BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000940
(1216 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IQ3|A Chain A, Solution Structure Of The Eps15 Homology Domain Of A Human
Pob1
Length = 110
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 417 GALNSTSSQSHVPWPKMTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLK 476
G+L SS PW ++T + + Y F + D I+G A N F +L L
Sbjct: 1 GSLQDNSSYPDEPW-RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELS 59
Query: 477 QVWDLSDQDNDGMLSLKEFCTALYLMERYREGRPLPTMLPSTIMPD 522
+W+LSD D DG L+L EFC A +L+ + G PLP LP T+ P+
Sbjct: 60 YIWELSDADCDGALTLPEFCAAFHLIVARKNGYPLPEGLPPTLQPE 105
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 28/67 (41%)
Query: 16 FRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTV 75
FR D ISG+ A FF S L L+ +W +D G L EF A L+
Sbjct: 28 FRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVA 87
Query: 76 AQSKREL 82
++ L
Sbjct: 88 RKNGYPL 94
>pdb|1FI6|A Chain A, Solution Structure Of The Reps1 Eh Domain
Length = 92
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%)
Query: 432 KMTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLS 491
K+T + Q Y F + D +G I G A F +LP L +W+LSD D DG L+
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALT 61
Query: 492 LKEFCTALYLMERYREGRPLPTMLPSTIMP 521
L EFC A +L+ + G LP LP ++MP
Sbjct: 62 LDEFCAAFHLVVARKNGYDLPEKLPESLMP 91
Score = 37.7 bits (86), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 16 FRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTV 75
F+ D +G I G+ A FF S LP L+ +W +D K G L EF A LV
Sbjct: 15 FKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVA 74
Query: 76 AQSKREL 82
++ +L
Sbjct: 75 RKNGYDL 81
>pdb|2QPT|A Chain A, Crystal Structure Of An Ehd Atpase Involved In Membrane
Remodelling
Length = 550
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 440 KYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTAL 499
KY ++F + DGK++G +A + +LP VL ++W LSD D DGML +EF A
Sbjct: 459 KYDEIFYNL-APADGKLSGSKAKTWMVGTKLPNSVLGRIWKLSDVDRDGMLDDEEFALAS 517
Query: 500 YLMERYREGRPLPTMLPSTIMP 521
+L+E EG LPT LP ++P
Sbjct: 518 HLIEAKLEGHGLPTNLPRRLVP 539
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 23 GDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLV 73
DG++SG++A + G+ LP VL ++W +D + G L+ EF A L+
Sbjct: 470 ADGKLSGSKAKTWMVGTKLPNSVLGRIWKLSDVDRDGMLDDEEFALASHLI 520
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 440 KYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTAL 499
KY ++F D G +TG QA + + LP+ L +W+LSD D DG L+ +EF A+
Sbjct: 15 KYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAM 74
Query: 500 YLMERYREGRPLPTMLPSTIMP 521
+L++ G+PLP +LP +P
Sbjct: 75 HLIDVAMSGQPLPPVLPPEYIP 96
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 12 FEAYFRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALK 71
+ F D G ++G +A S+LP+ LA +W+ +D + G L EF A+
Sbjct: 16 YRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH 75
Query: 72 LVTVAQSKRELTPDIVKAALYGPASAR 98
L+ VA S + L P V Y P S R
Sbjct: 76 LIDVAMSGQPLPP--VLPPEYIPPSFR 100
>pdb|1QJT|A Chain A, Solution Structure Of The Apo Eh1 Domain Of Mouse
Epidermal Growth Factor Receptor Substrate 15, Eps15
Length = 99
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 4 QTATNSDLFEAYFRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNR 63
Q ++ + ++E Y+R+ + G++ +A AF + S LP +L ++W AD G L++
Sbjct: 5 QLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSK 64
Query: 64 AEFFNALKLVTVAQSKREL 82
EFF AL+LV AQ+ E+
Sbjct: 65 QEFFVALRLVACAQNGLEV 83
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 441 YTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTALY 500
Y K + QV+ G++ A LP +L ++WDL+D D G+LS +EF AL
Sbjct: 13 YEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALR 72
Query: 501 LMERYREG 508
L+ + G
Sbjct: 73 LVACAQNG 80
>pdb|2KHN|A Chain A, Nmr Solution Structure Of The Eh 1 Domain From Human
Intersectin-1 Protein. Northeast Structural Genomics
Consortium Target Hr3646e
Length = 121
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 454 GKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTALYLMERYREGRPLPT 513
G ITG+QA N F LP+ VL Q+W L+D +NDG + EF A+ L++ +G LP+
Sbjct: 47 GFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPS 106
Query: 514 MLPSTI 519
LP +
Sbjct: 107 ALPPVM 112
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 25 GQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKREL 82
G I+G +A FF S LP+ VLAQ+W+ AD G +++ EF A+KL+ + +L
Sbjct: 47 GFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQL 104
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 57.8 bits (138), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 429 PWPKMTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDG 488
PW + + KY +F + +G ++G++ + L+ +LP ++L +VW+LSD D+DG
Sbjct: 6 PW-AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDG 63
Query: 489 MLSLKEFCTALYLMERYREGRPLPTMLPSTIMP 521
ML EF A++L+ E P+P LP ++P
Sbjct: 64 MLDRDEFAVAMFLVYCALEKEPVPMSLPPALVP 96
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 24 DGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKRELT 83
+G +SG + S LP +L +VW +D G L+R EF A+ LV A K E
Sbjct: 28 NGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEK-EPV 86
Query: 84 PDIVKAALYGPASAR 98
P + AL P+ +
Sbjct: 87 PMSLPPALVPPSKRK 101
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 429 PWPKMTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDG 488
PW + + KY +F + +G ++G++ + L+ +LP ++L +VW+LSD D+DG
Sbjct: 1 PW-AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDG 58
Query: 489 MLSLKEFCTALYLMERYREGRPLPTMLPSTIMP 521
ML EF A++L+ E P+P LP ++P
Sbjct: 59 MLDRDEFAVAMFLVYCALEKEPVPMSLPPALVP 91
Score = 34.7 bits (78), Expect = 0.33, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 24 DGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKRELT 83
+G +SG + S LP +L +VW +D G L+R EF A+ LV A K E
Sbjct: 23 NGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEK-EPV 81
Query: 84 PDIVKAALYGPA 95
P + AL P+
Sbjct: 82 PMSLPPALVPPS 93
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 57.0 bits (136), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 429 PWPKMTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDG 488
PW + + KY +F + +G ++G++ + L+ +LP ++L +VW+LSD D+DG
Sbjct: 1 PW-AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDG 58
Query: 489 MLSLKEFCTALYLMERYREGRPLPTMLPSTIMP 521
ML EF A++L+ E P+P LP ++P
Sbjct: 59 MLDRDEFAVAMFLVYCALEKEPVPMSLPPALVP 91
Score = 34.7 bits (78), Expect = 0.33, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 24 DGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKRELT 83
+G +SG + S LP +L +VW +D G L+R EF A+ LV A K E
Sbjct: 23 NGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEK-EPV 81
Query: 84 PDIVKAALYGPA 95
P + AL P+
Sbjct: 82 PMSLPPALVPPS 93
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 429 PWPKMTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDG 488
PW + + KY +F + +G ++G++ + L+ +LP ++L +VW+LSD D+DG
Sbjct: 6 PW-AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDG 63
Query: 489 MLSLKEFCTALYLMERYREGRPLPTMLPSTIMP 521
ML EF A++L+ E P+P LP ++P
Sbjct: 64 MLDRDEFAVAMFLVYCALEKEPVPMSLPPALVP 96
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 24 DGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKRELT 83
+G +SG + S LP +L +VW +D G L+R EF A+ LV A K E
Sbjct: 28 NGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEK-EPV 86
Query: 84 PDIVKAALYGPA 95
P + AL P+
Sbjct: 87 PMSLPPALVPPS 98
>pdb|3FIA|A Chain A, Crystal Structure Of The Eh 1 Domain From Human
Intersectin- 1 Protein. Northeast Structural Genomics
Consortium Target Hr3646e
Length = 121
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 454 GKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTALYLMERYREGRPLPT 513
G ITG+QA N F LP+ VL Q+W L+D +NDG EF A L++ +G LP+
Sbjct: 47 GFITGDQARNFFFQSGLPQPVLAQIWALADXNNDGRXDQVEFSIAXKLIKLKLQGYQLPS 106
Query: 514 MLP 516
LP
Sbjct: 107 ALP 109
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 25 GQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKREL 82
G I+G +A FF S LP+ VLAQ+W+ AD G ++ EF A KL+ + +L
Sbjct: 47 GFITGDQARNFFFQSGLPQPVLAQIWALADXNNDGRXDQVEFSIAXKLIKLKLQGYQL 104
>pdb|2KFF|A Chain A, Structure Of The C-Terminal Domain Of Ehd1 With
Fnyestnpftak
pdb|2KFG|A Chain A, Structure Of The C-Terminal Domain Of Ehd1 In Complex With
Fnyestdpftak
pdb|2KFH|A Chain A, Structure Of The C-Terminal Domain Of Ehd1 With
Fnyestgpftak
pdb|2KSP|A Chain A, Mechanism For The Selective Interaction Of C-Terminal
Eh-Dom Proteins With Specific Npf-Containing Partners
Length = 105
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 453 DGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTALYLMERYREGRPLP 512
+GKITG A + +LP VL ++W L+D D DG+L +EF A +L++ EG LP
Sbjct: 30 NGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGHELP 89
Query: 513 TMLPSTIMP 521
LP ++P
Sbjct: 90 ADLPPHLVP 98
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 24 DGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKRELT 83
+G+I+GA A S LP VL ++W AD K G L+ EF A L+ V EL
Sbjct: 30 NGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGHELP 89
Query: 84 PDI 86
D+
Sbjct: 90 ADL 92
>pdb|2JQ6|A Chain A, Structure Of Eh-Domain Of Ehd1
Length = 139
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 453 DGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTALYLMERYREGRPLP 512
+GKITG A + +LP VL ++W L+D D DG+L +EF A +L++ EG LP
Sbjct: 64 NGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGHELP 123
Query: 513 TMLPSTIMP 521
LP ++P
Sbjct: 124 ADLPPHLVP 132
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 24 DGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKRELT 83
+G+I+GA A S LP VL ++W AD K G L+ EF A L+ V EL
Sbjct: 64 NGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGHELP 123
Query: 84 PDI 86
D+
Sbjct: 124 ADL 126
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 436 SEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEF 495
+E KY ++F++ D D DG ++G + +FL LP +L +W L D + G LS +F
Sbjct: 7 AEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQF 66
Query: 496 CTALYLM-ERYREGRPLPTMLPSTIMP 521
A +L+ ++ +G P +L ++P
Sbjct: 67 ALAFHLISQKLIKGIDPPHVLTPEMIP 93
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 12 FEAYFRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALK 71
++ F + D D DG +SG E F + LP +LA +WS D + G L++ +F A
Sbjct: 12 YDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71
Query: 72 LVTVAQSKRELTPDIVKAALYGPA 95
L++ K P ++ + P+
Sbjct: 72 LISQKLIKGIDPPHVLTPEMIPPS 95
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 36.2 bits (82), Expect = 0.11, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 439 QKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEF 495
++ F Q D D GKIT E+ LF + E QV D++NDG + +EF
Sbjct: 123 ERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEF 179
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 431 PKMTHSEVQKYTKVFVQVDIDRDGKITGE---QAYNLFLSWRLPREVLKQVWDLS----D 483
P+ +S K F D+DRDGKI+ Q L + ++ E L+ + D + D
Sbjct: 106 PEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEAD 165
Query: 484 QDNDGMLSLKEFCTALYLME 503
+D DG +S EF +L M+
Sbjct: 166 EDGDGAVSFVEFTKSLEKMD 185
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 33.9 bits (76), Expect = 0.64, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 439 QKYTKVFVQVDIDRDGKIT-GE--QAYNLFLSWRLPREVLKQVWDLS----DQDNDGMLS 491
QK F D+D+DG I+ GE Q + + L L+Q+ D + D+D DG +S
Sbjct: 76 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRIS 135
Query: 492 LKEFCTAL 499
+EFC +
Sbjct: 136 FEEFCAVV 143
Score = 32.3 bits (72), Expect = 1.6, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 433 MTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSL 492
M E+++ K F ++D+D G ++ E+ +L + P ++++V D+ D D +G +
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNP--LVQRVIDIFDTDGNGEVDF 58
Query: 493 KEF 495
KEF
Sbjct: 59 KEF 61
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 33.5 bits (75), Expect = 0.67, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 439 QKYTKVFVQVDIDRDGKIT-GE--QAYNLFLSWRLPREVLKQVWDLS----DQDNDGMLS 491
QK F D+D+DG I+ GE Q + + L L+Q+ D + D+D DG +S
Sbjct: 75 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRIS 134
Query: 492 LKEFCTAL 499
+EFC +
Sbjct: 135 FEEFCAVV 142
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 437 EVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEF 495
E+++ K F ++D+D G ++ E+ +L + P ++++V D+ D D +G + KEF
Sbjct: 4 EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNP--LVQRVIDIFDTDGNGEVDFKEF 60
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 33.5 bits (75), Expect = 0.68, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 439 QKYTKVFVQVDIDRDGKIT-GE--QAYNLFLSWRLPREVLKQVWDLS----DQDNDGMLS 491
QK F D+D+DG I+ GE Q + + L L+Q+ D + D+D DG +S
Sbjct: 90 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRIS 149
Query: 492 LKEFCTAL 499
+EFC +
Sbjct: 150 FEEFCAVV 157
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 437 EVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEF 495
E+++ K F ++D+D G ++ E+ +L + P ++++V D+ D D +G + KEF
Sbjct: 19 EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNP--LVQRVIDIFDTDGNGEVDFKEF 75
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 33.5 bits (75), Expect = 0.73, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 439 QKYTKVFVQVDIDRDGKIT-GE--QAYNLFLSWRLPREVLKQVWDLS----DQDNDGMLS 491
QK F D+D+DG I+ GE Q + + L L+Q+ D + D+D DG +S
Sbjct: 89 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRIS 148
Query: 492 LKEFCTAL 499
+EFC +
Sbjct: 149 FEEFCAVV 156
Score = 31.2 bits (69), Expect = 3.6, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 437 EVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEF 495
E+++ K F ++D+D G ++ E+ +L + P ++++V D+ D D +G + KEF
Sbjct: 18 EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNP--LVQRVIDIFDTDGNGEVDFKEF 74
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 439 QKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTA 498
++ + F D D+ GKIT E+ NLF + + V +DQ+ D M+ EF +
Sbjct: 435 ERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSM 494
Query: 499 LY 500
++
Sbjct: 495 MH 496
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 445 FVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTAL 499
F Q D D GKIT E+ LF + E QV D++NDG + +EF +
Sbjct: 403 FQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 31.6 bits (70), Expect = 3.1, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 16 FRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFF 67
++ D+DGDG+++ E +FF+ + K +A+ AD G++ EF
Sbjct: 11 YKLMDVDGDGKLTKEEVTSFFKKHGIEK--VAEQVMKADANGDGYITLEEFL 60
Score = 30.8 bits (68), Expect = 4.5, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 448 VDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEF 495
+D+D DGK+T E+ + F + + V +QV +D + DG ++L+EF
Sbjct: 14 MDVDGDGKLTKEEVTSFFKKHGIEK-VAEQVMK-ADANGDGYITLEEF 59
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 MAGQTATNSDL-FEAYFRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAG 59
+ GQ ++ + + ++ D+DGDG+++ E +FF+ + K +A+ AD G
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK--VAEQVMKADANGDG 122
Query: 60 FLNRAEFF 67
++ EF
Sbjct: 123 YITLEEFL 130
Score = 30.4 bits (67), Expect = 6.2, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 448 VDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEF 495
+D+D DGK+T E+ + F + + V +QV +D + DG ++L+EF
Sbjct: 84 MDVDGDGKLTKEEVTSFFKKHGIEK-VAEQVMK-ADANGDGYITLEEF 129
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 31.2 bits (69), Expect = 3.5, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 12 FEAYFRRADLDGDGQISGAEAVAFF--------QGSNLPKQVLAQVWSHADQRKAGFLNR 63
EA F++ D +GDG ++ E F + K+ A++ AD+ G +++
Sbjct: 9 LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISK 68
Query: 64 AEFFNA 69
EF NA
Sbjct: 69 EEFLNA 74
>pdb|2X49|A Chain A, Crystal Structure Of The C-Terminal Domain Of Inva
pdb|2X4A|A Chain A, Crystal Structure Of The C-Terminal Domain Of Inva
Length = 333
Score = 31.2 bits (69), Expect = 3.9, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 587 KHLMDQLSKEEQESLNAKLKEATEADKKVEELEKEILTSREKIQFCSTKMQELILYKSRC 646
KH++DQL + + L L+ AT +++ E+ + +L+ R ++ M+ L L+ R
Sbjct: 151 KHMLDQLEAKFPDLLKEVLRHATV--QRISEVLQRLLSERVSVRNMKLIMEALALWAPRE 208
Query: 647 DNRLNEITERVSG 659
+ +N + E + G
Sbjct: 209 KDVIN-LVEHIRG 220
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 31.2 bits (69), Expect = 3.9, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 MAGQTATNSDL-FEAYFRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAG 59
+ GQ ++ + + ++ D+DGDG+++ E +FF+ + K +A+ AD G
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK--VAEQVMKADANGDG 122
Query: 60 FLNRAEFF 67
++ EF
Sbjct: 123 YITLEEFL 130
Score = 30.4 bits (67), Expect = 7.0, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 448 VDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEF 495
+D+D DGK+T E+ + F + + V +QV +D + DG ++L+EF
Sbjct: 84 MDVDGDGKLTKEEVTSFFKKHGIEK-VAEQVMK-ADANGDGYITLEEF 129
>pdb|2CLY|B Chain B, Subcomplex Of The Stator Of Bovine Mitochondrial Atp
Synthase
pdb|2CLY|E Chain E, Subcomplex Of The Stator Of Bovine Mitochondrial Atp
Synthase
Length = 160
Score = 30.4 bits (67), Expect = 6.3, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 581 KVPELEKHLMDQLSKEEQESLNAKLKEATEADKKVEELEKEILTSREKIQFCSTKMQEL 639
KVP E Q+ EE+E + + + T++ +++E EKE+ R I F +++L
Sbjct: 77 KVPIPEDKYTAQVDAEEKEDVKSCAEFLTQSKTRIQEYEKELEKMRNIIPFDQMTIEDL 135
>pdb|2XG7|A Chain A, Crystal Structure Of Bst2-Tetherin Ectodomain Expressed In
Hek293t Cells
pdb|2XG7|C Chain C, Crystal Structure Of Bst2-Tetherin Ectodomain Expressed In
Hek293t Cells
Length = 103
Score = 30.4 bits (67), Expect = 6.6, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 607 EATEADKKVEELEKEILTSREKIQFCSTKMQEL 639
E + KKVEELE EI T K+Q S +++ L
Sbjct: 55 EKAQGQKKVEELEGEITTLNHKLQDASAEVERL 87
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 30.0 bits (66), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 445 FVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTA 498
F VD + D I+ ++ F L + + +D D +NDG+LSL+EF A
Sbjct: 100 FRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIA 153
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 29.6 bits (65), Expect = 9.4, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 432 KMTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSW-RLPREV-LKQVWDLSDQDNDGM 489
++T ++ ++ FVQ D + GKI + L + + P E L+ + ++ +N+G
Sbjct: 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQ 62
Query: 490 LSLKEFC 496
L+ EFC
Sbjct: 63 LNFTEFC 69
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.310 0.127 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,699,440
Number of Sequences: 62578
Number of extensions: 1465095
Number of successful extensions: 3110
Number of sequences better than 100.0: 72
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 2964
Number of HSP's gapped (non-prelim): 171
length of query: 1216
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1106
effective length of database: 8,089,757
effective search space: 8947271242
effective search space used: 8947271242
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)