q ss_pred hhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCC-----ccEEEeCCCC----CHHHH-HHHHcCCcE
Q 000938 1124 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQ-----VTHVVANSLG----TDKVN-WALSTGRFV 1193 (1218)
Q Consensus 1124 RrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~k-----VTHLVAss~g----TeKVk-~Alk~GIkI 1193 (1218)
+.++|+|++|+|+|-+. .+.+..+..+++.+||++..++... ++|+|+.... ..|++ .|.+.|++|
T Consensus 112 ~~~lF~g~~~~~~~~~~----~~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~ivi~~~~~~~~~~~~~~~a~~~~~~i 187 (214)
T 1t15_A 112 DRKIFRGLEICCYGPFT----NMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPV 187 (214)
T ss_dssp TSCTTTTCEEEECSCCS----SSCHHHHHHHHHHTTCEECCSGGGCCCSTTCCEEEEECGGGCSSCGGGGSSTTTCSSCE
T ss_pred CCcccCCCEEEEEecCC----CCCHHHHHHHHHHCCCEEecCccccccCCCCccEEEECCCcccchhhHHHHHHhcCCcE
Confidence 56799999999988543 2346789999999999999988652 2345554322 22443 456689999
Q ss_pred EcHHHHHHHHHhcccCCCCCCCCC
Q 000938 1194 VHPGWVEASALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1194 VSPdWLedCl~~wkRVDEsdYlL~ 1217 (1218)
|+++||.+|+..++.+++..|++.
T Consensus 188 V~~~Wi~dsi~~~~~l~~~~Y~l~ 211 (214)
T 1t15_A 188 VTREWVLDSVALYQCQELDTYLIP 211 (214)
T ss_dssp EEHHHHHHHHHHTSCCCSGGGBCC
T ss_pred EeccHHHHhHhhcCcCCCcceeec
Confidence 999999999999999999999874
No 41
>3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A*
Probab=98.41 E-value=2.1e-07 Score=86.42 Aligned_cols=74 Identities=20% Similarity=0.244 Sum_probs=61.2
Q ss_pred hhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCC-CccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHHH
Q 000938 1125 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD-QVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASA 1203 (1218)
Q Consensus 1125 rqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~-kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLedCl 1203 (1218)
..+|.||++++.+-+|. ...|.+++.++||.+..+.+. +|||+|+... ...+..+|+|+||++|+
T Consensus 14 pdiFsg~~~~l~~~v~~------~~~l~RyiiAfgG~v~~~~~~~~vTHvI~~~~--------~~~~~~~V~p~WI~dcI 79 (88)
T 3pc7_A 14 LDIFTGVRLYLPPSTPD------FSRLRRYFVAFDGDLVQEFDMTSATHVLGSRD--------KNPAAQQVSPEWIWACI 79 (88)
T ss_dssp CCCSTTCEECCCTTSTT------HHHHHHHHHHTTCEECCGGGGGGCSEEESCCT--------TCTTSEEECHHHHHHHH
T ss_pred ChhhcCeEEEccCCcCc------hhhheeeeeecCCEEecccCCCcCeEEecCCC--------cCCCCcEEchHHHHHHH
Confidence 45899999999775542 246888999999999888875 9999997663 35688999999999999
Q ss_pred HhcccCCCC
Q 000938 1204 LLYRRANEQ 1212 (1218)
Q Consensus 1204 ~~wkRVDEs 1212 (1218)
...+.++++
T Consensus 80 ~k~~Ll~~~ 88 (88)
T 3pc7_A 80 RKRRLVAPS 88 (88)
T ss_dssp HHTSCCSCC
T ss_pred hCCcccCCC
Confidence 999988753
No 42
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=98.24 E-value=4.2e-07 Score=93.61 Aligned_cols=82 Identities=13% Similarity=0.172 Sum_probs=65.9
Q ss_pred hhhhccCce-eeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHH
Q 000938 1124 QRKILAGCR-IVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEAS 1202 (1218)
Q Consensus 1124 RrqILkGCv-IvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLedC 1202 (1218)
+.++|+|+. ++++++. .+.+..|+.+++.+||+|..++. .++++|+.... ++..+++||+|+||.||
T Consensus 116 ~~~LF~g~~~~~v~~~~-----~~~~~~L~~lI~~~GG~v~~~~~-~~~iiI~~~~~------~~~~~~~~V~p~Wi~Ds 183 (199)
T 3u3z_A 116 RGTLFADQPVMFVSPAS-----SPPVAKLCELVHLCGGRVSQVPR-QASIVIGPYSG------KKKATVKYLSEKWVLDS 183 (199)
T ss_dssp CCCTTTTSCCEEECTTC-----SSCHHHHHHHHHHTTCCBCSSGG-GCSEEESCCCS------CCCTTCEEECHHHHHHH
T ss_pred cchhhCCCeEEEECCCC-----CCCHHHHHHHHHHcCCEEeccCC-CCEEEEeCCch------hccCCCcEEChhHHHHH
Confidence 578999995 5556542 34467899999999999999884 56777765332 34578999999999999
Q ss_pred HHhcccCCCCCCCCC
Q 000938 1203 ALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1203 l~~wkRVDEsdYlL~ 1217 (1218)
+..++.+|+.+|++.
T Consensus 184 I~~~~llp~~~Y~~~ 198 (199)
T 3u3z_A 184 ITQHKVCAPENYLLS 198 (199)
T ss_dssp HHHTSCCCGGGGBCC
T ss_pred HHcCCcCChHhccCC
Confidence 999999999999873
No 43
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=98.07 E-value=5.2e-06 Score=85.54 Aligned_cols=89 Identities=17% Similarity=0.276 Sum_probs=70.1
Q ss_pred hhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCc--cEEEeCC-CCCHHHHHHHHcCCcEEcHHHHH
Q 000938 1124 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQV--THVVANS-LGTDKVNWALSTGRFVVHPGWVE 1200 (1218)
Q Consensus 1124 RrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kV--THLVAss-~gTeKVk~Alk~GIkIVSPdWLe 1200 (1218)
+.++|+|++|+|++.+. +....+..+++..||+|........ +|+|... ....+++.+.+.|++||+++||.
T Consensus 112 ~~~lF~g~~~~~~~~~~-----~~~~~l~~li~~~GG~v~~~~~~~~~~~~ivI~~~~d~~~~~~~~~~~i~vvs~eWi~ 186 (209)
T 2etx_A 112 ERRLLEGYEIYVTPGVQ-----PPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQDFPHCSIPLRVGLPLLSPEFLL 186 (209)
T ss_dssp HSCTTTTCEEEECTTCS-----SCHHHHHHHHHHTTCEECSSCCCSCCTTEEEECCGGGGGGCHHHHHHTCCEECTHHHH
T ss_pred hCCCcCCcEEEEeCCCC-----CCHHHHHHHHHHCCCEEECCCCCCCCCceEEEECcccHHHHHHHHHCCCeEEcHHHHH
Confidence 34799999999987542 3356788999999999998886543 6777653 33446677888999999999999
Q ss_pred HHHHhcccCCCCCCCCCC
Q 000938 1201 ASALLYRRANEQDFAIKP 1218 (1218)
Q Consensus 1201 dCl~~wkRVDEsdYlL~p 1218 (1218)
+|+.. .+++++.|.|.+
T Consensus 187 ~sI~~-q~ld~e~y~l~~ 203 (209)
T 2etx_A 187 TGVLK-QEAKPEAFVLSP 203 (209)
T ss_dssp HHHHH-TCCCGGGGBCCT
T ss_pred HHHHh-cccChHHheecC
Confidence 99997 457999998853
No 44
>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=98.06 E-value=4.8e-06 Score=82.55 Aligned_cols=88 Identities=15% Similarity=0.081 Sum_probs=65.2
Q ss_pred hhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHH-H----HH-----HcCCcEEc
Q 000938 1126 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVN-W----AL-----STGRFVVH 1195 (1218)
Q Consensus 1126 qILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk-~----Al-----k~GIkIVS 1195 (1218)
..|.||+|++-+.-.. .-.+.-|.++|.+.|+.+...+.+.|||||+-+...+-+. | .. ..+..+|+
T Consensus 9 ~~F~~v~iyive~kmG---~sRr~fL~~la~~kGf~v~~~~S~~VTHVV~E~~s~~~~~~~L~~~~~~l~~~~~~~~lLd 85 (133)
T 2dun_A 9 TRFPGVAIYLVEPRMG---RSRRAFLTGLARSKGFRVLDACSSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLD 85 (133)
T ss_dssp CSEEEEEEEECHHHHC---SHHHHHHHHHHHHHTEEECSSCCTTCCEEEESSCCHHHHHHHHHHHHHHSCTTCCCCEEEE
T ss_pred cccCccEEEEecCCcC---HHHHHHHHHHHHhcCCEeccccCCCceEEEecCCCHHHHHHHHHHhhcccCcCCCCcEEec
Confidence 3589999988654221 1123447789999999999999999999999654443222 1 11 14578999
Q ss_pred HHHHHHHHHhcccCCCCCCCC
Q 000938 1196 PGWVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1196 PdWLedCl~~wkRVDEsdYlL 1216 (1218)
..||.+|+...+.++|..|.+
T Consensus 86 isWltecm~~g~pV~~e~~~~ 106 (133)
T 2dun_A 86 ISWLTESLGAGQPVPVECRHR 106 (133)
T ss_dssp HHHHHHHHHHTSCCCCCTTTS
T ss_pred cHHHHHHHhcCCcCCcccceE
Confidence 999999999999999976643
No 45
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=97.99 E-value=4.9e-06 Score=89.00 Aligned_cols=87 Identities=16% Similarity=0.166 Sum_probs=65.5
Q ss_pred hhhhccCceeeeeccccCCCCCCCCchHH-HHHHHhCCEEecccC---------CCccEEEeCCC--CCHHHHHHHHcCC
Q 000938 1124 QRKILAGCRIVFSRVFPVGEANPHLHPLW-QTAEQFGAVCTKHID---------DQVTHVVANSL--GTDKVNWALSTGR 1191 (1218)
Q Consensus 1124 RrqILkGCvIvFSGIfP~g~~nPer~~Lw-kLAeqLGAtVssdVd---------~kVTHLVAss~--gTeKVk~Alk~GI 1191 (1218)
+.++|+|++|++++.... ....+| .+++.+||++...+. ...+|+|..+. ...+++.|.++|+
T Consensus 152 ~~~LF~G~~I~i~~~~~~-----~~~~~~~~Il~~~Ga~vv~~~~s~~~~~d~~~~~~~viv~d~~~~~~~~~~a~~~~i 226 (259)
T 1kzy_C 152 RENPFQNLKVLLVSDQQQ-----NFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQL 226 (259)
T ss_dssp CCCTTTTCEEEEEESCTT-----TTHHHHHHHHHHTTCSEEEEEESSSSCCCSCGGGCSEEEECTTCCHHHHHHHHHHTC
T ss_pred cCCCCCCeEEEEecCCCC-----CHHHHHHHHHHhcCCEEEeccccchhhhhccCCCCeEEEECCCChHHHHHHHHhcCC
Confidence 468999999999886421 123455 488999999877663 24555555542 2456778899999
Q ss_pred cEEcHHHHHHHHHhcccCCCCCCC
Q 000938 1192 FVVHPGWVEASALLYRRANEQDFA 1215 (1218)
Q Consensus 1192 kIVSPdWLedCl~~wkRVDEsdYl 1215 (1218)
+||+.+||.+|+...+.+++..++
T Consensus 227 ~iVs~EWv~~sI~~~~ll~~~~hp 250 (259)
T 1kzy_C 227 PVVSQEWVIQCLIVGERIGFKQHP 250 (259)
T ss_dssp CEECHHHHHHHHHHTSCCCTTSSG
T ss_pred CEecHHHHHHHHHhCCcCCCCcCc
Confidence 999999999999999999988653
No 46
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=97.88 E-value=4.9e-06 Score=85.13 Aligned_cols=84 Identities=10% Similarity=0.080 Sum_probs=63.7
Q ss_pred hhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEeccc-----------------------CCCccEEEeCCCCC
Q 000938 1124 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHI-----------------------DDQVTHVVANSLGT 1180 (1218)
Q Consensus 1124 RrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdV-----------------------d~kVTHLVAss~gT 1180 (1218)
+.++|.||.|+|+|-+. .+.+..|.++++..||++.... ++.|||+|...++.
T Consensus 101 ~~~lF~g~~~~l~~~~~----~~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~~t~~iv~~~~~ 176 (210)
T 2nte_A 101 LPKLFDGCYFYLWGTFK----HHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLC 176 (210)
T ss_dssp CCCTTTTCEEEECSCCS----SSCHHHHHHHHHHTTCEEESSCCCGGGCGGGSSCCCCTTSCTTCGGGTCCEEEEECSCS
T ss_pred cccccCceEEEEeccCC----CCCHHHHHHHHHHCCCEEEecCCCCccccccccceeeeccCCCcccccceEEEEecccc
Confidence 36799999999998542 2346789999999999998521 14679999887542
Q ss_pred HHH--HHHHHcCCcEEcHHHHHHHHHhcccCCCC
Q 000938 1181 DKV--NWALSTGRFVVHPGWVEASALLYRRANEQ 1212 (1218)
Q Consensus 1181 eKV--k~Alk~GIkIVSPdWLedCl~~wkRVDEs 1212 (1218)
|+ ..|...++++|+++||++|+..++.+|..
T Consensus 177 -~~~~~~~~~~~v~~V~~~Wl~dcI~~~~llp~~ 209 (210)
T 2nte_A 177 -NYHPERVRQGKVWKAPSSWFIDCVMSFELLPLD 209 (210)
T ss_dssp -SCCCSCSEETTEEEEEHHHHHHHHHHTSCCCSC
T ss_pred -ccCHHHHhccCcccccHHHHHHHHHhCeeccCC
Confidence 22 22444678999999999999999988854
No 47
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=97.87 E-value=3.2e-06 Score=101.46 Aligned_cols=76 Identities=14% Similarity=0.084 Sum_probs=0.0
Q ss_pred hhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHHHH
Q 000938 1125 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASAL 1204 (1218)
Q Consensus 1125 rqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLedCl~ 1204 (1218)
..+|.|.+|||||.+.. .+.++..+++.+||+|+..|++++++||+....+.|+++|.+.||+|++.+|+.+.+.
T Consensus 585 ~~~l~G~~~v~TG~l~~-----~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~gsKl~KA~~lgI~Ii~E~~f~~~l~ 659 (667)
T 1dgs_A 585 SDLLSGLTFVLTGELSR-----PREEVKALLGRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVAVLTEEEFWRFLK 659 (667)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCEEEEeCCCCC-----CHHHHHHHHHHcCCEEcCcccCCeeEEEECCCCChHHHHHHHCCCeEEeHHHHHHHHh
Confidence 45799999999999854 3678899999999999999999999999998778999999999999999999999886
Q ss_pred h
Q 000938 1205 L 1205 (1218)
Q Consensus 1205 ~ 1205 (1218)
.
T Consensus 660 ~ 660 (667)
T 1dgs_A 660 E 660 (667)
T ss_dssp -
T ss_pred c
Confidence 4
No 48
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=97.81 E-value=5.1e-06 Score=99.85 Aligned_cols=76 Identities=14% Similarity=0.073 Sum_probs=0.0
Q ss_pred hhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHHHH
Q 000938 1125 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASAL 1204 (1218)
Q Consensus 1125 rqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLedCl~ 1204 (1218)
..+|.|.+|||||.++.- .+.++..+++.+||+|+..|++++++||+....+.|+++|.+.||+|++.+|+.+++.
T Consensus 595 ~~~l~G~~~v~TG~l~~~----~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~gsKl~KA~~lgI~Ii~E~~f~~~l~ 670 (671)
T 2owo_A 595 DSPFAGKTVVLTGSLSQM----SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccCcEEEEcCCCCCC----CHHHHHHHHHHcCCEEeCcccCceeEEEECCCCChHHHHHHHCCCcEEcHHHHHHHhc
Confidence 357999999999998541 3678899999999999999999999999998878999999999999999999988763
No 49
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=97.28 E-value=0.00039 Score=67.86 Aligned_cols=86 Identities=15% Similarity=0.202 Sum_probs=60.1
Q ss_pred EEEEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceee-eeeeecCCCCCCCCCCCCCCcccccccccC
Q 000938 955 MWTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRGDDGDPFDGDERVPKSKDLEGVLG 1032 (1218)
Q Consensus 955 ~YVKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~-~RIySRDdc~~~~dG~Er~~yiKDLsrVLG 1032 (1218)
..+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|. ..+++.+. . ..... . ..++-+...+|
T Consensus 67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~i~~~~~-~-~~kp~-~-~~~~~~~~~~g 141 (205)
T 3m9l_A 67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD-CFAEADVLGRDE-A-PPKPH-P-GGLLKLAEAWD 141 (205)
T ss_dssp EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GSCGGGEECTTT-S-CCTTS-S-HHHHHHHHHTT
T ss_pred hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchh-hcCcceEEeCCC-C-CCCCC-H-HHHHHHHHHcC
Confidence 3478999999999999875 9999999999999999999887554 563 34665432 1 11110 0 12233333467
Q ss_pred CC-CcEEEEeCCCC
Q 000938 1033 ME-SAVVIIDDSVR 1045 (1218)
Q Consensus 1033 RD-srVVIVDDspd 1045 (1218)
.+ +.+|.|+|+..
T Consensus 142 ~~~~~~i~iGD~~~ 155 (205)
T 3m9l_A 142 VSPSRMVMVGDYRF 155 (205)
T ss_dssp CCGGGEEEEESSHH
T ss_pred CCHHHEEEECCCHH
Confidence 76 89999999874
No 50
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=97.27 E-value=0.00048 Score=72.18 Aligned_cols=88 Identities=9% Similarity=0.055 Sum_probs=68.5
Q ss_pred HhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCC-------------CccEEEeCCCCCHHHHHHHHc
Q 000938 1123 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD-------------QVTHVVANSLGTDKVNWALST 1189 (1218)
Q Consensus 1123 iRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~-------------kVTHLVAss~gTeKVk~Alk~ 1189 (1218)
.+.++|+|+.|++++-+. +....+..+++..||+|...+-. ....||+.......++.+.+.
T Consensus 118 ~~~~LF~G~~f~it~~~~-----~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~~~~~~ivis~~~d~~~~~~~~~~ 192 (219)
T 3sqd_A 118 HVSPLFKAKYFYITPGIC-----PSLSTMKAIVECAGGKVLSKQPSFRKLMEHKQNSSLSEIILISCENDLHLCREYFAR 192 (219)
T ss_dssp HHSCTTTTEEEEECTTCS-----SCHHHHHHHHHHTTCEEESSCCCHHHHHHHHHCTTSCEEEEEECGGGGGGGHHHHHT
T ss_pred ccccccCCcEEEEeCCCC-----CCHHHHHHHHHHCCCEEECCCCchHHhhhhhcccCCCCEEEEecccHHHHHHHHHHC
Confidence 367899999999998543 33567899999999999988743 124555555666778888889
Q ss_pred CCcEEcHHHHHHHHHhcccCCCCCCCC
Q 000938 1190 GRFVVHPGWVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1190 GIkIVSPdWLedCl~~wkRVDEsdYlL 1216 (1218)
|++|++.+||..|+.+ .+++-+.|.+
T Consensus 193 ~~~v~s~E~il~~Il~-q~ld~~~~~~ 218 (219)
T 3sqd_A 193 GIDVHNAEFVLTGVLT-QTLDYESYKF 218 (219)
T ss_dssp TCCCEETHHHHHHHHH-TCCCTTTSBC
T ss_pred CCcEEeHHHHHHHHHh-eeecchhccc
Confidence 9999999999999994 5567777765
No 51
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.14 E-value=0.00058 Score=67.24 Aligned_cols=81 Identities=19% Similarity=0.153 Sum_probs=56.2
Q ss_pred EEEecCCHHHHHHHHhcc-ceEEEEcCCc-HHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCC
Q 000938 956 WTKLRPGIWTFLERASKL-FEMHLYTMGN-KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 1033 (1218)
Q Consensus 956 YVKlRPGLdEFLeeLSk~-YEIVIFTAGt-reYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGR 1033 (1218)
.+.+.|++.++|+.+.+. +.++|.|++. +.++..+++.++-.. +|..-++.. .. + ...+.+=++ .+|.
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~-~f~~~~~~~--~~---k---~~~~~~~~~-~~~~ 135 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR-YFVHREIYP--GS---K---ITHFERLQQ-KTGI 135 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT-TEEEEEESS--SC---H---HHHHHHHHH-HHCC
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh-hcceeEEEe--Cc---h---HHHHHHHHH-HcCC
Confidence 367899999999999865 9999999999 899999999887665 565422211 10 0 001222222 3566
Q ss_pred C-CcEEEEeCCCCc
Q 000938 1034 E-SAVVIIDDSVRV 1046 (1218)
Q Consensus 1034 D-srVVIVDDspdV 1046 (1218)
+ +.+|+|+|+..-
T Consensus 136 ~~~~~~~igD~~~D 149 (187)
T 2wm8_A 136 PFSQMIFFDDERRN 149 (187)
T ss_dssp CGGGEEEEESCHHH
T ss_pred ChHHEEEEeCCccC
Confidence 6 889999999643
No 52
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=97.05 E-value=0.00078 Score=66.60 Aligned_cols=83 Identities=13% Similarity=0.156 Sum_probs=56.5
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcH---HHHHHHHHHHcCCCceeeeeeeecCCCC---CCCCCCCCCCccccccc
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNK---LYATEMAKVLDPKGVLFAGRVISRGDDG---DPFDGDERVPKSKDLEG 1029 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtr---eYAd~VLdiLDP~g~LF~~RIySRDdc~---~~~dG~Er~~yiKDLsr 1029 (1218)
+.+.||+.++|+.|.+. |.++|.|++.. .++..+++.+.-.. +|.. ++..++.. ...+.+ +..+.+=+.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~-~fd~-i~~~~~~~~~~~~~KP~-p~~~~~~~~- 108 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID-YFDF-IYASNSELQPGKMEKPD-KTIFDFTLN- 108 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG-GEEE-EEECCTTSSTTCCCTTS-HHHHHHHHH-
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh-heEE-EEEccccccccCCCCcC-HHHHHHHHH-
Confidence 56889999999999875 99999999887 89999998887765 7764 66544321 111110 001112222
Q ss_pred ccCCC-CcEEEEeCC
Q 000938 1030 VLGME-SAVVIIDDS 1043 (1218)
Q Consensus 1030 VLGRD-srVVIVDDs 1043 (1218)
.+|.+ +.+|+|+|+
T Consensus 109 ~~~~~~~~~l~VGD~ 123 (189)
T 3ib6_A 109 ALQIDKTEAVMVGNT 123 (189)
T ss_dssp HHTCCGGGEEEEESB
T ss_pred HcCCCcccEEEECCC
Confidence 35666 899999999
No 53
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=97.01 E-value=0.0028 Score=62.67 Aligned_cols=113 Identities=14% Similarity=0.139 Sum_probs=68.0
Q ss_pred hcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhcc-ceEEE
Q 000938 900 FSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHL 978 (1218)
Q Consensus 900 Ls~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk~-YEIVI 978 (1218)
.....+++++|+|+||+..... . +.. ... -.+.+.||+.++|++|.+. |.++|
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~----~----~~~-----------------~~~-~~~~~~pg~~e~L~~L~~~G~~l~i 63 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPS----D----FQV-----------------DRF-DKLAFEPGVIPQLLKLQKAGYKLVM 63 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC------C----CCC-----------------CSG-GGCCBCTTHHHHHHHHHHTTEEEEE
T ss_pred cCCcCcEEEEeCCCCeEcCCCC----C----cCc-----------------CCH-HHCcCCccHHHHHHHHHHCCCEEEE
Confidence 4567889999999999976310 0 000 000 0245789999999999865 99999
Q ss_pred EcCC---------------cHHHHHHHHHHHcCCCceeeeeeee----cCCCCCCCCCCCCCCcccccccccCCC-CcEE
Q 000938 979 YTMG---------------NKLYATEMAKVLDPKGVLFAGRVIS----RGDDGDPFDGDERVPKSKDLEGVLGME-SAVV 1038 (1218)
Q Consensus 979 FTAG---------------treYAd~VLdiLDP~g~LF~~RIyS----RDdc~~~~dG~Er~~yiKDLsrVLGRD-srVV 1038 (1218)
.|++ .+.++..+++.+.-. |..-+++ .+++. ..+.. +..+.+=++ .+|.+ +.+|
T Consensus 64 ~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~-~~KP~-p~~~~~~~~-~~gi~~~~~l 137 (176)
T 2fpr_A 64 ITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECD-CRKPK-VKLVERYLA-EQAMDRANSY 137 (176)
T ss_dssp EEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCS-SSTTS-CGGGGGGC-----CCGGGCE
T ss_pred EECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCccccc-ccCCC-HHHHHHHHH-HcCCCHHHEE
Confidence 9999 688888888887654 6543344 12221 11111 111222233 35655 7899
Q ss_pred EEeCCC
Q 000938 1039 IIDDSV 1044 (1218)
Q Consensus 1039 IVDDsp 1044 (1218)
+|+|+.
T Consensus 138 ~VGD~~ 143 (176)
T 2fpr_A 138 VIGDRA 143 (176)
T ss_dssp EEESSH
T ss_pred EEcCCH
Confidence 999997
No 54
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=96.99 E-value=0.00052 Score=72.84 Aligned_cols=81 Identities=16% Similarity=0.130 Sum_probs=58.5
Q ss_pred HhhhhccCceeeeeccccCCCCCCC-----------CchHHHHHHHhCCEE--ecccCCCccEEEeCCCCCHHHHHHHHc
Q 000938 1123 EQRKILAGCRIVFSRVFPVGEANPH-----------LHPLWQTAEQFGAVC--TKHIDDQVTHVVANSLGTDKVNWALST 1189 (1218)
Q Consensus 1123 iRrqILkGCvIvFSGIfP~g~~nPe-----------r~~LwkLAeqLGAtV--ssdVd~kVTHLVAss~gTeKVk~Alk~ 1189 (1218)
-|..+|.|++|+|.+-.. ..+. ......+++.+||.+ ..+++...+|+|...... .|.++
T Consensus 147 ~~~~Lf~g~~i~~~~~~~---~~~~~~~~~~~~g~~~~~~~~i~~~~Ga~~~~v~~~~~~~~d~v~~~~~~----~~~~~ 219 (241)
T 2vxb_A 147 ARKGPLFGKKILFIIPEA---KSWQKKIENTEQGQKALAHVYHALALGADVEIRPNVAHLECDLILTMDGN----IVDET 219 (241)
T ss_dssp HCCCTTTTCEEEECCCC---------------CHHHHHHHHHHHHHTTCEEECCSCCSSCCCSEEECSSSC----CCSSC
T ss_pred hcCcCCCCcEEEEEeCCC---cccccccccccccchHHHHHHHHHHcCCceecccccccCCccEEEECCcc----ccccC
Confidence 467899999998864210 0010 123445789999999 556666778999875433 25678
Q ss_pred CCcEEcHHHHHHHHHhcccCC
Q 000938 1190 GRFVVHPGWVEASALLYRRAN 1210 (1218)
Q Consensus 1190 GIkIVSPdWLedCl~~wkRVD 1210 (1218)
+++||+++||.+|+...++++
T Consensus 220 ~~~iV~~eWv~~~i~~g~~l~ 240 (241)
T 2vxb_A 220 NCPVVDPEWIVECLISQSDIS 240 (241)
T ss_dssp SSCEECHHHHHHHHHHTSCTT
T ss_pred CCCEecHHHHHHHHHhceecC
Confidence 999999999999999999886
No 55
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=96.79 E-value=0.00087 Score=64.03 Aligned_cols=84 Identities=21% Similarity=0.141 Sum_probs=58.7
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|.. +++.++... .... + ..++-+...+|.+
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 157 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YFDV-MVFGDQVKN-GKPD-P-EIYLLVLERLNVVP 157 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECGGGSSS-CTTS-T-HHHHHHHHHHTCCG
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHH-hcCE-EeecccCCC-CCcC-c-HHHHHHHHHcCCCC
Confidence 67899999999999876 9999999999999999999887654 6654 444433211 1110 0 1122233345766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.++.|+|+..
T Consensus 158 ~~~i~iGD~~~ 168 (216)
T 2pib_A 158 EKVVVFEDSKS 168 (216)
T ss_dssp GGEEEEECSHH
T ss_pred ceEEEEeCcHH
Confidence 88999999974
No 56
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=96.79 E-value=0.00089 Score=65.18 Aligned_cols=88 Identities=14% Similarity=0.241 Sum_probs=57.3
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCC------CCCCCCCCCCCCccccccc
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD------DGDPFDGDERVPKSKDLEG 1029 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDd------c~~~~dG~Er~~yiKDLsr 1029 (1218)
+..+|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|...+...+. +.....+......++-+..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~ 152 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDA-AFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQR 152 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcch-hccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHH
Confidence 56899999999999876 9999999999999999999987654 67654321110 0000001000001122222
Q ss_pred ccCCC-CcEEEEeCCCC
Q 000938 1030 VLGME-SAVVIIDDSVR 1045 (1218)
Q Consensus 1030 VLGRD-srVVIVDDspd 1045 (1218)
.+|.+ +.+|.|+|++.
T Consensus 153 ~~g~~~~~~i~vGDs~~ 169 (217)
T 3m1y_A 153 LLNISKTNTLVVGDGAN 169 (217)
T ss_dssp HHTCCSTTEEEEECSGG
T ss_pred HcCCCHhHEEEEeCCHH
Confidence 35666 78999999974
No 57
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=96.78 E-value=0.0025 Score=62.83 Aligned_cols=85 Identities=19% Similarity=0.195 Sum_probs=58.9
Q ss_pred EEEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC
Q 000938 956 WTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1034 (1218)
Q Consensus 956 YVKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD 1034 (1218)
.+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|.. ++..++... .+.. + ..++-+...+|.+
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~~~~~~~~-~Kp~-~-~~~~~~~~~lgi~ 175 (231)
T 3kzx_A 101 NFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTH-YFDS-IIGSGDTGT-IKPS-P-EPVLAALTNINIE 175 (231)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEETSSSC-CTTS-S-HHHHHHHHHHTCC
T ss_pred cceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchh-heee-EEcccccCC-CCCC-h-HHHHHHHHHcCCC
Confidence 367899999999999875 9999999999999999999877554 5654 554443221 1110 0 1122333345765
Q ss_pred -C-cEEEEeCCCC
Q 000938 1035 -S-AVVIIDDSVR 1045 (1218)
Q Consensus 1035 -s-rVVIVDDspd 1045 (1218)
+ .+|.|+|+..
T Consensus 176 ~~~~~v~vGD~~~ 188 (231)
T 3kzx_A 176 PSKEVFFIGDSIS 188 (231)
T ss_dssp CSTTEEEEESSHH
T ss_pred cccCEEEEcCCHH
Confidence 6 8999999984
No 58
>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A
Probab=96.73 E-value=0.003 Score=68.51 Aligned_cols=100 Identities=20% Similarity=0.200 Sum_probs=71.0
Q ss_pred hhhHHHHHHHhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCC--CccEEEeCC-CCCHHHHHHHHcC
Q 000938 1114 VDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD--QVTHVVANS-LGTDKVNWALSTG 1190 (1218)
Q Consensus 1114 ~DVR~IL~eiRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~--kVTHLVAss-~gTeKVk~Alk~G 1190 (1218)
.+++.||..+-...-=..++++||.--.. -+ ..=.+..+.+|-.+..+++. .|+||||.+ ..|.|+-.|+..+
T Consensus 6 ~~a~~il~~~~~~~~~~i~ai~TGc~~~~---~~-~~D~~~Lr~LGI~Iv~d~~~~~~~n~LiAPkilRT~KFL~sLa~~ 81 (256)
T 3t7k_A 6 TKAEKILARFNELPNYDLKAVCTGCFHDG---FN-EVDIEILNQLGIKIFDNIKETDKLNCIFAPKILRTEKFLKSLSFE 81 (256)
T ss_dssp -CHHHHHHTCSCCCCCCEEEEESSSCSSC---CC-HHHHHHHHHTTEEECSSCCGGGCCCEEECSSCCCBHHHHHHTTST
T ss_pred HHHHHHHHhcccCCCeeEEEEecCCcccc---cC-HHHHHHHHHcCeEEEecCcccCCCCEEEcCchhhHHHHHHHhccC
Confidence 45666765332222245566788863111 11 12235678999999999974 899999997 7999999999987
Q ss_pred C--cEEcHHHHHHHHHh---cc------cCCCCCCCCC
Q 000938 1191 R--FVVHPGWVEASALL---YR------RANEQDFAIK 1217 (1218)
Q Consensus 1191 I--kIVSPdWLedCl~~---wk------RVDEsdYlL~ 1217 (1218)
. +||+|+||.+|+.. .+ .++..+|.+.
T Consensus 82 P~~~il~p~FI~~~Lk~ih~~~~~~~~~~l~~~dY~L~ 119 (256)
T 3t7k_A 82 PLKFALKPEFIIDLLKQIHSKKDKLSQININLFDYEIN 119 (256)
T ss_dssp TCCEEECTHHHHHHHHHHC-------CCCCCSSTTBCT
T ss_pred ccceEeCHHHHHHHHHHhhcCCcccccccCChhhccCC
Confidence 5 59999999999998 66 7788899873
No 59
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=96.73 E-value=0.0021 Score=61.99 Aligned_cols=107 Identities=12% Similarity=0.067 Sum_probs=64.7
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhcc-ceEEEEcCCc
Q 000938 905 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHLYTMGN 983 (1218)
Q Consensus 905 LTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk~-YEIVIFTAGt 983 (1218)
+.++||+|+||++... . +.. . + . .+.+.||+.++|++|.+. |.++|.|++.
T Consensus 2 k~v~~D~DGtL~~~~~-----~----~~~-----~---~-------~----~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 2 KLIILDRDGVVNQDSD-----A----FVK-----S---P-------D----EWIALPGSLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp CEEEECSBTTTBCCCT-----T----CCC-----S---G-------G----GCCBCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred CEEEEcCCCccccCCC-----c----cCC-----C---H-------H----HceECcCHHHHHHHHHHCCCEEEEEECCC
Confidence 4689999999997631 0 000 0 0 0 145789999999999865 9999999998
Q ss_pred H---------------HHHHHHHHHHcCCCceeeeeeee----cCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCC
Q 000938 984 K---------------LYATEMAKVLDPKGVLFAGRVIS----RGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 1043 (1218)
Q Consensus 984 r---------------eYAd~VLdiLDP~g~LF~~RIyS----RDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDs 1043 (1218)
. .++..+++.+. .+|...++. .+++. ..+.. +..+.+=++ .+|.+ +.+|+|+|+
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~-~~KP~-~~~~~~~~~-~~~~~~~~~~~vGD~ 127 (179)
T 3l8h_A 54 GLARGLFDTATLNAIHDKMHRALAQMG---GVVDAIFMCPHGPDDGCA-CRKPL-PGMYRDIAR-RYDVDLAGVPAVGDS 127 (179)
T ss_dssp TTTTTSSCHHHHHHHHHHHHHHHHHTT---CCCCEEEEECCCTTSCCS-SSTTS-SHHHHHHHH-HHTCCCTTCEEEESS
T ss_pred ccccCcCCHHHHHHHHHHHHHHHHhCC---CceeEEEEcCCCCCCCCC-CCCCC-HHHHHHHHH-HcCCCHHHEEEECCC
Confidence 6 66777777665 345442222 12211 11110 001112222 35666 889999998
Q ss_pred CC
Q 000938 1044 VR 1045 (1218)
Q Consensus 1044 pd 1045 (1218)
..
T Consensus 128 ~~ 129 (179)
T 3l8h_A 128 LR 129 (179)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 60
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=96.63 E-value=0.003 Score=63.77 Aligned_cols=67 Identities=16% Similarity=0.098 Sum_probs=49.4
Q ss_pred CCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEc
Q 000938 902 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYT 980 (1218)
Q Consensus 902 ~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFT 980 (1218)
.+.+.+++|+|+||+....+. ..+ . .+.+.||+.++|++|.+ .|.++|.|
T Consensus 23 ~~~k~v~~D~DGTL~~~~~~~------~~~-------------------~----~~~~~pg~~e~L~~L~~~G~~~~ivT 73 (211)
T 2gmw_A 23 KSVPAIFLDRDGTINVDHGYV------HEI-------------------D----NFEFIDGVIDAMRELKKMGFALVVVT 73 (211)
T ss_dssp -CBCEEEECSBTTTBCCCSSC------CSG-------------------G----GCCBCTTHHHHHHHHHHTTCEEEEEE
T ss_pred hcCCEEEEcCCCCeECCCCcc------cCc-------------------c----cCcCCcCHHHHHHHHHHCCCeEEEEE
Confidence 345689999999999653110 000 0 13467999999999986 59999999
Q ss_pred CCc---------------HHHHHHHHHHHcCC
Q 000938 981 MGN---------------KLYATEMAKVLDPK 997 (1218)
Q Consensus 981 AGt---------------reYAd~VLdiLDP~ 997 (1218)
++. ..++..+++.+.-.
T Consensus 74 n~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 74 NQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp ECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 999 58888888877643
No 61
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=96.61 E-value=0.00037 Score=63.42 Aligned_cols=84 Identities=14% Similarity=0.151 Sum_probs=54.4
Q ss_pred ecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-Cc
Q 000938 959 LRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SA 1036 (1218)
Q Consensus 959 lRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-sr 1036 (1218)
..|++.++|+++.+. +.++|.|++...++..+++.+.-.. +|.. ++..+++.. .+.. +..+.+=+. .+|.+ +.
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~-i~~~~~~~~-~Kp~-~~~~~~~~~-~~~~~~~~ 93 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNG-VVDK-VLLSGELGV-EKPE-EAAFQAAAD-AIDLPMRD 93 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTT-SSSE-EEEHHHHSC-CTTS-HHHHHHHHH-HTTCCGGG
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHh-hccE-EEEeccCCC-CCCC-HHHHHHHHH-HcCCCccc
Confidence 468999999999875 9999999999999999998875443 5654 554322211 1110 001111122 34655 78
Q ss_pred EEEEeCCCCcc
Q 000938 1037 VVIIDDSVRVW 1047 (1218)
Q Consensus 1037 VVIVDDspdVW 1047 (1218)
+++|+|++.-.
T Consensus 94 ~~~vgD~~~di 104 (137)
T 2pr7_A 94 CVLVDDSILNV 104 (137)
T ss_dssp EEEEESCHHHH
T ss_pred EEEEcCCHHHH
Confidence 99999997543
No 62
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=96.56 E-value=0.0012 Score=64.82 Aligned_cols=84 Identities=24% Similarity=0.158 Sum_probs=60.1
Q ss_pred EEecCCHHHHHHHHh-ccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLS-k~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
++..||+.++|+.+. ..|.+.|.|++.+.++..+++.+.-.. +|.. ++..++.. ..+. ++..|.+=+. .+|..
T Consensus 83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~-~fd~-~~~~~~~~-~~KP-~p~~~~~a~~-~lg~~p 157 (216)
T 3kbb_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YFDV-MVFGDQVK-NGKP-DPEIYLLVLE-RLNVVP 157 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECGGGSS-SCTT-STHHHHHHHH-HHTCCG
T ss_pred cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc-cccc-cccccccC-CCcc-cHHHHHHHHH-hhCCCc
Confidence 578999999999996 569999999999999999999988765 7875 44433322 1121 1112333344 46766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.+|+|+|++.
T Consensus 158 ~e~l~VgDs~~ 168 (216)
T 3kbb_A 158 EKVVVFEDSKS 168 (216)
T ss_dssp GGEEEEECSHH
T ss_pred cceEEEecCHH
Confidence 89999999964
No 63
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=96.55 E-value=0.003 Score=60.35 Aligned_cols=103 Identities=12% Similarity=0.081 Sum_probs=67.9
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhcc-ceEEEEcCC
Q 000938 904 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHLYTMG 982 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk~-YEIVIFTAG 982 (1218)
.+.+++|||+||+++... +.+ .....-.++|+..++|+++.+. +.++|.|++
T Consensus 9 ~k~v~~DlDGTL~~~~~~--~~~-------------------------~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~ 61 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLY--YTE-------------------------HGETIKVFNVLDGIGIKLLQKMGITLAVISGR 61 (162)
T ss_dssp CCEEEECCTTTTSCSEEE--EET-------------------------TEEEEEEEEHHHHHHHHHHHTTTCEEEEEESC
T ss_pred eeEEEEecCcceECCcee--ecC-------------------------CCceeeeecccHHHHHHHHHHCCCEEEEEeCC
Confidence 457899999999976420 000 0122445678999999999865 999999999
Q ss_pred cHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCcc
Q 000938 983 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVW 1047 (1218)
Q Consensus 983 treYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdVW 1047 (1218)
...++..+++.+.-.. +|.. . .. ++ ..++.+-..+|.+ +.+++|+|+..-.
T Consensus 62 ~~~~~~~~l~~~gl~~-~~~~-----~-kp---~~----~~~~~~~~~~~~~~~~~~~vGD~~~Di 113 (162)
T 2p9j_A 62 DSAPLITRLKELGVEE-IYTG-----S-YK---KL----EIYEKIKEKYSLKDEEIGFIGDDVVDI 113 (162)
T ss_dssp CCHHHHHHHHHTTCCE-EEEC-----C------CH----HHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred CcHHHHHHHHHcCCHh-hccC-----C-CC---CH----HHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 9999999999886543 4432 0 00 00 1122222245655 7899999997433
No 64
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=96.53 E-value=0.0016 Score=69.09 Aligned_cols=86 Identities=7% Similarity=0.112 Sum_probs=64.6
Q ss_pred hhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccC----CCccEEEeCCCC------CHHHHHHHHcCCcEE
Q 000938 1125 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID----DQVTHVVANSLG------TDKVNWALSTGRFVV 1194 (1218)
Q Consensus 1125 rqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd----~kVTHLVAss~g------TeKVk~Alk~GIkIV 1194 (1218)
.++|+|+.++|.+-. +....+.++++..||+|..... .+.||+++...+ ..++..+.+.|++||
T Consensus 133 ~~lF~g~~v~l~~~~------~~~~~l~~ii~agGg~vl~~~~~~~~~~~t~~~vd~~~~~~~~~~~~~~~~~~~~i~~v 206 (235)
T 3al2_A 133 EGAFSGWKVILHVDQ------SREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCL 206 (235)
T ss_dssp SSTTTTCEEEEECCH------HHHHHHHHHHHHTTCEECSSCCGGGGGGCSEEEECC--------CCCHHHHHHTTCEEE
T ss_pred CCCCCCcEEEEecCC------CcHHHHHHHHHcCCcEEecCCCCCccccCceEEEecccCCccchhHHHHHHHHcCCcEE
Confidence 579999999887631 1234688899999999976543 246898775321 125667778999999
Q ss_pred cHHHHHHHHHhcccCCCCCCCC
Q 000938 1195 HPGWVEASALLYRRANEQDFAI 1216 (1218)
Q Consensus 1195 SPdWLedCl~~wkRVDEsdYlL 1216 (1218)
+++||.+|+......+-..|.|
T Consensus 207 ~~ewlld~i~~~~~~~~~~y~l 228 (235)
T 3al2_A 207 RTEYIADYLMQESPPHVENYCL 228 (235)
T ss_dssp ETHHHHHHHHCSSCCCHHHHBC
T ss_pred cHHHHHHHHhcCCCCChhheEc
Confidence 9999999999988878777766
No 65
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=96.39 E-value=0.0016 Score=63.57 Aligned_cols=84 Identities=10% Similarity=0.052 Sum_probs=57.9
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|.. +++.++... .+.. + ..++-+...+|.+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 169 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTN-SFDH-LISVDEVRL-FKPH-Q-KVYELAMDTLHLGE 169 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGG-GCSE-EEEGGGTTC-CTTC-H-HHHHHHHHHHTCCG
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChh-hcce-eEehhhccc-CCCC-h-HHHHHHHHHhCCCc
Confidence 56789999999999876 9999999999999999999876543 5654 555433221 1110 0 1122233345766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.+|+|+|+..
T Consensus 170 ~~~~~iGD~~~ 180 (230)
T 3um9_A 170 SEILFVSCNSW 180 (230)
T ss_dssp GGEEEEESCHH
T ss_pred ccEEEEeCCHH
Confidence 88999999963
No 66
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=96.28 E-value=0.0031 Score=70.36 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=48.2
Q ss_pred chHHHHHHHhCCEEeccc-CCCccEEEeCCCC----CHHHHHHHHcCCcEEcHHHHHHHHHh
Q 000938 1149 HPLWQTAEQFGAVCTKHI-DDQVTHVVANSLG----TDKVNWALSTGRFVVHPGWVEASALL 1205 (1218)
Q Consensus 1149 ~~LwkLAeqLGAtVssdV-d~kVTHLVAss~g----TeKVk~Alk~GIkIVSPdWLedCl~~ 1205 (1218)
..+...++++|+++. ++ .+.|||||..+.+ |.|.-+|+-.|++||+++||.+.+..
T Consensus 127 ~~L~~~L~~LGik~v-~~~~detTHlVm~krnT~KvTvK~L~ALI~gkPIV~~~Fl~al~~~ 187 (325)
T 3huf_A 127 SQWASNLNLLGIPTG-LRDSDATTHFVMNRQAGSSITVGTMYAFLKKTVIIDDSYLQYLSTV 187 (325)
T ss_dssp HHHHHHHHTTTCCEE-SSCCTTCCEEECCCCCSSCCCHHHHHHHHTTCEEECHHHHHHHTTC
T ss_pred HHHHHHHHHcCCEEE-EccCCCEEEEEEeccccccchHHHHHHHHCCCcEecHHHHHHHHHh
Confidence 457889999999999 88 6789999997655 45599999999999999999998654
No 67
>4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.005 Score=63.87 Aligned_cols=97 Identities=23% Similarity=0.322 Sum_probs=71.2
Q ss_pred HHHHHhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEE-ecccCCCccEEEeCCCC----CHHHHHHHHcCCcE
Q 000938 1119 ILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVC-TKHIDDQVTHVVANSLG----TDKVNWALSTGRFV 1193 (1218)
Q Consensus 1119 IL~eiRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtV-ssdVd~kVTHLVAss~g----TeKVk~Alk~GIkI 1193 (1218)
||+..+-.-++|+++|+.-+-|..+ ...-.+-+.....||.- +..+.-++||+||.... .+..-.|+-.+|+|
T Consensus 153 ilrthkmtdmsgitvclgpldplke--isdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnnipi 230 (290)
T 4gns_A 153 ILRTHKMTDMSGITVCLGPLDPLKE--ISDLQISQCLSHIGARPLQRHVAIDTTHFVCNDLDNEESNEELIRAKHNNIPI 230 (290)
T ss_dssp EEECCCTTCCTTCCEEECCCCGGGT--CCHHHHHHHHHHTTCCCCBSSCCTTCCEEECSCCTTCTTCHHHHHHHHTTCCE
T ss_pred eeeecccccccCceEEecCCChhhh--hhhccHHHHHHHhCCchhhheeeeecceeeecCCCcccchHHHHhhhccCCCc
Confidence 7777777789999999965544421 01113445556668875 55566789999999743 45666788899999
Q ss_pred EcHHHHHHHHHhcccCCCCCCCCC
Q 000938 1194 VHPGWVEASALLYRRANEQDFAIK 1217 (1218)
Q Consensus 1194 VSPdWLedCl~~wkRVDEsdYlL~ 1217 (1218)
|.|+|+.+|.-..+-+.-..|.++
T Consensus 231 vrpewvracevekrivgvrgfyld 254 (290)
T 4gns_A 231 VRPEWVRACEVEKRIVGVRGFYLD 254 (290)
T ss_dssp ECTHHHHHHHHTTSCCCSGGGBTT
T ss_pred cCHHHHHHHhhhheeeeeeeEEEc
Confidence 999999999998888887777664
No 68
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=96.07 E-value=0.0049 Score=60.97 Aligned_cols=49 Identities=24% Similarity=0.395 Sum_probs=41.5
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCC-ceeeeee
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKG-VLFAGRV 1005 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g-~LF~~RI 1005 (1218)
+.++||+.++|+.+.+. +.++|.|++...++..+++.+.-.. .+|...+
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~ 135 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRL 135 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECE
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeE
Confidence 56899999999999865 9999999999999999999887653 4776543
No 69
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=95.93 E-value=0.0056 Score=60.39 Aligned_cols=84 Identities=11% Similarity=0.058 Sum_probs=52.9
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceee-eeeeecCCCCCCCCCCCCCCcccccccccCCC
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~-~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD 1034 (1218)
....|++.++|+.+.+. +.++|+|++...++..+++. .-.. +|. +.+++.++.. ...+. + ..++-+-..+|.+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~~~~~~~~~~~-~~kp~-~-~~~~~~~~~lg~~ 181 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPG-IFQANLMVTAFDVK-YGKPN-P-EPYLMALKKGGFK 181 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTT-TCCGGGEECGGGCS-SCTTS-S-HHHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHH-hcCCCeEEecccCC-CCCCC-C-HHHHHHHHHcCCC
Confidence 56789999999999875 99999999999999998886 4333 662 2355443321 11110 0 1122232345766
Q ss_pred -CcEEEEeCCCC
Q 000938 1035 -SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 -srVVIVDDspd 1045 (1218)
+.+|.|+|+..
T Consensus 182 ~~~~i~vGD~~~ 193 (247)
T 3dv9_A 182 PNEALVIENAPL 193 (247)
T ss_dssp GGGEEEEECSHH
T ss_pred hhheEEEeCCHH
Confidence 88999999974
No 70
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=95.91 E-value=0.004 Score=67.90 Aligned_cols=88 Identities=16% Similarity=0.258 Sum_probs=57.2
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCC------CCCCCCCCCCCCccccccc
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD------DGDPFDGDERVPKSKDLEG 1029 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDd------c~~~~dG~Er~~yiKDLsr 1029 (1218)
+.++||+.++|+.+.+. |.++|.|++...++..+++.+.-.. +|...+...+. ++....+......++.+..
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~-~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY-AFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe-EEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 56999999999999865 9999999999999999999987654 67654432221 0000000000001122222
Q ss_pred ccCCC-CcEEEEeCCCC
Q 000938 1030 VLGME-SAVVIIDDSVR 1045 (1218)
Q Consensus 1030 VLGRD-srVVIVDDspd 1045 (1218)
.+|.+ +.+|.|.|+..
T Consensus 257 ~lgv~~~~~i~VGDs~~ 273 (317)
T 4eze_A 257 RLNIATENIIACGDGAN 273 (317)
T ss_dssp HHTCCGGGEEEEECSGG
T ss_pred HcCCCcceEEEEeCCHH
Confidence 34655 78999999974
No 71
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=95.73 E-value=0.0028 Score=65.15 Aligned_cols=84 Identities=20% Similarity=0.166 Sum_probs=57.0
Q ss_pred EEecCCHHHHHHHHhc-cc--eEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCC-CCCCCCCCc---cccccc
Q 000938 957 TKLRPGIWTFLERASK-LF--EMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDP-FDGDERVPK---SKDLEG 1029 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk-~Y--EIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~-~dG~Er~~y---iKDLsr 1029 (1218)
+...|++.++|+.+.+ .| .++|+|++...++..+++.+.-.. +|.. +++.+..... ..+ ++. ++-+..
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~fd~-v~~~~~~~~~~~~~---Kp~~~~~~~~~~ 215 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIAD-LFDG-LTYCDYSRTDTLVC---KPHVKAFEKAMK 215 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTT-SCSE-EECCCCSSCSSCCC---TTSHHHHHHHHH
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccc-ccce-EEEeccCCCcccCC---CcCHHHHHHHHH
Confidence 5678999999999986 58 999999999999999999887665 6765 4433222110 111 111 112222
Q ss_pred ccCCC--CcEEEEeCCCC
Q 000938 1030 VLGME--SAVVIIDDSVR 1045 (1218)
Q Consensus 1030 VLGRD--srVVIVDDspd 1045 (1218)
.+|.+ +.+|+|+|+..
T Consensus 216 ~lgi~~~~~~i~vGD~~~ 233 (282)
T 3nuq_A 216 ESGLARYENAYFIDDSGK 233 (282)
T ss_dssp HHTCCCGGGEEEEESCHH
T ss_pred HcCCCCcccEEEEcCCHH
Confidence 35654 78999999973
No 72
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=95.63 E-value=0.027 Score=63.60 Aligned_cols=111 Identities=15% Similarity=0.111 Sum_probs=68.9
Q ss_pred CCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEc
Q 000938 902 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYT 980 (1218)
Q Consensus 902 ~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFT 980 (1218)
.+...++||||+||+.+.... . +. ....-|..+-||+.++|+.|.+ .|.|+|.|
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~---~-----~~-----------------~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvT 110 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGK---V-----FP-----------------TSPSDWRILYPEIPKKLQELAAEGYKLVIFT 110 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCS---S-----SC-----------------SSTTCCEESCTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEeCCCCccccCCCc---c-----CC-----------------CCHHHhhhhcccHHHHHHHHHHCCCeEEEEe
Confidence 456789999999999774210 0 00 0001134578999999999986 49999999
Q ss_pred CCc------------HHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccC----CC-CcEEEEeCC
Q 000938 981 MGN------------KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG----ME-SAVVIIDDS 1043 (1218)
Q Consensus 981 AGt------------reYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLG----RD-srVVIVDDs 1043 (1218)
+.. ..++..+++.+.- .|.. +++.+++. +.+.+ +..+.+=+. .+| .+ +.+|+|.|+
T Consensus 111 N~~gi~~g~~~~~~~~~~~~~~l~~lgl---~fd~-i~~~~~~~-~~KP~-p~~~~~a~~-~l~~~~~v~~~~~l~VGDs 183 (416)
T 3zvl_A 111 NQMGIGRGKLPAEVFKGKVEAVLEKLGV---PFQV-LVATHAGL-NRKPV-SGMWDHLQE-QANEGIPISVEDSVFVGDA 183 (416)
T ss_dssp ECHHHHTTSSCHHHHHHHHHHHHHHHTS---CCEE-EEECSSST-TSTTS-SHHHHHHHH-HSSTTCCCCGGGCEEECSC
T ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCC---CEEE-EEECCCCC-CCCCC-HHHHHHHHH-HhCCCCCCCHHHeEEEECC
Confidence 966 3347777777754 3653 66655432 22211 111222233 344 45 789999999
Q ss_pred C
Q 000938 1044 V 1044 (1218)
Q Consensus 1044 p 1044 (1218)
.
T Consensus 184 ~ 184 (416)
T 3zvl_A 184 A 184 (416)
T ss_dssp S
T ss_pred C
Confidence 6
No 73
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=95.32 E-value=0.07 Score=54.04 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=38.4
Q ss_pred EecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceee
Q 000938 958 KLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFA 1002 (1218)
Q Consensus 958 KlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~ 1002 (1218)
.++||+.++|+.+.+ .+.++|.|.+.+.++..+++.+.-.. +|.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~ 188 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-YFA 188 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EEC
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh-HhH
Confidence 789999999999986 49999999999999999999987643 443
No 74
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=95.19 E-value=0.019 Score=57.64 Aligned_cols=85 Identities=12% Similarity=0.001 Sum_probs=56.9
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.+.+|. .+++.++... .... . ..++-+...+|.+
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~ 185 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA-STVFATDVVR-GRPF-P-DMALKVALELEVGH 185 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS-EEECGGGSSS-CTTS-S-HHHHHHHHHHTCSC
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc-eEecHHhcCC-CCCC-H-HHHHHHHHHcCCCC
Confidence 57889999999999865 99999999999999999998765542254 3555443211 1110 0 1122333345654
Q ss_pred -CcEEEEeCCCC
Q 000938 1035 -SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 -srVVIVDDspd 1045 (1218)
+.+|.|+|+..
T Consensus 186 ~~~~i~vGD~~~ 197 (277)
T 3iru_A 186 VNGCIKVDDTLP 197 (277)
T ss_dssp GGGEEEEESSHH
T ss_pred CccEEEEcCCHH
Confidence 68999999963
No 75
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=95.13 E-value=0.023 Score=57.23 Aligned_cols=64 Identities=17% Similarity=0.130 Sum_probs=47.5
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcC
Q 000938 903 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 981 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTA 981 (1218)
....+++|+|+||+....+. ..+ ....+.||+.++|++|.+ .|.++|.|+
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~------~~~-----------------------~~~~~~~g~~e~L~~L~~~G~~~~i~Tn 80 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYP------SDP-----------------------AEIVLRPQMLPAIATANRAGIPVVVVTN 80 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCT------TCG-----------------------GGCCBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred cCCEEEEeCCCCcCCCCccc------CCc-----------------------ccCeECcCHHHHHHHHHHCCCEEEEEcC
Confidence 45678999999999763210 000 013467999999999985 599999999
Q ss_pred CcH---------------HHHHHHHHHHc
Q 000938 982 GNK---------------LYATEMAKVLD 995 (1218)
Q Consensus 982 Gtr---------------eYAd~VLdiLD 995 (1218)
+.. .++..+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 109 (218)
T 2o2x_A 81 QSGIARGYFGWSAFAAVNGRVLELLREEG 109 (218)
T ss_dssp CHHHHTTSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCcccccHHHHHHHHHHHHHHHHHcC
Confidence 998 68888887764
No 76
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=94.82 E-value=0.021 Score=65.13 Aligned_cols=119 Identities=16% Similarity=0.181 Sum_probs=72.7
Q ss_pred hhhhcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEE-EEecCCHHHHHHHHhcc-c
Q 000938 897 KKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMW-TKLRPGIWTFLERASKL-F 974 (1218)
Q Consensus 897 ~rLLs~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~Y-VKlRPGLdEFLeeLSk~-Y 974 (1218)
..+...+.++||+|||+||..-... ..++ + .+.+. .++- -..-||+.++|+.+.+. +
T Consensus 215 ~~l~~~~iK~lv~DvDnTL~~G~l~-----~dG~------~---------~~~~~-dg~g~g~~ypgv~e~L~~Lk~~Gi 273 (387)
T 3nvb_A 215 AAIQGKFKKCLILDLDNTIWGGVVG-----DDGW------E---------NIQVG-HGLGIGKAFTEFQEWVKKLKNRGI 273 (387)
T ss_dssp HHHTTCCCCEEEECCBTTTBBSCHH-----HHCG------G---------GSBCS-SSSSTHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCCcEEEEcCCCCCCCCeec-----CCCc------e---------eEEec-cCccccccCHHHHHHHHHHHHCCC
Confidence 4567789999999999999865420 0000 0 01111 0110 12458999999999865 9
Q ss_pred eEEEEcCCcHHHHHHHHHH-----HcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCcc
Q 000938 975 EMHLYTMGNKLYATEMAKV-----LDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVW 1047 (1218)
Q Consensus 975 EIVIFTAGtreYAd~VLdi-----LDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdVW 1047 (1218)
.+.|.|+..+.++..+++. |...+ +|. ++.. . +. .+ ..++.+-..+|.. +.+++|+|++.-.
T Consensus 274 ~laI~Snn~~~~v~~~l~~~~~~~l~l~~-~~~--v~~~--~----KP-Kp-~~l~~al~~Lgl~pee~v~VGDs~~Di 341 (387)
T 3nvb_A 274 IIAVCSKNNEGKAKEPFERNPEMVLKLDD-IAV--FVAN--W----EN-KA-DNIRTIQRTLNIGFDSMVFLDDNPFER 341 (387)
T ss_dssp EEEEEEESCHHHHHHHHHHCTTCSSCGGG-CSE--EEEE--S----SC-HH-HHHHHHHHHHTCCGGGEEEECSCHHHH
T ss_pred EEEEEcCCCHHHHHHHHhhccccccCccC-ccE--EEeC--C----CC-cH-HHHHHHHHHhCcCcccEEEECCCHHHH
Confidence 9999999999999999986 33333 333 2211 0 00 00 1122222245766 8899999997544
No 77
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=94.26 E-value=0.012 Score=57.93 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=34.5
Q ss_pred EEecCCHHHHHHHHhc--cceEEEEcCCcHHHHHHHHHHHc
Q 000938 957 TKLRPGIWTFLERASK--LFEMHLYTMGNKLYATEMAKVLD 995 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk--~YEIVIFTAGtreYAd~VLdiLD 995 (1218)
+.+.||+.++|+.+.+ .|.++|.|++.+.++..+++.+.
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~g 112 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYR 112 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhC
Confidence 5688999999999987 49999999999999988888764
No 78
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=94.25 E-value=0.024 Score=57.19 Aligned_cols=79 Identities=15% Similarity=0.060 Sum_probs=49.4
Q ss_pred EEecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCC-C
Q 000938 957 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM-E 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGR-D 1034 (1218)
+.+.||+.++|+.|.+ .|.+.|.|+..+..+..++ . .+|. .+++.++.. ..+. .+..+.+=+. .+|. .
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~---~~~d-~v~~~~~~~-~~KP-~p~~~~~a~~-~l~~~~ 104 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A---PVND-WMIAAPRPT-AGWP-QPDACWMALM-ALNVSQ 104 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T---TTTT-TCEECCCCS-SCTT-STHHHHHHHH-HTTCSC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C---ccCC-EEEECCcCC-CCCC-ChHHHHHHHH-HcCCCC
Confidence 4567999999999975 5999999999988874443 3 2444 355544321 1111 1112233333 3565 3
Q ss_pred -CcEEEEeCCCC
Q 000938 1035 -SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 -srVVIVDDspd 1045 (1218)
+.+|+|.|++.
T Consensus 105 ~~~~v~VGDs~~ 116 (196)
T 2oda_A 105 LEGCVLISGDPR 116 (196)
T ss_dssp STTCEEEESCHH
T ss_pred CccEEEEeCCHH
Confidence 67999999974
No 79
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=94.16 E-value=0.075 Score=52.26 Aligned_cols=103 Identities=13% Similarity=0.032 Sum_probs=67.9
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcCC
Q 000938 904 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 982 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTAG 982 (1218)
-+.+++|||+||+.+... +.+ .....-.+.|...++|+++.+ .+.++|.|..
T Consensus 8 ik~i~~DlDGTL~~~~~~--~~~-------------------------~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~ 60 (180)
T 1k1e_A 8 IKFVITDVDGVLTDGQLH--YDA-------------------------NGEAIKSFHVRDGLGIKMLMDADIQVAVLSGR 60 (180)
T ss_dssp CCEEEEECTTTTSCSEEE--EET-------------------------TEEEEEEEEHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEeCCCCcCCCCee--ecc-------------------------CcceeeeeccchHHHHHHHHHCCCeEEEEeCC
Confidence 357899999999976420 000 012334567788899999975 5999999999
Q ss_pred cHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCcc
Q 000938 983 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVW 1047 (1218)
Q Consensus 983 treYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdVW 1047 (1218)
...++..+++.+.-.. +|.. +.. ++ ..++.+...+|.+ +.++.|.|+..-.
T Consensus 61 ~~~~~~~~~~~lgl~~-~~~~-------~k~--k~----~~~~~~~~~~~~~~~~~~~vGD~~~Di 112 (180)
T 1k1e_A 61 DSPILRRRIADLGIKL-FFLG-------KLE--KE----TACFDLMKQAGVTAEQTAYIGDDSVDL 112 (180)
T ss_dssp CCHHHHHHHHHHTCCE-EEES-------CSC--HH----HHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CcHHHHHHHHHcCCce-eecC-------CCC--cH----HHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 9999999999987553 3421 100 00 1223333345665 7899999997433
No 80
>2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae}
Probab=94.10 E-value=0.027 Score=53.87 Aligned_cols=85 Identities=9% Similarity=0.101 Sum_probs=63.5
Q ss_pred hhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEecccCCCc--cEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHHH
Q 000938 1126 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQV--THVVANSLGTDKVNWALSTGRFVVHPGWVEASA 1203 (1218)
Q Consensus 1126 qILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVssdVd~kV--THLVAss~gTeKVk~Alk~GIkIVSPdWLedCl 1203 (1218)
.+|+|..+++..--...+...+..+|.+++...||+|...+.++. -+.|++..++. +++.|+|.+|.+|+
T Consensus 10 ~vF~g~~Fyin~d~~a~ds~~d~d~L~~lI~~nGG~Vl~~lP~~s~~~~yVVSpyN~t--------~LpTVtpTYI~aC~ 81 (106)
T 2l42_A 10 PPLSNMKFYLNRDADAHDSLNDIDQLARLIRANGGEVLDSKPRESKENVFIVSPYNHT--------NLPTVTPTYIKACC 81 (106)
T ss_dssp CSSCCCCBEECCSSSCSSCSSTHHHHHHHHHTTTSCCCEECCCCCSSCCCCBCTTCCC--------SSSBCCTTHHHHHH
T ss_pred ccccCcEEEEcCCCccchhhhHHHHHHHHHHhcCcEEhhhCcccccCCeEEEeCCCCC--------CCccccHHHHHHHH
Confidence 469999988764211110011235799999999999999987655 36666665544 78999999999999
Q ss_pred HhcccCCCCCCCCCC
Q 000938 1204 LLYRRANEQDFAIKP 1218 (1218)
Q Consensus 1204 ~~wkRVDEsdYlL~p 1218 (1218)
.....++-.+|++.+
T Consensus 82 ~~nTLLnv~~YLvp~ 96 (106)
T 2l42_A 82 QSNSLLNMENYLVPY 96 (106)
T ss_dssp HSTTSCGGGGCCBCS
T ss_pred hcCceecccccccCc
Confidence 999999999999854
No 81
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=94.06 E-value=0.024 Score=63.07 Aligned_cols=90 Identities=17% Similarity=0.179 Sum_probs=57.5
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCC------CCCCCCCCCCCCccccccc
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD------DGDPFDGDERVPKSKDLEG 1029 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDd------c~~~~dG~Er~~yiKDLsr 1029 (1218)
+.++||+.++|+.+.+. |.++|.|++...++..+++.+.-.. +|.+.+...+. .+....+......++.+..
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDY-VAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccc-eeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 57999999999999875 9999999999999999999987653 56543311110 0000000000001122222
Q ss_pred ccCCC-CcEEEEeCCCCcc
Q 000938 1030 VLGME-SAVVIIDDSVRVW 1047 (1218)
Q Consensus 1030 VLGRD-srVVIVDDspdVW 1047 (1218)
.+|.+ +.+|.|+|+..-.
T Consensus 334 ~~gi~~~~~i~vGD~~~Di 352 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGANDI 352 (415)
T ss_dssp HHTCCGGGEEEEECSGGGH
T ss_pred HcCcChhhEEEEECCHHHH
Confidence 34666 7899999997433
No 82
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=93.97 E-value=0.067 Score=51.09 Aligned_cols=103 Identities=17% Similarity=0.118 Sum_probs=62.7
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcCC
Q 000938 904 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 982 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTAG 982 (1218)
-..+++|+|+||+.+... +.+. ...+ .-+..+.++ +|+.+.+ .+.++|.|+.
T Consensus 4 ik~vifD~DGTL~~~~~~--~~~~-----------------~~~~------~~~~~~~~~--~l~~l~~~g~~~~i~T~~ 56 (164)
T 3e8m_A 4 IKLILTDIDGVWTDGGMF--YDQT-----------------GNEW------KKFNTSDSA--GIFWAHNKGIPVGILTGE 56 (164)
T ss_dssp CCEEEECSTTTTSSSEEE--ECSS-----------------SCEE------EEEEGGGHH--HHHHHHHTTCCEEEECSS
T ss_pred ceEEEEcCCCceEcCcEE--EcCC-----------------CcEE------EEecCChHH--HHHHHHHCCCEEEEEeCC
Confidence 457999999999986421 0000 0000 012234443 7888875 4999999999
Q ss_pred cHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCcc
Q 000938 983 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVW 1047 (1218)
Q Consensus 983 treYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdVW 1047 (1218)
...++..+++.+.-.. +|... .. ++ ..++.+...+|.+ +.+++|.|+..-.
T Consensus 57 ~~~~~~~~~~~~gl~~-~~~~~---kp------k~----~~~~~~~~~~~~~~~~~~~vGD~~~Di 108 (164)
T 3e8m_A 57 KTEIVRRRAEKLKVDY-LFQGV---VD------KL----SAAEELCNELGINLEQVAYIGDDLNDA 108 (164)
T ss_dssp CCHHHHHHHHHTTCSE-EECSC---SC------HH----HHHHHHHHHHTCCGGGEEEECCSGGGH
T ss_pred ChHHHHHHHHHcCCCE-eeccc---CC------hH----HHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 9999999999886543 33221 00 00 1223333345665 7899999998433
No 83
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=93.22 E-value=0.15 Score=50.60 Aligned_cols=69 Identities=17% Similarity=0.173 Sum_probs=45.7
Q ss_pred HHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeC
Q 000938 965 TFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDD 1042 (1218)
Q Consensus 965 EFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDD 1042 (1218)
.+|+.+.+. +.++|.|+....++..+++.+.-.. +|.. . .. ++ ..++.+...+|.+ +.+++|+|
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-~~~~-----~-kp---k~----~~~~~~~~~~g~~~~~~~~iGD 125 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-LYQG-----Q-SN---KL----IAFSDLLEKLAIAPENVAYVGD 125 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-EECS-----C-SC---SH----HHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-eecC-----C-CC---CH----HHHHHHHHHcCCCHHHEEEECC
Confidence 388888764 9999999999999999999886442 3321 0 00 00 1223333345665 78999999
Q ss_pred CCCcc
Q 000938 1043 SVRVW 1047 (1218)
Q Consensus 1043 spdVW 1047 (1218)
+..-.
T Consensus 126 ~~~Di 130 (188)
T 2r8e_A 126 DLIDW 130 (188)
T ss_dssp SGGGH
T ss_pred CHHHH
Confidence 97433
No 84
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=93.04 E-value=0.0034 Score=60.62 Aligned_cols=86 Identities=15% Similarity=0.152 Sum_probs=52.5
Q ss_pred EEEecCCHHHHHHHHh-ccceEEEEcCCcHHHHHHHHHH-HcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCC
Q 000938 956 WTKLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKV-LDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 1033 (1218)
Q Consensus 956 YVKlRPGLdEFLeeLS-k~YEIVIFTAGtreYAd~VLdi-LDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGR 1033 (1218)
++...|++.++|+.+. ..+.++|.|++...++..++.. +.-. .+|.. +++.++... .++. + ..++-+-..+|.
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~-~~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~~~ 163 (206)
T 2b0c_A 89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAADH-IYLSQDLGM-RKPE-A-RIYQHVLQAEGF 163 (206)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHCSE-EEEHHHHTC-CTTC-H-HHHHHHHHHHTC
T ss_pred hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh-hheee-EEEecccCC-CCCC-H-HHHHHHHHHcCC
Confidence 4788999999999998 5699999999998886665543 2211 23443 444322211 1110 0 012222224576
Q ss_pred C-CcEEEEeCCCCc
Q 000938 1034 E-SAVVIIDDSVRV 1046 (1218)
Q Consensus 1034 D-srVVIVDDspdV 1046 (1218)
+ +.+|+|+|++.-
T Consensus 164 ~~~~~~~vgD~~~D 177 (206)
T 2b0c_A 164 SPSDTVFFDDNADN 177 (206)
T ss_dssp CGGGEEEEESCHHH
T ss_pred CHHHeEEeCCCHHH
Confidence 6 889999999753
No 85
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=92.79 E-value=0.097 Score=55.83 Aligned_cols=84 Identities=15% Similarity=0.135 Sum_probs=49.0
Q ss_pred hcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeee-eccceEEEEecCCHHHHHHHHhc-cceEE
Q 000938 900 FSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFR-FPHMGMWTKLRPGIWTFLERASK-LFEMH 977 (1218)
Q Consensus 900 Ls~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~-~~~~~~YVKlRPGLdEFLeeLSk-~YEIV 977 (1218)
...++..+|+||||||+.+.. ....-.. . ..++...|. +. ..--..+.||+.+||+.|.+ .+.|+
T Consensus 55 ~~~~~kavifDlDGTLld~~~------~~~~~~~---~---~~~~~~~~~~~~-~~~~~~~~pg~~e~L~~L~~~Gi~i~ 121 (258)
T 2i33_A 55 GTEKKPAIVLDLDETVLDNSP------HQAMSVK---T---GKGYPYKWDDWI-NKAEAEALPGSIDFLKYTESKGVDIY 121 (258)
T ss_dssp CCSSEEEEEECSBTTTEECHH------HHHHHHH---H---SCCTTTTHHHHH-HHCCCEECTTHHHHHHHHHHTTCEEE
T ss_pred cCCCCCEEEEeCcccCcCCHH------HHHHHHh---c---ccchHHHHHHHH-HcCCCCcCccHHHHHHHHHHCCCEEE
Confidence 356788999999999998741 1100000 0 000000000 00 00014577999999999975 59999
Q ss_pred EEcCCc---HHHHHHHHHHHcC
Q 000938 978 LYTMGN---KLYATEMAKVLDP 996 (1218)
Q Consensus 978 IFTAGt---reYAd~VLdiLDP 996 (1218)
|.|+.. +..+...++.+.-
T Consensus 122 iaTnr~~~~~~~~~~~L~~~Gl 143 (258)
T 2i33_A 122 YISNRKTNQLDATIKNLERVGA 143 (258)
T ss_dssp EEEEEEGGGHHHHHHHHHHHTC
T ss_pred EEcCCchhHHHHHHHHHHHcCC
Confidence 999988 4455555555543
No 86
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=92.06 E-value=0.051 Score=54.55 Aligned_cols=68 Identities=13% Similarity=0.139 Sum_probs=44.5
Q ss_pred HHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCC
Q 000938 966 FLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 1043 (1218)
Q Consensus 966 FLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDs 1043 (1218)
-|+.|.+ .|.++|.|+....++..+++.+.-.. +|.. + .. ++ ..++.+...+|.+ +.++.|.|+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-~~~~-~--kp------k~----~~~~~~~~~~~~~~~~~~~vGD~ 119 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-YYKG-Q--VD------KR----SAYQHLKKTLGLNDDEFAYIGDD 119 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-EECS-C--SS------CH----HHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-ceeC-C--CC------hH----HHHHHHHHHhCCCHHHEEEECCC
Confidence 3777775 59999999999999999999886543 3322 1 00 00 1223333345666 789999999
Q ss_pred CCcc
Q 000938 1044 VRVW 1047 (1218)
Q Consensus 1044 pdVW 1047 (1218)
..-.
T Consensus 120 ~~Di 123 (191)
T 3n1u_A 120 LPDL 123 (191)
T ss_dssp GGGH
T ss_pred HHHH
Confidence 7433
No 87
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=92.04 E-value=0.15 Score=50.85 Aligned_cols=103 Identities=16% Similarity=0.066 Sum_probs=64.3
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcC
Q 000938 903 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 981 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTA 981 (1218)
+-..+++||||||+.+... +.. . ...+ ..+.+++++ +|+.+.+ .+.++|.|+
T Consensus 18 ~ik~vifD~DGTL~d~~~~--~~~------------~-----~~~~------~~~~~~~~~--~l~~L~~~g~~~~i~T~ 70 (189)
T 3mn1_A 18 AIKLAVFDVDGVLTDGRLY--FME------------D-----GSEI------KTFNTLDGQ--GIKMLIASGVTTAIISG 70 (189)
T ss_dssp TCCEEEECSTTTTSCSEEE--EET------------T-----SCEE------EEEEHHHHH--HHHHHHHTTCEEEEECS
T ss_pred hCCEEEEcCCCCcCCccEe--ecc------------C-----CcEe------eeeccccHH--HHHHHHHCCCEEEEEEC
Confidence 3458999999999977421 000 0 0000 123344444 8888875 599999999
Q ss_pred CcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCc
Q 000938 982 GNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRV 1046 (1218)
Q Consensus 982 GtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdV 1046 (1218)
..+.++..+++.+.-.. +|.. + .+ ++ ..++.+...+|.+ +.++.|.|+..-
T Consensus 71 ~~~~~~~~~~~~lgl~~-~f~~-~--~~------K~----~~~~~~~~~~g~~~~~~~~vGD~~nD 122 (189)
T 3mn1_A 71 RKTAIVERRAKSLGIEH-LFQG-R--ED------KL----VVLDKLLAELQLGYEQVAYLGDDLPD 122 (189)
T ss_dssp SCCHHHHHHHHHHTCSE-EECS-C--SC------HH----HHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred cChHHHHHHHHHcCCHH-HhcC-c--CC------hH----HHHHHHHHHcCCChhHEEEECCCHHH
Confidence 99999999999987543 3432 1 00 00 1233333345666 789999999743
No 88
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=91.84 E-value=0.16 Score=55.18 Aligned_cols=75 Identities=17% Similarity=0.219 Sum_probs=47.1
Q ss_pred cCCCeEEEEeCCCceeecccC--------CCCCCc-hhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHh
Q 000938 901 SARKLCLVLDLDHTLLNSAKF--------HEVDPV-HDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS 971 (1218)
Q Consensus 901 s~kKLTLVLDLDETLIHSs~~--------~evdP~-~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLS 971 (1218)
..+|..+|||+||||+..... ..+++. ..+|.. . -....-||+.+||+.|.
T Consensus 55 ~g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~-------------------~-g~~~~~pg~~ell~~L~ 114 (260)
T 3pct_A 55 KGKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVD-------------------A-RQSAAIPGAVEFSNYVN 114 (260)
T ss_dssp ---CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHH-------------------T-TCCEECTTHHHHHHHHH
T ss_pred CCCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHH-------------------c-CCCCCCccHHHHHHHHH
Confidence 346679999999999987521 011110 011110 0 13578899999999997
Q ss_pred c-cceEEEEcCCcHH----HHHHHHHHHc
Q 000938 972 K-LFEMHLYTMGNKL----YATEMAKVLD 995 (1218)
Q Consensus 972 k-~YEIVIFTAGtre----YAd~VLdiLD 995 (1218)
+ .+.|+|.|+-... .+..-++.+.
T Consensus 115 ~~G~~i~ivTgR~~~~~r~~T~~~L~~lG 143 (260)
T 3pct_A 115 ANGGTMFFVSNRRDDVEKAGTVDDMKRLG 143 (260)
T ss_dssp HTTCEEEEEEEEETTTSHHHHHHHHHHHT
T ss_pred HCCCeEEEEeCCCccccHHHHHHHHHHcC
Confidence 5 5999999988654 5555555554
No 89
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=91.71 E-value=0.1 Score=53.90 Aligned_cols=103 Identities=16% Similarity=0.186 Sum_probs=64.1
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcCC
Q 000938 904 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 982 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTAG 982 (1218)
-..+++|||+||+.+... +.. . ...+ ..+.+++++ +|+.|.+ .+.+.|.|+.
T Consensus 49 ik~viFDlDGTL~Ds~~~----------~~~----~-----~~~~------~~~~~~d~~--~L~~L~~~G~~l~I~T~~ 101 (211)
T 3ij5_A 49 IRLLICDVDGVMSDGLIY----------MGN----Q-----GEEL------KAFNVRDGY--GIRCLITSDIDVAIITGR 101 (211)
T ss_dssp CSEEEECCTTTTSSSEEE----------EET----T-----SCEE------EEEEHHHHH--HHHHHHHTTCEEEEECSS
T ss_pred CCEEEEeCCCCEECCHHH----------Hhh----h-----hHHH------HHhccchHH--HHHHHHHCCCEEEEEeCC
Confidence 358999999999987521 000 0 0000 112344444 8888875 5999999999
Q ss_pred cHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCcc
Q 000938 983 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVW 1047 (1218)
Q Consensus 983 treYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdVW 1047 (1218)
....+..+++.+.-.. +|... .+ ++ ..++.+...+|.+ +.++.|-|+..-.
T Consensus 102 ~~~~~~~~l~~lgi~~-~f~~~---k~------K~----~~l~~~~~~lg~~~~~~~~vGDs~nDi 153 (211)
T 3ij5_A 102 RAKLLEDRANTLGITH-LYQGQ---SD------KL----VAYHELLATLQCQPEQVAYIGDDLIDW 153 (211)
T ss_dssp CCHHHHHHHHHHTCCE-EECSC---SS------HH----HHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CHHHHHHHHHHcCCch-hhccc---CC------hH----HHHHHHHHHcCcCcceEEEEcCCHHHH
Confidence 9999999999987543 33321 00 00 1233333345666 7899999987544
No 90
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=91.67 E-value=0.18 Score=49.66 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=44.9
Q ss_pred HHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCC
Q 000938 966 FLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 1043 (1218)
Q Consensus 966 FLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDs 1043 (1218)
+|+.+.+ .+.++|.|+....++..+++.+.-. +|... .. ++ ..++.+...+|.+ +.++.|.|+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--~~~~~---~~------k~----~~l~~~~~~~~~~~~~~~~vGD~ 111 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--VLHGI---DR------KD----LALKQWCEEQGIAPERVLYVGND 111 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--EEESC---SC------HH----HHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--eEeCC---CC------hH----HHHHHHHHHcCCCHHHEEEEcCC
Confidence 7888875 5999999999999999999998765 44321 00 00 1223333345665 789999998
Q ss_pred CC
Q 000938 1044 VR 1045 (1218)
Q Consensus 1044 pd 1045 (1218)
..
T Consensus 112 ~n 113 (176)
T 3mmz_A 112 VN 113 (176)
T ss_dssp GG
T ss_pred HH
Confidence 64
No 91
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=91.57 E-value=0.16 Score=55.09 Aligned_cols=75 Identities=17% Similarity=0.194 Sum_probs=48.7
Q ss_pred cCCCeEEEEeCCCceeecccC--------CCCCCc-hhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHh
Q 000938 901 SARKLCLVLDLDHTLLNSAKF--------HEVDPV-HDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS 971 (1218)
Q Consensus 901 s~kKLTLVLDLDETLIHSs~~--------~evdP~-~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLS 971 (1218)
..+|..+|||+||||+..... ..+++. ..+|+. .-....-||+.+||+.+.
T Consensus 55 ~~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~--------------------~~~~~~~pG~~ell~~L~ 114 (262)
T 3ocu_A 55 KGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVD--------------------ARQSRAVPGAVEFNNYVN 114 (262)
T ss_dssp TTCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHH--------------------HTCCEECTTHHHHHHHHH
T ss_pred CCCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHH--------------------cCCCCCCccHHHHHHHHH
Confidence 467889999999999987520 011110 011111 013678899999999997
Q ss_pred c-cceEEEEcCCcHH----HHHHHHHHHc
Q 000938 972 K-LFEMHLYTMGNKL----YATEMAKVLD 995 (1218)
Q Consensus 972 k-~YEIVIFTAGtre----YAd~VLdiLD 995 (1218)
+ .+.|+|.|+.... .+..-++.+.
T Consensus 115 ~~G~ki~ivTgR~~~~~r~~T~~~L~~lG 143 (262)
T 3ocu_A 115 SHNGKVFYVTNRKDSTEKSGTIDDMKRLG 143 (262)
T ss_dssp HTTEEEEEEEEEETTTTHHHHHHHHHHHT
T ss_pred HCCCeEEEEeCCCccchHHHHHHHHHHcC
Confidence 5 5999999987654 4444455544
No 92
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=90.65 E-value=0.33 Score=47.22 Aligned_cols=86 Identities=20% Similarity=0.105 Sum_probs=59.0
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.+||+.+.+. +.++|+|++...++..+++.+.-.. +|.. +++.++... .... ...++-+...+|.+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~--~~~~~~~~~~l~~~~ 164 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI-NKIN-IVTRDDVSY-GKPD--PDLFLAAAKKIGAPI 164 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT-TSSC-EECGGGSSC-CTTS--THHHHHHHHHTTCCG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh-hhhe-eeccccCCC-CCCC--hHHHHHHHHHhCCCH
Confidence 57899999999999875 9999999999999999999876554 5654 444332211 1110 01222333356776
Q ss_pred CcEEEEeCCCCcc
Q 000938 1035 SAVVIIDDSVRVW 1047 (1218)
Q Consensus 1035 srVVIVDDspdVW 1047 (1218)
+.+|.|+|+..-.
T Consensus 165 ~~~i~iGD~~~Di 177 (233)
T 3s6j_A 165 DECLVIGDAIWDM 177 (233)
T ss_dssp GGEEEEESSHHHH
T ss_pred HHEEEEeCCHHhH
Confidence 8899999997433
No 93
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=90.19 E-value=0.38 Score=45.71 Aligned_cols=84 Identities=18% Similarity=0.158 Sum_probs=58.2
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+..+|++.++|+.+.+. +.++|+|++...++..+++.+.-.. +|.. +++.++... .... + ..++.+-..+|.+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 162 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQG-FFDI-VLSGEEFKE-SKPN-P-EIYLTALKQLNVQA 162 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGCSS-CTTS-S-HHHHHHHHHHTCCG
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHh-heee-EeecccccC-CCCC-h-HHHHHHHHHcCCCh
Confidence 36899999999999876 9999999999999999999886554 5654 555443221 1110 0 1122232345766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.++.|+|+..
T Consensus 163 ~~~~~iGD~~~ 173 (214)
T 3e58_A 163 SRALIIEDSEK 173 (214)
T ss_dssp GGEEEEECSHH
T ss_pred HHeEEEeccHh
Confidence 88999999964
No 94
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=89.79 E-value=0.34 Score=47.19 Aligned_cols=83 Identities=16% Similarity=0.124 Sum_probs=58.0
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+...|++.++|+.+.+.|.++|+|++...++..+++.+.-.. +|.. ++..++... ..+. + ..++-+...+|.+ +
T Consensus 106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~~ 180 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDR-YFKK-IILSEDLGV-LKPR-P-EIFHFALSATQSELR 180 (240)
T ss_dssp CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSE-EEEGGGTTC-CTTS-H-HHHHHHHHHTTCCGG
T ss_pred CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHh-hcee-EEEeccCCC-CCCC-H-HHHHHHHHHcCCCcc
Confidence 567899999999999889999999999999999999886554 5654 554433221 1110 0 1122232346766 8
Q ss_pred cEEEEeCCC
Q 000938 1036 AVVIIDDSV 1044 (1218)
Q Consensus 1036 rVVIVDDsp 1044 (1218)
.+|.|+|++
T Consensus 181 ~~~~iGD~~ 189 (240)
T 3qnm_A 181 ESLMIGDSW 189 (240)
T ss_dssp GEEEEESCT
T ss_pred cEEEECCCc
Confidence 999999995
No 95
>3qbz_A DDK kinase regulatory subunit DBF4; FHA domain,RAD53, replication checkpoint, cell cycle; 2.69A {Saccharomyces cerevisiae}
Probab=89.51 E-value=0.51 Score=48.36 Aligned_cols=73 Identities=25% Similarity=0.125 Sum_probs=49.9
Q ss_pred hhhcc-CceeeeeccccCCCCCCC--Cc------h-HHHHHHHhCCEEecccCCCccEEEeCCCC--------CHHHHHH
Q 000938 1125 RKILA-GCRIVFSRVFPVGEANPH--LH------P-LWQTAEQFGAVCTKHIDDQVTHVVANSLG--------TDKVNWA 1186 (1218)
Q Consensus 1125 rqILk-GCvIvFSGIfP~g~~nPe--r~------~-LwkLAeqLGAtVssdVd~kVTHLVAss~g--------TeKVk~A 1186 (1218)
+++|. +++|+|-+.-+.. ... +. . +.+....+||.+..-|+.+|||||++.+- ++-+..|
T Consensus 56 Rkifk~~~vfYFDt~~~~~--~~~~~k~kl~K~~~llkr~f~~LGA~I~~FFd~~VTiVIT~R~i~~~~~~~~~Dil~~A 133 (160)
T 3qbz_A 56 KKIMKRDSRIYFDITDDVE--MNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRA 133 (160)
T ss_dssp HHHHHHHCEEEECCCCSSC--CCHHHHHHHHHHHHHHHHHHHTTTCEEESSCCTTCCEEEESSCSSCGGGSCTTSHHHHH
T ss_pred HHhCccCcEEEecCCChhh--hhHHHHHHHHHHHHHHHHHHHHcCCEeeeeccCCeEEEEecCcCcccccCCchhHHHHH
Confidence 45887 8999998752210 100 00 1 22455699999999999999999999743 3346788
Q ss_pred HHcCCcEEcHHHH
Q 000938 1187 LSTGRFVVHPGWV 1199 (1218)
Q Consensus 1187 lk~GIkIVSPdWL 1199 (1218)
.+.+++|=+.+=+
T Consensus 134 ~~~~mKVW~yeK~ 146 (160)
T 3qbz_A 134 KKNYMKVWSYEKA 146 (160)
T ss_dssp HHTTCEEEEHHHH
T ss_pred HHcCceecchHHH
Confidence 8889988665544
No 96
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=89.23 E-value=0.13 Score=52.29 Aligned_cols=68 Identities=15% Similarity=0.113 Sum_probs=44.3
Q ss_pred HHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCC
Q 000938 966 FLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 1043 (1218)
Q Consensus 966 FLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDs 1043 (1218)
-|+.|.+ .|.+.|.|+.....+..+++.|.-.. +|.. .. -++ ..++.+...+|.+ +.++.|.|+
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-~~~~-------~k--~k~----~~~~~~~~~~~~~~~~~~~vGD~ 125 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL-IYQG-------QD--DKV----QAYYDICQKLAIAPEQTGYIGDD 125 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-EECS-------CS--SHH----HHHHHHHHHHCCCGGGEEEEESS
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-EeeC-------CC--CcH----HHHHHHHHHhCCCHHHEEEEcCC
Confidence 3777765 59999999999999999999886542 3321 00 000 1223333345666 789999998
Q ss_pred CCcc
Q 000938 1044 VRVW 1047 (1218)
Q Consensus 1044 pdVW 1047 (1218)
..-.
T Consensus 126 ~nDi 129 (195)
T 3n07_A 126 LIDW 129 (195)
T ss_dssp GGGH
T ss_pred HHHH
Confidence 6433
No 97
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=89.19 E-value=0.51 Score=47.74 Aligned_cols=84 Identities=14% Similarity=0.188 Sum_probs=57.3
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+.++||+.++|+.+.+. |.++|.|++...++..+++.+.-.. +|.. +++.+++.. .+.. . ..++.+...+|.+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~-~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~~~~~ 187 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH-LFSE-MLGGQSLPE-IKPH-P-APFYYLCGKFGLYP 187 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECTTTSSS-CTTS-S-HHHHHHHHHHTCCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchh-eEEE-EEecccCCC-CCcC-H-HHHHHHHHHhCcCh
Confidence 57889999999999865 9999999999999999999886543 5653 555443221 1110 0 1122222345766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.+++|+|+..
T Consensus 188 ~~~~~vGD~~~ 198 (243)
T 2hsz_A 188 KQILFVGDSQN 198 (243)
T ss_dssp GGEEEEESSHH
T ss_pred hhEEEEcCCHH
Confidence 88999999963
No 98
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=89.19 E-value=0.49 Score=47.10 Aligned_cols=84 Identities=19% Similarity=0.225 Sum_probs=57.7
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+.+.||+.++|+.+.+. |.++|.|++.+.++..+++.+.-.. +|.. +++.++... .++ .+ ..++.+...+|.+
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~-i~~~~~~~~-~Kp-~~-~~~~~~~~~~~~~~ 156 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSG-YFDL-IVGGDTFGE-KKP-SP-TPVLKTLEILGEEP 156 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECTTSSCT-TCC-TT-HHHHHHHHHHTCCG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHH-HheE-EEecCcCCC-CCC-Ch-HHHHHHHHHhCCCc
Confidence 67899999999999865 9999999999999999999886543 5654 555443221 111 01 1122222245666
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.+++|+|+..
T Consensus 157 ~~~~~vGD~~~ 167 (222)
T 2nyv_A 157 EKALIVGDTDA 167 (222)
T ss_dssp GGEEEEESSHH
T ss_pred hhEEEECCCHH
Confidence 88999999954
No 99
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=89.12 E-value=0.41 Score=46.71 Aligned_cols=83 Identities=14% Similarity=0.154 Sum_probs=57.7
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccC-CC-
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG-ME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLG-RD- 1034 (1218)
+...|++.++|+.+.+.|.++|.|++...++..+++.+.-.. +|.. ++..++... .... + ..++-+...+| .+
T Consensus 102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~g~~~~ 176 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFP-FFKD-IFVSEDTGF-QKPM-K-EYFNYVFERIPQFSA 176 (238)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGG-GCSE-EEEGGGTTS-CTTC-H-HHHHHHHHTSTTCCG
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHh-hhhe-EEEecccCC-CCCC-h-HHHHHHHHHcCCCCh
Confidence 568899999999998779999999999999999999876543 5654 554433221 1110 0 11222333567 66
Q ss_pred CcEEEEeCCC
Q 000938 1035 SAVVIIDDSV 1044 (1218)
Q Consensus 1035 srVVIVDDsp 1044 (1218)
+.+|.|+|+.
T Consensus 177 ~~~i~vGD~~ 186 (238)
T 3ed5_A 177 EHTLIIGDSL 186 (238)
T ss_dssp GGEEEEESCT
T ss_pred hHeEEECCCc
Confidence 8999999996
No 100
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=89.11 E-value=0.48 Score=47.11 Aligned_cols=63 Identities=16% Similarity=0.221 Sum_probs=47.5
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcCC
Q 000938 904 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 982 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTAG 982 (1218)
.+.+++||||||+.... +. + ...-|++.+.|+++.+ -+.|+|+|.-
T Consensus 3 ~k~i~~DlDGTL~~~~~-----~~---i-------------------------~~~~~~~~~al~~l~~~G~~iii~TgR 49 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHRY-----PR---I-------------------------GEEIPFAVETLKLLQQEKHRLILWSVR 49 (142)
T ss_dssp CCEEEECCBTTTBCSCT-----TS---C-------------------------CCBCTTHHHHHHHHHHTTCEEEECCSC
T ss_pred CeEEEEECcCCCCCCCC-----cc---c-------------------------cccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999997531 00 0 0134789999999975 5999999998
Q ss_pred cHHHHHHHHHHHcCCCc
Q 000938 983 NKLYATEMAKVLDPKGV 999 (1218)
Q Consensus 983 treYAd~VLdiLDP~g~ 999 (1218)
.......+++.|+..+.
T Consensus 50 ~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 50 EGELLDEAIEWCRARGL 66 (142)
T ss_dssp CHHHHHHHHHHHHTTTC
T ss_pred CcccHHHHHHHHHHcCC
Confidence 87777788888888763
No 101
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=88.92 E-value=0.45 Score=46.76 Aligned_cols=84 Identities=19% Similarity=0.186 Sum_probs=57.8
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|.. +++.++... ... ....++-+...+|.+
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp--~~~~~~~~~~~lg~~~ 177 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDT-RLTV-IAGDDSVER-GKP--HPDMALHVARGLGIPP 177 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGG-TCSE-EECTTTSSS-CTT--SSHHHHHHHHHHTCCG
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchh-heee-EEeCCCCCC-CCC--CHHHHHHHHHHcCCCH
Confidence 35789999999999875 9999999999999999999886543 5654 554433211 111 001122233346776
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.+|.|+|+..
T Consensus 178 ~~~i~vGD~~~ 188 (237)
T 4ex6_A 178 ERCVVIGDGVP 188 (237)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEcCCHH
Confidence 89999999974
No 102
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=88.65 E-value=0.37 Score=50.75 Aligned_cols=84 Identities=11% Similarity=0.149 Sum_probs=53.8
Q ss_pred HhhhhccCceeeeeccccCCCCCCCCchHHHHHHHhCCEEec--ccC--------CCccEEEeCCCCCH---HHHHHHH-
Q 000938 1123 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTK--HID--------DQVTHVVANSLGTD---KVNWALS- 1188 (1218)
Q Consensus 1123 iRrqILkGCvIvFSGIfP~g~~nPer~~LwkLAeqLGAtVss--dVd--------~kVTHLVAss~gTe---KVk~Alk- 1188 (1218)
.+.++|+|+.|++++-+-. .|....+..+++..||+|.. .+. +.-.+||+...... +++....
T Consensus 109 ~~~~LF~G~~f~it~~~~~---~p~~~~l~~iI~~~GG~v~~~p~~~~~~~~~~~~~~~~vis~~~d~~~~~~f~~~~~~ 185 (220)
T 3l41_A 109 QGPSLLEDYVVYLTSKTVA---PENVPAVISIVKSNGGVCSTLNVYNKRLARHLEDGNVVLITCNEDSHIWTNFLDNASQ 185 (220)
T ss_dssp HCSCTTTTSEEEEETTSSC---GGGHHHHHHHHHHTTCEEEEECSCCHHHHHHHHHCCEEEEECGGGHHHHTTTHHHHTT
T ss_pred cCchhhhheeEEEeccccC---CCCCceEEEEEecCCcEechhhHHHHHHHHhcccCCEEEEEeCCcchHHHHhhccccc
Confidence 3478999999999985400 12356788999999999987 111 12246776632211 1222222
Q ss_pred -cCCcEEcHHHHHHHHHhcccC
Q 000938 1189 -TGRFVVHPGWVEASALLYRRA 1209 (1218)
Q Consensus 1189 -~GIkIVSPdWLedCl~~wkRV 1209 (1218)
.++.||+++||..|+...+--
T Consensus 186 ~~~~~i~~~e~ll~~il~q~l~ 207 (220)
T 3l41_A 186 NKTIFLQNYDWLIKTVLRQEID 207 (220)
T ss_dssp CTTEEEEEHHHHHHHHHHTCCC
T ss_pred cceEEEechhHHHHHHHHHHcC
Confidence 356799999999999865443
No 103
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=88.54 E-value=0.33 Score=47.28 Aligned_cols=88 Identities=14% Similarity=0.098 Sum_probs=58.6
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCC-C-CCCCCCCCcccccccccCCC
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD-P-FDGDERVPKSKDLEGVLGME 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~-~-~dG~Er~~yiKDLsrVLGRD 1034 (1218)
+.++||+.++|+.+.+.|.++|.|++.+.++..+++.+.-.. +|...++..++... . ..+ .+..+.+=+++ ++..
T Consensus 68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~p-~p~~~~~~l~~-l~~~ 144 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLR-QKDPKRQSVIA-FKSL 144 (206)
T ss_dssp CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EEEEEEEECTTSCEEEEECC-SSSHHHHHHHH-HHHT
T ss_pred cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcc-eecceeEEcCCceEEeeecC-CCchHHHHHHH-HHhc
Confidence 567999999999998779999999999999999999987665 77545554322210 0 001 01122222332 3333
Q ss_pred -CcEEEEeCCCCcc
Q 000938 1035 -SAVVIIDDSVRVW 1047 (1218)
Q Consensus 1035 -srVVIVDDspdVW 1047 (1218)
..++.|+|+..-.
T Consensus 145 ~~~~~~iGD~~~Di 158 (206)
T 1rku_A 145 YYRVIAAGDSYNDT 158 (206)
T ss_dssp TCEEEEEECSSTTH
T ss_pred CCEEEEEeCChhhH
Confidence 7899999997433
No 104
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=88.47 E-value=0.32 Score=48.47 Aligned_cols=83 Identities=20% Similarity=0.247 Sum_probs=56.6
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+. |.++|.|++...++..+++.+.-.. +|.. ++..++... .+.. + ..++-+...+|.+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~g~~~ 167 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDD-FFEH-VIISDFEGV-KKPH-P-KIFKKALKAFNVKP 167 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGG-GCSE-EEEGGGGTC-CTTC-H-HHHHHHHHHHTCCG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHh-hccE-EEEeCCCCC-CCCC-H-HHHHHHHHHcCCCc
Confidence 45789999999999865 9999999999999999999887543 6654 554433211 1110 0 0112222245766
Q ss_pred CcEEEEeCCC
Q 000938 1035 SAVVIIDDSV 1044 (1218)
Q Consensus 1035 srVVIVDDsp 1044 (1218)
+.+|.|+|+.
T Consensus 168 ~~~i~iGD~~ 177 (241)
T 2hoq_A 168 EEALMVGDRL 177 (241)
T ss_dssp GGEEEEESCT
T ss_pred ccEEEECCCc
Confidence 8899999997
No 105
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=88.34 E-value=0.39 Score=46.56 Aligned_cols=86 Identities=17% Similarity=0.083 Sum_probs=57.7
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+..+|++.++|+.+.+.|.++|.|++.+.++..+++.+.-.. +|.. +++.+++. ..+.+ + ..++-+...+|.+ +
T Consensus 82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~KP~-~-~~~~~~~~~~~~~~~ 156 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMM-RMAV-TISADDTP-KRKPD-P-LPLLTALEKVNVAPQ 156 (209)
T ss_dssp CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGG-GEEE-EECGGGSS-CCTTS-S-HHHHHHHHHTTCCGG
T ss_pred CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHh-hccE-EEecCcCC-CCCCC-c-HHHHHHHHHcCCCcc
Confidence 578999999999998669999999999999999998775433 5654 55443321 11110 0 1122222345766 8
Q ss_pred cEEEEeCCCCcc
Q 000938 1036 AVVIIDDSVRVW 1047 (1218)
Q Consensus 1036 rVVIVDDspdVW 1047 (1218)
.++.|+|+..-.
T Consensus 157 ~~i~vGD~~~Di 168 (209)
T 2hdo_A 157 NALFIGDSVSDE 168 (209)
T ss_dssp GEEEEESSHHHH
T ss_pred cEEEECCChhhH
Confidence 899999996433
No 106
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=88.31 E-value=0.55 Score=45.92 Aligned_cols=84 Identities=13% Similarity=0.148 Sum_probs=57.9
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|.. ++..++... .++. + ..++-+...+|.+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 172 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSG-LFDH-VLSVDAVRL-YKTA-P-AAYALAPRAFGVPA 172 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTT-TCSE-EEEGGGTTC-CTTS-H-HHHTHHHHHHTSCG
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHh-hcCE-EEEecccCC-CCcC-H-HHHHHHHHHhCCCc
Confidence 56789999999999876 9999999999999999999877654 5654 555443221 1110 0 0122222245766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.+|.|+|+..
T Consensus 173 ~~~~~vGD~~~ 183 (233)
T 3umb_A 173 AQILFVSSNGW 183 (233)
T ss_dssp GGEEEEESCHH
T ss_pred ccEEEEeCCHH
Confidence 88999999964
No 107
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=88.19 E-value=0.081 Score=54.07 Aligned_cols=38 Identities=8% Similarity=-0.014 Sum_probs=31.1
Q ss_pred EecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHc
Q 000938 958 KLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLD 995 (1218)
Q Consensus 958 KlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLD 995 (1218)
...|++.++|+.+.+ .|.++|.|++.+.++..+++.|.
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~ 126 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLA 126 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 357899999999975 59999999998887777776653
No 108
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=87.77 E-value=0.35 Score=46.90 Aligned_cols=27 Identities=7% Similarity=0.178 Sum_probs=24.1
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCc
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGN 983 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGt 983 (1218)
+.+.||+.++|+.|.+.|.+.|-|++.
T Consensus 68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~ 94 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNEHYDIYIATAAM 94 (180)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEECC-
T ss_pred CCCCcCHHHHHHHHHhcCCEEEEeCCC
Confidence 568899999999999889999999983
No 109
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=87.25 E-value=0.42 Score=48.07 Aligned_cols=86 Identities=14% Similarity=0.005 Sum_probs=58.7
Q ss_pred EEecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+ .|.++|+|++...++..+++.+.-.. +|..++++.++........ . ..++-+-..+|.+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~i~~~~~~~~~~Kp~-~-~~~~~~~~~lgi~~ 185 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE-LAGEHIYDPSWVGGRGKPH-P-DLYTFAAQQLGILP 185 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-HHCSCEECGGGGTTCCTTS-S-HHHHHHHHHTTCCG
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-hccceEEeHhhcCcCCCCC-h-HHHHHHHHHcCCCH
Confidence 5789999999999986 69999999999999999999876543 5655355443221011110 0 1122233346766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.+|.|+|+..
T Consensus 186 ~~~i~iGD~~~ 196 (259)
T 4eek_A 186 ERCVVIEDSVT 196 (259)
T ss_dssp GGEEEEESSHH
T ss_pred HHEEEEcCCHH
Confidence 88999999974
No 110
>3oq0_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.70A {Saccharomyces cerevisiae}
Probab=87.24 E-value=0.83 Score=46.50 Aligned_cols=80 Identities=21% Similarity=0.042 Sum_probs=54.1
Q ss_pred hhhc-cCceeeeeccccCCCCCCC--------CchHHHHHHHhCCEEecccCCCccEEEeCCC--------CCHHHHHHH
Q 000938 1125 RKIL-AGCRIVFSRVFPVGEANPH--------LHPLWQTAEQFGAVCTKHIDDQVTHVVANSL--------GTDKVNWAL 1187 (1218)
Q Consensus 1125 rqIL-kGCvIvFSGIfP~g~~nPe--------r~~LwkLAeqLGAtVssdVd~kVTHLVAss~--------gTeKVk~Al 1187 (1218)
++|+ +..+|+|-+.-.... +.. ...|.+....+||+|..-|+..|||||+..+ .++=+..|.
T Consensus 18 rkIM~r~s~iYFdt~~~~~~-~~~~~~~l~k~~~llkk~f~~LGa~I~~FFd~~VTiIITrR~~~~~~~yp~~DIL~rAr 96 (151)
T 3oq0_A 18 GSHMKRDSRIYFDITDDVEM-NTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAK 96 (151)
T ss_dssp ---CCCCCEEEECCCCSSCC-CHHHHHHHHHHHHHHHHHHHHHTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHH
T ss_pred HHHhccCCEEEEeCCCcchh-hHHHHHHHHHHHHHHHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHH
Confidence 4677 888999976421110 000 0123355679999999999999999999863 344567899
Q ss_pred HcCCcEEcHHHHHHHHHh
Q 000938 1188 STGRFVVHPGWVEASALL 1205 (1218)
Q Consensus 1188 k~GIkIVSPdWLedCl~~ 1205 (1218)
+.|++|=+.+=|..-+..
T Consensus 97 ~~~mKIWs~EKl~RfL~~ 114 (151)
T 3oq0_A 97 KNYMKVWSYEKAARFLKN 114 (151)
T ss_dssp HTTCEEEEHHHHHHHHHT
T ss_pred HcCCeeecHHHHHHHHHh
Confidence 999999888877655443
No 111
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=86.91 E-value=0.35 Score=47.10 Aligned_cols=84 Identities=14% Similarity=0.243 Sum_probs=58.1
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|.. +++.++... ..+ ....++-+...+|.+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp--~~~~~~~~~~~lgi~~ 159 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAF-YFDA-IVGSSLDGK-LST--KEDVIRYAMESLNIKS 159 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEECTTSS-SCS--HHHHHHHHHHHHTCCG
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHh-heee-eeccCCCCC-CCC--CHHHHHHHHHHhCcCc
Confidence 56899999999999875 9999999999999999999877553 5654 554443211 110 001122233345766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.+|.|+|+..
T Consensus 160 ~~~i~iGD~~~ 170 (226)
T 3mc1_A 160 DDAIMIGDREY 170 (226)
T ss_dssp GGEEEEESSHH
T ss_pred ccEEEECCCHH
Confidence 89999999964
No 112
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=86.66 E-value=0.62 Score=45.80 Aligned_cols=83 Identities=12% Similarity=0.141 Sum_probs=56.0
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+..+|++.++|+.+.+. |.++|.|++...|+..+++.+.-.. +|.. ++..++.. ..+.. + ..++-+...+|.+
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~Kp~-~-~~~~~~~~~~~~~~ 168 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD-GFDH-LLSVDPVQ-VYKPD-N-RVYELAEQALGLDR 168 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEESGGGT-CCTTS-H-HHHHHHHHHHTSCG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHh-hhhe-EEEecccC-CCCCC-H-HHHHHHHHHcCCCc
Confidence 46889999999999864 9999999999999999999876543 5654 55433221 11110 0 0112222245666
Q ss_pred CcEEEEeCCC
Q 000938 1035 SAVVIIDDSV 1044 (1218)
Q Consensus 1035 srVVIVDDsp 1044 (1218)
+.+|+|+|+.
T Consensus 169 ~~~~~iGD~~ 178 (232)
T 1zrn_A 169 SAILFVASNA 178 (232)
T ss_dssp GGEEEEESCH
T ss_pred ccEEEEeCCH
Confidence 8899999986
No 113
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=86.49 E-value=0.44 Score=49.26 Aligned_cols=82 Identities=16% Similarity=0.227 Sum_probs=57.2
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+.+.||+.++|+.+.+.|.++|.|++.+.++..+++.++-.. +|.. ++..++... .+.+ +..+.+=+. .+|.+ +
T Consensus 120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~f~~-i~~~~~~~~-~KP~-p~~~~~~~~-~~~~~~~ 194 (260)
T 2gfh_A 120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQS-YFDA-IVIGGEQKE-EKPA-PSIFYHCCD-LLGVQPG 194 (260)
T ss_dssp CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSE-EEEGGGSSS-CTTC-HHHHHHHHH-HHTCCGG
T ss_pred CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHh-hhhe-EEecCCCCC-CCCC-HHHHHHHHH-HcCCChh
Confidence 467799999999999889999999999999999999987654 6765 454433221 1110 001222233 35666 8
Q ss_pred cEEEEeCC
Q 000938 1036 AVVIIDDS 1043 (1218)
Q Consensus 1036 rVVIVDDs 1043 (1218)
.+|+|+|+
T Consensus 195 ~~~~vGDs 202 (260)
T 2gfh_A 195 DCVMVGDT 202 (260)
T ss_dssp GEEEEESC
T ss_pred hEEEECCC
Confidence 99999995
No 114
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=86.08 E-value=1.1 Score=43.09 Aligned_cols=84 Identities=17% Similarity=0.171 Sum_probs=56.9
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+. +.++|+|++...++..+++.++-.. +|.. ++..++... .... ...++-+...+|.+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~~-~kp~--~~~~~~~~~~~~i~~ 167 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SFDA-LASAEKLPY-SKPH--PQVYLDCAAKLGVDP 167 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEECTTSSC-CTTS--THHHHHHHHHHTSCG
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHh-hCcE-EEeccccCC-CCCC--hHHHHHHHHHcCCCH
Confidence 46789999999999865 9999999999999999999876543 5654 444332211 1100 01223333345766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.++.|+|+..
T Consensus 168 ~~~i~iGD~~n 178 (226)
T 1te2_A 168 LTCVALEDSVN 178 (226)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEeCCHH
Confidence 88999999974
No 115
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=86.05 E-value=1.2 Score=42.61 Aligned_cols=88 Identities=19% Similarity=0.207 Sum_probs=58.1
Q ss_pred EecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCC-CceeeeeeeecCCCCC--CC-CCCCCCCcccccccccC
Q 000938 958 KLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPK-GVLFAGRVISRGDDGD--PF-DGDERVPKSKDLEGVLG 1032 (1218)
Q Consensus 958 KlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~-g~LF~~RIySRDdc~~--~~-dG~Er~~yiKDLsrVLG 1032 (1218)
.++|++.++|+.+.+. +.++|.|++...|+..+++.+.-. ..+|...++...+... +. ....+..+.+-|...+|
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 3789999999999865 999999999999999999988753 2355543432111000 00 00011134455555567
Q ss_pred CC-CcEEEEeCCCC
Q 000938 1033 ME-SAVVIIDDSVR 1045 (1218)
Q Consensus 1033 RD-srVVIVDDspd 1045 (1218)
.+ +.++.|.|+..
T Consensus 162 ~~~~~~~~vGD~~~ 175 (219)
T 3kd3_A 162 LIDGEVIAIGDGYT 175 (219)
T ss_dssp GCCSEEEEEESSHH
T ss_pred CCCCCEEEEECCHh
Confidence 55 88999999864
No 116
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=85.82 E-value=0.5 Score=46.09 Aligned_cols=85 Identities=19% Similarity=0.144 Sum_probs=56.1
Q ss_pred EEecCCHHHHHHHHhcc--ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccC--
Q 000938 957 TKLRPGIWTFLERASKL--FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG-- 1032 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~--YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLG-- 1032 (1218)
+...|++.++|+.+.+. +.++|+|++.+.++..+++.+.-.. +|...++ .++... .+.-....++-+...+|
T Consensus 92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~-~~~~~~--~~k~~~~~~~~~~~~lg~~ 167 (234)
T 2hcf_A 92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFPFGAF-ADDALD--RNELPHIALERARRMTGAN 167 (234)
T ss_dssp EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST-TCSCEEC-TTTCSS--GGGHHHHHHHHHHHHHCCC
T ss_pred CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh-hcCccee-cCCCcC--ccchHHHHHHHHHHHhCCC
Confidence 67889999999999976 9999999999999999999887654 5654233 222110 00000000122222457
Q ss_pred CC-CcEEEEeCCCC
Q 000938 1033 ME-SAVVIIDDSVR 1045 (1218)
Q Consensus 1033 RD-srVVIVDDspd 1045 (1218)
.+ +.++.|+|++.
T Consensus 168 ~~~~~~i~iGD~~~ 181 (234)
T 2hcf_A 168 YSPSQIVIIGDTEH 181 (234)
T ss_dssp CCGGGEEEEESSHH
T ss_pred CCcccEEEECCCHH
Confidence 55 88999999974
No 117
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=85.81 E-value=0.67 Score=46.03 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=56.1
Q ss_pred EEecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+..+||+.++|+.+.+ .|.++|.|++...++..+++.+.-.. +|.. ++..++... .++. + ..++-+...+|.+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~~~~~ 178 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR-VLDS-CLSADDLKI-YKPD-P-RIYQFACDRLGVNP 178 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGTTC-CTTS-H-HHHHHHHHHHTCCG
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH-HcCE-EEEccccCC-CCCC-H-HHHHHHHHHcCCCc
Confidence 4577999999999986 49999999999999999999876543 5654 554433211 1110 0 0112222245766
Q ss_pred CcEEEEeCCC
Q 000938 1035 SAVVIIDDSV 1044 (1218)
Q Consensus 1035 srVVIVDDsp 1044 (1218)
+.+|.|+|+.
T Consensus 179 ~~~~~iGD~~ 188 (240)
T 2no4_A 179 NEVCFVSSNA 188 (240)
T ss_dssp GGEEEEESCH
T ss_pred ccEEEEeCCH
Confidence 8899999986
No 118
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=85.41 E-value=1.1 Score=42.15 Aligned_cols=84 Identities=17% Similarity=0.135 Sum_probs=56.0
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+..+|++.++|+.+.+. +.++|+|++...+.. +++.+.-.. +|.. ++..++.. ..+.. ...++.+...+|.+
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~-~f~~-~~~~~~~~-~~Kp~--~~~~~~~~~~~~i~~ 157 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES-YFTE-ILTSQSGF-VRKPS--PEAATYLLDKYQLNS 157 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGG-GEEE-EECGGGCC-CCTTS--SHHHHHHHHHHTCCG
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchh-heee-EEecCcCC-CCCCC--cHHHHHHHHHhCCCc
Confidence 56899999999999875 999999999999999 888886543 5654 44333211 11100 01122333345766
Q ss_pred CcEEEEeCCCCc
Q 000938 1035 SAVVIIDDSVRV 1046 (1218)
Q Consensus 1035 srVVIVDDspdV 1046 (1218)
+.++.|+|+..-
T Consensus 158 ~~~~~iGD~~nD 169 (207)
T 2go7_A 158 DNTYYIGDRTLD 169 (207)
T ss_dssp GGEEEEESSHHH
T ss_pred ccEEEECCCHHH
Confidence 889999999643
No 119
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=85.37 E-value=0.58 Score=46.16 Aligned_cols=82 Identities=22% Similarity=0.273 Sum_probs=57.7
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+.+.||+.++|+.+.+.|.+.|.|++.+.++..+++.++-.. +|.. ++..+ . ..++ .+..+.+=++ .+|.+ +
T Consensus 83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~~~~--~-~~Kp-~p~~~~~~~~-~lg~~p~ 155 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHH-FFDG-IYGSS--P-EAPH-KADVIHQALQ-THQLAPE 155 (210)
T ss_dssp CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEEC--S-SCCS-HHHHHHHHHH-HTTCCGG
T ss_pred CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchh-heee-eecCC--C-CCCC-ChHHHHHHHH-HcCCCcc
Confidence 567899999999998889999999999999999999887554 6754 55433 1 1111 0111222233 46766 8
Q ss_pred cEEEEeCCCC
Q 000938 1036 AVVIIDDSVR 1045 (1218)
Q Consensus 1036 rVVIVDDspd 1045 (1218)
.+|+|+|+..
T Consensus 156 ~~~~vgDs~~ 165 (210)
T 2ah5_A 156 QAIIIGDTKF 165 (210)
T ss_dssp GEEEEESSHH
T ss_pred cEEEECCCHH
Confidence 8999999964
No 120
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=85.14 E-value=0.77 Score=44.22 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=56.6
Q ss_pred EEecCCHHHHHHHHhc--cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC
Q 000938 957 TKLRPGIWTFLERASK--LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk--~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD 1034 (1218)
+...|++.++|+.+.+ .|.++|+|++...++..+++.+.-.. +|.. ++.... . ++ ..++-+...+|.+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~-~~~~~k-p---k~----~~~~~~~~~lgi~ 173 (234)
T 3ddh_A 104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP-YFDH-IEVMSD-K---TE----KEYLRLLSILQIA 173 (234)
T ss_dssp CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGG-GCSE-EEEESC-C---SH----HHHHHHHHHHTCC
T ss_pred CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHh-hhhe-eeecCC-C---CH----HHHHHHHHHhCCC
Confidence 5678999999999987 69999999999999999999876543 5654 443221 0 11 1223333356776
Q ss_pred -CcEEEEeCCC
Q 000938 1035 -SAVVIIDDSV 1044 (1218)
Q Consensus 1035 -srVVIVDDsp 1044 (1218)
+.+|.|+|+.
T Consensus 174 ~~~~i~iGD~~ 184 (234)
T 3ddh_A 174 PSELLMVGNSF 184 (234)
T ss_dssp GGGEEEEESCC
T ss_pred cceEEEECCCc
Confidence 8999999995
No 121
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=84.93 E-value=1.2 Score=44.61 Aligned_cols=83 Identities=18% Similarity=0.137 Sum_probs=57.3
Q ss_pred EEecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+.+.||+.++|+.+.+ .|.+.|.|++.+.++..+++.+.-. +|.. +++.++.. ..+. .+..+.+=++ .+|.+
T Consensus 109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f~~-~~~~~~~~-~~Kp-~p~~~~~~~~-~l~~~~ 182 (240)
T 2hi0_A 109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG--SFDF-ALGEKSGI-RRKP-APDMTSECVK-VLGVPR 182 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT--TCSE-EEEECTTS-CCTT-SSHHHHHHHH-HHTCCG
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--ceeE-EEecCCCC-CCCC-CHHHHHHHHH-HcCCCH
Confidence 5678999999999975 5999999999999999999988754 5754 55544321 1111 0111222222 45766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.+|+|.|+..
T Consensus 183 ~~~~~vGDs~~ 193 (240)
T 2hi0_A 183 DKCVYIGDSEI 193 (240)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEcCCHH
Confidence 89999999963
No 122
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=84.80 E-value=0.49 Score=46.19 Aligned_cols=83 Identities=17% Similarity=0.206 Sum_probs=57.2
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+...|++.++|+.+.+.|.++|+|++...++..+++.+.-.. +|.. ++..+++. ..++. + ..++-+...+|.+ +
T Consensus 99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~-~~~~~~~~-~~kp~-~-~~~~~~~~~~~~~~~ 173 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKD-LFDS-ITTSEEAG-FFKPH-P-RIFELALKKAGVKGE 173 (234)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEHHHHT-BCTTS-H-HHHHHHHHHHTCCGG
T ss_pred CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHH-Hcce-eEeccccC-CCCcC-H-HHHHHHHHHcCCCch
Confidence 567899999999998779999999999999999999876543 5654 55433221 11110 0 0122233345766 8
Q ss_pred cEEEEeCCC
Q 000938 1036 AVVIIDDSV 1044 (1218)
Q Consensus 1036 rVVIVDDsp 1044 (1218)
.++.|+|+.
T Consensus 174 ~~~~vGD~~ 182 (234)
T 3u26_A 174 EAVYVGDNP 182 (234)
T ss_dssp GEEEEESCT
T ss_pred hEEEEcCCc
Confidence 999999996
No 123
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=84.34 E-value=0.8 Score=47.00 Aligned_cols=57 Identities=14% Similarity=0.115 Sum_probs=45.5
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcCCc
Q 000938 905 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMGN 983 (1218)
Q Consensus 905 LTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTAGt 983 (1218)
+.+++|||+||+.... .+.|...+.|+++.+ .+.++|.|.-.
T Consensus 6 kli~~DlDGTLl~~~~-------------------------------------~i~~~~~~~l~~l~~~g~~~~i~TGr~ 48 (227)
T 1l6r_A 6 RLAAIDVDGNLTDRDR-------------------------------------LISTKAIESIRSAEKKGLTVSLLSGNV 48 (227)
T ss_dssp CEEEEEHHHHSBCTTS-------------------------------------CBCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEECCCCCcCCCC-------------------------------------cCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5799999999997521 135667888988875 58999999999
Q ss_pred HHHHHHHHHHHcCCC
Q 000938 984 KLYATEMAKVLDPKG 998 (1218)
Q Consensus 984 reYAd~VLdiLDP~g 998 (1218)
...+..+++.|...+
T Consensus 49 ~~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 49 IPVVYALKIFLGING 63 (227)
T ss_dssp HHHHHHHHHHHTCCS
T ss_pred cHHHHHHHHHhCCCC
Confidence 999999998887554
No 124
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=83.52 E-value=0.84 Score=45.21 Aligned_cols=84 Identities=14% Similarity=0.142 Sum_probs=57.2
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCC--
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM-- 1033 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGR-- 1033 (1218)
+..+|++.++|+.+.+. +.++|+|++...++..+++.+.-.. +|.. +++.++... ..+. . ..++-+...+|.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~g~~~ 183 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDR-YFKY-IAGSNLDGT-RVNK-N-EVIQYVLDLCNVKD 183 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEECTTSC-CCCH-H-HHHHHHHHHHTCCC
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHh-hEEE-EEeccccCC-CCCC-H-HHHHHHHHHcCCCC
Confidence 57899999999999876 9999999999999999999887654 5664 554443321 1100 0 011222223454
Q ss_pred CCcEEEEeCCCC
Q 000938 1034 ESAVVIIDDSVR 1045 (1218)
Q Consensus 1034 DsrVVIVDDspd 1045 (1218)
.+.+|.|+|++.
T Consensus 184 ~~~~i~vGD~~~ 195 (240)
T 3sd7_A 184 KDKVIMVGDRKY 195 (240)
T ss_dssp GGGEEEEESSHH
T ss_pred CCcEEEECCCHH
Confidence 368999999974
No 125
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=83.51 E-value=1.8 Score=48.41 Aligned_cols=56 Identities=21% Similarity=0.300 Sum_probs=44.1
Q ss_pred CCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEc
Q 000938 902 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYT 980 (1218)
Q Consensus 902 ~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFT 980 (1218)
.++..+++|||+||++... .=||+.+||+.|.+ .+.+++.|
T Consensus 11 ~~~~~~l~D~DGvl~~g~~--------------------------------------~~p~a~~~l~~l~~~g~~~~~vT 52 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRGKK--------------------------------------PIAGASDALKLLNRNKIPYILLT 52 (352)
T ss_dssp -CCEEEEECCBTTTEETTE--------------------------------------ECTTHHHHHHHHHHTTCCEEEEC
T ss_pred ccCCEEEEECCCeeEcCCe--------------------------------------eCcCHHHHHHHHHHCCCEEEEEe
Confidence 3688999999999997631 12899999999975 58899999
Q ss_pred CCc----HHHHHHHHHHHc
Q 000938 981 MGN----KLYATEMAKVLD 995 (1218)
Q Consensus 981 AGt----reYAd~VLdiLD 995 (1218)
++. +.|++.+.+.|.
T Consensus 53 Nn~~~~~~~~~~~l~~~lg 71 (352)
T 3kc2_A 53 NGGGFSERARTEFISSKLD 71 (352)
T ss_dssp SCCSSCHHHHHHHHHHHHT
T ss_pred CCCCCCchHHHHHHHHhcC
Confidence 875 788888876554
No 126
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=83.43 E-value=0.89 Score=45.89 Aligned_cols=83 Identities=16% Similarity=0.134 Sum_probs=56.6
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+...|++.++|+.+. .|.++|.|++...++..+++.+.-.. +|.. ++..++... .+.. + ..++-+...+|.+ +
T Consensus 92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~-~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~~~~~~ 165 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTD-SFDA-VISVDAKRV-FKPH-P-DSYALVEEVLGVTPA 165 (253)
T ss_dssp CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGGTC-CTTS-H-HHHHHHHHHHCCCGG
T ss_pred CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchh-hccE-EEEccccCC-CCCC-H-HHHHHHHHHcCCCHH
Confidence 467899999999999 99999999999999999999876543 5654 554433211 1110 0 0122222245766 8
Q ss_pred cEEEEeCCCC
Q 000938 1036 AVVIIDDSVR 1045 (1218)
Q Consensus 1036 rVVIVDDspd 1045 (1218)
.+|+|+|+..
T Consensus 166 ~~~~vGD~~~ 175 (253)
T 1qq5_A 166 EVLFVSSNGF 175 (253)
T ss_dssp GEEEEESCHH
T ss_pred HEEEEeCChh
Confidence 8999999863
No 127
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=82.81 E-value=0.34 Score=46.90 Aligned_cols=87 Identities=11% Similarity=0.163 Sum_probs=56.7
Q ss_pred EEEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHH------HcCCCceeeeeeeecCCCCCCCCCCCCCCccccccc
Q 000938 956 WTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKV------LDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEG 1029 (1218)
Q Consensus 956 YVKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdi------LDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsr 1029 (1218)
++...|++.++|+.+.+.|.++|.|++...++..+++. +.-. .+|.. ++..+++.. .++. + ...+-+..
T Consensus 87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~-~~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~ 161 (211)
T 2i6x_A 87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLD-SFFDK-VYASCQMGK-YKPN-E-DIFLEMIA 161 (211)
T ss_dssp EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGG-GGSSE-EEEHHHHTC-CTTS-H-HHHHHHHH
T ss_pred hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHH-HHcCe-EEeecccCC-CCCC-H-HHHHHHHH
Confidence 56789999999999988899999999999998888776 3322 35654 444332211 1110 0 01222222
Q ss_pred ccCCC-CcEEEEeCCCCcc
Q 000938 1030 VLGME-SAVVIIDDSVRVW 1047 (1218)
Q Consensus 1030 VLGRD-srVVIVDDspdVW 1047 (1218)
.+|.+ +.+|.|+|++.-.
T Consensus 162 ~~~~~~~~~~~igD~~~Di 180 (211)
T 2i6x_A 162 DSGMKPEETLFIDDGPANV 180 (211)
T ss_dssp HHCCCGGGEEEECSCHHHH
T ss_pred HhCCChHHeEEeCCCHHHH
Confidence 45766 8899999997533
No 128
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=82.64 E-value=1.6 Score=44.29 Aligned_cols=57 Identities=16% Similarity=0.225 Sum_probs=42.5
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHh-ccceEEEEcCCc
Q 000938 905 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMGN 983 (1218)
Q Consensus 905 LTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLS-k~YEIVIFTAGt 983 (1218)
+.+++||||||+++.. .+.|...+.|+++. +...++|.|.-.
T Consensus 4 kli~~DlDGTLl~~~~-------------------------------------~i~~~~~~al~~l~~~G~~v~i~TGR~ 46 (231)
T 1wr8_A 4 KAISIDIDGTITYPNR-------------------------------------MIHEKALEAIRRAESLGIPIMLVTGNT 46 (231)
T ss_dssp CEEEEESTTTTBCTTS-------------------------------------CBCHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred eEEEEECCCCCCCCCC-------------------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 4689999999998631 02345667777765 468889999888
Q ss_pred HHHHHHHHHHHcCCC
Q 000938 984 KLYATEMAKVLDPKG 998 (1218)
Q Consensus 984 reYAd~VLdiLDP~g 998 (1218)
...+..+++.|....
T Consensus 47 ~~~~~~~~~~l~~~~ 61 (231)
T 1wr8_A 47 VQFAEAASILIGTSG 61 (231)
T ss_dssp HHHHHHHHHHHTCCS
T ss_pred hhHHHHHHHHcCCCC
Confidence 888888888886543
No 129
>3oq4_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.40A {Saccharomyces cerevisiae}
Probab=82.45 E-value=2 Score=43.03 Aligned_cols=54 Identities=22% Similarity=0.048 Sum_probs=42.8
Q ss_pred HHHHHHHhCCEEecccCCCccEEEeCCC--------CCHHHHHHHHcCCcEEcHHHHHHHHH
Q 000938 1151 LWQTAEQFGAVCTKHIDDQVTHVVANSL--------GTDKVNWALSTGRFVVHPGWVEASAL 1204 (1218)
Q Consensus 1151 LwkLAeqLGAtVssdVd~kVTHLVAss~--------gTeKVk~Alk~GIkIVSPdWLedCl~ 1204 (1218)
|.+-...+||+|..-|+..|||||+..+ .++=+..|.+.|++|=+.+=|..-+.
T Consensus 35 lk~~f~~LGa~I~~FFd~~VTiiITrR~~~~~~~~p~~DIL~rAr~~~mKIWs~EKl~RfL~ 96 (134)
T 3oq4_A 35 LKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKNYMKVWSYEKAARFLK 96 (134)
T ss_dssp HHHHHHHTTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHHHTTCEEEEHHHHHHHHH
T ss_pred HHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHHHcCCeeeeHHHHHHHHH
Confidence 4445679999999999999999999864 34456889999999988777765444
No 130
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=81.64 E-value=2.1 Score=41.10 Aligned_cols=84 Identities=18% Similarity=0.088 Sum_probs=55.8
Q ss_pred EEecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+ .+.++|+|++...++..+++.++-.. +|.. +++.++.. ...+. ...++.+-..+|.+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~-~~k~~--~~~~~~~~~~~~~~~ 162 (225)
T 3d6j_A 88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDD-WFDI-IIGGEDVT-HHKPD--PEGLLLAIDRLKACP 162 (225)
T ss_dssp CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTT-CCSE-EECGGGCS-SCTTS--THHHHHHHHHTTCCG
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchh-heee-eeehhhcC-CCCCC--hHHHHHHHHHhCCCh
Confidence 4578999999999975 59999999999999999998876543 4543 44333221 11110 01122233346766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.+|.|+|+..
T Consensus 163 ~~~i~iGD~~n 173 (225)
T 3d6j_A 163 EEVLYIGDSTV 173 (225)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEcCCHH
Confidence 88999999964
No 131
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=81.40 E-value=1 Score=44.58 Aligned_cols=82 Identities=10% Similarity=0.074 Sum_probs=55.9
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+...|++.++|+.+.+.|.++|+|++...++..+++.+.-. |.. +++.+.... .... + ..++-+-..+|.+ +
T Consensus 119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~---f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~~ 191 (254)
T 3umc_A 119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP---WDM-LLCADLFGH-YKPD-P-QVYLGACRLLDLPPQ 191 (254)
T ss_dssp CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC---CSE-ECCHHHHTC-CTTS-H-HHHHHHHHHHTCCGG
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC---cce-EEeeccccc-CCCC-H-HHHHHHHHHcCCChH
Confidence 46789999999999988999999999999999999988653 543 444332111 1100 0 1122233346776 8
Q ss_pred cEEEEeCCCC
Q 000938 1036 AVVIIDDSVR 1045 (1218)
Q Consensus 1036 rVVIVDDspd 1045 (1218)
.+|.|+|+..
T Consensus 192 ~~~~iGD~~~ 201 (254)
T 3umc_A 192 EVMLCAAHNY 201 (254)
T ss_dssp GEEEEESCHH
T ss_pred HEEEEcCchH
Confidence 9999999864
No 132
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=81.28 E-value=0.59 Score=46.37 Aligned_cols=84 Identities=13% Similarity=0.021 Sum_probs=55.6
Q ss_pred EecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHH---cCCC--ceeeeeeeecCCCCCCCCCCCCCCcccccccccC
Q 000938 958 KLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVL---DPKG--VLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG 1032 (1218)
Q Consensus 958 KlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiL---DP~g--~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLG 1032 (1218)
.+.|++.++|+.+.+.|.++|.|++...++..+++.| ...+ .+|.. ++..+++.. .+++ +..+ +-+-..+|
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~-i~~~~~~~~-~KP~-~~~~-~~~~~~~g 187 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEK-TYLSYEMKM-AKPE-PEIF-KAVTEDAG 187 (229)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSE-EEEHHHHTC-CTTC-HHHH-HHHHHHHT
T ss_pred hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCE-EEeecccCC-CCCC-HHHH-HHHHHHcC
Confidence 4679999999999877999999999999999888777 4443 24543 444332211 1110 0011 22222457
Q ss_pred CC-CcEEEEeCCCC
Q 000938 1033 ME-SAVVIIDDSVR 1045 (1218)
Q Consensus 1033 RD-srVVIVDDspd 1045 (1218)
.+ +.+|+|+|++.
T Consensus 188 ~~~~~~~~vGD~~~ 201 (229)
T 4dcc_A 188 IDPKETFFIDDSEI 201 (229)
T ss_dssp CCGGGEEEECSCHH
T ss_pred CCHHHeEEECCCHH
Confidence 66 89999999974
No 133
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=80.97 E-value=2.4 Score=44.49 Aligned_cols=59 Identities=24% Similarity=0.233 Sum_probs=43.2
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcC
Q 000938 903 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 981 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTA 981 (1218)
+.+.+++||||||++.... .-|...+.|+++.+ ...++|-|.
T Consensus 8 ~~~li~~DlDGTLl~~~~~-------------------------------------~~~~~~~~l~~l~~~G~~~~iaTG 50 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSHSY-------------------------------------DWQPAAPWLTRLREANVPVILCSS 50 (275)
T ss_dssp CCEEEEEECTTTTSCSSCC-------------------------------------SCCTTHHHHHHHHHTTCCEEEECS
T ss_pred CceEEEEeCCCCCCCCCCc-------------------------------------CCHHHHHHHHHHHHCCCeEEEEcC
Confidence 4578999999999975210 11345677888764 588999998
Q ss_pred CcHHHHHHHHHHHcCCC
Q 000938 982 GNKLYATEMAKVLDPKG 998 (1218)
Q Consensus 982 GtreYAd~VLdiLDP~g 998 (1218)
-....+..+++.|...+
T Consensus 51 R~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 51 KTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp SCHHHHHHHHHHTTCTT
T ss_pred CCHHHHHHHHHHcCCCC
Confidence 88888888888776543
No 134
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=80.67 E-value=1.1 Score=46.78 Aligned_cols=83 Identities=11% Similarity=0.118 Sum_probs=56.5
Q ss_pred EEecCCHHHHHHHHh-ccceEEEEcCCcHHHHHHHHHHHcCC--CceeeeeeeecCCCCCCCCCCCCCCcccccccccCC
Q 000938 957 TKLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDPK--GVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 1033 (1218)
Q Consensus 957 VKlRPGLdEFLeeLS-k~YEIVIFTAGtreYAd~VLdiLDP~--g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGR 1033 (1218)
+.+.||+.++|+.+. ..|.++|+|++...++..+++.++-. ..+|.. ++.. +.. .+.+ +..|.+=++ .+|.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~-i~~~-~~~--~KP~-p~~~~~~~~-~lg~ 202 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG-HFDT-KIG--HKVE-SESYRKIAD-SIGC 202 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSE-EECG-GGC--CTTC-HHHHHHHHH-HHTS
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccE-EEec-CCC--CCCC-HHHHHHHHH-HhCc
Confidence 578899999999996 46999999999999999999865421 236754 5644 322 1110 111223333 3566
Q ss_pred C-CcEEEEeCCCC
Q 000938 1034 E-SAVVIIDDSVR 1045 (1218)
Q Consensus 1034 D-srVVIVDDspd 1045 (1218)
. +.+|+|+|+..
T Consensus 203 ~p~~~l~VgDs~~ 215 (261)
T 1yns_A 203 STNNILFLTDVTR 215 (261)
T ss_dssp CGGGEEEEESCHH
T ss_pred CcccEEEEcCCHH
Confidence 6 89999999954
No 135
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=79.74 E-value=1.4 Score=44.18 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=55.3
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+...|++.++|+.+...|.++|+|++...++..+++.+.-.. +|.. ++.... . ++ ..++-+-..+|.+ +
T Consensus 111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-i~~~~k-p---~~----~~~~~~~~~l~~~~~ 180 (251)
T 2pke_A 111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSD-LFPR-IEVVSE-K---DP----QTYARVLSEFDLPAE 180 (251)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGG-TCCC-EEEESC-C---SH----HHHHHHHHHHTCCGG
T ss_pred CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHH-hCce-eeeeCC-C---CH----HHHHHHHHHhCcCch
Confidence 567899999999998779999999999999999998876543 4543 443211 0 01 1122232346766 8
Q ss_pred cEEEEeCCC
Q 000938 1036 AVVIIDDSV 1044 (1218)
Q Consensus 1036 rVVIVDDsp 1044 (1218)
.+|.|.|+.
T Consensus 181 ~~i~iGD~~ 189 (251)
T 2pke_A 181 RFVMIGNSL 189 (251)
T ss_dssp GEEEEESCC
T ss_pred hEEEECCCc
Confidence 999999997
No 136
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=79.72 E-value=1.2 Score=43.13 Aligned_cols=81 Identities=16% Similarity=0.150 Sum_probs=55.0
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccc---cccccCC
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKD---LEGVLGM 1033 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKD---LsrVLGR 1033 (1218)
+...|++.++|+.+.+.|.++|.|++...++..+++.|. .+|.. +++.++.. ..+.+ +..+.+= +. .+|.
T Consensus 98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~---~~fd~-i~~~~~~~-~~KP~-~~~~~~~l~~~~-~lgi 170 (240)
T 3smv_A 98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG---VEFDH-IITAQDVG-SYKPN-PNNFTYMIDALA-KAGI 170 (240)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC---SCCSE-EEEHHHHT-SCTTS-HHHHHHHHHHHH-HTTC
T ss_pred CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC---CccCE-EEEccccC-CCCCC-HHHHHHHHHHHH-hcCC
Confidence 467899999999999889999999999999999888765 36654 55443221 11110 0001111 33 4677
Q ss_pred C-CcEEEEeCCC
Q 000938 1034 E-SAVVIIDDSV 1044 (1218)
Q Consensus 1034 D-srVVIVDDsp 1044 (1218)
+ +.+|.|+|+.
T Consensus 171 ~~~~~~~vGD~~ 182 (240)
T 3smv_A 171 EKKDILHTAESL 182 (240)
T ss_dssp CGGGEEEEESCT
T ss_pred CchhEEEECCCc
Confidence 6 8999999995
No 137
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=79.51 E-value=1.4 Score=42.81 Aligned_cols=81 Identities=6% Similarity=0.021 Sum_probs=54.6
Q ss_pred ecCCHHHHHHHHhcc-ceEEEEcCCc---HHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC
Q 000938 959 LRPGIWTFLERASKL-FEMHLYTMGN---KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1034 (1218)
Q Consensus 959 lRPGLdEFLeeLSk~-YEIVIFTAGt---reYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD 1034 (1218)
..|++.++|+.+.+. +.++|+|++. ..++..+++.++-.. +|.. ++..++... .+.. + ...+-+...+|.+
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~ 174 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME-FIDK-TFFADEVLS-YKPR-K-EMFEKVLNSFEVK 174 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGG-GCSE-EEEHHHHTC-CTTC-H-HHHHHHHHHTTCC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHH-Hhhh-heeccccCC-CCCC-H-HHHHHHHHHcCCC
Confidence 489999999999875 9999999999 999999998876543 5654 443322211 1110 0 1122222346766
Q ss_pred -CcEEEEeCCC
Q 000938 1035 -SAVVIIDDSV 1044 (1218)
Q Consensus 1035 -srVVIVDDsp 1044 (1218)
+.++.|+|++
T Consensus 175 ~~~~~~iGD~~ 185 (235)
T 2om6_A 175 PEESLHIGDTY 185 (235)
T ss_dssp GGGEEEEESCT
T ss_pred ccceEEECCCh
Confidence 8999999997
No 138
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=78.85 E-value=1.4 Score=43.85 Aligned_cols=84 Identities=15% Similarity=0.164 Sum_probs=55.9
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceee-eeeeecCCCCCCCCCCCCCCcccccccccCCC
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~-~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD 1034 (1218)
+...|++.++|+.+.+. |.++|+|++...++..+++. .-.. +|. +.+++.++.. ..... + ..++-+...+|.+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~d~i~~~~~~~-~~kp~-~-~~~~~~~~~lg~~ 182 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPG-MFHKELMVTAFDVK-YGKPN-P-EPYLMALKKGGLK 182 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTT-TCCGGGEECTTTCS-SCTTS-S-HHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHH-hcCcceEEeHHhCC-CCCCC-h-HHHHHHHHHcCCC
Confidence 56889999999999875 99999999999998888876 4433 662 2355444321 11110 0 1122233346776
Q ss_pred -CcEEEEeCCCC
Q 000938 1035 -SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 -srVVIVDDspd 1045 (1218)
+.+|.|+|+..
T Consensus 183 ~~~~i~vGD~~~ 194 (243)
T 3qxg_A 183 ADEAVVIENAPL 194 (243)
T ss_dssp GGGEEEEECSHH
T ss_pred HHHeEEEeCCHH
Confidence 89999999974
No 139
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=78.85 E-value=0.78 Score=44.12 Aligned_cols=86 Identities=8% Similarity=0.099 Sum_probs=55.9
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
....|++.++|+.+.+...++|.|++.+.++..+++.+.-.. +|.. ++..++... .+.. + ..++-+-..+|.+ +
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~-~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~~~~~~ 159 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGE-FLLA-FFTSSALGV-MKPN-P-AMYRLGLTLAQVRPE 159 (200)
T ss_dssp CCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGG-TCSC-EEEHHHHSC-CTTC-H-HHHHHHHHHHTCCGG
T ss_pred CccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHH-hcce-EEeecccCC-CCCC-H-HHHHHHHHHcCCCHH
Confidence 347899999999998666999999999999999999876433 5554 443322111 1110 0 0112222245766 8
Q ss_pred cEEEEeCCCCcc
Q 000938 1036 AVVIIDDSVRVW 1047 (1218)
Q Consensus 1036 rVVIVDDspdVW 1047 (1218)
.+|+|+|++.-.
T Consensus 160 ~~~~vgD~~~Di 171 (200)
T 3cnh_A 160 EAVMVDDRLQNV 171 (200)
T ss_dssp GEEEEESCHHHH
T ss_pred HeEEeCCCHHHH
Confidence 899999997533
No 140
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=78.82 E-value=2.4 Score=43.55 Aligned_cols=57 Identities=19% Similarity=0.163 Sum_probs=32.9
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHh-ccceEEEEcCC
Q 000938 904 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMG 982 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLS-k~YEIVIFTAG 982 (1218)
.+.+++||||||+.+.. .+-|...+.|+++. +...++|.|.-
T Consensus 5 ~kli~~DlDGTLl~~~~-------------------------------------~i~~~~~~al~~l~~~G~~~~iaTGR 47 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNEKN-------------------------------------ELAQATIDAVQAAKAQGIKVVLCTGR 47 (279)
T ss_dssp CCEEEECC------------------------------------------------CHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEEEcCcCCCCCCCC-------------------------------------cCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45799999999997742 02234455666654 45788888888
Q ss_pred cHHHHHHHHHHHcCC
Q 000938 983 NKLYATEMAKVLDPK 997 (1218)
Q Consensus 983 treYAd~VLdiLDP~ 997 (1218)
...-+..+++.|...
T Consensus 48 ~~~~~~~~~~~l~~~ 62 (279)
T 3mpo_A 48 PLTGVQPYLDAMDID 62 (279)
T ss_dssp CHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHcCCC
Confidence 877788888877654
No 141
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=78.81 E-value=1.1 Score=44.11 Aligned_cols=82 Identities=16% Similarity=0.130 Sum_probs=55.4
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+...|++.++|+.+.+.|.++|.|++...++..+++.+.-. |.. +++.++... .... . ..++-+...+|.+ +
T Consensus 115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~---f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~~ 187 (254)
T 3umg_A 115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP---WDV-IIGSDINRK-YKPD-P-QAYLRTAQVLGLHPG 187 (254)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC---CSC-CCCHHHHTC-CTTS-H-HHHHHHHHHTTCCGG
T ss_pred CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC---eeE-EEEcCcCCC-CCCC-H-HHHHHHHHHcCCChH
Confidence 45689999999999877999999999999999999988643 543 343322111 1110 0 1122233346776 8
Q ss_pred cEEEEeCCCC
Q 000938 1036 AVVIIDDSVR 1045 (1218)
Q Consensus 1036 rVVIVDDspd 1045 (1218)
.+|.|+|+..
T Consensus 188 ~~~~iGD~~~ 197 (254)
T 3umg_A 188 EVMLAAAHNG 197 (254)
T ss_dssp GEEEEESCHH
T ss_pred HEEEEeCChH
Confidence 9999999964
No 142
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=78.71 E-value=0.96 Score=43.79 Aligned_cols=84 Identities=12% Similarity=0.068 Sum_probs=56.2
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCCCc
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESA 1036 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRDsr 1036 (1218)
+...||+.+ |+.+.+.|.++|.|++.+.++..+++.+.-.. +|.. +++.+++.. .+.. + ..++-+-..+| .+.
T Consensus 73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~~-~~~ 145 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLR-YFKG-IFSAESVKE-YKPS-P-KVYKYFLDSIG-AKE 145 (201)
T ss_dssp CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGGTC-CTTC-H-HHHHHHHHHHT-CSC
T ss_pred cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHH-hCcE-EEehhhcCC-CCCC-H-HHHHHHHHhcC-CCc
Confidence 467899999 99997559999999999999999999877553 5654 555443221 1110 0 01122222457 778
Q ss_pred EEEEeCCCCcc
Q 000938 1037 VVIIDDSVRVW 1047 (1218)
Q Consensus 1037 VVIVDDspdVW 1047 (1218)
+|+|+|++.-.
T Consensus 146 ~~~vGD~~~Di 156 (201)
T 2w43_A 146 AFLVSSNAFDV 156 (201)
T ss_dssp CEEEESCHHHH
T ss_pred EEEEeCCHHHh
Confidence 99999997533
No 143
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=78.65 E-value=1.5 Score=41.42 Aligned_cols=63 Identities=22% Similarity=0.147 Sum_probs=41.7
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHh-ccceEEEEcCCc
Q 000938 905 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMGN 983 (1218)
Q Consensus 905 LTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLS-k~YEIVIFTAGt 983 (1218)
+.+++||||||+++... + + . . +.+.|+..+.|+++. +.+.++|.|.-.
T Consensus 2 k~i~~DlDGTL~~~~~~----~----~-------------------~--~--~~~~~~~~~~l~~l~~~Gi~~~iaTGR~ 50 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTS----D----Y-------------------R--N--VLPRLDVIEQLREYHQLGFEIVISTARN 50 (126)
T ss_dssp CEEEECSTTTTBCCCCS----C----G-------------------G--G--CCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEecCCCCCCCCCC----c----c-------------------c--c--CCCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 36899999999976420 0 0 0 0 134577888888876 458888988665
Q ss_pred HHH------------HHHHHHHHcCCC
Q 000938 984 KLY------------ATEMAKVLDPKG 998 (1218)
Q Consensus 984 reY------------Ad~VLdiLDP~g 998 (1218)
... +..|++.+...+
T Consensus 51 ~~~~nG~~~~~~~~~~~~i~~~~~~~~ 77 (126)
T 1xpj_A 51 MRTYEGNVGKINIHTLPIITEWLDKHQ 77 (126)
T ss_dssp TTTTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred hhhccccccccCHHHHHHHHHHHHHcC
Confidence 432 567777776555
No 144
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=77.71 E-value=3.4 Score=40.85 Aligned_cols=82 Identities=15% Similarity=0.113 Sum_probs=50.4
Q ss_pred EEEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC
Q 000938 956 WTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1034 (1218)
Q Consensus 956 YVKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD 1034 (1218)
.+...||+.++|+.+.+. |.++|.|++.+ ++..+++.+.-.. +|.. ++..++.. ..+.+ +..+.+=+. .+|.+
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~-~f~~-~~~~~~~~-~~Kp~-~~~~~~~~~-~~~~~ 166 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKK-YFDA-LALSYEIK-AVKPN-PKIFGFALA-KVGYP 166 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGG-GCSE-EC-------------CCHHHHHHH-HHCSS
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHh-HeeE-EEeccccC-CCCCC-HHHHHHHHH-HcCCC
Confidence 478999999999999875 99999999977 6888888876544 6754 55443321 11110 111222222 23443
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
. |+|+|++.
T Consensus 167 ~--~~vgD~~~ 175 (220)
T 2zg6_A 167 A--VHVGDIYE 175 (220)
T ss_dssp E--EEEESSCC
T ss_pred e--EEEcCCch
Confidence 3 89999986
No 145
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=77.39 E-value=3.5 Score=42.54 Aligned_cols=57 Identities=26% Similarity=0.220 Sum_probs=39.3
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHh-ccceEEEEcCC
Q 000938 904 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMG 982 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLS-k~YEIVIFTAG 982 (1218)
.+.+++||||||+.+.. . +-+...+.|+++. +...++|.|.-
T Consensus 6 ~kli~fDlDGTLl~~~~--~-----------------------------------i~~~~~~al~~l~~~G~~~~iaTGR 48 (290)
T 3dnp_A 6 KQLLALNIDGALLRSNG--K-----------------------------------IHQATKDAIEYVKKKGIYVTLVTNR 48 (290)
T ss_dssp CCEEEECCCCCCSCTTS--C-----------------------------------CCHHHHHHHHHHHHTTCEEEEBCSS
T ss_pred ceEEEEcCCCCCCCCCC--c-----------------------------------cCHHHHHHHHHHHHCCCEEEEECCC
Confidence 46799999999998742 1 1233445555554 45778888877
Q ss_pred cHHHHHHHHHHHcCC
Q 000938 983 NKLYATEMAKVLDPK 997 (1218)
Q Consensus 983 treYAd~VLdiLDP~ 997 (1218)
...-+..+++.+...
T Consensus 49 ~~~~~~~~~~~~~~~ 63 (290)
T 3dnp_A 49 HFRSAQKIAKSLKLD 63 (290)
T ss_dssp CHHHHHHHHHHTTCC
T ss_pred ChHHHHHHHHHcCCC
Confidence 777777788877765
No 146
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=76.98 E-value=2.3 Score=43.58 Aligned_cols=56 Identities=29% Similarity=0.193 Sum_probs=39.8
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHh-ccceEEEEcCC
Q 000938 904 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMG 982 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLS-k~YEIVIFTAG 982 (1218)
.+.+++||||||+.+.. . +-|...+.|+++. +.+.++|.|.-
T Consensus 5 ~kli~fDlDGTLl~~~~--~-----------------------------------i~~~~~~al~~l~~~G~~~~iaTGR 47 (279)
T 4dw8_A 5 YKLIVLDLDGTLTNSKK--E-----------------------------------ISSRNRETLIRIQEQGIRLVLASGR 47 (279)
T ss_dssp CCEEEECCCCCCSCTTS--C-----------------------------------CCHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEEeCCCCCCCCCC--c-----------------------------------cCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46799999999997742 0 1244556666664 45788888888
Q ss_pred cHHHHHHHHHHHcC
Q 000938 983 NKLYATEMAKVLDP 996 (1218)
Q Consensus 983 treYAd~VLdiLDP 996 (1218)
...-+..+++.|..
T Consensus 48 ~~~~~~~~~~~l~~ 61 (279)
T 4dw8_A 48 PTYGIVPLANELRM 61 (279)
T ss_dssp CHHHHHHHHHHTTG
T ss_pred ChHHHHHHHHHhCC
Confidence 87777888877653
No 147
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=76.93 E-value=2.1 Score=44.67 Aligned_cols=60 Identities=17% Similarity=0.108 Sum_probs=35.8
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHh-ccceEEEE
Q 000938 901 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLY 979 (1218)
Q Consensus 901 s~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLS-k~YEIVIF 979 (1218)
..+.+.+++||||||+.+.. .+ -|...+.|+++. +.+.++|.
T Consensus 18 ~~~~kli~~DlDGTLl~~~~--~i-----------------------------------~~~~~~al~~l~~~G~~v~ia 60 (285)
T 3pgv_A 18 QGMYQVVASDLDGTLLSPDH--FL-----------------------------------TPYAKETLKLLTARGINFVFA 60 (285)
T ss_dssp ---CCEEEEECCCCCSCTTS--CC-----------------------------------CHHHHHHHHHHHTTTCEEEEE
T ss_pred cCcceEEEEeCcCCCCCCCC--cC-----------------------------------CHHHHHHHHHHHHCCCEEEEE
Confidence 35667899999999998742 11 223344455543 34666666
Q ss_pred cCCcHHHHHHHHHHHcCC
Q 000938 980 TMGNKLYATEMAKVLDPK 997 (1218)
Q Consensus 980 TAGtreYAd~VLdiLDP~ 997 (1218)
|.-...-+..+++.|...
T Consensus 61 TGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 61 TGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp CSSCGGGGHHHHHHHCSC
T ss_pred cCCCHHHHHHHHHhcCCC
Confidence 666666666666666554
No 148
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=76.75 E-value=2.5 Score=42.55 Aligned_cols=38 Identities=13% Similarity=0.281 Sum_probs=34.1
Q ss_pred EEecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHH
Q 000938 957 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVL 994 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiL 994 (1218)
+.++||+.+||+.+.+ .|.++|.|++...++..+++-|
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l 114 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI 114 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcC
Confidence 6789999999999985 5999999999999999998844
No 149
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=76.60 E-value=3.6 Score=38.96 Aligned_cols=80 Identities=16% Similarity=0.095 Sum_probs=51.9
Q ss_pred ecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCCCcE
Q 000938 959 LRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAV 1037 (1218)
Q Consensus 959 lRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRDsrV 1037 (1218)
..|++.++|+.+.+. +.++|+|++. .++..+++.+.-.. +|.. +++.+++.. .... . ..++-+...+|.+ .+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~-~~ 155 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAA-YFTE-VVTSSSGFK-RKPN-P-ESMLYLREKYQIS-SG 155 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGG-GEEE-EECGGGCCC-CTTS-C-HHHHHHHHHTTCS-SE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHh-heee-eeeccccCC-CCCC-H-HHHHHHHHHcCCC-eE
Confidence 789999999999865 9999999886 57888888776543 5654 444332211 1100 0 1122232345666 89
Q ss_pred EEEeCCCC
Q 000938 1038 VIIDDSVR 1045 (1218)
Q Consensus 1038 VIVDDspd 1045 (1218)
+.|+|+..
T Consensus 156 ~~iGD~~~ 163 (190)
T 2fi1_A 156 LVIGDRPI 163 (190)
T ss_dssp EEEESSHH
T ss_pred EEEcCCHH
Confidence 99999964
No 150
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=75.74 E-value=3.7 Score=42.58 Aligned_cols=57 Identities=21% Similarity=0.147 Sum_probs=38.7
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhccceEEEEcCCcH
Q 000938 905 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNK 984 (1218)
Q Consensus 905 LTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk~YEIVIFTAGtr 984 (1218)
+.+++||||||+.+.. .+ -|...+.|++..+...++|.|.-..
T Consensus 3 kli~~DlDGTLl~~~~--~i-----------------------------------~~~~~~al~~~~~Gi~v~iaTGR~~ 45 (268)
T 1nf2_A 3 RVFVFDLDGTLLNDNL--EI-----------------------------------SEKDRRNIEKLSRKCYVVFASGRML 45 (268)
T ss_dssp CEEEEECCCCCSCTTS--CC-----------------------------------CHHHHHHHHHHTTTSEEEEECSSCH
T ss_pred cEEEEeCCCcCCCCCC--cc-----------------------------------CHHHHHHHHHHhCCCEEEEECCCCh
Confidence 4689999999997642 11 1334455555334578888888887
Q ss_pred HHHHHHHHHHcCCC
Q 000938 985 LYATEMAKVLDPKG 998 (1218)
Q Consensus 985 eYAd~VLdiLDP~g 998 (1218)
..+..+++.|...+
T Consensus 46 ~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 46 VSTLNVEKKYFKRT 59 (268)
T ss_dssp HHHHHHHHHHSSSC
T ss_pred HHHHHHHHHhCCCC
Confidence 77788887776654
No 151
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=75.56 E-value=2.9 Score=43.73 Aligned_cols=56 Identities=25% Similarity=0.207 Sum_probs=38.2
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcCCc
Q 000938 905 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMGN 983 (1218)
Q Consensus 905 LTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTAGt 983 (1218)
+.+++||||||+.+.. . +.|...+.|+++.+ ...+++.|.-.
T Consensus 5 kli~~DlDGTLl~~~~--~-----------------------------------i~~~~~~al~~l~~~G~~~~iaTGR~ 47 (288)
T 1nrw_A 5 KLIAIDLDGTLLNSKH--Q-----------------------------------VSLENENALRQAQRDGIEVVVSTGRA 47 (288)
T ss_dssp CEEEEECCCCCSCTTS--C-----------------------------------CCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEeCCCCCCCCCC--c-----------------------------------cCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689999999997742 0 12344556666643 47788888887
Q ss_pred HHHHHHHHHHHcCC
Q 000938 984 KLYATEMAKVLDPK 997 (1218)
Q Consensus 984 reYAd~VLdiLDP~ 997 (1218)
...+..+++.|...
T Consensus 48 ~~~~~~~~~~l~~~ 61 (288)
T 1nrw_A 48 HFDVMSIFEPLGIK 61 (288)
T ss_dssp HHHHHHHHGGGTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 77777777766543
No 152
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=75.38 E-value=2.8 Score=43.18 Aligned_cols=15 Identities=20% Similarity=0.565 Sum_probs=12.6
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++|||+||++..
T Consensus 2 k~i~~D~DGtL~~~~ 16 (263)
T 1zjj_A 2 VAIIFDMDGVLYRGN 16 (263)
T ss_dssp EEEEEECBTTTEETT
T ss_pred eEEEEeCcCceEeCC
Confidence 468999999999763
No 153
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=74.66 E-value=2.2 Score=43.83 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+.+.
T Consensus 5 ~kli~~DlDGTLl~~~ 20 (264)
T 3epr_A 5 YKGYLIDLDGTIYKGK 20 (264)
T ss_dssp CCEEEECCBTTTEETT
T ss_pred CCEEEEeCCCceEeCC
Confidence 4679999999999874
No 154
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=74.11 E-value=2.7 Score=41.13 Aligned_cols=80 Identities=15% Similarity=0.160 Sum_probs=50.8
Q ss_pred ecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-Cc
Q 000938 959 LRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SA 1036 (1218)
Q Consensus 959 lRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-sr 1036 (1218)
+.||+.++|+.+.+. |.++|+|++.. +..+++.+.-.. +|.. +++.++... ... .+ ..++-+-..+|.+ +.
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~-~f~~-i~~~~~~~~-~Kp-~~-~~~~~~~~~lgi~~~~ 165 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIID-DFHA-IVDPTTLAK-GKP-DP-DIFLTAAAMLDVSPAD 165 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTT-TCSE-ECCC-----------C-CHHHHHHHHHTSCGGG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHh-hcCE-EeeHhhCCC-CCC-Ch-HHHHHHHHHcCCCHHH
Confidence 689999999999876 99999999854 777888776544 5654 444332211 110 00 1122233346776 89
Q ss_pred EEEEeCCCC
Q 000938 1037 VVIIDDSVR 1045 (1218)
Q Consensus 1037 VVIVDDspd 1045 (1218)
+|+|+|+..
T Consensus 166 ~i~vGDs~~ 174 (233)
T 3nas_A 166 CAAIEDAEA 174 (233)
T ss_dssp EEEEECSHH
T ss_pred EEEEeCCHH
Confidence 999999963
No 155
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=73.89 E-value=4.8 Score=41.00 Aligned_cols=16 Identities=25% Similarity=0.362 Sum_probs=13.4
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||++..
T Consensus 8 ~kli~~DlDGTLl~~~ 23 (268)
T 3qgm_A 8 KKGYIIDIDGVIGKSV 23 (268)
T ss_dssp CSEEEEECBTTTEETT
T ss_pred CCEEEEcCcCcEECCC
Confidence 4579999999999763
No 156
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=72.88 E-value=5.5 Score=41.04 Aligned_cols=83 Identities=19% Similarity=0.124 Sum_probs=56.2
Q ss_pred EEecCCHHHHHHHHhcc--ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCC-
Q 000938 957 TKLRPGIWTFLERASKL--FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM- 1033 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~--YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGR- 1033 (1218)
+...|++.++|+.+.+. +.++|+|++.+.++..+++.++-. .|.. +++.++... ... .+ ..++-+...+|.
T Consensus 113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f~~-i~~~~~~~~-~kp-~~-~~~~~~~~~lgi~ 186 (275)
T 2qlt_A 113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--RPEY-FITANDVKQ-GKP-HP-EPYLKGRNGLGFP 186 (275)
T ss_dssp CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--CCSS-EECGGGCSS-CTT-SS-HHHHHHHHHTTCC
T ss_pred CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--ccCE-EEEcccCCC-CCC-Ch-HHHHHHHHHcCCC
Confidence 56789999999999875 899999999999999999988654 2543 554432211 110 00 112223234676
Q ss_pred ------C-CcEEEEeCCCC
Q 000938 1034 ------E-SAVVIIDDSVR 1045 (1218)
Q Consensus 1034 ------D-srVVIVDDspd 1045 (1218)
+ +.++.|.|++.
T Consensus 187 ~~~~~~~~~~~i~~GDs~n 205 (275)
T 2qlt_A 187 INEQDPSKSKVVVFEDAPA 205 (275)
T ss_dssp CCSSCGGGSCEEEEESSHH
T ss_pred ccccCCCcceEEEEeCCHH
Confidence 6 88999999974
No 157
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=72.73 E-value=2.5 Score=43.55 Aligned_cols=34 Identities=18% Similarity=0.099 Sum_probs=23.6
Q ss_pred HHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcC
Q 000938 963 IWTFLERASKLFEMHLYTMGNKLYATEMAKVLDP 996 (1218)
Q Consensus 963 LdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP 996 (1218)
..+.|+++.+...++|-|.-....+..+++.|..
T Consensus 24 ~~~~l~~~~~gi~v~iaTGR~~~~~~~~~~~l~l 57 (244)
T 1s2o_A 24 LQEYLGDRRGNFYLAYATGRSYHSARELQKQVGL 57 (244)
T ss_dssp HHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3456666666677888887777777778777543
No 158
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=71.65 E-value=3.1 Score=43.34 Aligned_cols=60 Identities=12% Similarity=0.110 Sum_probs=36.8
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHh-ccceEEEE
Q 000938 901 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLY 979 (1218)
Q Consensus 901 s~kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLS-k~YEIVIF 979 (1218)
..+.+.+++||||||+.+... . +-|...+-|+++. +...++|.
T Consensus 18 ~~~~kli~~DlDGTLl~~~~~-~-----------------------------------i~~~~~~al~~l~~~G~~v~ia 61 (283)
T 3dao_A 18 QGMIKLIATDIDGTLVKDGSL-L-----------------------------------IDPEYMSVIDRLIDKGIIFVVC 61 (283)
T ss_dssp -CCCCEEEECCBTTTBSTTCS-C-----------------------------------CCHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCceEEEEeCcCCCCCCCCC-c-----------------------------------CCHHHHHHHHHHHHCCCEEEEE
Confidence 456678999999999977420 1 1233444555543 45667777
Q ss_pred cCCcHHHHHHHHHHHcC
Q 000938 980 TMGNKLYATEMAKVLDP 996 (1218)
Q Consensus 980 TAGtreYAd~VLdiLDP 996 (1218)
|.-...-+..+++.|.+
T Consensus 62 TGR~~~~~~~~~~~l~~ 78 (283)
T 3dao_A 62 SGRQFSSEFKLFAPIKH 78 (283)
T ss_dssp CSSCHHHHHHHTGGGGG
T ss_pred cCCCHHHHHHHHHHcCC
Confidence 76666666666665544
No 159
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=71.61 E-value=4.2 Score=40.06 Aligned_cols=48 Identities=15% Similarity=0.009 Sum_probs=39.9
Q ss_pred EecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeee
Q 000938 958 KLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 1006 (1218)
Q Consensus 958 KlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIy 1006 (1218)
.++||+.++|+.+.+ .+.++|.|++...++..+++.+.-.. +|..++.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~ 140 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPE 140 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEE
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceE
Confidence 469999999999975 59999999999999999999987653 5555443
No 160
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=71.22 E-value=3.6 Score=42.74 Aligned_cols=17 Identities=24% Similarity=0.399 Sum_probs=13.8
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
+.+.+++||||||+++.
T Consensus 12 ~~kli~~DlDGTLl~~~ 28 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPAR 28 (262)
T ss_dssp -CEEEEEESBTTTBSTT
T ss_pred CeEEEEEeCccCCCCCC
Confidence 46789999999999763
No 161
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=71.02 E-value=7 Score=40.22 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=26.7
Q ss_pred HHHHHHHHh-ccceEEEEcCCcHHHHHHHHHHHcCC
Q 000938 963 IWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDPK 997 (1218)
Q Consensus 963 LdEFLeeLS-k~YEIVIFTAGtreYAd~VLdiLDP~ 997 (1218)
..+.|+++. +...++|.|.-....+..+++.|...
T Consensus 22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 456777765 46888899988888888888888754
No 162
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=71.01 E-value=6.1 Score=40.19 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=14.6
Q ss_pred CCCeEEEEeCCCceeecc
Q 000938 902 ARKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 902 ~kKLTLVLDLDETLIHSs 919 (1218)
.+..++++||||||+.+.
T Consensus 15 ~~~~~v~~DlDGTLl~~~ 32 (271)
T 1vjr_A 15 DKIELFILDMDGTFYLDD 32 (271)
T ss_dssp GGCCEEEECCBTTTEETT
T ss_pred cCCCEEEEcCcCcEEeCC
Confidence 345679999999999873
No 163
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=70.97 E-value=3.5 Score=42.01 Aligned_cols=15 Identities=33% Similarity=0.538 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+.+.
T Consensus 4 kli~~DlDGTLl~~~ 18 (258)
T 2pq0_A 4 KIVFFDIDGTLLDEQ 18 (258)
T ss_dssp CEEEECTBTTTBCTT
T ss_pred eEEEEeCCCCCcCCC
Confidence 578999999999874
No 164
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=70.57 E-value=1.5 Score=49.66 Aligned_cols=52 Identities=12% Similarity=0.006 Sum_probs=42.7
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceee-eeeeecC
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRG 1009 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~-~RIySRD 1009 (1218)
+.+.||+.++|+.|.+. |.++|.|++.+.++..+++.++-.. +|. ..+++.+
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~-~Fd~~~Ivs~d 267 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP-YFEADFIATAS 267 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG-GSCGGGEECHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH-hcCCCEEEecc
Confidence 56789999999999875 9999999999999999999886543 676 2466543
No 165
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=70.05 E-value=5.5 Score=40.65 Aligned_cols=18 Identities=22% Similarity=0.239 Sum_probs=14.9
Q ss_pred CCCeEEEEeCCCceeecc
Q 000938 902 ARKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 902 ~kKLTLVLDLDETLIHSs 919 (1218)
.+++.+++||||||+.+.
T Consensus 4 ~~~kli~~DlDGTLl~~~ 21 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAPR 21 (246)
T ss_dssp CCSEEEEEESBTTTBCTT
T ss_pred CCceEEEEECCCCcCCCC
Confidence 356789999999999763
No 166
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=69.21 E-value=10 Score=39.90 Aligned_cols=73 Identities=16% Similarity=0.231 Sum_probs=51.3
Q ss_pred EEecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCCC
Q 000938 957 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMES 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRDs 1035 (1218)
..++||+.++|+.|.+ .+.++|.|++.+.++..+++.+.-.. +|.. ++. . .+.+=+.+ ++...
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~~--------~-----~K~~~~~~-l~~~~ 225 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-VIAE-VLP--------H-----QKSEEVKK-LQAKE 225 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EECS-CCT--------T-----CHHHHHHH-HTTTC
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce-eeee-cCh--------H-----HHHHHHHH-HhcCC
Confidence 4589999999999986 49999999999999999999886532 3432 210 0 12222332 23226
Q ss_pred cEEEEeCCCC
Q 000938 1036 AVVIIDDSVR 1045 (1218)
Q Consensus 1036 rVVIVDDspd 1045 (1218)
.+++|.|+..
T Consensus 226 ~~~~vGDs~~ 235 (287)
T 3a1c_A 226 VVAFVGDGIN 235 (287)
T ss_dssp CEEEEECTTT
T ss_pred eEEEEECCHH
Confidence 7999999874
No 167
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=68.97 E-value=2.4 Score=43.31 Aligned_cols=82 Identities=13% Similarity=0.065 Sum_probs=53.4
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...||+.++|+.+.+. |.++|+|++.+. +..+++.+.-.. +|.. ++..+++.. .+.. +..+.+=+. .+|.+
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~-~f~~-~~~~~~~~~-~Kp~-~~~~~~~~~-~~g~~~ 178 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLRE-HFDF-VLTSEAAGW-PKPD-PRIFQEALR-LAHMEP 178 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGG-GCSC-EEEHHHHSS-CTTS-HHHHHHHHH-HHTCCG
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHH-hhhE-EEeecccCC-CCCC-HHHHHHHHH-HcCCCH
Confidence 57899999999999865 999999998874 677888776543 5654 444332211 1110 001222232 45766
Q ss_pred CcEEEEeCCC
Q 000938 1035 SAVVIIDDSV 1044 (1218)
Q Consensus 1035 srVVIVDDsp 1044 (1218)
+.+|+|+|++
T Consensus 179 ~~~~~vGD~~ 188 (263)
T 3k1z_A 179 VVAAHVGDNY 188 (263)
T ss_dssp GGEEEEESCH
T ss_pred HHEEEECCCc
Confidence 8999999996
No 168
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=68.63 E-value=3.1 Score=43.53 Aligned_cols=16 Identities=31% Similarity=0.384 Sum_probs=13.3
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+.+.
T Consensus 5 ~kli~~DlDGTLl~~~ 20 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLPD 20 (282)
T ss_dssp CCEEEECCCCCCSCTT
T ss_pred ceEEEEeCCCCCCCCC
Confidence 3579999999999764
No 169
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=67.81 E-value=4.5 Score=40.42 Aligned_cols=16 Identities=25% Similarity=0.270 Sum_probs=12.4
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
-+.+++||||||+.+.
T Consensus 7 ik~i~fDlDGTLld~~ 22 (259)
T 2ho4_A 7 LKAVLVDLNGTLHIED 22 (259)
T ss_dssp CCEEEEESSSSSCC--
T ss_pred CCEEEEeCcCcEEeCC
Confidence 4579999999999864
No 170
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=66.65 E-value=8.5 Score=39.82 Aligned_cols=15 Identities=20% Similarity=0.230 Sum_probs=12.9
Q ss_pred CeEEEEeCCCceeec
Q 000938 904 KLCLVLDLDHTLLNS 918 (1218)
Q Consensus 904 KLTLVLDLDETLIHS 918 (1218)
.+.+++|||+||++.
T Consensus 14 ~k~i~~D~DGtL~~~ 28 (284)
T 2hx1_A 14 YKCIFFDAFGVLKTY 28 (284)
T ss_dssp CSEEEECSBTTTEET
T ss_pred CCEEEEcCcCCcCcC
Confidence 457999999999975
No 171
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=65.08 E-value=2.7 Score=40.10 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=36.9
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeee
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAG 1003 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~ 1003 (1218)
..+.|++.++|+.+.+. +.++|+|.+...++..+++.+.-.. +|..
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~-~~~~ 121 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY-AFAN 121 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe-EEEe
Confidence 45679999999999764 8999999999999998888876543 4443
No 172
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=64.51 E-value=2.8 Score=42.79 Aligned_cols=48 Identities=8% Similarity=-0.037 Sum_probs=26.3
Q ss_pred CCCchHHHHHHHhCCEEecccCCCccEEEeCCCC-CHHHHHHHHcCCcEEcHHHHHH
Q 000938 1146 PHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLG-TDKVNWALSTGRFVVHPGWVEA 1201 (1218)
Q Consensus 1146 Per~~LwkLAeqLGAtVssdVd~kVTHLVAss~g-TeKVk~Alk~GIkIVSPdWLed 1201 (1218)
|....+..+++.+|.. + ..+|+-..+ ..=+..|...|+.+|...|-..
T Consensus 184 p~~~~~~~~~~~lgi~------~--~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~ 232 (266)
T 3pdw_A 184 PESIIMEQAMRVLGTD------V--SETLMVGDNYATDIMAGINAGMDTLLVHTGVT 232 (266)
T ss_dssp TSSHHHHHHHHHHTCC------G--GGEEEEESCTTTHHHHHHHHTCEEEEECCC--
T ss_pred CCHHHHHHHHHHcCCC------h--hhEEEECCCcHHHHHHHHHCCCeEEEECCCCC
Confidence 4445677778888742 2 223333333 2336667777887776666443
No 173
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=63.47 E-value=7.3 Score=41.57 Aligned_cols=55 Identities=18% Similarity=0.128 Sum_probs=35.9
Q ss_pred CeEEEEeCCCceeec-ccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcC
Q 000938 904 KLCLVLDLDHTLLNS-AKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 981 (1218)
Q Consensus 904 KLTLVLDLDETLIHS-s~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTA 981 (1218)
.+.+++||||||+.. .. .+ -|...+.|+++.+ ...++|.|.
T Consensus 27 ikli~~DlDGTLl~~~~~--~i-----------------------------------s~~~~~al~~l~~~Gi~v~iaTG 69 (301)
T 2b30_A 27 IKLLLIDFDGTLFVDKDI--KV-----------------------------------PSENIDAIKEAIEKGYMVSICTG 69 (301)
T ss_dssp CCEEEEETBTTTBCCTTT--CS-----------------------------------CHHHHHHHHHHHHHTCEEEEECS
T ss_pred ccEEEEECCCCCcCCCCC--cc-----------------------------------CHHHHHHHHHHHHCCCEEEEEcC
Confidence 457999999999976 32 11 1334556666553 477777777
Q ss_pred CcHHHHHHHH--HHHc
Q 000938 982 GNKLYATEMA--KVLD 995 (1218)
Q Consensus 982 GtreYAd~VL--diLD 995 (1218)
-....+..++ +.|.
T Consensus 70 R~~~~~~~~~~~~~l~ 85 (301)
T 2b30_A 70 RSKVGILSAFGEENLK 85 (301)
T ss_dssp SCHHHHHHHHCHHHHH
T ss_pred CCHHHHHHHhhHHhhc
Confidence 7776667776 6543
No 174
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=63.19 E-value=3.4 Score=44.39 Aligned_cols=88 Identities=10% Similarity=0.144 Sum_probs=56.6
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCC------CCCCCCCCCCCccccccc
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDD------GDPFDGDERVPKSKDLEG 1029 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc------~~~~dG~Er~~yiKDLsr 1029 (1218)
+.++|++.++|+.+.+. |.++|.|++...++..+++.+.-.. +|...+-..+.. +....+......++-+..
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~ 255 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY-AQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ 255 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe-EEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence 56899999999999865 9999999999999999999988754 666543211100 000000000001122222
Q ss_pred ccCCC-CcEEEEeCCCC
Q 000938 1030 VLGME-SAVVIIDDSVR 1045 (1218)
Q Consensus 1030 VLGRD-srVVIVDDspd 1045 (1218)
.+|.+ ..++.|.|+..
T Consensus 256 ~lgi~~~~~v~vGDs~n 272 (335)
T 3n28_A 256 QYDVEIHNTVAVGDGAN 272 (335)
T ss_dssp HHTCCGGGEEEEECSGG
T ss_pred HcCCChhhEEEEeCCHH
Confidence 35666 78999999974
No 175
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=62.48 E-value=6.7 Score=37.65 Aligned_cols=82 Identities=13% Similarity=0.193 Sum_probs=51.7
Q ss_pred EEecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+..+|++.++|+.+.+ .+.++|+|++ .++..+++.++-.. +|.. ++..++.. ..++. + ..++-+...+|.+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~Kp~-~-~~~~~~~~~lgi~~ 162 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTG-YFDA-IADPAEVA-ASKPA-P-DIFIAAAHAVGVAP 162 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGG-GCSE-ECCTTTSS-SCTTS-S-HHHHHHHHHTTCCG
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHH-Hcce-EeccccCC-CCCCC-h-HHHHHHHHHcCCCh
Confidence 3567999999999986 4999999998 56777777775433 5554 44333221 11110 0 1122233345766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.++.|+|+..
T Consensus 163 ~~~i~iGD~~n 173 (221)
T 2wf7_A 163 SESIGLEDSQA 173 (221)
T ss_dssp GGEEEEESSHH
T ss_pred hHeEEEeCCHH
Confidence 88999999964
No 176
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=61.48 E-value=3.7 Score=39.78 Aligned_cols=84 Identities=20% Similarity=0.204 Sum_probs=54.6
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCC-CCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDP-FDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~-~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.. .++|.|++...++..+++.+.-.. +|.+.+++.++.... +.. ....++-+...+|.+
T Consensus 86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~kp--k~~~~~~~~~~l~~~~ 160 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKP-YFAPHIYSAKDLGADRVKP--KPDIFLHGAAQFGVSP 160 (229)
T ss_dssp CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGG-GTTTCEEEHHHHCTTCCTT--SSHHHHHHHHHHTCCG
T ss_pred CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChHH-hccceEEeccccccCCCCc--CHHHHHHHHHHcCCCh
Confidence 4678999999999875 899999999999999999876543 552235543321100 010 001223333345766
Q ss_pred CcEEEEeCCCC
Q 000938 1035 SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 srVVIVDDspd 1045 (1218)
+.++.|+|+..
T Consensus 161 ~~~i~iGD~~~ 171 (229)
T 2fdr_A 161 DRVVVVEDSVH 171 (229)
T ss_dssp GGEEEEESSHH
T ss_pred hHeEEEcCCHH
Confidence 88999999974
No 177
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=59.93 E-value=3.6 Score=41.00 Aligned_cols=84 Identities=12% Similarity=0.044 Sum_probs=51.4
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHH-HHcCCCceeeeeeeecC--CCCCCCCCCCCCCcccccccccC
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAK-VLDPKGVLFAGRVISRG--DDGDPFDGDERVPKSKDLEGVLG 1032 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLd-iLDP~g~LF~~RIySRD--dc~~~~dG~Er~~yiKDLsrVLG 1032 (1218)
+...|++.++|+.+.+. |.++|+|++.+.++...+. .+.-. .+|.. ++..+ +.. ..+.. + ..++-+...+|
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~-~~f~~-~~~~~~~~~~-~~Kp~-~-~~~~~~~~~lg 185 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFF-SLFSH-IVLGDDPEVQ-HGKPD-P-DIFLACAKRFS 185 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHH-TTSSC-EECTTCTTCC-SCTTS-T-HHHHHHHHTSS
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHH-hheee-EEecchhhcc-CCCCC-h-HHHHHHHHHcC
Confidence 56899999999999876 9999999999888776553 22211 24553 44333 221 11110 0 11222223456
Q ss_pred CC---CcEEEEeCCCC
Q 000938 1033 ME---SAVVIIDDSVR 1045 (1218)
Q Consensus 1033 RD---srVVIVDDspd 1045 (1218)
.+ +.+|.|+|+..
T Consensus 186 i~~~~~~~i~iGD~~~ 201 (250)
T 3l5k_A 186 PPPAMEKCLVFEDAPN 201 (250)
T ss_dssp SCCCGGGEEEEESSHH
T ss_pred CCCCcceEEEEeCCHH
Confidence 43 78999999974
No 178
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=59.15 E-value=7.4 Score=39.55 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
...+++|||+||+.+.
T Consensus 5 ~k~v~fDlDGTL~~~~ 20 (264)
T 1yv9_A 5 YQGYLIDLDGTIYLGK 20 (264)
T ss_dssp CCEEEECCBTTTEETT
T ss_pred CCEEEEeCCCeEEeCC
Confidence 4579999999999864
No 179
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=59.12 E-value=8.2 Score=40.25 Aligned_cols=17 Identities=29% Similarity=0.538 Sum_probs=14.2
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
..+.+++||||||+++.
T Consensus 3 ~~kli~~DlDGTLl~~~ 19 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTPPR 19 (246)
T ss_dssp CSEEEEECSBTTTBSTT
T ss_pred CceEEEEeCcCCcCCCC
Confidence 35789999999999774
No 180
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=58.74 E-value=17 Score=36.16 Aligned_cols=16 Identities=25% Similarity=0.360 Sum_probs=13.5
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
-+.+++||||||+.+.
T Consensus 12 ~k~i~fDlDGTLl~s~ 27 (271)
T 2x4d_A 12 VRGVLLDISGVLYDSG 27 (271)
T ss_dssp CCEEEECCBTTTEECC
T ss_pred CCEEEEeCCCeEEecC
Confidence 3578999999999974
No 181
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=58.59 E-value=2.3 Score=43.59 Aligned_cols=15 Identities=33% Similarity=0.483 Sum_probs=12.9
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+.+.
T Consensus 3 kli~~DlDGTLl~~~ 17 (261)
T 2rbk_A 3 KALFFDIDGTLVSFE 17 (261)
T ss_dssp CEEEECSBTTTBCTT
T ss_pred cEEEEeCCCCCcCCC
Confidence 468999999999874
No 182
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=58.14 E-value=4.5 Score=41.89 Aligned_cols=15 Identities=47% Similarity=0.640 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+++.
T Consensus 4 kli~~DlDGTLl~~~ 18 (271)
T 1rlm_A 4 KVIVTDMDGTFLNDA 18 (271)
T ss_dssp CEEEECCCCCCSCTT
T ss_pred cEEEEeCCCCCCCCC
Confidence 478999999999864
No 183
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=57.46 E-value=3.5 Score=38.97 Aligned_cols=82 Identities=16% Similarity=0.165 Sum_probs=51.7
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCC--CCcccccccccCC
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDER--VPKSKDLEGVLGM 1033 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er--~~yiKDLsrVLGR 1033 (1218)
+..+|++.++|+.+.+. |.++|+|++...++..+ +.+.-.. +|. .+...+.. +.+... ..+..-|.++ .
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~-~~~-~~~~~~~~---~~~~~~~~~~k~~~l~~l--~ 149 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEF-MAN-RAIFEDGK---FQGIRLRFRDKGEFLKRF--R 149 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEE-EEE-EEEEETTE---EEEEECCSSCHHHHHGGG--T
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchh-hee-eEEeeCCc---eECCcCCccCHHHHHHhc--C
Confidence 47899999999999876 99999999999999888 7776443 333 23322211 110000 0122333333 2
Q ss_pred CCcEEEEeCCCCc
Q 000938 1034 ESAVVIIDDSVRV 1046 (1218)
Q Consensus 1034 DsrVVIVDDspdV 1046 (1218)
.+.++.|.|+..-
T Consensus 150 ~~~~i~iGD~~~D 162 (201)
T 4ap9_A 150 DGFILAMGDGYAD 162 (201)
T ss_dssp TSCEEEEECTTCC
T ss_pred cCcEEEEeCCHHH
Confidence 3789999998743
No 184
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=57.24 E-value=6.6 Score=39.21 Aligned_cols=101 Identities=17% Similarity=0.126 Sum_probs=58.7
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcC
Q 000938 903 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 981 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTA 981 (1218)
+-+.||+|+|+||+..... +++... .. -.+.+|.+. .|+.|.+ .+.+.|-|.
T Consensus 8 ~ikliv~D~DGtL~d~~~~--~~~~g~--------------~~---------~~f~~~D~~--~L~~Lk~~Gi~~~I~Tg 60 (168)
T 3ewi_A 8 EIKLLVCNIDGCLTNGHIY--VSGDQK--------------EI---------ISYDVKDAI--GISLLKKSGIEVRLISE 60 (168)
T ss_dssp CCCEEEEECCCCCSCSCCB--CCSSCC--------------CE---------EEEEHHHHH--HHHHHHHTTCEEEEECS
T ss_pred cCcEEEEeCccceECCcEE--EcCCCC--------------EE---------EEEecCcHH--HHHHHHHCCCEEEEEeC
Confidence 4468999999999976421 222100 00 112344443 5777764 599999998
Q ss_pred CcHHHHHHHHH--HHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-CcEEEEeCCCCcc
Q 000938 982 GNKLYATEMAK--VLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVW 1047 (1218)
Q Consensus 982 GtreYAd~VLd--iLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-srVVIVDDspdVW 1047 (1218)
. ..+..+++ .|.-. +|.. +.. ++ ..++.+...+|.+ +.++.|-|+..-.
T Consensus 61 ~--~~~~~~l~~l~lgi~--~~~g-------~~~--K~----~~l~~~~~~~gi~~~~~~~vGD~~nDi 112 (168)
T 3ewi_A 61 R--ACSKQTLSALKLDCK--TEVS-------VSD--KL----ATVDEWRKEMGLCWKEVAYLGNEVSDE 112 (168)
T ss_dssp S--CCCHHHHHTTCCCCC--EECS-------CSC--HH----HHHHHHHHHTTCCGGGEEEECCSGGGH
T ss_pred c--HHHHHHHHHhCCCcE--EEEC-------CCC--hH----HHHHHHHHHcCcChHHEEEEeCCHhHH
Confidence 8 78888888 44322 2211 100 11 2234444455666 7899999986433
No 185
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=57.16 E-value=9 Score=36.48 Aligned_cols=17 Identities=35% Similarity=0.649 Sum_probs=14.2
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
+.+.+++||||||+.+.
T Consensus 4 ~~k~i~fDlDGTL~d~~ 20 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNE 20 (211)
T ss_dssp CCEEEEEECCCCCBSSC
T ss_pred CCcEEEEeCCCCCCCcc
Confidence 34679999999999884
No 186
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=56.34 E-value=15 Score=38.75 Aligned_cols=15 Identities=27% Similarity=0.348 Sum_probs=12.5
Q ss_pred CeEEEEeCCCceeec
Q 000938 904 KLCLVLDLDHTLLNS 918 (1218)
Q Consensus 904 KLTLVLDLDETLIHS 918 (1218)
.+.+++|||+||+..
T Consensus 21 ~k~i~~D~DGTL~~~ 35 (306)
T 2oyc_A 21 AQGVLFDCDGVLWNG 35 (306)
T ss_dssp CSEEEECSBTTTEET
T ss_pred CCEEEECCCCcEecC
Confidence 347899999999965
No 187
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=54.94 E-value=8 Score=39.36 Aligned_cols=15 Identities=47% Similarity=0.534 Sum_probs=13.0
Q ss_pred CeEEEEeCCCceeec
Q 000938 904 KLCLVLDLDHTLLNS 918 (1218)
Q Consensus 904 KLTLVLDLDETLIHS 918 (1218)
.+.+++||||||+.+
T Consensus 12 iKli~~DlDGTLl~~ 26 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSF 26 (268)
T ss_dssp CCEEEECSBTTTBCT
T ss_pred eEEEEEeCCCCCcCC
Confidence 467999999999974
No 188
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=54.19 E-value=11 Score=37.80 Aligned_cols=85 Identities=12% Similarity=0.000 Sum_probs=54.5
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1034 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD- 1034 (1218)
+...|++.++|+.+.+. +.++|.|++...++..+++.+.-.. +|...+++.++... ... ....++-+...+|.+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~kp--~~~~~~~~~~~lgi~~ 177 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG-YKPDFLVTPDDVPA-GRP--YPWMCYKNAMELGVYP 177 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCCSCCBCGGGSSC-CTT--SSHHHHHHHHHHTCCS
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcc-cChHheecCCccCC-CCC--CHHHHHHHHHHhCCCC
Confidence 45689999999999764 9999999999999999998875443 33233444332211 010 001122233345653
Q ss_pred -CcEEEEeCCCC
Q 000938 1035 -SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 -srVVIVDDspd 1045 (1218)
+.++.|.|+..
T Consensus 178 ~~~~i~iGD~~n 189 (267)
T 1swv_A 178 MNHMIKVGDTVS 189 (267)
T ss_dssp GGGEEEEESSHH
T ss_pred CcCEEEEeCCHH
Confidence 68999999974
No 189
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=53.76 E-value=5.2 Score=42.12 Aligned_cols=16 Identities=38% Similarity=0.474 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+.+.
T Consensus 37 iKli~fDlDGTLld~~ 52 (304)
T 3l7y_A 37 VKVIATDMDGTFLNSK 52 (304)
T ss_dssp CSEEEECCCCCCSCTT
T ss_pred eEEEEEeCCCCCCCCC
Confidence 4679999999999874
No 190
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=53.52 E-value=4.3 Score=40.03 Aligned_cols=39 Identities=10% Similarity=0.054 Sum_probs=33.2
Q ss_pred EEecCCHHHHHHHHhc--cceEEEEcCCcHHHHHHHHHHHc
Q 000938 957 TKLRPGIWTFLERASK--LFEMHLYTMGNKLYATEMAKVLD 995 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk--~YEIVIFTAGtreYAd~VLdiLD 995 (1218)
+.+.||+.++|+.|.+ .|.+.|.|++.+.++..+++.+.
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~ 114 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYA 114 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhc
Confidence 5688999999999987 59999999999988877776543
No 191
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=53.11 E-value=8 Score=39.26 Aligned_cols=81 Identities=16% Similarity=0.159 Sum_probs=53.8
Q ss_pred EecCCHHHHHHHHh-ccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 958 KLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 958 KlRPGLdEFLeeLS-k~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
...||+.++|+.+. ..+-+.|.|++. .+..+++.+.-.. +|.. +++.++.. ..+. ++..|.+=++ .+|.+ +
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~-~fd~-i~~~~~~~-~~KP-~p~~~~~a~~-~lg~~p~ 167 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELRE-FFTF-CADASQLK-NSKP-DPEIFLAACA-GLGVPPQ 167 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGG-GCSE-ECCGGGCS-SCTT-STHHHHHHHH-HHTSCGG
T ss_pred cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhcc-cccc-cccccccc-CCCC-cHHHHHHHHH-HcCCChH
Confidence 46899999999996 568899998865 4677888877654 6654 55444322 1121 1113444454 46776 8
Q ss_pred cEEEEeCCCC
Q 000938 1036 AVVIIDDSVR 1045 (1218)
Q Consensus 1036 rVVIVDDspd 1045 (1218)
.+|+|+|++.
T Consensus 168 e~l~VgDs~~ 177 (243)
T 4g9b_A 168 ACIGIEDAQA 177 (243)
T ss_dssp GEEEEESSHH
T ss_pred HEEEEcCCHH
Confidence 9999999964
No 192
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=52.77 E-value=4.9 Score=38.48 Aligned_cols=16 Identities=31% Similarity=0.426 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+++.
T Consensus 6 ~k~v~fDlDGTL~d~~ 21 (225)
T 3d6j_A 6 YTVYLFDFDYTLADSS 21 (225)
T ss_dssp CSEEEECCBTTTEECH
T ss_pred CCEEEEeCCCCCCCCH
Confidence 4579999999999875
No 193
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=51.93 E-value=5.5 Score=43.38 Aligned_cols=82 Identities=18% Similarity=0.079 Sum_probs=53.2
Q ss_pred EEecCCHHHHHHHHhcc-ceEEEEcCC------cHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCccccccc
Q 000938 957 TKLRPGIWTFLERASKL-FEMHLYTMG------NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEG 1029 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~-YEIVIFTAG------treYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsr 1029 (1218)
+.+.|++.++|+.|.+. |.++|.|++ .+......+.-|+. +|.. +++.++... .+.+ +..|.+=+.
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~---~fd~-i~~~~~~~~-~KP~-p~~~~~~~~- 171 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM---HFDF-LIESCQVGM-VKPE-PQIYKFLLD- 171 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT---TSSE-EEEHHHHTC-CTTC-HHHHHHHHH-
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhh---heeE-EEeccccCC-CCCC-HHHHHHHHH-
Confidence 57889999999999876 999999999 66666655544542 5665 454333221 1111 112333344
Q ss_pred ccCCC-CcEEEEeCCCC
Q 000938 1030 VLGME-SAVVIIDDSVR 1045 (1218)
Q Consensus 1030 VLGRD-srVVIVDDspd 1045 (1218)
.+|.+ +.+++|+|+..
T Consensus 172 ~lg~~p~~~~~v~D~~~ 188 (555)
T 3i28_A 172 TLKASPSEVVFLDDIGA 188 (555)
T ss_dssp HHTCCGGGEEEEESCHH
T ss_pred HcCCChhHEEEECCcHH
Confidence 45766 88999999964
No 194
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=51.56 E-value=6.9 Score=40.22 Aligned_cols=36 Identities=8% Similarity=0.110 Sum_probs=22.9
Q ss_pred ecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHH
Q 000938 959 LRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVL 994 (1218)
Q Consensus 959 lRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiL 994 (1218)
+-|...+.|+++.+.-.++|-|.-....+..+++.|
T Consensus 24 i~~~~~~al~~l~~~g~v~iaTGR~~~~~~~~~~~l 59 (239)
T 1u02_A 24 ADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLD 59 (239)
T ss_dssp CCHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCSS
T ss_pred CCHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHhccc
Confidence 345677788887643377777776666666655443
No 195
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=49.65 E-value=5.9 Score=38.49 Aligned_cols=16 Identities=31% Similarity=0.555 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
...+++||||||+.+.
T Consensus 4 ~k~iifDlDGTL~d~~ 19 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKVE 19 (234)
T ss_dssp CEEEEECCBTTTEEEC
T ss_pred ceEEEEcCCCCcccCc
Confidence 4579999999999985
No 196
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=49.62 E-value=5.6 Score=37.32 Aligned_cols=15 Identities=47% Similarity=0.629 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++|||+||+.+.
T Consensus 5 k~i~fDlDGTL~~~~ 19 (207)
T 2go7_A 5 TAFIWDLDGTLLDSY 19 (207)
T ss_dssp CEEEECTBTTTEECH
T ss_pred cEEEEeCCCcccccH
Confidence 578999999999875
No 197
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=49.60 E-value=5.9 Score=38.58 Aligned_cols=15 Identities=20% Similarity=0.412 Sum_probs=13.4
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+++.
T Consensus 4 k~i~fDlDGTLl~~~ 18 (250)
T 2c4n_A 4 KNVICDIDGVLMHDN 18 (250)
T ss_dssp CEEEEECBTTTEETT
T ss_pred cEEEEcCcceEEeCC
Confidence 579999999999985
No 198
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=49.08 E-value=6.8 Score=39.89 Aligned_cols=81 Identities=15% Similarity=0.116 Sum_probs=51.7
Q ss_pred EecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 958 KLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 958 KlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
.+.||+.++|+.+.+. +-+.+-|++ .++..+++.+.-.. +|.. +++.++... .+. ++..+.+=+. .+|.. +
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~~-~Fd~-i~~~~~~~~-~KP-~p~~~~~a~~-~lg~~p~ 188 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGISD-KFDF-IADAGKCKN-NKP-HPEIFLMSAK-GLNVNPQ 188 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCGG-GCSE-ECCGGGCCS-CTT-SSHHHHHHHH-HHTCCGG
T ss_pred ccchhHHHHHHHHHhccccccccccc--chhhhHhhhccccc-ccce-eecccccCC-CCC-cHHHHHHHHH-HhCCChH
Confidence 4679999999999754 556665443 56788888887654 7765 555443321 121 1112334444 35766 8
Q ss_pred cEEEEeCCCC
Q 000938 1036 AVVIIDDSVR 1045 (1218)
Q Consensus 1036 rVVIVDDspd 1045 (1218)
.+|+|+|++.
T Consensus 189 e~l~VGDs~~ 198 (250)
T 4gib_A 189 NCIGIEDASA 198 (250)
T ss_dssp GEEEEESSHH
T ss_pred HeEEECCCHH
Confidence 9999999974
No 199
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=48.79 E-value=5.7 Score=37.59 Aligned_cols=16 Identities=19% Similarity=0.509 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++|||+||+.+.
T Consensus 5 ~k~i~fDlDGTL~~~~ 20 (214)
T 3e58_A 5 VEAIIFDMDGVLFDTE 20 (214)
T ss_dssp CCEEEEESBTTTBCCH
T ss_pred ccEEEEcCCCCccccH
Confidence 4689999999999874
No 200
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=48.12 E-value=5.4 Score=37.69 Aligned_cols=48 Identities=6% Similarity=-0.071 Sum_probs=30.8
Q ss_pred CCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHHHHHH
Q 000938 1145 NPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEAS 1202 (1218)
Q Consensus 1145 nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdWLedC 1202 (1218)
.|....+..+++.+|.. .+++-..+..=+..|...|+.+|...|-...
T Consensus 137 kp~~~~~~~~~~~~~~~----------~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~ 184 (190)
T 2fi1_A 137 KPNPESMLYLREKYQIS----------SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNL 184 (190)
T ss_dssp TTSCHHHHHHHHHTTCS----------SEEEEESSHHHHHHHHHTTCEEEECSCHHHH
T ss_pred CCCHHHHHHHHHHcCCC----------eEEEEcCCHHHHHHHHHcCCeEEEECCCCCh
Confidence 44556677888888843 2344433345566778889888877765544
No 201
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=47.54 E-value=4.1 Score=39.64 Aligned_cols=78 Identities=23% Similarity=0.170 Sum_probs=47.9
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+...|++.++|+.+.+.|.++|+|++... ++.+.-. .+|.. ++..+++.. .+.. + ..++-+...+|.+ +
T Consensus 104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~-~~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~~ 173 (230)
T 3vay_A 104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLA-DYFAF-ALCAEDLGI-GKPD-P-APFLEALRRAKVDAS 173 (230)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTG-GGCSE-EEEHHHHTC-CTTS-H-HHHHHHHHHHTCCGG
T ss_pred CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcH-HHeee-eEEccccCC-CCcC-H-HHHHHHHHHhCCCch
Confidence 56889999999999988999999999865 3333222 24554 444332211 1100 0 0122233345766 8
Q ss_pred cEEEEeCCC
Q 000938 1036 AVVIIDDSV 1044 (1218)
Q Consensus 1036 rVVIVDDsp 1044 (1218)
.+++|+|+.
T Consensus 174 ~~~~vGD~~ 182 (230)
T 3vay_A 174 AAVHVGDHP 182 (230)
T ss_dssp GEEEEESCT
T ss_pred heEEEeCCh
Confidence 999999996
No 202
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=47.43 E-value=5.9 Score=40.15 Aligned_cols=17 Identities=35% Similarity=0.411 Sum_probs=14.2
Q ss_pred CeEEEEeCCCceeeccc
Q 000938 904 KLCLVLDLDHTLLNSAK 920 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs~ 920 (1218)
.+.+++||||||+.+..
T Consensus 5 ~kli~fDlDGTLl~~~~ 21 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEVY 21 (274)
T ss_dssp CCEEEECSBTTTBBTTT
T ss_pred ceEEEEECCCCCCCCCC
Confidence 35799999999998853
No 203
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=53.08 E-value=4 Score=42.76 Aligned_cols=74 Identities=19% Similarity=0.303 Sum_probs=52.2
Q ss_pred EEEecCCHHHHHHHHhcc-ceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC
Q 000938 956 WTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1034 (1218)
Q Consensus 956 YVKlRPGLdEFLeeLSk~-YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD 1034 (1218)
...+||++.++|+.|.+. |.++|.|+..+.++..+++.+.-.. +|.. ++.. .+.+=++ .++..
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~~-~~p~-------------~k~~~~~-~l~~~ 197 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-YYSN-LSPE-------------DKVRIIE-KLKQN 197 (263)
Confidence 356899999999999865 9999999999999999999886543 4442 3211 1112222 23444
Q ss_pred -CcEEEEeCCCC
Q 000938 1035 -SAVVIIDDSVR 1045 (1218)
Q Consensus 1035 -srVVIVDDspd 1045 (1218)
..+++|.|+..
T Consensus 198 ~~~~~~VGD~~~ 209 (263)
T 2yj3_A 198 GNKVLMIGDGVN 209 (263)
Confidence 67999999863
No 204
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=47.00 E-value=7.2 Score=40.49 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=14.6
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
..+.+++||||||+.+.
T Consensus 21 ~~kliifDlDGTLlds~ 37 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHT 37 (289)
T ss_dssp CSEEEEEETBTTTBCSS
T ss_pred CCeEEEEECCCCCcCCC
Confidence 46789999999999874
No 205
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=45.98 E-value=6.7 Score=37.89 Aligned_cols=15 Identities=47% Similarity=0.629 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++|||+||+.+.
T Consensus 5 k~iifDlDGTL~d~~ 19 (209)
T 2hdo_A 5 QALMFDIDGTLTNSQ 19 (209)
T ss_dssp SEEEECSBTTTEECH
T ss_pred cEEEEcCCCCCcCCH
Confidence 579999999999875
No 206
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=45.86 E-value=13 Score=37.13 Aligned_cols=77 Identities=14% Similarity=0.147 Sum_probs=51.4
Q ss_pred EEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHHcCCCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC-C
Q 000938 957 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1035 (1218)
Q Consensus 957 VKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiLDP~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD-s 1035 (1218)
+.+.||+.++|+.+.+...++|.|++.+.|+..+++.+.-.. +|...+... . .+. .+++-+.+ |.+ +
T Consensus 95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~-~f~~~~~~~--~---~K~----~~~~~~~~--~~~~~ 162 (231)
T 2p11_A 95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWD-EVEGRVLIY--I---HKE----LMLDQVME--CYPAR 162 (231)
T ss_dssp GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHH-HTTTCEEEE--S---SGG----GCHHHHHH--HSCCS
T ss_pred CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHH-hcCeeEEec--C---ChH----HHHHHHHh--cCCCc
Confidence 467899999999998766899999999999999998765332 443322110 0 000 12222221 334 7
Q ss_pred cEEEEeCCCC
Q 000938 1036 AVVIIDDSVR 1045 (1218)
Q Consensus 1036 rVVIVDDspd 1045 (1218)
.+|+|+|++.
T Consensus 163 ~~~~vgDs~~ 172 (231)
T 2p11_A 163 HYVMVDDKLR 172 (231)
T ss_dssp EEEEECSCHH
T ss_pred eEEEEcCccc
Confidence 8999999975
No 207
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=45.74 E-value=6.2 Score=37.77 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++|||+||+.+.
T Consensus 9 ~k~i~fDlDGTL~~~~ 24 (226)
T 1te2_A 9 ILAAIFDMDGLLIDSE 24 (226)
T ss_dssp CCEEEECCBTTTBCCH
T ss_pred CCEEEECCCCCcCcCH
Confidence 4589999999999774
No 208
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=45.68 E-value=7.1 Score=38.97 Aligned_cols=17 Identities=29% Similarity=0.630 Sum_probs=14.5
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
..+.+++|||+||+.+.
T Consensus 10 ~~k~viFDlDGTL~ds~ 26 (231)
T 2p11_A 10 HDIVFLFDCDNTLLDND 26 (231)
T ss_dssp CSEEEEECCBTTTBCHH
T ss_pred CCeEEEEcCCCCCEecH
Confidence 45689999999999885
No 209
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=45.63 E-value=7.5 Score=38.20 Aligned_cols=46 Identities=11% Similarity=0.015 Sum_probs=26.3
Q ss_pred CCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHH
Q 000938 1145 NPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGW 1198 (1218)
Q Consensus 1145 nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdW 1198 (1218)
.|+...+...++.+|.. +. .+|+-.....=+..|++.|++.|...|
T Consensus 137 Kp~p~~~~~~~~~lg~~------p~--~~~~vgDs~~Di~~a~~aG~~~i~v~~ 182 (210)
T 2ah5_A 137 PHKADVIHQALQTHQLA------PE--QAIIIGDTKFDMLGARETGIQKLAITW 182 (210)
T ss_dssp CSHHHHHHHHHHHTTCC------GG--GEEEEESSHHHHHHHHHHTCEEEEESS
T ss_pred CCChHHHHHHHHHcCCC------cc--cEEEECCCHHHHHHHHHCCCcEEEEcC
Confidence 44445566777888743 22 223333233456677788887766555
No 210
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=45.39 E-value=6.8 Score=37.95 Aligned_cols=15 Identities=27% Similarity=0.425 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+++.
T Consensus 5 k~i~fDlDGTL~d~~ 19 (229)
T 2fdr_A 5 DLIIFDCDGVLVDSE 19 (229)
T ss_dssp SEEEECSBTTTBCCH
T ss_pred cEEEEcCCCCcCccH
Confidence 578999999999875
No 211
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=45.21 E-value=5.7 Score=38.16 Aligned_cols=15 Identities=27% Similarity=0.525 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+.+.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (221)
T 2wf7_A 3 KAVLFDLDGVITDTA 17 (221)
T ss_dssp CEEEECCBTTTBTHH
T ss_pred cEEEECCCCcccCCh
Confidence 478999999999875
No 212
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=45.17 E-value=7.2 Score=37.63 Aligned_cols=14 Identities=29% Similarity=0.470 Sum_probs=12.6
Q ss_pred EEEEeCCCceeecc
Q 000938 906 CLVLDLDHTLLNSA 919 (1218)
Q Consensus 906 TLVLDLDETLIHSs 919 (1218)
.+++|||+||+.+.
T Consensus 3 ~iiFDlDGTL~d~~ 16 (201)
T 2w43_A 3 ILAFDIFGTVLDTS 16 (201)
T ss_dssp EEEECCBTTTEEGG
T ss_pred EEEEeCCCceecch
Confidence 68999999999985
No 213
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=45.16 E-value=6.4 Score=37.77 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+.+.
T Consensus 8 ik~i~fDlDGTL~~~~ 23 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNE 23 (234)
T ss_dssp CCEEEECCBTTTBCCH
T ss_pred ccEEEEeCCCCCccCc
Confidence 3689999999999875
No 214
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=44.86 E-value=6.6 Score=38.07 Aligned_cols=16 Identities=44% Similarity=0.501 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+.+.
T Consensus 4 ~k~i~fDlDGTL~d~~ 19 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDSA 19 (226)
T ss_dssp CCEEEECSBTTTBCCH
T ss_pred CCEEEEeCCCccccCH
Confidence 3579999999999875
No 215
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=44.38 E-value=7.2 Score=37.61 Aligned_cols=16 Identities=25% Similarity=0.316 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+.+.
T Consensus 5 ~k~iiFDlDGTL~d~~ 20 (211)
T 2i6x_A 5 IRNIVFDLGGVLIHLN 20 (211)
T ss_dssp CSEEEECSBTTTEEEC
T ss_pred ceEEEEeCCCeeEecc
Confidence 3579999999999875
No 216
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=44.37 E-value=8.1 Score=36.79 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=13.3
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
-+.+++||||||+.+.
T Consensus 4 ik~i~fDlDGTL~d~~ 19 (219)
T 3kd3_A 4 MKNIIFDFDSTLIKKE 19 (219)
T ss_dssp CEEEEECCCCCCBSSC
T ss_pred ceEEEEeCCCCCcCcc
Confidence 3678999999999764
No 217
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=44.11 E-value=8.3 Score=37.76 Aligned_cols=18 Identities=39% Similarity=0.525 Sum_probs=15.3
Q ss_pred CCCeEEEEeCCCceeecc
Q 000938 902 ARKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 902 ~kKLTLVLDLDETLIHSs 919 (1218)
.+-+.+++||||||+.+.
T Consensus 17 ~~ik~i~fDlDGTL~d~~ 34 (237)
T 4ex6_A 17 AADRGVILDLDGTLADTP 34 (237)
T ss_dssp CCCEEEEECSBTTTBCCH
T ss_pred ccCCEEEEcCCCCCcCCH
Confidence 466789999999999874
No 218
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=43.88 E-value=8.4 Score=37.30 Aligned_cols=16 Identities=38% Similarity=0.607 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
...+++|||+||+.+.
T Consensus 6 ~k~i~fDlDGTL~~~~ 21 (233)
T 3s6j_A 6 QTSFIFDLDGTLTDSV 21 (233)
T ss_dssp CCEEEECCBTTTEECH
T ss_pred CcEEEEcCCCccccCh
Confidence 4689999999999874
No 219
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=43.83 E-value=7.1 Score=37.94 Aligned_cols=16 Identities=31% Similarity=0.482 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+++.
T Consensus 7 ~k~i~fDlDGTL~d~~ 22 (238)
T 3ed5_A 7 YRTLLFDVDDTILDFQ 22 (238)
T ss_dssp CCEEEECCBTTTBCHH
T ss_pred CCEEEEcCcCcCcCCc
Confidence 4689999999999875
No 220
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=43.71 E-value=7.7 Score=37.97 Aligned_cols=15 Identities=27% Similarity=0.317 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++|||+||+.+.
T Consensus 5 k~viFDlDGTL~d~~ 19 (232)
T 1zrn_A 5 KGIAFDLYGTLFDVH 19 (232)
T ss_dssp CEEEECSBTTTEETH
T ss_pred eEEEEecCCcccCch
Confidence 579999999999874
No 221
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=43.58 E-value=7 Score=39.10 Aligned_cols=16 Identities=31% Similarity=0.200 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+.+.
T Consensus 13 ~k~iifDlDGTL~d~~ 28 (251)
T 2pke_A 13 IQLVGFDGDDTLWKSE 28 (251)
T ss_dssp CCEEEECCBTTTBCCH
T ss_pred eeEEEEeCCCCCccCc
Confidence 3589999999999875
No 222
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=43.43 E-value=6.7 Score=38.33 Aligned_cols=15 Identities=27% Similarity=0.554 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
..+++|||+||+.+.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (233)
T 3nas_A 3 KAVIFDLDGVITDTA 17 (233)
T ss_dssp CEEEECSBTTTBCHH
T ss_pred cEEEECCCCCcCCCH
Confidence 478999999999874
No 223
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=43.37 E-value=6.7 Score=37.93 Aligned_cols=15 Identities=27% Similarity=0.291 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+.+.
T Consensus 5 k~i~fDlDGTL~d~~ 19 (235)
T 2om6_A 5 KLVTFDVWNTLLDLN 19 (235)
T ss_dssp CEEEECCBTTTBCHH
T ss_pred eEEEEeCCCCCCCcc
Confidence 478999999999874
No 224
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=43.08 E-value=7.9 Score=37.09 Aligned_cols=16 Identities=25% Similarity=0.331 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
...+++|||+||+.+.
T Consensus 4 ~k~viFDlDGTL~d~~ 19 (200)
T 3cnh_A 4 IKALFWDIGGVLLTNG 19 (200)
T ss_dssp CCEEEECCBTTTBCCS
T ss_pred ceEEEEeCCCeeECCC
Confidence 3579999999999874
No 225
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=42.74 E-value=9.5 Score=40.00 Aligned_cols=123 Identities=14% Similarity=0.068 Sum_probs=67.8
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhcccccCCCcceeeeeccceEEEEecCCHHHHHHHHhc-cceEEEEcCC
Q 000938 904 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 982 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs~~~evdP~~dEil~~~Ee~D~~~P~~~lF~~~~~~~YVKlRPGLdEFLeeLSk-~YEIVIFTAG 982 (1218)
...+++|+|+||...... .|. .|.. . ....+.||+.++|+.|.+ .+.++|.|+.
T Consensus 159 ~~~i~iD~dgtl~~~~~~---~~~--~~~~----------------~----~~~~~~~g~~e~L~~L~~~g~~~~v~T~k 213 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGR---GPY--DLEK----------------C----DTDVINPMVVELSKMYALMGYQIVVVSGR 213 (301)
T ss_dssp CEEEEEETBTTTBCCSSC---CTT--CGGG----------------G----GGCCBCHHHHHHHHHHHHTTCEEEEEECS
T ss_pred cceEEEeCCCCcccccCC---Cch--hhhh----------------c----cccCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 467889999998765321 121 0100 0 014578999999999986 5999999999
Q ss_pred cHHHHHHHHHHHcC--------CCceeeeeeeecCCCCCCCCCCCCCCcccccccccCCC--CcEEEEeCCCCccccCcC
Q 000938 983 NKLYATEMAKVLDP--------KGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME--SAVVIIDDSVRVWPHNKL 1052 (1218)
Q Consensus 983 treYAd~VLdiLDP--------~g~LF~~RIySRDdc~~~~dG~Er~~yiKDLsrVLGRD--srVVIVDDspdVW~~qpd 1052 (1218)
...|+..+...|+- .|..|.. ++.+++. . .+. .+..+.+=+.+ ++.. ..+++|+|+..-...-..
T Consensus 214 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~-~-~kp-~p~~~~~~~~~-~~~~~~~~~~~vgD~~~di~~a~~ 288 (301)
T 1ltq_A 214 ESGTKEDPTKYYRMTRKWVEDIAGVPLVM-QCQREQG-D-TRK-DDVVKEEIFWK-HIAPHFDVKLAIDDRTQVVEMWRR 288 (301)
T ss_dssp CCCCSSSTTHHHHHHHHHHHHTTCCCCSE-EEECCTT-C-CSC-HHHHHHHHHHH-HTTTTCEEEEEEECCHHHHHHHHH
T ss_pred CcccchhHHHHHHhcccccccccCCCchh-eeeccCC-C-CcH-HHHHHHHHHHH-HhccccceEEEeCCcHHHHHHHHH
Confidence 98887554444433 3434543 5554432 1 110 00011111222 3333 335789999764433233
Q ss_pred Cccc
Q 000938 1053 NLIV 1056 (1218)
Q Consensus 1053 N~I~ 1056 (1218)
+++.
T Consensus 289 aG~~ 292 (301)
T 1ltq_A 289 IGVE 292 (301)
T ss_dssp TTCC
T ss_pred cCCe
Confidence 4544
No 226
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=42.30 E-value=8.5 Score=37.88 Aligned_cols=16 Identities=44% Similarity=0.588 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
...+++|||+||+.+.
T Consensus 4 ~k~viFDlDGTL~d~~ 19 (232)
T 3fvv_A 4 RRLALFDLDHTLLPLD 19 (232)
T ss_dssp CEEEEECCBTTTBSSC
T ss_pred CcEEEEeCCCCCcCCc
Confidence 4688999999999874
No 227
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=41.47 E-value=8.8 Score=37.91 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=14.3
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
..+.+++|||+||+.+.
T Consensus 21 ~ik~i~fDlDGTL~d~~ 37 (254)
T 3umc_A 21 GMRAILFDVFGTLVDWR 37 (254)
T ss_dssp SCCEEEECCBTTTEEHH
T ss_pred CCcEEEEeCCCccEecC
Confidence 35689999999999874
No 228
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=41.44 E-value=7.2 Score=37.69 Aligned_cols=16 Identities=25% Similarity=0.175 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
...+++|||+||+.+.
T Consensus 6 ~k~i~fD~DGTL~d~~ 21 (240)
T 3smv_A 6 FKALTFDCYGTLIDWE 21 (240)
T ss_dssp CSEEEECCBTTTBCHH
T ss_pred ceEEEEeCCCcCcCCc
Confidence 4579999999999875
No 229
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=41.39 E-value=8.1 Score=39.60 Aligned_cols=14 Identities=43% Similarity=0.567 Sum_probs=12.2
Q ss_pred EEEEeCCCceeecc
Q 000938 906 CLVLDLDHTLLNSA 919 (1218)
Q Consensus 906 TLVLDLDETLIHSs 919 (1218)
.+++|||+||+.+.
T Consensus 2 li~~DlDGTLl~~~ 15 (259)
T 3zx4_A 2 IVFTDLDGTLLDER 15 (259)
T ss_dssp EEEECCCCCCSCSS
T ss_pred EEEEeCCCCCcCCC
Confidence 68999999999774
No 230
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=41.36 E-value=8 Score=37.60 Aligned_cols=15 Identities=40% Similarity=0.576 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+++.
T Consensus 3 k~i~fDlDGTL~~~~ 17 (230)
T 3vay_A 3 KLVTFDLDDTLWDTA 17 (230)
T ss_dssp CEEEECCBTTTBCSH
T ss_pred eEEEecCcccCcCCc
Confidence 579999999999875
No 231
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=40.96 E-value=10 Score=36.86 Aligned_cols=16 Identities=25% Similarity=0.214 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++|||+||+.+.
T Consensus 4 ~k~i~FDlDGTL~d~~ 19 (233)
T 3umb_A 4 IRAVVFDAYGTLFDVY 19 (233)
T ss_dssp CCEEEECSBTTTEETH
T ss_pred ceEEEEeCCCcccccH
Confidence 4679999999999874
No 232
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=40.64 E-value=11 Score=37.72 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=14.6
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
....+++|||+||+.+.
T Consensus 27 ~ik~i~fDlDGTL~d~~ 43 (259)
T 4eek_A 27 PFDAVLFDLDGVLVESE 43 (259)
T ss_dssp CCSEEEEESBTTTEECH
T ss_pred CCCEEEECCCCCcccCH
Confidence 45689999999999875
No 233
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=40.24 E-value=9 Score=38.44 Aligned_cols=16 Identities=6% Similarity=0.077 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+.+.
T Consensus 6 ik~i~fDlDGTLld~~ 21 (267)
T 1swv_A 6 IEAVIFAWAGTTVDYG 21 (267)
T ss_dssp CCEEEECSBTTTBSTT
T ss_pred ceEEEEecCCCEEeCC
Confidence 3578999999999874
No 234
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=40.10 E-value=10 Score=38.24 Aligned_cols=16 Identities=44% Similarity=0.411 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
...+++|||+||+.+.
T Consensus 23 ~k~iiFDlDGTL~d~~ 38 (243)
T 2hsz_A 23 FKLIGFDLDGTLVNSL 38 (243)
T ss_dssp CSEEEECSBTTTEECH
T ss_pred CCEEEEcCCCcCCCCH
Confidence 3479999999999884
No 235
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=39.93 E-value=9.3 Score=38.24 Aligned_cols=46 Identities=11% Similarity=0.049 Sum_probs=26.2
Q ss_pred CCCCchHHHHHHHhCCEEecccCCCccEEEeCCCCCHHHHHHHHcCCcEEcHHH
Q 000938 1145 NPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGW 1198 (1218)
Q Consensus 1145 nPer~~LwkLAeqLGAtVssdVd~kVTHLVAss~gTeKVk~Alk~GIkIVSPdW 1198 (1218)
.|+...+...++.+|.. +.- +|+-.....=+..|++.|+..|...|
T Consensus 165 Kp~p~~~~~~~~~l~~~------~~~--~~~vGDs~~Di~~a~~aG~~~v~v~~ 210 (240)
T 2hi0_A 165 KPAPDMTSECVKVLGVP------RDK--CVYIGDSEIDIQTARNSEMDEIAVNW 210 (240)
T ss_dssp TTSSHHHHHHHHHHTCC------GGG--EEEEESSHHHHHHHHHTTCEEEEESS
T ss_pred CCCHHHHHHHHHHcCCC------HHH--eEEEcCCHHHHHHHHHCCCeEEEECC
Confidence 45556677888888843 222 22222223456677778887554444
No 236
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=39.67 E-value=9.7 Score=37.93 Aligned_cols=18 Identities=28% Similarity=0.462 Sum_probs=14.8
Q ss_pred CCCeEEEEeCCCceeecc
Q 000938 902 ARKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 902 ~kKLTLVLDLDETLIHSs 919 (1218)
...+.+++|||+||+.+.
T Consensus 28 ~~ik~i~fDlDGTL~d~~ 45 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLDTE 45 (250)
T ss_dssp CCCSEEEEETBTTTBCHH
T ss_pred cCCcEEEEcCCCCcCCCH
Confidence 345689999999999874
No 237
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=39.66 E-value=8.2 Score=37.76 Aligned_cols=17 Identities=12% Similarity=0.088 Sum_probs=14.3
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
..+.+++||||||+.+.
T Consensus 14 ~~k~i~fDlDGTL~d~~ 30 (254)
T 3umg_A 14 NVRAVLFDTFGTVVDWR 30 (254)
T ss_dssp BCCEEEECCBTTTBCHH
T ss_pred CceEEEEeCCCceecCc
Confidence 35689999999999874
No 238
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=39.53 E-value=8.6 Score=37.36 Aligned_cols=15 Identities=20% Similarity=0.064 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+.+.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (234)
T 3u26_A 3 RAVFFDSLGTLNSVE 17 (234)
T ss_dssp CEEEECSTTTTBCHH
T ss_pred cEEEEcCCCcccccc
Confidence 478999999999875
No 239
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=39.23 E-value=11 Score=37.31 Aligned_cols=16 Identities=31% Similarity=0.397 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++|||+||+.+.
T Consensus 29 ik~iifDlDGTL~d~~ 44 (240)
T 3sd7_A 29 YEIVLFDLDGTLTDPK 44 (240)
T ss_dssp CSEEEECSBTTTEECH
T ss_pred ccEEEEecCCcCccCH
Confidence 3689999999999875
No 240
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=38.88 E-value=11 Score=37.21 Aligned_cols=16 Identities=19% Similarity=0.318 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
...+++|||+||+.+.
T Consensus 3 ~k~viFDlDGTL~d~~ 18 (220)
T 2zg6_A 3 YKAVLVDFGNTLVGFK 18 (220)
T ss_dssp CCEEEECSBTTTEEEE
T ss_pred ceEEEEcCCCceeccc
Confidence 3579999999999885
No 241
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=38.88 E-value=8.6 Score=38.18 Aligned_cols=15 Identities=33% Similarity=0.660 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
..+++||||||+.+.
T Consensus 3 k~iiFDlDGTL~d~~ 17 (241)
T 2hoq_A 3 KVIFFDLDDTLVDTS 17 (241)
T ss_dssp CEEEECSBTTTBCHH
T ss_pred cEEEEcCCCCCCCCh
Confidence 478999999999875
No 242
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=38.74 E-value=10 Score=37.58 Aligned_cols=16 Identities=31% Similarity=0.216 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++||||||+.+.
T Consensus 14 ~k~viFDlDGTL~d~~ 29 (240)
T 2no4_A 14 LRACVFDAYGTLLDVH 29 (240)
T ss_dssp CCEEEECCBTTTBCTT
T ss_pred ccEEEEeCCCcccccH
Confidence 4689999999999764
No 243
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=38.19 E-value=9.5 Score=36.97 Aligned_cols=16 Identities=31% Similarity=0.345 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
.+.+++|||+||+.+.
T Consensus 5 ~k~i~fDlDGTL~d~~ 20 (240)
T 3qnm_A 5 YKNLFFDLDDTIWAFS 20 (240)
T ss_dssp CSEEEECCBTTTBCHH
T ss_pred ceEEEEcCCCCCcCch
Confidence 4689999999999774
No 244
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=37.75 E-value=10 Score=39.00 Aligned_cols=15 Identities=27% Similarity=0.383 Sum_probs=13.4
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+++.
T Consensus 36 k~iifDlDGTLlds~ 50 (275)
T 2qlt_A 36 NAALFDVDGTIIISQ 50 (275)
T ss_dssp SEEEECCBTTTEECH
T ss_pred CEEEECCCCCCCCCH
Confidence 578999999999885
No 245
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=37.35 E-value=11 Score=37.38 Aligned_cols=17 Identities=29% Similarity=0.524 Sum_probs=14.2
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
..+.+++|||+||+.+.
T Consensus 23 ~~k~i~fDlDGTL~d~~ 39 (243)
T 3qxg_A 23 KLKAVLFDMDGVLFNSM 39 (243)
T ss_dssp CCCEEEECSBTTTBCCH
T ss_pred cCCEEEEcCCCCCCCCH
Confidence 34689999999999875
No 246
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=37.03 E-value=10 Score=38.62 Aligned_cols=15 Identities=27% Similarity=0.543 Sum_probs=12.9
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+.|.
T Consensus 27 KaViFDlDGTLvDs~ 41 (250)
T 4gib_A 27 EAFIFDLDGVITDTA 41 (250)
T ss_dssp CEEEECTBTTTBCCH
T ss_pred heeeecCCCcccCCH
Confidence 578999999999763
No 247
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=35.96 E-value=9.4 Score=37.59 Aligned_cols=17 Identities=29% Similarity=0.481 Sum_probs=15.0
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
+++.+++||||||+.+.
T Consensus 3 ~~k~viFDlDGTL~Ds~ 19 (197)
T 1q92_A 3 RALRVLVDMDGVLADFE 19 (197)
T ss_dssp CCEEEEECSBTTTBCHH
T ss_pred CceEEEEeCCCCCccCc
Confidence 56789999999999986
No 248
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=35.62 E-value=22 Score=37.48 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=36.4
Q ss_pred EEEecCCHHHHHHHHhc-cceEEEEcCCcHHHHHHHHHHHc
Q 000938 956 WTKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLD 995 (1218)
Q Consensus 956 YVKlRPGLdEFLeeLSk-~YEIVIFTAGtreYAd~VLdiLD 995 (1218)
-+.+|||+.+|++.|.+ .+.++|+|.+...++.+|++.+.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g 179 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAG 179 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTT
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcC
Confidence 37899999999999986 58999999999999999999775
No 249
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=34.92 E-value=13 Score=36.89 Aligned_cols=15 Identities=47% Similarity=0.722 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
..+++|||+||+.+.
T Consensus 4 k~viFDlDGTL~d~~ 18 (222)
T 2nyv_A 4 RVILFDLDGTLIDSA 18 (222)
T ss_dssp CEEEECTBTTTEECH
T ss_pred CEEEECCCCcCCCCH
Confidence 478999999999875
No 250
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=34.13 E-value=14 Score=36.42 Aligned_cols=17 Identities=29% Similarity=0.339 Sum_probs=14.2
Q ss_pred CCeEEEEeCCCceeecc
Q 000938 903 RKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 903 kKLTLVLDLDETLIHSs 919 (1218)
....+++|||+||+.+.
T Consensus 27 ~ik~viFD~DGTL~d~~ 43 (229)
T 4dcc_A 27 GIKNLLIDLGGVLINLD 43 (229)
T ss_dssp CCCEEEECSBTTTBCBC
T ss_pred CCCEEEEeCCCeEEeCC
Confidence 34689999999999864
No 251
>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A
Probab=33.91 E-value=37 Score=37.27 Aligned_cols=81 Identities=12% Similarity=0.102 Sum_probs=50.5
Q ss_pred HHHhhhhccCcee---eeeccccCCCCCCCCchHHHHHHHhCCEEecc-----cCC---------------CccEEEeCC
Q 000938 1121 AAEQRKILAGCRI---VFSRVFPVGEANPHLHPLWQTAEQFGAVCTKH-----IDD---------------QVTHVVANS 1177 (1218)
Q Consensus 1121 ~eiRrqILkGCvI---vFSGIfP~g~~nPer~~LwkLAeqLGAtVssd-----Vd~---------------kVTHLVAss 1177 (1218)
...+.++|+|+.| -++--+|+|. ..+..+++.+||.-... ++. ...+++.+.
T Consensus 129 ~~~~gkLf~~~~I~ciNls~dI~GG~-----e~issIleahG~~~~~~l~~~~~~~~dl~~n~~~~~~~~~~~~~ILia~ 203 (256)
T 3t7k_A 129 TKLPTKVFERANIRCINLVNDIPGGV-----DTIGSVLKAHGIEKINVLRSKKCTFEDIIPNDVSKQENGGIFKYVLIVT 203 (256)
T ss_dssp TTSSSCHHHHTTCCEEEEETTCTTCH-----HHHHHHHHHTTCCEEEEECTTTCCGGGCCCCC--------CCSEEEECS
T ss_pred hccccccccCCcceeeeeccCCCCCH-----HHHHHHHHHcCCceeeecccccccHHHhhhccccccccCCCCCEEEEEc
Confidence 4445679999954 4466677763 46778899999963222 222 233555544
Q ss_pred CC--CHHHHHHHH-----cCCcEEcHHHHHHHHHhc
Q 000938 1178 LG--TDKVNWALS-----TGRFVVHPGWVEASALLY 1206 (1218)
Q Consensus 1178 ~g--TeKVk~Alk-----~GIkIVSPdWLedCl~~w 1206 (1218)
.. ..++++..+ ..+.+|.++|...|+...
T Consensus 204 K~~q~k~Fkk~~~~~~~n~~~lvveWdWCVksIF~l 239 (256)
T 3t7k_A 204 KASQVKKFTKLINDRDKNETILIVEWNWCVESIFHL 239 (256)
T ss_dssp CHHHHHHHHHHHHHHSTTSCEEEECHHHHHHHHHTT
T ss_pred cHHHHHHHHHHhhcccccceEEEEEcHHHHHHHhhe
Confidence 32 224444442 346899999999999853
No 252
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=33.25 E-value=13 Score=37.48 Aligned_cols=15 Identities=27% Similarity=0.321 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++|||+||+.+.
T Consensus 3 k~viFDlDGTL~d~~ 17 (253)
T 1qq5_A 3 KAVVFDAYGTLFDVQ 17 (253)
T ss_dssp CEEEECTBTTTBCTT
T ss_pred cEEEEeCCCCCCccH
Confidence 478999999999874
No 253
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=32.61 E-value=12 Score=38.47 Aligned_cols=20 Identities=35% Similarity=0.484 Sum_probs=16.2
Q ss_pred hcCCCeEEEEeCCCceeecc
Q 000938 900 FSARKLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 900 Ls~kKLTLVLDLDETLIHSs 919 (1218)
-..+...+++|||+||+.+.
T Consensus 14 ~~~~~k~viFDlDGTLvds~ 33 (260)
T 2gfh_A 14 GLSRVRAVFFDLDNTLIDTA 33 (260)
T ss_dssp ECCCCCEEEECCBTTTBCHH
T ss_pred ccccceEEEEcCCCCCCCCH
Confidence 34566789999999999875
No 254
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=30.66 E-value=16 Score=37.23 Aligned_cols=15 Identities=33% Similarity=0.337 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++|||+||+.+.
T Consensus 2 k~iiFDlDGTL~d~~ 16 (263)
T 3k1z_A 2 RLLTWDVKDTLLRLR 16 (263)
T ss_dssp CEEEECCBTTTEEES
T ss_pred cEEEEcCCCceeCCC
Confidence 468999999999975
No 255
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=29.62 E-value=38 Score=38.25 Aligned_cols=50 Identities=4% Similarity=-0.018 Sum_probs=40.8
Q ss_pred EEecCCHHHHHHHHh-ccceEEEEcCCcHHHHHHHHHHHcC-----CCceeeeeee
Q 000938 957 TKLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDP-----KGVLFAGRVI 1006 (1218)
Q Consensus 957 VKlRPGLdEFLeeLS-k~YEIVIFTAGtreYAd~VLdiLDP-----~g~LF~~RIy 1006 (1218)
++++|+..++++.|. .-++++|.|+|...++.+|++.|.. .-.+++.|+.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~ 275 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLM 275 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEE
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEE
Confidence 679999999999997 5699999999999999999997642 2235566554
No 256
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=29.24 E-value=16 Score=39.26 Aligned_cols=14 Identities=7% Similarity=0.097 Sum_probs=0.0
Q ss_pred eEEEEeCCCceeec
Q 000938 905 LCLVLDLDHTLLNS 918 (1218)
Q Consensus 905 LTLVLDLDETLIHS 918 (1218)
+.+++|||+||+.+
T Consensus 22 kli~fDlDGTLld~ 35 (332)
T 1y8a_A 22 HMFFTDWEGPWILT 35 (332)
T ss_dssp CEEEECSBTTTBCC
T ss_pred eEEEEECcCCCcCc
No 257
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=29.16 E-value=16 Score=36.98 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=12.8
Q ss_pred eEEEEeCCCceeecc
Q 000938 905 LCLVLDLDHTLLNSA 919 (1218)
Q Consensus 905 LTLVLDLDETLIHSs 919 (1218)
+.+++||||||+.|.
T Consensus 6 KaViFDlDGTL~Ds~ 20 (243)
T 4g9b_A 6 QGVIFDLDGVITDTA 20 (243)
T ss_dssp CEEEECSBTTTBCCH
T ss_pred cEEEEcCCCcccCCH
Confidence 578999999999764
No 258
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=27.85 E-value=20 Score=34.61 Aligned_cols=13 Identities=31% Similarity=0.355 Sum_probs=11.7
Q ss_pred eEEEEeCCCceee
Q 000938 905 LCLVLDLDHTLLN 917 (1218)
Q Consensus 905 LTLVLDLDETLIH 917 (1218)
..+++||||||+.
T Consensus 3 k~viFD~DGTL~d 15 (206)
T 1rku_A 3 EIACLDLEGVLVP 15 (206)
T ss_dssp EEEEEESBTTTBC
T ss_pred cEEEEccCCcchh
Confidence 4689999999998
No 259
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=27.78 E-value=20 Score=36.03 Aligned_cols=15 Identities=27% Similarity=0.383 Sum_probs=13.0
Q ss_pred CeEEEEeCCCceeec
Q 000938 904 KLCLVLDLDHTLLNS 918 (1218)
Q Consensus 904 KLTLVLDLDETLIHS 918 (1218)
...+++|||+||+.+
T Consensus 6 ~k~viFD~DGTL~d~ 20 (236)
T 2fea_A 6 KPFIICDFDGTITMN 20 (236)
T ss_dssp CEEEEECCTTTTBSS
T ss_pred CcEEEEeCCCCCCcc
Confidence 458999999999965
No 260
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=24.95 E-value=20 Score=37.23 Aligned_cols=16 Identities=25% Similarity=0.293 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
-..+++||||||+.+.
T Consensus 10 ikaviFDlDGTL~ds~ 25 (261)
T 1yns_A 10 VTVILLDIEGTTTPIA 25 (261)
T ss_dssp CCEEEECCBTTTBCHH
T ss_pred CCEEEEecCCCccchh
Confidence 4689999999999874
No 261
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=23.01 E-value=55 Score=39.33 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=37.4
Q ss_pred eEEEEecCCHHHHHHHHhccceEEEEcCCcHHHHHHHHHHH-c
Q 000938 954 GMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVL-D 995 (1218)
Q Consensus 954 ~~YVKlRPGLdEFLeeLSk~YEIVIFTAGtreYAd~VLdiL-D 995 (1218)
..||.+-|.+..+|++|.+.=.++|-|++...|++.+++.| +
T Consensus 242 ekYv~kdp~l~~~L~~Lr~~GKlfLiTNS~~~yv~~~m~yllg 284 (555)
T 2jc9_A 242 EKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFD 284 (555)
T ss_dssp HHHBCCCTHHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHTC
T ss_pred HHhcCCChHHHHHHHHHHHcCCEEEEeCCChHHHHHHHHHhcC
Confidence 35788899999999999865499999999999999999988 5
No 262
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=21.65 E-value=14 Score=34.87 Aligned_cols=16 Identities=31% Similarity=0.407 Sum_probs=12.8
Q ss_pred CeEEEEeCCCceeecc
Q 000938 904 KLCLVLDLDHTLLNSA 919 (1218)
Q Consensus 904 KLTLVLDLDETLIHSs 919 (1218)
|+.+++||||||+.+.
T Consensus 9 k~ivifDlDGTL~d~~ 24 (201)
T 4ap9_A 9 KKVAVIDIEGTLTDFE 24 (201)
T ss_dssp SCEEEEECBTTTBCCC
T ss_pred ceeEEecccCCCcchH
Confidence 5566699999999764
No 263
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=21.62 E-value=26 Score=36.77 Aligned_cols=14 Identities=21% Similarity=0.290 Sum_probs=0.0
Q ss_pred eEEEEeCCCceeec
Q 000938 905 LCLVLDLDHTLLNS 918 (1218)
Q Consensus 905 LTLVLDLDETLIHS 918 (1218)
..+++||||||+.+
T Consensus 32 kaviFDlDGTLvDs 45 (253)
T 2g80_A 32 STYLLDIEGTVCPI 45 (253)
T ss_dssp SEEEECCBTTTBCT
T ss_pred cEEEEcCCCCcccc
Done!