BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000942
(1214 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 153/262 (58%), Gaps = 14/262 (5%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+ +I +G+G+FGKVYK + K T A K I KSE+++ + EI+IL H NI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNI 96
Query: 66 IEMLDSFESPQEFCVVTEFAQGELFE--ILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
+++LD+F ++ EF G + +LE ++ L E Q+Q + KQ + AL+YLH N+I
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR-SIKGTPLYMAPELV-----REQ 177
IHRD+K NIL +KL DFG + A + T+ R S GTP +MAPE+V +++
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS-AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYT-NSVYALIRHIVKDP--VKYPDEMSPNFKSFLK 234
PY++ AD+WSLG+ L E+ +PP + N + L++ +P + P S NFK FLK
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 275
Query: 235 GLLNKVPQNRLTWSALLEHPFV 256
L K R T S LL+HPFV
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 173 bits (439), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 149/261 (57%), Gaps = 12/261 (4%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+ +I +G+G+FGKVYK + K T A K I KSE+++ + EI+IL H NI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNI 96
Query: 66 IEMLDSFESPQEFCVVTEFAQGELFE--ILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
+++LD+F ++ EF G + +LE ++ L E Q+Q + KQ + AL+YLH N+I
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV-----REQP 178
IHRD+K NIL +KL DFG + + S GTP +MAPE+V +++P
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 179 YNHTADLWSLGVILYELFVGQPPFYT-NSVYALIRHIVKDP--VKYPDEMSPNFKSFLKG 235
Y++ AD+WSLG+ L E+ +PP + N + L++ +P + P S NFK FLK
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 236 LLNKVPQNRLTWSALLEHPFV 256
L K R T S LL+HPFV
Sbjct: 277 CLEKNVDARWTTSQLLQHPFV 297
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 151/260 (58%), Gaps = 16/260 (6%)
Query: 10 ELVGE-GSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
E++GE G FGKVYK + K T A K I KSE+++ + EI+IL H NI+++
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 69 LDSFESPQEFCVVTEFAQGELFE--ILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHR 126
LD+F ++ EF G + +LE ++ L E Q+Q + KQ + AL+YLH N+IIHR
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 132
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR--SIKGTPLYMAPELV-----REQPY 179
D+K NIL +KL DFG + A + T + R S GTP +MAPE+V +++PY
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVS-AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 180 NHTADLWSLGVILYELFVGQPPFYT-NSVYALIRHIVKDP--VKYPDEMSPNFKSFLKGL 236
++ AD+WSLG+ L E+ +PP + N + L++ +P + P S NFK FLK
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKC 251
Query: 237 LNKVPQNRLTWSALLEHPFV 256
L K R T S LL+HPFV
Sbjct: 252 LEKNVDARWTTSQLLQHPFV 271
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 148/261 (56%), Gaps = 12/261 (4%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+ +I +G+G+FGKVYK + K T A K I KSE+++ + EI+IL H NI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNI 96
Query: 66 IEMLDSFESPQEFCVVTEFAQGELFE--ILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
+++LD+F ++ EF G + +LE ++ L E Q+Q + KQ + AL+YLH N+I
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV-----REQP 178
IHRD+K NIL +KL DFG + + GTP +MAPE+V +++P
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 179 YNHTADLWSLGVILYELFVGQPPFYT-NSVYALIRHIVKDP--VKYPDEMSPNFKSFLKG 235
Y++ AD+WSLG+ L E+ +PP + N + L++ +P + P S NFK FLK
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 236 LLNKVPQNRLTWSALLEHPFV 256
L K R T S LL+HPFV
Sbjct: 277 CLEKNVDARWTTSQLLQHPFV 297
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 171 bits (432), Expect = 3e-42, Method: Composition-based stats.
Identities = 89/260 (34%), Positives = 148/260 (56%), Gaps = 4/260 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLK 61
++++ ++ +G+G FG VY R K +A+K + K ++ + H LR+EIEI L+
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 62 HQNIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H NI+ M + F + ++ EFA +GEL++ L+ E++ + ++L ALHY H
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
++IHRD+KP+N+L+G +K+ DFG++ + A ++ R + GT Y+ PE++ + ++
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
DLW GV+ YE VG PPF + S R IV +K+P +S K + LL
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 241 PQNRLTWSALLEHPFVKETS 260
P RL ++EHP+VK S
Sbjct: 251 PPQRLPLKGVMEHPWVKANS 270
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 158/264 (59%), Gaps = 14/264 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E + ++ +G+G+FGKVYK + K TG A K I KSE+++ + EIEIL H
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVEIEILATCDHP 68
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGELFE--ILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
I+++L ++ + ++ EF G + +LE D+ L E Q+Q + +Q++ AL++LHS
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR-SIKGTPLYMAPELV-----R 175
RIIHRD+K N+L+ ++L DFG + A + T+ R S GTP +MAPE+V +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVS-AKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 176 EQPYNHTADLWSLGVILYELFVGQPPFYT-NSVYALIRHIVKDP--VKYPDEMSPNFKSF 232
+ PY++ AD+WSLG+ L E+ +PP + N + L++ DP + P + S F+ F
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDF 247
Query: 233 LKGLLNKVPQNRLTWSALLEHPFV 256
LK L+K P+ R + + LLEHPFV
Sbjct: 248 LKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 170 bits (430), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 158/264 (59%), Gaps = 14/264 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E + ++ +G+G+FGKVYK + K TG A K I KSE+++ + EIEIL H
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVEIEILATCDHP 76
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGELFE--ILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
I+++L ++ + ++ EF G + +LE D+ L E Q+Q + +Q++ AL++LHS
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR-SIKGTPLYMAPELV-----R 175
RIIHRD+K N+L+ ++L DFG + A + T+ R S GTP +MAPE+V +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVS-AKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 176 EQPYNHTADLWSLGVILYELFVGQPPFYT-NSVYALIRHIVKDP--VKYPDEMSPNFKSF 232
+ PY++ AD+WSLG+ L E+ +PP + N + L++ DP + P + S F+ F
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDF 255
Query: 233 LKGLLNKVPQNRLTWSALLEHPFV 256
LK L+K P+ R + + LLEHPFV
Sbjct: 256 LKIALDKNPETRPSAAQLLEHPFV 279
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 168 bits (426), Expect = 2e-41, Method: Composition-based stats.
Identities = 89/260 (34%), Positives = 147/260 (56%), Gaps = 4/260 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLK 61
++++ + +G+G FG VY R K +A+K + K ++ + H LR+EIEI L+
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 62 HQNIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H NI+ M + F + ++ EFA +GEL++ L+ E++ + ++L ALHY H
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
++IHRD+KP+N+L+G +K+ DFG++ + A ++ R + GT Y+ PE++ + ++
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
DLW GV+ YE VG PPF + S R IV +K+P +S K + LL
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 241 PQNRLTWSALLEHPFVKETS 260
P RL ++EHP+VK S
Sbjct: 251 PPQRLPLKGVMEHPWVKANS 270
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 152/269 (56%), Gaps = 14/269 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y+++ ++G+GSFG+V K + + T Q A+K I K KD + +E+E+L+KL H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 64 NIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+++ + E F +V E + GELF+ + K E I KQ+ + Y+H +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 123 IIHRDMKPQNILIGAGSV---VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I+HRD+KP+NIL+ + +K+ DFG + NT + I GT Y+APE++R Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVLR-GTY 199
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM------SPNFKSFL 233
+ D+WS GVILY L G PPFY + Y +++ + + KY ++ S + K +
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV--ETGKYAFDLPQWRTISDDAKDLI 257
Query: 234 KGLLNKVPQNRLTWSALLEHPFVKETSDE 262
+ +L P R+T + LEHP++++ S E
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 147/251 (58%), Gaps = 5/251 (1%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+GEGS G V R K++G+ VA+K + + +++ L E+ I+R +H N++EM S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL--LFNEVVIMRDYQHFNVVEMYKS 110
Query: 72 FESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQ 131
+ +E V+ EF QG + L EEQ+ ++ + +++AL YLH+ +IHRD+K
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSD 170
Query: 132 NILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVI 191
+IL+ VKL DFGF +S + + + GTP +MAPE++ Y D+WSLG++
Sbjct: 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIM 230
Query: 192 LYELFVGQPPFYTNSVYALIRHIVKDP---VKYPDEMSPNFKSFLKGLLNKVPQNRLTWS 248
+ E+ G+PP++++S ++ + P +K ++SP + FL+ +L + PQ R T
Sbjct: 231 VIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQ 290
Query: 249 ALLEHPFVKET 259
LL+HPF+ +T
Sbjct: 291 ELLDHPFLLQT 301
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 152/269 (56%), Gaps = 14/269 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y+++ ++G+GSFG+V K + + T Q A+K I K KD + +E+E+L+KL H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 64 NIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+++ + E F +V E + GELF+ + K E I KQ+ + Y+H +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 123 IIHRDMKPQNILIGAGSV---VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I+HRD+KP+NIL+ + +K+ DFG + NT + I GT Y+APE++R Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVLR-GTY 199
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM------SPNFKSFL 233
+ D+WS GVILY L G PPFY + Y +++ + + KY ++ S + K +
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV--ETGKYAFDLPQWRTISDDAKDLI 257
Query: 234 KGLLNKVPQNRLTWSALLEHPFVKETSDE 262
+ +L P R+T + LEHP++++ S E
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 152/269 (56%), Gaps = 14/269 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y+++ ++G+GSFG+V K + + T Q A+K I K KD + +E+E+L+KL H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 64 NIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+++ + E F +V E + GELF+ + K E I KQ+ + Y+H +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 123 IIHRDMKPQNILIGAGSV---VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I+HRD+KP+NIL+ + +K+ DFG + NT + I GT Y+APE++R Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVLR-GTY 199
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM------SPNFKSFL 233
+ D+WS GVILY L G PPFY + Y +++ + + KY ++ S + K +
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV--ETGKYAFDLPQWRTISDDAKDLI 257
Query: 234 KGLLNKVPQNRLTWSALLEHPFVKETSDE 262
+ +L P R+T + LEHP++++ S E
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 162 bits (411), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 147/260 (56%), Gaps = 4/260 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLK 61
++++ + +G+G FG VY R K +A+K + K ++ + H LR+EIEI L+
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 62 HQNIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H NI+ M + F + ++ EFA +GEL++ L+ E++ + ++L ALHY H
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 133
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
++IHRD+KP+N+L+G +K+ DFG++ + A ++ R + GT Y+ PE++ + ++
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
DLW GV+ YE VG PPF + S R IV +K+P +S K + LL
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 251
Query: 241 PQNRLTWSALLEHPFVKETS 260
P RL ++EHP+VK S
Sbjct: 252 PPQRLPLKGVMEHPWVKANS 271
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 162 bits (410), Expect = 1e-39, Method: Composition-based stats.
Identities = 81/245 (33%), Positives = 138/245 (56%), Gaps = 2/245 (0%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD-IHNLRQEIEILRKLK 61
+ ++ ++L+G+G+FGKV R K TG+ AMK + K KD + + E +L+ +
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H + + +F++ C V E+A G ELF L ++ EE+ + ++V AL YLHS
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+++RD+K +N+++ +K+ DFG + ++ ++ GTP Y+APE++ + Y
Sbjct: 129 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D W LGV++YE+ G+ PFY L I+ + +++P +SP KS L GLL K
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKD 248
Query: 241 PQNRL 245
P+ RL
Sbjct: 249 PKQRL 253
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 162 bits (410), Expect = 1e-39, Method: Composition-based stats.
Identities = 81/245 (33%), Positives = 138/245 (56%), Gaps = 2/245 (0%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD-IHNLRQEIEILRKLK 61
+ ++ ++L+G+G+FGKV R K TG+ AMK + K KD + + E +L+ +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H + + +F++ C V E+A G ELF L ++ EE+ + ++V AL YLHS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+++RD+K +N+++ +K+ DFG + ++ ++ GTP Y+APE++ + Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D W LGV++YE+ G+ PFY L I+ + +++P +SP KS L GLL K
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKD 243
Query: 241 PQNRL 245
P+ RL
Sbjct: 244 PKQRL 248
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 156/292 (53%), Gaps = 11/292 (3%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+ E +G G+F +V K TG+ A+K I K K+ ++ EI +LRK+KH+NI
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENI 82
Query: 66 IEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ + D +ESP +V + + GELF+ + + E+ ++ +Q++ A++YLH I+
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIV 142
Query: 125 HRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
HRD+KP+N+L S + + DFG ++ M V+ + GTP Y+APE++ ++PY+
Sbjct: 143 HRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGYVAPEVLAQKPYSK 201
Query: 182 TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVK----YPDEMSPNFKSFLKGLL 237
D WS+GVI Y L G PPFY + L I+K + Y D++S + K F++ L+
Sbjct: 202 AVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLM 261
Query: 238 NKVPQNRLTWSALLEHPFVK-ETSDELNAWELRATSVEARGCNATWTAEGNA 288
K P R T HP++ +T+ N E + + + W NA
Sbjct: 262 EKDPNKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNFAKSKWRQAFNA 313
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 143/258 (55%), Gaps = 7/258 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD-IHNLRQEIEILRKLKHQ 63
++ ++L+G+G+FGKV R K TG+ AMK + K KD + + E +L+ +H
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
+ + +F++ C V E+A G ELF L ++ EE+ + ++V AL YLHS
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 128
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHT 182
+++RD+K +N+++ +K+ DFG + ++ +++ GTP Y+APE++ + Y
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 188
Query: 183 ADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQ 242
D W LGV++YE+ G+ PFY L I+ + +++P +SP KS L GLL K P+
Sbjct: 189 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPK 248
Query: 243 NRL-----TWSALLEHPF 255
RL ++EH F
Sbjct: 249 QRLGGGPSDAKEVMEHRF 266
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 159 bits (403), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 9/261 (3%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+NY V E +G+G+F V + K TG A K I S +D L +E I RKL+H
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 64 NIIEMLDSF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+ + DS E + V GELFE + + E +Q++ ++ Y HSN
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 148
Query: 123 IIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I+HR++KP+N+L+ + G+ VKL DFG A ++ ++ GTP Y++PE++++ PY
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPY 207
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLKG 235
+ D+W+ GVILY L VG PPF+ + L I YP D ++P KS +
Sbjct: 208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 267
Query: 236 LLNKVPQNRLTWSALLEHPFV 256
+L P+ R+T L+ P++
Sbjct: 268 MLTVNPKKRITADQALKVPWI 288
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 159 bits (403), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 143/258 (55%), Gaps = 7/258 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD-IHNLRQEIEILRKLKHQ 63
++ ++L+G+G+FGKV R K TG+ AMK + K KD + + E +L+ +H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
+ + +F++ C V E+A G ELF L ++ EE+ + ++V AL YLHS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHT 182
+++RD+K +N+++ +K+ DFG + ++ +++ GTP Y+APE++ + Y
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 183 ADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQ 242
D W LGV++YE+ G+ PFY L I+ + +++P +SP KS L GLL K P+
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPK 245
Query: 243 NRL-----TWSALLEHPF 255
RL ++EH F
Sbjct: 246 QRLGGGPSDAKEVMEHRF 263
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 159 bits (403), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 150/270 (55%), Gaps = 14/270 (5%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIE----I 56
M ++Y + E +G G F V K R+K TG+ A KFI K S R+EIE I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 57 LRKLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRAL 115
LR+++H NII + D FE+ + ++ E + GELF+ L + + L E++ KQ++ +
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
HYLHS RI H D+KP+NI++ +V +KL DFG A + A ++I GTP ++AP
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-EFKNIFGTPEFVAP 180
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF-- 229
E+V +P AD+WS+GVI Y L G PF + + +I + +E N
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 240
Query: 230 --KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+T + LEH ++K
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 143/258 (55%), Gaps = 7/258 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD-IHNLRQEIEILRKLKHQ 63
++ ++L+G+G+FGKV R K TG+ AMK + K KD + + E +L+ +H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
+ + +F++ C V E+A G ELF L ++ EE+ + ++V AL YLHS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHT 182
+++RD+K +N+++ +K+ DFG + ++ +++ GTP Y+APE++ + Y
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 183 ADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQ 242
D W LGV++YE+ G+ PFY L I+ + +++P +SP KS L GLL K P+
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPK 245
Query: 243 NRL-----TWSALLEHPF 255
RL ++EH F
Sbjct: 246 QRLGGGPSDAKEVMEHRF 263
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 159 bits (402), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 139/266 (52%), Gaps = 8/266 (3%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ Y + E +G+G+F V + + TGQ A K I S +D L +E I R LKH
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 63 QNIIEMLDSF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+ + DS E + V GELFE + + E +Q++ ++++ H N
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 122 RIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
I+HRD+KP+N+L+ + G+ VKL DFG A + + GTP Y++PE++R+ P
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLK 234
Y D+W+ GVILY L VG PPF+ + L + I +P D ++P K +
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 235 GLLNKVPQNRLTWSALLEHPFVKETS 260
+L P R+T S L+HP++ + S
Sbjct: 243 KMLTINPAKRITASEALKHPWICQRS 268
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 9/261 (3%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+NY V E +G+G+F V + K TG A K I S +D L +E I RKL+H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 64 NIIEMLDSF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+ + DS E + V GELFE + + E +Q++ ++ Y HSN
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 123 IIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I+HR++KP+N+L+ + G+ VKL DFG A ++ ++ GTP Y++PE++++ PY
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLKG 235
+ D+W+ GVILY L VG PPF+ + L I YP D ++P KS +
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 244
Query: 236 LLNKVPQNRLTWSALLEHPFV 256
+L P+ R+T L+ P++
Sbjct: 245 MLTVNPKKRITADQALKVPWI 265
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 139/266 (52%), Gaps = 8/266 (3%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ Y + E +G+G+F V + + TGQ A K I S +D L +E I R LKH
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 63 QNIIEMLDSF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+ + DS E + V GELFE + + E +Q++ ++++ H N
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 122 RIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
I+HRD+KP+N+L+ + G+ VKL DFG A + + GTP Y++PE++R+ P
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLK 234
Y D+W+ GVILY L VG PPF+ + L + I +P D ++P K +
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 235 GLLNKVPQNRLTWSALLEHPFVKETS 260
+L P R+T S L+HP++ + S
Sbjct: 243 KMLTINPAKRITASEALKHPWICQRS 268
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 142/258 (55%), Gaps = 7/258 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD-IHNLRQEIEILRKLKHQ 63
++ ++L+G+G+FGKV R K TG+ AMK + K KD + + E +L+ +H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
+ + +F++ C V E+A G ELF L ++ EE+ + ++V AL YLHS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHT 182
+++RD+K +N+++ +K+ DFG + ++ ++ GTP Y+APE++ + Y
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 183 ADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQ 242
D W LGV++YE+ G+ PFY L I+ + +++P +SP KS L GLL K P+
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPK 245
Query: 243 NRL-----TWSALLEHPF 255
RL ++EH F
Sbjct: 246 QRLGGGPSDAKEVMEHRF 263
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 142/258 (55%), Gaps = 7/258 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD-IHNLRQEIEILRKLKHQ 63
++ ++L+G+G+FGKV R K TG+ AMK + K KD + + E +L+ +H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
+ + +F++ C V E+A G ELF L ++ EE+ + ++V AL YLHS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHT 182
+++RD+K +N+++ +K+ DFG + ++ ++ GTP Y+APE++ + Y
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 183 ADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQ 242
D W LGV++YE+ G+ PFY L I+ + +++P +SP KS L GLL K P+
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPK 245
Query: 243 NRL-----TWSALLEHPF 255
RL ++EH F
Sbjct: 246 QRLGGGPSDAKEVMEHRF 263
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 9/261 (3%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+NY V E +G+G+F V + K TG A K I S +D L +E I RKL+H
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 64 NIIEMLDSF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+ + DS E + V GELFE + + E +Q++ ++ Y HSN
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 123 IIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I+HR++KP+N+L+ + G+ VKL DFG A ++ ++ GTP Y++PE++++ PY
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPY 183
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLKG 235
+ D+W+ GVILY L VG PPF+ + L I YP D ++P KS +
Sbjct: 184 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 243
Query: 236 LLNKVPQNRLTWSALLEHPFV 256
+L P+ R+T L+ P++
Sbjct: 244 MLTVNPKKRITADQALKVPWI 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 9/261 (3%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+NY V E +G+G+F V + K TG A K I S +D L +E I RKL+H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 64 NIIEMLDSF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+ + DS E + V GELFE + + E +Q++ ++ Y HSN
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 123 IIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I+HR++KP+N+L+ + G+ VKL DFG A ++ ++ GTP Y++PE++++ PY
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLKG 235
+ D+W+ GVILY L VG PPF+ + L I YP D ++P KS +
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 244
Query: 236 LLNKVPQNRLTWSALLEHPFV 256
+L P+ R+T L+ P++
Sbjct: 245 MLTVNPKKRITADQALKVPWI 265
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 144/259 (55%), Gaps = 9/259 (3%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E + V+E +GEGS+G VYK K TGQ VA+K + E D+ + +EI I+++
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV----PVESDLQEIIKEISIMQQCDSP 84
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGELFEILE-DDKCLPEEQVQSIAKQLVRALHYLHSN 121
++++ S+ + +V E+ G + +I+ +K L E+++ +I + ++ L YLH
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
R IHRD+K NIL+ KL DFG A ++ + GTP +MAPE+++E YN
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC 204
Query: 182 TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDP---VKYPDEMSPNFKSFLKGLLN 238
AD+WSLG+ E+ G+PP+ I I +P + P+ S NF F+K L
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLV 264
Query: 239 KVPQNRLTWSALLEHPFVK 257
K P+ R T + LL+HPFV+
Sbjct: 265 KSPEQRATATQLLQHPFVR 283
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 150/270 (55%), Gaps = 20/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEI 56
++Y + E +G G F V K R+K TG+ A KFI K G S ++I +E+ I
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE---REVNI 82
Query: 57 LRKLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRAL 115
LR+++H NII + D FE+ + ++ E + GELF+ L + + L E++ KQ++ +
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
HYLHS RI H D+KP+NI++ +V +KL DFG A + A ++I GTP ++AP
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-EFKNIFGTPEFVAP 201
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF-- 229
E+V +P AD+WS+GVI Y L G PF + + +I + +E N
Sbjct: 202 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 261
Query: 230 --KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+ + LEH ++K
Sbjct: 262 LAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 148/267 (55%), Gaps = 14/267 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIE----ILRK 59
++Y + E +G G F V K R+K TG+ A KFI K S R+EIE ILR+
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYL 118
++H NII + D FE+ + ++ E + GELF+ L + + L E++ KQ++ +HYL
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 119 HSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV 174
HS RI H D+KP+NI++ +V +KL DFG A + A ++I GTP ++APE+V
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-EFKNIFGTPEFVAPEIV 190
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF----K 230
+P AD+WS+GVI Y L G PF + + +I + +E N K
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 250
Query: 231 SFLKGLLNKVPQNRLTWSALLEHPFVK 257
F++ LL K P+ R+ + LEH ++K
Sbjct: 251 DFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 143/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A +GE+++ L+ E++ + +L AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEGRMH 188
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 248
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 249 NPSQRPMLREVLEHPWITANS 269
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 156 bits (395), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 144/261 (55%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A +GE+++ L+ E++ + +L AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 248
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 249 NPSQRPMLREVLEHPWITANS 269
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 138/266 (51%), Gaps = 8/266 (3%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++Y + E +G+G+F V + +K Q A K I S +D L +E I R LKH
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 63 QNIIEMLDSF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+ + DS E + V GELFE + + E Q++ +++++H +
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 122 RIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
I+HRD+KP+N+L+ + G+ VKL DFG A + GTP Y++PE++R+ P
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLK 234
Y D+W+ GVILY L VG PPF+ + L + I +P D ++P K+ +
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 269
Query: 235 GLLNKVPQNRLTWSALLEHPFVKETS 260
+L P R+T L+HP+V + S
Sbjct: 270 QMLTINPAKRITADQALKHPWVCQRS 295
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 137/274 (50%), Gaps = 14/274 (5%)
Query: 1 MGVEN------YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEI 54
+G EN Y + E +G+G+F V + + GQ A K I S +D L +E
Sbjct: 13 LGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREA 72
Query: 55 EILRKLKHQNIIEMLDSF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVR 113
I R LKH NI+ + DS E + + GELFE + + E +Q++
Sbjct: 73 RICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE 132
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ + H ++HRD+KP+N+L+ + G+ VKL DFG A + GTP Y++
Sbjct: 133 AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 192
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMS 226
PE++R+ PY DLW+ GVILY L VG PPF+ + L + I +P D ++
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT 252
Query: 227 PNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
P K + +L P R+T + L+HP++ S
Sbjct: 253 PEAKDLINKMLTINPSKRITAAEALKHPWISHRS 286
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 154 bits (389), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 144/257 (56%), Gaps = 5/257 (1%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y E +G+G+ G VY TGQ VA++ + + +K++ + EI ++R+ K+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 77
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
NI+ LDS+ E VV E+ G + + C+ E Q+ ++ ++ ++AL +LHSN++
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
IHRD+K NIL+G VKL DFGF ++ ++ GTP +MAPE+V + Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD---PVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLG++ E+ G+PP+ + + I + ++ P+++S F+ FL L+
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMD 257
Query: 241 PQNRLTWSALLEHPFVK 257
+ R + LL+H F+K
Sbjct: 258 VEKRGSAKELLQHQFLK 274
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 154 bits (389), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 143/260 (55%), Gaps = 4/260 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLK 61
+E++ + +G+G FG VY R + + +A+K + K + + H LR+E+EI L+
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y HS
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + ++
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
DLWSLGV+ YE VG PPF ++ R I + +PD ++ + + LL
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 241 PQNRLTWSALLEHPFVKETS 260
RLT + +LEHP++K S
Sbjct: 249 ASQRLTLAEVLEHPWIKANS 268
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 154 bits (388), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 143/260 (55%), Gaps = 4/260 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLK 61
+E++ + +G+G FG VY R + + +A+K + K + + H LR+E+EI L+
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y HS
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + ++
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHD 188
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
DLWSLGV+ YE VG PPF ++ R I + +PD ++ + + LL
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 241 PQNRLTWSALLEHPFVKETS 260
RLT + +LEHP++K S
Sbjct: 249 ASQRLTLAEVLEHPWIKANS 268
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 143/257 (55%), Gaps = 5/257 (1%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y E +G+G+ G VY TGQ VA++ + + +K++ + EI ++R+ K+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 77
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
NI+ LDS+ E VV E+ G + + C+ E Q+ ++ ++ ++AL +LHSN++
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
IHRD+K NIL+G VKL DFGF ++ + GTP +MAPE+V + Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD---PVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLG++ E+ G+PP+ + + I + ++ P+++S F+ FL L+
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMD 257
Query: 241 PQNRLTWSALLEHPFVK 257
+ R + LL+H F+K
Sbjct: 258 VEKRGSAKELLQHQFLK 274
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 153 bits (386), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 142/263 (53%), Gaps = 4/263 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMH 186
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 246
Query: 240 VPQNRLTWSALLEHPFVKETSDE 262
P R +LEHP++ S +
Sbjct: 247 NPSQRPMLREVLEHPWITANSSK 269
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 153 bits (386), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 6/262 (2%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFA-RAMSANTVVLRSIKGTPLYMAPELVREQP 178
S R+IHRD+KP+N+L+G+ +K+ DFG++ A S+ L GT Y+ PE++ +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTL---SGTLDYLPPEMIEGRM 183
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLN 238
++ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 243
Query: 239 KVPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 244 HNPSQRPMLREVLEHPWITANS 265
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 153 bits (386), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 248
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 249 NPSQRPMLREVLEHPWITANS 269
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 152 bits (385), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 142/263 (53%), Gaps = 4/263 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 247
Query: 240 VPQNRLTWSALLEHPFVKETSDE 262
P R +LEHP++ S +
Sbjct: 248 NPSQRPMLREVLEHPWITANSSK 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 152 bits (385), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 183
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 243
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 244 NPSQRPMLREVLEHPWITANS 264
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 152 bits (385), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 144/257 (56%), Gaps = 3/257 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLK 61
+ NY +++ +GEGSFGKV TGQ VA+K I K ++ D+ + +EI LR L+
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
H +II++ D +S E +V E+A ELF+ + + E++ + +Q++ A+ Y H +
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY-N 180
+I+HRD+KP+N+L+ VK+ DFG + M+ L++ G+P Y APE++ + Y
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLYAG 190
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WS GVILY + + PF S+ L ++I P +SP +K +L
Sbjct: 191 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 250
Query: 241 PQNRLTWSALLEHPFVK 257
P NR++ +++ + K
Sbjct: 251 PLNRISIHEIMQDDWFK 267
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 152 bits (385), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 144/252 (57%), Gaps = 3/252 (1%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIH-NLRQEIEILRKLKHQN 64
Y + E +GEGSFGKV T Q VA+KFI + + D+H + +EI L+ L+H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 65 IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
II++ D +P + +V E+A GELF+ + + K + E++ + +Q++ A+ Y H ++I+
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIV 130
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY-NHTA 183
HRD+KP+N+L+ VK+ DFG + M+ L++ G+P Y APE++ + Y
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQN 243
D+WS G++LY + VG+ PF + L + + PD +SP +S ++ ++ P
Sbjct: 190 DVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQ 249
Query: 244 RLTWSALLEHPF 255
R+T + P+
Sbjct: 250 RITIQEIRRDPW 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 152 bits (385), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 246
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 247 NPSQRPMLREVLEHPWITANS 267
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 152 bits (385), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMH 184
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 244
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 245 NPSQRPMLREVLEHPWITANS 265
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 152 bits (385), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 142/257 (55%), Gaps = 5/257 (1%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y E +G+G+ G VY TGQ VA++ + + +K++ + EI ++R+ K+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 77
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
NI+ LDS+ E VV E+ G + + C+ E Q+ ++ ++ ++AL +LHSN++
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
IHRD+K NIL+G VKL DFGF ++ + GTP +MAPE+V + Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD---PVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLG++ E+ G+PP+ + + I + ++ P+++S F+ FL L
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMD 257
Query: 241 PQNRLTWSALLEHPFVK 257
+ R + LL+H F+K
Sbjct: 258 VEKRGSAKELLQHQFLK 274
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 152 bits (385), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 243
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 244 NPSQRPMLREVLEHPWITANS 264
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 154/284 (54%), Gaps = 21/284 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPAFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAWELRATSV 273
K F++ LL K P+ R+T L+HP++K D A +A++V
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK-PKDTQQALSRKASAV 291
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 144/257 (56%), Gaps = 3/257 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLK 61
+ NY +++ +GEGSFGKV TGQ VA+K I K ++ D+ + +EI LR L+
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
H +II++ D +S E +V E+A ELF+ + + E++ + +Q++ A+ Y H +
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY-N 180
+I+HRD+KP+N+L+ VK+ DFG + M+ L++ G+P Y APE++ + Y
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLYAG 191
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WS GVILY + + PF S+ L ++I P +SP +K +L
Sbjct: 192 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 251
Query: 241 PQNRLTWSALLEHPFVK 257
P NR++ +++ + K
Sbjct: 252 PLNRISIHEIMQDDWFK 268
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMH 188
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 248
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 249 NPSQRPMLREVLEHPWITANS 269
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 243
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 244 NPSQRPMLREVLEHPWITANS 264
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 244
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 245 NPSQRPMLREVLEHPWITANS 265
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 246
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 247 NPSQRPMLREVLEHPWITANS 267
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE + + +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXH 188
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 248
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 249 NPSQRPXLREVLEHPWITANS 269
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 182
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 242
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 243 NPSQRPMLREVLEHPWITANS 263
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 200
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 260
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 261 NPSQRPMLREVLEHPWITANS 281
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 152 bits (383), Expect = 1e-36, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 143/272 (52%), Gaps = 15/272 (5%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++++ ++ +G GSFG+V+ R ++ G+ AMK + K K + + E +L +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H II M +F+ Q+ ++ ++ +G ELF +L + P + A ++ AL YLHS
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
II+RD+KP+NIL+ +K+ DFGFA+ + T L GTP Y+APE+V +PYN
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL---CGTPDYIAPEVVSTKPYN 181
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
+ D WS G+++YE+ G PFY ++ I+ +++P + + K L L+ +
Sbjct: 182 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRD 241
Query: 241 PQNRL-----TWSALLEHPFVKETSDELNAWE 267
RL + HP+ KE WE
Sbjct: 242 LSQRLGNLQNGTEDVKNHPWFKEV-----VWE 268
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEGRMH 183
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 243
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 244 NPSQRPMLREVLEHPWITANS 264
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 245
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 246 NPSQRPMLREVLEHPWITANS 266
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 154/284 (54%), Gaps = 21/284 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAWELRATSV 273
K F++ LL K P+ R+T L+HP++K D A +A++V
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK-PKDTQQALSRKASAV 291
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 140/244 (57%), Gaps = 3/244 (1%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHG--KSEKDIHNLRQEIEILRKLKH 62
++H ++++G+GSFGKV R K A+K + K K +++ H + + +L+ +KH
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
++ + SF++ + V ++ G ELF L+ ++C E + + A ++ AL YLHS
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
I++RD+KP+NIL+ + + L DFG + + + GTP Y+APE++ +QPY+
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDR 218
Query: 182 TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVP 241
T D W LG +LYE+ G PPFY+ + + +I+ P++ ++ + + L+GLL K
Sbjct: 219 TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDR 278
Query: 242 QNRL 245
RL
Sbjct: 279 TKRL 282
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 144/257 (56%), Gaps = 3/257 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLK 61
+ NY +++ +GEGSFGKV TGQ VA+K I K ++ D+ + +EI LR L+
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
H +II++ D +S E +V E+A ELF+ + + E++ + +Q++ A+ Y H +
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY-N 180
+I+HRD+KP+N+L+ VK+ DFG + M+ L++ G+P Y APE++ + Y
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLYAG 185
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WS GVILY + + PF S+ L ++I P +SP +K +L
Sbjct: 186 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 245
Query: 241 PQNRLTWSALLEHPFVK 257
P NR++ +++ + K
Sbjct: 246 PLNRISIHEIMQDDWFK 262
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 148/256 (57%), Gaps = 12/256 (4%)
Query: 9 IELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+E++G G+F +V+ +++ TG+ A+K I K + +D +L EI +L+K+KH+NI+ +
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCI-KKSPAFRD-SSLENEIAVLKKIKHENIVTL 71
Query: 69 LDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
D +ES + +V + G ELF+ + + E+ + +Q++ A+ YLH N I+HRD
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 128 MKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTAD 184
+KP+N+L S + + DFG ++ M N + + + GTP Y+APE++ ++PY+ D
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSK-MEQNGI-MSTACGTPGYVAPEVLAQKPYSKAVD 189
Query: 185 LWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLKGLLNKV 240
WS+GVI Y L G PPFY + L I + ++ D++S + K F+ LL K
Sbjct: 190 CWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKD 249
Query: 241 PQNRLTWSALLEHPFV 256
P R T L HP++
Sbjct: 250 PNERYTCEKALSHPWI 265
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 144/257 (56%), Gaps = 3/257 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLK 61
+ NY +++ +GEGSFGKV TGQ VA+K I K ++ D+ + +EI LR L+
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
H +II++ D +S E +V E+A ELF+ + + E++ + +Q++ A+ Y H +
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY-N 180
+I+HRD+KP+N+L+ VK+ DFG + M+ L++ G+P Y APE++ + Y
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLYAG 181
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WS GVILY + + PF S+ L ++I P +SP +K +L
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 241
Query: 241 PQNRLTWSALLEHPFVK 257
P NR++ +++ + K
Sbjct: 242 PLNRISIHEIMQDDWFK 258
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 243
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 244 NPSQRPMLREVLEHPWITANS 264
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMH 186
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 246
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 247 NPSQRPMLREVLEHPWITANS 267
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 142/257 (55%), Gaps = 5/257 (1%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y E +G+G+ G VY TGQ VA++ + + +K++ + EI ++R+ K+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 78
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
NI+ LDS+ E VV E+ G + + C+ E Q+ ++ ++ ++AL +LHSN++
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
IHRD+K NIL+G VKL DFGF ++ + GTP +MAPE+V + Y
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD---PVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLG++ E+ G+PP+ + + I + ++ P+++S F+ FL L
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMD 258
Query: 241 PQNRLTWSALLEHPFVK 257
+ R + L++H F+K
Sbjct: 259 VEKRGSAKELIQHQFLK 275
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 209
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 269
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 270 NPSQRPMLREVLEHPWITANS 290
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 136/245 (55%), Gaps = 5/245 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD--IHNLRQEIEILRKLKH 62
+ ++L+G+G+FGKV + K TG+ AMK + K KD H L E +L+ +H
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVLQNSRH 207
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+ + SF++ C V E+A G ELF L ++ E++ + ++V AL YLHS
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 267
Query: 122 R-IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+ +++RD+K +N+++ +K+ DFG + + +++ GTP Y+APE++ + Y
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYG 327
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D W LGV++YE+ G+ PFY L I+ + +++P + P KS L GLL K
Sbjct: 328 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKD 387
Query: 241 PQNRL 245
P+ RL
Sbjct: 388 PKQRL 392
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMH 186
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 246
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 247 NPSQRPMLREVLEHPWITANS 267
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMH 183
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 243
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 244 NPSQRPMLREVLEHPWITANS 264
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 243
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 244 NPSQRPMLREVLEHPWITANS 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K +A+K + K + + H LR+E+EI L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 240
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 241 NPSQRPMLREVLEHPWITANS 261
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 136/249 (54%), Gaps = 5/249 (2%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+GEGS G V K+TG+ VA+K + + +++ L E+ I+R H N+++M S
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRREL--LFNEVVIMRDYHHDNVVDMYSS 110
Query: 72 FESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQ 131
+ E VV EF +G + + EEQ+ ++ ++RAL YLH+ +IHRD+K
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 132 NILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVI 191
+IL+ + +KL DFGF +S + + GTP +MAPE++ PY D+WSLG++
Sbjct: 171 SILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIM 230
Query: 192 LYELFVGQPPFYTNSVYALIRHI---VKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLTWS 248
+ E+ G+PP++ +R I + VK ++S + FL +L + P R T
Sbjct: 231 VIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQ 290
Query: 249 ALLEHPFVK 257
LL HPF+K
Sbjct: 291 ELLGHPFLK 299
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 136/245 (55%), Gaps = 5/245 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD--IHNLRQEIEILRKLKH 62
+ ++L+G+G+FGKV + K TG+ AMK + K KD H L E +L+ +H
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVLQNSRH 210
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+ + SF++ C V E+A G ELF L ++ E++ + ++V AL YLHS
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 270
Query: 122 R-IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+ +++RD+K +N+++ +K+ DFG + + +++ GTP Y+APE++ + Y
Sbjct: 271 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYG 330
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D W LGV++YE+ G+ PFY L I+ + +++P + P KS L GLL K
Sbjct: 331 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKD 390
Query: 241 PQNRL 245
P+ RL
Sbjct: 391 PKQRL 395
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 149/260 (57%), Gaps = 4/260 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLK 61
++++ + +G+G FG VY R K + VA+K + K ++ + H LR+EIEI L
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 62 HQNIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H NI+ + + F + ++ E+A +GEL++ L+ E++ +I ++L AL Y H
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
++IHRD+KP+N+L+G +K+ DFG++ + A ++ +++ GT Y+ PE++ + +N
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRMHN 199
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
DLW +GV+ YEL VG PPF + S R IVK +K+P + + + LL
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHN 259
Query: 241 PQNRLTWSALLEHPFVKETS 260
P RL + + HP+V+ S
Sbjct: 260 PSERLPLAQVSAHPWVRANS 279
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 8/266 (3%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
E Y + E +G+G+F V + + GQ A I S +D L +E I R LKH
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 63 QNIIEMLDSF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+ + DS E + + GELFE + + E +Q++ A+ + H
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 129
Query: 122 RIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
++HR++KP+N+L+ + G+ VKL DFG A + GTP Y++PE++R+ P
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 189
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLK 234
Y DLW+ GVILY L VG PPF+ + L + I +P D ++P K +
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249
Query: 235 GLLNKVPQNRLTWSALLEHPFVKETS 260
+L P R+T + L+HP++ S
Sbjct: 250 KMLTINPSKRITAAEALKHPWISHRS 275
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 135/245 (55%), Gaps = 5/245 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD--IHNLRQEIEILRKLKH 62
+ ++L+G+G+FGKV + K TG+ AMK + K KD H L E +L+ +H
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVLQNSRH 68
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+ + SF++ C V E+A G ELF L ++ E++ + ++V AL YLHS
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 128
Query: 122 R-IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+ +++RD+K +N+++ +K+ DFG + + ++ GTP Y+APE++ + Y
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D W LGV++YE+ G+ PFY L I+ + +++P + P KS L GLL K
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKD 248
Query: 241 PQNRL 245
P+ RL
Sbjct: 249 PKQRL 253
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ DFG++ + A + + GT Y+ PE++ + +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMH 209
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 269
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 270 NPSQRPMLREVLEHPWITANS 290
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 135/245 (55%), Gaps = 5/245 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD--IHNLRQEIEILRKLKH 62
+ ++L+G+G+FGKV + K TG+ AMK + K KD H L E +L+ +H
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVLQNSRH 67
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+ + SF++ C V E+A G ELF L ++ E++ + ++V AL YLHS
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 127
Query: 122 R-IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+ +++RD+K +N+++ +K+ DFG + + ++ GTP Y+APE++ + Y
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYG 187
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D W LGV++YE+ G+ PFY L I+ + +++P + P KS L GLL K
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKD 247
Query: 241 PQNRL 245
P+ RL
Sbjct: 248 PKQRL 252
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+GEGS G V + +G+ VA+K + + +++ L E+ I+R +H+N++EM +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 89
Query: 72 FESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQ 131
+ E VV EF +G + + EEQ+ ++ +++AL LH+ +IHRD+K
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 149
Query: 132 NILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVI 191
+IL+ VKL DFGF +S + + GTP +MAPEL+ PY D+WSLG++
Sbjct: 150 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 209
Query: 192 LYELFVGQPPFYTN---SVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLTWS 248
+ E+ G+PP++ +IR + +K ++SP+ K FL LL + P R T +
Sbjct: 210 VIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA 269
Query: 249 ALLEHPFV 256
LL+HPF+
Sbjct: 270 ELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+GEGS G V + +G+ VA+K + + +++ L E+ I+R +H+N++EM +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 85
Query: 72 FESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQ 131
+ E VV EF +G + + EEQ+ ++ +++AL LH+ +IHRD+K
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 145
Query: 132 NILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVI 191
+IL+ VKL DFGF +S + + GTP +MAPEL+ PY D+WSLG++
Sbjct: 146 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 205
Query: 192 LYELFVGQPPFYTN---SVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLTWS 248
+ E+ G+PP++ +IR + +K ++SP+ K FL LL + P R T +
Sbjct: 206 VIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA 265
Query: 249 ALLEHPFV 256
LL+HPF+
Sbjct: 266 ELLKHPFL 273
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ +FG++ + A + ++ GT Y+ PE++ + +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 185
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 245
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 246 NPSQRPMLREVLEHPWITANS 266
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 135/245 (55%), Gaps = 5/245 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD--IHNLRQEIEILRKLKH 62
+ ++L+G+G+FGKV + K TG+ AMK + K KD H L E +L+ +H
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVLQNSRH 69
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+ + SF++ C V E+A G ELF L ++ E++ + ++V AL YLHS
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 129
Query: 122 R-IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+ +++RD+K +N+++ +K+ DFG + + ++ GTP Y+APE++ + Y
Sbjct: 130 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYG 189
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D W LGV++YE+ G+ PFY L I+ + +++P + P KS L GLL K
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKD 249
Query: 241 PQNRL 245
P+ RL
Sbjct: 250 PKQRL 254
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 154/284 (54%), Gaps = 21/284 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAWELRATSV 273
K F++ LL K P+ R+T L+HP++K D A +A++V
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK-PKDTQQALSRKASAV 291
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 136/266 (51%), Gaps = 8/266 (3%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ Y + E +G+G+F V + + TG A K I S +D L +E I R LKH
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 63 QNIIEMLDSF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+ + DS E + V GELFE + + E +Q++ A+ + H
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 122 RIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
++HRD+KP+N+L+ + G+ VKL DFG A + + GTP Y++PE++R++
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEA 182
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLK 234
Y D+W+ GVILY L VG PPF+ + L + I +P D ++P K+ +
Sbjct: 183 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 242
Query: 235 GLLNKVPQNRLTWSALLEHPFVKETS 260
+L P R+T L+HP+V + S
Sbjct: 243 QMLTINPAKRITAHEALKHPWVCQRS 268
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 154/284 (54%), Gaps = 21/284 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAWELRATSV 273
K F++ LL K P+ R+T L+HP++K D A +A++V
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK-PKDTQQALSRKASAV 291
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 143/257 (55%), Gaps = 5/257 (1%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y E +G+G+ G VY TGQ VA++ + + +K++ + EI ++R+ K+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 78
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
NI+ LDS+ E VV E+ G + + C+ E Q+ ++ ++ ++AL +LHSN++
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
IHR++K NIL+G VKL DFGF ++ ++ GTP +MAPE+V + Y
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 198
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD---PVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLG++ E+ G+PP+ + + I + ++ P+++S F+ FL L
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMD 258
Query: 241 PQNRLTWSALLEHPFVK 257
+ R + L++H F+K
Sbjct: 259 VEKRGSAKELIQHQFLK 275
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 156/292 (53%), Gaps = 11/292 (3%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y +++G G+F +V K T + VA+K I K K+ ++ EI +L K+KH NI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNI 78
Query: 66 IEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ + D +ES ++ + + GELF+ + + E + Q++ A+ YLH I+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 125 HRDMKPQNIL---IGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
HRD+KP+N+L + S + + DFG ++ M VL + GTP Y+APE++ ++PY+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 182 TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVK----YPDEMSPNFKSFLKGLL 237
D WS+GVI Y L G PPFY + L I+K + Y D++S + K F++ L+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLM 257
Query: 238 NKVPQNRLTWSALLEHPFVK-ETSDELNAWELRATSVEARGCNATWTAEGNA 288
K P+ R T L+HP++ +T+ + N + + ++ + W NA
Sbjct: 258 EKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNA 309
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 156/292 (53%), Gaps = 11/292 (3%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y +++G G+F +V K T + VA+K I K K+ ++ EI +L K+KH NI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNI 78
Query: 66 IEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ + D +ES ++ + + GELF+ + + E + Q++ A+ YLH I+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 125 HRDMKPQNIL---IGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
HRD+KP+N+L + S + + DFG ++ M VL + GTP Y+APE++ ++PY+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 182 TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVK----YPDEMSPNFKSFLKGLL 237
D WS+GVI Y L G PPFY + L I+K + Y D++S + K F++ L+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLM 257
Query: 238 NKVPQNRLTWSALLEHPFVK-ETSDELNAWELRATSVEARGCNATWTAEGNA 288
K P+ R T L+HP++ +T+ + N + + ++ + W NA
Sbjct: 258 EKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNA 309
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 154/284 (54%), Gaps = 21/284 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAWELRATSV 273
K F++ LL K P+ R+T L+HP++K D A +A++V
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK-PKDTQQALSRKASAV 291
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S ++IHRD+KP+N+L+G+ +K+ DFG++ + A + ++ GT Y+ PE++ + +
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKH 243
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 244 NPSQRPMLREVLEHPWITANS 264
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+GEGS G V + +G+ VA+K + + +++ L E+ I+R +H+N++EM +S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 96
Query: 72 FESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQ 131
+ E VV EF +G + + EEQ+ ++ +++AL LH+ +IHRD+K
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 156
Query: 132 NILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVI 191
+IL+ VKL DFGF +S + + GTP +MAPEL+ PY D+WSLG++
Sbjct: 157 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 216
Query: 192 LYELFVGQPPFYTN---SVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLTWS 248
+ E+ G+PP++ +IR + +K ++SP+ K FL LL + P R T +
Sbjct: 217 VIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA 276
Query: 249 ALLEHPFV 256
LL+HPF+
Sbjct: 277 ELLKHPFL 284
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 141/261 (54%), Gaps = 4/261 (1%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKL 60
+E++ + +G+G FG VY R K + +A+K + K + + H LR+E+EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
+H NI+ + F ++ E+A G ++ L+ E++ + +L AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S R+IHRD+KP+N+L+G+ +K+ +FG++ + A + ++ GT Y+ PE++ + +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ DLWSLGV+ YE VG+PPF N+ + I + +PD ++ + + LL
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 246
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P R +LEHP++ S
Sbjct: 247 NPSQRPMLREVLEHPWITANS 267
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+GEGS G V + +G+ VA+K + + +++ L E+ I+R +H+N++EM +S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 94
Query: 72 FESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQ 131
+ E VV EF +G + + EEQ+ ++ +++AL LH+ +IHRD+K
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 154
Query: 132 NILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVI 191
+IL+ VKL DFGF +S + + GTP +MAPEL+ PY D+WSLG++
Sbjct: 155 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 214
Query: 192 LYELFVGQPPFYTN---SVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLTWS 248
+ E+ G+PP++ +IR + +K ++SP+ K FL LL + P R T +
Sbjct: 215 VIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA 274
Query: 249 ALLEHPFV 256
LL+HPF+
Sbjct: 275 ELLKHPFL 282
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 156/292 (53%), Gaps = 11/292 (3%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y +++G G+F +V K T + VA+K I K K+ ++ EI +L K+KH NI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE-GSMENEIAVLHKIKHPNI 78
Query: 66 IEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ + D +ES ++ + + GELF+ + + E + Q++ A+ YLH I+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 125 HRDMKPQNIL---IGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
HRD+KP+N+L + S + + DFG ++ M VL + GTP Y+APE++ ++PY+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 182 TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVK----YPDEMSPNFKSFLKGLL 237
D WS+GVI Y L G PPFY + L I+K + Y D++S + K F++ L+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLM 257
Query: 238 NKVPQNRLTWSALLEHPFVK-ETSDELNAWELRATSVEARGCNATWTAEGNA 288
K P+ R T L+HP++ +T+ + N + + ++ + W NA
Sbjct: 258 EKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNA 309
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 149 bits (377), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+T L+HP++K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 149 bits (377), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 143/259 (55%), Gaps = 10/259 (3%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y +++G G+F +V K T + VA+K I K K+ ++ EI +L K+KH NI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNI 78
Query: 66 IEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ + D +ES ++ + + GELF+ + + E + Q++ A+ YLH I+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 125 HRDMKPQNIL---IGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
HRD+KP+N+L + S + + DFG ++ M VL + GTP Y+APE++ ++PY+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 182 TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVK----YPDEMSPNFKSFLKGLL 237
D WS+GVI Y L G PPFY + L I+K + Y D++S + K F++ L+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLM 257
Query: 238 NKVPQNRLTWSALLEHPFV 256
K P+ R T L+HP++
Sbjct: 258 EKDPEKRFTCEQALQHPWI 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 149 bits (376), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+T L+HP++K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 149 bits (376), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+T L+HP++K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 68
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 187
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+T L+HP++K
Sbjct: 248 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+T L+HP++K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+T L+HP++K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+T L+HP++K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 68
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 187
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+T L+HP++K
Sbjct: 248 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+GEGS G V + +G+ VA+K + + +++ L E+ I+R +H+N++EM +S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 139
Query: 72 FESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQ 131
+ E VV EF +G + + EEQ+ ++ +++AL LH+ +IHRD+K
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 199
Query: 132 NILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVI 191
+IL+ VKL DFGF +S + + GTP +MAPEL+ PY D+WSLG++
Sbjct: 200 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 259
Query: 192 LYELFVGQPPFYTN---SVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLTWS 248
+ E+ G+PP++ +IR + +K ++SP+ K FL LL + P R T +
Sbjct: 260 VIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA 319
Query: 249 ALLEHPFV 256
LL+HPF+
Sbjct: 320 ELLKHPFL 327
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEIEILR 58
Y E +G G F V K R K TG A KFI K G S +DI +E+ IL+
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---REVSILK 69
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+++H N+I + + +E+ + ++ E A GELF+ L + + L EE+ KQ++ ++Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
LHS +I H D+KP+NI++ +V +K+ DFG A + ++I GTP ++APE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEI 188
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNF---- 229
V +P AD+WS+GVI Y L G PF ++ + ++ ++ DE N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
K F++ LL K P+ R+T L+HP++K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 15/268 (5%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIE----IL 57
VE+++ I E +G G F V K R K TG A KFI K R+EIE IL
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALH 116
R++ H NII + D +E+ + ++ E G ELF+ L + L EE+ S KQ++ ++
Sbjct: 70 RQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 117 YLHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYMAPE 172
YLH+ +I H D+KP+NI++ ++ +KL DFG A + + V ++I GTP ++APE
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPE 188
Query: 173 LVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM----SPN 228
+V +P AD+WS+GVI Y L G PF ++ + +I + +E S
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 229 FKSFLKGLLNKVPQNRLTWSALLEHPFV 256
K F++ LL K + RLT L HP++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+GEGS G V + +G+ VA+K + + +++ L E+ I+R +H+N++EM +S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 216
Query: 72 FESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQ 131
+ E VV EF +G + + EEQ+ ++ +++AL LH+ +IHRD+K
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 276
Query: 132 NILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVI 191
+IL+ VKL DFGF +S + + GTP +MAPEL+ PY D+WSLG++
Sbjct: 277 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 336
Query: 192 LYELFVGQPPFYTN---SVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLTWS 248
+ E+ G+PP++ +IR + +K ++SP+ K FL LL + P R T +
Sbjct: 337 VIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA 396
Query: 249 ALLEHPFV 256
LL+HPF+
Sbjct: 397 ELLKHPFL 404
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 148/271 (54%), Gaps = 21/271 (7%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEI 54
VE+++ I E +G G F V K R K TG A KFI K G S ++I +E+
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---REV 66
Query: 55 EILRKLKHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVR 113
ILR++ H N+I + D +E+ + ++ E G ELF+ L + L EE+ S KQ++
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 114 ALHYLHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYM 169
++YLH+ +I H D+KP+NI++ ++ +KL DFG A + + V ++I GTP ++
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFV 185
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM---- 225
APE+V +P AD+WS+GVI Y L G PF ++ + +I + +E
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFV 256
S K F++ LL K + RLT L HP++
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 148/271 (54%), Gaps = 21/271 (7%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEI 54
VE+++ I E +G G F V K R K TG A KFI K G S ++I +E+
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---REV 66
Query: 55 EILRKLKHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVR 113
ILR++ H N+I + D +E+ + ++ E G ELF+ L + L EE+ S KQ++
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 114 ALHYLHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYM 169
++YLH+ +I H D+KP+NI++ ++ +KL DFG A + + V ++I GTP ++
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFV 185
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM---- 225
APE+V +P AD+WS+GVI Y L G PF ++ + +I + +E
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFV 256
S K F++ LL K + RLT L HP++
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 148/271 (54%), Gaps = 21/271 (7%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEI 54
VE+++ I E +G G F V K R K TG A KFI K G S ++I +E+
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---REV 66
Query: 55 EILRKLKHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVR 113
ILR++ H N+I + D +E+ + ++ E G ELF+ L + L EE+ S KQ++
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 114 ALHYLHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYM 169
++YLH+ +I H D+KP+NI++ ++ +KL DFG A + + V ++I GTP ++
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFV 185
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM---- 225
APE+V +P AD+WS+GVI Y L G PF ++ + +I + +E
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFV 256
S K F++ LL K + RLT L HP++
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 148/271 (54%), Gaps = 21/271 (7%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEI 54
VE+++ I E +G G F V K R K TG A KFI K G S ++I +E+
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEI---EREV 66
Query: 55 EILRKLKHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVR 113
ILR++ H N+I + D +E+ + ++ E G ELF+ L + L EE+ S KQ++
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 114 ALHYLHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYM 169
++YLH+ +I H D+KP+NI++ ++ +KL DFG A + + V ++I GTP ++
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFV 185
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM---- 225
APE+V +P AD+WS+GVI Y L G PF ++ + +I + +E
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFV 256
S K F++ LL K + RLT L HP++
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 148/271 (54%), Gaps = 21/271 (7%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-------GKSEKDIHNLRQEI 54
VE+++ I E +G G F V K R K TG A KFI K G S ++I +E+
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---REV 66
Query: 55 EILRKLKHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVR 113
ILR++ H N+I + D +E+ + ++ E G ELF+ L + L EE+ S KQ++
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 114 ALHYLHSNRIIHRDMKPQNILIGAGSV----VKLCDFGFARAMSANTVVLRSIKGTPLYM 169
++YLH+ +I H D+KP+NI++ ++ +KL DFG A + + V ++I GTP ++
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFV 185
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM---- 225
APE+V +P AD+WS+GVI Y L G PF ++ + +I + +E
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFV 256
S K F++ LL K + RLT L HP++
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 143/261 (54%), Gaps = 3/261 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD-IHNLRQEIEILRKLK 61
+E++ V L+G+GSF VY+ +TG VA+K I K + + ++ E++I +LK
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDD-KCLPEEQVQSIAKQLVRALHYLH 119
H +I+E+ + FE +V E GE+ L++ K E + + Q++ + YLH
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S+ I+HRD+ N+L+ +K+ DFG A + ++ GTP Y++PE+ +
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+D+WSLG + Y L +G+PPF T++V + +V + P +S K + LL +
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRR 249
Query: 240 VPQNRLTWSALLEHPFVKETS 260
P +RL+ S++L+HPF+ S
Sbjct: 250 NPADRLSLSSVLDHPFMSRNS 270
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 146/268 (54%), Gaps = 4/268 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y + E +G G F KV TG+ VA+K IM D+ ++ EIE L+ L+H
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRH 67
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
Q+I ++ E+ + +V E+ G ELF+ + L EE+ + + +Q+V A+ Y+HS
Sbjct: 68 QHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ 127
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGF-ARAMSANTVVLRSIKGTPLYMAPELVREQPY- 179
HRD+KP+N+L +KL DFG A+ L++ G+ Y APEL++ + Y
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
AD+WS+G++LY L G PF ++V AL + I++ P +SP+ L+ +L
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQV 247
Query: 240 VPQNRLTWSALLEHPFVKETSDELNAWE 267
P+ R++ LL HP++ + + W+
Sbjct: 248 DPKKRISMKNLLNHPWIMQDYNYPVEWQ 275
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 134/245 (54%), Gaps = 16/245 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMK----FIMKHGKSEKDIHNLRQEIEILRKL 60
N+ + + +G G F +VY+ G VA+K F + K+ D +EI++L++L
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADC---IKEIDLLKQL 89
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILE----DDKCLPEEQVQSIAKQLVRAL 115
H N+I+ SF E +V E A G+L +++ + +PE V QL AL
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
++HS R++HRD+KP N+ I A VVKL D G R S+ T S+ GTP YM+PE +
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 176 EQPYNHTADLWSLGVILYELFVGQPPFYTN--SVYALIRHIVKDPVKYPDEMSPNFKSFL 233
E YN +D+WSLG +LYE+ Q PFY + ++Y+L + I + YP S ++ L
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--EQCDYPPLPSDHYSEEL 267
Query: 234 KGLLN 238
+ L+N
Sbjct: 268 RQLVN 272
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 145/262 (55%), Gaps = 3/262 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ NY +++ +G+G+F KV R TG+ VA+K I K + + L +E+ I++ L H
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + E+ + ++ E+A G E+F+ L + E++ +S +Q+V A+ Y H
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
RI+HRD+K +N+L+ A +K+ DFGF+ + L + G P Y APEL + + Y+
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-KLDAFCGAPPYAAPELFQGKKYDG 192
Query: 182 -TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLGVILY L G PF ++ L +++ + P MS + ++ LK L
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLN 252
Query: 241 PQNRLTWSALLEHPFVKETSDE 262
P R T +++ ++ +E
Sbjct: 253 PIKRGTLEQIMKDRWINAGHEE 274
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 146/262 (55%), Gaps = 3/262 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ NY +++ +G+G+F KV R TG+ VA+K I K + + L +E+ I++ L H
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 70
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + E+ + ++ E+A G E+F+ L + E++ +S +Q+V A+ Y H
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
RI+HRD+K +N+L+ A +K+ DFGF+ + L + G+P Y APEL + + Y+
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-KLDTFCGSPPYAAPELFQGKKYDG 189
Query: 182 -TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLGVILY L G PF ++ L +++ + P MS + ++ LK L
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLN 249
Query: 241 PQNRLTWSALLEHPFVKETSDE 262
P R T +++ ++ +E
Sbjct: 250 PIKRGTLEQIMKDRWINAGHEE 271
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 171/325 (52%), Gaps = 17/325 (5%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+E Y ++ +GEGSFGK + G+ +K I S K+ R+E+ +L +KH
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDK--CLPEEQVQSIAKQLVRALHYLH 119
NI++ +SFE +V ++ +G +LF+ + K E+Q+ Q+ AL ++H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
+I+HRD+K QNI + V+L DFG AR +++ + R+ GTP Y++PE+ +PY
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPY 202
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD---PVKYPDEMSPNFKSFLKGL 236
N+ +D+W+LG +LYEL + F S+ L+ I+ PV S + +S + L
Sbjct: 203 NNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSL--HYSYDLRSLVSQL 260
Query: 237 LNKVPQNRLTWSALLEHPFVKETSDELNAWELRATSVEARGCNATWTAEGN----AIQSS 292
+ P++R + +++LE F+ + ++ + +L A C T++ G+ A + +
Sbjct: 261 FKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEF----CLKTFSKFGSQPIPAKRPA 316
Query: 293 SGKSNSPAVSANN-TSPSLHTDVEL 316
SG+++ + A T P+ + L
Sbjct: 317 SGQNSISVMPAQKITKPAAKYGIPL 341
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 150/268 (55%), Gaps = 11/268 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHG-KSEKDIHNLRQEIEILRKLKH 62
+ Y ++G+GSFG+V + K TGQ A+K I K K + D +L +E+++L++L H
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 63 QNIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + FE F +V E + GELF+ + K E I +Q++ + Y+H N
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 122 RIIHRDMKPQNILIGAGSV---VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
+I+HRD+KP+N+L+ + S +++ DFG + A+ + I GT Y+APE++
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLH-GT 226
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLK 234
Y+ D+WS GVILY L G PPF + Y +++ + K + ++S + K ++
Sbjct: 227 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 286
Query: 235 GLLNKVPQNRLTWSALLEHPFVKETSDE 262
+L VP R++ L+H +++ + E
Sbjct: 287 KMLTYVPSMRISARDALDHEWIQTYTKE 314
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 150/268 (55%), Gaps = 11/268 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHG-KSEKDIHNLRQEIEILRKLKH 62
+ Y ++G+GSFG+V + K TGQ A+K I K K + D +L +E+++L++L H
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 63 QNIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + FE F +V E + GELF+ + K E I +Q++ + Y+H N
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 122 RIIHRDMKPQNILIGAGSV---VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
+I+HRD+KP+N+L+ + S +++ DFG + A+ + I GT Y+APE++
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLH-GT 227
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLK 234
Y+ D+WS GVILY L G PPF + Y +++ + K + ++S + K ++
Sbjct: 228 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 287
Query: 235 GLLNKVPQNRLTWSALLEHPFVKETSDE 262
+L VP R++ L+H +++ + E
Sbjct: 288 KMLTYVPSMRISARDALDHEWIQTYTKE 315
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 150/268 (55%), Gaps = 11/268 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHG-KSEKDIHNLRQEIEILRKLKH 62
+ Y ++G+GSFG+V + K TGQ A+K I K K + D +L +E+++L++L H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 63 QNIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + FE F +V E + GELF+ + K E I +Q++ + Y+H N
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 122 RIIHRDMKPQNILIGAGSV---VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
+I+HRD+KP+N+L+ + S +++ DFG + A+ + I GT Y+APE++
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLH-GT 203
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLK 234
Y+ D+WS GVILY L G PPF + Y +++ + K + ++S + K ++
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263
Query: 235 GLLNKVPQNRLTWSALLEHPFVKETSDE 262
+L VP R++ L+H +++ + E
Sbjct: 264 KMLTYVPSMRISARDALDHEWIQTYTKE 291
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 143 bits (360), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 151/274 (55%), Gaps = 20/274 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQN 64
+ ++ELVG G++G+VYKGR TGQ A+K + G E++I +QEI +L+K H+N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI---KQEINMLKKYSHHRN 82
Query: 65 IIEMLDSF--ESP----QEFCVVTEF-AQGELFEILEDDK--CLPEEQVQSIAKQLVRAL 115
I +F ++P + +V EF G + +++++ K L EE + I ++++R L
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV- 174
+LH +++IHRD+K QN+L+ + VKL DFG + + + GTP +MAPE++
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 175 -REQP---YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY--PDEMSPN 228
E P Y+ +DLWSLG+ E+ G PP + I ++P + S
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKK 262
Query: 229 FKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
F+SF++ L K R L++HPF+++ +E
Sbjct: 263 FQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNE 296
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 147/268 (54%), Gaps = 5/268 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ NY +++ +G+G+F KV R TG+ VA+K I K + + L +E+ I++ L H
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + E+ + +V E+A GE+F+ L + E++ ++ +Q+V A+ Y H
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
I+HRD+K +N+L+ A +K+ DFGF+ + L + G+P Y APEL + + Y+
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFCGSPPYAAPELFQGKKYDG 184
Query: 182 -TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLGVILY L G PF ++ L +++ + P MS + ++ LK L
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 244
Query: 241 PQNRLTWSALLEHPF--VKETSDELNAW 266
P R T +++ + V DEL +
Sbjct: 245 PSKRGTLEQIMKDRWMNVGHEDDELKPY 272
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 147/268 (54%), Gaps = 5/268 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ NY +++ +G+G+F KV R TG+ VA+K I K + + L +E+ I++ L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + E+ + +V E+A GE+F+ L + E++ ++ +Q+V A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
I+HRD+K +N+L+ A +K+ DFGF+ + L + G+P Y APEL + + Y+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFCGSPPYAAPELFQGKKYDG 191
Query: 182 -TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLGVILY L G PF ++ L +++ + P MS + ++ LK L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 241 PQNRLTWSALLEHPF--VKETSDELNAW 266
P R T +++ + V DEL +
Sbjct: 252 PSKRGTLEQIMKDRWMNVGHEDDELKPY 279
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 147/268 (54%), Gaps = 5/268 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ NY +++ +G+G+F KV R TG+ VA+K I K + + L +E+ I++ L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + E+ + +V E+A GE+F+ L + E++ ++ +Q+V A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
I+HRD+K +N+L+ A +K+ DFGF+ + L + G+P Y APEL + + Y+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFCGSPPYAAPELFQGKKYDG 191
Query: 182 -TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLGVILY L G PF ++ L +++ + P MS + ++ LK L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 241 PQNRLTWSALLEHPF--VKETSDELNAW 266
P R T +++ + V DEL +
Sbjct: 252 PSKRGTLEQIMKDRWMNVGHEDDELKPY 279
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 134/267 (50%), Gaps = 9/267 (3%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHG-KSEKDIHNLRQEIEILRK 59
+G++N+ I ++G+GSFGKV R K TG A+K + K + D+ E IL
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 60 LK-HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+ H + ++ F++P V EF G +L ++ + E + + A +++ AL +
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
LH II+RD+K N+L+ KL DFG + N V + GTP Y+APE+++E
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
Y D W++GV+LYE+ G PF + L I+ D V YP + + LK +
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFM 259
Query: 238 NKVPQNRL------TWSALLEHPFVKE 258
K P RL A+L HPF KE
Sbjct: 260 TKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 150/268 (55%), Gaps = 11/268 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHG-KSEKDIHNLRQEIEILRKLKH 62
+ Y ++G+GSFG+V + K TGQ A+K I K K + D +L +E+++L++L H
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 63 QNIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + FE F +V E + GELF+ + K E I +Q++ + Y+H N
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 122 RIIHRDMKPQNILIGAGSV---VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
+I+HRD+KP+N+L+ + S +++ DFG + A+ + I GT Y+APE++
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLH-GT 209
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLK 234
Y+ D+WS GVILY L G PPF + Y +++ + K + ++S + K ++
Sbjct: 210 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 269
Query: 235 GLLNKVPQNRLTWSALLEHPFVKETSDE 262
+L VP R++ L+H +++ + E
Sbjct: 270 KMLTYVPSMRISARDALDHEWIQTYTKE 297
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 146/263 (55%), Gaps = 10/263 (3%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y ++ +G G++G+V R K T A+K I K S L +E+ +L+ L H
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 64 NIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+++ D FE + + +V E + GELF+ + E I KQ++ + YLH +
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 123 IIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I+HRD+KP+N+L+ + +++K+ DFG + A+ N ++ GT Y+APE++R++ Y
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLS-AVFENQKKMKERLGTAYYIAPEVLRKK-Y 214
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY--PD--EMSPNFKSFLKG 235
+ D+WS+GVIL+ L G PPF + ++R + K + P+ +S K +K
Sbjct: 215 DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ 274
Query: 236 LLNKVPQNRLTWSALLEHPFVKE 258
+L Q R++ LEHP++KE
Sbjct: 275 MLQFDSQRRISAQQALEHPWIKE 297
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 146/268 (54%), Gaps = 5/268 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ NY +++ +G+G+F KV R TG+ VA+K I K + + L +E+ I++ L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + E+ + +V E+A GE+F+ L + E++ ++ +Q+V A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
I+HRD+K +N+L+ A +K+ DFGF+ + L + G P Y APEL + + Y+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDAFCGAPPYAAPELFQGKKYDG 191
Query: 182 -TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLGVILY L G PF ++ L +++ + P MS + ++ LK L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 241 PQNRLTWSALLEHPF--VKETSDELNAW 266
P R T +++ + V DEL +
Sbjct: 252 PSKRGTLEQIMKDRWMNVGHEDDELKPY 279
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 144/274 (52%), Gaps = 20/274 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGK---SEKDIHNLRQ----EIEI 56
ENY E++G G V + K T + A+K I G S +++ LR+ E++I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 57 LRKLK-HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRA 114
LRK+ H NII++ D++E+ F +V + +GELF+ L + L E++ + I + L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV 174
+ LH I+HRD+KP+NIL+ +KL DFGF+ + LRS+ GTP Y+APE++
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLRSVCGTPSYLAPEII 195
Query: 175 R-----EQP-YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DE 224
P Y D+WS GVI+Y L G PPF+ ++R I+ ++ D+
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 255
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S K + L PQ R T L HPF ++
Sbjct: 256 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 147/268 (54%), Gaps = 5/268 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ NY +++ +G+G+F KV R TG+ VA++ I K + + L +E+ I++ L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + E+ + +V E+A GE+F+ L + E++ ++ +Q+V A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
I+HRD+K +N+L+ A +K+ DFGF+ + L + G+P Y APEL + + Y+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFCGSPPYAAPELFQGKKYDG 191
Query: 182 -TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLGVILY L G PF ++ L +++ + P MS + ++ LK L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 241 PQNRLTWSALLEHPF--VKETSDELNAW 266
P R T +++ + V DEL +
Sbjct: 252 PSKRGTLEQIMKDRWMNVGHEDDELKPY 279
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 141 bits (355), Expect = 2e-33, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYN 211
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 212 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 268
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 145/272 (53%), Gaps = 19/272 (6%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFI------MKHGKSEKDIHNLRQEIEIL 57
+ Y +++G G V + + TG A+K + + + E+ R+E IL
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 58 RKLK-HQNIIEMLDSFESPQ-EFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRAL 115
R++ H +II ++DS+ES F V +GELF+ L + L E++ +SI + L+ A+
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV 213
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+LH+N I+HRD+KP+NIL+ ++L DFGF+ + LR + GTP Y+APE+++
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILK 272
Query: 176 -----EQP-YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEM 225
P Y DLW+ GVIL+ L G PPF+ ++R I++ ++ D+
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR 332
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
S K + LL P+ RLT L+HPF +
Sbjct: 333 SSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 161/312 (51%), Gaps = 23/312 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMK------FIMKHGKSEKDIHNLRQEIEILRK 59
Y + E++G+G+F V + + TGQ A+K F G S +D L++E I
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED---LKREASICHM 82
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQGE--LFEILE--DDKCLPEEQVQS-IAKQLVRA 114
LKH +I+E+L+++ S +V EF G FEI++ D + E V S +Q++ A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 115 LHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
L Y H N IIHRD+KP+N+L+ + + VKL DFG A + + +V GTP +MAP
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY-PDE---MSP 227
E+V+ +PY D+W GVIL+ L G PFY + L I+K K P + +S
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFY-GTKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 228 NFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAWELRATSVEARGCNATWTAEGN 287
+ K ++ +L P R+T L HP++KE L T + R NA +G
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGA 321
Query: 288 AIQS-SSGKSNS 298
+ + SS K NS
Sbjct: 322 VLAAVSSHKFNS 333
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 146/268 (54%), Gaps = 5/268 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ NY +++ +G+G+F KV R TG+ VA++ I K + + L +E+ I++ L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + E+ + +V E+A GE+F+ L + E++ ++ +Q+V A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
I+HRD+K +N+L+ A +K+ DFGF+ + L G+P Y APEL + + Y+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDEFCGSPPYAAPELFQGKKYDG 191
Query: 182 -TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLGVILY L G PF ++ L +++ + P MS + ++ LK L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 241 PQNRLTWSALLEHPF--VKETSDELNAW 266
P R T +++ + V DEL +
Sbjct: 252 PSKRGTLEQIMKDRWMNVGHEDDELKPY 279
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 141/260 (54%), Gaps = 14/260 (5%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+ V +G G+ VY+ ++K T + A+K + K D +R EI +L +L H NI
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVL----KKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 66 IEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
I++ + FE+P E +V E G ELF+ + + E KQ++ A+ YLH N I+
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIV 170
Query: 125 HRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
HRD+KP+N+L + +K+ DFG ++ + + V+++++ GTP Y APE++R Y
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVCGTPGYCAPEILRGCAYGP 229
Query: 182 TADLWSLGVILYELFVGQPPFYTN-SVYALIRHIVKDPV----KYPDEMSPNFKSFLKGL 236
D+WS+G+I Y L G PFY + R I+ + DE+S N K ++ L
Sbjct: 230 EVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKL 289
Query: 237 LNKVPQNRLTWSALLEHPFV 256
+ P+ RLT L+HP+V
Sbjct: 290 IVLDPKKRLTTFQALQHPWV 309
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 140 bits (353), Expect = 5e-33, Method: Composition-based stats.
Identities = 84/268 (31%), Positives = 142/268 (52%), Gaps = 5/268 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ NY +++ +G+G+F KV R TG+ VA+K I K + + L +E+ I + L H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + E+ + +V E+A GE+F+ L E++ ++ +Q+V A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
I+HRD+K +N+L+ A +K+ DFGF+ + L + G P Y APEL + + Y+
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN-KLDAFCGAPPYAAPELFQGKKYDG 191
Query: 182 -TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLGVILY L G PF ++ L +++ + P S + ++ LK L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLILN 251
Query: 241 PQNRLTWSALLEHPF--VKETSDELNAW 266
P R T + + + V DEL +
Sbjct: 252 PSKRGTLEQIXKDRWXNVGHEDDELKPY 279
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 143/274 (52%), Gaps = 20/274 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGK---SEKDIHNLRQ----EIEI 56
ENY E++G G V + K T + A+K I G S +++ LR+ E++I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 57 LRKLK-HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRA 114
LRK+ H NII++ D++E+ F +V + +GELF+ L + L E++ + I + L+
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV 174
+ LH I+HRD+KP+NIL+ +KL DFGF+ + LR + GTP Y+APE++
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLREVCGTPSYLAPEII 182
Query: 175 R-----EQP-YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DE 224
P Y D+WS GVI+Y L G PPF+ ++R I+ ++ D+
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 242
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S K + L PQ R T L HPF ++
Sbjct: 243 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 146/268 (54%), Gaps = 11/268 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHG-KSEKDIHNLRQEIEILRKLKH 62
+ Y ++G+GSFG+V + K TGQ A+K I K K + D +L +E+++L++L H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 63 QNIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI ++ + FE F +V E + GELF+ + K E I +Q++ + Y H N
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 122 RIIHRDMKPQNILIGAGSV---VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
+I+HRD+KP+N+L+ + S +++ DFG + A+ I GT Y+APE++
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI-GTAYYIAPEVLH-GT 203
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLK 234
Y+ D+WS GVILY L G PPF + Y +++ + K + ++S + K ++
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263
Query: 235 GLLNKVPQNRLTWSALLEHPFVKETSDE 262
L VP R++ L+H +++ + E
Sbjct: 264 KXLTYVPSXRISARDALDHEWIQTYTKE 291
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 139 bits (351), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 143/274 (52%), Gaps = 20/274 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGK---SEKDIHNLRQ----EIEI 56
ENY E++G G V + K T + A+K I G S +++ LR+ E++I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 57 LRKLK-HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRA 114
LRK+ H NII++ D++E+ F +V + +GELF+ L + L E++ + I + L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV 174
+ LH I+HRD+KP+NIL+ +KL DFGF+ + LR + GTP Y+APE++
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLREVCGTPSYLAPEII 195
Query: 175 R-----EQP-YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DE 224
P Y D+WS GVI+Y L G PPF+ ++R I+ ++ D+
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 255
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S K + L PQ R T L HPF ++
Sbjct: 256 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 139 bits (351), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 148/291 (50%), Gaps = 32/291 (10%)
Query: 2 GVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
G+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLH 119
H NI+++LD + + +V EF +L + ++ +P ++S QL++ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 180 NHTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPN 228
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 229 F-------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
F +S L +L+ P R++ A L HPF ++ +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 153/301 (50%), Gaps = 48/301 (15%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKD--IHNLR-QEIEILRK 59
+E Y I +GEGS+G V+K R + TGQ VA+K ++ SE D I + +EI +L++
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLE---SEDDPVIKKIALREIRMLKQ 58
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALHYL 118
LKH N++ +L+ F + +V E+ L E+ + +PE V+SI Q ++A+++
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 119 HSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQ 177
H + IHRD+KP+NILI SV+KLCDFGFAR ++ + T Y +PE LV +
Sbjct: 119 HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 178 PYNHTADLWSLGVILYELFVGQP---------------------------PFYTNSVYAL 210
Y D+W++G + EL G P F TN ++
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238
Query: 211 IRHIVKDP-------VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPF---VKETS 260
++ + DP +K+P+ P LKG L+ P RLT LL HP+ ++E
Sbjct: 239 VK--IPDPEDMEPLELKFPNISYPAL-GLLKGCLHMDPTERLTCEQLLHHPYFENIREIE 295
Query: 261 D 261
D
Sbjct: 296 D 296
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K TG AMK + K + K I + E IL+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+A G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N++I +K+ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 143/260 (55%), Gaps = 11/260 (4%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y ++E +G G+FG V++ K TG+ KFI + D + ++ EI I+ +L H +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFI--NTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 66 IEMLDSFESPQEFCVVTEF-AQGELFE-ILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
I + D+FE E ++ EF + GELF+ I +D + E +V + +Q L ++H + I
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI 170
Query: 124 IHRDMKPQNIL--IGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
+H D+KP+NI+ S VK+ DFG A ++ + +V + T + APE+V +P
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV-KVTTATAEFAAPEIVDREPVGF 229
Query: 182 TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDE----MSPNFKSFLKGLL 237
D+W++GV+ Y L G PF ++++ + ++ ++ +SP K F+K LL
Sbjct: 230 YTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLL 289
Query: 238 NKVPQNRLTWSALLEHPFVK 257
K P+ RLT LEHP++K
Sbjct: 290 QKEPRKRLTVHDALEHPWLK 309
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 142/259 (54%), Gaps = 4/259 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLK 61
+ +Y + + +G G+FGKV G+ + TG VA+K + + D+ +R+EI+ L+ +
Sbjct: 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H +II++ +P + +V E+ G ELF+ + + L E++ + + +Q++ + Y H
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY- 179
+ ++HRD+KP+N+L+ A K+ DFG + MS + LR G+P Y APE++ + Y
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
D+WS GVILY L G PF + V L + I P ++P+ S LK +L
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQV 253
Query: 240 VPQNRLTWSALLEHPFVKE 258
P R T + EH + K+
Sbjct: 254 DPMKRATIKDIREHEWFKQ 272
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 127/218 (58%), Gaps = 8/218 (3%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+E Y + LVGEGS+G V K R K TG+ VA+K ++ + +EI++L++L+H
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPE----EQVQSIAKQLVRALHYL 118
+N++ +L+ + + + +V EF IL+D + P + VQ Q++ + +
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVD---HTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 119 HSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQ 177
HS+ IIHRD+KP+NIL+ VVKLCDFGFAR ++A V T Y APE LV +
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDV 200
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV 215
Y D+W++G ++ E+F+G+P F +S + HI+
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---AGTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 136/253 (53%), Gaps = 13/253 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGK-SEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G GSFG VY R + VA+K + GK S + ++ +E+ L+KL+H N I+
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 71 SFESPQEFCVVTEFAQGELFEILE-DDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMK 129
+ +V E+ G ++LE K L E ++ ++ ++ L YLHS+ +IHRD+K
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 181
Query: 130 PQNILIGAGSVVKLCDFGFARAMS-ANTVVLRSIKGTPLYMAPELV---REQPYNHTADL 185
NIL+ +VKL DFG A M+ AN V GTP +MAPE++ E Y+ D+
Sbjct: 182 AGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKVDV 236
Query: 186 WSLGVILYELFVGQPPFYTNSVYALIRHIVKD--PVKYPDEMSPNFKSFLKGLLNKVPQN 243
WSLG+ EL +PP + + + + HI ++ P S F++F+ L K+PQ+
Sbjct: 237 WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQD 296
Query: 244 RLTWSALLEHPFV 256
R T LL+H FV
Sbjct: 297 RPTSEVLLKHRFV 309
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 136/253 (53%), Gaps = 13/253 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGK-SEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G GSFG VY R + VA+K + GK S + ++ +E+ L+KL+H N I+
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 71 SFESPQEFCVVTEFAQGELFEILE-DDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMK 129
+ +V E+ G ++LE K L E ++ ++ ++ L YLHS+ +IHRD+K
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 142
Query: 130 PQNILIGAGSVVKLCDFGFARAMS-ANTVVLRSIKGTPLYMAPELV---REQPYNHTADL 185
NIL+ +VKL DFG A M+ AN V GTP +MAPE++ E Y+ D+
Sbjct: 143 AGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKVDV 197
Query: 186 WSLGVILYELFVGQPPFYTNSVYALIRHIVKD--PVKYPDEMSPNFKSFLKGLLNKVPQN 243
WSLG+ EL +PP + + + + HI ++ P S F++F+ L K+PQ+
Sbjct: 198 WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQD 257
Query: 244 RLTWSALLEHPFV 256
R T LL+H FV
Sbjct: 258 RPTSEVLLKHRFV 270
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 188
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 248
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 249 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I +G GSFG+V + K TG AMK + K + K I + E I + +
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+A G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +K+ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K TG AMK + K + K I + E IL+ +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYN 209
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 210 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 266
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 5/238 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC---GTPEYLAPEIILSKGYN 237
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLN 238
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K TG AMK + K + K I + E IL+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 5/238 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 237
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLN 238
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 185
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 245
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 246 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 148/283 (52%), Gaps = 18/283 (6%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E + +E +G+GSFG+V+KG T Q VA+K I+ ++E +I +++QEI +L +
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
+ + S+ + ++ E+ G L E Q+ ++ K++++ L YLHS +
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
IHRD+K N+L+ VKL DFG A ++ + + GTP +MAPE++++ Y+ A
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 201
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLKGLLNK 239
D+WSLG+ EL G+PP NS +R + P P + + +FK F+ LNK
Sbjct: 202 DIWSLGITAIELAKGEPP---NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNK 258
Query: 240 VPQNRLTWSALLEHPFV----KETS------DELNAWELRATS 272
P R T LL+H F+ K+TS D W+ S
Sbjct: 259 DPSFRPTAKELLKHKFIVKNSKKTSYLTELIDRFKRWKAEGHS 301
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K TG AMK + K + K I + E IL+ +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYN 209
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 210 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 266
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 126/238 (52%), Gaps = 5/238 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K TG AMK + K + K I + E IL+ +
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYN 237
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLN 238
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K TG AMK + K + K I + E IL+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K TG AMK + K + K I + E IL+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 140/257 (54%), Gaps = 8/257 (3%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E + ++ +G+GSFG+VYKG +T + VA+K I+ ++E +I +++QEI +L +
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
I S+ + ++ E+ G L L E + +I +++++ L YLHS R
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK 137
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
IHRD+K N+L+ VKL DFG A ++ + GTP +MAPE++++ Y+ A
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DEMSPNFKSFLKGLLNK 239
D+WSLG+ EL G+PP NS +R + P P + S FK F++ LNK
Sbjct: 198 DIWSLGITAIELAKGEPP---NSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNK 254
Query: 240 VPQNRLTWSALLEHPFV 256
P+ R T LL+H F+
Sbjct: 255 DPRFRPTAKELLKHKFI 271
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 5/238 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIILSKGYN 203
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLN 238
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 204 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 261
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 146/288 (50%), Gaps = 32/288 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYPD-----EMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
+S L +L+ P R++ A L HPF ++
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+A G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N++I +K+ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 146/289 (50%), Gaps = 32/289 (11%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHSN 121
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 182 TA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF- 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 230 ------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 188
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 248
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 249 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +K+ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+A G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N++I +K+ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L ++ +P ++S QL++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 148/264 (56%), Gaps = 14/264 (5%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+ ++ E +G GSFG V+ R ++ G VA+K +M+ + ++ +E+ I+++L+H N
Sbjct: 38 DLNIKEKIGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 65 IIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKC---LPEEQVQSIAKQLVRALHYLHS 120
I+ + + P +VTE+ ++G L+ +L L E + S+A + + ++YLH+
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 121 NR--IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
I+HR++K N+L+ VK+CDFG +R ++ + +S GTP +MAPE++R++P
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 179 YNHTADLWSLGVILYELFVGQPPF---YTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
N +D++S GVIL+EL Q P+ V A + K ++ P ++P + ++G
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR-LEIPRNLNPQVAAIIEG 274
Query: 236 LLNKVPQNRLTWSALLE--HPFVK 257
P R +++ +++ P +K
Sbjct: 275 CWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 245
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 246 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 147/264 (55%), Gaps = 14/264 (5%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+ ++ E +G GSFG V+ R ++ G VA+K +M+ + ++ +E+ I+++L+H N
Sbjct: 38 DLNIKEKIGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 65 IIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKC---LPEEQVQSIAKQLVRALHYLHS 120
I+ + + P +VTE+ ++G L+ +L L E + S+A + + ++YLH+
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 121 NR--IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
I+HRD+K N+L+ VK+CDFG +R ++ + + GTP +MAPE++R++P
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 179 YNHTADLWSLGVILYELFVGQPPF---YTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
N +D++S GVIL+EL Q P+ V A + K ++ P ++P + ++G
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR-LEIPRNLNPQVAAIIEG 274
Query: 236 LLNKVPQNRLTWSALLE--HPFVK 257
P R +++ +++ P +K
Sbjct: 275 CWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 136 bits (342), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KP+N+LI +KL DFG ARA T Y APE++ Y
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 136 bits (342), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N++I +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIISKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 127/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++Y++ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 135 bits (341), Expect = 1e-31, Method: Composition-based stats.
Identities = 80/245 (32%), Positives = 135/245 (55%), Gaps = 6/245 (2%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTG----QTVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
+ +++++G+GSFGKV+ +K +G Q AMK + K +D + E +IL ++
Sbjct: 26 FELLKVLGQGSFGKVFL-VKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H I+++ +F++ + ++ +F +G +LF L + EE V+ +L AL +LHS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
II+RD+KP+NIL+ +KL DFG ++ + S GT YMAPE+V + +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 204
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
+AD WS GV+++E+ G PF + I+K + P +SP +S L+ L +
Sbjct: 205 QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRN 264
Query: 241 PQNRL 245
P NRL
Sbjct: 265 PANRL 269
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
+ ++ SF+ +V E+A G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N++I +K+ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KP+N+LI +KL DFG ARA T Y APE++ Y
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+A G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N++I +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
+ ++ SF+ +V E+A G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N++I +K+ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KP+N+LI +KL DFG ARA T Y APE++ Y
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
+ ++ SF+ +V E+A G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N++I +K+ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KP+N+LI +KL DFG ARA T Y APE++ Y
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G++F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +K+ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 141/255 (55%), Gaps = 4/255 (1%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E + +E +G+GSFG+V+KG T + VA+K I+ ++E +I +++QEI +L +
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
+ + S+ + ++ E+ G ++LE L E Q+ +I +++++ L YLHS +
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 144
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHT 182
IHRD+K N+L+ VKL DFG A ++ + + GTP +MAPE++++ Y+
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 183 ADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK-DPVKYPDEMSPNFKSFLKGLLNKVP 241
AD+WSLG+ EL G+PP ++ I K +P S K F++ LNK P
Sbjct: 205 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP 264
Query: 242 QNRLTWSALLEHPFV 256
R T LL+H F+
Sbjct: 265 SFRPTAKELLKHKFI 279
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K+I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+A G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N++I +K+ DFG A+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 147/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KP+N+LI +KL DFG ARA T Y APE++ Y
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G++F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +K+ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 146/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+ I ++E +EI +L++L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 146/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+ I ++E +EI +L++L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V EF +L + ++ +P ++S QL++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 139/272 (51%), Gaps = 21/272 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E+Y V+ +G GS+G+ K RRK G+ + K + +E + L E+ +LR+LKH
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 64 NIIEMLDSF--ESPQEFCVVTEFAQG-ELFEIL----EDDKCLPEEQVQSIAKQLVRALH 116
NI+ D + +V E+ +G +L ++ ++ + L EE V + QL AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 117 YLH-----SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
H + ++HRD+KP N+ + VKL DFG AR ++ +T ++ GTP YM+P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSP 185
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD-----PVKYPDEMS 226
E + YN +D+WSLG +LYEL PPF S L I + P +Y DE++
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 227 PNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
+ +LN +R + +LE+P + E
Sbjct: 246 ----EIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 139/272 (51%), Gaps = 21/272 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E+Y V+ +G GS+G+ K RRK G+ + K + +E + L E+ +LR+LKH
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 64 NIIEMLDSF--ESPQEFCVVTEFAQG-ELFEIL----EDDKCLPEEQVQSIAKQLVRALH 116
NI+ D + +V E+ +G +L ++ ++ + L EE V + QL AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 117 YLH-----SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
H + ++HRD+KP N+ + VKL DFG AR ++ +T ++ GTP YM+P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP 185
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD-----PVKYPDEMS 226
E + YN +D+WSLG +LYEL PPF S L I + P +Y DE++
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 227 PNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
+ +LN +R + +LE+P + E
Sbjct: 246 ----EIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+AP ++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPAIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 125/238 (52%), Gaps = 5/238 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL---CGTPEYLAPEIILSKGYN 202
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLN 238
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 203 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 260
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 147/282 (52%), Gaps = 15/282 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRR---KYTGQTVAMKFIMKHG--KSEKDIHNLRQEIEILR 58
E + ++ ++G+G +GKV++ R+ TG+ AMK + K ++ KD + + E IL
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
++KH I++++ +F++ + ++ E+ + GELF LE + E+ ++ AL +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
LH II+RD+KP+NI++ VKL DFG + + V + GT YMAPE++
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRS 196
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
+N D WSLG ++Y++ G PPF + I I+K + P ++ + LK LL
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLL 256
Query: 238 NKVPQNRL-----TWSALLEHPFVKETSDELNAWELRATSVE 274
+ +RL + HPF + +N EL A VE
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFR----HINWEELLARKVE 294
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 141/255 (55%), Gaps = 4/255 (1%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E + +E +G+GSFG+V+KG T + VA+K I+ ++E +I +++QEI +L +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
+ + S+ + ++ E+ G ++LE L E Q+ +I +++++ L YLHS +
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 124
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHT 182
IHRD+K N+L+ VKL DFG A ++ + + GTP +MAPE++++ Y+
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 183 ADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK-DPVKYPDEMSPNFKSFLKGLLNKVP 241
AD+WSLG+ EL G+PP ++ I K +P S K F++ LNK P
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP 244
Query: 242 QNRLTWSALLEHPFV 256
R T LL+H F+
Sbjct: 245 SFRPTAKELLKHKFI 259
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 163/333 (48%), Gaps = 32/333 (9%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMK------FIMKHGKSEKDIHNLRQEIEILRK 59
Y + E++G+G F V + + TGQ A+K F G S +D L++E I
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED---LKREASICHM 84
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQGE--LFEILE--DDKCLPEEQVQS-IAKQLVRA 114
LKH +I+E+L+++ S +V EF G FEI++ D + E V S +Q++ A
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 115 LHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
L Y H N IIHRD+KP +L+ + + VKL FG A + + +V GTP +MAP
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY-PDE---MSP 227
E+V+ +PY D+W GVIL+ L G PFY + L I+K K P + +S
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFY-GTKERLFEGIIKGKYKMNPRQWSHISE 263
Query: 228 NFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAWELRATSVEARGCNATWTAEGN 287
+ K ++ +L P R+T L HP++KE L T + R NA +G
Sbjct: 264 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGA 323
Query: 288 AIQS-SSGKSNS---------PAVSANNTSPSL 310
+ + SS K NS P S + TS L
Sbjct: 324 VLAAVSSHKFNSFYGDPPEELPDFSEDPTSSGL 356
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 146/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V E +L + ++ +P ++S QL++ L + HS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 134/245 (54%), Gaps = 4/245 (1%)
Query: 5 NYHVIELVGEGSFGKVY---KGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
++ +++++G+GSFGKV+ K R +G AMK + K +D + E +IL +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H ++++ +F++ + ++ +F +G +LF L + EE V+ +L L +LHS
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
II+RD+KP+NIL+ +KL DFG ++ + S GT YMAPE+V Q ++
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHS 208
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
H+AD WS GV+++E+ G PF + I+K + P +S +S L+ L +
Sbjct: 209 HSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRN 268
Query: 241 PQNRL 245
P NRL
Sbjct: 269 PANRL 273
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K I + E IL+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ G E+F L E + A Q+V YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP Y+APE++ + YN
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 217
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 145/290 (50%), Gaps = 32/290 (11%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+EN+ +E +GEG++G VYK R K TG+ VA+K I ++E +EI +L++L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
NI+++LD + + +V E +L ++ +P ++S QL++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+R++HRD+KPQN+LI +KL DFG ARA T Y APE++ Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 181 HTA-DLWSLGVILYELFVGQPPFYTNS----VYALIRHI-VKDPVKYP-----DEMSPNF 229
TA D+WSLG I E+ + F +S ++ + R + D V +P + P+F
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 230 -------------------KSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
+S L +L+ P R++ A L HPF ++ +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 146/282 (51%), Gaps = 15/282 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRR---KYTGQTVAMKFIMKHG--KSEKDIHNLRQEIEILR 58
E + ++ ++G+G +GKV++ R+ TG+ AMK + K ++ KD + + E IL
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
++KH I++++ +F++ + ++ E+ + GELF LE + E+ ++ AL +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
LH II+RD+KP+NI++ VKL DFG + + V GT YMAPE++
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
+N D WSLG ++Y++ G PPF + I I+K + P ++ + LK LL
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLL 256
Query: 238 NKVPQNRL-----TWSALLEHPFVKETSDELNAWELRATSVE 274
+ +RL + HPF + +N EL A VE
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFR----HINWEELLARKVE 294
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + TG AMK + K + K+I + E IL+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+A G E+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N++I +++ DFG A+ + T L GTP Y+APE++ + YN
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 140/255 (54%), Gaps = 4/255 (1%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E + +E +G+GSFG+V+KG T + VA+K I+ ++E +I +++QEI +L +
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
+ + S+ + ++ E+ G ++LE L E Q+ +I +++++ L YLHS +
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 139
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHT 182
IHRD+K N+L+ VKL DFG A ++ + GTP +MAPE++++ Y+
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 183 ADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK-DPVKYPDEMSPNFKSFLKGLLNKVP 241
AD+WSLG+ EL G+PP ++ I K +P S K F++ LNK P
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP 259
Query: 242 QNRLTWSALLEHPFV 256
R T LL+H F+
Sbjct: 260 SFRPTAKELLKHKFI 274
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHNLRQEIEILRKLK 61
++ + I+ +G GSFG+V + K +G AMK + K + K I + E IL+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
++++ SF+ +V E+ A GE+F L E + A Q+V YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+I+RD+KP+N+LI +++ DFGFA+ + T L GTP +APE++ + YN
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEALAPEIILSKGYN 216
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
D W+LGV++YE+ G PPF+ + + IV V++P S + K L+ LL
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 140/255 (54%), Gaps = 4/255 (1%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E + +E +G+GSFG+V+KG T + VA+K I+ ++E +I +++QEI +L +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
+ + S+ + ++ E+ G ++LE L E Q+ +I +++++ L YLHS +
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 124
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHT 182
IHRD+K N+L+ VKL DFG A ++ + GTP +MAPE++++ Y+
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 183 ADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK-DPVKYPDEMSPNFKSFLKGLLNKVP 241
AD+WSLG+ EL G+PP ++ I K +P S K F++ LNK P
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP 244
Query: 242 QNRLTWSALLEHPFV 256
R T LL+H F+
Sbjct: 245 SFRPTAKELLKHKFI 259
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 157/312 (50%), Gaps = 23/312 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMK------FIMKHGKSEKDIHNLRQEIEILRK 59
Y + E++G+G F V + + TGQ A+K F G S +D L++E I
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED---LKREASICHM 82
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQGE--LFEILE--DDKCLPEEQVQS-IAKQLVRA 114
LKH +I+E+L+++ S +V EF G FEI++ D + E V S +Q++ A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 115 LHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
L Y H N IIHRD+KP +L+ + + VKL FG A + + +V GTP +MAP
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY-PDE---MSP 227
E+V+ +PY D+W GVIL+ L G PFY + L I+K K P + +S
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFY-GTKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 228 NFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAWELRATSVEARGCNATWTAEGN 287
+ K ++ +L P R+T L HP++KE L T + R NA +G
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGA 321
Query: 288 AIQS-SSGKSNS 298
+ + SS K NS
Sbjct: 322 VLAAVSSHKFNS 333
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 132 bits (333), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 139/259 (53%), Gaps = 4/259 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLK 61
+ +Y + + +G G+FGKV G + TG VA+K + + D+ +++EI+ L+ +
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H +II++ +P +F +V E+ G ELF+ + + E + + + +Q++ A+ Y H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY- 179
+ ++HRD+KP+N+L+ A K+ DFG + MS LR+ G+P Y APE++ + Y
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRTSCGSPNYAAPEVISGRLYA 188
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
D+WS GVILY L G PF V L + I P+ ++ + + L +L
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 240 VPQNRLTWSALLEHPFVKE 258
P R T + EH + K+
Sbjct: 249 DPLKRATIKDIREHEWFKQ 267
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 139/265 (52%), Gaps = 13/265 (4%)
Query: 3 VENYHVIE-LVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
+ Y+ +E +G GS+G+V +K T A K I K+ +D+ +QEIEI++ L
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY--FVEDVDRFKQEIEIMKSLD 81
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H NII + ++FE + +V E GELFE + + E I K ++ A+ Y H
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 121 NRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
+ HRD+KP+N L S +KL DFG A ++R+ GTP Y++P+++ E
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKVGTPYYVSPQVL-EG 199
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDE----MSPNFKSFL 233
Y D WS GV++Y L G PPF + ++ I + +P++ +SP +S +
Sbjct: 200 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLI 259
Query: 234 KGLLNKVPQNRLTWSALLEHPFVKE 258
+ LL K P+ R+T LEH + ++
Sbjct: 260 RRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 139/265 (52%), Gaps = 13/265 (4%)
Query: 3 VENYHVIE-LVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
+ Y+ +E +G GS+G+V +K T A K I K+ +D+ +QEIEI++ L
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY--FVEDVDRFKQEIEIMKSLD 64
Query: 62 HQNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H NII + ++FE + +V E GELFE + + E I K ++ A+ Y H
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 121 NRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
+ HRD+KP+N L S +KL DFG A ++R+ GTP Y++P+++ E
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKVGTPYYVSPQVL-EG 182
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDE----MSPNFKSFL 233
Y D WS GV++Y L G PPF + ++ I + +P++ +SP +S +
Sbjct: 183 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLI 242
Query: 234 KGLLNKVPQNRLTWSALLEHPFVKE 258
+ LL K P+ R+T LEH + ++
Sbjct: 243 RRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 138/259 (53%), Gaps = 4/259 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLK 61
+ +Y + + +G G+FGKV G + TG VA+K + + D+ +++EI+ L+ +
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H +II++ +P +F +V E+ G ELF+ + + E + + + +Q++ A+ Y H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY- 179
+ ++HRD+KP+N+L+ A K+ DFG + MS LR G+P Y APE++ + Y
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRDSCGSPNYAAPEVISGRLYA 188
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
D+WS GVILY L G PF V L + I P+ ++ + + L +L
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 240 VPQNRLTWSALLEHPFVKE 258
P R T + EH + K+
Sbjct: 249 DPLKRATIKDIREHEWFKQ 267
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 128/228 (56%), Gaps = 3/228 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+ NY + + +G+G+F KV R TG+ VA+K I K + + L +E+ I++ L H
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + E+ + +V E+A GE+F+ L + E++ ++ +Q+V A+ Y H
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
I+HRD+K +N+L+ +K+ DFGF+ + L + G+P Y APEL + + Y+
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN-KLDTFCGSPPYAAPELFQGKKYDG 192
Query: 182 -TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPN 228
D+WSLGVILY L G PF ++ L +++ + P MS +
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 240
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 21/280 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK----HGKSEKDIHNLRQ------- 52
E+Y + +G G++G+V + K A+K I K G+ D N+ +
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 53 EIEILRKLKHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQL 111
EI +L+ L H NII++ D FE + F +VTEF +G ELFE + + E +I KQ+
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 112 VRALHYLHSNRIIHRDMKPQNILIGAGSV---VKLCDFGFARAMSANTVVLRSIKGTPLY 168
+ + YLH + I+HRD+KP+NIL+ + +K+ DFG + S + LR GT Y
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-YKLRDRLGTAYY 214
Query: 169 MAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYP----DE 224
+APE+++ + YN D+WS GVI+Y L G PPF + +I+ + K +
Sbjct: 215 IAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKN 273
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
+S K +K +L R T L ++K+ ++ +N
Sbjct: 274 ISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNIN 313
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 137/272 (50%), Gaps = 21/272 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E+Y V+ +G GS+G+ K RRK G+ + K + +E + L E+ +LR+LKH
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 64 NIIEMLDSF--ESPQEFCVVTEFAQG-ELFEIL----EDDKCLPEEQVQSIAKQLVRALH 116
NI+ D + +V E+ +G +L ++ ++ + L EE V + QL AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 117 YLH-----SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
H + ++HRD+KP N+ + VKL DFG AR ++ + + GTP YM+P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSP 185
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD-----PVKYPDEMS 226
E + YN +D+WSLG +LYEL PPF S L I + P +Y DE++
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELN 245
Query: 227 PNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
+ +LN +R + +LE+P + E
Sbjct: 246 ----EIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 142/262 (54%), Gaps = 11/262 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHG-KSEKDIHNLRQEIEILRKLKH 62
+ Y ++ +G G++G+V + K TG A+K I K + + L E+ +L++L H
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 63 QNIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + FE + + +V E + GELF+ + + E I KQ++ YLH +
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 123
Query: 122 RIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
I+HRD+KP+N+L+ + S ++K+ DFG + + + GT Y+APE++R++
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEVLRKK- 181
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY--PD--EMSPNFKSFLK 234
Y+ D+WS GVILY L G PPF + +++ + K + PD ++S K +K
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 241
Query: 235 GLLNKVPQNRLTWSALLEHPFV 256
+L P R++ L HP++
Sbjct: 242 LMLTYEPSKRISAEEALNHPWI 263
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH------GKSEKDIHNLRQEIEIL 57
+ Y + + +G G+ G+V + T + VA+K I K + N+ EIEIL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+KL H II++ + F++ + V+ GELF+ + +K L E + Q++ A+ Y
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL- 173
LH N IIHRD+KP+N+L+ + ++K+ DFG ++ + T ++R++ GTP Y+APE+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 188
Query: 174 --VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY---PD---EM 225
V YN D WSLGVIL+ G PPF + ++ + KY P+ E+
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG-KYNFIPEVWAEV 247
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S +K LL P+ R T L HP++++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH------GKSEKDIHNLRQEIEIL 57
+ Y + + +G G+ G+V + T + VA+K I K + N+ EIEIL
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+KL H II++ + F++ + V+ GELF+ + +K L E + Q++ A+ Y
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 118 LHSNRIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL- 173
LH N IIHRD+KP+N+L+ + ++K+ DFG ++ + T ++R++ GTP Y+APE+
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 194
Query: 174 --VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY---PD---EM 225
V YN D WSLGVIL+ G PPF + ++ + KY P+ E+
Sbjct: 195 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG-KYNFIPEVWAEV 253
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S +K LL P+ R T L HP++++
Sbjct: 254 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH------GKSEKDIHNLRQEIEIL 57
+ Y + + +G G+ G+V + T + VA+K I K + N+ EIEIL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+KL H II++ + F++ + V+ GELF+ + +K L E + Q++ A+ Y
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL- 173
LH N IIHRD+KP+N+L+ + ++K+ DFG ++ + T ++R++ GTP Y+APE+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 188
Query: 174 --VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY---PD---EM 225
V YN D WSLGVIL+ G PPF + ++ + KY P+ E+
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG-KYNFIPEVWAEV 247
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S +K LL P+ R T L HP++++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 142/262 (54%), Gaps = 11/262 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHG-KSEKDIHNLRQEIEILRKLKH 62
+ Y ++ +G G++G+V + K TG A+K I K + + L E+ +L++L H
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 63 QNIIEMLDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+++ + FE + + +V E + GELF+ + + E I KQ++ YLH +
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 140
Query: 122 RIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
I+HRD+KP+N+L+ + S ++K+ DFG + + + GT Y+APE++R++
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEVLRKK- 198
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY--PD--EMSPNFKSFLK 234
Y+ D+WS GVILY L G PPF + +++ + K + PD ++S K +K
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 258
Query: 235 GLLNKVPQNRLTWSALLEHPFV 256
+L P R++ L HP++
Sbjct: 259 LMLTYEPSKRISAEEALNHPWI 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH------GKSEKDIHNLRQEIEIL 57
+ Y + + +G G+ G+V + T + VA+K I K + N+ EIEIL
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+KL H II++ + F++ + V+ GELF+ + +K L E + Q++ A+ Y
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 118 LHSNRIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL- 173
LH N IIHRD+KP+N+L+ + ++K+ DFG ++ + T ++R++ GTP Y+APE+
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 187
Query: 174 --VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY---PD---EM 225
V YN D WSLGVIL+ G PPF + ++ + KY P+ E+
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG-KYNFIPEVWAEV 246
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S +K LL P+ R T L HP++++
Sbjct: 247 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH------GKSEKDIHNLRQEIEIL 57
+ Y + + +G G+ G+V + T + VA+K I K + N+ EIEIL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+KL H II++ + F++ + V+ GELF+ + +K L E + Q++ A+ Y
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 118 LHSNRIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL- 173
LH N IIHRD+KP+N+L+ + ++K+ DFG ++ + T ++R++ GTP Y+APE+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 188
Query: 174 --VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY---PD---EM 225
V YN D WSLGVIL+ G PPF + ++ + KY P+ E+
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG-KYNFIPEVWAEV 247
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S +K LL P+ R T L HP++++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 135/246 (54%), Gaps = 6/246 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTG----QTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
+ +++++G+GSFGKV+ +K +G Q AMK + K +D + E +IL ++
Sbjct: 26 QFELLKVLGQGSFGKVFL-VKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
H I+++ +F++ + ++ +F +G +LF L + EE V+ +L AL +LH
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S II+RD+KP+NIL+ +KL DFG ++ + S GT YMAPE+V + +
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+AD WS GV+++E+ G PF + I+K + P +SP +S L+ L +
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKR 264
Query: 240 VPQNRL 245
P NRL
Sbjct: 265 NPANRL 270
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 135/246 (54%), Gaps = 6/246 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTG----QTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
+ +++++G+GSFGKV+ +K +G Q AMK + K +D + E +IL ++
Sbjct: 25 QFELLKVLGQGSFGKVFL-VKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
H I+++ +F++ + ++ +F +G +LF L + EE V+ +L AL +LH
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
S II+RD+KP+NIL+ +KL DFG ++ + S GT YMAPE+V + +
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+AD WS GV+++E+ G PF + I+K + P +SP +S L+ L +
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKR 263
Query: 240 VPQNRL 245
P NRL
Sbjct: 264 NPANRL 269
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 130 bits (326), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR--SIKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R S GT Y++PEL+ E+
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 272
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 273 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 301
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 130 bits (326), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVA-MKFIMKHGKSEKDIHNLRQEIEILRK 59
MG + + ++G G FG+V+ + K TG+ A K K K K E +IL K
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQG-----ELFEILEDDKCLPEEQVQSIAKQLVRA 114
+ + I+ + +FE+ + C+V G ++ + ED+ E + Q+V
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV 174
L +LH II+RD+KP+N+L+ V++ D G A + A + GTP +MAPEL+
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPDEMSPNFK 230
+ Y+ + D ++LGV LYE+ + PF L + +++ V YPD+ SP K
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
Query: 231 SFLKGLLNKVPQNRLTW-----SALLEHPFVKETS 260
F + LL K P+ RL + L HP ++ S
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 130 bits (326), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 140/262 (53%), Gaps = 11/262 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+++Y + E +G G+FG V++ + TG A KF+M +S+K+ +R+EI+ + L+H
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET--VRKEIQTMSVLRH 213
Query: 63 QNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDD-KCLPEEQVQSIAKQLVRALHYLHS 120
++ + D+FE E ++ EF + GELFE + D+ + E++ +Q+ + L ++H
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 273
Query: 121 NRIIHRDMKPQNILIGA--GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
N +H D+KP+NI+ + +KL DFG + V + GT + APE+ +P
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAPEVAEGKP 332
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDE----MSPNFKSFLK 234
+ D+WS+GV+ Y L G PF + +R++ D +S + K F++
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR 392
Query: 235 GLLNKVPQNRLTWSALLEHPFV 256
LL P R+T LEHP++
Sbjct: 393 KLLLADPNTRMTIHQALEHPWL 414
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 134/254 (52%), Gaps = 9/254 (3%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK-DIHNLRQEIEILRK 59
+ +++ ++ +G+GSFGKV ++ T + AMK++ K E+ ++ N+ +E++I++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 60 LKHQNIIEMLDSFESPQE-FCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYL 118
L+H ++ + SF+ ++ F VV G+L L+ + EE V+ +LV AL YL
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131
Query: 119 HSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
+ RIIHRDMKP NIL+ V + DF A AM + ++ GT YMAPE+ +
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGHVHITDFNIA-AMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 179 ---YNHTADLWSLGVILYELFVGQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSF 232
Y+ D WSLGV YEL G+ P++ + S ++ V YP S S
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSL 250
Query: 233 LKGLLNKVPQNRLT 246
LK LL P R +
Sbjct: 251 LKKLLEPNPDQRFS 264
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVA-MKFIMKHGKSEKDIHNLRQEIEILRK 59
MG + + ++G G FG+V+ + K TG+ A K K K K E +IL K
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQG-----ELFEILEDDKCLPEEQVQSIAKQLVRA 114
+ + I+ + +FE+ + C+V G ++ + ED+ E + Q+V
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV 174
L +LH II+RD+KP+N+L+ V++ D G A + A + GTP +MAPEL+
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPDEMSPNFK 230
+ Y+ + D ++LGV LYE+ + PF L + +++ V YPD+ SP K
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
Query: 231 SFLKGLLNKVPQNRLTW-----SALLEHPFVKETS 260
F + LL K P+ RL + L HP ++ S
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVA-MKFIMKHGKSEKDIHNLRQEIEILRK 59
MG + + ++G G FG+V+ + K TG+ A K K K K E +IL K
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQG-----ELFEILEDDKCLPEEQVQSIAKQLVRA 114
+ + I+ + +FE+ + C+V G ++ + ED+ E + Q+V
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV 174
L +LH II+RD+KP+N+L+ V++ D G A + A + GTP +MAPEL+
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPDEMSPNFK 230
+ Y+ + D ++LGV LYE+ + PF L + +++ V YPD+ SP K
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
Query: 231 SFLKGLLNKVPQNRLTW-----SALLEHPFVKETS 260
F + LL K P+ RL + L HP ++ S
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 142/279 (50%), Gaps = 14/279 (5%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEML 69
E++G G FG+V+K TG +A K I G KD ++ EI ++ +L H N+I++
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLY 152
Query: 70 DSFESPQEFCVVTEFAQG-ELFE-ILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
D+FES + +V E+ G ELF+ I+++ L E KQ+ + ++H I+H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 128 MKPQNILI--GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADL 185
+KP+NIL +K+ DFG AR L+ GTP ++APE+V + D+
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARRYKPREK-LKVNFGTPEFLAPEVVNYDFVSFPTDM 271
Query: 186 WSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDE----MSPNFKSFLKGLLNKVP 241
WS+GVI Y L G PF ++ + +I+ DE +S K F+ LL K
Sbjct: 272 WSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEK 331
Query: 242 QNRLTWSALLEHPFVKETSDELNAWELRATSVEARGCNA 280
R++ S L+HP++ SD L A + RG +A
Sbjct: 332 SWRISASEALKHPWL---SDHKLHSRLSAQKKKNRGSDA 367
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 15/275 (5%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVA-MKFIMKHGKSEKDIHNLRQEIEILRK 59
MG + + ++G G FG+V+ + K TG+ A K K K K E +IL K
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQG-----ELFEILEDDKCLPEEQVQSIAKQLVRA 114
+ + I+ + +FE+ + C+V G ++ + ED+ E + Q+V
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV 174
L +LH II+RD+KP+N+L+ V++ D G A + A + GTP +MAPEL+
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPDEMSPNFK 230
+ Y+ + D ++LGV LYE+ + PF L + +++ V YPD+ SP K
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
Query: 231 SFLKGLLNKVPQNRLTW-----SALLEHPFVKETS 260
F + LL K P+ RL + L HP ++ S
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR--SIKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R S GT Y++PEL+ E+
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 268
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 269 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 297
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 269
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 270 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 298
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 300
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 300
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 140/262 (53%), Gaps = 11/262 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+++Y + E +G G+FG V++ + TG A KF+M +S+K+ +R+EI+ + L+H
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET--VRKEIQTMSVLRH 107
Query: 63 QNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDD-KCLPEEQVQSIAKQLVRALHYLHS 120
++ + D+FE E ++ EF + GELFE + D+ + E++ +Q+ + L ++H
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 121 NRIIHRDMKPQNILIGA--GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
N +H D+KP+NI+ + +KL DFG + V + GT + APE+ +P
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAPEVAEGKP 226
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDE----MSPNFKSFLK 234
+ D+WS+GV+ Y L G PF + +R++ D +S + K F++
Sbjct: 227 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR 286
Query: 235 GLLNKVPQNRLTWSALLEHPFV 256
LL P R+T LEHP++
Sbjct: 287 KLLLADPNTRMTIHQALEHPWL 308
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH------GKSEKDIHNLRQEIEIL 57
+ Y + + +G G+ G+V + T + VA++ I K + N+ EIEIL
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+KL H II++ + F++ + V+ GELF+ + +K L E + Q++ A+ Y
Sbjct: 209 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 118 LHSNRIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL- 173
LH N IIHRD+KP+N+L+ + ++K+ DFG ++ + T ++R++ GTP Y+APE+
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 327
Query: 174 --VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY---PD---EM 225
V YN D WSLGVIL+ G PPF + ++ + KY P+ E+
Sbjct: 328 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG-KYNFIPEVWAEV 386
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S +K LL P+ R T L HP++++
Sbjct: 387 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 272
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 273 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 301
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 269
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 270 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 298
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 269
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 270 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 298
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 144/291 (49%), Gaps = 36/291 (12%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+E YH +E +GEG++G VYK + Y G+T A+K I + E +EI IL++LKH
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC---LPEEQVQSIAKQLVRALHYLH 119
NI+++ D + + +V E +L ++L D C L +S QL+ + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQP 178
R++HRD+KPQN+LI +K+ DFG ARA T Y AP+ L+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK-----DPVKYPD-----EMSPN 228
Y+ T D+WS+G I E+ G P F S + I + + +P+ + PN
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 229 F--------KSFLKG-------LLNKV----PQNRLTWSALLEHPFVKETS 260
F +SFLKG LL+K+ P R+T LEH + KE +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 300
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 144/291 (49%), Gaps = 36/291 (12%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+E YH +E +GEG++G VYK + Y G+T A+K I + E +EI IL++LKH
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC---LPEEQVQSIAKQLVRALHYLH 119
NI+++ D + + +V E +L ++L D C L +S QL+ + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQP 178
R++HRD+KPQN+LI +K+ DFG ARA T Y AP+ L+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK-----DPVKYPD-----EMSPN 228
Y+ T D+WS+G I E+ G P F S + I + + +P+ + PN
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 229 F--------KSFLKG-------LLNKV----PQNRLTWSALLEHPFVKETS 260
F +SFLKG LL+K+ P R+T LEH + KE +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 144/291 (49%), Gaps = 36/291 (12%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+E YH +E +GEG++G VYK + Y G+T A+K I + E +EI IL++LKH
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC---LPEEQVQSIAKQLVRALHYLH 119
NI+++ D + + +V E +L ++L D C L +S QL+ + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQP 178
R++HRD+KPQN+LI +K+ DFG ARA T Y AP+ L+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK-----DPVKYPD-----EMSPN 228
Y+ T D+WS+G I E+ G P F S + I + + +P+ + PN
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 229 F--------KSFLKG-------LLNKV----PQNRLTWSALLEHPFVKETS 260
F +SFLKG LL+K+ P R+T LEH + KE +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH------GKSEKDIHNLRQEIEIL 57
+ Y + + +G G+ G+V + T + VA++ I K + N+ EIEIL
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+KL H II++ + F++ + V+ GELF+ + +K L E + Q++ A+ Y
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 118 LHSNRIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL- 173
LH N IIHRD+KP+N+L+ + ++K+ DFG ++ + T ++R++ GTP Y+APE+
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 313
Query: 174 --VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKY---PD---EM 225
V YN D WSLGVIL+ G PPF + ++ + KY P+ E+
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG-KYNFIPEVWAEV 372
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S +K LL P+ R T L HP++++
Sbjct: 373 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 194 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 253
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 254 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 282
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 268
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 269 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 297
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 117/202 (57%), Gaps = 3/202 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+E Y +E VGEG++G VYK + G+ VA+K I + E +EI +L++L H
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSN 121
NI+ ++D S + +V EF + +L ++L+++K L + Q++ QL+R + + H +
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQPYN 180
RI+HRD+KPQN+LI + +KL DFG ARA T Y AP+ L+ + Y+
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+ D+WS+G I E+ G+P F
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLF 220
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 139/274 (50%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 217 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 276
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 277 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 305
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 117/202 (57%), Gaps = 3/202 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+E Y +E VGEG++G VYK + G+ VA+K I + E +EI +L++L H
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSN 121
NI+ ++D S + +V EF + +L ++L+++K L + Q++ QL+R + + H +
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQPYN 180
RI+HRD+KPQN+LI + +KL DFG ARA T Y AP+ L+ + Y+
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+ D+WS+G I E+ G+P F
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLF 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ G L + + E + ++V AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR--SIKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R S GT Y++PEL+ E+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
+ ++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 212 SKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 300
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 122/218 (55%), Gaps = 9/218 (4%)
Query: 47 IHNLRQEIEILRKLKHQNIIEMLDSFESPQE---FCVVTEFAQGELFEILEDDKCLPEEQ 103
I + QEI IL+KL H N++++++ + P E + V QG + E+ K L E+Q
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKPLSEDQ 138
Query: 104 VQSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIK 163
+ + L++ + YLH +IIHRD+KP N+L+G +K+ DFG + + +L +
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV 198
Query: 164 GTPLYMAPELVRE--QPYNHTA-DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVK 220
GTP +MAPE + E + ++ A D+W++GV LY GQ PF + L I ++
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALE 258
Query: 221 YPD--EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFV 256
+PD +++ + K + +L+K P++R+ + HP+V
Sbjct: 259 FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 127 bits (320), Expect = 3e-29, Method: Composition-based stats.
Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 5/273 (1%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGK-SEKDIHNLRQEIEILR- 58
+ +E++ + +++G+GSFGKV+ K T Q A+K + K + D+ E +L
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+H + M +F++ + V E+ G +L ++ + A +++ L +
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 134
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
LHS I++RD+K NIL+ +K+ DFG + GTP Y+APE++ Q
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
YNH+ D WS GV+LYE+ +GQ PF+ L I D YP + K L L
Sbjct: 195 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLF 254
Query: 238 NKVPQNRL-TWSALLEHPFVKETS-DELNAWEL 268
+ P+ RL + +HP +E + +EL E+
Sbjct: 255 VREPEKRLGVRGDIRQHPLFREINWEELERKEI 287
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 82
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 83 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 142
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 201
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 202 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 261
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 262 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 299
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 140/259 (54%), Gaps = 14/259 (5%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRR---KYTGQTVAMKFIMKHG--KSEKDIHNLRQEIE 55
+G+EN+ +++++G G++GKV+ R+ TG+ AMK + K + K + R E +
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 56 ILRKLKHQNIIEMLD-SFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVR 113
+L ++ + L +F++ + ++ ++ G ELF L + E +VQ ++V
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVL 170
Query: 114 ALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN-TVVLRSIKGTPLYMAPE 172
AL +LH II+RD+K +NIL+ + V L DFG ++ A+ T GT YMAP+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 173 LVR--EQPYNHTADLWSLGVILYELFVGQPPFYT----NSVYALIRHIVKDPVKYPDEMS 226
+VR + ++ D WSLGV++YEL G PF NS + R I+K YP EMS
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 290
Query: 227 PNFKSFLKGLLNKVPQNRL 245
K ++ LL K P+ RL
Sbjct: 291 ALAKDLIQRLLMKDPKKRL 309
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 187 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 246
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 247 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 275
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 118
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 119 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 237
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 238 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 297
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 298 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 335
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 112
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 231
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 291
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 292 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 329
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 66
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 185
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 246 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 283
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 150/278 (53%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 66
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ + TP Y+A
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCY-TPYYVA 185
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 246 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 283
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 67
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 68 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 127
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 186
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 187 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 246
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 247 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 284
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 247
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 248 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 276
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 11 LVGEGSFGKVYK-----GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+G+G F K ++ + + G+ V ++K + EK + EI I R L HQ++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 83
Query: 66 IEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ FE VV E + L E+ + K L E + + +Q+V YLH NR+I
Sbjct: 84 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 143
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTAD 184
HRD+K N+ + VK+ DFG A + + +++ GTP Y+APE++ ++ ++ D
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 203
Query: 185 LWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNR 244
+WS+G I+Y L VG+PPF T+ + I K+ P ++P S ++ +L P R
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 263
Query: 245 LTWSALLEHPF 255
T + LL F
Sbjct: 264 PTINELLNDEF 274
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 139/274 (50%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF R T + A+K + K H E + + +E +++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 269
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 270 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 298
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 138/274 (50%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P P + ++ LL
Sbjct: 215 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVL 274
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 275 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 303
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 190 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 249
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 250 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 278
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 11 LVGEGSFGKVYK-----GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+G+G F K ++ + + G+ V ++K + EK + EI I R L HQ++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 79
Query: 66 IEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ FE VV E + L E+ + K L E + + +Q+V YLH NR+I
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTAD 184
HRD+K N+ + VK+ DFG A + + +++ GTP Y+APE++ ++ ++ D
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 185 LWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNR 244
+WS+G I+Y L VG+PPF T+ + I K+ P ++P S ++ +L P R
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 259
Query: 245 LTWSALLEHPF 255
T + LL F
Sbjct: 260 PTINELLNDEF 270
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 146/268 (54%), Gaps = 26/268 (9%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEML 69
+++G G GKV + + TGQ A+K + K+ +++ + Q +I+ +L
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQ------ASGGPHIVCIL 88
Query: 70 DSFESPQE----FCVVTEFAQG-ELFEILED--DKCLPEEQVQSIAKQLVRALHYLHSNR 122
D +E+ ++ E +G ELF +++ D+ E + I + + A+ +LHS+
Sbjct: 89 DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 148
Query: 123 IIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L + +V+KL DFGFA+ + N L++ TP Y+APE++ + Y
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKY 206
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD----EMSPNFKS 231
+ + D+WSLGVI+Y L G PPFY+N+ A + R I +P+ E+S + K
Sbjct: 207 DKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQ 266
Query: 232 FLKGLLNKVPQNRLTWSALLEHPFVKET 259
++ LL P RLT + + HP++ ++
Sbjct: 267 LIRLLLKTDPTERLTITQFMNHPWINQS 294
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 11 LVGEGSFGKVYK-----GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+G+G F K ++ + + G+ V ++K + EK + EI I R L HQ++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 79
Query: 66 IEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ FE VV E + L E+ + K L E + + +Q+V YLH NR+I
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTAD 184
HRD+K N+ + VK+ DFG A + + +++ GTP Y+APE++ ++ ++ D
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 185 LWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNR 244
+WS+G I+Y L VG+PPF T+ + I K+ P ++P S ++ +L P R
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 259
Query: 245 LTWSALLEHPF 255
T + LL F
Sbjct: 260 PTINELLNDEF 270
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 187
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 248 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 285
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 74
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 75 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 134
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 193
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 194 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 253
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 254 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 291
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 187
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 248 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 285
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + Y + + I+K +P++ P + ++ LL
Sbjct: 189 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 248
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 249 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 277
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 73
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 74 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 133
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 192
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 193 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 252
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 253 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 290
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 146/268 (54%), Gaps = 26/268 (9%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEML 69
+++G G GKV + + TGQ A+K + K+ +++ + Q +I+ +L
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQ------ASGGPHIVCIL 69
Query: 70 DSFESPQE----FCVVTEFAQG-ELFEILED--DKCLPEEQVQSIAKQLVRALHYLHSNR 122
D +E+ ++ E +G ELF +++ D+ E + I + + A+ +LHS+
Sbjct: 70 DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 129
Query: 123 IIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L + +V+KL DFGFA+ + N L++ TP Y+APE++ + Y
Sbjct: 130 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKY 187
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD----EMSPNFKS 231
+ + D+WSLGVI+Y L G PPFY+N+ A + R I +P+ E+S + K
Sbjct: 188 DKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQ 247
Query: 232 FLKGLLNKVPQNRLTWSALLEHPFVKET 259
++ LL P RLT + + HP++ ++
Sbjct: 248 LIRLLLKTDPTERLTITQFMNHPWINQS 275
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 151/278 (54%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 72
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 73 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 132
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 191
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
PE++ + Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 192 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 251
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 252 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 289
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 143/279 (51%), Gaps = 20/279 (7%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEIL-RKLK 61
+ Y V E +G GS+ + K T A+K I KS++D +EIEIL R +
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII---DKSKRDP---TEEIEILLRYGQ 74
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H NII + D ++ + VVTE +G EL + + K E + ++ + + + YLH+
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 121 NRIIHRDMKPQNILI----GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
++HRD+KP NIL G +++CDFGFA+ + A +L + T ++APE++
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER 194
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYT---NSVYALIRHIVKDPVK----YPDEMSPNF 229
Q Y+ D+WSLGV+LY + G PF ++ ++ I Y + +S
Sbjct: 195 QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA 254
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAWEL 268
K + +L+ P RLT + +L HP++ D+L ++L
Sbjct: 255 KDLVSKMLHVDPHQRLTAALVLRHPWIVHW-DQLPQYQL 292
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 123/244 (50%), Gaps = 3/244 (1%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGK-SEKDIHNLRQEIEILRKLKHQ 63
+++ + ++G+GSFGKV RK T + A+K + K + D+ E +L L
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 64 NIIEMLDS-FESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+ L S F++ V E+ G +L ++ E Q A ++ L +LH
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNH 181
II+RD+K N+++ + +K+ DFG + + V R GTP Y+APE++ QPY
Sbjct: 140 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGK 199
Query: 182 TADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVP 241
+ D W+ GV+LYE+ GQPPF L + I++ V YP +S S KGL+ K P
Sbjct: 200 SVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHP 259
Query: 242 QNRL 245
RL
Sbjct: 260 AKRL 263
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 141/275 (51%), Gaps = 18/275 (6%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-GKSEKDIHNLRQEIEILRK 59
+G++++ ++ ++G GS+ KV R K T + AMK + K ++DI ++ E + +
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 60 L-KHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
H ++ + F++ V E+ G +L ++ + LPEE + + ++ AL+Y
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
LH II+RD+K N+L+ + +KL D+G + GTP Y+APE++R +
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 178 PYNHTADLWSLGVILYELFVGQPPF---------YTNSVYALIRHIVKDPVKYPDEMSPN 228
Y + D W+LGV+++E+ G+ PF N+ L + I++ ++ P MS
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVK 256
Query: 229 FKSFLKGLLNKVPQNRL------TWSALLEHPFVK 257
S LK LNK P+ RL ++ + HPF +
Sbjct: 257 AASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 137/271 (50%), Gaps = 20/271 (7%)
Query: 3 VENYHVIELVGEGSFGKVYK-------GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIE 55
+ Y + +L+GEGS+GKV + RR + +G++ N+++EI+
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEA-----NVKKEIQ 58
Query: 56 ILRKLKHQNIIEMLDSF--ESPQEFCVVTEFAQGELFEILED--DKCLPEEQVQSIAKQL 111
+LR+L+H+N+I+++D E Q+ +V E+ + E+L+ +K P Q QL
Sbjct: 59 LLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQL 118
Query: 112 VRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYM 169
+ L YLHS I+H+D+KP N+L+ G +K+ G A A+ A R+ +G+P +
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 170 APELVR--EQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSP 227
PE+ + D+WS GV LY + G PF +++Y L +I K P + P
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGP 238
Query: 228 NFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
LKG+L P R + + +H + ++
Sbjct: 239 PLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 126 bits (316), Expect = 9e-29, Method: Composition-based stats.
Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 5/273 (1%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGK-SEKDIHNLRQEIEILR- 58
+ +E++ + +++G+GSFGKV+ K T Q A+K + K + D+ E +L
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+H + M +F++ + V E+ G +L ++ + A +++ L +
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
LHS I++RD+K NIL+ +K+ DFG + GTP Y+APE++ Q
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
YNH+ D WS GV+LYE+ +GQ PF+ L I D YP + K L L
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLF 253
Query: 238 NKVPQNRL-TWSALLEHPFVKETS-DELNAWEL 268
+ P+ RL + +HP +E + +EL E+
Sbjct: 254 VREPEKRLGVRGDIRQHPLFREINWEELERKEI 286
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 127/251 (50%), Gaps = 10/251 (3%)
Query: 11 LVGEGSFGKVYK-----GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+G+G F K ++ + + G+ V ++K + EK + EI I R L HQ++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 77
Query: 66 IEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ FE VV E + L E+ + K L E + + +Q+V YLH NR+I
Sbjct: 78 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 137
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTAD 184
HRD+K N+ + VK+ DFG A + + + + GTP Y+APE++ ++ ++ D
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 197
Query: 185 LWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNR 244
+WS+G I+Y L VG+PPF T+ + I K+ P ++P S ++ +L P R
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 257
Query: 245 LTWSALLEHPF 255
T + LL F
Sbjct: 258 PTINELLNDEF 268
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 127/251 (50%), Gaps = 10/251 (3%)
Query: 11 LVGEGSFGKVYK-----GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+G+G F K ++ + + G+ V ++K + EK + EI I R L HQ++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 101
Query: 66 IEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ FE VV E + L E+ + K L E + + +Q+V YLH NR+I
Sbjct: 102 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 161
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTAD 184
HRD+K N+ + VK+ DFG A + + + + GTP Y+APE++ ++ ++ D
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 221
Query: 185 LWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNR 244
+WS+G I+Y L VG+PPF T+ + I K+ P ++P S ++ +L P R
Sbjct: 222 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 281
Query: 245 LTWSALLEHPF 255
T + LL F
Sbjct: 282 PTINELLNDEF 292
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 127/251 (50%), Gaps = 10/251 (3%)
Query: 11 LVGEGSFGKVYK-----GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+G+G F K ++ + + G+ V ++K + EK + EI I R L HQ++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 103
Query: 66 IEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ FE VV E + L E+ + K L E + + +Q+V YLH NR+I
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 163
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTAD 184
HRD+K N+ + VK+ DFG A + + + + GTP Y+APE++ ++ ++ D
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 223
Query: 185 LWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNR 244
+WS+G I+Y L VG+PPF T+ + I K+ P ++P S ++ +L P R
Sbjct: 224 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 283
Query: 245 LTWSALLEHPF 255
T + LL F
Sbjct: 284 PTINELLNDEF 294
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 43/280 (15%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEIL-RKLKH 62
+ Y V E +G GS+ + + K T A+K I KS++D +EIEIL R +H
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI---DKSKRDP---SEEIEILLRYGQH 80
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NII + D ++ + +VTE +G EL + + K E + + + + + YLHS
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 122 RIIHRDMKPQNILI----GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
++HRD+KP NIL G +++CDFGFA+ + A +L + T ++APE+++ Q
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM------------ 225
Y+ D+WSLG++LY + G PF P P+E+
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPF------------ANGPSDTPEEILTRIGSGKFTLS 248
Query: 226 -------SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S K + +L+ P RLT +L+HP+V +
Sbjct: 249 GGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 43/280 (15%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEIL-RKLKH 62
+ Y V E +G GS+ + + K T A+K I KS++D +EIEIL R +H
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI---DKSKRDP---SEEIEILLRYGQH 80
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
NII + D ++ + +VTE +G EL + + K E + + + + + YLHS
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 122 RIIHRDMKPQNILI----GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
++HRD+KP NIL G +++CDFGFA+ + A +L + T ++APE+++ Q
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM------------ 225
Y+ D+WSLG++LY + G PF P P+E+
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPF------------ANGPSDTPEEILTRIGSGKFTLS 248
Query: 226 -------SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
S K + +L+ P RLT +L+HP+V +
Sbjct: 249 GGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 138/274 (50%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + + I+K +P++ P + ++ LL
Sbjct: 212 XKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 300
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 142/275 (51%), Gaps = 18/275 (6%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-GKSEKDIHNLRQEIEILRK 59
+G++++ ++ ++G GS+ KV R K T + AM+ + K ++DI ++ E + +
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 60 L-KHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
H ++ + F++ V E+ G +L ++ + LPEE + + ++ AL+Y
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
LH II+RD+K N+L+ + +KL D+G + + GTP Y+APE++R +
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 178 PYNHTADLWSLGVILYELFVGQPPF---------YTNSVYALIRHIVKDPVKYPDEMSPN 228
Y + D W+LGV+++E+ G+ PF N+ L + I++ ++ P +S
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK 288
Query: 229 FKSFLKGLLNKVPQNRL------TWSALLEHPFVK 257
S LK LNK P+ RL ++ + HPF +
Sbjct: 289 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 138/274 (50%), Gaps = 15/274 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKH 62
E++ +++GEGSF V R T + A+K + K H E + + +E +++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+++ +F+ ++ +A+ GEL + + E + ++V AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPLYMAPELVREQPY 179
IIHRD+KP+NIL+ +++ DFG A+ +S + R+ GT Y++PEL+ E+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
++DLW+LG I+Y+L G PPF + + I+K +P++ P + ++ LL
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 240 VPQNRL------TWSALLEHPFVKETSDELNAWE 267
RL + L HPF + + WE
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFESVT-----WE 300
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 141/279 (50%), Gaps = 20/279 (7%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEIL-RKLK 61
+ Y V E +G GS+ + K T A+K I KS++D +EIEIL R +
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKII---DKSKRDP---TEEIEILLRYGQ 74
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
H NII + D ++ + VVTE +G EL + + K E + ++ + + + YLH+
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 121 NRIIHRDMKPQNILI----GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
++HRD+KP NIL G +++CDFGFA+ + A +L + T ++APE++
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLER 194
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYT---NSVYALIRHIVKDPVK----YPDEMSPNF 229
Q Y+ D+WSLGV+LY G PF ++ ++ I Y + +S
Sbjct: 195 QGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA 254
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAWEL 268
K + L+ P RLT + +L HP++ D+L ++L
Sbjct: 255 KDLVSKXLHVDPHQRLTAALVLRHPWIVHW-DQLPQYQL 292
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 141/275 (51%), Gaps = 18/275 (6%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-GKSEKDIHNLRQEIEILRK 59
+G++++ ++ ++G GS+ KV R K T + AMK + K ++DI ++ E + +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 60 L-KHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
H ++ + F++ V E+ G +L ++ + LPEE + + ++ AL+Y
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
LH II+RD+K N+L+ + +KL D+G + GTP Y+APE++R +
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 178 PYNHTADLWSLGVILYELFVGQPPF---------YTNSVYALIRHIVKDPVKYPDEMSPN 228
Y + D W+LGV+++E+ G+ PF N+ L + I++ ++ P +S
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK 241
Query: 229 FKSFLKGLLNKVPQNRL------TWSALLEHPFVK 257
S LK LNK P+ RL ++ + HPF +
Sbjct: 242 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 21/265 (7%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLK-HQNIIEMLD 70
+GEGSF K K + Q A+K I K ++ N ++EI L+ + H NI+++ +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEA-----NTQKEITALKLCEGHPNIVKLHE 73
Query: 71 SFESP-QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMK 129
F F V+ GELFE ++ K E + I ++LV A+ ++H ++HRD+K
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLK 133
Query: 130 PQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLW 186
P+N+L + +K+ DFGFAR + L++ T Y APEL+ + Y+ + DLW
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLW 193
Query: 187 SLGVILYELFVGQPPFYTN-------SVYALIRHIVKDPVKYPDE----MSPNFKSFLKG 235
SLGVILY + GQ PF ++ S +++ I K + E +S K ++G
Sbjct: 194 SLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQG 253
Query: 236 LLNKVPQNRLTWSALLEHPFVKETS 260
LL P RL S L + ++++ S
Sbjct: 254 LLTVDPNKRLKMSGLRYNEWLQDGS 278
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 141/275 (51%), Gaps = 18/275 (6%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH-GKSEKDIHNLRQEIEILRK 59
+G++++ ++ ++G GS+ KV R K T + AMK + K ++DI ++ E + +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 60 L-KHQNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
H ++ + F++ V E+ G +L ++ + LPEE + + ++ AL+Y
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
LH II+RD+K N+L+ + +KL D+G + GTP Y+APE++R +
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 178 PYNHTADLWSLGVILYELFVGQPPF---------YTNSVYALIRHIVKDPVKYPDEMSPN 228
Y + D W+LGV+++E+ G+ PF N+ L + I++ ++ P +S
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK 245
Query: 229 FKSFLKGLLNKVPQNRL------TWSALLEHPFVK 257
S LK LNK P+ RL ++ + HPF +
Sbjct: 246 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 132/264 (50%), Gaps = 24/264 (9%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH-QNIIEMLD 70
+G G F V + K TGQ A KF+ K + + + EI +L K +I + +
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 71 SFESPQEFCVVTEFAQG-ELFEILEDDKCLPE-------EQVQSIAKQLVRALHYLHSNR 122
+E+ E ++ E+A G E+F + CLPE V + KQ++ ++YLH N
Sbjct: 97 VYENTSEIILILEYAAGGEIFSL-----CLPELAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 123 IIHRDMKPQNILIGA----GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP 178
I+H D+KPQNIL+ + G + K+ DFG +R + + LR I GTP Y+APE++ P
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDI-KIVDFGMSRKI-GHACELREIMGTPEYLAPEILNYDP 209
Query: 179 YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDE----MSPNFKSFLK 234
D+W++G+I Y L PF +I + V Y +E +S F++
Sbjct: 210 ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQ 269
Query: 235 GLLNKVPQNRLTWSALLEHPFVKE 258
LL K P+ R T L H ++++
Sbjct: 270 SLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 123 bits (308), Expect = 7e-28, Method: Composition-based stats.
Identities = 67/215 (31%), Positives = 117/215 (54%), Gaps = 4/215 (1%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFI-MKHGKSEKDIHNLRQEIEILRKLKH 62
E Y +++ +G G VY VA+K I + + E+ + +E+ +L H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
QNI+ M+D E + +V E+ +G L E +E L + + Q++ + + H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVV-LRSIKGTPLYMAPELVREQPYN 180
RI+HRD+KPQNILI + +K+ DFG A+A+S ++ + GT Y +PE + + +
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYAL-IRHI 214
D++S+G++LYE+ VG+PPF + ++ I+HI
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI 225
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 147/278 (52%), Gaps = 28/278 (10%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL-------QDCPKARREVELHWRAS 112
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGE 172
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +++ L + TP Y+A
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVA 231
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYAL----IRHIVKDPVKYPD--- 223
PE++ + Y+ + D WSLGVI Y L G PPFY+N A+ I ++P+
Sbjct: 232 PEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEW 291
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R T + HP++ +++
Sbjct: 292 SEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQST 329
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 121/217 (55%), Gaps = 13/217 (5%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFI-MKHGKSEKDIHNLRQEIEILRK 59
M Y + +G G++G VYK R ++G VA+K + + +G+ I +R E+ +LR+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRR 59
Query: 60 LK---HQNIIEMLD---SFESPQEFCV--VTEFAQGELFEILED--DKCLPEEQVQSIAK 109
L+ H N++ ++D + + +E V V E +L L+ LP E ++ + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYM 169
Q +R L +LH+N I+HRD+KP+NIL+ +G VKL DFG AR S + L + T Y
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALAPVVVTLWYR 178
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
APE++ + Y D+WS+G I E+F +P F NS
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 143/275 (52%), Gaps = 12/275 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + E +G G FG V++ + +T KF+ G + + ++EI IL +H+
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLV---KKEISILNIARHR 61
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSN 121
NI+ + +SFES +E ++ EF G ++FE + L E ++ S Q+ AL +LHS+
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 122 RIIHRDMKPQNILIGA--GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
I H D++P+NI+ S +K+ +FG AR + R + P Y APE+ +
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN-FRLLFTAPEYYAPEVHQHDVV 180
Query: 180 NHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPD----EMSPNFKSFLKG 235
+ D+WSLG ++Y L G PF + +I +I+ + + E+S F+
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
Query: 236 LLNKVPQNRLTWSALLEHPFVKETSDELNAWELRA 270
LL K ++R+T S L+HP++K+ + ++ +R
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQKIERVSTKVIRT 275
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 121/217 (55%), Gaps = 13/217 (5%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFI-MKHGKSEKDIHNLRQEIEILRK 59
M Y + +G G++G VYK R ++G VA+K + + +G+ I +R E+ +LR+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRR 59
Query: 60 LK---HQNIIEMLD---SFESPQEFCV--VTEFAQGELFEILED--DKCLPEEQVQSIAK 109
L+ H N++ ++D + + +E V V E +L L+ LP E ++ + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYM 169
Q +R L +LH+N I+HRD+KP+NIL+ +G VKL DFG AR S + L + T Y
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALDPVVVTLWYR 178
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
APE++ + Y D+WS+G I E+F +P F NS
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 130/260 (50%), Gaps = 21/260 (8%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE---KDIHNLRQEIEILRKLKHQNII 66
E++G G FGKVY R + G VA+K +H E + I N+RQE ++ LKH NII
Sbjct: 13 EIIGIGGFGKVY--RAFWIGDEVAVK-AARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 67 EMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR---I 123
+ C+V EFA+G + K +P + + + A Q+ R ++YLH I
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPI 129
Query: 124 IHRDMKPQNILI--------GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
IHRD+K NILI + ++K+ DFG AR T + S G +MAPE++R
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM--SAAGAYAWMAPEVIR 187
Query: 176 EQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--KDPVKYPDEMSPNFKSFL 233
++ +D+WS GV+L+EL G+ PF A+ + K + P F +
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLM 247
Query: 234 KGLLNKVPQNRLTWSALLEH 253
+ N P +R +++ +L+
Sbjct: 248 EDCWNPDPHSRPSFTNILDQ 267
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 121/217 (55%), Gaps = 13/217 (5%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFI-MKHGKSEKDIHNLRQEIEILRK 59
M Y + +G G++G VYK R ++G VA+K + + +G+ I +R E+ +LR+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRR 59
Query: 60 LK---HQNIIEMLD---SFESPQEFCV--VTEFAQGELFEILED--DKCLPEEQVQSIAK 109
L+ H N++ ++D + + +E V V E +L L+ LP E ++ + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYM 169
Q +R L +LH+N I+HRD+KP+NIL+ +G VKL DFG AR S + L + T Y
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALFPVVVTLWYR 178
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
APE++ + Y D+WS+G I E+F +P F NS
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 117/202 (57%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 28 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPE-EQVQSIAKQLVRALHYLHSNRIIH 125
+ +PQ +VT++ +G L+ L + E +++ IA+Q R + YLH+ IIH
Sbjct: 85 FMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPY 225
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 16 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 72
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPE-EQVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E +++ IA+Q R + YLH+ IIH
Sbjct: 73 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 131
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 192 FQSDVYAFGIVLYELMTGQLPY 213
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 131/258 (50%), Gaps = 14/258 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G+FG V+ + +G +K I K +S+ + + EIE+L+ L H NII++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINK-DRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 72 FESPQEFCVVTEFAQG-ELFEIL----EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHR 126
FE +V E +G EL E + K L E V + KQ++ AL Y HS ++H+
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHK 148
Query: 127 DMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
D+KP+NIL S +K+ DFG A ++ + GT LYMAPE+ + +
Sbjct: 149 DLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA-AGTALYMAPEVFK-RDVTFKC 206
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDE---MSPNFKSFLKGLLNKV 240
D+WS GV++Y L G PF S+ + + Y E ++P LK +L K
Sbjct: 207 DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKD 266
Query: 241 PQNRLTWSALLEHPFVKE 258
P+ R + + +L H + K+
Sbjct: 267 PERRPSAAQVLHHEWFKQ 284
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 12/260 (4%)
Query: 11 LVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
++G+G++G VY GR +A+K I + + + L +EI + + LKH+NI++ L
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE--RDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 71 SFESPQEFCVVTEFAQGELFEILEDDKCLP----EEQVQSIAKQLVRALHYLHSNRIIHR 126
SF + E G L K P E+ + KQ++ L YLH N+I+HR
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 127 DMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP--YNHTA 183
D+K N+LI S V+K+ DFG ++ ++ + GT YMAPE++ + P Y A
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 206
Query: 184 DLWSLGVILYELFVGQPPFYT--NSVYALIR-HIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLG + E+ G+PPFY A+ + + K + P+ MS K+F+
Sbjct: 207 DIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPD 266
Query: 241 PQNRLTWSALLEHPFVKETS 260
P R + LL F+K +S
Sbjct: 267 PDKRACANDLLVDEFLKVSS 286
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 28 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPE-EQVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E +++ IA+Q R + YLH+ IIH
Sbjct: 85 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPY 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 11 LVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
++G+G++G VY GR +A+K I + + + L +EI + + LKH+NI++ L
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE--RDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 71 SFESPQEFCVVTEFAQGELFEILEDDKCLP----EEQVQSIAKQLVRALHYLHSNRIIHR 126
SF + E G L K P E+ + KQ++ L YLH N+I+HR
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 127 DMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQP--YNHTA 183
D+K N+LI S V+K+ DFG ++ ++ + GT YMAPE++ + P Y A
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 192
Query: 184 DLWSLGVILYELFVGQPPFYT--NSVYALIR-HIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
D+WSLG + E+ G+PPFY A+ + + K + P+ MS K+F+
Sbjct: 193 DIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPD 252
Query: 241 PQNRLTWSALLEHPFVK 257
P R + LL F+K
Sbjct: 253 PDKRACANDLLVDEFLK 269
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 144/305 (47%), Gaps = 50/305 (16%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ + L+GEG++G V K TG+ VA+K I K + LR EI+IL+ KH+N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHEN 70
Query: 65 IIEML-----DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
II + DSFE+ E ++ E Q +L ++ + L ++ +Q Q +RA+ LH
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG----------TPLYM 169
+ +IHRD+KP N+LI + +K+CDFG AR + + G T Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 170 APE-LVREQPYNHTADLWSLGVILYELFVGQPPF----YTNS---VYALI---------- 211
APE ++ Y+ D+WS G IL ELF+ +P F Y + ++ +I
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 212 -------RHIVKDPVKYP--------DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFV 256
R +K YP ++P L+ +L P R+T LEHP++
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 257 KETSD 261
+ D
Sbjct: 310 QTYHD 314
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 144/305 (47%), Gaps = 50/305 (16%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ + L+GEG++G V K TG+ VA+K I K + LR EI+IL+ KH+N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHEN 70
Query: 65 IIEML-----DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
II + DSFE+ E ++ E Q +L ++ + L ++ +Q Q +RA+ LH
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG----------TPLYM 169
+ +IHRD+KP N+LI + +K+CDFG AR + + G T Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 170 APE-LVREQPYNHTADLWSLGVILYELFVGQPPF----YTNS---VYALI---------- 211
APE ++ Y+ D+WS G IL ELF+ +P F Y + ++ +I
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 212 -------RHIVKDPVKYP--------DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFV 256
R +K YP ++P L+ +L P R+T LEHP++
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 257 KETSD 261
+ D
Sbjct: 310 QTYHD 314
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 144/305 (47%), Gaps = 50/305 (16%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ + L+GEG++G V K TG+ VA+K I K + LR EI+IL+ KH+N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHEN 70
Query: 65 IIEML-----DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
II + DSFE+ E ++ E Q +L ++ + L ++ +Q Q +RA+ LH
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG----------TPLYM 169
+ +IHRD+KP N+LI + +K+CDFG AR + + G T Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 170 APE-LVREQPYNHTADLWSLGVILYELFVGQPPF----YTNS---VYALI---------- 211
APE ++ Y+ D+WS G IL ELF+ +P F Y + ++ +I
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 212 -------RHIVKDPVKYP--------DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFV 256
R +K YP ++P L+ +L P R+T LEHP++
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 257 KETSD 261
+ D
Sbjct: 310 QTYHD 314
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 14/215 (6%)
Query: 4 ENYHVIELVGEGSFGKVYKGRR-KYTGQTVAMKFI-MKHGKSEKDIHNLRQEIEILRKLK 61
+ Y + +GEG++GKV+K R K G+ VA+K + ++ G+ + +R E+ +LR L+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLE 69
Query: 62 ---HQNIIEMLD-----SFESPQEFCVVTEFAQGELFEILED--DKCLPEEQVQSIAKQL 111
H N++ + D + + +V E +L L+ + +P E ++ + QL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 112 VRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
+R L +LHS+R++HRD+KPQNIL+ + +KL DFG AR S + L S+ T Y AP
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAP 188
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
E++ + Y DLWS+G I E+F +P F +S
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 14/215 (6%)
Query: 4 ENYHVIELVGEGSFGKVYKGRR-KYTGQTVAMKFI-MKHGKSEKDIHNLRQEIEILRKLK 61
+ Y + +GEG++GKV+K R K G+ VA+K + ++ G+ + +R E+ +LR L+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLE 69
Query: 62 ---HQNIIEMLD-----SFESPQEFCVVTEFAQGELFEILED--DKCLPEEQVQSIAKQL 111
H N++ + D + + +V E +L L+ + +P E ++ + QL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 112 VRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
+R L +LHS+R++HRD+KPQNIL+ + +KL DFG AR S + L S+ T Y AP
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAP 188
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
E++ + Y DLWS+G I E+F +P F +S
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 133/259 (51%), Gaps = 10/259 (3%)
Query: 3 VENYHVIELVGEGSFGKVYK-----GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEIL 57
++ Y +G+G F K Y+ + + G+ V ++K + EK + EI I
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIAIH 96
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALH 116
+ L + +++ FE VV E + L E+ + K + E + + +Q ++ +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
YLH+NR+IHRD+K N+ + VK+ DFG A + + +++ GTP Y+APE++ +
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCK 216
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGL 236
+ ++ D+WSLG ILY L VG+PPF T+ + I K+ P ++P + ++ +
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRM 276
Query: 237 LNKVPQNRLTWSALLEHPF 255
L+ P R + + LL F
Sbjct: 277 LHADPTLRPSVAELLTDEF 295
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 14/215 (6%)
Query: 4 ENYHVIELVGEGSFGKVYKGRR-KYTGQTVAMKFI-MKHGKSEKDIHNLRQEIEILRKLK 61
+ Y + +GEG++GKV+K R K G+ VA+K + ++ G+ + +R E+ +LR L+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLE 69
Query: 62 ---HQNIIEMLD-----SFESPQEFCVVTEFAQGELFEILED--DKCLPEEQVQSIAKQL 111
H N++ + D + + +V E +L L+ + +P E ++ + QL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 112 VRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAP 171
+R L +LHS+R++HRD+KPQNIL+ + +KL DFG AR S + L S+ T Y AP
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAP 188
Query: 172 ELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
E++ + Y DLWS+G I E+F +P F +S
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 132/259 (50%), Gaps = 10/259 (3%)
Query: 3 VENYHVIELVGEGSFGKVYK-----GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEIL 57
++ Y +G+G F K Y+ + + G+ V ++K + EK + EI I
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIAIH 96
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALH 116
+ L + +++ FE VV E + L E+ + K + E + + +Q ++ +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
YLH+NR+IHRD+K N+ + VK+ DFG A + + + + GTP Y+APE++ +
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 216
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGL 236
+ ++ D+WSLG ILY L VG+PPF T+ + I K+ P ++P + ++ +
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRM 276
Query: 237 LNKVPQNRLTWSALLEHPF 255
L+ P R + + LL F
Sbjct: 277 LHADPTLRPSVAELLTDEF 295
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 132/259 (50%), Gaps = 10/259 (3%)
Query: 3 VENYHVIELVGEGSFGKVYK-----GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEIL 57
++ Y +G+G F K Y+ + + G+ V ++K + EK + EI I
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIAIH 96
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALH 116
+ L + +++ FE VV E + L E+ + K + E + + +Q ++ +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
YLH+NR+IHRD+K N+ + VK+ DFG A + + + + GTP Y+APE++ +
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCK 216
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGL 236
+ ++ D+WSLG ILY L VG+PPF T+ + I K+ P ++P + ++ +
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRM 276
Query: 237 LNKVPQNRLTWSALLEHPF 255
L+ P R + + LL F
Sbjct: 277 LHADPTLRPSVAELLTDEF 295
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 132/259 (50%), Gaps = 10/259 (3%)
Query: 3 VENYHVIELVGEGSFGKVYK-----GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEIL 57
++ Y +G+G F K Y+ + + G+ V ++K + EK + EI I
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIAIH 80
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEEQVQSIAKQLVRALH 116
+ L + +++ FE VV E + L E+ + K + E + + +Q ++ +
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
YLH+NR+IHRD+K N+ + VK+ DFG A + + + + GTP Y+APE++ +
Sbjct: 141 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGL 236
+ ++ D+WSLG ILY L VG+PPF T+ + I K+ P ++P + ++ +
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRM 260
Query: 237 LNKVPQNRLTWSALLEHPF 255
L+ P R + + LL F
Sbjct: 261 LHADPTLRPSVAELLTDEF 279
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 123/232 (53%), Gaps = 8/232 (3%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK-DIHNLRQEIEILRK 59
M E+Y V++++G G+FG+V R K T + AMK + K ++ D +E +I+
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
++++ +F+ + +V E+ G L + +PE+ + ++V AL +H
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVL-RSIKGTPLYMAPELVREQP 178
S IHRD+KP N+L+ +KL DFG M+ +V + GTP Y++PE+++ Q
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 179 ----YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--KDPVKYPDE 224
Y D WS+GV LYE+ VG PFY +S+ I+ K+ + +PD+
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD 302
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 123/232 (53%), Gaps = 8/232 (3%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK-DIHNLRQEIEILRK 59
M E+Y V++++G G+FG+V R K T + AMK + K ++ D +E +I+
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
++++ +F+ + +V E+ G L + +PE+ + ++V AL +H
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVL-RSIKGTPLYMAPELVREQP 178
S IHRD+KP N+L+ +KL DFG M+ +V + GTP Y++PE+++ Q
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 179 ----YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--KDPVKYPDE 224
Y D WS+GV LYE+ VG PFY +S+ I+ K+ + +PD+
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD 302
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 123/232 (53%), Gaps = 8/232 (3%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK-DIHNLRQEIEILRK 59
M E+Y V++++G G+FG+V R K T + AMK + K ++ D +E +I+
Sbjct: 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 125
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
++++ +F+ + +V E+ G L + +PE+ + ++V AL +H
Sbjct: 126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH 185
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVL-RSIKGTPLYMAPELVREQP 178
S IHRD+KP N+L+ +KL DFG M+ +V + GTP Y++PE+++ Q
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 179 ----YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--KDPVKYPDE 224
Y D WS+GV LYE+ VG PFY +S+ I+ K+ + +PD+
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD 297
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 135/296 (45%), Gaps = 46/296 (15%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+ +E +G G++ VYKG K TG VA+K + K E +EI ++++LKH+NI
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAIREISLMKELKHENI 65
Query: 66 IEMLDSFESPQEFCVVTEFAQGELFEILED------DKCLPEEQVQSIAKQLVRALHYLH 119
+ + D + + +V EF +L + ++ + L V+ QL++ L + H
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQP 178
N+I+HRD+KPQN+LI +KL DFG ARA S T Y AP+ L+ +
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT 185
Query: 179 YNHTADLWSLGVILYELFVGQPPFY-TNSVYAL--------------------------- 210
Y+ + D+WS G IL E+ G+P F TN L
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPN 245
Query: 211 --------IRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
+R +++ K P + N FL GLL P RL+ L HP+ E
Sbjct: 246 IQQRPPRDLRQVLQPHTKEP--LDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 147/284 (51%), Gaps = 14/284 (4%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK-DIHNLRQEIEILRK 59
M E+Y V++++G G+FG+V R K + + AMK + K ++ D +E +I+
Sbjct: 72 MKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 131
Query: 60 LKHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
++++ +F+ + +V E+ G L + +PE+ + ++V AL +H
Sbjct: 132 ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVV-LRSIKGTPLYMAPELVREQP 178
S +IHRD+KP N+L+ +KL DFG M +V + GTP Y++PE+++ Q
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 179 ----YNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--KDPVKYPD--EMSPNFK 230
Y D WS+GV L+E+ VG PFY +S+ I+ K+ + +P+ E+S + K
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAK 311
Query: 231 SFLKGLLN--KVPQNRLTWSALLEHPFVKETSDELNAWELRATS 272
+ + L +V R + +HPF K +D+ N +R T+
Sbjct: 312 NLICAFLTDREVRLGRNGVEEIKQHPFFK--NDQWNWDNIRETA 353
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 136/260 (52%), Gaps = 14/260 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y +++ +G G+FG R K + + VA+K+I + EK N+++EI R L+H
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIDENVKREIINHRSLRHP 74
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+ + +P +V E+A G ELFE + + E++ + +QL+ + Y H+ +
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 123 IIHRDMKPQNILIGAGSV--VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+ HRD+K +N L+ +K+CDFG++++ ++ +S GTP Y+APE++ ++ Y+
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLLKKEYD 193
Query: 181 -HTADLWSLGVILYELFVGQPPFYT----NSVYALIRHIVKDPVKYPD--EMSPNFKSFL 233
AD+WS GV LY + VG PF + I I+ PD +SP + +
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 253
Query: 234 KGLLNKVPQNRLTWSALLEH 253
+ P R++ + H
Sbjct: 254 SRIFVADPAKRISIPEIRNH 273
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 16/264 (6%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK------DIHNLRQEIEIL 57
+ Y + +G G+FG V+ K + V +KFI K E + + EI IL
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTE-FAQG-ELFEILEDDKCLPEEQVQSIAKQLVRAL 115
+++H NII++LD FE+ F +V E G +LF ++ L E I +QLV A+
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
YL IIHRD+K +NI+I +KL DFG A + + + GT Y APE++
Sbjct: 144 GYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK-LFYTFCGTIEYCAPEVLM 202
Query: 176 EQPYNHTA-DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
PY ++WSLGV LY L + PF + V+ + P +S S +
Sbjct: 203 GNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETVEAAIHPPYLVSKELMSLVS 256
Query: 235 GLLNKVPQNRLTWSALLEHPFVKE 258
GLL VP+ R T L+ P+V +
Sbjct: 257 GLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 136/260 (52%), Gaps = 14/260 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y +++ +G G+FG R K + + VA+K+I + EK N+++EI R L+H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIAANVKREIINHRSLRHP 75
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+ + +P +V E+A G ELFE + + E++ + +QL+ + Y H+ +
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 123 IIHRDMKPQNILIGAGSV--VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+ HRD+K +N L+ +K+CDFG++++ ++ +S GTP Y+APE++ ++ Y+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLLKKEYD 194
Query: 181 -HTADLWSLGVILYELFVGQPPFYT----NSVYALIRHIVKDPVKYPD--EMSPNFKSFL 233
AD+WS GV LY + VG PF + I I+ PD +SP + +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 234 KGLLNKVPQNRLTWSALLEH 253
+ P R++ + H
Sbjct: 255 SRIFVADPAKRISIPEIRNH 274
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 3/216 (1%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
+E Y ++ +GEG++ VYKG+ K T VA+K I + +R E+ +L+ LKH
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKH 59
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILED-DKCLPEEQVQSIAKQLVRALHYLHSN 121
NI+ + D + + +V E+ +L + L+D + V+ QL+R L Y H
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQPYN 180
+++HRD+KPQN+LI +KL DFG ARA S T + T Y P+ L+ Y+
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK 216
D+W +G I YE+ G+P F ++V + I +
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR 215
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 117/220 (53%), Gaps = 16/220 (7%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK----DIHNLRQEIEI 56
M Y + +G G++G VYK R ++G VA+K + I +R E+ +
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR-EVAL 64
Query: 57 LRKLK---HQNIIEMLD---SFESPQEFCV--VTEFAQGELFEILED--DKCLPEEQVQS 106
LR+L+ H N++ ++D + + +E V V E +L L+ LP E ++
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 124
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTP 166
+ +Q +R L +LH+N I+HRD+KP+NIL+ +G VKL DFG AR S + L + T
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-MALTPVVVTL 183
Query: 167 LYMAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
Y APE++ + Y D+WS+G I E+F +P F NS
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 223
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 5/202 (2%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFI-MKHGKSEKDIHNLR--QEIEILRKL 60
+ Y ++ +GEG F VYK R K T Q VA+K I + H KD N +EI++L++L
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 61 KHQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLH 119
H NII +LD+F +V +F + +L I++D+ L +++ ++ L YLH
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV-REQP 178
+ I+HRD+KP N+L+ V+KL DFG A++ + T Y APEL+ +
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM 189
Query: 179 YNHTADLWSLGVILYELFVGQP 200
Y D+W++G IL EL + P
Sbjct: 190 YGVGVDMWAVGCILAELLLRVP 211
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGK-SEKDIHNLRQEIEILRK 59
M + +++ + ++G+GSFGKV RK T + A+K + K + D+ E +L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 60 LKHQNIIEMLDS-FESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+ L S F++ V E+ G +L ++ E A ++ L +
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
L S II+RD+K N+++ + +K+ DFG + + V + GTP Y+APE++ Q
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
PY + D W+ GV+LYE+ GQ PF L + I++ V YP MS + KGL+
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLM 577
Query: 238 NKVPQNRL 245
K P RL
Sbjct: 578 TKHPGKRL 585
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGK-SEKDIHNLRQEIEILRK 59
M + +++ + ++G+GSFGKV RK T + A+K + K + D+ E +L
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 60 LKHQNIIEMLDS-FESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+ L S F++ V E+ G +L ++ E A ++ L +
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ 177
L S II+RD+K N+++ + +K+ DFG + + V + GTP Y+APE++ Q
Sbjct: 137 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLL 237
PY + D W+ GV+LYE+ GQ PF L + I++ V YP MS + KGL+
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLM 256
Query: 238 NKVPQNRL 245
K P RL
Sbjct: 257 TKHPGKRL 264
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 136/260 (52%), Gaps = 14/260 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y ++ +G G+FG R K T + VA+K+I + ++ N+++EI R L+H
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE---NVQREIINHRSLRHP 76
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+ + +P ++ E+A G EL+E + + E++ + +QL+ + Y HS +
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 123 IIHRDMKPQNILIGAGSV--VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
I HRD+K +N L+ +K+CDFG++++ ++ +S GTP Y+APE++ Q Y+
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLLRQEYD 195
Query: 181 -HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD--PVKY--PDE--MSPNFKSFL 233
AD+WS GV LY + VG PF R ++ VKY PD+ +SP +
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLI 255
Query: 234 KGLLNKVPQNRLTWSALLEH 253
+ P R++ + H
Sbjct: 256 SRIFVADPATRISIPEIKTH 275
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 136/290 (46%), Gaps = 36/290 (12%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y +E +GEG++G V+K + + T + VA+K + E + +EI +L++LKH
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC---LPEEQVQSIAKQLVRALHYLH 119
+NI+ + D S ++ +V EF +L + D C L E V+S QL++ L + H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQP 178
S ++HRD+KPQN+LI +KL +FG ARA + T Y P+ L +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 179 YNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI---------------VKDPVKYP 222
Y+ + D+WS G I EL G+P F N V ++ I K P P
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 223 DEMSP--------------NFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
M P + L+ LL P R++ L+HP+ +
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 36/290 (12%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y +E +GEG++G V+K + + T + VA+K + E + +EI +L++LKH
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKC---LPEEQVQSIAKQLVRALHYLH 119
+NI+ + D S ++ +V EF +L + D C L E V+S QL++ L + H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQP 178
S ++HRD+KPQN+LI +KL DFG ARA + T Y P+ L +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 179 YNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI---------------VKDPVKYP 222
Y+ + D+WS G I EL +P F N V ++ I K P P
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 223 DEMSP--------------NFKSFLKGLLNKVPQNRLTWSALLEHPFVKE 258
M P + L+ LL P R++ L+HP+ +
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 141/289 (48%), Gaps = 38/289 (13%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLK-HQNIIEM 68
EL+GEG++ KV G+ A+K I K + + +E+E L + + ++NI+E+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS--RVFREVETLYQCQGNKNILEL 76
Query: 69 LDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
++ FE F +V E QG + ++ K E + + + + AL +LH+ I HRD
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRD 136
Query: 128 MKPQNILIGAG---SVVKLCDFGFARAMSAN-------TVVLRSIKGTPLYMAPELVR-- 175
+KP+NIL + S VK+CDF M N T L + G+ YMAPE+V
Sbjct: 137 LKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVF 196
Query: 176 -EQP--YNHTADLWSLGVILYELFVGQPPFYTN---------------SVYALIRHIVKD 217
+Q Y+ DLWSLGV+LY + G PPF + L I +
Sbjct: 197 TDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG 256
Query: 218 PVKYPDE----MSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
++PD+ +S K + LL + + RL+ + +L+HP+V+ + E
Sbjct: 257 KYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPE 305
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 112/198 (56%), Gaps = 11/198 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G GSFG VYKG K+ G VA+K + + + R E+ +LRK +H NI+ +
Sbjct: 44 IGSGSFGTVYKG--KWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMG 99
Query: 72 FESPQEFCVVTEFAQGE-LFEILE-DDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMK 129
+ + +VT++ +G L++ L + Q+ IA+Q + + YLH+ IIHRDMK
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMK 159
Query: 130 PQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYNHTAD 184
NI + G VK+ DFG A S + + + G+ L+MAPE++R Q P++ +D
Sbjct: 160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSD 219
Query: 185 LWSLGVILYELFVGQPPF 202
++S G++LYEL G+ P+
Sbjct: 220 VYSYGIVLYELMTGELPY 237
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 115/202 (56%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 12 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEE-QVQSIAKQLVRALHYLHSNRIIH 125
+ +PQ +VT++ +G L+ L + E ++ IA+Q + + YLH+ IIH
Sbjct: 69 FMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPY 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 17 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEE-QVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E ++ IA+Q + + YLH+ IIH
Sbjct: 74 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPY 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 14 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEE-QVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E ++ IA+Q + + YLH+ IIH
Sbjct: 71 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 129
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 190 FQSDVYAFGIVLYELMTGQLPY 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 39 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEE-QVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E ++ IA+Q + + YLH+ IIH
Sbjct: 96 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 154
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 215 FQSDVYAFGIVLYELMTGQLPY 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 17 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEE-QVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E ++ IA+Q + + YLH+ IIH
Sbjct: 74 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPY 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 40 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEE-QVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E ++ IA+Q + + YLH+ IIH
Sbjct: 97 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPY 237
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 12 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEE-QVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E ++ IA+Q + + YLH+ IIH
Sbjct: 69 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPY 209
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 32 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEE-QVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E ++ IA+Q + + YLH+ IIH
Sbjct: 89 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 147
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 208 FQSDVYAFGIVLYELMTGQLPY 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 40 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEE-QVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E ++ IA+Q + + YLH+ IIH
Sbjct: 97 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPY 237
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 135/260 (51%), Gaps = 14/260 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y +++ +G G+FG R K + + VA+K+I + EK N+++EI R L+H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIDENVKREIINHRSLRHP 75
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+ + +P +V E+A G ELFE + + E++ + +QL+ + Y H+ +
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 123 IIHRDMKPQNILIGAGSV--VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+ HRD+K +N L+ +K+C FG++++ ++ +S GTP Y+APE++ ++ Y+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP-KSTVGTPAYIAPEVLLKKEYD 194
Query: 181 -HTADLWSLGVILYELFVGQPPFYT----NSVYALIRHIVKDPVKYPD--EMSPNFKSFL 233
AD+WS GV LY + VG PF + I I+ PD +SP + +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 234 KGLLNKVPQNRLTWSALLEH 253
+ P R++ + H
Sbjct: 255 SRIFVADPAKRISIPEIRNH 274
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 139/300 (46%), Gaps = 42/300 (14%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y +IE +G G++G V RR+ TGQ VA+K I + +E++IL+ KH
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 64 NIIEMLD------SFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
NII + D + + VV + + +L +I+ + L E V+ QL+R L Y
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM----SANTVVLRSIKGTPLYMAPEL 173
+HS ++IHRD+KP N+L+ +K+ DFG AR + + + + T Y APEL
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 174 VRE-QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYA- 209
+ Y DLWS+G I E+ +G P P +V A
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 294
Query: 210 LIRHIVKD-PVKYP---DEMSPNFK----SFLKGLLNKVPQNRLTWSALLEHPFVKETSD 261
+R ++ P + P + + P S L +L P R++ +A L HPF+ + D
Sbjct: 295 RVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 354
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V + +G GSFG VYKG K+ G VA+K + + + + + E+ +LRK +H NI+
Sbjct: 12 VGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 68 MLDSFESPQEFCVVTEFAQGE-LFEILEDDKCLPEE-QVQSIAKQLVRALHYLHSNRIIH 125
+ PQ +VT++ +G L+ L + E ++ IA+Q + + YLH+ IIH
Sbjct: 69 FMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQ---PYN 180
RD+K NI + VK+ DFG A S + + + G+ L+MAPE++R Q PY+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 181 HTADLWSLGVILYELFVGQPPF 202
+D+++ G++LYEL GQ P+
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPY 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 139/300 (46%), Gaps = 42/300 (14%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y +IE +G G++G V RR+ TGQ VA+K I + +E++IL+ KH
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 64 NIIEMLD------SFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
NII + D + + VV + + +L +I+ + L E V+ QL+R L Y
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM----SANTVVLRSIKGTPLYMAPEL 173
+HS ++IHRD+KP N+L+ +K+ DFG AR + + + + T Y APEL
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 174 VRE-QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYA- 209
+ Y DLWS+G I E+ +G P P +V A
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 293
Query: 210 LIRHIVKD-PVKYP---DEMSPNFK----SFLKGLLNKVPQNRLTWSALLEHPFVKETSD 261
+R ++ P + P + + P S L +L P R++ +A L HPF+ + D
Sbjct: 294 RVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 23/264 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKLKHQNIIEMLD 70
+G G++G V K K +GQ +A+K I + EK+ L ++++ +R I++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 71 SFESPQEFCVVTEFAQGE-------LFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN-R 122
+ + + E ++ +L+D +PEE + I V+AL++L N +
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDD--VIPEEILGKITLATVKALNHLKENLK 146
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV----REQP 178
IIHRD+KP NIL+ +KLCDFG + + + R P YMAPE + Q
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRP-YMAPERIDPSASRQG 205
Query: 179 YNHTADLWSLGVILYELFVGQPPFYT-NSVYALIRHIVK-DPVKYPD----EMSPNFKSF 232
Y+ +D+WSLG+ LYEL G+ P+ NSV+ + +VK DP + + E SP+F +F
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINF 265
Query: 233 LKGLLNKVPQNRLTWSALLEHPFV 256
+ L K R + LL+HPF+
Sbjct: 266 VNLCLTKDESKRPKYKELLKHPFI 289
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 18/220 (8%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
V Y + +G+G+FG+V+K R + TGQ VA+K ++ + E +EI+IL+ LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 63 QNIIEMLD---SFESPQEFC-----VVTEFAQGELFEILEDDKC-LPEEQVQSIAKQLVR 113
+N++ +++ + SP C +V +F + +L +L + +++ + + L+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 114 ALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMS------ANTVVLRSIKGTPL 167
L+Y+H N+I+HRDMK N+LI V+KL DFG ARA S N R + T
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLW 194
Query: 168 YMAPE-LVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
Y PE L+ E+ Y DLW G I+ E++ P N+
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 134/260 (51%), Gaps = 14/260 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y +++ +G G+FG R K + VA+K+I + EK N+++EI R L+H
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYI---ERGEKIDENVKREIINHRSLRHP 75
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+ + +P +V E+A G ELFE + + E++ + +QL+ + Y H+ +
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 123 IIHRDMKPQNILIGAGSV--VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+ HRD+K +N L+ +K+ DFG+++A ++ +S GTP Y+APE++ ++ Y+
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP-KSAVGTPAYIAPEVLLKKEYD 194
Query: 181 -HTADLWSLGVILYELFVGQPPFYT----NSVYALIRHIVKDPVKYPD--EMSPNFKSFL 233
AD+WS GV LY + VG PF + I I+ PD +SP + +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 234 KGLLNKVPQNRLTWSALLEH 253
+ P R++ + H
Sbjct: 255 SRIFVADPAKRISIPEIRNH 274
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 18/220 (8%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
V Y + +G+G+FG+V+K R + TGQ VA+K ++ + E +EI+IL+ LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 63 QNIIEMLD---SFESPQEFC-----VVTEFAQGELFEILEDDKC-LPEEQVQSIAKQLVR 113
+N++ +++ + SP C +V +F + +L +L + +++ + + L+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 114 ALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMS------ANTVVLRSIKGTPL 167
L+Y+H N+I+HRDMK N+LI V+KL DFG ARA S N R + T
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLW 194
Query: 168 YMAPE-LVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
Y PE L+ E+ Y DLW G I+ E++ P N+
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 18/220 (8%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
V Y + +G+G+FG+V+K R + TGQ VA+K ++ + E +EI+IL+ LKH
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 63 QNIIEMLD---SFESPQEFC-----VVTEFAQGELFEILEDDKC-LPEEQVQSIAKQLVR 113
+N++ +++ + SP C +V +F + +L +L + +++ + + L+
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 135
Query: 114 ALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMS------ANTVVLRSIKGTPL 167
L+Y+H N+I+HRDMK N+LI V+KL DFG ARA S N R + T
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLW 193
Query: 168 YMAPE-LVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
Y PE L+ E+ Y DLW G I+ E++ P N+
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 233
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 135/260 (51%), Gaps = 14/260 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y +++ +G G+FG R K + + VA+K+I + EK N+++EI R L+H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIDENVKREIINHRSLRHP 75
Query: 64 NIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
NI+ + +P +V E+A G ELFE + + E++ + +QL+ + Y H+ +
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 123 IIHRDMKPQNILIGAGSV--VKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
+ HRD+K +N L+ +K+C FG++++ ++ ++ GTP Y+APE++ ++ Y+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV-GTPAYIAPEVLLKKEYD 194
Query: 181 -HTADLWSLGVILYELFVGQPPFYT----NSVYALIRHIVKDPVKYPD--EMSPNFKSFL 233
AD+WS GV LY + VG PF + I I+ PD +SP + +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 234 KGLLNKVPQNRLTWSALLEH 253
+ P R++ + H
Sbjct: 255 SRIFVADPAKRISIPEIRNH 274
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 18/220 (8%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
V Y + +G+G+FG+V+K R + TGQ VA+K ++ + E +EI+IL+ LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 63 QNIIEMLD---SFESPQEFC-----VVTEFAQGELFEILEDDKC-LPEEQVQSIAKQLVR 113
+N++ +++ + SP C +V +F + +L +L + +++ + + L+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 114 ALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMS------ANTVVLRSIKGTPL 167
L+Y+H N+I+HRDMK N+LI V+KL DFG ARA S N R + T
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLW 194
Query: 168 YMAPE-LVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
Y PE L+ E+ Y DLW G I+ E++ P N+
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 142/267 (53%), Gaps = 15/267 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKH 62
+++ I +G G+ G V+K K +G +A K I H + + I N + +E+++L +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNS 66
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYL-HS 120
I+ +F S E + E G L ++L+ +PE+ + ++ +++ L YL
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPLYMAPELVREQ 177
++I+HRD+KP NIL+ + +KLCDFG + + AN V GT YM+PE ++
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV-----GTRSYMSPERLQGT 181
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKD-PVKYPDEM-SPNFKSFLKG 235
Y+ +D+WS+G+ L E+ VG+ P +++ L+ +IV + P K P + S F+ F+
Sbjct: 182 HYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNK 241
Query: 236 LLNKVPQNRLTWSALLEHPFVKETSDE 262
L K P R L+ H F+K + E
Sbjct: 242 CLIKNPAERADLKQLMVHAFIKRSDAE 268
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 113 bits (283), Expect = 6e-25, Method: Composition-based stats.
Identities = 80/273 (29%), Positives = 141/273 (51%), Gaps = 15/273 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIH-NLRQEIEILRKLKH 62
+ Y + E++G G +V+ R + VA+K + + + R+E + L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 63 QNIIEMLDSFES-----PQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALH 116
I+ + D+ E+ P + +V E+ G L +I+ + + ++ + +AL+
Sbjct: 72 PAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVV-LRSIKGTPLYMAPEL 173
+ H N IIHRD+KP NILI A + VK+ DFG ARA+ S N+V ++ GT Y++PE
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNS-VYALIRHIVKDPV---KYPDEMSPNF 229
R + +D++SLG +LYE+ G+PPF +S V +H+ +DP+ + +S +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
+ + L K P+NR +A + V+ + E
Sbjct: 251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 144/271 (53%), Gaps = 19/271 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKH 62
+++ I +G G+ G V+K K +G +A K I H + + I N + +E+++L +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNS 82
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYL-HS 120
I+ +F S E + E G L ++L+ +PE+ + ++ +++ L YL
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPLYMAPELVREQ 177
++I+HRD+KP NIL+ + +KLCDFG + + AN+ V GT YM+PE ++
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMSPERLQGT 197
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNS----VYALIRHIVKD-PVKYPDEM-SPNFKS 231
Y+ +D+WS+G+ L E+ VG+ P + S ++ L+ +IV + P K P + S F+
Sbjct: 198 HYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQD 257
Query: 232 FLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
F+ L K P R L+ H F+K + E
Sbjct: 258 FVNKCLIKNPAERADLKQLMVHAFIKRSDAE 288
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 113 bits (282), Expect = 7e-25, Method: Composition-based stats.
Identities = 78/268 (29%), Positives = 139/268 (51%), Gaps = 15/268 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIH-NLRQEIEILRKLKH 62
+ Y + E++G G +V+ R + VA+K + + + R+E + L H
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 63 QNIIEMLDSFES-----PQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALH 116
I+ + D+ E+ P + +V E+ G L +I+ + + ++ + +AL+
Sbjct: 89 PAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 147
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVV-LRSIKGTPLYMAPEL 173
+ H N IIHRD+KP NI+I A + VK+ DFG ARA+ S N+V ++ GT Y++PE
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNS-VYALIRHIVKDPV---KYPDEMSPNF 229
R + +D++SLG +LYE+ G+PPF +S V +H+ +DP+ + +S +
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 267
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVK 257
+ + L K P+NR +A + V+
Sbjct: 268 DAVVLKALAKNPENRYQTAAEMRADLVR 295
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 112 bits (281), Expect = 9e-25, Method: Composition-based stats.
Identities = 79/273 (28%), Positives = 141/273 (51%), Gaps = 15/273 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIH-NLRQEIEILRKLKH 62
+ Y + E++G G +V+ R + VA+K + + + R+E + L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 63 QNIIEMLDSFES-----PQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALH 116
I+ + D+ E+ P + +V E+ G L +I+ + + ++ + +AL+
Sbjct: 72 PAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVV-LRSIKGTPLYMAPEL 173
+ H N IIHRD+KP NI+I A + VK+ DFG ARA+ S N+V ++ GT Y++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNS-VYALIRHIVKDPV---KYPDEMSPNF 229
R + +D++SLG +LYE+ G+PPF +S V +H+ +DP+ + +S +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
+ + L K P+NR +A + V+ + E
Sbjct: 251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 112 bits (280), Expect = 1e-24, Method: Composition-based stats.
Identities = 79/273 (28%), Positives = 141/273 (51%), Gaps = 15/273 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIH-NLRQEIEILRKLKH 62
+ Y + E++G G +V+ R + VA+K + + + R+E + L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 63 QNIIEMLDSFES-----PQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALH 116
I+ + D+ E+ P + +V E+ G L +I+ + + ++ + +AL+
Sbjct: 72 PAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVV-LRSIKGTPLYMAPEL 173
+ H N IIHRD+KP NI+I A + VK+ DFG ARA+ S N+V ++ GT Y++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNS-VYALIRHIVKDPV---KYPDEMSPNF 229
R + +D++SLG +LYE+ G+PPF +S V +H+ +DP+ + +S +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
+ + L K P+NR +A + V+ + E
Sbjct: 251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 139/279 (49%), Gaps = 24/279 (8%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN- 64
Y +++ +G G KV++ + Q A+K++ + + + R EI L KL+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 65 -IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
II + D + Q +V E +L L+ K + + +S K ++ A+H +H + I
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPYNH 181
+H D+KP N LI G ++KL DFG A M +T VV S GT YM PE +++ +
Sbjct: 177 VHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 182 -----------TADLWSLGVILYELFVGQPPFYT--NSVYALIRHIVKDP---VKYPDEM 225
+D+WSLG ILY + G+ PF N + L H + DP +++PD
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--HAIIDPNHEIEFPDIP 293
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
+ + LK L + P+ R++ LL HP+V+ + +N
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 139/279 (49%), Gaps = 24/279 (8%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN- 64
Y +++ +G G KV++ + Q A+K++ + + + R EI L KL+ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 65 -IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
II + D + Q +V E +L L+ K + + +S K ++ A+H +H + I
Sbjct: 73 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 132
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPYNH 181
+H D+KP N LI G ++KL DFG A M +T VV S GT YM PE +++ +
Sbjct: 133 VHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 191
Query: 182 -----------TADLWSLGVILYELFVGQPPFYT--NSVYALIRHIVKDP---VKYPDEM 225
+D+WSLG ILY + G+ PF N + L H + DP +++PD
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--HAIIDPNHEIEFPDIP 249
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
+ + LK L + P+ R++ LL HP+V+ + +N
Sbjct: 250 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 288
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 142/319 (44%), Gaps = 62/319 (19%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE------KDIHNLRQEIEIL 57
+ YH+ +G+GS+G V R QT A++ I K++ KD+ ++ E+ ++
Sbjct: 26 KKYHLKGAIGQGSYGVV---RVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLM 82
Query: 58 RKLKHQNIIEMLDSFESPQEFCVVTEFAQG----ELFEILEDD---KCL----------- 99
+KL H NI + + +E Q C+V E G + + DD KC
Sbjct: 83 KKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142
Query: 100 -----------------------PEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQNILIG 136
E+ + +I +Q+ ALHYLH+ I HRD+KP+N L
Sbjct: 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFS 202
Query: 137 AGSV--VKLCDFG----FARAMSANTVVLRSIKGTPLYMAPELVR--EQPYNHTADLWSL 188
+KL DFG F + + + + GTP ++APE++ + Y D WS
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262
Query: 189 GVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDE----MSPNFKSFLKGLLNKVPQNR 244
GV+L+ L +G PF + I ++ + + + +SP + L LLN+ R
Sbjct: 263 GVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDER 322
Query: 245 LTWSALLEHPFVKETSDEL 263
L+HP++ + SD++
Sbjct: 323 FDAMRALQHPWISQFSDKI 341
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 14/258 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G+ G+V+K R + TG +A+K + + G E++ L +L+ I++ +
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 72 FESPQEFCVVTEFAQGELFEILED--DKCLPEEQVQSIAKQLVRALHYLHSNR-IIHRDM 128
F + + + E G E L+ +PE + + +V+AL+YL +IHRD+
Sbjct: 93 FITNTDVFIAMEL-MGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDV 151
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV-----REQPYNHTA 183
KP NIL+ +KLCDFG + + + RS G YMAPE + + Y+ A
Sbjct: 152 KPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA-GCAAYMAPERIDPPDPTKPDYDIRA 210
Query: 184 DLWSLGVILYELFVGQPPFYT--NSVYALIRHIVKDPVKYPDEM--SPNFKSFLKGLLNK 239
D+WSLG+ L EL GQ P+ L + + ++P P M S +F+SF+K L K
Sbjct: 211 DVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTK 270
Query: 240 VPQNRLTWSALLEHPFVK 257
+ R ++ LLEH F+K
Sbjct: 271 DHRKRPKYNKLLEHSFIK 288
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 139/279 (49%), Gaps = 24/279 (8%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN- 64
Y +++ +G G KV++ + Q A+K++ + + + R EI L KL+ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 65 -IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
II + D + Q +V E +L L+ K + + +S K ++ A+H +H + I
Sbjct: 69 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 128
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPYNH 181
+H D+KP N LI G ++KL DFG A M +T VV S GT YM PE +++ +
Sbjct: 129 VHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 187
Query: 182 -----------TADLWSLGVILYELFVGQPPFYT--NSVYALIRHIVKDP---VKYPDEM 225
+D+WSLG ILY + G+ PF N + L H + DP +++PD
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--HAIIDPNHEIEFPDIP 245
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
+ + LK L + P+ R++ LL HP+V+ + +N
Sbjct: 246 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 284
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 140/281 (49%), Gaps = 28/281 (9%)
Query: 6 YHVIELVGEGSFGKVYK--GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
Y +++ +G G KV++ +K Q A+K++ + + + R EI L KL+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK---QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 64 N--IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+ II + D + Q +V E +L L+ K + + +S K ++ A+H +H +
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I+H D+KP N LI G ++KL DFG A M +T VV S GT YM PE +++
Sbjct: 175 GIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 180 NH-----------TADLWSLGVILYELFVGQPPFYT--NSVYALIRHIVKDP---VKYPD 223
+ +D+WSLG ILY + G+ PF N + L H + DP +++PD
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--HAIIDPNHEIEFPD 291
Query: 224 EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
+ + LK L + P+ R++ LL HP+V+ + +N
Sbjct: 292 IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 141/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 282 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 141/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 282 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 111 bits (278), Expect = 2e-24, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 137/263 (52%), Gaps = 18/263 (6%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKLK 61
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 62 H--QNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+ +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 118 LHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
H+ ++HRD+K +NILI +KL DFG + A+ +T V GT +Y PE +R
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT-VYTDFDGTRVYSPPEWIRY 183
Query: 177 QPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSXECQHLIRW 237
Query: 236 LLNKVPQNRLTWSALLEHPFVKE 258
L P +R T+ + HP++++
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 139/279 (49%), Gaps = 24/279 (8%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN- 64
Y +++ +G G KV++ + Q A+K++ + + + R EI L KL+ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 65 -IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
II + D + Q +V E +L L+ K + + +S K ++ A+H +H + I
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 129
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPYNH 181
+H D+KP N LI G ++KL DFG A M +T VV S GT YM PE +++ +
Sbjct: 130 VHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 188
Query: 182 -----------TADLWSLGVILYELFVGQPPFYT--NSVYALIRHIVKDP---VKYPDEM 225
+D+WSLG ILY + G+ PF N + L H + DP +++PD
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--HAIIDPNHEIEFPDIP 246
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
+ + LK L + P+ R++ LL HP+V+ + +N
Sbjct: 247 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 285
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 139/279 (49%), Gaps = 24/279 (8%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN- 64
Y +++ +G G KV++ + Q A+K++ + + + R EI L KL+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 65 -IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
II + D + Q +V E +L L+ K + + +S K ++ A+H +H + I
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPYNH 181
+H D+KP N LI G ++KL DFG A M +T VV S GT YM PE +++ +
Sbjct: 149 VHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 182 -----------TADLWSLGVILYELFVGQPPFYT--NSVYALIRHIVKDP---VKYPDEM 225
+D+WSLG ILY + G+ PF N + L H + DP +++PD
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--HAIIDPNHEIEFPDIP 265
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
+ + LK L + P+ R++ LL HP+V+ + +N
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 141/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 282 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 141/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 282 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 137/263 (52%), Gaps = 18/263 (6%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKLK 61
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 62 H--QNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+ +
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 118 LHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
H+ ++HRD+K +NILI +KL DFG + A+ +T V GT +Y PE +R
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT-VYTDFDGTRVYSPPEWIRY 187
Query: 177 QPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRW 241
Query: 236 LLNKVPQNRLTWSALLEHPFVKE 258
L P +R T+ + HP++++
Sbjct: 242 CLALRPSDRPTFEEIQNHPWMQD 264
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 137/263 (52%), Gaps = 18/263 (6%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKLK 61
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 62 H--QNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+ +
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 118 LHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
H+ ++HRD+K +NILI +KL DFG + A+ +T V GT +Y PE +R
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT-VYTDFDGTRVYSPPEWIRY 186
Query: 177 QPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 187 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRW 240
Query: 236 LLNKVPQNRLTWSALLEHPFVKE 258
L P +R T+ + HP++++
Sbjct: 241 CLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 137/263 (52%), Gaps = 18/263 (6%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKLK 61
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 62 H--QNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+ +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 118 LHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
H+ ++HRD+K +NILI +KL DFG + A+ +T V GT +Y PE +R
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT-VYTDFDGTRVYSPPEWIRY 183
Query: 177 QPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRW 237
Query: 236 LLNKVPQNRLTWSALLEHPFVKE 258
L P +R T+ + HP++++
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 78/273 (28%), Positives = 142/273 (52%), Gaps = 15/273 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIH-NLRQEIEILRKLKH 62
+ Y + E++G G +V+ R + VA+K + + + R+E + L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 63 QNIIEMLDSFES-----PQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALH 116
I+ + D+ E+ P + +V E+ G L +I+ + + ++ + +AL+
Sbjct: 72 PAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVV-LRSIKGTPLYMAPEL 173
+ H N IIHRD+KP NI+I A + VK+ DFG ARA+ S N+V ++ GT Y++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYAL-IRHIVKDPV---KYPDEMSPNF 229
R + +D++SLG +LYE+ G+PPF +S ++ +H+ +DP+ + +S +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADL 250
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
+ + L K P+NR +A + V+ + E
Sbjct: 251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 132/252 (52%), Gaps = 39/252 (15%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ GK+ K+ +E++I+RKL H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKN-----RELQIMRKLDHCN 74
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 185
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 222 P-DEMSPNFKSF 232
EM+PN+ F
Sbjct: 246 QIREMNPNYTEF 257
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 147
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 267
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 327
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 328 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 357
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 93
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 154 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 213
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 214 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 273
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 274 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 303
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 90
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 151 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 210
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 211 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 270
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 271 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 88
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 149 CTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 208
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 209 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 268
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 269 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 298
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 141/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+++ DFG AR ++ ++ G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL 221
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 282 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ + G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRL 221
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 282 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 79
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSYICS 190
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 250
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 251 QIREMNPNYTEF------KFPQ-------IKAHPWTK 274
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 153
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSYICS 264
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 324
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 325 QIREMNPNYTEF------KFPQ-------IKAHPWTK 348
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 108
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSYICS 219
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 280 QIREMNPNYTEF------KFPQ-------IKAHPWTK 303
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 140/277 (50%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ GK+ K+ +E++I+RKL H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKN-----RELQIMRKLDHCN 74
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSYICS 185
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 246 QIREMNPNYTEF------KFPQ-------IKAHPWTK 269
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 108
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 219
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 280 QIREMNPNYTEF------KFPQ-------IKAHPWTK 303
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 102
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSYICS 213
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 273
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 274 QIREMNPNYTEF------KFPQ-------IKAHPWTK 297
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 6 YHVIELVGEGSFGKVYK--GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
Y +++ +G G KV++ +K Q A+K++ + + + R EI L KL+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK---QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 64 N--IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+ II + D + Q +V E +L L+ K + + +S K ++ A+H +H +
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I+H D+KP N LI G ++KL DFG A M +T VV S G YM PE +++
Sbjct: 175 GIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 180 NH-----------TADLWSLGVILYELFVGQPPFYT--NSVYALIRHIVKDP---VKYPD 223
+ +D+WSLG ILY + G+ PF N + L H + DP +++PD
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--HAIIDPNHEIEFPD 291
Query: 224 EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
+ + LK L + P+ R++ LL HP+V+ + +N
Sbjct: 292 IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 110
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSYICS 221
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 281
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 282 QIREMNPNYTEF------KFPQ-------IKAHPWTK 305
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 112
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSYICS 223
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 283
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 284 QIREMNPNYTEF------KFPQ-------IKAHPWTK 307
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 141/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + TVA+K ++K +E+D+ +L E+E+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEEDLSDLVSEMEMMKMIGKHK 101
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ E+A +G L E L D +PEEQ+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 282 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 132/252 (52%), Gaps = 39/252 (15%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ GK+ K+ +E++I+RKL H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKN-----RELQIMRKLDHCN 74
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSYICS 185
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 222 P-DEMSPNFKSF 232
EM+PN+ F
Sbjct: 246 QIREMNPNYTEF 257
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 109 bits (273), Expect = 7e-24, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 136/263 (51%), Gaps = 18/263 (6%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKLK 61
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 62 H--QNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+ +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 118 LHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
H+ ++HRD+K +NILI +KL DFG + A+ +T V GT +Y PE +R
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT-VYTDFDGTRVYSPPEWIRY 183
Query: 177 QPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
Y+ +A +WSLG++LY++ G PF + I+ V + +S + ++
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQRVSSECQHLIRW 237
Query: 236 LLNKVPQNRLTWSALLEHPFVKE 258
L P +R T+ + HP++++
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 229
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIR 283
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE----KDIHNLRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ + + E+ +L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 214
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIR 268
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 86
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 197
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 258 QIREMNPNYTEF------KFPQ-------IKAHPWTK 281
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE----KDIHNLRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ + + E+ +L+K+
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 234
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIR 288
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 289 WCLALRPSDRPTFEEIQNHPWMQDV 313
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 229
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIR 283
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 109 bits (272), Expect = 1e-23, Method: Composition-based stats.
Identities = 78/273 (28%), Positives = 140/273 (51%), Gaps = 15/273 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIH-NLRQEIEILRKLKH 62
+ Y + E++G G +V+ R + VA+K + + + R+E + L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 63 QNIIEMLDSFES-----PQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALH 116
I+ + + E+ P + +V E+ G L +I+ + + ++ + +AL+
Sbjct: 72 PAIVAVYATGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVV-LRSIKGTPLYMAPEL 173
+ H N IIHRD+KP NI+I A + VK+ DFG ARA+ S N+V ++ GT Y++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 174 VREQPYNHTADLWSLGVILYELFVGQPPFYTNS-VYALIRHIVKDPV---KYPDEMSPNF 229
R + +D++SLG +LYE+ G+PPF +S V +H+ +DP+ + +S +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 230 KSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
+ + L K P+NR +A + V+ + E
Sbjct: 251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ +A +G L E L D +PEEQ+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 282 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 86
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 197
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 258 QIREMNPNYTEF------KFPQ-------IKAHPWTK 281
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 93
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 204
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 264
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 265 QIREMNPNYTEF------KFPQ-------IKAHPWTK 288
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 87
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSYICS 198
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 258
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 259 QIREMNPNYTEF------KFPQ-------IKAHPWTK 282
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 82
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 193
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 253
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 254 QIREMNPNYTEF------KFPQ-------IKAHPWTK 277
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 138/279 (49%), Gaps = 24/279 (8%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN- 64
Y +++ +G G KV++ + Q A+K++ + + + R EI L KL+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 65 -IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
II + D + Q +V E +L L+ K + + +S K ++ A+H +H + I
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSAN--TVVLRSIKGTPLYMAPELVREQPYNH 181
+H D+KP N LI G ++KL DFG A M + VV S GT YM PE +++ +
Sbjct: 149 VHSDLKPANFLIVDG-MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 182 -----------TADLWSLGVILYELFVGQPPFYT--NSVYALIRHIVKDP---VKYPDEM 225
+D+WSLG ILY + G+ PF N + L H + DP +++PD
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--HAIIDPNHEIEFPDIP 265
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
+ + LK L + P+ R++ LL HP+V+ + +N
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE----KDIHNLRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ + + E+ +L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 202
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIR 256
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 128/244 (52%), Gaps = 18/244 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y ++ VG G++G V TG VA+K + + +SE +E+ +L+ ++H+N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 66 IEMLDSFESPQE-------FCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYL 118
I +LD F +P E F +V F +L ++++ +K L E+++Q + Q+++ L Y+
Sbjct: 87 IGLLDVF-TPDETLDDFTDFYLVMPFMGTDLGKLMKHEK-LGEDRIQFLVYQMLKGLRYI 144
Query: 119 HSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV-REQ 177
H+ IIHRD+KP N+ + +K+ DFG AR + + T Y APE++
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---MXGXVVTRWYRAPEVILNWM 201
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEM-----SPNFKSF 232
Y T D+WS+G I+ E+ G+ F + ++ I+K P E S K++
Sbjct: 202 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 261
Query: 233 LKGL 236
+KGL
Sbjct: 262 MKGL 265
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 109/208 (52%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 140
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + S +K+ DFG AR + T Y APE ++
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 197
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 109/208 (52%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 144
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + S +K+ DFG AR + T Y APE ++
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 201
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE----KDIHNLRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ + + E+ +L+K+
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQG--ELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 221
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIR 275
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 276 WCLALRPSDRPTFEEIQNHPWMQDV 300
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 201
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIR 255
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 201
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIR 255
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 202
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIR 256
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 257 WCLALRPXDRPTFEEIQNHPWMQDV 281
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 187
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIR 241
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 202
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIR 256
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + TVA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-MLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQ-----S 106
NII +L + V+ +A +G L E L D +PEEQ+ S
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
QL R + YL S + IHRD+ +N+L+ +V+K+ DFG AR ++ ++ G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+++E+F +G P+ V L + H + P
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 282 ANCTNELY----MMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 74
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 185
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 246 QIREMNPNYTEF------KFPQ-------IKAHPWTK 269
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCAKLTDDHVQFLIYQILRGL 134
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 191
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 187
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIR 241
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 75
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 186
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 246
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 247 QIREMNPNYTEF------KFPQ-------IKAHPWTK 270
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 74
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 185
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 246 QIREMNPNYTEF------KFPQ-------IKAHPWTK 269
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
N+I +LD F S +EF +VT +L I++ K L ++ VQ + Q++R L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKY 136
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVRE 176
+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAPEIMLNW 193
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 78
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 189
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 249
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 250 QIREMNPNYTEF------KFPQ-------IKAHPWTK 273
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 74
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSXICS 185
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 246 QIREMNPNYTEF------KFPQ-------IKAHPWTK 269
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 186
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIR 240
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 187
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIR 241
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 215
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I+ V + +S + ++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSSECQHLIR 269
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE----KDIHNLRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ + + E+ +L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 214
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I+ V + +S + ++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSSECQHLIR 268
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
N+I +LD F S +EF +VT +L I++ K L ++ VQ + Q++R L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK-LTDDHVQFLIYQILRGLKY 140
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVRE 176
+HS IIHRD+KP N+ + S +K+ DFG R + T Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE---MTGYVATRWYRAPEIMLNW 197
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
N+I +LD F S +EF +VT +L I++ K L ++ VQ + Q++R L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKY 136
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVRE 176
+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW 193
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 138/278 (49%), Gaps = 49/278 (17%)
Query: 3 VENYHVI-ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKL 60
+++Y V +++G G GKV + K T + A+K + +D R+E+E+ R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 61 KHQNIIEMLDSFES----PQEFCVVTE-FAQGELFEILED--DKCLPEEQVQSIAKQLVR 113
+ +I+ ++D +E+ + +V E GELF ++D D+ E + I K +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 114 ALHYLHSNRIIHRDMKPQNILIGA---GSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
A+ YLHS I HRD+KP+N+L + +++KL DFGFA+ +
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG---------------- 172
Query: 171 PELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYA----LIRHIVKDPVKYPD--- 223
+ Y+ + D+WSLGVI+Y L G PPFY+N A + I ++P+
Sbjct: 173 ------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 226
Query: 224 -EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETS 260
E+S K ++ LL P R+T + + HP++ +++
Sbjct: 227 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 64
Query: 63 QNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 52/277 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+Y +++G GSFG VY+ + +G+ VA+K +++ +K N +E++I+RKL H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCN 74
Query: 65 IIEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRA 114
I+ + F S E +V ++ ++ + + LP V+ QL R+
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTP------- 166
L Y+HS I HRD+KPQN+L+ + V+KLCDFG A+ + ++G P
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------VRGEPNVSYICS 185
Query: 167 -LYMAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK---DPVKY 221
Y APEL+ Y + D+WS G +L EL +GQP F +S + I+K P +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVK 257
EM+PN+ F K PQ + HP+ K
Sbjct: 246 QIREMNPNYTEF------KFPQ-------IKAHPWTK 269
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE----KDIHNLRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ + + E+ +L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 215
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I+ V + +S + ++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSXECQHLIR 269
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE----KDIHNLRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ + + E+ +L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 215
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I+ V + +S + ++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSSECQHLIR 269
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 214
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I+ V + +S + ++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSSECQHLIR 268
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 63
Query: 63 QNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 215
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I+ V + +S + ++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSXECQHLIR 269
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
N+I +LD F S +EF +VT +L I++ K L ++ VQ + Q++R L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQILRGLKY 140
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVRE 176
+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW 197
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE----KDIHNLRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ + + E+ +L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 214
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I+ V + +S + ++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSXECQHLIR 268
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 158
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MXGXVATRWYRAPEIML 215
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 64
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 64
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 64
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
N+I +LD F S +EF +VT +L I++ K L ++ VQ + Q++R L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQILRGLKY 140
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVRE 176
+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW 197
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 64
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + K +S +E+ +L+ +KH+
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 150
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 207
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 157
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 214
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 158
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 215
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 62
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSE-KDIHN---LRQEIEILRKL 60
Y V L+G G FG VY G R VA+K + K S+ ++ N + E+ +L+K+
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 61 K--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+I +LD FE P F ++ E + +LF+ + + L EE +S Q++ A+
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 151
Query: 117 YLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR 175
+ H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +Y PE +R
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRVYSPPEWIR 209
Query: 176 EQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLK 234
Y+ +A +WSLG++LY++ G PF + I++ V + +S + ++
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIR 263
Query: 235 GLLNKVPQNRLTWSALLEHPFVKET 259
L P +R T+ + HP++++
Sbjct: 264 WCLALRPSDRPTFEEIQNHPWMQDV 288
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 64
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 145
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + + T Y APE ++
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEIML 202
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 148
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 149 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 205
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 145
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + + T Y APE ++
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEIML 202
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 6/210 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y I +GEG++G+VYK T +TVA+K I + E +E+ +L++L+H
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
+NIIE+ ++ E+A+ +L + ++ + + ++S QL+ +++ HS R
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 123 IIHRDMKPQNILIGAGS-----VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVRE 176
+HRD+KPQN+L+ V+K+ DFG ARA T Y PE L+
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNS 206
+ Y+ + D+WS+ I E+ + P F +S
Sbjct: 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDS 242
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 33/266 (12%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLK-HQN 64
Y +++ +G+G++G V+K + TG+ VA+K I ++ D +EI IL +L H+N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 65 IIEMLDSF--ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR 122
I+ +L+ ++ ++ +V ++ + +L ++ + P + Q + QL++ + YLHS
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHK-QYVVYQLIKVIKYLHSGG 129
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFAR--------------AMSANTV-------VLRS 161
++HRDMKP NIL+ A VK+ DFG +R +++ NT +L
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 162 IKGTPLYMAPE-LVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVK 220
T Y APE L+ Y D+WSLG IL E+ G+P F +S + I+ +
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG-VID 248
Query: 221 YPDE------MSPNFKSFLKGLLNKV 240
+P SP K+ ++ L KV
Sbjct: 249 FPSNEDVESIQSPFAKTMIESLKEKV 274
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 144
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 201
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 145
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + + T Y APE ++
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEIML 202
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
N+I +LD F S +EF +VT +L I++ K L ++ VQ + Q++R L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKY 136
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVRE 176
+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW 193
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
N+I +LD F S +EF +VT +L I++ K L ++ VQ + Q++R L Y
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKY 138
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVRE 176
+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW 195
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 143
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 200
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 143/277 (51%), Gaps = 25/277 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKH 62
+++ I +G G+ G V+K K +G +A K I H + + I N + +E+++L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNS 63
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYL-HS 120
I+ +F S E + E G L ++L+ +PE+ + ++ +++ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPLYMAPELVREQ 177
++I+HRD+KP NIL+ + +KLCDFG + + AN+ V GT YM+PE ++
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMSPERLQGT 178
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTN----------SVYALIRHIVKD-PVKYPDEM- 225
Y+ +D+WS+G+ L E+ VG+ P +++ L+ +IV + P K P +
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVF 238
Query: 226 SPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
S F+ F+ L K P R L+ H F+K + E
Sbjct: 239 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 275
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGXVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 135
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 192
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 161
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MXGYVATRWYRAPEIML 218
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
N+I +LD F S +EF +VT +L I++ K L ++ VQ + Q++R L Y
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKY 137
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVRE 176
+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW 194
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 143
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 200
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 145
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 202
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 149
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 206
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 107 bits (266), Expect = 5e-23, Method: Composition-based stats.
Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 32/280 (11%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ IEL+G G FG+V+K + + G+T +K + + + + +E++ L KL H N
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE------REVKALAKLDHVN 65
Query: 65 IIEM---LDSFESPQE-------------FCVVTEFA-QGELFEILEDDKCLPEEQVQSI 107
I+ D F+ E + EF +G L + +E + ++V ++
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL 125
Query: 108 A--KQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT 165
+Q+ + + Y+HS ++I+RD+KP NI + VK+ DFG ++ + RS KGT
Sbjct: 126 ELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS-KGT 184
Query: 166 PLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
YM+PE + Q Y DL++LG+IL EL V F T+ + +R + D
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI-----ISDI 239
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
K+ L+ LL+K P++R S +L V + S E N
Sbjct: 240 FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 140
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 197
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 150
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 207
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 150
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 207
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 140
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 197
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 161
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 218
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 139/273 (50%), Gaps = 36/273 (13%)
Query: 12 VGEGSFGKVYKG------RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQN 64
+GEG+FG+V + K T ++K +EKD+ +L E+E+++ + KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 65 IIEMLDSFESPQEFCVVTEFA-QGELFEILEDDK------CL-----PEEQVQS-----I 107
II +L + V+ E+A +G L E L+ + C PEEQ+ S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-P 166
A Q+ R + YL S + IHRD+ +N+L+ +V+K+ DFG AR + ++ G P
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDPV 219
+ +MAPE + ++ Y H +D+WS GV+L+E+F +G P+ V L + H + P
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
Query: 220 KYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 276 NCTNELY----MMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 139/273 (50%), Gaps = 36/273 (13%)
Query: 12 VGEGSFGKVYKG------RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQN 64
+GEG+FG+V + K T ++K +EKD+ +L E+E+++ + KH+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 65 IIEMLDSFESPQEFCVVTEFA-QGELFEILEDDK------CL-----PEEQVQS-----I 107
II +L + V+ E+A +G L E L+ + C PEEQ+ S
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-P 166
A Q+ R + YL S + IHRD+ +N+L+ +V+K+ DFG AR + ++ G P
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 200
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDPV 219
+ +MAPE + ++ Y H +D+WS GV+L+E+F +G P+ V L + H + P
Sbjct: 201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 260
Query: 220 KYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 261 NCTNELY----MMMRDCWHAVPSQRPTFKQLVE 289
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 143
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 200
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 137
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 138 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 194
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 144
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 201
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 149
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 206
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
VG G++G V Q VA+K + + +S +E+ +L+ LKH+N+I +LD
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 72 F------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIH 125
F E E +VT +L I++ + L +E VQ + QL+R L Y+HS IIH
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKS-QALSDEHVQFLVYQLLRGLKYIHSAGIIH 154
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQPYNHTAD 184
RD+KP N+ + S +++ DFG AR + T Y APE ++ YN T D
Sbjct: 155 RDLKPSNVAVNEDSELRILDFGLARQADEE---MTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 185 LWSLGVILYELFVGQPPF 202
+WS+G I+ EL G+ F
Sbjct: 212 IWSVGCIMAELLQGKALF 229
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 157
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 214
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 140
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 197
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 114/204 (55%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG++G+V + T + VA+K I+ ++ N+++EI I L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINAMLNH 64
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 158
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 215
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + +G G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 143
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 200
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 144
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIML 201
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + VA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCL-----------PEEQVQS----- 106
NII +L + V+ E+A +G L E L+ + PEEQ+ S
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
A Q+ R + YL S + IHRD+ +N+L+ +V+K+ DFG AR + ++ G
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRL 214
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+L+E+F +G P+ V L + H + P
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 274
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 275 SNCTNELY----MMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 103/200 (51%), Gaps = 15/200 (7%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
VG G++G V Q VA+K + + +S +E+ +L+ LKH+N+I +LD
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 72 F------ESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHSNRI 123
F E E +VT +L I+ KC L +E VQ + QL+R L Y+HS I
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIV---KCQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQPYNHT 182
IHRD+KP N+ + S +++ DFG AR + T Y APE ++ YN T
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQADEE---MTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 183 ADLWSLGVILYELFVGQPPF 202
D+WS+G I+ EL G+ F
Sbjct: 210 VDIWSVGCIMAELLQGKALF 229
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ D+G AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 122/227 (53%), Gaps = 26/227 (11%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E + EL+G+G FG+VY GR + G+ VA++ I +E + ++E+ R+ +H+
Sbjct: 33 EQLEIGELIGKGRFGQVYHGR--WHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHE 89
Query: 64 NIIEMLDSFESPQEFCVVTEFAQGE-LFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSN 121
N++ + + SP ++T +G L+ ++ D K L + + IA+++V+ + YLH+
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVV--------LRSIKGTPLYMAPEL 173
I+H+D+K +N+ G VV + DFG S + V+ LR G ++APE+
Sbjct: 150 GILHKDLKSKNVFYDNGKVV-ITDFGL---FSISGVLQAGRREDKLRIQNGWLCHLAPEI 205
Query: 174 VRE---------QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALI 211
+R+ P++ +D+++LG I YEL + PF T A+I
Sbjct: 206 IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII 252
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 114/204 (55%), Gaps = 5/204 (2%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
VE++ +++ +GEG+ G+V + T + VA+K I+ ++ N+++EI I + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNH 63
Query: 63 QNIIEML-DSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
+N+++ E ++ + + GELF+ +E D +PE Q QL+ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLYMAPELVREQPY 179
I HRD+KP+N+L+ +K+ DFG A N +L + GT Y+APEL++ + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 180 N-HTADLWSLGVILYELFVGQPPF 202
+ D+WS G++L + G+ P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + VA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCL-----------PEEQVQS----- 106
NII +L + V+ E+A +G L E L+ + PEEQ+ S
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
A Q+ R + YL S + IHRD+ +N+L+ +V+K+ DFG AR + ++ G
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+L+E+F +G P+ V L + H + P
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 274
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 275 SNCTNELY----MMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + VA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIGKHK 86
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCL-----------PEEQVQS----- 106
NII +L + V+ E+A +G L E L+ + PEEQ+ S
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
A Q+ R + YL S + IHRD+ +N+L+ +V+K+ DFG AR + ++ G
Sbjct: 147 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 206
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+L+E+F +G P+ V L + H + P
Sbjct: 207 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 266
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 267 SNCTNELY----MMMRDCWHAVPSQRPTFKQLVE 296
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + VA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIGKHK 87
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCL-----------PEEQVQS----- 106
NII +L + V+ E+A +G L E L+ + PEEQ+ S
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
A Q+ R + YL S + IHRD+ +N+L+ +V+K+ DFG AR + ++ G
Sbjct: 148 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 207
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+L+E+F +G P+ V L + H + P
Sbjct: 208 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 267
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 268 SNCTNELY----MMMRDCWHAVPSQRPTFKQLVE 297
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 15/213 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+ + E +G G FG V + + TG+ VA+K + S K+ EI+I++KL H N+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 66 I---EMLDSFE--SPQEFCVVT-EFAQG-ELFEILED-DKC--LPEEQVQSIAKQLVRAL 115
+ E+ D + +P + ++ E+ +G +L + L + C L E ++++ + AL
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 116 HYLHSNRIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE 172
YLH NRIIHRD+KP+NI++ G + K+ D G+A+ + + + GT Y+APE
Sbjct: 135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV-GTLQYLAPE 193
Query: 173 LVREQPYNHTADLWSLGVILYELFVGQPPFYTN 205
L+ ++ Y T D WS G + +E G PF N
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 15/213 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+ + E +G G FG V + + TG+ VA+K + S K+ EI+I++KL H N+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 66 I---EMLDSFE--SPQEFCVVT-EFAQG-ELFEILED-DKC--LPEEQVQSIAKQLVRAL 115
+ E+ D + +P + ++ E+ +G +L + L + C L E ++++ + AL
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 116 HYLHSNRIIHRDMKPQNILIGAGS---VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE 172
YLH NRIIHRD+KP+NI++ G + K+ D G+A+ + + + GT Y+APE
Sbjct: 136 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV-GTLQYLAPE 194
Query: 173 LVREQPYNHTADLWSLGVILYELFVGQPPFYTN 205
L+ ++ Y T D WS G + +E G PF N
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + VA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIGKHK 135
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCL-----------PEEQVQS----- 106
NII +L + V+ E+A +G L E L+ + PEEQ+ S
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
A Q+ R + YL S + IHRD+ +N+L+ +V+K+ DFG AR + ++ G
Sbjct: 196 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 255
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+L+E+F +G P+ V L + H + P
Sbjct: 256 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 315
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 316 SNCTNELY----MMMRDCWHAVPSQRPTFKQLVE 345
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 138/273 (50%), Gaps = 36/273 (13%)
Query: 12 VGEGSFGKVYKG------RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQN 64
+GEG+FG+V + K T ++K +EKD+ +L E+E+++ + KH+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 65 IIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCL-----------PEEQVQS-----I 107
II +L + V+ E+A +G L E L+ + PEEQ+ S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-P 166
A Q+ R + YL S + IHRD+ +N+L+ +V+K+ DFG AR + ++ G P
Sbjct: 145 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 204
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDPV 219
+ +MAPE + ++ Y H +D+WS GV+L+E+F +G P+ V L + H + P
Sbjct: 205 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 264
Query: 220 KYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 265 NCTNELY----MMMRDCWHAVPSQRPTFKQLVE 293
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 105 bits (262), Expect = 2e-22, Method: Composition-based stats.
Identities = 84/298 (28%), Positives = 140/298 (46%), Gaps = 55/298 (18%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ IEL+G G FG+V+K + + G+T ++ + + + + +E++ L KL H N
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE------REVKALAKLDHVN 66
Query: 65 IIEML--------------DSFES----PQ-----------------EFCVVTEFAQGEL 89
I+ DS ES P+ EFC +G L
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFC-----DKGTL 121
Query: 90 FEILEDDKCLPEEQVQSIA--KQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFG 147
+ +E + ++V ++ +Q+ + + Y+HS ++IHRD+KP NI + VK+ DFG
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 148 FARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNS 206
++ + RS KGT YM+PE + Q Y DL++LG+IL EL V F T+
Sbjct: 182 LVTSLKNDGKRTRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK 240
Query: 207 VYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
+ +R + D K+ L+ LL+K P++R S +L V + S E N
Sbjct: 241 FFTDLRDGI-----ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 293
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 38/274 (13%)
Query: 12 VGEGSFGKVYKGR-------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQ 63
+GEG+FG+V + VA+K ++K +EKD+ +L E+E+++ + KH+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 64 NIIEMLDSFESPQEFCVVTEFA-QGELFEILE-----------DDKCLPEEQVQS----- 106
NII +L + V+ E+A +G L E L+ + PEEQ+ S
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT- 165
A Q+ R + YL S + IHRD+ +N+L+ +V+K+ DFG AR + ++ G
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 166 PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR-----HIVKDP 218
P+ +MAPE + ++ Y H +D+WS GV+L+E+F +G P+ V L + H + P
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 274
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
+E+ ++ + VP R T+ L+E
Sbjct: 275 SNCTNELY----MMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 12/212 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
VG G++G V K +G+ VA+K + + +SE +E+ +L+ ++H+N+I +LD
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 72 FESPQ------EFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIH 125
F +F +V F Q +L +I+ + EE++Q + Q+++ L Y+HS ++H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGME--FSEEKIQYLVYQMLKGLKYIHSAGVVH 167
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE-QPYNHTAD 184
RD+KP N+ + +K+ DFG AR A + T Y APE++ YN T D
Sbjct: 168 RDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVD 224
Query: 185 LWSLGVILYELFVGQPPFYTNSVYALIRHIVK 216
+WS+G I+ E+ G+ F + I+K
Sbjct: 225 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 256
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 11/214 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK-DIHNLRQEIEILRKLKH 62
E++ +I+++G G+FG+V + K T + AMK + K ++ + R+E ++L
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 63 QNIIEMLDSFESPQE-FCVVTEFAQGELFEILE--DDKCLPEEQVQSIAKQLVRALHYLH 119
Q I + +F+ + V+ + G+L +L +DK LPE+ + ++V A+ +H
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIH 208
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIK-GTPLYMAPELVREQP 178
+HRD+KP N+L+ ++L DFG M+ + V S+ GTP Y++PE+++
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 268
Query: 179 -----YNHTADLWSLGVILYELFVGQPPFYTNSV 207
Y D WSLGV +YE+ G+ PFY S+
Sbjct: 269 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 302
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 138/284 (48%), Gaps = 26/284 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
++Y + E++G G+ V + VA+K I K + + L +EI+ + + H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE-KCQTSMDELLKEIQAMSQCHHP 73
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGELFEILE--------DDKCLPEEQVQSIAKQLVRA 114
NI+ SF E +V + + G + +I++ L E + +I ++++
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR-----SIKGTPLYM 169
L YLH N IHRD+K NIL+G V++ DFG + ++ + R + GTP +M
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 170 APELVRE-QPYNHTADLWSLGVILYELFVGQPPFYTN-SVYALIRHIVKDP------VKY 221
APE++ + + Y+ AD+WS G+ EL G P++ + L+ + DP V+
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 253
Query: 222 PDEMSPNFKSFLKGL---LNKVPQNRLTWSALLEHPFVKETSDE 262
+ + KSF K + L K P+ R T + LL H F ++ ++
Sbjct: 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNK 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 11/214 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK-DIHNLRQEIEILRKLKH 62
E++ +I+++G G+FG+V + K T + AMK + K ++ + R+E ++L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 63 QNIIEMLDSFESPQE-FCVVTEFAQGELFEILE--DDKCLPEEQVQSIAKQLVRALHYLH 119
Q I + +F+ + V+ + G+L +L +DK LPE+ + ++V A+ +H
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIH 192
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIK-GTPLYMAPELVREQP 178
+HRD+KP N+L+ ++L DFG M+ + V S+ GTP Y++PE+++
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 252
Query: 179 -----YNHTADLWSLGVILYELFVGQPPFYTNSV 207
Y D WSLGV +YE+ G+ PFY S+
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 286
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ DF AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 26/280 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
++Y + E++G G+ V + VA+K I K + + L +EI+ + + H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE-KCQTSMDELLKEIQAMSQCHHP 68
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGELFEILE--------DDKCLPEEQVQSIAKQLVRA 114
NI+ SF E +V + + G + +I++ L E + +I ++++
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR-----SIKGTPLYM 169
L YLH N IHRD+K NIL+G V++ DFG + ++ + R + GTP +M
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 170 APELVRE-QPYNHTADLWSLGVILYELFVGQPPFYTN-SVYALIRHIVKDP------VKY 221
APE++ + + Y+ AD+WS G+ EL G P++ + L+ + DP V+
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 248
Query: 222 PDEMSPNFKSFLKGL---LNKVPQNRLTWSALLEHPFVKE 258
+ + KSF K + L K P+ R T + LL H F ++
Sbjct: 249 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
VG G++G V Q VA+K + + +S +E+ +L+ LKH+N+I +LD
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 72 F------ESPQEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHSNRI 123
F E E +VT +L I+ KC L +E VQ + QL+R L Y+HS I
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIV---KCQALSDEHVQFLVYQLLRGLKYIHSAGI 144
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVREQPYNHT 182
IHRD+KP N+ + +++ DFG AR + T Y APE ++ YN T
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLARQADEE---MTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 183 ADLWSLGVILYELFVGQPPF 202
D+WS+G I+ EL G+ F
Sbjct: 202 VDIWSVGCIMAELLQGKALF 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 12/212 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
VG G++G V K +G+ VA+K + + +SE +E+ +L+ ++H+N+I +LD
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 72 FESPQ------EFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIH 125
F +F +V F Q +L +I+ EE++Q + Q+++ L Y+HS ++H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIM--GLKFSEEKIQYLVYQMLKGLKYIHSAGVVH 149
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE-QPYNHTAD 184
RD+KP N+ + +K+ DFG AR A + T Y APE++ YN T D
Sbjct: 150 RDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVD 206
Query: 185 LWSLGVILYELFVGQPPFYTNSVYALIRHIVK 216
+WS+G I+ E+ G+ F + I+K
Sbjct: 207 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 238
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 140/271 (51%), Gaps = 22/271 (8%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK-DIHNLRQEIEILRKLKH 62
E++ +++++G G+FG+V + K + AMK + K ++ + R+E ++L
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 63 QNIIEMLDSFESPQE-FCVVTEFAQGELFEILE--DDKCLPEEQVQSIAKQLVRALHYLH 119
+ I + +F+ + V+ + G+L +L +D+ LPEE + ++V A+ +H
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVH 192
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIK-GTPLYMAPELVR--- 175
+HRD+KP NIL+ ++L DFG + + V S+ GTP Y++PE+++
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 176 --EQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--KDPVKYP---DEMSPN 228
+ Y D WSLGV +YE+ G+ PFY S+ I+ K+ ++P ++S N
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSEN 312
Query: 229 FKSFLKGLL----NKVPQNRLTWSALLEHPF 255
K ++ L+ +++ QN + +HPF
Sbjct: 313 AKDLIRRLICSREHRLGQNGI--EDFKKHPF 341
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ FG AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V +G +A+K + + +S +E+ +L+ +KH+
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 64 NIIEMLDSFE---SPQEF---CVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHY 117
N+I +LD F S +EF +VT +L I++ K L ++ VQ + Q++R L Y
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKY 169
Query: 118 LHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LVRE 176
+HS IIHRD+KP N+ + +K+ DFG AR + T Y APE ++
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW 226
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ D G AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 22/208 (10%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIH-NLRQEIEILRKLKHQ- 63
Y V++++G+GSFG+V K Q VA+K + ++EK H +EI IL L+ Q
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMV----RNEKRFHRQAAEEIRILEHLRKQD 154
Query: 64 -----NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK----CLPEEQVQSIAKQLVRA 114
N+I ML++F C+ E L+E+++ +K LP V+ A +++
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP--LVRKFAHSILQC 212
Query: 115 LHYLHSNRIIHRDMKPQNILIG--AGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE 172
L LH NRIIH D+KP+NIL+ S +K+ DFG + + V I+ + Y APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQ-SRFYRAPE 269
Query: 173 LVREQPYNHTADLWSLGVILYELFVGQP 200
++ Y D+WSLG IL EL G P
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ D G AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 22/208 (10%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIH-NLRQEIEILRKLKHQ- 63
Y V++++G+GSFG+V K Q VA+K + ++EK H +EI IL L+ Q
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMV----RNEKRFHRQAAEEIRILEHLRKQD 154
Query: 64 -----NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK----CLPEEQVQSIAKQLVRA 114
N+I ML++F C+ E L+E+++ +K LP V+ A +++
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP--LVRKFAHSILQC 212
Query: 115 LHYLHSNRIIHRDMKPQNILIG--AGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE 172
L LH NRIIH D+KP+NIL+ S +K+ DFG + + V I+ + Y APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQ-SRFYRAPE 269
Query: 173 LVREQPYNHTADLWSLGVILYELFVGQP 200
++ Y D+WSLG IL EL G P
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E Y + VG G++G V TG VA+K + + +S +E+ +L+ +KH+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 64 NIIEMLDSF---ESPQEF---CVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRAL 115
N+I +LD F S +EF +VT +L I+ KC L ++ VQ + Q++R L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGL 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE-LV 174
Y+HS IIHRD+KP N+ + +K+ D G AR + T Y APE ++
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE---MTGYVATRWYRAPEIML 195
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
YN T D+WS+G I+ EL G+ F
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLR-QEIEILRKLKHQ 63
+ ++G+G FG+V + + TG+ A K + K ++ + E +IL K+ +
Sbjct: 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 64 NIIEMLDSFESPQEFCVV-TEFAQGEL-FEILEDDKC-LPEEQVQSIAKQLVRALHYLHS 120
++ + ++E+ C+V T G+L F I + PE + A ++ L LH
Sbjct: 245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
RI++RD+KP+NIL+ +++ D G A + + + GT YMAPE+V+ + Y
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYT 363
Query: 181 HTADLWSLGVILYELFVGQPPFYTNS---VYALIRHIVKD-PVKYPDEMSPNFKSFLKGL 236
+ D W+LG +LYE+ GQ PF + +VK+ P +Y + SP +S L
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQL 423
Query: 237 LNKVPQNRL-----TWSALLEHPFVKE 258
L K P RL + + EHP K+
Sbjct: 424 LCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLR-QEIEILRKLKHQ 63
+ ++G+G FG+V + + TG+ A K + K ++ + E +IL K+ +
Sbjct: 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 64 NIIEMLDSFESPQEFCVV-TEFAQGEL-FEILEDDKC-LPEEQVQSIAKQLVRALHYLHS 120
++ + ++E+ C+V T G+L F I + PE + A ++ L LH
Sbjct: 245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN 180
RI++RD+KP+NIL+ +++ D G A + + + GT YMAPE+V+ + Y
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYT 363
Query: 181 HTADLWSLGVILYELFVGQPPFYTNS---VYALIRHIVKD-PVKYPDEMSPNFKSFLKGL 236
+ D W+LG +LYE+ GQ PF + +VK+ P +Y + SP +S L
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQL 423
Query: 237 LNKVPQNRL-----TWSALLEHPFVKE 258
L K P RL + + EHP K+
Sbjct: 424 LCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 11/219 (5%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y ++ +GEG++G V VA+K I LR EI+IL + +H+N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENV 103
Query: 66 IEMLD-----SFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D + E+ ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHS 162
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSA---NTVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+LI +K+CDFG AR +T L T Y APE ++
Sbjct: 163 ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 104/200 (52%), Gaps = 17/200 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFI--MKHGKSEKDIHNLRQEIEILRKLKHQNIIEML 69
+GEG FG VYKG T TVA+K + M +E+ QEI+++ K +H+N++E+L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 70 DSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQS------IAKQLVRALHYLHSNR 122
+ C+V + G L + L CL S IA+ +++LH N
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQPYN 180
IHRD+K NIL+ K+ DFG ARA A TV+ I GT YMAPE +R +
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE-IT 212
Query: 181 HTADLWSLGVILYELFVGQP 200
+D++S GV+L E+ G P
Sbjct: 213 PKSDIYSFGVVLLEIITGLP 232
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 48/299 (16%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYL 118
I + D +P ++ +V + + +L+++L KC L + + Q++R L Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KCQHLSNDHICYFLYQILRGLKYI 144
Query: 119 HSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LV 174
HS ++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 216 ---------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 265 RNYLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 142/275 (51%), Gaps = 22/275 (8%)
Query: 1 MGVENYHV-------IELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQE 53
+G +N+ V I +G G++G V K R +GQ +A+K I S++ L +
Sbjct: 41 IGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ-KRLLMD 99
Query: 54 IEI-LRKLKHQNIIEMLDSFESPQEFCVVTEFAQGEL----FEILEDDKCLPEEQVQSIA 108
++I +R + + + + + E L ++++ + +PE+ + IA
Sbjct: 100 LDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIA 159
Query: 109 KQLVRALHYLHSN-RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL 167
+V+AL +LHS +IHRD+KP N+LI A VK+CDFG + + ++V G
Sbjct: 160 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDSVAKTIDAGCKP 218
Query: 168 YMAPELV----REQPYNHTADLWSLGVILYELFVGQPPFYT-NSVYALIRHIVKDP-VKY 221
YMAPE + ++ Y+ +D+WSLG+ + EL + + P+ + + + ++ +V++P +
Sbjct: 219 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 278
Query: 222 P-DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPF 255
P D+ S F F L K + R T+ L++HPF
Sbjct: 279 PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 104/200 (52%), Gaps = 17/200 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFI--MKHGKSEKDIHNLRQEIEILRKLKHQNIIEML 69
+GEG FG VYKG T TVA+K + M +E+ QEI+++ K +H+N++E+L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 70 DSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQS------IAKQLVRALHYLHSNR 122
+ C+V + G L + L CL S IA+ +++LH N
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQPYN 180
IHRD+K NIL+ K+ DFG ARA A TV+ I GT YMAPE +R +
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE-IT 212
Query: 181 HTADLWSLGVILYELFVGQP 200
+D++S GV+L E+ G P
Sbjct: 213 PKSDIYSFGVVLLEIITGLP 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENI 87
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 146
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 267 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 18/256 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL +H+NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENI 85
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 144
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ S +K+CDFG AR + T L T Y APE ++
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRH---IVKDPVKYPDEMSPNFKS-- 231
+ Y + D+WS+G IL E+ +P F + H I+ P + N K+
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARN 264
Query: 232 FLKGL--LNKVPQNRL 245
+L L NKVP NRL
Sbjct: 265 YLLSLPHKNKVPWNRL 280
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 91
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 150
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 270
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 271 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 326
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 142
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 262
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 263 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 109/208 (52%), Gaps = 22/208 (10%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIH-NLRQEIEILRKLKHQ- 63
Y V++++G+G FG+V K Q VA+K + ++EK H +EI IL L+ Q
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMV----RNEKRFHRQAAEEIRILEHLRKQD 154
Query: 64 -----NIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK----CLPEEQVQSIAKQLVRA 114
N+I ML++F C+ E L+E+++ +K LP V+ A +++
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP--LVRKFAHSILQC 212
Query: 115 LHYLHSNRIIHRDMKPQNILIG--AGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPE 172
L LH NRIIH D+KP+NIL+ S +K+ DFG + + V I+ + Y APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYXXIQ-SRFYRAPE 269
Query: 173 LVREQPYNHTADLWSLGVILYELFVGQP 200
++ Y D+WSLG IL EL G P
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 138/273 (50%), Gaps = 24/273 (8%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEK-DIHNLRQEIEILRKLKH 62
+++ +++++G G+F +V + K TGQ AMK + K ++ ++ R+E ++L
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 63 QNIIEMLDSFESPQEFCVVTEF-AQGELFEILED-DKCLPEEQVQSIAKQLVRALHYLHS 120
+ I ++ +F+ +V E+ G+L +L + +P E + ++V A+ +H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI--KGTPLYMAPELVR--- 175
+HRD+KP NIL+ ++L DFG + A+ V RS+ GTP Y++PE+++
Sbjct: 181 LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVG 239
Query: 176 ----EQPYNHTADLWSLGVILYELFVGQPPFYTNS---VYALIRHIVKDPVKYP--DEMS 226
Y D W+LGV YE+F GQ PFY +S Y I H K+ + P DE
Sbjct: 240 GGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHY-KEHLSLPLVDEGV 298
Query: 227 P-NFKSFLKGLLNKVPQNRLTWSA---LLEHPF 255
P + F++ LL P+ RL HPF
Sbjct: 299 PEEARDFIQRLLCP-PETRLGRGGAGDFRTHPF 330
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 88
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 147
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 267
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 268 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 323
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 89
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 148
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 268
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 269 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 324
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 80
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 139
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 259
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 260 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 315
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 146
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 267 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 81
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 140
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 260
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 261 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 316
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 146
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 267 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 88
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 147
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 267
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 268 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 323
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 85
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 144
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 264
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 265 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 320
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 19/203 (9%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V E+VG G+FG V K K+ + VA+K I + + I LRQ L ++ H NI++
Sbjct: 13 VEEVVGRGAFGVVCKA--KWRAKDVAIKQIESESERKAFIVELRQ----LSRVNHPNIVK 66
Query: 68 MLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLP---EEQVQSIAKQLVRALHYLHSNR- 122
+ + +P C+V E+A+G L+ +L + LP S Q + + YLHS +
Sbjct: 67 LYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 123 --IIHRDMKPQNIL-IGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
+IHRD+KP N+L + G+V+K+CDFG A + + + + KG+ +MAPE+ Y
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFEGSNY 181
Query: 180 NHTADLWSLGVILYELFVGQPPF 202
+ D++S G+IL+E+ + PF
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPF 204
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 103
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 162
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 282
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 283 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 338
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 142
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 262
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 263 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 103
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +VT +L+++L+ + L + + Q++R L Y+HS
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 162
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 163 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 282
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 283 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 338
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 81
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 140
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARN 260
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 261 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 316
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 146
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 267 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 142
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 262
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 263 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 139/262 (53%), Gaps = 18/262 (6%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI-LRKLKHQNII 66
++EL G G++G V K R +GQ +A+K I S++ L +++I +R + +
Sbjct: 12 IMEL-GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ-KRLLMDLDISMRTVDCPFTV 69
Query: 67 EMLDSFESPQEFCVVTEFAQGEL----FEILEDDKCLPEEQVQSIAKQLVRALHYLHSN- 121
+ + + E L ++++ + +PE+ + IA +V+AL +LHS
Sbjct: 70 TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIK-GTPLYMAPELV----RE 176
+IHRD+KP N+LI A VK+CDFG + + + V + I G YMAPE + +
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD--VAKDIDAGCKPYMAPERINPELNQ 187
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYT-NSVYALIRHIVKDPV-KYP-DEMSPNFKSFL 233
+ Y+ +D+WSLG+ + EL + + P+ + + + ++ +V++P + P D+ S F F
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 247
Query: 234 KGLLNKVPQNRLTWSALLEHPF 255
L K + R T+ L++HPF
Sbjct: 248 SQCLKKNSKERPTYPELMQHPF 269
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 19/203 (9%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
V E+VG G+FG V K K+ + VA+K I + + I LRQ L ++ H NI++
Sbjct: 12 VEEVVGRGAFGVVCKA--KWRAKDVAIKQIESESERKAFIVELRQ----LSRVNHPNIVK 65
Query: 68 MLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLP---EEQVQSIAKQLVRALHYLHSNR- 122
+ + +P C+V E+A+G L+ +L + LP S Q + + YLHS +
Sbjct: 66 LYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 123 --IIHRDMKPQNIL-IGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPY 179
+IHRD+KP N+L + G+V+K+CDFG A + + + + KG+ +MAPE+ Y
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFEGSNY 180
Query: 180 NHTADLWSLGVILYELFVGQPPF 202
+ D++S G+IL+E+ + PF
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPF 203
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 142
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARN 262
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 263 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA++ I LR EI+IL + +H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 146
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 267 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 32/217 (14%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLR------QEIEILRKLKHQ 63
+++G+G+ V++GR K TG A+K +I LR +E E+L+KL H+
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVF-------NNISFLRPVDVQMREFEVLKKLNHK 67
Query: 64 NIIEM--LDSFESPQEFCVVTEFAQ-GELFEILEDDK---CLPEEQVQSIAKQLVRALHY 117
NI+++ ++ + + ++ EF G L+ +LE+ LPE + + + +V +++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 118 LHSNRIIHRDMKPQNIL--IG--AGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL 173
L N I+HR++KP NI+ IG SV KL DFG AR + + + S+ GT Y+ P++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV-SLYGTEEYLHPDM 186
Query: 174 VR--------EQPYNHTADLWSLGVILYELFVGQPPF 202
++ Y T DLWS+GV Y G PF
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 61/313 (19%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKH 62
+++ I +G G+ G V K + + +G +A K I H + + I N + +E+++L +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLI--HLEIKPAIRNQIIRELQVLHECNS 73
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS- 120
I+ +F S E + E G L ++L++ K +PEE + ++ ++R L YL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPLYMAPELVREQ 177
++I+HRD+KP NIL+ + +KLCDFG + + AN+ V GT YMAPE ++
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMAPERLQGT 188
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTN-------------------------------- 205
Y+ +D+WS+G+ L EL VG+ P
Sbjct: 189 HYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPG 248
Query: 206 --------------SVYALIRHIVKD-PVKYPDEM-SPNFKSFLKGLLNKVPQNRLTWSA 249
+++ L+ +IV + P K P+ + +P+F+ F+ L K P R
Sbjct: 249 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKM 308
Query: 250 LLEHPFVKETSDE 262
L H F+K + E
Sbjct: 309 LTNHTFIKRSEVE 321
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 103/200 (51%), Gaps = 17/200 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFI--MKHGKSEKDIHNLRQEIEILRKLKHQNIIEML 69
+GEG FG VYKG T TVA+K + M +E+ QEI+++ K +H+N++E+L
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 70 DSFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQS------IAKQLVRALHYLHSNR 122
+ C+V + G L + L CL S IA+ +++LH N
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLHENH 147
Query: 123 IIHRDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQPYN 180
IHRD+K NIL+ K+ DFG ARA A V+ I GT YMAPE +R +
Sbjct: 148 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE-IT 206
Query: 181 HTADLWSLGVILYELFVGQP 200
+D++S GV+L E+ G P
Sbjct: 207 PKSDIYSFGVVLLEIITGLP 226
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 11/250 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ V ++G G FG+VY R+ TG+ AMK + K K L I+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 65 ----IIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
I+ M +F +P + + + G +L L E ++ A +++ L ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ-P 178
+ +++RD+KP NIL+ V++ D G A S + GT YMAPE++++
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPEVLQKGVA 367
Query: 179 YNHTADLWSLGVILYELFVGQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
Y+ +AD +SLG +L++L G PF T + + R + V+ PD SP +S L+G
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 427
Query: 236 LLNKVPQNRL 245
LL + RL
Sbjct: 428 LLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 11/250 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ V ++G G FG+VY R+ TG+ AMK + K K L I+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 65 ----IIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
I+ M +F +P + + + G +L L E ++ A +++ L ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ-P 178
+ +++RD+KP NIL+ V++ D G A S + GT YMAPE++++
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPEVLQKGVA 367
Query: 179 YNHTADLWSLGVILYELFVGQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
Y+ +AD +SLG +L++L G PF T + + R + V+ PD SP +S L+G
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 427
Query: 236 LLNKVPQNRL 245
LL + RL
Sbjct: 428 LLQRDVNRRL 437
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 100 bits (248), Expect = 7e-21, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 20/270 (7%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSE-KDIHNLRQEIEILRKLK 61
Y + L+G+G FG V+ G R VA+K I ++ G S D E+ +L K+
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 62 ----HQNIIEMLDSFESPQEFCVVTE--FAQGELFEILEDDKCLPEEQVQSIAKQLVRAL 115
H +I +LD FE+ + F +V E +LF+ + + L E + Q+V A+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 116 HYLHSNRIIHRDMKPQNILIG-AGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV 174
+ HS ++HRD+K +NILI KL DFG + GT +Y PE +
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYT--DFDGTRVYSPPEWI 210
Query: 175 -REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFL 233
R Q + A +WSLG++LY++ G PF + + I++ + +P +SP+ + +
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEILEAELHFPAHVSPDCCALI 264
Query: 234 KGLLNKVPQNRLTWSALLEHPFVKETSDEL 263
+ L P +R + +L P+++ ++++
Sbjct: 265 RRCLAPKPSSRPSLEEILLDPWMQTPAEDV 294
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 11/250 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ V ++G G FG+VY R+ TG+ AMK + K K L I+ L
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 65 ----IIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
I+ M +F +P + + + G +L L E ++ A +++ L ++H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ-P 178
+ +++RD+KP NIL+ V++ D G A S + GT YMAPE++++
Sbjct: 309 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPEVLQKGVA 366
Query: 179 YNHTADLWSLGVILYELFVGQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
Y+ +AD +SLG +L++L G PF T + + R + V+ PD SP +S L+G
Sbjct: 367 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 426
Query: 236 LLNKVPQNRL 245
LL + RL
Sbjct: 427 LLQRDVNRRL 436
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 34/273 (12%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDD-------KCLPE---------EQVQSI 107
+ +L + P V+TEF + G L L K PE E +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-- 165
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R KG
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR--KGDAR 202
Query: 166 -PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY- 221
PL +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 222 -PDEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
PD +P + + P R T+S L+EH
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 11/250 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ V ++G G FG+VY R+ TG+ AMK + K K L I+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 65 ----IIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYLH 119
I+ M +F +P + + + G +L L E ++ A +++ L ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQ-P 178
+ +++RD+KP NIL+ V++ D G A S + GT YMAPE++++
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPEVLQKGVA 367
Query: 179 YNHTADLWSLGVILYELFVGQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKG 235
Y+ +AD +SLG +L++L G PF T + + R + V+ PD SP +S L+G
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 427
Query: 236 LLNKVPQNRL 245
LL + RL
Sbjct: 428 LLQRDVNRRL 437
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL +H+NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENI 85
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 144
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+CDFG AR + T L T Y APE ++
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 264
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++ + D
Sbjct: 265 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYD 320
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+NY + L+G GS+G VY K T + VA+K + + + D + +EI IL +LK
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 64 NIIEMLD-----SFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYL 118
II + D E +V E A +L ++ + L EE +++I L+ +++
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 119 HSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSA--NTVVLRSIKG------------ 164
H + IIHRD+KP N L+ VK+CDFG AR +++ +T ++ ++
Sbjct: 146 HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK 205
Query: 165 --------TPLYMAPELV-REQPYNHTADLWSLGVILYEL 195
T Y APEL+ ++ Y + D+WS G I EL
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 134/271 (49%), Gaps = 30/271 (11%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDD-------KCLPE---------EQVQSI 107
+ +L + P V+TEF + G L L K PE E +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-P 166
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R P
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--P 222
L +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + P
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
Query: 223 DEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
D +P + + P R T+S L+EH
Sbjct: 265 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 99.4 bits (246), Expect = 1e-20, Method: Composition-based stats.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 16/261 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G GSF VYKG T VA + ++ + ++E E L+ L+H NI+ DS
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 72 FESPQE----FCVVTEF-AQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNR--II 124
+ES + +VTE G L L+ K + ++S +Q+++ L +LH+ II
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 125 HRDMKPQNILI-GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
HRD+K NI I G VK+ D G A A+ +++ GTP + APE E+ Y+ +
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFXAPEXYEEK-YDESV 210
Query: 184 DLWSLGVILYELFVGQPPFY----TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
D+++ G E + P+ +Y + VK P + P K ++G + +
Sbjct: 211 DVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVK-PASFDKVAIPEVKEIIEGCIRQ 269
Query: 240 VPQNRLTWSALLEHPFVKETS 260
R + LL H F +E +
Sbjct: 270 NKDERYSIKDLLNHAFFQEET 290
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 34/273 (12%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDD-------KCLPE---------EQVQSI 107
+ +L + P V+TEF + G L L K PE E +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-- 165
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R KG
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR--KGDAR 202
Query: 166 -PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY- 221
PL +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 222 -PDEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
PD +P + + P R T+S L+EH
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 20/211 (9%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM- 68
+++G+G+ V++GR K TG A+K + + + + +E E+L+KL H+NI+++
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 69 -LDSFESPQEFCVVTEFAQ-GELFEILEDDK---CLPEEQVQSIAKQLVRALHYLHSNRI 123
++ + + ++ EF G L+ +LE+ LPE + + + +V +++L N I
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 124 IHRDMKPQNIL--IG--AGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVR---- 175
+HR++KP NI+ IG SV KL DFG AR + + + + GT Y+ P++
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV-XLYGTEEYLHPDMYERAVL 192
Query: 176 ----EQPYNHTADLWSLGVILYELFVGQPPF 202
++ Y T DLWS+GV Y G PF
Sbjct: 193 RKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+NY + L+G GS+G VY K + VA+K + + + D + +EI IL +LK
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 64 NIIEMLD-----SFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYL 118
II + D E +V E A +L ++ + L E+ V++I L+ ++
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 119 HSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVV-------------------- 158
H + IIHRD+KP N L+ VK+CDFG AR ++++ +
Sbjct: 148 HESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNK 207
Query: 159 -----LRSIKGTPLYMAPELV-REQPYNHTADLWSLGVILYELF 196
L S T Y APEL+ ++ Y ++ D+WS G I EL
Sbjct: 208 NLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 18/202 (8%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEML 69
E++G+G FG+ K + TG+ + MK +++ E+ +E++++R L+H N+++ +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 70 DSFESPQEFCVVTEFAQGELFE--ILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ +TE+ +G I D P Q S AK + + YLHS IIHRD
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133
Query: 128 MKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIK-----------GTPLYMAPEL 173
+ N L+ V + DFG AR M LRS+K G P +MAPE+
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 174 VREQPYNHTADLWSLGVILYEL 195
+ + Y+ D++S G++L E+
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEI 215
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 30/271 (11%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDD-------KCLPE---------EQVQSI 107
+ +L + P V+ EF + G L L K PE E +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-P 166
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R P
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--P 222
L +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + P
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Query: 223 DEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
D +P + + P R T+S L+EH
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 135/273 (49%), Gaps = 34/273 (12%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDD-------KCLPE---------EQVQSI 107
+ +L + P V+ EF + G L L K PE E +
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-- 165
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R KG
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR--KGDAR 202
Query: 166 -PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY- 221
PL +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 222 -PDEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
PD +P + + P R T+S L+EH
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 132/271 (48%), Gaps = 31/271 (11%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 94
Query: 66 IEMLDSFESPQ-------EFCVV-----------TEFAQGELFEILEDDKCLPEEQVQSI 107
+ +L + P EFC EF + E L D L E +
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD-FLTLEHLICY 153
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-P 166
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R P
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--P 222
L +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + P
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Query: 223 DEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
D +P + + P R T+S L+EH
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 123/245 (50%), Gaps = 21/245 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD- 70
+G G +G+VY G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 71 -SFESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI----AKQLVRALHYLHSNRII 124
+ E P F +VTE+ G L + L + C EE + A Q+ A+ YL I
Sbjct: 97 CTLEPP--FYIVTEYMPYGNLLDYLRE--CNREEVTAVVLLYMATQISSAMEYLEKKNFI 152
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTA 183
HRD+ +N L+G VVK+ DFG +R M+ +T + P+ + APE + ++ +
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 184 DLWSLGVILYELFV-GQPPFYT---NSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
D+W+ GV+L+E+ G P+ + VY L+ + ++ P+ P ++
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYR--MEQPEGCPPKVYELMRACWKW 270
Query: 240 VPQNR 244
P +R
Sbjct: 271 SPADR 275
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 135/273 (49%), Gaps = 34/273 (12%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDD-------KCLPE---------EQVQSI 107
+ +L + P V+ EF + G L L K PE E +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-- 165
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R KG
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR--KGDAR 211
Query: 166 -PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY- 221
PL +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 222 -PDEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
PD +P + + P R T+S L+EH
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 30/271 (11%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDD-------KCLPE---------EQVQSI 107
+ +L + P V+ EF + G L L K PE E +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-P 166
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R P
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP 213
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--P 222
L +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + P
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Query: 223 DEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
D +P + + P R T+S L+EH
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 135/273 (49%), Gaps = 34/273 (12%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 130
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDD-------KCLPE---------EQVQSI 107
+ +L + P V+ EF + G L L K PE E +
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-- 165
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R KG
Sbjct: 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR--KGDAR 248
Query: 166 -PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY- 221
PL +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ +
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 308
Query: 222 -PDEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
PD +P + + P R T+S L+EH
Sbjct: 309 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 135/273 (49%), Gaps = 36/273 (13%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 66 IEMLDSFESPQ-------EFCVV-----------TEFAQGELFEILEDDKCLPEEQVQSI 107
+ +L + P EFC EF + ++ +D L E +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKD--FLTLEHLIXY 153
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-- 165
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R KG
Sbjct: 154 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR--KGDAR 211
Query: 166 -PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY- 221
PL +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 222 -PDEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
PD +P + + P R T+S L+EH
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 30/269 (11%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDDK------------CLPEEQVQSIAKQL 111
+ +L + P V+ EF + G L L + L E + + Q+
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 112 VRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT---PL- 167
+ + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R KG PL
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR--KGDARLPLK 211
Query: 168 YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--PDE 224
+MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + PD
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 271
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+P + + P R T+S L+EH
Sbjct: 272 TTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 30/271 (11%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDD-------KCLPE---------EQVQSI 107
+ +L + P V+ EF + G L L K PE E +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-P 166
+ Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R P
Sbjct: 156 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--P 222
L +MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + P
Sbjct: 216 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 275
Query: 223 DEMSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
D +P + + P R T+S L+EH
Sbjct: 276 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 44/297 (14%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y + +GEG++G V VA+K I LR EI+IL + +H+NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 66 IEMLDSFESP-----QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
I + D +P ++ +V + + +L+++L+ + L + + Q++R L Y+HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS 142
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIKGTPLYMAPE-LVRE 176
++HRD+KP N+L+ +K+ DFG AR + T L T Y APE ++
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 177 QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------------------- 215
+ Y + D+WS+G IL E+ +P F + HI+
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARN 262
Query: 216 -------KDPVKYPDEMSPNFKSFLKGLLNKV----PQNRLTWSALLEHPFVKETSD 261
K+ V + + + PN S LL+K+ P R+ L HP++++ D
Sbjct: 263 YLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y + L+G GS+G V + K + VA+K I++ + D + +EI IL +L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 64 NIIEMLD-----SFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYL 118
+++++LD E E VV E A + ++ L E ++++ L+ + Y+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 119 HSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-----------------SANTVVL-- 159
HS I+HRD+KP N L+ VK+CDFG AR + N V
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 160 -----RSIKG---TPLYMAPELV-REQPYNHTADLWSLGVILYELF 196
R + G T Y APEL+ ++ Y D+WS+G I EL
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 143/309 (46%), Gaps = 57/309 (18%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKH 62
+++ I +G G+ G V+K K +G +A K I H + + I N + +E+++L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNS 63
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYL-HS 120
I+ +F S E + E G L ++L+ +PE+ + ++ +++ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPLYMAPELVREQ 177
++I+HRD+KP NIL+ + +KLCDFG + + AN+ V GT YM+PE ++
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMSPERLQGT 178
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTN-------------------------------- 205
Y+ +D+WS+G+ L E+ VG+ P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238
Query: 206 ----------SVYALIRHIVKD-PVKYPDEM-SPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+++ L+ +IV + P K P + S F+ F+ L K P R L+ H
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298
Query: 254 PFVKETSDE 262
F+K + E
Sbjct: 299 AFIKRSDAE 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 99/199 (49%), Gaps = 17/199 (8%)
Query: 13 GEGSFGKVYKGRRKYTGQTVAMKFI--MKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
GEG FG VYKG T TVA+K + M +E+ QEI++ K +H+N++E+L
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 71 SFESPQEFCVVTEFA-QGELFEILEDDKCLPEEQVQS------IAKQLVRALHYLHSNRI 123
+ C+V + G L + L CL S IA+ +++LH N
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRL---SCLDGTPPLSWHXRCKIAQGAANGINFLHENHH 145
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQPYNH 181
IHRD+K NIL+ K+ DFG ARA A V I GT Y APE +R +
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE-ITP 204
Query: 182 TADLWSLGVILYELFVGQP 200
+D++S GV+L E+ G P
Sbjct: 205 KSDIYSFGVVLLEIITGLP 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 143/309 (46%), Gaps = 57/309 (18%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKH 62
+++ I +G G+ G V+K K +G +A K I H + + I N + +E+++L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNS 63
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYL-HS 120
I+ +F S E + E G L ++L+ +PE+ + ++ +++ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPLYMAPELVREQ 177
++I+HRD+KP NIL+ + +KLCDFG + + AN+ V GT YM+PE ++
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMSPERLQGT 178
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTN-------------------------------- 205
Y+ +D+WS+G+ L E+ VG+ P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238
Query: 206 ----------SVYALIRHIVKD-PVKYPDEM-SPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+++ L+ +IV + P K P + S F+ F+ L K P R L+ H
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298
Query: 254 PFVKETSDE 262
F+K + E
Sbjct: 299 AFIKRSDAE 307
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 143/309 (46%), Gaps = 57/309 (18%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKH 62
+++ I +G G+ G V+K K +G +A K I H + + I N + +E+++L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNS 63
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYL-HS 120
I+ +F S E + E G L ++L+ +PE+ + ++ +++ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPLYMAPELVREQ 177
++I+HRD+KP NIL+ + +KLCDFG + + AN+ V GT YM+PE ++
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMSPERLQGT 178
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTN-------------------------------- 205
Y+ +D+WS+G+ L E+ VG+ P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238
Query: 206 ----------SVYALIRHIVKD-PVKYPDEM-SPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+++ L+ +IV + P K P + S F+ F+ L K P R L+ H
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298
Query: 254 PFVKETSDE 262
F+K + E
Sbjct: 299 AFIKRSDAE 307
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G FG+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI----AKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + A Q+ A+ YL IHR
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 194 WAFGVLLWEIATYGMSPY 211
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 143/309 (46%), Gaps = 57/309 (18%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKH 62
+++ I +G G+ G V+K K +G +A K I H + + I N + +E+++L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNS 63
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYL-HS 120
I+ +F S E + E G L ++L+ +PE+ + ++ +++ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPLYMAPELVREQ 177
++I+HRD+KP NIL+ + +KLCDFG + + AN+ V GT YM+PE ++
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMSPERLQGT 178
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTN-------------------------------- 205
Y+ +D+WS+G+ L E+ VG+ P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238
Query: 206 ----------SVYALIRHIVKD-PVKYPDEM-SPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+++ L+ +IV + P K P + S F+ F+ L K P R L+ H
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298
Query: 254 PFVKETSDE 262
F+K + E
Sbjct: 299 AFIKRSDAE 307
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 38/233 (16%)
Query: 4 ENYHVIELVGEGSFGKVYK---GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
E Y ++ +GEG+FG+V + RR G VA+K I EK R EI +L K+
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRR--GGARVALKII---KNVEKYKEAARLEINVLEKI 87
Query: 61 KHQN------IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPE--EQVQSIAKQLV 112
++ ++M D F+ C+ E F+ L+D+ LP QV+ +A QL
Sbjct: 88 NEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLC 147
Query: 113 RALHYLHSNRIIHRDMKPQNILI-------------------GAGSVVKLCDFGFARAMS 153
+A+ +LH N++ H D+KP+NIL + V++ DFG A +
Sbjct: 148 QAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA---T 204
Query: 154 ANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
+ +I T Y APE++ E ++ D+WS+G I++E +VG F T+
Sbjct: 205 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHD 257
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 138/289 (47%), Gaps = 38/289 (13%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLK-HQNIIEM 68
+++GEG+ +V T Q A+K I K + + +E+E+L + + H+N++E+
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRS--RVFREVEMLYQCQGHRNVLEL 76
Query: 69 LDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
++ FE F +V E G + + + E + + + + AL +LH+ I HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 128 MKPQNILI---GAGSVVKLCDFGFARAMSAN-------TVVLRSIKGTPLYMAPELVR-- 175
+KP+NIL S VK+CDFG + N T L + G+ YMAPE+V
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 176 -EQP--YNHTADLWSLGVILYELFVGQPPFYTN---------------SVYALIRHIVKD 217
E+ Y+ DLWSLGVILY L G PPF L I +
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 218 PVKYPDE----MSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
++PD+ +S K + LL + + RL+ + +L+HP+V+ + E
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPE 305
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 146/309 (47%), Gaps = 57/309 (18%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKH 62
+++ I +G G+ G V+K K +G +A K I H + + I N + +E+++L +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNS 90
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYL-HS 120
I+ +F S E + E G L ++L+ +PE+ + ++ +++ L YL
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPLYMAPELVREQ 177
++I+HRD+KP NIL+ + +KLCDFG + + AN+ V GT YM+PE ++
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMSPERLQGT 205
Query: 178 PYNHTADLWSLGVILYELFVGQ---PP--------------------------------- 201
Y+ +D+WS+G+ L E+ VG+ PP
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265
Query: 202 -FYTNS-----VYALIRHIVKD-PVKYPDEM-SPNFKSFLKGLLNKVPQNRLTWSALLEH 253
F +S ++ L+ +IV + P K P + S F+ F+ L K P R L+ H
Sbjct: 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325
Query: 254 PFVKETSDE 262
F+K + E
Sbjct: 326 AFIKRSDAE 334
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 143/309 (46%), Gaps = 57/309 (18%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKH 62
+++ I +G G+ G V+K K +G +A K I H + + I N + +E+++L +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECNS 125
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQG-ELFEILEDDKCLPEEQVQSIAKQLVRALHYL-HS 120
I+ +F S E + E G L ++L+ +PE+ + ++ +++ L YL
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 185
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPLYMAPELVREQ 177
++I+HRD+KP NIL+ + +KLCDFG + + AN+ V GT YM+PE ++
Sbjct: 186 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMSPERLQGT 240
Query: 178 PYNHTADLWSLGVILYELFVGQPPFYTN-------------------------------- 205
Y+ +D+WS+G+ L E+ VG+ P
Sbjct: 241 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 300
Query: 206 ----------SVYALIRHIVKD-PVKYPDEM-SPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+++ L+ +IV + P K P + S F+ F+ L K P R L+ H
Sbjct: 301 SYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVH 360
Query: 254 PFVKETSDE 262
F+K + E
Sbjct: 361 AFIKRSDAE 369
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 139
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 200 WAFGVLLWEIATYGMSPY 217
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI----AKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + A Q+ A+ YL IHR
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 198 WAFGVLLWEIATYGMSPY 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI----AKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + A Q+ A+ YL IHR
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 198 WAFGVLLWEIATYGMSPY 215
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 194 WAFGVLLWEIATYGMSPY 211
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 148
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 209 WAFGVLLWEIATYGMSPY 226
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 10 ELVGEGSFGKVYKGRRKYTG--QTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NII 66
+++GEG+FG+V K R K G A+K MK S+ D + E+E+L KL H NII
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIK-RMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 67 EMLDSFESPQEFCVVTEFA-QGELFE------ILEDD----------KCLPEEQVQSIAK 109
+L + E + E+A G L + +LE D L +Q+ A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-Y 168
+ R + YL + IHRD+ +NIL+G V K+ DFG +R V +++ P+ +
Sbjct: 140 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE--VYVKKTMGRLPVRW 197
Query: 169 MAPELVREQPYNHTADLWSLGVILYELF-VGQPPF 202
MA E + Y +D+WS GV+L+E+ +G P+
Sbjct: 198 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 232
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 22/272 (8%)
Query: 4 ENYHV-------IELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEI 56
EN+ V I +G G++G V K R +GQ A+K I S++ L +++I
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQ-KRLLXDLDI 85
Query: 57 -LRKLKHQNIIEMLDSFESPQEFCVVTEFAQGEL----FEILEDDKCLPEEQVQSIAKQL 111
R + + + + + E L ++++ + +PE+ + IA +
Sbjct: 86 SXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 145
Query: 112 VRALHYLHSN-RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
V+AL +LHS +IHRD+KP N+LI A VK CDFG + + + V G Y A
Sbjct: 146 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL-VDDVAKDIDAGCKPYXA 204
Query: 171 PELV----REQPYNHTADLWSLGVILYELFVGQPPFYT-NSVYALIRHIVKDPV-KYP-D 223
PE + ++ Y+ +D+WSLG+ EL + + P+ + + + ++ +V++P + P D
Sbjct: 205 PERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD 264
Query: 224 EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPF 255
+ S F F L K + R T+ L +HPF
Sbjct: 265 KFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 10 ELVGEGSFGKVYKGRRKYTG--QTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NII 66
+++GEG+FG+V K R K G A+K MK S+ D + E+E+L KL H NII
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIK-RMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 67 EMLDSFESPQEFCVVTEFA-QGELFE------ILEDD----------KCLPEEQVQSIAK 109
+L + E + E+A G L + +LE D L +Q+ A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-Y 168
+ R + YL + IHRD+ +NIL+G V K+ DFG +R V +++ P+ +
Sbjct: 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE--VYVKKTMGRLPVRW 207
Query: 169 MAPELVREQPYNHTADLWSLGVILYELF-VGQPPF 202
MA E + Y +D+WS GV+L+E+ +G P+
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 242
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 197 WAFGVLLWEIATYGMSPY 214
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 33/275 (12%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
+G V ++ EG F VY+ + +G+ A+K ++ + E+ + QE+ ++KL
Sbjct: 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKL 82
Query: 61 K-HQNIIEML--------DSFESPQEFCVVTEFAQGELFEIL---EDDKCLPEEQVQSIA 108
H NI++ +S EF ++TE +G+L E L E L + V I
Sbjct: 83 SGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIF 142
Query: 109 KQLVRALHYLHSNR--IIHRDMKPQNILIGAGSVVKLCDFGFARAMS----------ANT 156
Q RA+ ++H + IIHRD+K +N+L+ +KLCDFG A +S
Sbjct: 143 YQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRA 202
Query: 157 VVLRSI--KGTPLYMAPELV---REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALI 211
+V I TP+Y PE++ P D+W+LG ILY L Q PF + ++
Sbjct: 203 LVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV 262
Query: 212 RHIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLT 246
P D F S ++ +L P+ RL+
Sbjct: 263 NGKYSIPPH--DTQYTVFHSLIRAMLQVNPEERLS 295
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI----AKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + A Q+ A+ YL IHR
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
++ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 403 WAFGVLLWEIATYGMSPY 420
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++TEF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 198 WAFGVLLWEIATYGMSPY 215
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 133/269 (49%), Gaps = 30/269 (11%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NI 65
+G G+FG+V + + T +TVA+K ++K G + + L E++IL + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 66 IEMLDSFESPQ-EFCVVTEFAQ-GELFEILEDDK------------CLPEEQVQSIAKQL 111
+ +L + P V+ EF + G L L + L E + + Q+
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 112 VRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT---PL- 167
+ + +L S + IHRD+ +NIL+ +VVK+ DFG AR + + +R KG PL
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR--KGDARLPLK 211
Query: 168 YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--PDE 224
+MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + PD
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDY 271
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+P + + P R T+S L+EH
Sbjct: 272 TTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 113/213 (53%), Gaps = 14/213 (6%)
Query: 53 EIEILRKLK--HQNIIEMLDSFESPQEFCVVTEFAQ--GELFEILEDDKCLPEEQVQSIA 108
E+ +L+K+ +I +LD FE P F ++ E + +LF+ + + L EE +S
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 109 KQLVRALHYLHSNRIIHRDMKPQNILIGAG-SVVKLCDFGFARAMSANTVVLRSIKGTPL 167
Q++ A+ + H+ ++HRD+K +NILI +KL DFG + A+ +TV GT +
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT-DFDGTRV 221
Query: 168 YMAPELVREQPYN-HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMS 226
Y PE +R Y+ +A +WSLG++LY++ G PF + I++ V + +S
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVS 275
Query: 227 PNFKSFLKGLLNKVPQNRLTWSALLEHPFVKET 259
+ ++ L P +R T+ + HP++++
Sbjct: 276 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 14/199 (7%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALHYLHSNRIIH 125
F ++TEF G L + L + C +E V ++ A Q+ A+ YL IH
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRE--CNRQE-VNAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTAD 184
R++ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 398
Query: 185 LWSLGVILYELFV-GQPPF 202
+W+ GV+L+E+ G P+
Sbjct: 399 VWAFGVLLWEIATYGMSPY 417
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 92.8 bits (229), Expect = 1e-18, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +GEG FGKV Y TG+ VA+K +K G + ++EIEILR L H++
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVK-ALKEGCGPQLRSGWQREIEILRTLYHEH 71
Query: 65 IIEMLDSFESPQEFCV--VTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
I++ E E V V E+ G L + L C+ Q+ A+Q+ + YLH+
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSA--NTVVLRSIKGTPLY-MAPELVREQP 178
IHR + +N+L+ +VK+ DFG A+A+ +R +P++ APE ++E
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 190
Query: 179 YNHTADLWSLGVILYELF 196
+ + +D+WS GV LYEL
Sbjct: 191 FYYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 92.8 bits (229), Expect = 1e-18, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +GEG FGKV Y TG+ VA+K +K G + ++EIEILR L H++
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVK-ALKEGCGPQLRSGWQREIEILRTLYHEH 72
Query: 65 IIEMLDSFESPQEFCV--VTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
I++ E E V V E+ G L + L C+ Q+ A+Q+ + YLH+
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSA--NTVVLRSIKGTPLY-MAPELVREQP 178
IHR + +N+L+ +VK+ DFG A+A+ +R +P++ APE ++E
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 191
Query: 179 YNHTADLWSLGVILYELF 196
+ + +D+WS GV LYEL
Sbjct: 192 FYYASDVWSFGVTLYELL 209
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 14/199 (7%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALHYLHSNRIIH 125
F ++TEF G L + L + C +E V ++ A Q+ A+ YL IH
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRE--CNRQE-VNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTAD 184
R++ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 440
Query: 185 LWSLGVILYELFV-GQPPF 202
+W+ GV+L+E+ G P+
Sbjct: 441 VWAFGVLLWEIATYGMSPY 459
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++ EF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 137/289 (47%), Gaps = 38/289 (13%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLK-HQNIIEM 68
+++GEG+ +V T Q A+K I K + + +E+E+L + + H+N++E+
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRS--RVFREVEMLYQCQGHRNVLEL 76
Query: 69 LDSFESPQEFCVVTE-FAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
++ FE F +V E G + + + E + + + + AL +LH+ I HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 128 MKPQNILI---GAGSVVKLCDFGFARAMSAN-------TVVLRSIKGTPLYMAPELVR-- 175
+KP+NIL S VK+CDF + N T L + G+ YMAPE+V
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 176 -EQP--YNHTADLWSLGVILYELFVGQPPFYTN---------------SVYALIRHIVKD 217
E+ Y+ DLWSLGVILY L G PPF L I +
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 218 PVKYPDE----MSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
++PD+ +S K + LL + + RL+ + +L+HP+V+ + E
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPE 305
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI----AKQLVRALHYLHSNRIIHR 126
F ++ EF G L + L + C +E + A Q+ A+ YL IHR
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 194 WAFGVLLWEIATYGMSPY 211
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKY-TGQTV--AMKFIMKHGKSEKD-IHNLRQEIEI 56
+G ++ ++E +G+GSFG V +G +G+TV A+K + S+ + + + +E+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 57 LRKLKHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC-LPEEQVQSIAKQLVRA 114
+ L H+N+I + +P +VTE A G L + L + + A Q+
Sbjct: 75 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPL-YMAP 171
+ YL S R IHRD+ +N+L+ +VK+ DFG RA+ N V++ + P + AP
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY--PDEMSPN 228
E ++ + ++H +D W GV L+E+F GQ P+ + ++ I K+ + P++ +
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 253
Query: 229 FKSFLKGLLNKVPQNRLTWSAL 250
+ + P++R T+ AL
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVAL 275
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 138/273 (50%), Gaps = 13/273 (4%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKY-TGQTV--AMKFIMKHGKSEKD-IHNLRQEIEI 56
+G ++ ++E +G+GSFG V +G +G+TV A+K + S+ + + + +E+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 57 LRKLKHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC-LPEEQVQSIAKQLVRA 114
+ L H+N+I + +P +VTE A G L + L + + A Q+
Sbjct: 69 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPL-YMAP 171
+ YL S R IHRD+ +N+L+ +VK+ DFG RA+ N V++ + P + AP
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY--PDEMSPN 228
E ++ + ++H +D W GV L+E+F GQ P+ + ++ I K+ + P++ +
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 247
Query: 229 FKSFLKGLLNKVPQNRLTWSALLEHPFVKETSD 261
+ + P++R T+ AL + + +D
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 280
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++ EF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++ EF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKY-TGQTV--AMKFIMKHGKSEKD-IHNLRQEIEI 56
+G ++ ++E +G+GSFG V +G +G+TV A+K + S+ + + + +E+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 57 LRKLKHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC-LPEEQVQSIAKQLVRA 114
+ L H+N+I + +P +VTE A G L + L + + A Q+
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPL-YMAP 171
+ YL S R IHRD+ +N+L+ +VK+ DFG RA+ N V++ + P + AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY--PDEMSPN 228
E ++ + ++H +D W GV L+E+F GQ P+ + ++ I K+ + P++ +
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 229 FKSFLKGLLNKVPQNRLTWSAL 250
+ + P++R T+ AL
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVAL 265
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKY-TGQTV--AMKFIMKHGKSEKD-IHNLRQEIEI 56
+G ++ ++E +G+GSFG V +G +G+TV A+K + S+ + + + +E+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 57 LRKLKHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC-LPEEQVQSIAKQLVRA 114
+ L H+N+I + +P +VTE A G L + L + + A Q+
Sbjct: 69 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPL-YMAP 171
+ YL S R IHRD+ +N+L+ +VK+ DFG RA+ N V++ + P + AP
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY--PDEMSPN 228
E ++ + ++H +D W GV L+E+F GQ P+ + ++ I K+ + P++ +
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 247
Query: 229 FKSFLKGLLNKVPQNRLTWSAL 250
+ + P++R T+ AL
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVAL 269
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 142/311 (45%), Gaps = 51/311 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V G VA+K + + +++ +E+ +L+ + H
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L +++ + L E++ + Q++ +
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME--LDHERMSYLLYQMLCGIK 138
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR S N ++ + T Y APE++
Sbjct: 139 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVV-TRYYRAPEVILG 197
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF----------------------YTNSVYALIRHI 214
Y D+WS+G I+ EL G F + ++ +R+
Sbjct: 198 MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 257
Query: 215 VKDPVKYP----DEMSPNF------------KSFLKGLLNKV----PQNRLTWSALLEHP 254
V++ YP +E+ P++ S + LL+K+ P R++ L HP
Sbjct: 258 VENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHP 317
Query: 255 FVKETSDELNA 265
++ D A
Sbjct: 318 YITVWYDPAEA 328
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKY-TGQTV--AMKFIMKHGKSEKD-IHNLRQEIEI 56
+G ++ ++E +G+GSFG V +G +G+TV A+K + S+ + + + +E+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 57 LRKLKHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC-LPEEQVQSIAKQLVRA 114
+ L H+N+I + +P +VTE A G L + L + + A Q+
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPL-YMAP 171
+ YL S R IHRD+ +N+L+ +VK+ DFG RA+ N V++ + P + AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY--PDEMSPN 228
E ++ + ++H +D W GV L+E+F GQ P+ + ++ I K+ + P++ +
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 229 FKSFLKGLLNKVPQNRLTWSAL 250
+ + P++R T+ AL
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVAL 265
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKY-TGQTV--AMKFIMKHGKSEKD-IHNLRQEIEI 56
+G ++ ++E +G+GSFG V +G +G+TV A+K + S+ + + + +E+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 57 LRKLKHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC-LPEEQVQSIAKQLVRA 114
+ L H+N+I + +P +VTE A G L + L + + A Q+
Sbjct: 75 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPL-YMAP 171
+ YL S R IHRD+ +N+L+ +VK+ DFG RA+ N V++ + P + AP
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY--PDEMSPN 228
E ++ + ++H +D W GV L+E+F GQ P+ + ++ I K+ + P++ +
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 253
Query: 229 FKSFLKGLLNKVPQNRLTWSAL 250
+ + P++R T+ AL
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVAL 275
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G +G+VY+G K TVA+K + + ++ +E +++++KH N++++L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKCLPEEQ----VQSIAKQLVRALHYLHSNRIIHR 126
F ++ EF G L + L + C +E + +A Q+ A+ YL IHR
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G +VK+ DFG +R M+ +T + P+ + APE + ++ +D+
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 186 WSLGVILYELFV-GQPPF 202
W+ GV+L+E+ G P+
Sbjct: 197 WAFGVLLWEIATYGMSPY 214
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 10 ELVGEGSFGKVYKGRRKYTG--QTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ-NII 66
+++GEG+FG+V K R K G A+K MK S+ D + E+E+L KL H NII
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIK-RMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 67 EMLDSFESPQEFCVVTEFA-QGELFE------ILEDD----------KCLPEEQVQSIAK 109
+L + E + E+A G L + +LE D L +Q+ A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-Y 168
+ R + YL + IHR++ +NIL+G V K+ DFG +R V +++ P+ +
Sbjct: 147 DVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQE--VYVKKTMGRLPVRW 204
Query: 169 MAPELVREQPYNHTADLWSLGVILYELF-VGQPPF 202
MA E + Y +D+WS GV+L+E+ +G P+
Sbjct: 205 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 239
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 31/270 (11%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLR---------QEIEI 56
Y V + GS+G V G G VA+K + + ++ L +EI +
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 57 LRKLKHQNIIEMLD---SFESP--QEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQ 110
L H NI+ + D FE P + +VTE + +L +++ D + + + +Q
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 111 LVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
++ LH LH ++HRD+ P NIL+ + + +CDF AR +A+ + Y A
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR-WYRA 201
Query: 171 PELVRE-QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------KDPVKY 221
PELV + + + D+WS G ++ E+F + F ++ Y + IV +D V +
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMF 261
Query: 222 PDEMSPNFKSFLKGLLNKVPQNRLTWSALL 251
SP+ + +L+ L+ VP W+A++
Sbjct: 262 S---SPSARDYLRNSLSNVPAR--AWTAVV 286
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKY-TGQTV--AMKFIMKHGKSEKD-IHNLRQEIEI 56
+G ++ ++E +G+GSFG V +G +G+TV A+K + S+ + + + +E+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 57 LRKLKHQNIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC-LPEEQVQSIAKQLVRA 114
+ L H+N+I + +P +VTE A G L + L + + A Q+
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPL-YMAP 171
+ YL S R IHRD+ +N+L+ +VK+ DFG RA+ N V++ + P + AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY--PDEMSPN 228
E ++ + ++H +D W GV L+E+F GQ P+ + ++ I K+ + P++ +
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 229 FKSFLKGLLNKVPQNRLTWSAL 250
+ + P++R T+ AL
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVAL 265
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 114/226 (50%), Gaps = 12/226 (5%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQT----VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
+++G G FG+VYKG K + VA+K +K G +EK + E I+ + H NI
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIK-TLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 66 IEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLHSNRI 123
I + + ++TE+ + G L + L E D Q+ + + + + YL +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVREQPYN 180
+HRD+ +NIL+ + V K+ DFG +R + + + G + + APE + + +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT 228
Query: 181 HTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKYPDEM 225
+D+WS G++++E+ G+ P++ S + +++ I D + P M
Sbjct: 229 SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-NDGFRLPTPM 273
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 31/270 (11%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLR---------QEIEI 56
Y V + GS+G V G G VA+K + + ++ L +EI +
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 57 LRKLKHQNIIEMLD---SFESP--QEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQ 110
L H NI+ + D FE P + +VTE + +L +++ D + + + +Q
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 111 LVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMA 170
++ LH LH ++HRD+ P NIL+ + + +CDF AR +A+ + Y A
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR-WYRA 201
Query: 171 PELVRE-QPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIV--------KDPVKY 221
PELV + + + D+WS G ++ E+F + F ++ Y + IV +D V +
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMF 261
Query: 222 PDEMSPNFKSFLKGLLNKVPQNRLTWSALL 251
SP+ + +L+ L+ VP W+A++
Sbjct: 262 S---SPSARDYLRNSLSNVPAR--AWTAVV 286
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
E+ +I+ +G G FG+V+ G + G T VA+K +K G + + +E +I++KLKH
Sbjct: 9 ESLQLIKRLGNGQFGEVWMG--TWNGNTKVAIK-TLKPGTMSPE--SFLEEAQIMKKLKH 63
Query: 63 QNIIEMLDSFESPQEFCVVTEFA-QGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLH 119
++++ + S + +VTE+ +G L + L+D + L + +A Q+ + Y+
Sbjct: 64 DKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQP 178
IHRD++ NIL+G G + K+ DFG AR + N R P+ + APE
Sbjct: 123 RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 182
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
+ +D+WS G++L EL G+ P+
Sbjct: 183 FTIKSDVWSFGILLTELVTKGRVPY 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 32/229 (13%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ I+ +G G FG V++ + K A+K I + E + +E++ L KL+H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKLEHPG 64
Query: 65 IIEMLDSF-----------ESPQEFCVVT-EFAQGELFEILEDDKCLPEEQVQS----IA 108
I+ +++ SP+ + + + + E + + +C EE+ +S I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 109 KQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIK-- 163
Q+ A+ +LHS ++HRD+KP NI VVK+ DFG AM + VL +
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 164 -------GTPLYMAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTN 205
GT LYM+PE + Y+H D++SLG+IL+EL PF T
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ 230
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 82/317 (25%), Positives = 141/317 (44%), Gaps = 51/317 (16%)
Query: 3 VENYHVIELVGEGSFGKV--------YKGRRKYTGQTVAMKFIMKHGKSEK-----DIHN 49
+ +Y +I + +G F K+ + +KY + K ++K +
Sbjct: 30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 50 LRQEIEILRKLKHQNIIEMLDSFESPQEFCVVTEFAQG-------ELFEILEDD-KC-LP 100
+ E++I+ +K++ + + E ++ E+ + E F +L+ + C +P
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 101 EEQVQSIAKQLVRALHYLHSNR-IIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVL 159
+ ++ I K ++ + Y+H+ + I HRD+KP NIL+ VKL DFG + M +
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI-- 207
Query: 160 RSIKGTPLYMAPELV-REQPYNHT-ADLWSLGVILYELFVGQPPFYTN-SVYALIRHIVK 216
+ +GT +M PE E YN D+WSLG+ LY +F PF S+ L +I
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRT 267
Query: 217 DPVKYP--------------DEMSPNFKS-----FLKGLLNKVPQNRLTWSALLEHPFVK 257
++YP S NF S FLK L K P R+T L+H ++
Sbjct: 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA 327
Query: 258 ETSDELNAWELRATSVE 274
+T+ E +LR S E
Sbjct: 328 DTNIE----DLREFSKE 340
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE+ + G L L + D Q+ + + + + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG AR + + + +G + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 19/229 (8%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ + V + G+G+FG V G+ K TG +VA+K +++ + + Q++ +L H
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH---H 78
Query: 63 QNIIEMLDSFESPQE-------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQL 111
NI+++ F + E VV E+ L + P ++ QL
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 112 VRALHYLH--SNRIIHRDMKPQNILIG-AGSVVKLCDFGFARAMSANTVVLRSIKGTPLY 168
+R++ LH S + HRD+KP N+L+ A +KLCDFG A+ +S + + I + Y
Sbjct: 139 IRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYI-CSRYY 197
Query: 169 MAPELV-REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK 216
APEL+ Q Y D+WS+G I E+ +G+P F ++ + IV+
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 92
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE+ + G L L + D Q+ + + + + YL
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 152
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 153 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 213 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 16 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 69
Query: 71 SFESPQEFCVVTEF-AQGELFEIL--EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L E K L Q+ +A Q+ + Y+ +HRD
Sbjct: 70 AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 190 SFGILLTELTTKGRVPY 206
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE+ + G L L + D Q+ + + + + YL
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 12/219 (5%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
E++G G FG+V +GR K G+ VA+K +K G +E+ E I+ + +H NII
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIK-TLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEILE-DDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ + ++TEF + G L L +D Q+ + + + + YL +
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYV 138
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANT---VVLRSIKGT-PL-YMAPELVREQPY 179
HRD+ +NIL+ + V K+ DFG +R + N+ S+ G P+ + APE + + +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKF 198
Query: 180 NHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKD 217
+D WS G++++E+ G+ P++ S +I I +D
Sbjct: 199 TSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQD 237
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 90.9 bits (224), Expect = 4e-18, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 19 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 72
Query: 71 SFESPQEFCVVTEF-AQGELFEIL--EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L E K L Q+ +A Q+ + Y+ +HRD
Sbjct: 73 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 193 SFGILLTELTTKGRVPY 209
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 108/202 (53%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+GVI+ E+ G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE+ + G L L + D Q+ + + + + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 165 DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 139/312 (44%), Gaps = 58/312 (18%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 178
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 237
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357
Query: 255 FVKETSDELNAW 266
++ N W
Sbjct: 358 YI-------NVW 362
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 25/213 (11%)
Query: 12 VGEGSFGKVYKGRRKYTGQT--VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEML 69
VG G++G VYK +RK A+K I G S +EI +LR+LKH N+I +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC----REIALLRELKHPNVISLQ 84
Query: 70 DSF--ESPQEFCVVTEFAQGELFEILEDDKC---------LPEEQVQSIAKQLVRALHYL 118
F + ++ ++ ++A+ +L+ I++ + LP V+S+ Q++ +HYL
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 119 HSNRIIHRDMKPQNILI-GAG---SVVKLCDFGFARAMSANTVVLRSIKG---TPLYMAP 171
H+N ++HRD+KP NIL+ G G VK+ D GFAR ++ L + T Y AP
Sbjct: 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 172 E-LVREQPYNHTADLWSLGVILYELFVGQPPFY 203
E L+ + Y D+W++G I EL +P F+
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 142/311 (45%), Gaps = 51/311 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V G VA+K + + +++ +E+ +L+ + H
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L +++ + L E++ + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR N ++ + T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV-TRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELFVGQPPF----------------------YTNSVYALIRHI 214
Y D+WS+G I+ EL G F + ++ +R+
Sbjct: 200 MGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 259
Query: 215 VKDPVKYP----DEMSPNF------------KSFLKGLLNKV----PQNRLTWSALLEHP 254
V++ KYP +E+ P++ S + LL+K+ P R++ L HP
Sbjct: 260 VENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHP 319
Query: 255 FVKETSDELNA 265
++ D A
Sbjct: 320 YITVWYDPAEA 330
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +GEG FGKV Y TG+ VA+K +K + +QEI+ILR L H++
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVK-ALKADAGPQHRSGWKQEIDILRTLYHEH 94
Query: 65 IIEMLDSFE--SPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
II+ E +V E+ G L + L + Q+ A+Q+ + YLH+
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRSIKGTPLY-MAPELVREQP 178
IHRD+ +N+L+ +VK+ DFG A+A+ +R +P++ APE ++E
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYK 213
Query: 179 YNHTADLWSLGVILYELFV 197
+ + +D+WS GV LYEL
Sbjct: 214 FYYASDVWSFGVTLYELLT 232
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 139/312 (44%), Gaps = 58/312 (18%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 255 FVKETSDELNAW 266
++ N W
Sbjct: 320 YI-------NVW 324
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 12/219 (5%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
E++G G FG+V +GR K G+ VA+K +K G +E+ E I+ + +H NII
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIK-TLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEILE-DDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ + ++TEF + G L L +D Q+ + + + + YL +
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYV 140
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANT---VVLRSIKGT-PL-YMAPELVREQPY 179
HRD+ +NIL+ + V K+ DFG +R + N+ S+ G P+ + APE + + +
Sbjct: 141 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKF 200
Query: 180 NHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKD 217
+D WS G++++E+ G+ P++ S +I I +D
Sbjct: 201 TSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQD 239
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE+ + G L L + D Q+ + + + + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE+ + G L L + D Q+ + + + + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE+ + G L L + D Q+ + + + + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.1 bits (222), Expect = 6e-18, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 15 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 68
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD
Sbjct: 69 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 189 SFGILLTELTTKGRVPY 205
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 90.1 bits (222), Expect = 6e-18, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 17 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 70
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD
Sbjct: 71 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 191 SFGILLTELTTKGRVPY 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 90.1 bits (222), Expect = 6e-18, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 26 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 79
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 200 SFGILLTELTTKGRVPY 216
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 58/322 (18%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 255 FVKETSDELNAWELRATSVEAR 276
++ N W + R
Sbjct: 320 YI-------NVWYXXXXXXDER 334
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
+ ++ +++ +G+G FG V G Y G VA+K I K++ E ++ +L
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCI----KNDATAQAFLAEASVMTQL 56
Query: 61 KHQNIIEMLDSF-ESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALH 116
+H N++++L E +VTE+ A+G L + L L + + + + A+
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 116
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVR 175
YL N +HRD+ +N+L+ +V K+ DFG + S+ + P+ + APE +R
Sbjct: 117 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALR 172
Query: 176 EQPYNHTADLWSLGVILYELF-VGQPPF 202
E+ ++ +D+WS G++L+E++ G+ P+
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
+++ +G+G FG V G Y G VA+K I K++ E ++ +L+H N+++
Sbjct: 25 LLQTIGKGEFGDVMLG--DYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQ 78
Query: 68 MLDSF-ESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRI 123
+L E +VTE+ A+G L + L L + + + + A+ YL N
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 138
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHT 182
+HRD+ +N+L+ +V K+ DFG + S+ + P+ + APE +RE+ ++
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFSTK 194
Query: 183 ADLWSLGVILYELF-VGQPPF 202
+D+WS G++L+E++ G+ P+
Sbjct: 195 SDVWSFGILLWEIYSFGRVPY 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +GEG FGKV Y TG+ VA+K +K + +QEI+ILR L H++
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVK-ALKADCGPQHRSGWKQEIDILRTLYHEH 77
Query: 65 IIEMLDSFESPQE--FCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
II+ E E +V E+ G L + L + Q+ A+Q+ + YLHS
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHSQ 136
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRSIKGTPLY-MAPELVREQP 178
IHR++ +N+L+ +VK+ DFG A+A+ +R +P++ APE ++E
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 179 YNHTADLWSLGVILYELFV 197
+ + +D+WS GV LYEL
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE+ + G L L + D Q+ + + + + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 108/202 (53%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+GVI+ E+ G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE+ + G L L + D Q+ + + + + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG R + + + +G + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 255 FV 256
++
Sbjct: 320 YI 321
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 143/321 (44%), Gaps = 53/321 (16%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
Y +++G GSFG V++ + + + VA+K +++ +K N +E++I+R +KH N+
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQ----DKRFKN--RELQIMRIVKHPNV 94
Query: 66 IEMLDSFESPQE------FCVVTEFAQGELFEILED----DKCLPEEQVQSIAKQLVRAL 115
+++ F S + +V E+ ++ + +P ++ QL+R+L
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 116 HYLHSNRIIHRDMKPQNILIGAGS-VVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV 174
Y+HS I HRD+KPQN+L+ S V+KL DFG A+ + A + I + Y APEL+
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXI-CSRYYRAPELI 213
Query: 175 -REQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVK-------------DPV- 219
Y D+WS G ++ EL GQP F S + I+K +P
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY 273
Query: 220 ---KYPD------------EMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELN 264
K+P P+ + LL P RLT L HPF DEL
Sbjct: 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF----DELR 329
Query: 265 AWELRATSVEARGCNATWTAE 285
E R + WT E
Sbjct: 330 TGEARMPNGRELPPLFNWTKE 350
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 102
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE+ + G L L + D Q+ + + + + YL
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 162
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 163 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 222
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 223 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 108/208 (51%), Gaps = 16/208 (7%)
Query: 1 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
+ ++ +++ +G+G FG V G Y G VA+K I K++ E ++ +L
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCI----KNDATAQAFLAEASVMTQL 62
Query: 61 KHQNIIEMLDSF-ESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALH 116
+H N++++L E +VTE+ A+G L + L L + + + + A+
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVR 175
YL N +HRD+ +N+L+ +V K+ DFG + S+ + P+ + APE +R
Sbjct: 123 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALR 178
Query: 176 EQPYNHTADLWSLGVILYELF-VGQPPF 202
E ++ +D+WS G++L+E++ G+ P+
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 139/312 (44%), Gaps = 58/312 (18%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 255 FVKETSDELNAW 266
++ N W
Sbjct: 320 YI-------NVW 324
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE + G L L + D Q+ + + + + YL
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 8 VIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
+++ +G+G FG V G Y G VA+K I K++ E ++ +L+H N+++
Sbjct: 197 LLQTIGKGEFGDVMLG--DYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQ 250
Query: 68 MLDSF-ESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRI 123
+L E +VTE+ A+G L + L L + + + + A+ YL N
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 310
Query: 124 IHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHT 182
+HRD+ +N+L+ +V K+ DFG + S+ + P+ + APE +RE+ ++
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFSTK 366
Query: 183 ADLWSLGVILYELF-VGQPPF 202
+D+WS G++L+E++ G+ P+
Sbjct: 367 SDVWSFGILLWEIYSFGRVPY 387
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 192 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 245
Query: 71 SFESPQEFCVVTEF-AQGELFEIL--EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L E K L Q+ +A Q+ + Y+ +HRD
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 366 SFGILLTELTTKGRVPY 382
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +GEG FGKV Y TG+ VA+K +K + +QEI+ILR L H++
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVK-ALKADCGPQHRSGWKQEIDILRTLYHEH 77
Query: 65 IIEMLDSFESPQE--FCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSN 121
II+ E E +V E+ G L + L + Q+ A+Q+ + YLH+
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQ 136
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRSIKGTPLY-MAPELVREQP 178
IHR++ +N+L+ +VK+ DFG A+A+ +R +P++ APE ++E
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 179 YNHTADLWSLGVILYELFV 197
+ + +D+WS GV LYEL
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIK 133
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 192
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312
Query: 255 FV 256
++
Sbjct: 313 YI 314
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 192 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 245
Query: 71 SFESPQEFCVVTEF-AQGELFEIL--EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L E K L Q+ +A Q+ + Y+ +HRD
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 366 SFGILLTELTTKGRVPY 382
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 139/312 (44%), Gaps = 58/312 (18%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 178
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 237
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357
Query: 255 FVKETSDELNAW 266
++ N W
Sbjct: 358 YI-------NVW 362
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 23 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 76
Query: 71 SFESPQEFCVVTEFA-QGELFEIL--EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ +G L + L E K L Q+ ++ Q+ + Y+ +HRD
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 197 SFGILLTELTTKGRVPY 213
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +GEG FGKV Y TG+ VA+K +K I +L++EIEILR L H+N
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVK-SLKPESGGNHIADLKKEIEILRNLYHEN 84
Query: 65 IIEM--LDSFESPQEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHS 120
I++ + + + ++ EF G L E L +K + +Q A Q+ + + YL S
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPELVREQ 177
+ +HRD+ +N+L+ + VK+ DFG +A+ + ++ + +P++ APE + +
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 178 PYNHTADLWSLGVILYELFV 197
+ +D+WS GV L+EL
Sbjct: 205 KFYIASDVWSFGVTLHELLT 224
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 26 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 79
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 200 SFGILLTELTTKGRVPY 216
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +GEG FGKV Y TG+ VA+K +K I +L++EIEILR L H+N
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVK-SLKPESGGNHIADLKKEIEILRNLYHEN 72
Query: 65 IIEM--LDSFESPQEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHS 120
I++ + + + ++ EF G L E L +K + +Q A Q+ + + YL S
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPELVREQ 177
+ +HRD+ +N+L+ + VK+ DFG +A+ + ++ + +P++ APE + +
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 178 PYNHTADLWSLGVILYELFV 197
+ +D+WS GV L+EL
Sbjct: 193 KFYIASDVWSFGVTLHELLT 212
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 141
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 200
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 260
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 261 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 320
Query: 255 FV 256
++
Sbjct: 321 YI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 255 FV 256
++
Sbjct: 320 YI 321
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 27/258 (10%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+GEG+FGKV+ + VA+K + + SE + ++E E+L L+HQ+I+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIV 106
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEILE----DDKCLPEE-----------QVQSIAKQ 110
+ +V E+ + G+L L D K L Q+ ++A Q
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 111 LVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL-Y 168
+ + YL +HRD+ +N L+G G VVK+ DFG +R + S + + P+ +
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 169 MAPELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMS 226
M PE + + + +D+WS GV+L+E+F G+ P+Y S I I + ++ P
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP 286
Query: 227 PNFKSFLKGLLNKVPQNR 244
P + ++G + PQ R
Sbjct: 287 PEVYAIMRGCWQREPQQR 304
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 275 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 328
Query: 71 SFESPQEFCVVTEF-AQGELFEIL--EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L E K L Q+ +A Q+ + Y+ +HRD
Sbjct: 329 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 449 SFGILLTELTTKGRVPY 465
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 139
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 140 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 198
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 199 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 258
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 259 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 318
Query: 255 FV 256
++
Sbjct: 319 YI 320
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 27/258 (10%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+GEG+FGKV+ + VA+K + + SE + ++E E+L L+HQ+I+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIV 83
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEILE----DDKCLPEE-----------QVQSIAKQ 110
+ +V E+ + G+L L D K L Q+ ++A Q
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 111 LVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL-Y 168
+ + YL +HRD+ +N L+G G VVK+ DFG +R + S + + P+ +
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 169 MAPELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMS 226
M PE + + + +D+WS GV+L+E+F G+ P+Y S I I + ++ P
Sbjct: 204 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP 263
Query: 227 PNFKSFLKGLLNKVPQNR 244
P + ++G + PQ R
Sbjct: 264 PEVYAIMRGCWQREPQQR 281
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 134
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 193
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 253
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 254 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 313
Query: 255 FV 256
++
Sbjct: 314 YI 315
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 133/275 (48%), Gaps = 41/275 (14%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ I ++G+G+FG+V K R + A+K I +H +E+ + + E+ +L L HQ
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RH--TEEKLSTILSEVMLLASLNHQY 63
Query: 65 IIEMLDSFESPQEFC-------------VVTEFAQ-GELFEILEDDKCLPE-EQVQSIAK 109
++ ++ + F + E+ + G L++++ + + ++ + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR--------- 160
Q++ AL Y+HS IIHRD+KP NI I VK+ DFG A+ + + +L+
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 161 -----SIKGTPLYMAPELVR-EQPYNHTADLWSLGVILYELFVGQPPFYTN----SVYAL 210
S GT +Y+A E++ YN D++SLG+I +E+ PF T ++
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240
Query: 211 IRHI-VKDPVKYPDEMSPNFKSFLKGLLNKVPQNR 244
+R + ++ P + D K ++ L++ P R
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKR 275
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 134
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 193
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 253
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 254 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 313
Query: 255 FV 256
++
Sbjct: 314 YI 315
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 141
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 200
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 260
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 261 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 320
Query: 255 FV 256
++
Sbjct: 321 YI 322
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 27/258 (10%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+GEG+FGKV+ + VA+K + + SE + ++E E+L L+HQ+I+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIV 77
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEILE----DDKCLPEE-----------QVQSIAKQ 110
+ +V E+ + G+L L D K L Q+ ++A Q
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 111 LVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL-Y 168
+ + YL +HRD+ +N L+G G VVK+ DFG +R + S + + P+ +
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 169 MAPELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMS 226
M PE + + + +D+WS GV+L+E+F G+ P+Y S I I + ++ P
Sbjct: 198 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP 257
Query: 227 PNFKSFLKGLLNKVPQNR 244
P + ++G + PQ R
Sbjct: 258 PEVYAIMRGCWQREPQQR 275
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE + G L L + D Q+ + + + + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 165 DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 255 FV 256
++
Sbjct: 320 YI 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 133
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 192
Query: 177 QPYNHTADLWSLGVILYELF---------------------VGQP-PFYTNSVYALIRHI 214
Y D+WS+G I+ E+ +G P P + + +R+
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252
Query: 215 VKDPVKY---------PDEMSP-----------NFKSFLKGLLNKVPQNRLTWSALLEHP 254
V++ KY PD + P + L +L P R++ L+HP
Sbjct: 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312
Query: 255 FV 256
++
Sbjct: 313 YI 314
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 107/202 (52%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+G I+ E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 21/201 (10%)
Query: 12 VGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
+G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H NI++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 68 MLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALHYLH 119
S + ++ EF G L E L+ K E++ I Q+ + + YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK----ERIDHIKLLQYTSQICKGMEYLG 134
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPELVRE 176
+ R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE + E
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 177 QPYNHTADLWSLGVILYELFV 197
++ +D+WS GV+LYELF
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.2 bits (217), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 23 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 76
Query: 71 SFESPQEFCVVTEFA-QGELFEIL--EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ +G L + L E K L Q+ ++ Q+ + Y+ +HRD
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 197 SFGILLTELTTKGRVPY 213
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 10/219 (4%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLK 61
N + ++VG G FG+V GR K + +VA+K +K G +EK + E I+ +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK-TLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLH 119
H NII + + +VTE + G L L + D Q+ + + + + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 120 SNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVRE 176
+HRD+ +NILI + V K+ DFG +R + + + +G + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 177 QPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+ + +D+WS G++L+E+ G+ P++ S +I+ +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 88.2 bits (217), Expect = 3e-17, Method: Composition-based stats.
Identities = 73/258 (28%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KH 62
+++ + +G GS+G+V+K R K G+ A+K M + KD E+ K+ +H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 63 QNIIEMLDSFESPQEFCVVTEFAQGELFEILED-DKCLPEEQVQSIAKQLVRALHYLHSN 121
+ + ++E + TE L + E LPE QV + + AL +LHS
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPLYMAPELVREQPYN 180
++H D+KP NI +G KL DFG + +A ++ +G P YMAPEL+ + Y
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ--EGDPRYMAPELL-QGSYG 233
Query: 181 HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNKV 240
AD++SLG+ + E+ + + +R P ++ +S +S L +L
Sbjct: 234 TAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPP-EFTAGLSSELRSVLVMMLEPD 292
Query: 241 PQNRLTWSALLEHPFVKE 258
P+ R T ALL P +++
Sbjct: 293 PKLRATAEALLALPVLRQ 310
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 134/306 (43%), Gaps = 64/306 (20%)
Query: 6 YHVIELVGEGSFGKVYKGRRKYTGQTVAMK-FIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
Y ++ +G G G V+ + VA+K ++ +S K H LR EI+I+R+L H N
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK--HALR-EIKIIRRLDHDN 69
Query: 65 IIEMLD--------------SFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQ 110
I+++ + S +V E+ + +L +LE L EE + Q
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLL-EEHARLFMYQ 128
Query: 111 LVRALHYLHSNRIIHRDMKPQNILIGAGSVV-KLCDFGFARAMSANTVVLRSIKG----- 164
L+R L Y+HS ++HRD+KP N+ I +V K+ DFG AR M + S KG
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHY----SHKGHLSEG 184
Query: 165 --TPLYMAPELVREQPYNHTA--DLWSLGVILYELFVGQPPF------------------ 202
T Y +P L+ P N+T D+W+ G I E+ G+ F
Sbjct: 185 LVTKWYRSPRLLL-SPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243
Query: 203 --------YTNSVYALIRHIVKDPVKYPDEMSPNFK----SFLKGLLNKVPQNRLTWSAL 250
+ + IR+ + +P K ++ P FL+ +L P +RLT
Sbjct: 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303
Query: 251 LEHPFV 256
L HP++
Sbjct: 304 LSHPYM 309
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ A VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 137 IAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 196
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 197 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 247
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
E Y ++ +GEG+FGKV + G++ VA+K I GK + R EI +L+K+K
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA---RLEINVLKKIKE 107
Query: 63 QN------IIEMLDSFESPQEFCVVTEFAQGELFEILEDD--KCLPEEQVQSIAKQLVRA 114
++ + M D F C+ E FE L+++ + P V+ +A QL A
Sbjct: 108 KDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 167
Query: 115 LHYLHSNRIIHRDMKPQNILI-------------------GAGSVVKLCDFGFARAMSAN 155
L +LH N++ H D+KP+NIL + +++ DFG A +
Sbjct: 168 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH 227
Query: 156 TVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
+I T Y PE++ E + D+WS+G IL+E + G F T+
Sbjct: 228 HT---TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 275
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 10/214 (4%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+++G G FG+V GR K G+ VA+K +K G ++K + E I+ + H NII
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIK-TLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ + ++TE+ + G L L ++D Q+ + + + + YL +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVREQPYNH 181
HRD+ +NIL+ + V K+ DFG +R + + + +G + + APE + + +
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 192
Query: 182 TADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+D+WS G++++E+ G+ P++ S +I+ I
Sbjct: 193 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.8 bits (216), Expect = 3e-17, Method: Composition-based stats.
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 26 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYA 80
Query: 71 SFESPQEFCVVTEFAQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ V+ ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD+
Sbjct: 81 VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+ NIL+G V K+ DFG AR + N R P+ + APE + +D+WS
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 188 LGVILYELFV-GQPPF 202
G++L EL G+ P+
Sbjct: 201 FGILLTELTTKGRVPY 216
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 107/202 (52%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+G I+ E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 10/214 (4%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+++G G FG+V GR K G+ VA+K +K G ++K + E I+ + H NII
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIK-TLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ + ++TE+ + G L L ++D Q+ + + + + YL +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVREQPYNH 181
HRD+ +NIL+ + V K+ DFG +R + + + +G + + APE + + +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 198
Query: 182 TADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+D+WS G++++E+ G+ P++ S +I+ I
Sbjct: 199 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
E Y ++ +GEG+FGKV + G++ VA+K I GK + R EI +L+K+K
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA---RLEINVLKKIKE 75
Query: 63 QN------IIEMLDSFESPQEFCVVTEFAQGELFEILEDD--KCLPEEQVQSIAKQLVRA 114
++ + M D F C+ E FE L+++ + P V+ +A QL A
Sbjct: 76 KDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135
Query: 115 LHYLHSNRIIHRDMKPQNILI-------------------GAGSVVKLCDFGFARAMSAN 155
L +LH N++ H D+KP+NIL + +++ DFG A +
Sbjct: 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH 195
Query: 156 TVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
+I T Y PE++ E + D+WS+G IL+E + G F T+
Sbjct: 196 HT---TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
E Y ++ +GEG+FGKV + G++ VA+K I GK + R EI +L+K+K
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA---RLEINVLKKIKE 84
Query: 63 QN------IIEMLDSFESPQEFCVVTEFAQGELFEILEDD--KCLPEEQVQSIAKQLVRA 114
++ + M D F C+ E FE L+++ + P V+ +A QL A
Sbjct: 85 KDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 144
Query: 115 LHYLHSNRIIHRDMKPQNILI-------------------GAGSVVKLCDFGFARAMSAN 155
L +LH N++ H D+KP+NIL + +++ DFG A +
Sbjct: 145 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH 204
Query: 156 TVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
+I T Y PE++ E + D+WS+G IL+E + G F T+
Sbjct: 205 HT---TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 252
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 107/202 (52%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+G I+ E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 44/231 (19%)
Query: 12 VGEGSFGKVYK-------GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+GEG FGKV K GR YT TVA+K ++K S ++ +L E +L+++ H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYT--TVAVK-MLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 65 IIEMLDSFESPQEFCVVTEFAQ-GELFEILE------------------------DDKCL 99
+I++ + ++ E+A+ G L L D++ L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 100 PEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFAR-AMSANTVV 158
+ S A Q+ + + YL +++HRD+ +NIL+ G +K+ DFG +R ++ V
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 159 LRSIKGTPL-YMAPELVREQPYNHTADLWSLGVILYEL-------FVGQPP 201
RS P+ +MA E + + Y +D+WS GV+L+E+ + G PP
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 6 YHVIELVGEGSFGKVYKG-RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
Y +++ +GEG+FGKV + K G+ VA+K + ++ R EI++L L +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHLNTTD 72
Query: 65 ------IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPE--EQVQSIAKQLVRALH 116
++ML+ FE C+V E ++ ++++ LP + ++ +A Q+ ++++
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 117 YLHSNRIIHRDMKPQNILIGAGSV-------------------VKLCDFGFARAMSANTV 157
+LHSN++ H D+KP+NIL +K+ DFG A +
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS 192
Query: 158 VLRSIKGTPLYMAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
L S T Y APE++ ++ D+WS+G IL E ++G F T+
Sbjct: 193 TLVS---TRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 44/231 (19%)
Query: 12 VGEGSFGKVYK-------GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+GEG FGKV K GR YT TVA+K ++K S ++ +L E +L+++ H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYT--TVAVK-MLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 65 IIEMLDSFESPQEFCVVTEFAQ-GELFEILE------------------------DDKCL 99
+I++ + ++ E+A+ G L L D++ L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 100 PEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFAR-AMSANTVV 158
+ S A Q+ + + YL +++HRD+ +NIL+ G +K+ DFG +R ++ V
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 159 LRSIKGTPL-YMAPELVREQPYNHTADLWSLGVILYEL-------FVGQPP 201
RS P+ +MA E + + Y +D+WS GV+L+E+ + G PP
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+G I+ E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ + VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVW 196
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 197 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 247
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 10/214 (4%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+++G G FG+V GR K G+ VA+K +K G ++K + E I+ + H NII
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIK-TLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ + ++TE+ + G L L ++D Q+ + + + + YL +
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVREQPYNH 181
HRD+ +NIL+ + V K+ DFG +R + + + +G + + APE + + +
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 213
Query: 182 TADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+D+WS G++++E+ G+ P++ S +I+ I
Sbjct: 214 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 141
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 200
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+G I+ E+ G
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKG 222
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 12/219 (5%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+++G G FG+V G K G+ VA+K +K G +EK + E I+ + H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIK-TLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ ++TEF + G L L ++D Q+ + + + + YL +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 157
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANT---VVLRSIKGT-PL-YMAPELVREQPY 179
HRD+ +NIL+ + V K+ DFG +R + +T ++ G P+ + APE ++ + +
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 217
Query: 180 NHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKD 217
+D+WS G++++E+ G+ P++ + +I I +D
Sbjct: 218 TSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQD 256
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 193 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGNMSPEA--FLQEAQVMKKLRHEKLVQLY- 246
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD
Sbjct: 247 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 306
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG R + N R P+ + APE + +D+W
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 367 SFGILLTELTTKGRVPY 383
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 13/200 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +G+G+FG V Y TG VA+K + G ++ + ++EI+IL+ L
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDF 85
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHS 120
I++ P Q +V E+ G L + L+ + L ++ + Q+ + + YL S
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFAR--AMSANTVVLRSIKGTPLY-MAPELVREQ 177
R +HRD+ +NIL+ + + VK+ DFG A+ + + V+R +P++ APE + +
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 178 PYNHTADLWSLGVILYELFV 197
++ +D+WS GV+LYELF
Sbjct: 206 IFSRQSDVWSFGVVLYELFT 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + ++ + T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV-TRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+G I+ E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ + VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 196
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 197 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 247
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 11/225 (4%)
Query: 11 LVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
++G G FG+V GR K G+ VA+K +K G +EK + E I+ + H NII
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIK-TLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 68 MLDSFESPQEFCVVTEFAQ-GELFEILE-DDKCLPEEQVQSIAKQLVRALHYLHSNRIIH 125
+ + +VTE+ + G L L+ +D Q+ + + + + YL +H
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVH 147
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVREQPYNHT 182
RD+ +NILI + V K+ DFG +R + + + +G + + APE + + +
Sbjct: 148 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSA 207
Query: 183 ADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDEMS 226
+D+WS G++++E+ G+ P++ + +I+ V++ + P M
Sbjct: 208 SDVWSYGIVMWEVVSYGERPYWEMTNQDVIK-AVEEGYRLPSPMD 251
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 13/200 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +G+G+FG V Y TG VA+K + G ++ + ++EI+IL+ L
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDF 72
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHS 120
I++ P Q +V E+ G L + L+ + L ++ + Q+ + + YL S
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFAR--AMSANTVVLRSIKGTPLY-MAPELVREQ 177
R +HRD+ +NIL+ + + VK+ DFG A+ + + V+R +P++ APE + +
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 178 PYNHTADLWSLGVILYELFV 197
++ +D+WS GV+LYELF
Sbjct: 193 IFSRQSDVWSFGVVLYELFT 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 13/200 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +G+G+FG V Y TG VA+K + G ++ + ++EI+IL+ L
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDF 69
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHS 120
I++ P E +V E+ G L + L+ + L ++ + Q+ + + YL S
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFAR--AMSANTVVLRSIKGTPLYM-APELVREQ 177
R +HRD+ +NIL+ + + VK+ DFG A+ + + V+R +P++ APE + +
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 178 PYNHTADLWSLGVILYELFV 197
++ +D+WS GV+LYELF
Sbjct: 190 IFSRQSDVWSFGVVLYELFT 209
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 26 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYA 80
Query: 71 SFESPQEFCVVTEFAQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ V+ ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD+
Sbjct: 81 VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+ NIL+G V K+ DFG AR + N R P+ + APE + +D+WS
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 188 LGVILYELFV-GQPPF 202
G++L EL G+ P+
Sbjct: 201 FGILLTELTTKGRVPY 216
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+G I+ E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 26 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYA 80
Query: 71 SFESPQEFCVVTEFAQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ V+ ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD+
Sbjct: 81 VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+ NIL+G V K+ DFG AR + N R P+ + APE + +D+WS
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 188 LGVILYELFV-GQPPF 202
G++L EL G+ P+
Sbjct: 201 FGILLTELTTKGRVPY 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 13/200 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
I +G+G+FG V Y TG VA+K + G ++ + ++EI+IL+ L
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDF 73
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHS 120
I++ P Q +V E+ G L + L+ + L ++ + Q+ + + YL S
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFAR--AMSANTVVLRSIKGTPLY-MAPELVREQ 177
R +HRD+ +NIL+ + + VK+ DFG A+ + + V+R +P++ APE + +
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 178 PYNHTADLWSLGVILYELFV 197
++ +D+WS GV+LYELF
Sbjct: 194 IFSRQSDVWSFGVVLYELFT 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 145
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 146 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 204
Query: 177 QPYNHTADLWSLGVILYEL 195
Y DLWS+G I+ E+
Sbjct: 205 MGYKENVDLWSVGCIMGEM 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 34/232 (14%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQT-----VAMKFIMKHGKSEKDIHNLRQEIEILR 58
EN +++G G+FGKV +T VA+K ++K + L E++++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVK-MLKEKADSSEREALMSELKMMT 103
Query: 59 KL-KHQNIIEMLD--SFESP----QEFCVVTE-----------FAQGEL-------FEIL 93
+L H+NI+ +L + P E+C + F++ E+ E
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 94 EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARA-M 152
ED L E + A Q+ + + +L +HRD+ +N+L+ G VVK+CDFG AR M
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 153 SANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPF 202
S + V+R P+ +MAPE + E Y +D+WS G++L+E+F +G P+
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 41/275 (14%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ I ++G+G+FG+V K R + A+K I +H +E+ + + E+ +L L HQ
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RH--TEEKLSTILSEVMLLASLNHQY 63
Query: 65 IIEMLDSFESPQEFCV--------VTEFAQGE------LFEILEDDKCLPE-EQVQSIAK 109
++ ++ + F T F Q E L++++ + + ++ + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR--------- 160
Q++ AL Y+HS IIHRD+KP NI I VK+ DFG A+ + + +L+
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 161 -----SIKGTPLYMAPELVR-EQPYNHTADLWSLGVILYELFVGQPPFYTN----SVYAL 210
S GT +Y+A E++ YN D++SLG+I +E+ PF T ++
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240
Query: 211 IRHI-VKDPVKYPDEMSPNFKSFLKGLLNKVPQNR 244
+R + ++ P + D K ++ L++ P R
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKR 275
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 192 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLY- 245
Query: 71 SFESPQEFCVVTEF-AQGELFEIL--EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +V E+ ++G L + L E K L Q+ +A Q+ + Y+ +HRD
Sbjct: 246 AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 366 SFGILLTELTTKGRVPY 382
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 82 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 141
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ + VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 142 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 201
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 202 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 252
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 142
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 143 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMVPFVVTRYYRAPEVILG 201
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+G I+ E+ G
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKG 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 134
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 193
Query: 177 QPYNHTADLWSLGVILYEL 195
Y DLWS+G I+ E+
Sbjct: 194 MGYKENVDLWSVGCIMGEM 212
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 9/250 (3%)
Query: 9 IELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
++ +G G FG V+ G VA+K I + SE+D +E E++ KL H ++++
Sbjct: 13 VQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 68
Query: 69 LDSFESPQEFCVVTEFAQ-GELFEILEDDKCL-PEEQVQSIAKQLVRALHYLHSNRIIHR 126
C+VTEF + G L + L + L E + + + + YL +IHR
Sbjct: 69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 128
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G V+K+ DFG R + + + P+ + +PE+ Y+ +D+
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 186 WSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY-PDEMSPNFKSFLKGLLNKVPQN 243
WS GV+++E+F G+ P+ S ++ I Y P S + + + P++
Sbjct: 189 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPED 248
Query: 244 RLTWSALLEH 253
R +S LL
Sbjct: 249 RPAFSRLLRQ 258
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 103
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
KL HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 104 KLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 284 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 313
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYELFVG 198
Y D+WS+G I+ E+ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 72
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 128
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIK--GTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + + + +P++ APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 105 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 164
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ + VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 165 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 224
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 225 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 275
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 89
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
KL HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 90 KLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 150 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 270 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 299
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 72
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 128
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 79
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 135
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 136 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 103
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 159
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 77
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 133
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 134 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ + VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 196
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 197 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 44/231 (19%)
Query: 12 VGEGSFGKVYK-------GRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
+GEG FGKV K GR YT TVA+K ++K S ++ +L E +L+++ H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYT--TVAVK-MLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 65 IIEMLDSFESPQEFCVVTEFAQ-GELFEILE------------------------DDKCL 99
+I++ + ++ E+A+ G L L D++ L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 100 PEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFAR-AMSANTVV 158
+ S A Q+ + + YL ++HRD+ +NIL+ G +K+ DFG +R ++ V
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 159 LRSIKGTPL-YMAPELVREQPYNHTADLWSLGVILYEL-------FVGQPP 201
RS P+ +MA E + + Y +D+WS GV+L+E+ + G PP
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++K++H+ +++ L
Sbjct: 26 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKIRHEKLVQ-LY 79
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
++ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 200 SFGILLTELTTKGRVPY 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 78
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 134
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 135 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 90
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 146
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 75
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 131
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 76
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 132
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 133 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 80 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 139
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ + VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 140 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 199
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 200 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 250
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 72
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 128
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 90
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 146
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 79 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 138
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ + VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 139 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 198
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 199 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 249
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMEPEVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYEL 195
Y DLWS+G I+ E+
Sbjct: 200 MGYKENVDLWSVGCIMGEM 218
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 124/249 (49%), Gaps = 10/249 (4%)
Query: 11 LVGEGSFGKVYKG-RRKYTGQTVAMKFIMKHGKSEKDIHNLRQ---EIEILRKLKHQNII 66
++GEG FG+VY+G + G+ + + +K K + + N + E I++ L H +I+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVA--VKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 67 EMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIH 125
+++ E + ++ + GEL LE +K L + + Q+ +A+ YL S +H
Sbjct: 89 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 148
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTAD 184
RD+ +NIL+ + VKL DFG +R + S+ P+ +M+PE + + + +D
Sbjct: 149 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASD 208
Query: 185 LWSLGVILYELF-VGQPPFYTNSVYALIRHIVK-DPVKYPDEMSPNFKSFLKGLLNKVPQ 242
+W V ++E+ G+ PF+ +I + K D + PD P + + + P
Sbjct: 209 VWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPS 268
Query: 243 NRLTWSALL 251
+R ++ L+
Sbjct: 269 DRPRFTELV 277
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ +++ L
Sbjct: 26 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQ-LY 79
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ S + +VTE+ ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ NIL+G V K+ DFG AR + N R P+ + APE + +D+W
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 187 SLGVILYELFV-GQPPF 202
S G++L EL G+ P+
Sbjct: 200 SFGILLTELTTKGRVPY 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 124/249 (49%), Gaps = 10/249 (4%)
Query: 11 LVGEGSFGKVYKG-RRKYTGQTVAMKFIMKHGKSEKDIHNLRQ---EIEILRKLKHQNII 66
++GEG FG+VY+G + G+ + + +K K + + N + E I++ L H +I+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVA--VKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 67 EMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIH 125
+++ E + ++ + GEL LE +K L + + Q+ +A+ YL S +H
Sbjct: 77 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 136
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTAD 184
RD+ +NIL+ + VKL DFG +R + S+ P+ +M+PE + + + +D
Sbjct: 137 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASD 196
Query: 185 LWSLGVILYELF-VGQPPFYTNSVYALIRHIVK-DPVKYPDEMSPNFKSFLKGLLNKVPQ 242
+W V ++E+ G+ PF+ +I + K D + PD P + + + P
Sbjct: 197 VWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPS 256
Query: 243 NRLTWSALL 251
+R ++ L+
Sbjct: 257 DRPRFTELV 265
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 71
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 127
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 128 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 70
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 126
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 127 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 74 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 133
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ + VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 134 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 193
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 194 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 244
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 516
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ A VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 517 IAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 576
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 577 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 627
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 80
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 81 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 140
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 141 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 200
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 260
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 261 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 290
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 134/280 (47%), Gaps = 25/280 (8%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ-----TVAMKFIMKHGKSEKDIHNLRQEIEILRK 59
N + +G G+FGKV + G+ VA+K ++K + L E++I+
Sbjct: 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK-MLKSTAHADEKEALMSELKIMSH 97
Query: 60 L-KHQNIIEMLDSFESPQEFCVVTEFA-QGELFEIL----------EDDKCLPEEQVQSI 107
L +H+NI+ +L + V+TE+ G+L L ED + L +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRSIKGT 165
+ Q+ + + +L S IHRD+ +N+L+ G V K+ DFG AR + +N +V + +
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 166 PLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--P 222
+MAPE + + Y +D+WS G++L+E+F +G P+ V + +VKD + P
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 277
Query: 223 DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
N S ++ P +R T+ + F++E + E
Sbjct: 278 AFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQAQE 315
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 124/249 (49%), Gaps = 10/249 (4%)
Query: 11 LVGEGSFGKVYKG-RRKYTGQTVAMKFIMKHGKSEKDIHNLRQ---EIEILRKLKHQNII 66
++GEG FG+VY+G + G+ + + +K K + + N + E I++ L H +I+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVA--VKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 67 EMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIH 125
+++ E + ++ + GEL LE +K L + + Q+ +A+ YL S +H
Sbjct: 73 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 132
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTAD 184
RD+ +NIL+ + VKL DFG +R + S+ P+ +M+PE + + + +D
Sbjct: 133 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASD 192
Query: 185 LWSLGVILYELF-VGQPPFYTNSVYALIRHIVK-DPVKYPDEMSPNFKSFLKGLLNKVPQ 242
+W V ++E+ G+ PF+ +I + K D + PD P + + + P
Sbjct: 193 VWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPS 252
Query: 243 NRLTWSALL 251
+R ++ L+
Sbjct: 253 DRPRFTELV 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 10/196 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G+G FG+V+ G + G T VA+K +K G + QE ++++KL+H+ ++++
Sbjct: 26 LGQGCFGEVWMG--TWNGTTRVAIK-TLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYA 80
Query: 71 SFESPQEFCVVTEFAQGELFEILEDD--KCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ V ++G L + L+ + K L Q+ +A Q+ + Y+ +HRD+
Sbjct: 81 VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+ NIL+G V K+ DFG AR + N R P+ + APE + +D+WS
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 188 LGVILYELFV-GQPPF 202
G++L EL G+ P+
Sbjct: 201 FGILLTELTTKGRVPY 216
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 88
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 89 KFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 149 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 268
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 269 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 298
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 88
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 89 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 149 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 268
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 269 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 298
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 34/229 (14%)
Query: 6 YHVIELVGEGSFGKVYKG-RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
Y +++ +GEG+FGKV + K G+ VA+K + ++ R EI++L L +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHLNTTD 72
Query: 65 ------IIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPE--EQVQSIAKQLVRALH 116
++ML+ FE C+V E ++ ++++ LP + ++ +A Q+ ++++
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 117 YLHSNRIIHRDMKPQNILIGAGSV-------------------VKLCDFGFARAMSANTV 157
+LHSN++ H D+KP+NIL +K+ DFG A +
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS 192
Query: 158 VLRSIKGTPLYMAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTNS 206
L + Y APE++ ++ D+WS+G IL E ++G F T+
Sbjct: 193 TLVXXRH---YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 9 IELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
++ +G G FG V+ G VA+K I + SE+D +E E++ KL H ++++
Sbjct: 12 VQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 67
Query: 69 LDSFESPQEFCVVTEFAQ-GELFEILEDDKCL-PEEQVQSIAKQLVRALHYLHSNRIIHR 126
C+V EF + G L + L + L E + + + + YL +IHR
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHR 127
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G V+K+ DFG R + + + P+ + +PE+ Y+ +D+
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 186 WSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY-PDEMSPNFKSFLKGLLNKVPQN 243
WS GV+++E+F G+ P+ S ++ I Y P S + + + P++
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPED 247
Query: 244 RLTWSALLEH 253
R +S LL
Sbjct: 248 RPAFSRLLRQ 257
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
++ Y ++ +G G+ G V + VA+K + + +++ +E+ +++ + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 63 QNIIEMLDSF------ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALH 116
+NII +L+ F E Q+ +V E L ++++ + L E++ + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVRE 176
+LHS IIHRD+KP NI++ + +K+ DFG AR + + ++ T Y APE++
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMEPEVVTRYYRAPEVILG 199
Query: 177 QPYNHTADLWSLGVILYEL 195
Y D+WS+G I+ E+
Sbjct: 200 MGYKENVDIWSVGCIMGEM 218
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVYSEQDELDFLMEALIIS 103
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 104 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 284 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 313
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 103
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 104 KFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 284 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 313
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 89
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 90 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 150 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 270 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 299
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 105
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 106 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 165
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 166 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 225
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 285
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 286 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 315
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E+ +++ +G G FG+V+ G Y T +K G + +E +++ L+H
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGY--YNNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHD 68
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDK----CLPEEQVQSIAKQLVRALHYL 118
++ + + ++TE+ A+G L + L+ D+ LP ++ + Q+ + Y+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYI 126
Query: 119 HSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQ 177
IHRD++ N+L+ + K+ DFG AR + N R P+ + APE +
Sbjct: 127 ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 186
Query: 178 PYNHTADLWSLGVILYELFV-GQPPF 202
+ +D+WS G++LYE+ G+ P+
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 106
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 107 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 166
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAM-SANTVVLRSIKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + A P
Sbjct: 167 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 226
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 286
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 287 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 316
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 12 VGEGSFGKVYKG---RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
+GEG FG V++G + VA+K K+ S+ QE +R+ H +I+++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 69 LDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
+ + ++ GEL L+ K L + A QL AL YL S R +HRD
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 516
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLW 186
+ +N+L+ + VKL DFG +R M +T S P+ +MAPE + + + +D+W
Sbjct: 517 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 576
Query: 187 SLGVILYELFV-GQPPFY---TNSVYALIRHIVKDPVKYPDEMSPNFKSFLKGLLNK 239
GV ++E+ + G PF N V I + + P M PN L L+ K
Sbjct: 577 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP------MPPNCPPTLYSLMTK 627
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 95
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 96 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 155
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 156 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 215
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 275
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 276 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 305
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 12/219 (5%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+++G G FG+V G K G+ VA+K +K G +EK + E I+ + H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIK-TLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+ ++TEF + G L L ++D Q+ + + + + YL +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANT---VVLRSIKGT-PL-YMAPELVREQPY 179
HR + +NIL+ + V K+ DFG +R + +T ++ G P+ + APE ++ + +
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 191
Query: 180 NHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKD 217
+D+WS G++++E+ G+ P++ + +I I +D
Sbjct: 192 TSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQD 230
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 129
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 130 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 189
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAM-SANTVVLRSIKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + A P
Sbjct: 190 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 249
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 309
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 310 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 339
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E+ +++ +G G FG+V+ G Y T +K G + +E +++ L+H
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGY--YNNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHD 67
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGELFEILEDDK----CLPEEQVQSIAKQLVRALHYL 118
++ + + ++TEF A+G L + L+ D+ LP ++ + Q+ + Y+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYI 125
Query: 119 HSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQ 177
IHRD++ N+L+ + K+ DFG AR + N R P+ + APE +
Sbjct: 126 ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 185
Query: 178 PYNHTADLWSLGVILYELFV-GQPPF 202
+ +++WS G++LYE+ G+ P+
Sbjct: 186 CFTIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 9 IELVGEGSFGKVYKGRRKYTGQTVAMKF---IMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
++++G G+FG VYKG G+TV + I+ K E I+ + H ++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 66 IEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRII 124
+ +L SP V G L E + + K + + + + Q+ + + YL R++
Sbjct: 103 VRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 162
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-PL-YMAPELVREQPYNHT 182
HRD+ +N+L+ + + VK+ DFG AR + + + G P+ +MA E + + + H
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 222
Query: 183 ADLWSLGVILYEL--FVGQP 200
+D+WS GV ++EL F G+P
Sbjct: 223 SDVWSYGVTIWELMTFGGKP 242
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 134/280 (47%), Gaps = 25/280 (8%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ-----TVAMKFIMKHGKSEKDIHNLRQEIEILRK 59
N + +G G+FGKV + G+ VA+K ++K + L E++I+
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK-MLKSTAHADEKEALMSELKIMSH 105
Query: 60 L-KHQNIIEMLDSFESPQEFCVVTEFA-QGELFEIL----------EDDKCLPEEQVQSI 107
L +H+NI+ +L + V+TE+ G+L L ED + L +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRSIKGT 165
+ Q+ + + +L S IHRD+ +N+L+ G V K+ DFG AR + +N +V + +
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 166 PLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--P 222
+MAPE + + Y +D+WS G++L+E+F +G P+ V + +VKD + P
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 285
Query: 223 DEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
N S ++ P +R T+ + F++E + E
Sbjct: 286 AFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQAQE 323
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 12 VGEGSFGKV-----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQNI 65
+G G+FGKV Y + TVA+K ++K + L E+++L L H NI
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVK-MLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 66 IEMLDSFESPQEFCVVTEFA-QGELFEILED-------DKCLPE-----------EQVQS 106
+ +L + V+TE+ G+L L K P E + S
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRSIKG 164
+ Q+ + + +L S IHRD+ +NIL+ G + K+CDFG AR + +N VV + +
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 165 TPLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY-- 221
+MAPE + Y +D+WS G+ L+ELF +G P+ V + ++K+ +
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 269
Query: 222 PDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
P+ +K + P R T+ +++
Sbjct: 270 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 127/279 (45%), Gaps = 33/279 (11%)
Query: 5 NYHVIELVGEGSFGKVYKGRR----KYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
N + +GEG+FG+V++ R Y T+ ++K S + ++E ++ +
Sbjct: 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 107
Query: 61 KHQNIIEMLDSFESPQEFCVVTEF-AQGELFEILED------------------------ 95
+ NI+++L + C++ E+ A G+L E L
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 96 DKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SA 154
L + IA+Q+ + YL + +HRD+ +N L+G VVK+ DFG +R + SA
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 155 NTVVLRSIKGTPL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIR 212
+ P+ +M PE + Y +D+W+ GV+L+E+F G P+Y + +I
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 287
Query: 213 HIVKDPVKYPDEMSP-NFKSFLKGLLNKVPQNRLTWSAL 250
++ + E P + ++ +K+P +R ++ ++
Sbjct: 288 YVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSI 326
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-PL- 167
Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R PL
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 168 YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--PDE 224
+MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + PD
Sbjct: 268 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 327
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+P + + P R T+S L+EH
Sbjct: 328 TTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-PL- 167
Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R PL
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 258
Query: 168 YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--PDE 224
+MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + PD
Sbjct: 259 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 318
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+P + + P R T+S L+EH
Sbjct: 319 TTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 10/213 (4%)
Query: 11 LVGEGSFGKVYKGRRKYTGQ---TVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIE 67
++G G FG+V GR K G+ VA+K +K G +EK + E I+ + H N++
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIK-TLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 68 MLDSFESPQEFCVVTEFAQ-GELFEIL-EDDKCLPEEQVQSIAKQLVRALHYLHSNRIIH 125
+ + +V EF + G L L + D Q+ + + + + YL +H
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVH 168
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVREQPYNHT 182
RD+ +NIL+ + V K+ DFG +R + + + + G + + APE ++ + +
Sbjct: 169 RDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSA 228
Query: 183 ADLWSLGVILYELF-VGQPPFYTNSVYALIRHI 214
+D+WS G++++E+ G+ P++ S +I+ I
Sbjct: 229 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 9 IELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
++ +G G FG V+ G VA+K I + SE+D +E E++ KL H ++++
Sbjct: 12 VQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 67
Query: 69 LDSFESPQEFCVVTEFAQ-GELFEILEDDKCL-PEEQVQSIAKQLVRALHYLHSNRIIHR 126
C+V EF + G L + L + L E + + + + YL +IHR
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 127
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G V+K+ DFG R + + + P+ + +PE+ Y+ +D+
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 186 WSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY-PDEMSPNFKSFLKGLLNKVPQN 243
WS GV+++E+F G+ P+ S ++ I Y P S + + + P++
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPED 247
Query: 244 RLTWSALLEH 253
R +S LL
Sbjct: 248 RPAFSRLLRQ 257
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 73
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDDKCLPEEQVQSI-----AKQLVRALH 116
I++ S + ++ E+ G L + L+ K E++ I Q+ + +
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGME 129
Query: 117 YLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPEL 173
YL + R IHR++ +NIL+ + VK+ DFG + + + ++ +P++ APE
Sbjct: 130 YLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 174 VREQPYNHTADLWSLGVILYELFV 197
+ E ++ +D+WS GV+LYELF
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
VG GSFG+V++ + K TG A+K K ++ + +E+ L I+ + +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRV-EELVACAGLSSPRIVPLYGA 118
Query: 72 F-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKP 130
E P + G L ++++ CLPE++ Q + L YLH+ RI+H D+K
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 178
Query: 131 QNILIGA-GSVVKLCDFGFA-----RAMSANTVVLRSIKGTPLYMAPELVREQPYNHTAD 184
N+L+ + GS LCDFG A + + + I GT +MAPE+V +P + D
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 238
Query: 185 LWSLGVILYELFVGQPPF 202
+WS ++ + G P+
Sbjct: 239 IWSSCCMMLHMLNGCHPW 256
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 9 IELVGEGSFGKVYKGRRKYTGQTVAMKF---IMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
++++G G+FG VYKG G+TV + I+ K E I+ + H ++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 66 IEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHSNRII 124
+ +L SP V G L E + + K + + + + Q+ + + YL R++
Sbjct: 80 VRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 139
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-PL-YMAPELVREQPYNHT 182
HRD+ +N+L+ + + VK+ DFG AR + + + G P+ +MA E + + + H
Sbjct: 140 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 199
Query: 183 ADLWSLGVILYEL--FVGQP 200
+D+WS GV ++EL F G+P
Sbjct: 200 SDVWSYGVTIWELMTFGGKP 219
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-PL- 167
Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R PL
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260
Query: 168 YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--PDE 224
+MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + PD
Sbjct: 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 320
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+P + + P R T+S L+EH
Sbjct: 321 TTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGT-PL- 167
Q+ + + +L S + IHRD+ +NIL+ +VVK+CDFG AR + + +R PL
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 168 YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY--PDE 224
+MAPE + ++ Y +D+WS GV+L+E+F +G P+ + +K+ + PD
Sbjct: 266 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 325
Query: 225 MSPNFKSFLKGLLNKVPQNRLTWSALLEH 253
+P + + P R T+S L+EH
Sbjct: 326 TTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 9/248 (3%)
Query: 9 IELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
++ +G G FG V+ G VA+K I + SE+D +E E++ KL H ++++
Sbjct: 10 VQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 65
Query: 69 LDSFESPQEFCVVTEFAQ-GELFEILEDDKCL-PEEQVQSIAKQLVRALHYLHSNRIIHR 126
C+V EF + G L + L + L E + + + + YL +IHR
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 125
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G V+K+ DFG R + + + P+ + +PE+ Y+ +D+
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 186 WSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY-PDEMSPNFKSFLKGLLNKVPQN 243
WS GV+++E+F G+ P+ S ++ I Y P S + + + P++
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPED 245
Query: 244 RLTWSALL 251
R +S LL
Sbjct: 246 RPAFSRLL 253
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 9 IELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
++ +G G FG V+ G VA+K I + SE+D +E E++ KL H ++++
Sbjct: 15 VQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 70
Query: 69 LDSFESPQEFCVVTEFAQ-GELFEILEDDKCL-PEEQVQSIAKQLVRALHYLHSNRIIHR 126
C+V EF + G L + L + L E + + + + YL +IHR
Sbjct: 71 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 130
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G V+K+ DFG R + + + P+ + +PE+ Y+ +D+
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 186 WSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY-PDEMSPNFKSFLKGLLNKVPQN 243
WS GV+++E+F G+ P+ S ++ I Y P S + + + P++
Sbjct: 191 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPED 250
Query: 244 RLTWSALLEH 253
R +S LL
Sbjct: 251 RPAFSRLLRQ 260
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 115
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 116 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 175
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG AR + + + P
Sbjct: 176 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 235
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 295
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 296 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 325
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 31/286 (10%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ-----TVAMKFIMKHGKSEKDIHNLRQEIEILRK 59
N + +G G+FGKV + G+ VA+K ++K + L E++I+
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK-MLKSTAHADEKEALMSELKIMSH 105
Query: 60 L-KHQNIIEMLDSFESPQEFCVVTEFA-QGELFEILEDDKCL-----------PEEQVQS 106
L +H+NI+ +L + V+TE+ G+L L + PEEQ+ S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 107 -----IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVL 159
+ Q+ + + +L S IHRD+ +N+L+ G V K+ DFG AR + +N +V
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 160 RSIKGTPLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDP 218
+ + +MAPE + + Y +D+WS G++L+E+F +G P+ V + +VKD
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 285
Query: 219 VKY--PDEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
+ P N S ++ P +R T+ + F++E + E
Sbjct: 286 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQAQE 329
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
VG GSFG+V++ + K TG A+K K ++ + +E+ L I+ + +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRV-EELVACAGLSSPRIVPLYGA 134
Query: 72 F-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKP 130
E P + G L ++++ CLPE++ Q + L YLH+ RI+H D+K
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 194
Query: 131 QNILIGA-GSVVKLCDFGFA-----RAMSANTVVLRSIKGTPLYMAPELVREQPYNHTAD 184
N+L+ + GS LCDFG A + + + I GT +MAPE+V +P + D
Sbjct: 195 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 254
Query: 185 LWSLGVILYELFVGQPPF 202
+WS ++ + G P+
Sbjct: 255 IWSSCCMMLHMLNGCHPW 272
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 12 VGEGSFGKV-----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQNI 65
+G G+FGKV Y + TVA+K ++K + L E+++L L H NI
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVK-MLKPSAHLTEREALMSELKVLSYLGNHMNI 105
Query: 66 IEMLDSFESPQEFCVVTEFA-QGELFEILED-------DKCLP-----------EEQVQS 106
+ +L + V+TE+ G+L L K P E + S
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRSIKG 164
+ Q+ + + +L S IHRD+ +NIL+ G + K+CDFG AR + +N VV + +
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 165 TPLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY-- 221
+MAPE + Y +D+WS G+ L+ELF +G P+ V + ++K+ +
Sbjct: 226 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 285
Query: 222 PDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
P+ +K + P R T+ +++
Sbjct: 286 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 110/200 (55%), Gaps = 13/200 (6%)
Query: 9 IELVGEGSFGKV----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ +G+G+FG V Y + TG+ VA+K ++H +E+ + + +EIEIL+ L+H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-KLQHS-TEEHLRDFEREIEILKSLQHDN 75
Query: 65 IIEMLDSFESP--QEFCVVTEF-AQGELFEILEDD-KCLPEEQVQSIAKQLVRALHYLHS 120
I++ S + ++ E+ G L + L+ + + ++ Q+ + + YL +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPLY-MAPELVREQ 177
R IHRD+ +NIL+ + VK+ DFG + + + ++ +P++ APE + E
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 178 PYNHTADLWSLGVILYELFV 197
++ +D+WS GV+LYELF
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 12 VGEGSFGKV-----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQNI 65
+G G+FGKV Y + TVA+K ++K + L E+++L L H NI
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVK-MLKPSAHLTEREALMSELKVLSYLGNHMNI 107
Query: 66 IEMLDSFESPQEFCVVTEFA-QGELFEILEDD-------KCLP-----------EEQVQS 106
+ +L + V+TE+ G+L L K P E + S
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRSIKG 164
+ Q+ + + +L S IHRD+ +NIL+ G + K+CDFG AR + +N VV + +
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 165 TPLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY-- 221
+MAPE + Y +D+WS G+ L+ELF +G P+ V + ++K+ +
Sbjct: 228 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 287
Query: 222 PDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
P+ +K + P R T+ +++
Sbjct: 288 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 9/248 (3%)
Query: 9 IELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEM 68
++ +G G FG V+ G VA+K I + SE D +E E++ KL H ++++
Sbjct: 32 VQEIGSGQFGLVHLGYW-LNKDKVAIKTIKEGSMSEDD---FIEEAEVMMKLSHPKLVQL 87
Query: 69 LDSFESPQEFCVVTEFAQ-GELFEILEDDKCL-PEEQVQSIAKQLVRALHYLHSNRIIHR 126
C+V EF + G L + L + L E + + + + YL +IHR
Sbjct: 88 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 147
Query: 127 DMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADL 185
D+ +N L+G V+K+ DFG R + + + P+ + +PE+ Y+ +D+
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 186 WSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPVKY-PDEMSPNFKSFLKGLLNKVPQN 243
WS GV+++E+F G+ P+ S ++ I Y P S + + + P++
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPED 267
Query: 244 RLTWSALL 251
R +S LL
Sbjct: 268 RPAFSRLL 275
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 4 ENYHVIELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILR 58
+N +I +G G+FG+VY+G+ + VA+K + SE+D + E I+
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIIS 89
Query: 59 KLKHQNIIEMLD-SFESPQEFCVVTEFAQGELFEILEDDKCLPEE-------QVQSIAKQ 110
K HQNI+ + S +S F ++ A G+L L + + P + + +A+
Sbjct: 90 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 111 LVRALHYLHSNRIIHRDMKPQNILI---GAGSVVKLCDFGFARAMSANTVVLRS-IKGTP 166
+ YL N IHRD+ +N L+ G G V K+ DFG A+ + + + P
Sbjct: 150 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLP 209
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYPDE 224
+ +M PE E + D WS GV+L+E+F +G P+ + S ++ + P +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269
Query: 225 MSPN-FKSFLKGLLNKVPQNRLTWSALLEH 253
P + P++R ++ +LE
Sbjct: 270 NCPGPVYRIMTQCWQHQPEDRPNFAIILER 299
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 12 VGEGSFGKV-----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQNI 65
+G G+FGKV Y + TVA+K ++K + L E+++L L H NI
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVK-MLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 66 IEMLDSFESPQEFCVVTEFA-QGELFEILED-------DKCLP-----------EEQVQS 106
+ +L + V+TE+ G+L L K P E + S
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRSIKG 164
+ Q+ + + +L S IHRD+ +NIL+ G + K+CDFG AR + +N VV + +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 165 TPLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY-- 221
+MAPE + Y +D+WS G+ L+ELF +G P+ V + ++K+ +
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 292
Query: 222 PDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
P+ +K + P R T+ +++
Sbjct: 293 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 31/271 (11%)
Query: 12 VGEGSFGKV-----YKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL-KHQNI 65
+G G+FGKV Y + TVA+K ++K + L E+++L L H NI
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVK-MLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 66 IEMLDSFESPQEFCVVTEFA-QGELFEILEDD-------KCLP-----------EEQVQS 106
+ +L + V+TE+ G+L L K P E + S
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 107 IAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRSIKG 164
+ Q+ + + +L S IHRD+ +NIL+ G + K+CDFG AR + +N VV + +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 165 TPLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKY-- 221
+MAPE + Y +D+WS G+ L+ELF +G P+ V + ++K+ +
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 292
Query: 222 PDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
P+ +K + P R T+ +++
Sbjct: 293 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 90/160 (56%), Gaps = 13/160 (8%)
Query: 102 EQVQSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS 161
E + S + Q+ R + +L S + IHRD+ +NIL+ +VVK+CDFG AR + N +R
Sbjct: 199 EDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVR- 257
Query: 162 IKGT---PL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPF----YTNSVYALIR 212
KG PL +MAPE + ++ Y+ +D+WS GV+L+E+F +G P+ + +R
Sbjct: 258 -KGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLR 316
Query: 213 HIVKDPVKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLE 252
++ ++ P+ +P + ++ P+ R ++ L+E
Sbjct: 317 EGMR--MRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 10/206 (4%)
Query: 7 HVIELVGEGSFGKVYKGRRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
H+ +++G G G+V GR + GQ VA+K +K G +E+ + E I+ + H
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIK-ALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILE-DDKCLPEEQVQSIAKQLVRALHYLHSN 121
NII + + +VTE+ + G L L D Q+ + + + + YL
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVREQP 178
+HRD+ +N+L+ + V K+ DFG +R + + + G + + APE + +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 179 YNHTADLWSLGVILYELFV-GQPPFY 203
++ +D+WS GV+++E+ G+ P++
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYW 256
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G GSFG+V++ + K TG A+K K ++ + +E+ L I+ + +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRV-EELVACAGLSSPRIVPLYGA 132
Query: 72 F-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKP 130
E P + G L ++++ CLPE++ Q + L YLH+ RI+H D+K
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 192
Query: 131 QNILIGA-GSVVKLCDFGFA-----RAMSANTVVLRSIKGTPLYMAPELVREQPYNHTAD 184
N+L+ + GS LCDFG A + + + I GT +MAPE+V +P + D
Sbjct: 193 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 252
Query: 185 LWSLGVILYELFVGQPPF 202
+WS ++ + G P+
Sbjct: 253 IWSSCCMMLHMLNGCHPW 270
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 9 IELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLKH 62
+E +GE FGKVYKG Q VA+K + K+E + R E + +L+H
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD--KAEGPLREEFRHEAMLRARLQH 71
Query: 63 QNIIEMLDSFESPQEFCVVTEF-AQGELFEIL------------EDDKCL-----PEEQV 104
N++ +L Q ++ + + G+L E L +DD+ + P + V
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 105 QSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFG-FARAMSANTVVLRSIK 163
+A Q+ + YL S+ ++H+D+ +N+L+ VK+ D G F +A+ L
Sbjct: 132 HLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 164 GTPL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPF--YTN-SVYALIRHIVKDP 218
P+ +MAPE + ++ +D+WS GV+L+E+F G P+ Y+N V +IR+ +
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN--RQV 248
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAW 266
+ PD+ + + N+ P R P K+ L AW
Sbjct: 249 LPCPDDCPAWVYALMIECWNEFPSRR---------PRFKDIHSRLRAW 287
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 9 IELVGEGSFGKVYKGR-----RKYTGQTVAMKFIMKHGKSEKDI-HNLRQEIEILRKLKH 62
+E +GE FGKVYKG Q VA+K + K+E + R E + +L+H
Sbjct: 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD--KAEGPLREEFRHEAMLRARLQH 88
Query: 63 QNIIEMLDSFESPQEFCVVTEF-AQGELFEIL------------EDDKCL-----PEEQV 104
N++ +L Q ++ + + G+L E L +DD+ + P + V
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 105 QSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFG-FARAMSANTVVLRSIK 163
+A Q+ + YL S+ ++H+D+ +N+L+ VK+ D G F +A+ L
Sbjct: 149 HLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 164 GTPL-YMAPELVREQPYNHTADLWSLGVILYELF-VGQPPF--YTN-SVYALIRHIVKDP 218
P+ +MAPE + ++ +D+WS GV+L+E+F G P+ Y+N V +IR+ +
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN--RQV 265
Query: 219 VKYPDEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDELNAW 266
+ PD+ + + N+ P R P K+ L AW
Sbjct: 266 LPCPDDCPAWVYALMIECWNEFPSRR---------PRFKDIHSRLRAW 304
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 10/206 (4%)
Query: 7 HVIELVGEGSFGKVYKGRRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
H+ +++G G G+V GR + GQ VA+K +K G +E+ + E I+ + H
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIK-ALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILE-DDKCLPEEQVQSIAKQLVRALHYLHSN 121
NII + + +VTE+ + G L L D Q+ + + + + YL
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 122 RIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---YMAPELVREQP 178
+HRD+ +N+L+ + V K+ DFG +R + + + G + + APE + +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 179 YNHTADLWSLGVILYELFV-GQPPFY 203
++ +D+WS GV+++E+ G+ P++
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYW 256
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 12/202 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQ-TVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G G FG V G K+ GQ VA+K I + SE + +E +++ L H+ ++++
Sbjct: 17 LGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYG 71
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ ++TE+ A G L L + + +Q+ + K + A+ YL S + +HRD+
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 131
Query: 129 KPQNILIGAGSVVKLCDFGFAR-AMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWS 187
+N L+ VVK+ DFG +R + R K + PE++ ++ +D+W+
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 188 LGVILYELF-VGQPPF--YTNS 206
GV+++E++ +G+ P+ +TNS
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNS 213
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 129/275 (46%), Gaps = 41/275 (14%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ I ++G+G+FG+V K R + A+K I +H +E+ + + E+ +L L HQ
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RH--TEEKLSTILSEVXLLASLNHQY 63
Query: 65 IIEMLDSFESPQEFCV--------VTEFAQGE------LFEILEDDKCLPE-EQVQSIAK 109
++ ++ + F T F Q E L++++ + + ++ + +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLR--------- 160
Q++ AL Y+HS IIHR++KP NI I VK+ DFG A+ + + +L+
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 161 -----SIKGTPLYMAPELVR-EQPYNHTADLWSLGVILYELFVGQPPFYTN----SVYAL 210
S GT Y+A E++ YN D +SLG+I +E PF T ++
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKK 240
Query: 211 IRHI-VKDPVKYPDEMSPNFKSFLKGLLNKVPQNR 244
+R + ++ P + D K ++ L++ P R
Sbjct: 241 LRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKR 275
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 54/264 (20%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+ Y + + +G GSFG V + +G+ A+K +++ + + +E++I++ L H
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN------RELDIMKVLDHV 60
Query: 64 NIIEMLDSF-----ESPQE---------------------------------FCVVTEFA 85
NII+++D F E P+ V+ E+
Sbjct: 61 NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 86 QGELFEILED----DKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQNILIGA-GSV 140
L ++L+ + +P + QL RA+ ++HS I HRD+KPQN+L+ + +
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 141 VKLCDFGFARAMSANTVVLRSIKGTPLYMAPEL-VREQPYNHTADLWSLGVILYELFVGQ 199
+KLCDFG A+ + + + I + Y APEL + Y + DLWS+G + EL +G+
Sbjct: 181 LKLCDFGSAKKLIPSEPSVAXI-CSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
Query: 200 PPFY-TNSVYALIR--HIVKDPVK 220
P F S+ L+R I+ P K
Sbjct: 240 PLFSGETSIDQLVRIIQIMGTPTK 263
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G FG+V+ Y T MK G + E +++ L+H +++ L +
Sbjct: 23 LGAGQFGEVWMA--TYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVK-LHA 77
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ + ++TEF A+G L + L+ D+ P ++ + Q+ + ++ IHRD+
Sbjct: 78 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+ NIL+ A V K+ DFG AR + N R P+ + APE + + +D+WS
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 197
Query: 188 LGVILYELFV-GQPPFYTNSVYALIR 212
G++L E+ G+ P+ S +IR
Sbjct: 198 FGILLMEIVTYGRIPYPGMSNPEVIR 223
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+N+ ++G G FGKVYKGR G VA+K +K + + + E+E++ H+
Sbjct: 38 DNFSNKNILGRGGFGKVYKGRLA-DGTLVAVK-RLKEERXQGGELQFQTEVEMISMAVHR 95
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGE----LFEILEDDKCLPEEQVQSIAKQLVRALHYL 118
N++ + +P E +V + A G L E E L + Q IA R L YL
Sbjct: 96 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYL 155
Query: 119 HSN---RIIHRDMKPQNILIGAGSVVKLCDFGFARAMS-ANTVVLRSIKGTPLYMAPELV 174
H + +IIHRD+K NIL+ + DFG A+ M + V +++GT ++APE +
Sbjct: 156 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYL 215
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
+ D++ GV+L EL GQ F
Sbjct: 216 STGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G FG+V+ Y T MK G + E +++ L+H +++ L +
Sbjct: 196 LGAGQFGEVWMA--TYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVK-LHA 250
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ + ++TEF A+G L + L+ D+ P ++ + Q+ + ++ IHRD+
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+ NIL+ A V K+ DFG AR + N R P+ + APE + + +D+WS
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 370
Query: 188 LGVILYELFV-GQPPFYTNSVYALIR 212
G++L E+ G+ P+ S +IR
Sbjct: 371 FGILLMEIVTYGRIPYPGMSNPEVIR 396
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 111/212 (52%), Gaps = 14/212 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQ-TVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G G FG V G K+ GQ VA+K I + SE + +E +++ L H+ ++++
Sbjct: 32 LGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYG 86
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ ++TE+ A G L L + + +Q+ + K + A+ YL S + +HRD+
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 146
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+N L+ VVK+ DFG +R + + P+ + PE++ ++ +D+W+
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 188 LGVILYELF-VGQPPF--YTNSVYALIRHIVK 216
GV+++E++ +G+ P+ +TNS A HI +
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSETA--EHIAQ 236
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 38/293 (12%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ-----TVAMKFIMKHGKSEKDIHNLRQEIEILRK 59
N + +G G+FGKV + G+ VA+K ++K + L E++I+
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK-MLKSTAHADEKEALMSELKIMSH 90
Query: 60 L-KHQNIIEMLDSFESPQEFCVVTEFA-QGELFEIL-----------------------E 94
L +H+NI+ +L + V+TE+ G+L L E
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 95 DDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-- 152
D + L + + Q+ + + +L S IHRD+ +N+L+ G V K+ DFG AR +
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 153 SANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALI 211
+N +V + + +MAPE + + Y +D+WS G++L+E+F +G P+ V +
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 270
Query: 212 RHIVKDPVKY--PDEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
+VKD + P N S ++ P +R T+ + F++E + E
Sbjct: 271 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQAQE 321
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ-----TVAMKFIMKHGKSEKDIHNLRQEIEILRK 59
N + +G G+FGKV + G+ VA+K ++K + L E++I+
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK-MLKSTAHADEKEALMSELKIMSH 105
Query: 60 L-KHQNIIEMLDSFESPQEFCVVTEFA-QGELF-------EILEDD-------KCLPEEQ 103
L +H+NI+ +L + V+TE+ G+L +LE D L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 104 VQSIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRS 161
+ + Q+ + + +L S IHRD+ +N+L+ G V K+ DFG AR + +N +V +
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 162 IKGTPLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVK 220
+ +MAPE + + Y +D+WS G++L+E+F +G P+ V + +VKD +
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 285
Query: 221 Y--PDEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
P N S ++ P +R T+ + F++E + E
Sbjct: 286 MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQAQE 327
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
+N+ ++G G FGKVYKGR G VA+K +K +++ + E+E++ H+
Sbjct: 30 DNFXNKNILGRGGFGKVYKGRLA-DGXLVAVKR-LKEERTQGGELQFQTEVEMISMAVHR 87
Query: 64 NIIEMLDSFESPQEFCVVTEF-AQGE----LFEILEDDKCLPEEQVQSIAKQLVRALHYL 118
N++ + +P E +V + A G L E E L + Q IA R L YL
Sbjct: 88 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYL 147
Query: 119 HSN---RIIHRDMKPQNILIGAGSVVKLCDFGFARAMS-ANTVVLRSIKGTPLYMAPELV 174
H + +IIHRD+K NIL+ + DFG A+ M + V +++G ++APE +
Sbjct: 148 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYL 207
Query: 175 REQPYNHTADLWSLGVILYELFVGQPPF 202
+ D++ GV+L EL GQ F
Sbjct: 208 STGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 111/212 (52%), Gaps = 14/212 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQ-TVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G G FG V G K+ GQ VA+K I + SE + +E +++ L H+ ++++
Sbjct: 16 LGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYG 70
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ ++TE+ A G L L + + +Q+ + K + A+ YL S + +HRD+
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 130
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+N L+ VVK+ DFG +R + + P+ + PE++ ++ +D+W+
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 188 LGVILYELF-VGQPPF--YTNSVYALIRHIVK 216
GV+++E++ +G+ P+ +TNS A HI +
Sbjct: 191 FGVLMWEIYSLGKMPYERFTNSETA--EHIAQ 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 31/257 (12%)
Query: 12 VGEGSFGKVYKGRRKYTGQ-TVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G G FG V G K+ GQ VA+K I + SE + +E +++ L H+ ++++
Sbjct: 17 LGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYG 71
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ ++TE+ A G L L + + +Q+ + K + A+ YL S + +HRD+
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 131
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+N L+ VVK+ DFG +R + + P+ + PE++ ++ +D+W+
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 188 LGVILYELF-VGQPPF--YTNSVYA--------LIR-HIVKDPV---------KYPDEMS 226
GV+++E++ +G+ P+ +TNS A L R H+ + V + DE
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADE-R 250
Query: 227 PNFKSFLKGLLNKVPQN 243
P FK L +L+ + +N
Sbjct: 251 PTFKILLSNILDVMDEN 267
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 29/258 (11%)
Query: 12 VGEGSFGKVYKGR-----RKYTGQTVAMKFIMK-HGKSEKDIHNLRQEIEILRKLKHQNI 65
+GEG+FGKV+ + VA+K + + KD H +E E+L L+H++I
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH---REAELLTNLQHEHI 77
Query: 66 IEMLDSFESPQEFCVVTEFAQ-GELFEILE---DDKCL------PEEQVQS----IAKQL 111
++ +V E+ + G+L + L D L P E QS IA+Q+
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 112 VRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL---Y 168
+ YL S +HRD+ +N L+G +VK+ DFG +R + + T R T L +
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYS-TDYYRVGGHTMLPIRW 196
Query: 169 MAPELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPV-KYPDEMS 226
M PE + + + +D+WSLGV+L+E+F G+ P+Y S +I I + V + P
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCP 256
Query: 227 PNFKSFLKGLLNKVPQNR 244
+ G + P R
Sbjct: 257 QEVYELMLGCWQREPHMR 274
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLR-QEIEILRKLKHQNIIEMLD 70
+G GSFG+V++ K TG A+K + + R +E+ L I+ +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR--------LEVFRAEELMACAGLTSPRIVPLYG 133
Query: 71 SF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMK 129
+ E P + G L +++++ CLPE++ Q + L YLHS RI+H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 130 PQNILIGA-GSVVKLCDFGFA-----RAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
N+L+ + GS LCDFG A + + + I GT +MAPE+V + +
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKV 253
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPV---KYPDEMSPNFKSFLKGLLNKV 240
D+WS ++ + G P+ L I +P + P +P ++ L K
Sbjct: 254 DVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKE 313
Query: 241 PQNRLTWSAL 250
P +R++ + L
Sbjct: 314 PIHRVSAAEL 323
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 10/226 (4%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEML 69
E +G G+FG+V+ GR + VA+K + + L QE IL++ H NI+ ++
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL-QEARILKQYSHPNIVRLI 178
Query: 70 DSFESPQEFCVVTEFAQG-ELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
Q +V E QG + L + L + + + + YL S IHRD
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPL-YMAPELVREQPYNHTAD 184
+ +N L+ +V+K+ DFG +R A+ V S ++ P+ + APE + Y+ +D
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSRE-EADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 185 LWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYP-DEMSPN 228
+WS G++L+E F +G P Y N R V+ + P E+ P+
Sbjct: 298 VWSFGILLWETFSLGASP-YPNLSNQQTREFVEKGGRLPCPELCPD 342
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 111/212 (52%), Gaps = 14/212 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQ-TVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G G FG V G K+ GQ VA+K I + SE + +E +++ L H+ ++++
Sbjct: 23 LGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYG 77
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ ++TE+ A G L L + + +Q+ + K + A+ YL S + +HRD+
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 137
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+N L+ VVK+ DFG +R + + P+ + PE++ ++ +D+W+
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 188 LGVILYELF-VGQPPF--YTNSVYALIRHIVK 216
GV+++E++ +G+ P+ +TNS A HI +
Sbjct: 198 FGVLMWEIYSLGKMPYERFTNSETA--EHIAQ 227
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 10/226 (4%)
Query: 10 ELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEML 69
E +G G+FG+V+ GR + VA+K + + L QE IL++ H NI+ ++
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL-QEARILKQYSHPNIVRLI 178
Query: 70 DSFESPQEFCVVTEFAQG-ELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIHRD 127
Q +V E QG + L + L + + + + YL S IHRD
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 128 MKPQNILIGAGSVVKLCDFGFARAMSANTVVLRS--IKGTPL-YMAPELVREQPYNHTAD 184
+ +N L+ +V+K+ DFG +R A+ V S ++ P+ + APE + Y+ +D
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 185 LWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVKYP-DEMSPN 228
+WS G++L+E F +G P Y N R V+ + P E+ P+
Sbjct: 298 VWSFGILLWETFSLGASP-YPNLSNQQTREFVEKGGRLPCPELCPD 342
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 12 VGEGSFGKVYKGRRKYTGQ-TVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G G FG V G K+ GQ VA+K I + SE + +E +++ L H+ ++++
Sbjct: 12 LGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYG 66
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ ++TE+ A G L L + + +Q+ + K + A+ YL S + +HRD+
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 126
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+N L+ VVK+ DFG +R + + P+ + PE++ ++ +D+W+
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 188 LGVILYELF-VGQPPF--YTNS 206
GV+++E++ +G+ P+ +TNS
Sbjct: 187 FGVLMWEIYSLGKMPYERFTNS 208
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 111/212 (52%), Gaps = 14/212 (6%)
Query: 12 VGEGSFGKVYKGRRKYTGQ-TVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
+G G FG V G K+ GQ VA+K I + SE + +E +++ L H+ ++++
Sbjct: 32 LGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYG 86
Query: 71 SFESPQEFCVVTEF-AQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ ++TE+ A G L L + + +Q+ + K + A+ YL S + +HRD+
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 146
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPYNHTADLWS 187
+N L+ VVK+ DFG +R + + P+ + PE++ ++ +D+W+
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 188 LGVILYELF-VGQPPF--YTNSVYALIRHIVK 216
GV+++E++ +G+ P+ +TNS A HI +
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSETA--EHIAQ 236
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLR-QEIEILRKLKHQNIIEMLD 70
+G GSFG+V++ K TG A+K + + R +E+ L I+ +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR--------LEVFRAEELMACAGLTSPRIVPLYG 152
Query: 71 SF-ESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDMK 129
+ E P + G L +++++ CLPE++ Q + L YLHS RI+H D+K
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 130 PQNILIGA-GSVVKLCDFGFA-----RAMSANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
N+L+ + GS LCDFG A + + + I GT +MAPE+V + +
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKV 272
Query: 184 DLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPV---KYPDEMSPNFKSFLKGLLNKV 240
D+WS ++ + G P+ L I +P + P +P ++ L K
Sbjct: 273 DVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKE 332
Query: 241 PQNRLTWSAL 250
P +R++ + L
Sbjct: 333 PIHRVSAAEL 342
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQ-EIEILRKL- 60
++ Y + L+G+GSFG+V K + + VA+K I K++K N Q E+ +L +
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII----KNKKAFLNQAQIEVRLLELMN 89
Query: 61 KHQN-----IIEMLDSFESPQEFCVVTEFAQGELFEILEDD--KCLPEEQVQSIAKQLVR 113
KH I+ + F C+V E L+++L + + + + A+Q+
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 114 ALHYLHSNR--IIHRDMKPQNILI--GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYM 169
AL +L + IIH D+KP+NIL+ S +K+ DFG + + + + I+ + Y
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR--IYQXIQ-SRFYR 206
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPF 202
+PE++ PY+ D+WSLG IL E+ G+P F
Sbjct: 207 SPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 239
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQ-EIEILRKL- 60
++ Y + L+G+GSFG+V K + + VA+K I K++K N Q E+ +L +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII----KNKKAFLNQAQIEVRLLELMN 108
Query: 61 KHQN-----IIEMLDSFESPQEFCVVTEFAQGELFEILEDD--KCLPEEQVQSIAKQLVR 113
KH I+ + F C+V E L+++L + + + + A+Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 114 ALHYLHSNR--IIHRDMKPQNILI--GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYM 169
AL +L + IIH D+KP+NIL+ S +K+ DFG + + + + I+ + Y
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR--IYQXIQ-SRFYR 225
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPF 202
+PE++ PY+ D+WSLG IL E+ G+P F
Sbjct: 226 SPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQ-----TVAMKFIMKHGKSEKDIHNLRQEIEILRK 59
N + +G G+FGKV + G+ VA+K ++K + L E++I+
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK-MLKSTAHADEKEALMSELKIMSH 105
Query: 60 L-KHQNIIEMLDSFESPQEFCVVTEFA-QGELFEILE-DDKCLPEEQVQSIAK------- 109
L +H+NI+ +L + V+TE+ G+L L + L + +IA
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 110 ------QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM--SANTVVLRS 161
Q+ + + +L S IHRD+ +N+L+ G V K+ DFG AR + +N +V +
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 162 IKGTPLYMAPELVREQPYNHTADLWSLGVILYELF-VGQPPFYTNSVYALIRHIVKDPVK 220
+ +MAPE + + Y +D+WS G++L+E+F +G P+ V + +VKD +
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 285
Query: 221 Y--PDEMSPNFKSFLKGLLNKVPQNRLTWSALLEHPFVKETSDE 262
P N S ++ P +R T+ + F++E + E
Sbjct: 286 MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQAQE 327
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 8 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 63
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 64 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 242
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 243 KERPEDRPTFDYL 255
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 13 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 68
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 69 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 247
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 248 KERPEDRPTFDYL 260
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 9/201 (4%)
Query: 9 IELVGEGSFGKVYKG--RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
IEL G G+FG V +G R + VA+K ++K G + D + +E +I+ +L + I+
Sbjct: 16 IEL-GCGNFGSVRQGVYRMRKKQIDVAIK-VLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 67 EMLDSFESPQEFCVVTEFAQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIH 125
++ ++ V+ G L + L + +P V + Q+ + YL +H
Sbjct: 74 RLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPL-YMAPELVREQPYNHT 182
RD+ +N+L+ K+ DFG ++A+ A+ RS PL + APE + + ++
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 183 ADLWSLGVILYE-LFVGQPPF 202
+D+WS GV ++E L GQ P+
Sbjct: 194 SDVWSYGVTMWEALSYGQKPY 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 14 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 69
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 70 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 188
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 248
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 249 KERPEDRPTFDYL 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 15 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 70
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 71 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 189
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 249
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 250 KERPEDRPTFDYL 262
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 13 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 68
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 69 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 247
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 248 KERPEDRPTFDYL 260
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 15/256 (5%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQ-TVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH 62
E +++ +G G FG V G K+ GQ VA+K I + SE + QE + + KL H
Sbjct: 8 EEITLLKELGSGQFGVVKLG--KWKGQYDVAVKMIKEGSMSEDEFF---QEAQTMMKLSH 62
Query: 63 QNIIEMLDSFESPQEFCVVTEF-AQGELFEILEDD-KCLPEEQVQSIAKQLVRALHYLHS 120
+++ +VTE+ + G L L K L Q+ + + + +L S
Sbjct: 63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES 122
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
++ IHRD+ +N L+ VK+ DFG R + + V P+ + APE+ Y
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 180 NHTADLWSLGVILYELF-VGQPPF--YTNSVYALIRHIVKDPVKY-PDEMSPNFKSFLKG 235
+ +D+W+ G++++E+F +G+ P+ YTNS ++ + + Y P S +
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVVLKVSQGHRLYRPHLASDTIYQIMYS 240
Query: 236 LLNKVPQNRLTWSALL 251
+++P+ R T+ LL
Sbjct: 241 CWHELPEKRPTFQQLL 256
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 19 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 74
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 75 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 193
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 253
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 254 KERPEDRPTFDYL 266
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 18 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 73
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 74 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 192
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 193 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 252
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 253 KERPEDRPTFDYL 265
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 3 VENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQ-EIEILRKL- 60
++ Y + L+G+GSFG+V K + + VA+K I K++K N Q E+ +L +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII----KNKKAFLNQAQIEVRLLELMN 108
Query: 61 KHQN-----IIEMLDSFESPQEFCVVTEFAQGELFEILEDD--KCLPEEQVQSIAKQLVR 113
KH I+ + F C+V E L+++L + + + + A+Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 114 ALHYLHSNR--IIHRDMKPQNILI--GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYM 169
AL +L + IIH D+KP+NIL+ +K+ DFG + + + + I+ + Y
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQR--IYQXIQ-SRFYR 225
Query: 170 APELVREQPYNHTADLWSLGVILYELFVGQPPF 202
+PE++ PY+ D+WSLG IL E+ G+P F
Sbjct: 226 SPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 59/299 (19%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKH- 62
++Y ++ +G G + +V++ + V +K I+K K K +++EI+IL L+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-ILKPVKKNK----IKREIKILENLRGG 91
Query: 63 QNIIEMLDSFESP--QEFCVVTEFAQGELFEILEDDKCLPEEQVQSIAKQLVRALHYLHS 120
NII + D + P + +V E F+ L + L + ++ ++++AL Y HS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY--QTLTDYDIRFYMYEILKALDYCHS 149
Query: 121 NRIIHRDMKPQNILIG-AGSVVKLCDFGFARAMSANT-----VVLRSIKGTPLYMAPELV 174
I+HRD+KP N++I ++L D+G A V R KG L LV
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL-----LV 204
Query: 175 REQPYNHTADLWSLGVILYEL-FVGQPPFYTNSVYALIRHIVK--------DPV-KYPDE 224
Q Y+++ D+WSLG +L + F +P F+ + Y + I K D + KY E
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 225 MSPNFK----------------------------SFLKGLLNKVPQNRLTWSALLEHPF 255
+ P F FL LL Q+RLT +EHP+
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 22 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 77
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 78 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 196
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 256
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 257 KERPEDRPTFDYL 269
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 30/261 (11%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-----VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+GEG+FGKV+ T VA+K + + + + ++E E+L L+H++I+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK--DFQREAELLTNLQHEHIV 80
Query: 67 EMLDSFESPQEFCVVTEF-----------AQGELFEILEDDKC------LPEEQVQSIAK 109
+ +V E+ A G IL D + L Q+ IA
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-- 167
Q+ + YL S +HRD+ +N L+GA +VK+ DFG +R + + T R T L
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYS-TDYYRVGGHTMLPI 199
Query: 168 -YMAPELVREQPYNHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKDPV-KYPDE 224
+M PE + + + +D+WS GVIL+E+F G+ P++ S +I I + V + P
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRV 259
Query: 225 MSPNFKSFLKGLLNKVPQNRL 245
+ G + PQ RL
Sbjct: 260 CPKEVYDVMLGCWQREPQQRL 280
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 13 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 68
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 69 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 247
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 248 KERPEDRPTFDYL 260
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 21 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 76
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 77 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 195
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 255
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 256 KERPEDRPTFDYL 268
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 23 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 78
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 79 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 198 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 257
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 258 KERPEDRPTFDYL 270
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 19 ETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 74
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 75 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 193
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 253
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 254 KERPEDRPTFDYL 266
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G FG+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 9 ETLKLVERLGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 64
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 65 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHR+++ NIL+ K+ DFG AR + N R P+ + APE + +
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 243
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 244 KERPEDRPTFDYL 256
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 11 LVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
L+G G FGKVYKG + G VA+K + +S + I EIE L +H +++ ++
Sbjct: 46 LIGHGVFGKVYKGVLR-DGAKVALK--RRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 71 SFESPQEFCVVTEFAQ-GELFEILEDDK----CLPEEQVQSIAKQLVRALHYLHSNRIIH 125
+ E ++ ++ + G L L + EQ I R LHYLH+ IIH
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMS--ANTVVLRSIKGTPLYMAPELVREQPYNHTA 183
RD+K NIL+ V K+ DFG ++ + T + +KGT Y+ PE + +
Sbjct: 163 RDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKS 222
Query: 184 DLWSLGVILYELF 196
D++S GV+L+E+
Sbjct: 223 DVYSFGVVLFEVL 235
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 11 LVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLD 70
L+G G FGKVYKG + G VA+K + +S + I EIE L +H +++ ++
Sbjct: 46 LIGHGVFGKVYKGVLR-DGAKVALK--RRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 71 SFESPQEFCVVTEFAQ-GELFEILEDDK----CLPEEQVQSIAKQLVRALHYLHSNRIIH 125
+ E ++ ++ + G L L + EQ I R LHYLH+ IIH
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSA--NTVVLRSIKGTPLYMAPELVREQPYNHTA 183
RD+K NIL+ V K+ DFG ++ + T + +KGT Y+ PE + +
Sbjct: 163 RDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKS 222
Query: 184 DLWSLGVILYELF 196
D++S GV+L+E+
Sbjct: 223 DVYSFGVVLFEVL 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKG--RRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILR 58
E ++ +G+GSFG VY+G R G+ VA+K + + + I L E +++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMK 75
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQSI--- 107
+++ +L Q VV E A G+L L E++ P +Q +
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TP 166
A ++ + YL++ + +HRD+ +N ++ VK+ DFG R + + KG P
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYEL 195
+ +MAPE +++ + ++D+WS GV+L+E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKG--RRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILR 58
E ++ +G+GSFG VY+G R G+ VA+K + + + I L E +++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMK 75
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQSI--- 107
+++ +L Q VV E A G+L L E++ P +Q +
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TP 166
A ++ + YL++ + +HRD+ +N ++ VK+ DFG R + + KG P
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYEL 195
+ +MAPE +++ + ++D+WS GV+L+E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 9/201 (4%)
Query: 9 IELVGEGSFGKVYKG--RRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
IEL G G+FG V +G R + VA+K ++K G + D + +E +I+ +L + I+
Sbjct: 342 IEL-GCGNFGSVRQGVYRMRKKQIDVAIK-VLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 67 EMLDSFESPQEFCVVTEFAQGELFEILEDDKC-LPEEQVQSIAKQLVRALHYLHSNRIIH 125
++ ++ V+ G L + L + +P V + Q+ + YL +H
Sbjct: 400 RLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459
Query: 126 RDMKPQNILIGAGSVVKLCDFGFARAMSANT--VVLRSIKGTPL-YMAPELVREQPYNHT 182
R++ +N+L+ K+ DFG ++A+ A+ RS PL + APE + + ++
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 183 ADLWSLGVILYE-LFVGQPPF 202
+D+WS GV ++E L GQ P+
Sbjct: 520 SDVWSYGVTMWEALSYGQKPY 540
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 12 VGEGSFGKVYKGR-RKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKHQNIIEML 69
+G G+FG V KG + I+K+ ++ + + L E ++++L + I+ M+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 70 DSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
E+ + + +V E A+ G L + L+ ++ + ++ + + Q+ + YL + +HRD+
Sbjct: 85 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 143
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI---KGTPLYMAPELVREQPYNHTADL 185
+N+L+ K+ DFG ++A+ A+ ++ K + APE + ++ +D+
Sbjct: 144 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 203
Query: 186 WSLGVILYELF-VGQPPF 202
WS GV+++E F GQ P+
Sbjct: 204 WSFGVLMWEAFSYGQKPY 221
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 12 VGEGSFGKVYKGR-RKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKHQNIIEML 69
+G G+FG V KG + I+K+ ++ + + L E ++++L + I+ M+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 70 DSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
E+ + + +V E A+ G L + L+ ++ + ++ + + Q+ + YL + +HRD+
Sbjct: 79 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 137
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI---KGTPLYMAPELVREQPYNHTADL 185
+N+L+ K+ DFG ++A+ A+ ++ K + APE + ++ +D+
Sbjct: 138 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 197
Query: 186 WSLGVILYELF-VGQPPF 202
WS GV+++E F GQ P+
Sbjct: 198 WSFGVLMWEAFSYGQKPY 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 12 VGEGSFGKVYKGR-RKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKHQNIIEML 69
+G G+FG V KG + I+K+ ++ + + L E ++++L + I+ M+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 70 DSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
E+ + + +V E A+ G L + L+ ++ + ++ + + Q+ + YL + +HRD+
Sbjct: 95 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 153
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI---KGTPLYMAPELVREQPYNHTADL 185
+N+L+ K+ DFG ++A+ A+ ++ K + APE + ++ +D+
Sbjct: 154 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 213
Query: 186 WSLGVILYELF-VGQPPF 202
WS GV+++E F GQ P+
Sbjct: 214 WSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 12 VGEGSFGKVYKGR-RKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKHQNIIEML 69
+G G+FG V KG + I+K+ ++ + + L E ++++L + I+ M+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 70 DSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
E+ + + +V E A+ G L + L+ ++ + ++ + + Q+ + YL + +HRD+
Sbjct: 95 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 153
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI---KGTPLYMAPELVREQPYNHTADL 185
+N+L+ K+ DFG ++A+ A+ ++ K + APE + ++ +D+
Sbjct: 154 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 213
Query: 186 WSLGVILYELF-VGQPPF 202
WS GV+++E F GQ P+
Sbjct: 214 WSFGVLMWEAFSYGQKPY 231
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 12 VGEGSFGKVYKGR-RKYTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKHQNIIEML 69
+G G+FG V KG + I+K+ ++ + + L E ++++L + I+ M+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 70 DSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
E+ + + +V E A+ G L + L+ ++ + ++ + + Q+ + YL + +HRD+
Sbjct: 75 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 133
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI---KGTPLYMAPELVREQPYNHTADL 185
+N+L+ K+ DFG ++A+ A+ ++ K + APE + ++ +D+
Sbjct: 134 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 193
Query: 186 WSLGVILYELF-VGQPPF 202
WS GV+++E F GQ P+
Sbjct: 194 WSFGVLMWEAFSYGQKPY 211
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKG--RRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILR 58
E ++ +G+GSFG VY+G R G+ VA+K + + + I L E +++
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMK 72
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQSI--- 107
+++ +L Q VV E A G+L L E++ P +Q +
Sbjct: 73 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 132
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TP 166
A ++ + YL++ + +HRD+ +N ++ VK+ DFG R + + KG P
Sbjct: 133 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYEL 195
+ +MAPE +++ + ++D+WS GV+L+E+
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKG--RRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILR 58
E ++ +G+GSFG VY+G R G+ VA+K + + + I L E +++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMK 75
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQSI--- 107
+++ +L Q VV E A G+L L E++ P +Q +
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TP 166
A ++ + YL++ + +HRD+ +N ++ VK+ DFG R + + KG P
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLP 195
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYEL 195
+ +MAPE +++ + ++D+WS GV+L+E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 12 VGEGSFGKVYKGRRK-YTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKHQNIIEML 69
+G G+FG V KG + I+K+ ++ + + L E ++++L + I+ M+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 70 DSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
E+ + + +V E A+ G L + L+ ++ + ++ + + Q+ + YL + +HRD+
Sbjct: 73 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 131
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI---KGTPLYMAPELVREQPYNHTADL 185
+N+L+ K+ DFG ++A+ A+ ++ K + APE + ++ +D+
Sbjct: 132 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 191
Query: 186 WSLGVILYELF-VGQPPF 202
WS GV+++E F GQ P+
Sbjct: 192 WSFGVLMWEAFSYGQKPY 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 12 VGEGSFGKVYKGRRK-YTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKHQNIIEML 69
+G G+FG V KG + I+K+ ++ + + L E ++++L + I+ M+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 70 DSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
E+ + + +V E A+ G L + L+ ++ + ++ + + Q+ + YL + +HRD+
Sbjct: 79 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 137
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI---KGTPLYMAPELVREQPYNHTADL 185
+N+L+ K+ DFG ++A+ A+ ++ K + APE + ++ +D+
Sbjct: 138 AARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDV 197
Query: 186 WSLGVILYELF-VGQPPF 202
WS GV+++E F GQ P+
Sbjct: 198 WSFGVLMWEAFSYGQKPY 215
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKG--RRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILR 58
E ++ +G+GSFG VY+G R G+ VA+K + + + I L E +++
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMK 74
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQSI--- 107
+++ +L Q VV E A G+L L E++ P +Q +
Sbjct: 75 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 134
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TP 166
A ++ + YL++ + +HRD+ +N ++ VK+ DFG R + + KG P
Sbjct: 135 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYEL 195
+ +MAPE +++ + ++D+WS GV+L+E+
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKG--RRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILR 58
E ++ +G+GSFG VY+G R G+ VA+K + + + I L E +++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMK 75
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQSI--- 107
+++ +L Q VV E A G+L L E++ P +Q +
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TP 166
A ++ + YL++ + +HRD+ +N ++ VK+ DFG R + + KG P
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYEL 195
+ +MAPE +++ + ++D+WS GV+L+E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 12 VGEGSFGKVYKGRRK-YTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKHQNIIEML 69
+G G+FG V KG + I+K+ ++ + + L E ++++L + I+ M+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 70 DSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
E+ + + +V E A+ G L + L+ ++ + ++ + + Q+ + YL + +HRD+
Sbjct: 93 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 151
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI---KGTPLYMAPELVREQPYNHTADL 185
+N+L+ K+ DFG ++A+ A+ ++ K + APE + ++ +D+
Sbjct: 152 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 211
Query: 186 WSLGVILYELF-VGQPPF 202
WS GV+++E F GQ P+
Sbjct: 212 WSFGVLMWEAFSYGQKPY 229
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 87
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 88 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 145
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL---YMAP 171
YL S + +HRD+ +N ++ VK+ DFG AR M + + G L +MA
Sbjct: 146 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 265
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 106
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 107 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 164
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL---YMAP 171
YL S + +HRD+ +N ++ VK+ DFG AR M + + G L +MA
Sbjct: 165 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 284
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 12 VGEGSFGKVYKGRRK-YTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKHQNIIEML 69
+G G+FG V KG + I+K+ ++ + + L E ++++L + I+ M+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 70 DSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
E+ + + +V E A+ G L + L+ ++ + ++ + + Q+ + YL + +HRD+
Sbjct: 437 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 495
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI---KGTPLYMAPELVREQPYNHTADL 185
+N+L+ K+ DFG ++A+ A+ ++ K + APE + ++ +D+
Sbjct: 496 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 555
Query: 186 WSLGVILYELF-VGQPPF 202
WS GV+++E F GQ P+
Sbjct: 556 WSFGVLMWEAFSYGQKPY 573
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 12 VGEGSFGKVYKGRRK-YTGQTVAMKFIMKHGKSEKDIHN-LRQEIEILRKLKHQNIIEML 69
+G G+FG V KG + I+K+ ++ + + L E ++++L + I+ M+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 70 DSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
E+ + + +V E A+ G L + L+ ++ + ++ + + Q+ + YL + +HRD+
Sbjct: 438 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 496
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSI---KGTPLYMAPELVREQPYNHTADL 185
+N+L+ K+ DFG ++A+ A+ ++ K + APE + ++ +D+
Sbjct: 497 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 556
Query: 186 WSLGVILYELF-VGQPPF 202
WS GV+++E F GQ P+
Sbjct: 557 WSFGVLMWEAFSYGQKPY 574
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 107
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 108 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 165
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL---YMAP 171
YL S + +HRD+ +N ++ VK+ DFG AR M + + G L +MA
Sbjct: 166 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 285
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 80
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 81 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 138
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL---YMAP 171
YL S + +HRD+ +N ++ VK+ DFG AR M + + G L +MA
Sbjct: 139 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 258
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 88
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 89 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL---YMAP 171
YL S + +HRD+ +N ++ VK+ DFG AR M + + G L +MA
Sbjct: 147 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 147
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 148 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 205
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPL-YMAP 171
+L S + +HRD+ +N ++ VK+ DFG AR M ++V ++ P+ +MA
Sbjct: 206 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 325
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 110 QLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSAN---TVVLRSIK--- 163
Q+ A+ +LHS ++HRD+KP NI VVK+ DFG AM + VL +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 164 ------GTPLYMAPELVREQPYNHTADLWSLGVILYEL 195
GT LYM+PE + Y+H D++SLG+IL+EL
Sbjct: 232 THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQN 64
++ I+ +G G FG V++ + K A+K I + E + +E++ L KL+H
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKLEHPG 65
Query: 65 IIEMLDSF-ESPQE 77
I+ +++ E+P E
Sbjct: 66 IVRYFNAWLETPPE 79
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 85
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 86 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 143
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL---YMAP 171
YL S + +HRD+ +N ++ VK+ DFG AR M + + G L +MA
Sbjct: 144 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 263
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 30/249 (12%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 88
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 89 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL---YMAP 171
YL S + +HRD+ +N ++ VK+ DFG AR M + + G L +MA
Sbjct: 147 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD-- 264
Query: 226 SPNFKSFLK 234
P ++ LK
Sbjct: 265 -PLYEVMLK 272
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 83
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 84 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 141
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL---YMAP 171
YL S + +HRD+ +N ++ VK+ DFG AR M + + G L +MA
Sbjct: 142 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 261
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 86
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 87 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 144
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL---YMAP 171
YL S + +HRD+ +N ++ VK+ DFG AR M + + G L +MA
Sbjct: 145 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 264
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKG--RRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILR 58
E ++ +G+GSFG VY+G R G+ VA+K + + + I L E +++
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMK 76
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQSI--- 107
+++ +L Q VV E A G+L L E++ P +Q +
Sbjct: 77 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 136
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TP 166
A ++ + YL++ + +HR++ +N ++ VK+ DFG R + + KG P
Sbjct: 137 AAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYEL 195
+ +MAPE +++ + ++D+WS GV+L+E+
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 87
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 88 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 145
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM-SANTVVLRSIKGTPL---YMAP 171
YL S + +HRD+ +N ++ VK+ DFG AR M + + G L +MA
Sbjct: 146 KYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 265
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 4 ENYHVIELVGEGSFGKVYKG--RRKYTGQT---VAMKFIMKHGKSEKDIHNLRQEIEILR 58
E ++ +G+GSFG VY+G R G+ VA+K + + + I L E +++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMK 75
Query: 59 KLKHQNIIEMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQSI--- 107
+++ +L Q VV E A G+L L E++ P +Q +
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 108 AKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TP 166
A ++ + YL++ + +HR++ +N ++ VK+ DFG R + + KG P
Sbjct: 136 AAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 167 L-YMAPELVREQPYNHTADLWSLGVILYEL 195
+ +MAPE +++ + ++D+WS GV+L+E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + ++ G L + + + K + + + + Q+ + ++YL
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 88
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 89 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPL-YMAP 171
+L S + +HRD+ +N ++ VK+ DFG AR M ++V ++ P+ +MA
Sbjct: 147 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 89
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 90 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 147
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPL-YMAP 171
+L S + +HRD+ +N ++ VK+ DFG AR M ++V ++ P+ +MA
Sbjct: 148 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 267
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 88
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 89 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPL-YMAP 171
+L S + +HRD+ +N ++ VK+ DFG AR M ++V ++ P+ +MA
Sbjct: 147 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 86
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 87 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 144
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPL-YMAP 171
+L S + +HRD+ +N ++ VK+ DFG AR M ++V ++ P+ +MA
Sbjct: 145 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 264
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 93
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 94 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 151
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPL-YMAP 171
+L S + +HRD+ +N ++ VK+ DFG AR M ++V ++ P+ +MA
Sbjct: 152 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 271
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 7 HVIELVGEGSFGKVYKGR------RKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKL 60
H E++G G FG VY G +K ++ I G ++ E I++
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG----EVSQFLTEGIIMKDF 89
Query: 61 KHQNIIEMLD----SFESPQEFCVVTEFAQGELFEILEDDKCLPE-EQVQSIAKQLVRAL 115
H N++ +L S SP V+ G+L + ++ P + + Q+ + +
Sbjct: 90 SHPNVLSLLGICLRSEGSP--LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 147
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM---SANTVVLRSIKGTPL-YMAP 171
+L S + +HRD+ +N ++ VK+ DFG AR M ++V ++ P+ +MA
Sbjct: 148 KFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 172 ELVREQPYNHTADLWSLGVILYELFV-GQPPF-----YTNSVYALIRHIVKDPVKYPDEM 225
E ++ Q + +D+WS GV+L+EL G PP+ + +VY L + P PD +
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 267
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + ++ G L + + + K + + + + Q+ + ++YL
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + ++ G L + + + K + + + + Q+ + ++YL
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 30/270 (11%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIM---KHGKSE--KDIHNLRQEIEILRKLKHQNII 66
+G+G FG V+KGR VA+K ++ G++E + ++E+ I+ L H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQ-SIAKQLVRALHYLHSNR-- 122
++ +P +V EF G+L+ L D + V+ + + + Y+ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 123 IIHRDMKPQNILI-----GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV--R 175
I+HRD++ NI + A K+ DFG ++ S ++V + G +MAPE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-QSVHSV--SGLLGNFQWMAPETIGAE 201
Query: 176 EQPYNHTADLWSLGVILYELFVGQPPF--YTNSVYALIRHIVKDPVK--YPDEMSPNFKS 231
E+ Y AD +S +ILY + G+ PF Y+ I I ++ ++ P++ P ++
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN 261
Query: 232 FLKGLLNKVPQNRLTWSALLEHPFVKETSD 261
++ + P+ R +S + VKE S+
Sbjct: 262 VIELCWSGDPKKRPHFSYI-----VKELSE 286
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + ++ G L + + + K + + + + Q+ + ++YL
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 202 YTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + ++ G L + + + K + + + + Q+ + ++YL
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPY 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + ++ G L + + + K + + + + Q+ + ++YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 117/253 (46%), Gaps = 11/253 (4%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
E ++E +G G G+V+ G Y G T +K G D E ++++L+HQ
Sbjct: 13 ETLKLVERLGAGQAGEVWMG--YYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQ 68
Query: 64 NIIEMLDSFESPQEFCVVTEFAQ-GELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHS 120
++ + + + + ++TE+ + G L + L+ L ++ +A Q+ + ++
Sbjct: 69 RLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPL-YMAPELVREQPY 179
IHRD++ NIL+ K+ DFG AR + R P+ + APE + +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 180 NHTADLWSLGVILYELFV-GQPPFYTNSVYALIRHIVKD-PVKYPDEMSPNFKSFLKGLL 237
+D+WS G++L E+ G+ P+ + +I+++ + + PD ++
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 247
Query: 238 NKVPQNRLTWSAL 250
+ P++R T+ L
Sbjct: 248 KERPEDRPTFDYL 260
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-----VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+G+GSFG VY+G K + VA+K + + + I L E ++++ +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNCHHVV 85
Query: 67 EMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQ---SIAKQLVRAL 115
+L Q V+ E +G+L L E++ L + +A ++ +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPEL 173
YL++N+ +HRD+ +N ++ VK+ DFG R + + KG P+ +M+PE
Sbjct: 146 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPES 205
Query: 174 VREQPYNHTADLWSLGVILYEL-FVGQPPFYTNSVYALIRHIVK 216
+++ + +D+WS GV+L+E+ + + P+ S ++R +++
Sbjct: 206 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-----VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+G+GSFG VY+G K + VA+K + + + I L E ++++ +++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNCHHVV 76
Query: 67 EMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQ---SIAKQLVRAL 115
+L Q V+ E +G+L L E++ L + +A ++ +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPEL 173
YL++N+ +HRD+ +N ++ VK+ DFG R + + KG P+ +M+PE
Sbjct: 137 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPES 196
Query: 174 VREQPYNHTADLWSLGVILYEL-FVGQPPFYTNSVYALIRHIVK 216
+++ + +D+WS GV+L+E+ + + P+ S ++R +++
Sbjct: 197 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 240
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 221 YTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNIIEMLDS 71
+G G FG+V+ Y T MK G + E +++ L+H +++ L +
Sbjct: 190 LGAGQFGEVWMA--TYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVK-LHA 244
Query: 72 FESPQEFCVVTEF-AQGELFEILEDDKC--LPEEQVQSIAKQLVRALHYLHSNRIIHRDM 128
+ + ++TEF A+G L + L+ D+ P ++ + Q+ + ++ IHRD+
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 129 KPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWSL 188
+ NIL+ A V K+ DFG AR + + + APE + + +D+WS
Sbjct: 305 RAANILVSASLVCKIADFGLARVGAKFPIK---------WTAPEAINFGSFTIKSDVWSF 355
Query: 189 GVILYELFV-GQPPFYTNSVYALIR 212
G++L E+ G+ P+ S +IR
Sbjct: 356 GILLMEIVTYGRIPYPGMSNPEVIR 380
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 9 IELVGEGSFGKVYKGRRKYTGQTVAMKF---IMKHGKSEKDIHNLRQEIEILRKLKHQNI 65
++++G G+FG VYKG G+ V + +++ S K + E ++ + +
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 66 IEMLDSFESPQEFCVVTEFAQGELFE-ILEDDKCLPEEQVQSIAKQLVRALHYLHSNRII 124
+L + V G L + + E+ L + + + Q+ + + YL R++
Sbjct: 82 SRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLV 141
Query: 125 HRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQPYNHT 182
HRD+ +N+L+ + + VK+ DFG AR + + + G P+ +MA E + + + H
Sbjct: 142 HRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQ 201
Query: 183 ADLWSLGVILYELFV-GQPPF 202
+D+WS GV ++EL G P+
Sbjct: 202 SDVWSYGVTVWELMTFGAKPY 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ + ++YL
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 206 YTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 30/270 (11%)
Query: 12 VGEGSFGKVYKGRRKYTGQTVAMKFIM---KHGKSE--KDIHNLRQEIEILRKLKHQNII 66
+G+G FG V+KGR VA+K ++ G++E + ++E+ I+ L H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 67 EMLDSFESPQEFCVVTEFAQ-GELFEILEDDKCLPEEQVQ-SIAKQLVRALHYLHSNR-- 122
++ +P +V EF G+L+ L D + V+ + + + Y+ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 123 IIHRDMKPQNILI-----GAGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELV--R 175
I+HRD++ NI + A K+ DFG ++ S ++V + G +MAPE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-QSVHSV--SGLLGNFQWMAPETIGAE 201
Query: 176 EQPYNHTADLWSLGVILYELFVGQPPF--YTNSVYALIRHIVKDPVK--YPDEMSPNFKS 231
E+ Y AD +S +ILY + G+ PF Y+ I I ++ ++ P++ P ++
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN 261
Query: 232 FLKGLLNKVPQNRLTWSALLEHPFVKETSD 261
++ + P+ R +S + VKE S+
Sbjct: 262 VIELCWSGDPKKRPHFSYI-----VKELSE 286
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 32/262 (12%)
Query: 4 ENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQ 63
++Y I+ +GEG F V + G A+K I+ H ++D ++E ++ R H
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHP 86
Query: 64 NIIEML-----DSFESPQEFCVVTEFAQGELFEILE--DDK--CLPEEQVQSIAKQLVRA 114
NI+ ++ + + + ++ F +G L+ +E DK L E+Q+ + + R
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 115 LHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAM------SANTVVLRSI---KGT 165
L +H+ HRD+KP NIL+G L D G S + L+ + T
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 166 PLYMAPELVREQPY---NHTADLWSLGVILYELFVGQPP----FYTNSVYALIRHIVKDP 218
Y APEL Q + + D+WSLG +LY + G+ P F AL V++
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL---AVQNQ 263
Query: 219 VKYPDEMSPNFKSFLKGLLNKV 240
+ P SP S L LLN +
Sbjct: 264 LSIPQ--SPRHSSALWQLLNSM 283
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + + G L + + + K + + + + Q+ ++YL
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 133 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-----VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+G+GSFG VY+G K + VA+K + + + I L E ++++ +++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNCHHVV 82
Query: 67 EMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQ---SIAKQLVRAL 115
+L Q V+ E +G+L L E++ L + +A ++ +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPEL 173
YL++N+ +HRD+ +N ++ VK+ DFG R + + KG P+ +M+PE
Sbjct: 143 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 202
Query: 174 VREQPYNHTADLWSLGVILYEL-FVGQPPFYTNSVYALIRHIVK 216
+++ + +D+WS GV+L+E+ + + P+ S ++R +++
Sbjct: 203 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 246
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-----VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+G+GSFG VY+G K + VA+K + + + I L E ++++ +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNCHHVV 84
Query: 67 EMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQ---SIAKQLVRAL 115
+L Q V+ E +G+L L E++ L + +A ++ +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPEL 173
YL++N+ +HRD+ +N ++ VK+ DFG R + + KG P+ +M+PE
Sbjct: 145 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 204
Query: 174 VREQPYNHTADLWSLGVILYEL-FVGQPPFYTNSVYALIRHIVK 216
+++ + +D+WS GV+L+E+ + + P+ S ++R +++
Sbjct: 205 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + ++ G L + + + K + + + + Q+ + ++YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 5 NYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKH---GKSEKDIHNLRQEIEILRKLK 61
+ I+++G G+FG VYKG G+ V + +K S K + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 62 HQNIIEMLDSFESPQEFCVVTEFAQGELFEILEDDK-CLPEEQVQSIAKQLVRALHYLHS 120
+ ++ +L + ++ G L + + + K + + + + Q+ + ++YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 121 NRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPELVREQP 178
R++HRD+ +N+L+ VK+ DFG A+ + A + G P+ +MA E + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 179 YNHTADLWSLGVILYELFV-GQPPF 202
Y H +D+WS GV ++EL G P+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 12 VGEGSFGKVYKGRRKYTGQT-----VAMKFIMKHGKSEKDIHNLRQEIEILRKLKHQNII 66
+G+GSFG VY+G K + VA+K + + + I L E ++++ +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNCHHVV 85
Query: 67 EMLDSFESPQEFCVVTEF-AQGELFEIL-------EDDKCLPEEQVQ---SIAKQLVRAL 115
+L Q V+ E +G+L L E++ L + +A ++ +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 116 HYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSANTVVLRSIKG-TPL-YMAPEL 173
YL++N+ +HRD+ +N ++ VK+ DFG R + + KG P+ +M+PE
Sbjct: 146 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 205
Query: 174 VREQPYNHTADLWSLGVILYEL-FVGQPPFYTNSVYALIRHIVK 216
+++ + +D+WS GV+L+E+ + + P+ S ++R +++
Sbjct: 206 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,350,775
Number of Sequences: 62578
Number of extensions: 1251210
Number of successful extensions: 6737
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 2796
Number of HSP's gapped (non-prelim): 1325
length of query: 1214
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1104
effective length of database: 8,089,757
effective search space: 8931091728
effective search space used: 8931091728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)