BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 000944
         (1213 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|449459948|ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
 gi|449513493|ref|XP_004164340.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
          Length = 1214

 Score = 2313 bits (5993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1101/1214 (90%), Positives = 1172/1214 (96%), Gaps = 1/1214 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLYSLTLQ+ TGI++AINGNFSG KT EIVVARGKVL+L+RP++SG+I+TL+S EIFGA
Sbjct: 1    MYLYSLTLQRATGIVSAINGNFSGGKTQEIVVARGKVLDLIRPDDSGKIQTLLSVEIFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN  KNVFDKIHQETFGKSGCRRIVPGQYL
Sbjct: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKDKNVFDKIHQETFGKSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A+DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI
Sbjct: 121  AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQDSTG AASEAQK+LTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG
Sbjct: 181  FAAIELDYSEADQDSTGVAASEAQKHLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAA H+QKT+FFFLLQ
Sbjct: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAMHKQKTMFFFLLQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            TEYGDIFKVTLEH+N+ V ELKIKYFDTIPVTASMCVLKSG+LFAASEFGNH+LYQFQAI
Sbjct: 301  TEYGDIFKVTLEHNNDSVKELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHSLYQFQAI 360

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G D DVE+SS+TLMETEEGFQPVFFQPR LKNL+RI+QVESLMPIMDM+I NLFEEE PQ
Sbjct: 361  GEDADVESSSATLMETEEGFQPVFFQPRRLKNLMRIDQVESLMPIMDMKIINLFEEETPQ 420

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            IFTLCGRGPRSSLRILRPGLA+SEMAVS+LPGVPSAVWTVKKN+NDEFDAYIVVSF NAT
Sbjct: 421  IFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNINDEFDAYIVVSFANAT 480

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP+GIRHIREDGRINEWRTPGKR
Sbjct: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR 540

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
            TIVKVGSNRLQVVIALSGGELIYFEVDMTGQL+EVEKHEMSGDVACLDIA VPEGR+RSR
Sbjct: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR 600

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            FLAVGSYDNTIRILSLDPDDCMQILSVQSVS+ PESLLFLEV ASVGGEDGADHPASLFL
Sbjct: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSAAPESLLFLEVLASVGGEDGADHPASLFL 660

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
            NA L +GVLFRTVVDMVTGQLSDSRSRFLGLR PKLFSVV+ GR A+LCLSSRPWLGYIH
Sbjct: 661  NAALHSGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVVLRGRRAILCLSSRPWLGYIH 720

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
            +G FLLTPLSYETLEYA+SFSSDQC EGVV+VAGN LRVFTIERLGETFNET +PLRYTP
Sbjct: 721  QGHFLLTPLSYETLEYASSFSSDQCAEGVVAVAGNFLRVFTIERLGETFNETVIPLRYTP 780

Query: 781  RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN-GDDENK 839
            R+FVLQP++KL+V+IE+DQGA TAEEREAAKKECFEAAG GENGNG MDQMEN GDDE+K
Sbjct: 781  RKFVLQPRRKLLVVIESDQGAFTAEEREAAKKECFEAAGAGENGNGTMDQMENGGDDEDK 840

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGT 899
             DPLSDE YGYPKAES+KWVSCIRVLDPRSA TTCLLELQDNEAAFS+CTVNFHDKE+GT
Sbjct: 841  DDPLSDEHYGYPKAESEKWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKEYGT 900

Query: 900  LLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAG 959
            LLAVGTAKGLQF+PKR++VAGYIHIYRF+E+GKSLELLHKTQVEG+PLAL QFQGRLLAG
Sbjct: 901  LLAVGTAKGLQFFPKRSLVAGYIHIYRFLEDGKSLELLHKTQVEGVPLALAQFQGRLLAG 960

Query: 960  IGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLY 1019
            +G VLRLYDLGK+RLLRKCENKLFPNTIVSI TYRDRIYVGDIQESFH+CKYRRDENQLY
Sbjct: 961  LGSVLRLYDLGKRRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLY 1020

Query: 1020 IFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1079
            IFADDSVPRWLTA++H+DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL
Sbjct: 1021 IFADDSVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1080

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS 1139
            NGAPNK+EEI+QFH+GDVVTSLQKASL+PGGGE ++YGTVMGSLGA+ AF+SRDDVDFFS
Sbjct: 1081 NGAPNKVEEIIQFHIGDVVTSLQKASLIPGGGECILYGTVMGSLGALHAFTSRDDVDFFS 1140

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
            HLEMHMRQEHPPLCGRDHM YRSAYFPVKDVIDGDLCEQFP+L LD+QRKIADELDRTPG
Sbjct: 1141 HLEMHMRQEHPPLCGRDHMGYRSAYFPVKDVIDGDLCEQFPSLPLDMQRKIADELDRTPG 1200

Query: 1200 EILKKLEEIRNKIV 1213
            EILKKLEE+RNKI+
Sbjct: 1201 EILKKLEEVRNKII 1214


>gi|225448823|ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score = 2311 bits (5990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1111/1214 (91%), Positives = 1177/1214 (96%), Gaps = 1/1214 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLYSLTLQQ TGI+ AINGNFSG K+ EIVVARGKVL+LLRP+ +G+I+T++S EIFGA
Sbjct: 1    MYLYSLTLQQATGIVCAINGNFSGGKSQEIVVARGKVLDLLRPDENGKIQTILSVEIFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN  KNVFDKIHQETFGKSGCRRIVPGQYL
Sbjct: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A+DPKGRAVMIGACEKQKLVYVLNRDT ARLTISSPLEAHKSHTIVYSI G+DCGFDNPI
Sbjct: 121  AIDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTIVYSITGVDCGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQDSTGQAASEAQK+LTFYELDLGLNHVSRKWSE VDNGANMLVTVPGG
Sbjct: 181  FAAIELDYSEADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQK++FFFLLQ
Sbjct: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKSMFFFLLQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            TEYGD+FKVTLEH+N+ +SELKIKYFDTIPVT+SMCVLKSG+LFAASEFGNH LYQFQAI
Sbjct: 301  TEYGDVFKVTLEHENDRISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHGLYQFQAI 360

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G D DVE+SS++LMETEEGFQPVFFQPRGLKNLVRI+QVESLMPIMDM+++NLFEEE PQ
Sbjct: 361  GDDADVESSSASLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVSNLFEEETPQ 420

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            IF LCGRGPRSS+RILRPGLA+SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF NAT
Sbjct: 421  IFALCGRGPRSSIRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANAT 480

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR
Sbjct: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
            TIVKVGSNRLQVVIALSGGELIYFEVDMTGQL+EVEKHEMSGDVACLDIA VPEGR+RSR
Sbjct: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR 600

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL
Sbjct: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
            NAGLQNGVLFRTVVDMVTGQLSD+RSRFLGLR PKLFSV+V GR AMLCLSSRPWLGYIH
Sbjct: 661  NAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIVRGRRAMLCLSSRPWLGYIH 720

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
            +G FLLTPLSYETLE+AASFSSDQC EGVV+VAG+ALRVFTIERLGETFNET +PLRYTP
Sbjct: 721  QGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETVIPLRYTP 780

Query: 781  RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN-GDDENK 839
            R+FVLQPK+KL+V+IE+DQGA  AEEREAAKKECFEAAGMGENGNGN++QMEN GDDE+K
Sbjct: 781  RKFVLQPKRKLLVVIESDQGAFAAEEREAAKKECFEAAGMGENGNGNVEQMENGGDDEDK 840

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGT 899
             DPLSDEQYGYPKAESDKWVSCIR+LDPR+A TTCLLELQDNEAAFSICTVNFHDKE+GT
Sbjct: 841  DDPLSDEQYGYPKAESDKWVSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGT 900

Query: 900  LLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAG 959
            LLAVGTAK LQFWPKR+  AGYIHIYRF+E+GKSLELLHKTQVEG+PLALCQFQGRLLAG
Sbjct: 901  LLAVGTAKSLQFWPKRSFDAGYIHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAG 960

Query: 960  IGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLY 1019
            IG VLRLYDLGK+RLLRKCENKLFPNTIVSI+TYRDRIYVGDIQESFH+CKYRRDENQLY
Sbjct: 961  IGSVLRLYDLGKRRLLRKCENKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLY 1020

Query: 1020 IFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1079
            IFADDSVPRWLTA++HIDFDTMAGADKFGNIYFVRLPQDVSDE+EEDPTGGKIKWEQGKL
Sbjct: 1021 IFADDSVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKL 1080

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS 1139
            NGAPNK+EEIVQFHVGDVVT LQKASL+PGGGE +IYGTVMGSLGA+LAF+SRDDVDFFS
Sbjct: 1081 NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIIYGTVMGSLGALLAFTSRDDVDFFS 1140

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
            HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL LDLQRKIADELDRTPG
Sbjct: 1141 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPG 1200

Query: 1200 EILKKLEEIRNKIV 1213
            EILKKLEE+RNKI+
Sbjct: 1201 EILKKLEEVRNKII 1214


>gi|255588145|ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
 gi|223525135|gb|EEF27867.1| spliceosomal protein sap, putative [Ricinus communis]
          Length = 1214

 Score = 2308 bits (5980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1094/1214 (90%), Positives = 1175/1214 (96%), Gaps = 1/1214 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRP-ENSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TGII AINGNFSG KT EIVVARGKVL+LLRP ENSG+++T++S EIFG
Sbjct: 1    MYLYNLTLQRATGIITAINGNFSGGKTQEIVVARGKVLDLLRPDENSGKLQTILSVEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN  +NVFDKIHQETFGKSGCRRIVPGQY
Sbjct: 61   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNVFDKIHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICG+DCGFDNP
Sbjct: 121  LAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGVDCGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAAIELDYSEAD DSTGQAA+EAQK LTFYELDLGLNHVSRKWSE VDNGANMLVTVPG
Sbjct: 181  IFAAIELDYSEADLDSTGQAANEAQKVLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
            GGDGPSGVLVCAENFVIYKN+GHPDVRAVIPRRADLPAERGVLIVSAATHRQK++FFFLL
Sbjct: 241  GGDGPSGVLVCAENFVIYKNEGHPDVRAVIPRRADLPAERGVLIVSAATHRQKSMFFFLL 300

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            QTEYGDIFKVTL+H+N+ V ELKIKYFDTIPVT+SMCV+K G+LFAASEFGNHALYQFQA
Sbjct: 301  QTEYGDIFKVTLDHENDKVKELKIKYFDTIPVTSSMCVMKLGFLFAASEFGNHALYQFQA 360

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            IG + DVEASS+TLMETEEGFQPVFFQPRGLKNLVRI+QVESLMPIMDM+IANLF+EE P
Sbjct: 361  IGEEADVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKIANLFDEETP 420

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QIF+LCGRGPRSSLRILRPGLA+SEMAVSQLPGVPSAVWTVKKNVNDEFDAYI+VSFNNA
Sbjct: 421  QIFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIIVSFNNA 480

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
            TLVLSIGETVEEV++SGFLDTTPSLAVSLIGDDSLMQVHP+GIRHIREDGRINEWRTPGK
Sbjct: 481  TLVLSIGETVEEVNNSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGK 540

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            RTIVKVGSNR+QVVIALSGGELIYFEVD+TGQL+EVEKHEMSGDVACLDIA VPEGR+RS
Sbjct: 541  RTIVKVGSNRVQVVIALSGGELIYFEVDITGQLMEVEKHEMSGDVACLDIAPVPEGRQRS 600

Query: 600  RFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
            RFLAVGS+DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG ED ADHPASLF
Sbjct: 601  RFLAVGSFDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGREDVADHPASLF 660

Query: 660  LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYI 719
            LNAGLQ+GVLFRT+VDMVTGQLSDSRSRFLGLR PKLFS++V GR AMLCLSSRPWLGYI
Sbjct: 661  LNAGLQSGVLFRTLVDMVTGQLSDSRSRFLGLRAPKLFSILVRGRRAMLCLSSRPWLGYI 720

Query: 720  HRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYT 779
            H+G FLLTPLSYETLE+AASFSSDQC EGVV+VAG+ALR+FTIERLGETFNETA+PLRYT
Sbjct: 721  HQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRIFTIERLGETFNETAIPLRYT 780

Query: 780  PRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENK 839
            PR+FVLQPKKKL+VI+E+DQGA TAEEREAAKKECFEAAGMGENG+ N +QMENGDDE+K
Sbjct: 781  PRKFVLQPKKKLLVIVESDQGAYTAEEREAAKKECFEAAGMGENGSANAEQMENGDDEDK 840

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGT 899
             DPLSDEQYGYPKAE++KWVSCIRVLDPR+A TTCLLELQDNEAAFS+CTVNFHDKEHGT
Sbjct: 841  DDPLSDEQYGYPKAEAEKWVSCIRVLDPRTAATTCLLELQDNEAAFSVCTVNFHDKEHGT 900

Query: 900  LLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAG 959
            LLAVGTAKGLQFWPKR++ AG+IHIY+FV++G++LELLHKTQVEG+PLAL QFQGRLLAG
Sbjct: 901  LLAVGTAKGLQFWPKRSLSAGFIHIYKFVDDGRALELLHKTQVEGVPLALSQFQGRLLAG 960

Query: 960  IGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLY 1019
            IGPVLRLYDLGKKRLLRKCENKLFPN+IVSI TYRDRIYVGDIQESFHFCKYRRDENQLY
Sbjct: 961  IGPVLRLYDLGKKRLLRKCENKLFPNSIVSIQTYRDRIYVGDIQESFHFCKYRRDENQLY 1020

Query: 1020 IFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1079
            IFADD VPRWLTA+HH+DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL
Sbjct: 1021 IFADDCVPRWLTASHHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1080

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS 1139
            NGAPNK+EEIVQFH+GDVVTSL KASL+PGGGE +IYGTVMGS+GA+L F+SRDDVDFFS
Sbjct: 1081 NGAPNKVEEIVQFHIGDVVTSLSKASLIPGGGECIIYGTVMGSVGALLPFTSRDDVDFFS 1140

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
            HLEMH+RQ+HPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL LD QRKIADELDRTPG
Sbjct: 1141 HLEMHLRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPLDAQRKIADELDRTPG 1200

Query: 1200 EILKKLEEIRNKIV 1213
            EILKKLEE+RNKI+
Sbjct: 1201 EILKKLEEVRNKII 1214


>gi|224100909|ref|XP_002312063.1| predicted protein [Populus trichocarpa]
 gi|222851883|gb|EEE89430.1| predicted protein [Populus trichocarpa]
          Length = 1213

 Score = 2307 bits (5978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1089/1213 (89%), Positives = 1176/1213 (96%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLYSLTLQ+ TGI++AINGNFSG K  EIVVARGKVL+LLRP+ +G+++T++S EIFGA
Sbjct: 1    MYLYSLTLQRATGIVSAINGNFSGGKAQEIVVARGKVLDLLRPDENGKLQTVLSVEIFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLAQFRLTG+QKDYIVVGSDSGRIVILEYN  +NVFDKIHQETFGKSGCRRIVPGQYL
Sbjct: 61   IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKERNVFDKIHQETFGKSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRAVMIGACEKQKLVYVLNRDT ARLTISSPLEAHKSHTI YS+CG+DCGFDNPI
Sbjct: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTICYSVCGVDCGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQDSTGQAA EAQKNLTFYELDLGLNHVSRKWSE VDNGANMLVTVPGG
Sbjct: 181  FAAIELDYSEADQDSTGQAAGEAQKNLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGPSG+LVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH+QK++FFFLLQ
Sbjct: 241  GDGPSGILVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFFLLQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            TEYGDIFKVTL+H+N+ V ELKIKYFDTIPVT+S+CVLKSG+LFAASEFGNHALYQFQAI
Sbjct: 301  TEYGDIFKVTLDHENDKVKELKIKYFDTIPVTSSICVLKSGFLFAASEFGNHALYQFQAI 360

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G + DVEASS+TLMETEEGFQPVFFQPRGLKNLVRI+QVESLMP+MDM++AN+F+EE PQ
Sbjct: 361  GEEEDVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPVMDMKVANIFDEETPQ 420

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            IF+LCGRGPRSSLRILRPGLA+SEMAVSQLPGVPSAVWTVK+N NDEFDAYIVVSFNNAT
Sbjct: 421  IFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKRNANDEFDAYIVVSFNNAT 480

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQ+HP+GIRHIREDGRINEWRTPGKR
Sbjct: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQIHPNGIRHIREDGRINEWRTPGKR 540

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
            TIVKVGSNRLQVVIALSGGELIYFEVDMTGQL+EVEKHEMSGDVACLDIA VPEGR+RSR
Sbjct: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR 600

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            FLAVGSYDNTIR+LSLDPDDCMQILSVQSVS+PPESLLFLEVQAS+GGEDGADHPASLFL
Sbjct: 601  FLAVGSYDNTIRVLSLDPDDCMQILSVQSVSAPPESLLFLEVQASIGGEDGADHPASLFL 660

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
            NAGLQ GVLFRTVVDMVTGQLSDSRSRFLGLR PKLF++ V GR AMLCLSSRPWLGYIH
Sbjct: 661  NAGLQTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFAINVRGRRAMLCLSSRPWLGYIH 720

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
            +G FLLTPLSYETLEYAASFSSDQC EGVV+VAG+ALR+FTIERLGETFNETA+PLRYTP
Sbjct: 721  QGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRIFTIERLGETFNETAIPLRYTP 780

Query: 781  RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKY 840
            R+FVLQPK+KL+VIIE+DQGA TAEEREAAKKECFEAAGMGENG+ N ++MENGDD++K 
Sbjct: 781  RKFVLQPKRKLLVIIESDQGAYTAEEREAAKKECFEAAGMGENGSANAEKMENGDDDDKD 840

Query: 841  DPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTL 900
            DPLSDEQYGYPKAE+D+WVSCIRVLDPRSA TTCLLELQDNEAAFS+CTVNFHDKEHGTL
Sbjct: 841  DPLSDEQYGYPKAEADRWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKEHGTL 900

Query: 901  LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGI 960
            LAVGTAKGLQFWPKR+++AG+IHIY+FV++GKSLELLHKTQVEG+PLALCQFQGRLLAGI
Sbjct: 901  LAVGTAKGLQFWPKRSLIAGFIHIYKFVDDGKSLELLHKTQVEGVPLALCQFQGRLLAGI 960

Query: 961  GPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYI 1020
            G VLRLYDLGKKRLLRKCENKLFPN+IVSI+TYRDRIYVGDIQESFHFCKYRRDENQLYI
Sbjct: 961  GSVLRLYDLGKKRLLRKCENKLFPNSIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLYI 1020

Query: 1021 FADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN 1080
            FADDSVPRWLTA++H+DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN
Sbjct: 1021 FADDSVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN 1080

Query: 1081 GAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSH 1140
            GAPNK+EEIVQFH+GDVV SLQKASL+PGGGE ++YGTVMGS+GA+L F+SRDDVDFFSH
Sbjct: 1081 GAPNKVEEIVQFHIGDVVNSLQKASLIPGGGECIMYGTVMGSVGALLPFTSRDDVDFFSH 1140

Query: 1141 LEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGE 1200
            LEMH+RQ+HPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL LD QRKIADELDRTPGE
Sbjct: 1141 LEMHLRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPLDAQRKIADELDRTPGE 1200

Query: 1201 ILKKLEEIRNKIV 1213
            ILKKLEE+RNKI+
Sbjct: 1201 ILKKLEEVRNKII 1213


>gi|224109600|ref|XP_002315251.1| predicted protein [Populus trichocarpa]
 gi|222864291|gb|EEF01422.1| predicted protein [Populus trichocarpa]
          Length = 1213

 Score = 2300 bits (5959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1091/1213 (89%), Positives = 1171/1213 (96%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLYSLTLQ+ TGII+AINGNFSG K  EIVVARGKVL+LLRP+ +G+++T++S EIFGA
Sbjct: 1    MYLYSLTLQRATGIISAINGNFSGGKAQEIVVARGKVLDLLRPDENGKLQTVLSVEIFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLAQFRLTG+QKDYIVVGSDSGRIVILEYN  +NV DKIHQETFGKSGCRRIVPGQYL
Sbjct: 61   IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKERNVLDKIHQETFGKSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRAVMIGACEKQKLVYVLNRDT ARLTISSPLEAHKSHTI YS+CG+DCGFDNPI
Sbjct: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTICYSVCGVDCGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQDSTGQ+ASEAQKNLTFYELDLGLNHVSRKWSE VDNGANMLVTVPGG
Sbjct: 181  FAAIELDYSEADQDSTGQSASEAQKNLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGPSGVLVC ENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH+QK++FFFLLQ
Sbjct: 241  GDGPSGVLVCVENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFFLLQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            TEYGDIFKV L+H+N+ V ELKIKYFDTIPVT+SMCVLKSG+LFAASEFGNHALYQFQAI
Sbjct: 301  TEYGDIFKVMLDHENDKVKELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHALYQFQAI 360

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G + DVEASS+TLMETEEGFQPVFFQPRGLKNLVRI+QVESLMPIMDM++ANLF+EE PQ
Sbjct: 361  GEEEDVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVANLFDEETPQ 420

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            IF+LCGRGPRSSLRILRPGLA+SEMAVSQLPGVPSAVWTVKKN+ DEFDAYIVVSFNNAT
Sbjct: 421  IFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNIYDEFDAYIVVSFNNAT 480

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQ+HP+GIRHIREDGRINEWRTP KR
Sbjct: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQIHPNGIRHIREDGRINEWRTPAKR 540

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
            TIVKVGSNRLQVVIALSGGELIYFEVDMTGQL+EVEKHEMSGDVACLDIA VPEGR+RSR
Sbjct: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR 600

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            FLAVGSYDNTIR+LSLDPDDCMQILSVQSVS+PPESLLFLEVQAS+GGEDGADHPASLFL
Sbjct: 601  FLAVGSYDNTIRVLSLDPDDCMQILSVQSVSAPPESLLFLEVQASIGGEDGADHPASLFL 660

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
            NAGLQ GVLFRTVVDMVTGQLSDSRSRFLGLR PKLFS+ V GR AMLCLSSRPWLGYIH
Sbjct: 661  NAGLQTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSINVRGRRAMLCLSSRPWLGYIH 720

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
            +G FLLTPLSYETLEYAASFSSDQC EGVVSVAG+ALR+FTIERLGETFNETA+PLRYTP
Sbjct: 721  QGHFLLTPLSYETLEYAASFSSDQCAEGVVSVAGDALRIFTIERLGETFNETAIPLRYTP 780

Query: 781  RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKY 840
            R+FVLQPK+KL+VIIE+DQGA TAEEREAAKKECFEA+GMGENG+ + +QMENGDD++K 
Sbjct: 781  RKFVLQPKRKLLVIIESDQGAYTAEEREAAKKECFEASGMGENGSASAEQMENGDDDDKD 840

Query: 841  DPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTL 900
            DPLSDEQYGYPKAESDKWVSCIRVLDPRSA TTCLLELQDNEAAFS+CTVNFHDKEHGTL
Sbjct: 841  DPLSDEQYGYPKAESDKWVSCIRVLDPRSAATTCLLELQDNEAAFSLCTVNFHDKEHGTL 900

Query: 901  LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGI 960
            LAVGTAKGLQFWPKR++V G+IHIY+FV++GKSLELLHKTQVEG+PLALCQFQGRLLAGI
Sbjct: 901  LAVGTAKGLQFWPKRSLVTGFIHIYKFVDDGKSLELLHKTQVEGVPLALCQFQGRLLAGI 960

Query: 961  GPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYI 1020
            G VLRLYDLGKKRLLRKCENKLFPNTIVSI+TYRDRIYVGDIQESFHFCKYRRDENQLYI
Sbjct: 961  GSVLRLYDLGKKRLLRKCENKLFPNTIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLYI 1020

Query: 1021 FADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN 1080
            FADDSVPRWLT+++H+DFD+MAGADKFGNIYF RLPQDVSDEIEEDPTGGKIKWEQGKLN
Sbjct: 1021 FADDSVPRWLTSSYHVDFDSMAGADKFGNIYFARLPQDVSDEIEEDPTGGKIKWEQGKLN 1080

Query: 1081 GAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSH 1140
            GAPNK+EEIVQFH+GDVV SLQKASL+PGGGE +IYGTVMGS+GA+L F+SRDDVDFFSH
Sbjct: 1081 GAPNKVEEIVQFHIGDVVNSLQKASLIPGGGECIIYGTVMGSVGALLPFTSRDDVDFFSH 1140

Query: 1141 LEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGE 1200
            LEMH+RQ+HPPLCGRDHM+YRSAYFPVKDVIDGDLCEQFPTL LD QRKIADELDRTPGE
Sbjct: 1141 LEMHLRQDHPPLCGRDHMSYRSAYFPVKDVIDGDLCEQFPTLPLDAQRKIADELDRTPGE 1200

Query: 1201 ILKKLEEIRNKIV 1213
            ILKKLEE+RNKI+
Sbjct: 1201 ILKKLEEVRNKII 1213


>gi|374095609|gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
          Length = 1212

 Score = 2289 bits (5932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1090/1214 (89%), Positives = 1166/1214 (96%), Gaps = 3/1214 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLY+LTLQQ TGI+ AINGNFSG K+ EI VARGKVL+LLRP+ +G+I+T++S EIFGA
Sbjct: 1    MYLYNLTLQQATGIVCAINGNFSGGKSQEIAVARGKVLDLLRPDENGKIQTILSVEIFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN  KNVFDK+HQETFGKSGCRRIVPGQYL
Sbjct: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A+DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTI YSICG+DCGFDNPI
Sbjct: 121  AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIFYSICGVDCGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FA+IELDYSEADQDSTGQAA+EAQK+LTFYELDLGLNHVSRKWSE VDNGANMLVTVPGG
Sbjct: 181  FASIELDYSEADQDSTGQAAAEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR DLPAERGVLIVSAA H+QK++FFFLLQ
Sbjct: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRYDLPAERGVLIVSAAMHKQKSMFFFLLQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            TEYGDIFKVTL+HDN+ V+EL+IKYFDTIPVTAS+CVLKSG+LFAASEFGNHALYQFQAI
Sbjct: 301  TEYGDIFKVTLDHDNDRVTELRIKYFDTIPVTASLCVLKSGFLFAASEFGNHALYQFQAI 360

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G +PDVE+SS+TLMETEEGFQPVFFQPR LKNLVRI+QVESLMPIMDM+I NLFEEE PQ
Sbjct: 361  GDEPDVESSSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKIINLFEEETPQ 420

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            IFTLCGRGPRSSLRILRPGLA+SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF NAT
Sbjct: 421  IFTLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANAT 480

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR
Sbjct: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
            TIVKVGSNRLQVVIALSGGE+IYFEVDMTGQL+EVEK EMSGDVACLDIA VPEGR+RSR
Sbjct: 541  TIVKVGSNRLQVVIALSGGEIIYFEVDMTGQLMEVEKQEMSGDVACLDIAPVPEGRQRSR 600

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            FLAVGSYDN IRILSLDPDDCMQ+LS+QSVSSPPESLLFLEVQASVGGEDGADHPASLFL
Sbjct: 601  FLAVGSYDNCIRILSLDPDDCMQVLSLQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
            NAGLQNGVLFRTVVDMVTGQLSD+RSRFLGLR PKLFSV++ GR AMLCLSSRPWLGYIH
Sbjct: 661  NAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIIRGRRAMLCLSSRPWLGYIH 720

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
            +G FLLTPLSYETLE+AASFSSDQC EGVV+VAG+ALRVFTIERLGETFNETA+PLRYTP
Sbjct: 721  QGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETAIPLRYTP 780

Query: 781  RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN-GDDENK 839
            R+FVLQPK+KL+VIIE+DQGA  AE+RE AKKECFE AGMGE  NG ++QMEN GDDE+K
Sbjct: 781  RKFVLQPKRKLLVIIESDQGAYAAEQRENAKKECFEDAGMGE--NGKVEQMENGGDDEDK 838

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGT 899
             DPLSDEQYGYPK ESD+WVSCIRVLDPR+ANTTCLLELQDNEAAFSIC VNFHDKE+GT
Sbjct: 839  EDPLSDEQYGYPKVESDRWVSCIRVLDPRTANTTCLLELQDNEAAFSICLVNFHDKEYGT 898

Query: 900  LLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAG 959
            LLAVGTAKGLQFWPKR+I +GYIHIYRFVE+GKSLELLHKTQV+ +PLALCQFQG+LLAG
Sbjct: 899  LLAVGTAKGLQFWPKRSISSGYIHIYRFVEDGKSLELLHKTQVDDVPLALCQFQGKLLAG 958

Query: 960  IGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLY 1019
            +G VLRLYDLGK++LLRKCENKLFPNTI SI+TYRDRIYVGDIQESFH+CKYRRDENQLY
Sbjct: 959  VGSVLRLYDLGKRKLLRKCENKLFPNTITSIHTYRDRIYVGDIQESFHYCKYRRDENQLY 1018

Query: 1020 IFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1079
            IFADD VPRWLTA++HIDFDTMAGADKFGNIYFVRL QDVSDEIEEDPTGGKIKWEQGKL
Sbjct: 1019 IFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLAQDVSDEIEEDPTGGKIKWEQGKL 1078

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS 1139
            NGAPNK+EEIVQFHVGDVVT LQKASL+P GGE VIYGTVMGSLGA+LAF+SRDDVDFFS
Sbjct: 1079 NGAPNKVEEIVQFHVGDVVTCLQKASLIPSGGECVIYGTVMGSLGALLAFTSRDDVDFFS 1138

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
            HLEMHMRQE+PPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL +D+QRKIADELDRTPG
Sbjct: 1139 HLEMHMRQENPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDMQRKIADELDRTPG 1198

Query: 1200 EILKKLEEIRNKIV 1213
            EILKKLEE+RNKIV
Sbjct: 1199 EILKKLEEVRNKIV 1212


>gi|356536504|ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
          Length = 1214

 Score = 2278 bits (5903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1080/1214 (88%), Positives = 1164/1214 (95%), Gaps = 1/1214 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLYSLTLQ+PTGII AINGNFSG K+ EIVVARGKVL+LLRP+++GRI+T++S EIFGA
Sbjct: 1    MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLAQFRL G+QKDYIVVGSDSGRI+ILEYN  KNVFDKIHQETFGKSGCRRIVPGQYL
Sbjct: 61   IRSLAQFRLMGAQKDYIVVGSDSGRIIILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A+DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHT+VYSICG+DCGF+NPI
Sbjct: 121  AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFENPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQDSTGQAASEAQK+LTFYELDLGLNHVSRKWSE VDNGAN+LVTVPGG
Sbjct: 181  FAAIELDYSEADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANLLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGPSGVLVCAENFVIYKNQGHP+VRAVIPRRADLPAERGVLIVSAA H+ K +FFFLLQ
Sbjct: 241  GDGPSGVLVCAENFVIYKNQGHPEVRAVIPRRADLPAERGVLIVSAAMHKLKNMFFFLLQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            TEYGDIFKVTLEH+N+ VSELKIKYFDTIPVTASMCVLKSG+LFAASEFGNHALYQF++I
Sbjct: 301  TEYGDIFKVTLEHNNDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFKSI 360

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G D DVEASS+TLMETEEGFQPVFFQPR LKNLVRI+QVESLMPIMDM+++NLFEEE PQ
Sbjct: 361  GDDDDVEASSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKVSNLFEEETPQ 420

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            I+TLCGRGPRSSLRILR GLAVSEMAVS+LPG+PSAVWTVKKNV DEFDAYIVVSF NAT
Sbjct: 421  IYTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAYIVVSFTNAT 480

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP+GIRHIREDGRINEWRTPGKR
Sbjct: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR 540

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
            +I KVGSN LQVVIALSGGELIYFE+D+TGQL+EVEKHEMSGDVACLDIA VPEGR+RSR
Sbjct: 541  SISKVGSNTLQVVIALSGGELIYFEMDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR 600

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            FLAVGSYD TIRILSLDPDDCMQ LSVQSVSS PESLLFLEVQASVGGEDGADHPASLFL
Sbjct: 601  FLAVGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFL 660

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
            NAGLQNGV+FRTVVDMVTGQLSDSRSRFLGLR PKLF ++V G+ AMLCLSSRPWLGYIH
Sbjct: 661  NAGLQNGVMFRTVVDMVTGQLSDSRSRFLGLRAPKLFPIIVRGKRAMLCLSSRPWLGYIH 720

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
            +G FLLTPLSYETLEYAASFSSDQCVEGVV+VAG ALR+FTIERLGETFNET +PLRYTP
Sbjct: 721  QGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTP 780

Query: 781  RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN-GDDENK 839
            R+FVLQPK+KL+V+IE+DQGALTAEEREAA+KECFEAA  GENG G+ DQMEN GDDE+K
Sbjct: 781  RKFVLQPKRKLLVMIESDQGALTAEEREAARKECFEAAQAGENGTGSADQMENGGDDEDK 840

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGT 899
             DPLSDE YGYPKAESDKW SCIRVLDPR++NTTCLLELQ+NEAAFSICTVNFHDKE+GT
Sbjct: 841  DDPLSDEHYGYPKAESDKWASCIRVLDPRTSNTTCLLELQENEAAFSICTVNFHDKEYGT 900

Query: 900  LLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAG 959
            LLAVGTAKGLQF PKR + AG+IHIYRFVE+G+SLELLHKTQVEG+PLALCQFQGRLLAG
Sbjct: 901  LLAVGTAKGLQFLPKRTVTAGFIHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAG 960

Query: 960  IGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLY 1019
            IGPVLRLYDLGKKRLLRKCENKLFPNTI+SI+ YRDRIYVGD+QESFH+CKYRRDENQLY
Sbjct: 961  IGPVLRLYDLGKKRLLRKCENKLFPNTIISIHAYRDRIYVGDVQESFHYCKYRRDENQLY 1020

Query: 1020 IFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1079
            IFADD VPRWLTA++HIDFDTMAG DKFGNIYFVRLPQDVSDEIEEDPTGG+IKWEQGKL
Sbjct: 1021 IFADDCVPRWLTASYHIDFDTMAGTDKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKL 1080

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS 1139
            NGAPNK+EEIVQFHVGDVVT LQKASL+PGGGE +++GTVMGS+GA+ AF+SRDDVDFFS
Sbjct: 1081 NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIVFGTVMGSVGALHAFTSRDDVDFFS 1140

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
            HLEMHMRQ+HPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ+PTL +DLQRKIADELDRTPG
Sbjct: 1141 HLEMHMRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPTLPMDLQRKIADELDRTPG 1200

Query: 1200 EILKKLEEIRNKIV 1213
            EILKKLEE+RNKI+
Sbjct: 1201 EILKKLEEVRNKII 1214


>gi|356576847|ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
          Length = 1214

 Score = 2266 bits (5873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1075/1214 (88%), Positives = 1160/1214 (95%), Gaps = 1/1214 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLYSLTLQ+PTGII AINGNFSG K+ EIVVARGKVL+LLRP+++GRI+T++S EIFGA
Sbjct: 1    MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLAQFRL G+QKDYIVVGSDSGRIVILEYN  KNVFDKIHQETFGKSGCRRIVPGQYL
Sbjct: 61   IRSLAQFRLMGAQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A+DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHT+VYSICG+DCGF+NPI
Sbjct: 121  AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFENPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQDSTG AASEAQK+LTFYELDLGLNHVSRKWSE VDNGAN+LVTVPGG
Sbjct: 181  FAAIELDYSEADQDSTGLAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANLLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGPSGVLVCAENFVIYKNQ HP+VRAVIPRR DLPAERGVLIVSAA H+ K +FFFLLQ
Sbjct: 241  GDGPSGVLVCAENFVIYKNQAHPEVRAVIPRRTDLPAERGVLIVSAAMHKLKNMFFFLLQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            TEYGDIFKVTLEH+N+ VSELKIKYFDTIPVTASMCVLKSG+LFAASEFGNHALYQF++I
Sbjct: 301  TEYGDIFKVTLEHNNDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFKSI 360

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G + DVEASS+TLMETE+GFQPVFFQPR LKNLVRI+QVESLMPIMDM+++NLFEEE PQ
Sbjct: 361  GDEDDVEASSATLMETEQGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKVSNLFEEETPQ 420

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            I+TLCGRGPRSSLRILR GLAVSEMAVS+LPG+PSAVWTVKKN  DEFDAYIVVSF NAT
Sbjct: 421  IYTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNAIDEFDAYIVVSFTNAT 480

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP+GIRHIREDGRINEWRTPGKR
Sbjct: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR 540

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
            TI KVGSNRLQVVIALSGGELIYFEVD+TGQL+EVEKHEMSGDVACLDIA VPEGR+RSR
Sbjct: 541  TISKVGSNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR 600

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            FLAVGSYD TIRILSLDPDDCMQ LSVQSVSS PESLLFLEVQASVGGEDGADHPASLFL
Sbjct: 601  FLAVGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFL 660

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
            NAGLQNGV+FRTVVDMVTGQLSDSRSRFLGLR PKLF ++V G+ AMLCLSSRPWLGYIH
Sbjct: 661  NAGLQNGVMFRTVVDMVTGQLSDSRSRFLGLRAPKLFPIIVRGKRAMLCLSSRPWLGYIH 720

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
            +G FLLTPLSYETLEYAASFSSDQCVEGVV+VAG ALR+FTIERLGETFNET +PLRYTP
Sbjct: 721  QGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTP 780

Query: 781  RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN-GDDENK 839
            R+FVLQPK+KL+V+IE+DQGALTAEEREAA+KECFE+A  GENG  + DQMEN G+DE+K
Sbjct: 781  RKFVLQPKRKLLVMIESDQGALTAEEREAARKECFESAQAGENGTESADQMENGGEDEDK 840

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGT 899
             DPLSDE YGYPKAESDKW SCIRVLDPR+ NTTCLLELQ+NEAAFSICT+NFHDKE+GT
Sbjct: 841  DDPLSDEHYGYPKAESDKWASCIRVLDPRTGNTTCLLELQENEAAFSICTINFHDKEYGT 900

Query: 900  LLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAG 959
            LLAVGTAKGLQF PKR I AG+IHIYRFVE+G+SLELLHKTQVEG+PLALCQFQGRLLAG
Sbjct: 901  LLAVGTAKGLQFLPKRTITAGFIHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAG 960

Query: 960  IGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLY 1019
            IGPVLRLYDLGK+RLLRKCENKLFPNTIVSI+ YRDRIYVGD+QESFH+CKYRRDENQLY
Sbjct: 961  IGPVLRLYDLGKRRLLRKCENKLFPNTIVSIHAYRDRIYVGDVQESFHYCKYRRDENQLY 1020

Query: 1020 IFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1079
            IFADD VPRWLTA++HIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG+IKWEQGKL
Sbjct: 1021 IFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKL 1080

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS 1139
            NGAPNK+EEIVQFH+GDVVT LQKASL+PGGGE +++GTVMGS+GA+ AF+SRDDVDFFS
Sbjct: 1081 NGAPNKVEEIVQFHIGDVVTCLQKASLIPGGGECIVFGTVMGSVGALHAFTSRDDVDFFS 1140

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
            HLEMHMRQ+HPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ+PTL +DLQRKIADELDRTPG
Sbjct: 1141 HLEMHMRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPTLPMDLQRKIADELDRTPG 1200

Query: 1200 EILKKLEEIRNKIV 1213
            EILKKLEE+RNKI+
Sbjct: 1201 EILKKLEEVRNKII 1214


>gi|18410222|ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
 gi|18410226|ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana]
 gi|7019653|emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana]
 gi|7019655|emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana]
 gi|332645831|gb|AEE79352.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
 gi|332645833|gb|AEE79354.1| putative splicing factor [Arabidopsis thaliana]
          Length = 1214

 Score = 2241 bits (5808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1060/1214 (87%), Positives = 1156/1214 (95%), Gaps = 1/1214 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLYSLTLQQ TGI+ AINGNFSG KT EI VARGK+L+LLRP+ +G+I+T+ S E+FGA
Sbjct: 1    MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLAQFRLTG+QKDYIVVGSDSGRIVILEYN  KNVFDK+HQETFGKSGCRRIVPGQY+
Sbjct: 61   IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYV 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRAVMIGACEKQKLVYVLNRDT ARLTISSPLEAHKSHTI YS+CG+DCGFDNPI
Sbjct: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQD TGQAASEAQK+LTFYELDLGLNHVSRKWS PVDNGANMLVTVPGG
Sbjct: 181  FAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGPSGVLVCAENFVIY NQGHPDVRAVIPRR DLPAERGVL+VSAA H+QKT+FFFL+Q
Sbjct: 241  ADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            TEYGD+FKVTL+H+ +HVSELK+KYFDTIPV +S+CVLK G+LF+ASEFGNH LYQFQAI
Sbjct: 301  TEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAI 360

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G +PDVE+SSS LMETEEGFQPVFFQPR LKNLVRI+QVESLMP+MDM++ N+FEEE PQ
Sbjct: 361  GEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQ 420

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            IF+LCGRGPRSSLRILRPGLA++EMAVSQLPG PSAVWTVKKNV+DEFDAYIVVSF NAT
Sbjct: 421  IFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNAT 480

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVLSIGE VEEV+DSGFLDTTPSLAVSLIGDDSLMQVHP+GIRHIREDGRINEWRTPGKR
Sbjct: 481  LVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR 540

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
            +IVKVG NRLQVVIALSGGELIYFE DMTGQL+EVEKHEMSGDVACLDIA VPEGRKRSR
Sbjct: 541  SIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSR 600

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            FLAVGSYDNT+RILSLDPDDC+QILSVQSVSS PESLLFLEVQAS+GG+DGADHPA+LFL
Sbjct: 601  FLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFL 660

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
            N+GLQNGVLFRTVVDMVTGQLSDSRSRFLGL+PPKLFS+ V GR+AMLCLSSRPWLGYIH
Sbjct: 661  NSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIH 720

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
            RG F LTPLSYETLE+AA FSSDQC EGVVSVAG+ALR+F I+RLGETFNET +PLRYTP
Sbjct: 721  RGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTP 780

Query: 781  RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENG-DDENK 839
            R+FVL PK+KL+VIIE+DQGA TAEEREAA+KECFEA G+GENGNGN DQMENG DDE+K
Sbjct: 781  RKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDK 840

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGT 899
             DPLSDEQYGYPKAES+KWVSCIRVLDP++A TTCLLELQDNEAA+S+CTVNFHDKE+GT
Sbjct: 841  EDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGT 900

Query: 900  LLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAG 959
            LLAVGT KG+QFWPK+N+VAG+IHIYRFVE+GKSLELLHKTQVEG+PLALCQFQGRLLAG
Sbjct: 901  LLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAG 960

Query: 960  IGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLY 1019
            IGPVLRLYDLGKKRLLRKCENKLFPNTI+SI TYRDRIYVGDIQESFH+CKYRRDENQLY
Sbjct: 961  IGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLY 1020

Query: 1020 IFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1079
            IFADD VPRWLTA+HH+DFDTMAGADKFGN+YFVRLPQD+S+EIEEDPTGGKIKWEQGKL
Sbjct: 1021 IFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKL 1080

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS 1139
            NGAPNK++EIVQFHVGDVVT LQKAS++PGG ES++YGTVMGS+GA+ AF+SRDDVDFFS
Sbjct: 1081 NGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFS 1140

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
            HLEMHMRQE+PPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL +DLQRKIADELDRTP 
Sbjct: 1141 HLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPA 1200

Query: 1200 EILKKLEEIRNKIV 1213
            EILKKLE+ RNKI+
Sbjct: 1201 EILKKLEDARNKII 1214


>gi|357478269|ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncatula]
 gi|355510475|gb|AES91617.1| Splicing factor 3B subunit [Medicago truncatula]
          Length = 1225

 Score = 2152 bits (5575), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1028/1225 (83%), Positives = 1133/1225 (92%), Gaps = 12/1225 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTK---TPEIVVARGKVLELLRPENSGRIETLVSTEI 57
            MYLY+LTLQ+PTGI+ AINGNFSG+    T EIVVARGKVLELLRP+  GRI++++S ++
Sbjct: 1    MYLYNLTLQRPTGIVCAINGNFSGSDDGITQEIVVARGKVLELLRPDKFGRIQSILSVQV 60

Query: 58   FGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPG 117
            FG IRSL+QFRLTG+QKD+IVVGSDSGRIVIL+YN  KNVFDKIHQETFGKSGCRRIVPG
Sbjct: 61   FGTIRSLSQFRLTGAQKDFIVVGSDSGRIVILDYNKQKNVFDKIHQETFGKSGCRRIVPG 120

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            QYLA+DPKGRAVMI ACEK+KLVYVLNRD+ ARLTISSPLEA+KSHTIV+SIC +DCGF+
Sbjct: 121  QYLAIDPKGRAVMIAACEKKKLVYVLNRDSLARLTISSPLEANKSHTIVFSICAVDCGFE 180

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTV 237
            NPIFAAIELD S+ADQD+TG AAS+AQK+L FYELDLGLNHVSRKWS+ VDNGANMLVTV
Sbjct: 181  NPIFAAIELDCSDADQDATGVAASQAQKHLIFYELDLGLNHVSRKWSDQVDNGANMLVTV 240

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL--- 294
            PGG DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAA H+ K L   
Sbjct: 241  PGGADGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAMHKTKNLKPE 300

Query: 295  ---FFFLLQTEYGDIFKVTL-EHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
                FFLLQTEYGDIFKVTL +   + VSEL IKYFDTI V  S+CVLKSG+LFAASEFG
Sbjct: 301  EFKLFFLLQTEYGDIFKVTLTDGGGDRVSELNIKYFDTIAVAVSICVLKSGFLFAASEFG 360

Query: 351  NHALYQFQAIGADP-DVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR 409
            NHALYQF+ IG D  DV ASS++LMETEEGFQPVFFQPR LKNLVRI+QVESLMP+MDM+
Sbjct: 361  NHALYQFKGIGDDDNDVGASSASLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPVMDMK 420

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
            ++NLFEEE PQIFTLCGRGPRSSLRI+R GLAVSEMAVS+LPG+PSAVWTVKKNV DEFD
Sbjct: 421  VSNLFEEETPQIFTLCGRGPRSSLRIMRTGLAVSEMAVSKLPGIPSAVWTVKKNVMDEFD 480

Query: 470  AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG 529
            AYIVVSF NATLVLSIGET +EVSDSGFLDT PSLAVSLIGDDSLMQVHP+GIRHIREDG
Sbjct: 481  AYIVVSFTNATLVLSIGETADEVSDSGFLDTAPSLAVSLIGDDSLMQVHPNGIRHIREDG 540

Query: 530  RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
            R NEW+T GKRTI KVGSNRLQVVIAL+GGELIYFEVD+TGQL+EVE+HEMSGDVACLDI
Sbjct: 541  RTNEWQTSGKRTIAKVGSNRLQVVIALNGGELIYFEVDVTGQLMEVERHEMSGDVACLDI 600

Query: 590  ASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGE 649
            A VP+GR RSRFLAVGSYD TIRILSLDPDDCMQ L +QS+SS PESLLFLEVQASVGGE
Sbjct: 601  APVPKGRLRSRFLAVGSYDKTIRILSLDPDDCMQTLGIQSLSSAPESLLFLEVQASVGGE 660

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
            DGADHPASLFLNAGLQNGVL RTVVDMVTG LSD+RSRFLGL+ PKLF ++V G+ AMLC
Sbjct: 661  DGADHPASLFLNAGLQNGVLSRTVVDMVTGLLSDTRSRFLGLKAPKLFPIIVRGKRAMLC 720

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
            LSSRPWLGYIH+G FLLTPLSYETLEYAASFSSDQC EGVVSVA  ALR+FT+ERLGETF
Sbjct: 721  LSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCFEGVVSVASEALRIFTVERLGETF 780

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            N+  +PLRYTPR+FVLQPK+KL+V+IE+DQGALTAEEREAA+KECFEAA  GEN  G+ D
Sbjct: 781  NQNVIPLRYTPRKFVLQPKRKLLVVIESDQGALTAEEREAARKECFEAAHAGENKTGSED 840

Query: 830  QMEN-GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
            QMEN G+DE+  D LSDE YGYPK+ESDKWVSCIRVLDPR+ NTTCLLELQ+NEAAFSIC
Sbjct: 841  QMENGGEDEDNDDSLSDEHYGYPKSESDKWVSCIRVLDPRTGNTTCLLELQENEAAFSIC 900

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
            TVNFHDKE+GTLLAVGTAKGLQF PKR++ AG+IHIYRF+++G+SLELLHKTQVEG+PLA
Sbjct: 901  TVNFHDKEYGTLLAVGTAKGLQFTPKRSLTAGFIHIYRFLDDGRSLELLHKTQVEGVPLA 960

Query: 949  LCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHF 1008
            LCQFQGRLLAGIGPVLRLYDLGK+RLLRKCENK FP++IVSI+ YRDRIYVG IQESFH+
Sbjct: 961  LCQFQGRLLAGIGPVLRLYDLGKRRLLRKCENKSFPSSIVSIHAYRDRIYVGGIQESFHY 1020

Query: 1009 CKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1068
            CKYRRDENQLYIFADDSVPRWLT+++HIDFDTMAGADKFGNI+F RLPQDVSDEIEEDPT
Sbjct: 1021 CKYRRDENQLYIFADDSVPRWLTSSYHIDFDTMAGADKFGNIFFARLPQDVSDEIEEDPT 1080

Query: 1069 GGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLA 1128
            GGKIKWEQGKLNGAPNK+EEIVQFHVGDV+TSLQKASLVPGGGE ++YGTVMGS+GA+ A
Sbjct: 1081 GGKIKWEQGKLNGAPNKVEEIVQFHVGDVITSLQKASLVPGGGECIVYGTVMGSVGALHA 1140

Query: 1129 FSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQR 1188
            F+SRDDVDFFSHLEMHMRQ++PPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL +DLQR
Sbjct: 1141 FTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQR 1200

Query: 1189 KIADELDRTPGEILKKLEEIRNKIV 1213
            KIADELDRTPGEILKKLEE+RNKI+
Sbjct: 1201 KIADELDRTPGEILKKLEEVRNKII 1225


>gi|357478323|ref|XP_003609447.1| Splicing factor 3B subunit [Medicago truncatula]
 gi|355510502|gb|AES91644.1| Splicing factor 3B subunit [Medicago truncatula]
          Length = 1225

 Score = 2131 bits (5522), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1017/1225 (83%), Positives = 1131/1225 (92%), Gaps = 12/1225 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTK---TPEIVVARGKVLELLRPENSGRIETLVSTEI 57
            MYLY+LTLQ+PTGI+ AINGNFSG+    T EIVVARGKVLELLRP+  GRI++++S ++
Sbjct: 1    MYLYNLTLQRPTGIVCAINGNFSGSDDGITQEIVVARGKVLELLRPDKFGRIQSILSVQV 60

Query: 58   FGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPG 117
            FG IRSL+QFRLTG+QKD+IVVGSDSGRIVIL+YN  KNVFDKIHQETFGKSGCRRIVPG
Sbjct: 61   FGTIRSLSQFRLTGAQKDFIVVGSDSGRIVILDYNKQKNVFDKIHQETFGKSGCRRIVPG 120

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            QYLA+DPKGRAVMI ACEK+KLVYVLNRD+ ARLTISSPLEA+KSHTIV+SIC +DCGF+
Sbjct: 121  QYLAIDPKGRAVMIAACEKKKLVYVLNRDSLARLTISSPLEANKSHTIVFSICAVDCGFE 180

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTV 237
            NPIFAAIELD S+ADQD+TG AAS+AQK+L FYELDLGLNHVSRKWS+ VDNGANMLVTV
Sbjct: 181  NPIFAAIELDCSDADQDATGVAASQAQKHLIFYELDLGLNHVSRKWSDQVDNGANMLVTV 240

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL--- 294
            PGG DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAA H+ K L   
Sbjct: 241  PGGADGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAMHKTKNLKPE 300

Query: 295  ---FFFLLQTEYGDIFKVTL-EHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
                FFLLQTEYGDIFKVTL +   + VSEL IKYFDTI V  S+CVLKSG+LFAASEFG
Sbjct: 301  EFKLFFLLQTEYGDIFKVTLTDGGGDRVSELNIKYFDTIAVAVSICVLKSGFLFAASEFG 360

Query: 351  NHALYQFQAIGADP-DVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR 409
            NHALYQF+ IG D  DV ASS++LMETEEGFQPVFF PR LKNLVRI+ VESLM IMDM+
Sbjct: 361  NHALYQFKGIGDDDNDVVASSASLMETEEGFQPVFFLPRRLKNLVRIDPVESLMSIMDMK 420

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
            ++NLFEEE PQIFTLCGRGPRSSLRI+R GLAVSEMAVS+LPG+PSAVWTVKKNV DEFD
Sbjct: 421  VSNLFEEETPQIFTLCGRGPRSSLRIMRTGLAVSEMAVSKLPGIPSAVWTVKKNVMDEFD 480

Query: 470  AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG 529
            +YIVVSF NATLVLSIGETVEEVS+SGFLDT PSLAVSLIGDDS+MQVHP+GIRHIREDG
Sbjct: 481  SYIVVSFTNATLVLSIGETVEEVSNSGFLDTAPSLAVSLIGDDSIMQVHPNGIRHIREDG 540

Query: 530  RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
            R NEW+T GKRTI KVGSNRLQVVIAL+GGEL+YFEVD+TGQL+EVEKHEMSGDVACLDI
Sbjct: 541  RTNEWQTSGKRTIAKVGSNRLQVVIALNGGELVYFEVDVTGQLMEVEKHEMSGDVACLDI 600

Query: 590  ASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGE 649
            A VP+GR RSRFLAVGSYDNTIRILSLDPDDCMQ LS+QS+SS PESLLFLEVQASVGGE
Sbjct: 601  APVPKGRLRSRFLAVGSYDNTIRILSLDPDDCMQTLSIQSLSSAPESLLFLEVQASVGGE 660

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
            DGADHPASLFL+AGLQ+GVL RTVVD VTG LSD+RSRFLGL+ PKLF +++G + AMLC
Sbjct: 661  DGADHPASLFLSAGLQSGVLSRTVVDTVTGLLSDARSRFLGLKAPKLFPIILGRKCAMLC 720

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
            LSSRPWLGYIH+G FLLTPLSYETLEYAASFSSDQC+EGVVSV+G ALR+FT+ERLGETF
Sbjct: 721  LSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCLEGVVSVSGEALRIFTVERLGETF 780

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            N+T +PLRYTPR+ VLQPK+KL+V+IE+DQGALTA+EREAA+KECFEAA  GEN  G+ D
Sbjct: 781  NQTVIPLRYTPRKLVLQPKRKLLVVIESDQGALTAKEREAARKECFEAAQTGENATGSED 840

Query: 830  QMEN-GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
            QMEN G+DE++ D LSDE YGYPK+ESDKWVSCIRVLDPR+ NTTCLLELQ+NEAAFSIC
Sbjct: 841  QMENDGEDEDQGDSLSDEHYGYPKSESDKWVSCIRVLDPRTGNTTCLLELQENEAAFSIC 900

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
            TVNFHDKE+GTLLAVGTAKGLQF PKR++  G+IHIYRF+++G+SLELLHKTQVEG+PLA
Sbjct: 901  TVNFHDKEYGTLLAVGTAKGLQFTPKRSLTVGFIHIYRFLDDGRSLELLHKTQVEGVPLA 960

Query: 949  LCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHF 1008
            LCQFQGRLLAGIGPVLRLYDLGK+RLLRKCENK FP +IVSI+ YRDRIYVGDIQESFH+
Sbjct: 961  LCQFQGRLLAGIGPVLRLYDLGKRRLLRKCENKSFPISIVSIHAYRDRIYVGDIQESFHY 1020

Query: 1009 CKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1068
            CKYRRDENQLYIFADDSVPRWLTA++HIDFDTMAGADKFGNI+F RLPQDVSDE+EEDPT
Sbjct: 1021 CKYRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNIFFARLPQDVSDEVEEDPT 1080

Query: 1069 GGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLA 1128
             GKIKWEQGKLNGA NK+EEIVQFHVGDV+TSLQKA+LVPGGGE ++YGTVMG +GA+ A
Sbjct: 1081 SGKIKWEQGKLNGALNKVEEIVQFHVGDVITSLQKAALVPGGGECIVYGTVMGCVGALHA 1140

Query: 1129 FSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQR 1188
            F+SRDDVDFFSHLEMHMRQ++PPLCGRDHMAYRSAYFPVKDV+DGDLCEQFPTL +DLQR
Sbjct: 1141 FTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRSAYFPVKDVLDGDLCEQFPTLPMDLQR 1200

Query: 1189 KIADELDRTPGEILKKLEEIRNKIV 1213
            KIADELDRTPGEILKKLEE+RNKI+
Sbjct: 1201 KIADELDRTPGEILKKLEELRNKII 1225


>gi|168064351|ref|XP_001784126.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664326|gb|EDQ51050.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1214

 Score = 2115 bits (5479), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 998/1217 (82%), Positives = 1125/1217 (92%), Gaps = 7/1217 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LYSLTLQ  TGI+ A  GNF+G KT EIVVARGKVL+LLRP+++G+++TL+S E+FGA
Sbjct: 1    MFLYSLTLQPATGIVCATYGNFTGGKTQEIVVARGKVLDLLRPDDNGKLQTLLSVEVFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN  KN+F+K+HQETFGKSGCRRIVPGQYL
Sbjct: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNLFEKVHQETFGKSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRAVMIGACEKQKLVYVLNRD AARLTISSPLEAHKSHTIVYSI G+DCGFDNPI
Sbjct: 121  AVDPKGRAVMIGACEKQKLVYVLNRDNAARLTISSPLEAHKSHTIVYSITGVDCGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQDSTGQAA+EAQK+LTFYELDLGLNHV RKW+EP+DNGANMLVTVPGG
Sbjct: 181  FAAIELDYSEADQDSTGQAANEAQKHLTFYELDLGLNHVVRKWTEPIDNGANMLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGPSGVLVCAENFVIYKNQ  PDVRAVIPRR DLP  RGVLIVSAATH+QK LFFFLLQ
Sbjct: 241  GDGPSGVLVCAENFVIYKNQNQPDVRAVIPRRQDLPPNRGVLIVSAATHKQKALFFFLLQ 300

Query: 301  TEYGDIFKVTLEHD-NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            TEYGDIFKVTL++D ++ V+ELKIKYFDTIPVT++MCVLK+G+LFAASEFGNH+LYQFQ+
Sbjct: 301  TEYGDIFKVTLDYDKDDQVTELKIKYFDTIPVTSAMCVLKAGFLFAASEFGNHSLYQFQS 360

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            IG DP+VE+SSSTL+ETEEG+QPVFFQPR LKNLV+I+ +ESLMPIMDM++ANLFEEE P
Sbjct: 361  IGEDPEVESSSSTLVETEEGYQPVFFQPRKLKNLVQIDDIESLMPIMDMKVANLFEEETP 420

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QIF+LCGRGPRSSLRILRPGLAV+EMAVS LPGVPSAVWTVKK+ NDEFDAYIVVSF NA
Sbjct: 421  QIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAYIVVSFVNA 480

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
            TLVLSIGETVEEVSDSGFLDTTPSLA+SL+GDDSLMQVHPSGIRHIR DGRINEW+TPGK
Sbjct: 481  TLVLSIGETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRADGRINEWKTPGK 540

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            +TIVKVG NR+QVVIALSGGELIYFE+DM+GQL+E+EK +M+GDVACLDIA VPEGR+RS
Sbjct: 541  KTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLDIAPVPEGRQRS 600

Query: 600  RFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
            RFLAVGSYD+TIRILSLDPDDCMQILSVQ+VSSPPESLL LEVQAS GGEDGADHPAS+F
Sbjct: 601  RFLAVGSYDSTIRILSLDPDDCMQILSVQAVSSPPESLLLLEVQASTGGEDGADHPASVF 660

Query: 660  LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYI 719
            LNAGLQNGVL RT VDMVTGQLSD+R+RFLGLR PKLFS +V GR AMLCLSSRPWLGYI
Sbjct: 661  LNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSALVRGRRAMLCLSSRPWLGYI 720

Query: 720  HRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYT 779
            H+G FLLTPLSYETLEYAASFSSDQC EGVV+VAG+ALRVFTIERLGETFN+T +PLRYT
Sbjct: 721  HQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNQTVVPLRYT 780

Query: 780  PRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG--NGNMDQMENGDDE 837
            PR+F+L PK+  ++I+E+DQGA   E+REA KKE  EAAG  ENG  +G  + M +G+DE
Sbjct: 781  PRKFILHPKQNSLIILESDQGAFNTEDREANKKEAVEAAGYHENGKADGEDEDMADGEDE 840

Query: 838  NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD-KE 896
               +PL DEQYGYPKAES+KW SCIRVLDP+++ TTCLLELQ+NEAAFS+C VNFHD KE
Sbjct: 841  ---EPLPDEQYGYPKAESNKWASCIRVLDPKTSTTTCLLELQENEAAFSLCAVNFHDNKE 897

Query: 897  HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRL 956
             GTL+AVGTAK LQF PK+    G+IHIYRF +EGK LEL+HKT V+G+P ALCQFQGRL
Sbjct: 898  LGTLIAVGTAKDLQFMPKKEASGGFIHIYRFADEGKVLELVHKTPVDGVPTALCQFQGRL 957

Query: 957  LAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN 1016
            L G+G VLR+YDLGK++LLRKCENK FPNTI++I+TY DRIYVGDIQESFH+ KYRRDEN
Sbjct: 958  LVGVGQVLRIYDLGKRKLLRKCENKNFPNTIIAIHTYGDRIYVGDIQESFHYVKYRRDEN 1017

Query: 1017 QLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ 1076
            QLY FADDS PRWLTA+ HIDFDTMAGADKFGNIY +RLPQDVS+EIE+DPTGGKIKWEQ
Sbjct: 1018 QLYTFADDSCPRWLTASLHIDFDTMAGADKFGNIYVMRLPQDVSEEIEDDPTGGKIKWEQ 1077

Query: 1077 GKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
            G+LNGAPNK+EEI+QFHVG+VVTSLQKASL+PGGGESV+YGT+MGS+GA+L FSSR+DVD
Sbjct: 1078 GRLNGAPNKVEEIIQFHVGEVVTSLQKASLIPGGGESVLYGTIMGSMGALLPFSSREDVD 1137

Query: 1137 FFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
            FFSHLEMH+RQE+PPLCGRDHM +RSAYFPVKDVIDGDLCEQ+P L+ +LQ+KIAD+LDR
Sbjct: 1138 FFSHLEMHLRQENPPLCGRDHMGFRSAYFPVKDVIDGDLCEQYPMLTSELQKKIADDLDR 1197

Query: 1197 TPGEILKKLEEIRNKIV 1213
            TPGEILKKLE+I+N+I+
Sbjct: 1198 TPGEILKKLEDIKNRII 1214


>gi|42409127|dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
            Group]
 gi|42409258|dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
            Group]
 gi|125538000|gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group]
          Length = 1234

 Score = 2109 bits (5465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1000/1234 (81%), Positives = 1124/1234 (91%), Gaps = 21/1234 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSG---------------TKTPEIVVARGKVLELLRPE- 44
            MYLYSLTLQ+ TG + A+ G+FSG               + T EI VARG  LELLRP+ 
Sbjct: 1    MYLYSLTLQRATGAVCAVIGSFSGRDSKKSAASGSSSSSSSTQEIAVARGTTLELLRPDP 60

Query: 45   NSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQE 104
             +GR+ TL+S ++FGAIRSLAQFRLTG+ KDY+VVGSDSGR+VILEY+P +N  DK+HQE
Sbjct: 61   ETGRLRTLLSVDVFGAIRSLAQFRLTGATKDYLVVGSDSGRLVILEYSPDRNRLDKVHQE 120

Query: 105  TFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHT 164
            TFGKSGCRRIVPGQ LAVDPKGRA+ I A EKQKLVYVLNRD AARLTISSPLEAHKS+T
Sbjct: 121  TFGKSGCRRIVPGQLLAVDPKGRALCIAALEKQKLVYVLNRDAAARLTISSPLEAHKSNT 180

Query: 165  IVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS 224
            + +S+  +DCGFDNP+FAAIEL+Y+E+D+D TGQAA +AQK+LTFYELDLGLNHVSRK S
Sbjct: 181  LTFSLTALDCGFDNPVFAAIELEYAESDRDPTGQAAEQAQKHLTFYELDLGLNHVSRKAS 240

Query: 225  EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIV 284
            EP+DNGAN+LVTVPGGGDGPSG+LVC +NFV+Y+NQGHP+VRAVIPRRADLPAERGVLIV
Sbjct: 241  EPIDNGANLLVTVPGGGDGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRADLPAERGVLIV 300

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
            +AATHRQK+LFFFLLQTEYGDIFKV LEH N+ V+EL+IKYFDTIPVT+++CVL+SG+LF
Sbjct: 301  AAATHRQKSLFFFLLQTEYGDIFKVDLEHSNDTVTELRIKYFDTIPVTSAICVLRSGFLF 360

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            AASEFGNHALYQF+ IG D DVE+SS+TLMET+EGFQPVFFQPR LKNL RI+++ESLMP
Sbjct: 361  AASEFGNHALYQFRDIGRDVDVESSSATLMETDEGFQPVFFQPRALKNLYRIDEIESLMP 420

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            IMDMR+ANLF+EE PQ+FT CGRGPRS+LRILRPGLA+SEMA S LP  P AVWTVKKN+
Sbjct: 421  IMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNI 480

Query: 465  NDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
            ND FDAYIVVSF N TLVLSIGET+EEVSDS FLDTT SLAVSL+G+DSLMQVHP+GIRH
Sbjct: 481  NDMFDAYIVVSFANVTLVLSIGETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRH 540

Query: 525  IREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV 584
            IREDGR+NEWRTPGK+TI KVGSNRLQVVIALSGGELIYFE+DMTGQL+EVEK +MSGDV
Sbjct: 541  IREDGRVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDV 600

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
            ACL IA VPEGR+RSRFLAVGS+DNTIRILS+DPDDC+Q LSVQSVSS PESL+FLEVQA
Sbjct: 601  ACLAIAPVPEGRQRSRFLAVGSFDNTIRILSVDPDDCLQPLSVQSVSSAPESLMFLEVQA 660

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            SVGGEDGADHPA+LFLNAGLQNGVLFRT VDMVTGQLSD+RSRFLGLRPPKLF  +V  R
Sbjct: 661  SVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHR 720

Query: 705  AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
             AMLCLSSRPWLGYIH+G FLLTPLS +TLE AASFSSDQC EGVV+VAG+ALR+FTIE 
Sbjct: 721  QAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIEH 780

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
            LGETFNETA+PLRYTPR+FV+ PKKK + +IE+D+GAL+AEEREAAKKEC EAAG+ ENG
Sbjct: 781  LGETFNETAIPLRYTPRKFVILPKKKYLAVIESDKGALSAEEREAAKKECLEAAGVTENG 840

Query: 825  NGNM-DQMENGDDE----NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
            N N  DQMENGD +       + L DEQYGYPKAES++WVSCIR+LDP+S +TTCLLELQ
Sbjct: 841  NANNGDQMENGDGQEDGAEDRNTLPDEQYGYPKAESERWVSCIRILDPKSRDTTCLLELQ 900

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            DNEAA SICTVNFHDKEHGTLLAVGTAKGLQFWPKRN+ AG+IHIY+FV+EG+SLELLHK
Sbjct: 901  DNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNLSAGFIHIYKFVDEGRSLELLHK 960

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            TQVE +PLALCQFQGRLLAG+G VLRLYDLGK++LLRKCENKLFP TIVSI+TYRDRIYV
Sbjct: 961  TQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSIHTYRDRIYV 1020

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+QESFH+CKYRRDENQLYIFADDSVPRWLTAA+HIDFDTMAGADKFGNIYF RLPQD+
Sbjct: 1021 GDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNIYFARLPQDL 1080

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            SDEIEEDPTGGKIKWEQGKLNGAPNK+EEIVQFHVGDVVT LQKASL+PGGGE +IYGTV
Sbjct: 1081 SDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTV 1140

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            MGS+GA+LAF+SR+DVDFFSHLEMH+RQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF
Sbjct: 1141 MGSVGALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1200

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            P+L  D+QRKIADELDRTPGEILKKLE+IRNKI+
Sbjct: 1201 PSLPADMQRKIADELDRTPGEILKKLEDIRNKII 1234


>gi|147787360|emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
          Length = 1143

 Score = 2108 bits (5461), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1026/1169 (87%), Positives = 1084/1169 (92%), Gaps = 54/1169 (4%)

Query: 46   SGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET 105
            +G+I+T++S EIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN  KNVFDKIHQET
Sbjct: 28   NGKIQTILSVEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQET 87

Query: 106  FGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTI 165
            FGKSGCRRIVPGQYLA+DPKGRAVMIGACEKQKLVYVLNRDT ARLTISSPLEAHKSHTI
Sbjct: 88   FGKSGCRRIVPGQYLAIDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTI 147

Query: 166  VYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE 225
            VYSI G+DCGFDNPIFAAIELDYSEADQDSTGQAASEAQK+LTFYELDLGLNHVSRKWSE
Sbjct: 148  VYSITGVDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSE 207

Query: 226  PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVS 285
             VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVS
Sbjct: 208  QVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVS 267

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
            AATHRQK++FFFLLQTEYGD+FKVTLEH+N+ +SELKIKYFDTIPVT+SMCVLKSG+LFA
Sbjct: 268  AATHRQKSMFFFLLQTEYGDVFKVTLEHENDRISELKIKYFDTIPVTSSMCVLKSGFLFA 327

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            ASEFGNH LYQFQAIG D DVE+SS++LMETEEGFQPVFFQPRGLKNLVRI+QVESLMPI
Sbjct: 328  ASEFGNHGLYQFQAIGDDADVESSSASLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPI 387

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            MDM+++NLFEEE PQIF LCGRGPRSS+RILRPGLA+SEMAVSQLPGVPSAVWTVKKNVN
Sbjct: 388  MDMKVSNLFEEETPQIFALCGRGPRSSIRILRPGLAISEMAVSQLPGVPSAVWTVKKNVN 447

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            DEFDAYIVVSF NATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI
Sbjct: 448  DEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 507

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVA 585
            REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQL+E           
Sbjct: 508  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLME----------- 556

Query: 586  CLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQAS 645
                        RSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQAS
Sbjct: 557  ------------RSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQAS 604

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
            VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSD+RSRFLGLR PKLFSV+V GR 
Sbjct: 605  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIVRGRR 664

Query: 706  AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            AMLCLSSRPWLGYIH+G FLLTPLSYETLE+AASFSSDQC EGVV+VAG+ALRVFTIERL
Sbjct: 665  AMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERL 724

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
            GETFNET +PLRYTPR+FVLQPK+KL+V+IE+DQGA  AEEREAAKKECFEAAGMGENGN
Sbjct: 725  GETFNETVIPLRYTPRKFVLQPKRKLLVVIESDQGAFAAEEREAAKKECFEAAGMGENGN 784

Query: 826  GNMDQMEN-GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
            GN++QMEN GDDE+K DPLSDEQYGYPKAESDKWVSCIR+LDPR+A TTCLLELQDNEAA
Sbjct: 785  GNVEQMENGGDDEDKDDPLSDEQYGYPKAESDKWVSCIRILDPRTATTTCLLELQDNEAA 844

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FSICTVNFHDKE+GTLLAVGTAK LQFWPKR+  AGYIHIYRF+E+GKSLELLHKTQVEG
Sbjct: 845  FSICTVNFHDKEYGTLLAVGTAKSLQFWPKRSFDAGYIHIYRFLEDGKSLELLHKTQVEG 904

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +PLALCQFQGRLLAGIG VLRLYDLGK+RLLRKCENKLFPNTIVSI+TYRDRIYVGDIQE
Sbjct: 905  VPLALCQFQGRLLAGIGSVLRLYDLGKRRLLRKCENKLFPNTIVSIHTYRDRIYVGDIQE 964

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SFH+CKYRRDENQLYIFADDSVPRWLTA++HIDFDTMAGADKFGNIYFVRLPQDVSDE+E
Sbjct: 965  SFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEVE 1024

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTGGKIKWEQGKLNGAPNK+EEIVQFHVGDVVT LQKASL+PGG              
Sbjct: 1025 EDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGG-------------- 1070

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
                              MHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL L
Sbjct: 1071 ----------------WRMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPL 1114

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            DLQRKIADELDRTPGEILKKLEE+RNKI+
Sbjct: 1115 DLQRKIADELDRTPGEILKKLEEVRNKII 1143


>gi|357147370|ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
            distachyon]
          Length = 1228

 Score = 2103 bits (5450), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 993/1228 (80%), Positives = 1119/1228 (91%), Gaps = 15/1228 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSG----------TKTPEIVVARGKVLELLRPE-NSGRI 49
            MYLYSLTLQ+ TG + A+ G+FSG          + T EI VARG  L+LLRP+  +GR+
Sbjct: 1    MYLYSLTLQRATGAVCAVIGSFSGRDTKKSGAAGSSTQEIAVARGGTLDLLRPDPETGRL 60

Query: 50   ETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKS 109
             TL+S ++FGAIRSLAQFRLTG+ KDY+VVGSDSGR+VILEY+P +N FDK+HQETFGKS
Sbjct: 61   RTLLSVDVFGAIRSLAQFRLTGATKDYLVVGSDSGRLVILEYSPDRNRFDKVHQETFGKS 120

Query: 110  GCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSI 169
            GCRRIVPGQ L VDPKGRA+ I A EKQKLVYVLNRD +ARLTISSPLEAHKSHT+ +++
Sbjct: 121  GCRRIVPGQLLTVDPKGRALCIAALEKQKLVYVLNRDASARLTISSPLEAHKSHTLTFAL 180

Query: 170  CGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDN 229
              +DCGFDNP+F AIEL+Y ++D+D TGQAAS AQK LTFYELDLGLNHVSRK SEP+DN
Sbjct: 181  TALDCGFDNPVFGAIELEYGDSDRDPTGQAASHAQKLLTFYELDLGLNHVSRKVSEPIDN 240

Query: 230  GANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH 289
            GAN+LVTVPGGGDGPSG+LVC +NFV+Y+NQGHP+VRAVIPRR DLPAERGVLIV+AATH
Sbjct: 241  GANLLVTVPGGGDGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRVDLPAERGVLIVAAATH 300

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            RQK+LFFFLLQTEYGDIFKV LEH+ + VSEL+IKYFDTIPV +++CVL+SG+LFAASEF
Sbjct: 301  RQKSLFFFLLQTEYGDIFKVDLEHNGDSVSELRIKYFDTIPVASAICVLRSGFLFAASEF 360

Query: 350  GNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR 409
            GNHALYQF+ IG D DVE+SS+TLMETEEGFQPVFFQPR LKNLVRI+++ESLMPIMDMR
Sbjct: 361  GNHALYQFRDIGRDVDVESSSATLMETEEGFQPVFFQPRALKNLVRIDEIESLMPIMDMR 420

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
            IANLF+EE PQ++T CGRG RS++RILRPGLA+SEMA S LP  P AVWTVKKN+ND FD
Sbjct: 421  IANLFDEETPQVYTACGRGSRSTMRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFD 480

Query: 470  AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG 529
            AYIVVSF N TLVLSIGET+EEVSDS FLDTT SLAVSL+G+DSLMQVHP+GIRHIREDG
Sbjct: 481  AYIVVSFANVTLVLSIGETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDG 540

Query: 530  RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
            R+NEWRTPGK+TI KVGSNRLQVVIALSGGELIYFE+DMTGQL+EVEK +MSGDVACL I
Sbjct: 541  RVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAI 600

Query: 590  ASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGE 649
            A VPEGR+RSRFLAVGSYDNTIRILSLDPDDC+Q LSVQSVSS PESLLFLEVQASVGGE
Sbjct: 601  APVPEGRQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGE 660

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
            DGAD+PA+LFLNAGLQNGVLFRT VDMVTGQLSD+RSRFLGLRPPKLF  +V  R AMLC
Sbjct: 661  DGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAMLC 720

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
            LSSRPWLGYIH+G FLLTPLS +TLE AASFSSDQC EGVV+VAG+ALR+FTIERLGETF
Sbjct: 721  LSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIERLGETF 780

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            NETA+PLRYTPR+FV+ PKKK + +IE+D+GA +AE+REAAK+EC EA+G  ENGNGN D
Sbjct: 781  NETAIPLRYTPRKFVILPKKKYLAVIESDKGAFSAEQREAAKRECLEASGAVENGNGNGD 840

Query: 830  QMENGDDE----NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
            QMENGD +     + + L DEQYGYPKAES+KWVSCIR+LDPRS +TTCLLELQDNEAA 
Sbjct: 841  QMENGDGQEDGAEESNTLPDEQYGYPKAESEKWVSCIRILDPRSRDTTCLLELQDNEAAV 900

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            SICTVNFHDKEHGTLLAVGT KGLQFWPKR++ +G+IHIY+FV+EGKSLELLHKTQVE +
Sbjct: 901  SICTVNFHDKEHGTLLAVGTTKGLQFWPKRSLASGFIHIYKFVDEGKSLELLHKTQVEEV 960

Query: 946  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQES 1005
            PL+LCQFQGRLLAG+G VLRLYDLGK++LLRKCENKLFP TIVSI+TYRDRIYVGD+QES
Sbjct: 961  PLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSIHTYRDRIYVGDMQES 1020

Query: 1006 FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE 1065
            FH+CKYRRDENQLYIFADDSVPRWLTAA+HIDFDTMAGADKFGNIYF RLPQD+SDEIEE
Sbjct: 1021 FHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNIYFARLPQDLSDEIEE 1080

Query: 1066 DPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGA 1125
            DPTGGKIKWEQGKLNGAPNK+EEIVQFHVGDVVT LQKASL+PGGGE +IYGTVMGS+GA
Sbjct: 1081 DPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVGA 1140

Query: 1126 MLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLD 1185
            +LAF+SR+DVDFFSHLEMH+RQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ+P+L  D
Sbjct: 1141 LLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPSLPAD 1200

Query: 1186 LQRKIADELDRTPGEILKKLEEIRNKIV 1213
            +QRKIADELDRTPGEILKKLE+IRNKI+
Sbjct: 1201 MQRKIADELDRTPGEILKKLEDIRNKII 1228


>gi|326497839|dbj|BAJ94782.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1227

 Score = 2102 bits (5446), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 994/1227 (81%), Positives = 1116/1227 (90%), Gaps = 14/1227 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSG----------TKTPEIVVARGKVLELLRPE-NSGRI 49
            MYLYSLTLQ+ TG + A+ G+FSG          + T EI VARG  L+LLRP+  +GR+
Sbjct: 1    MYLYSLTLQRATGAVCAVIGSFSGRDSKKSNAAGSSTQEIAVARGGTLDLLRPDPETGRL 60

Query: 50   ETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKS 109
             TL+S ++FGAIRSLAQFRLTG+ KDY+VVGSDSGR+VILEY+P +N FDK+HQETFGKS
Sbjct: 61   RTLLSVDVFGAIRSLAQFRLTGATKDYLVVGSDSGRLVILEYSPDRNRFDKVHQETFGKS 120

Query: 110  GCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSI 169
            GCRRIVPGQ L+VDPKGRA+ I A EKQKLVYVLNRD +ARLTISSPLEAHKSHT+ +++
Sbjct: 121  GCRRIVPGQLLSVDPKGRALCIAALEKQKLVYVLNRDASARLTISSPLEAHKSHTLTFAL 180

Query: 170  CGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDN 229
              +DCGFDNP+F AIEL+Y ++D+D TGQAAS AQK LTFYELDLGLNHVSRK SEP+DN
Sbjct: 181  TALDCGFDNPVFGAIELEYGDSDRDPTGQAASHAQKLLTFYELDLGLNHVSRKVSEPIDN 240

Query: 230  GANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH 289
            GANMLVTVPGG DGPSG+LVC +NFV+Y+NQGHP+VRAVIPRR DLPAERGVLIV+AATH
Sbjct: 241  GANMLVTVPGGADGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRVDLPAERGVLIVAAATH 300

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            RQK+LFFFLLQTEYGDIFKV L+H  + VSEL+IKYFDTIPV +++CVL+SG+LFAASEF
Sbjct: 301  RQKSLFFFLLQTEYGDIFKVDLDHHGDTVSELRIKYFDTIPVASAICVLRSGFLFAASEF 360

Query: 350  GNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR 409
            GNHALYQF+ IG D DVE+SS+TLMETEEGFQPVFFQPR LKNLVRI+++ESLMPIMDMR
Sbjct: 361  GNHALYQFRDIGRDVDVESSSATLMETEEGFQPVFFQPRALKNLVRIDEIESLMPIMDMR 420

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
            IANLF+EE PQ++T CGRG RS+LRILRPGLA+SEMA S LP  P AVWTVKKN+ND FD
Sbjct: 421  IANLFDEETPQVYTACGRGSRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFD 480

Query: 470  AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG 529
            AYIVVSF N TLVLSIGET+EEVSDS FLDTT SLAVSL+G+DSLMQVHP+GIRHIREDG
Sbjct: 481  AYIVVSFANVTLVLSIGETIEEVSDSHFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDG 540

Query: 530  RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
            R+NEWRTPGK+TI KVGSNRLQVVIALSGGELIYFE+DMTGQL+EVEK +MSGDVACL I
Sbjct: 541  RVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAI 600

Query: 590  ASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGE 649
            A VPEGR+RSRFLAVGSYDNTIRILS DPDDC+Q LSVQSVSS PESLLFLEVQASVGGE
Sbjct: 601  APVPEGRQRSRFLAVGSYDNTIRILSFDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGE 660

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
            DGAD+PA+LFLNAGLQNGVLFRT VDMVTGQLSD+RSRFLGLRPPKLF  +V  R AMLC
Sbjct: 661  DGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAMLC 720

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
            LSSRPWLGYIH+G FLLTPLS +TLE AASFSSDQC EGVV+VAG+ALR+FTIERLGETF
Sbjct: 721  LSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIERLGETF 780

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            NET++PLRYTPR+FV+ PKKK + +IE+D+GA +AE+REAAKKEC EAAG  ENGNGN D
Sbjct: 781  NETSIPLRYTPRKFVILPKKKYLAVIESDKGAFSAEQREAAKKECLEAAGSAENGNGNGD 840

Query: 830  QMENGD---DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFS 886
            QMENGD   D  + + L DEQYGYPKAES+KWVSCIR+LDPRS +TTCLLELQDNEAA S
Sbjct: 841  QMENGDGQEDGEESNTLPDEQYGYPKAESEKWVSCIRILDPRSRDTTCLLELQDNEAAVS 900

Query: 887  ICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIP 946
            ICTVNFHDKEHGTLLAVGT KGLQFWPKR++ +G+IHIY+FV EGKSLELLHKTQVE +P
Sbjct: 901  ICTVNFHDKEHGTLLAVGTTKGLQFWPKRSLASGFIHIYKFVNEGKSLELLHKTQVEEVP 960

Query: 947  LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESF 1006
            L+LCQFQGRLLAG+G VLRLYDLGK++LLRKCENKLFP TIVSI+TYRDRIYVGD+QESF
Sbjct: 961  LSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSIHTYRDRIYVGDMQESF 1020

Query: 1007 HFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEED 1066
            H+CKYRRDENQLYIFADDSVPRWLTAA+HIDFDTMAGADKFGNIYF RLPQD+SDEIEED
Sbjct: 1021 HYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNIYFARLPQDLSDEIEED 1080

Query: 1067 PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAM 1126
            PTGGKIKWEQGKLNGAPNK+EEIVQFHVGDVVT LQKASL+PGGGE +IYGTVMGS+GA+
Sbjct: 1081 PTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVGAL 1140

Query: 1127 LAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDL 1186
            LAF+SR+DVDFFSHLEMH+RQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ+P+L  D+
Sbjct: 1141 LAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPSLPADM 1200

Query: 1187 QRKIADELDRTPGEILKKLEEIRNKIV 1213
            QRKIADELDRTPGEILKKLE+IRNKI+
Sbjct: 1201 QRKIADELDRTPGEILKKLEDIRNKII 1227


>gi|242060436|ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
 gi|241931338|gb|EES04483.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
          Length = 1232

 Score = 2093 bits (5423), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 988/1232 (80%), Positives = 1119/1232 (90%), Gaps = 19/1232 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSG-------------TKTPEIVVARGKVLELLRPE-NS 46
            MYLYSLTLQ+ TG + A+ G+FSG               T EI VARG  L+LLRP+  +
Sbjct: 1    MYLYSLTLQRATGAVCAVIGSFSGRDSKKSAASGSGSGSTQEIAVARGSTLDLLRPDPET 60

Query: 47   GRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETF 106
            GR+ TL+S ++FGAIRSLAQFRLTG+ KDY+VVGSDSGR+VILEY+P +N  DK+HQETF
Sbjct: 61   GRLRTLLSVDVFGAIRSLAQFRLTGANKDYLVVGSDSGRLVILEYSPDRNRLDKVHQETF 120

Query: 107  GKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIV 166
            GKSGCRRIVPGQ LAVDPKGRA+ I A EKQKLVYVLNRD AARLTISSPLEAHKS+T+ 
Sbjct: 121  GKSGCRRIVPGQLLAVDPKGRALCIAALEKQKLVYVLNRDAAARLTISSPLEAHKSNTLT 180

Query: 167  YSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP 226
            +++  +DCGFDNP+FAAIEL+Y+E+D+D TGQAA++AQK LTFYELDLGLNHVSRK SEP
Sbjct: 181  FALAALDCGFDNPVFAAIELEYAESDRDPTGQAANQAQKLLTFYELDLGLNHVSRKVSEP 240

Query: 227  VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSA 286
            +DNGAN+LVTVPGGGDGPSGVLVC +NFV+Y+NQGHP++RAVIPRRADLPAERGVLIV+A
Sbjct: 241  IDNGANLLVTVPGGGDGPSGVLVCCDNFVLYRNQGHPEIRAVIPRRADLPAERGVLIVAA 300

Query: 287  ATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAA 346
            ATH+QK++FFFLLQTEYGDIFKV L+H+ + VSEL+IKYFDTIPVT+++CVL+SG+LFAA
Sbjct: 301  ATHKQKSMFFFLLQTEYGDIFKVDLDHNGDTVSELRIKYFDTIPVTSAVCVLRSGFLFAA 360

Query: 347  SEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIM 406
            SEFGNHALYQF+ IG D DVE+SS+TLMETEEGFQPVFFQPR LKNL+RI+++ESLMP+M
Sbjct: 361  SEFGNHALYQFRDIGRDADVESSSATLMETEEGFQPVFFQPRALKNLMRIDEIESLMPVM 420

Query: 407  DMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
            DMR+ANLF+EE PQ+FT CGRGPRS+LRILRPGLA+SEMA S LP  P AVWTVKKN+ND
Sbjct: 421  DMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNIND 480

Query: 467  EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
             FDAYIVVSF N TLVLSIGET+EEVSDS FLDTT SLAV+L+G+DSLMQVHP+GIRHIR
Sbjct: 481  MFDAYIVVSFTNVTLVLSIGETIEEVSDSQFLDTTHSLAVTLLGEDSLMQVHPNGIRHIR 540

Query: 527  EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVAC 586
            EDGR+NEWRTPGK+TI KVGSNRLQVVIALSGGELIYFE+DMTGQL+EVEK +MSGDVAC
Sbjct: 541  EDGRVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVAC 600

Query: 587  LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
            L IA VPEGR+RSRFLAVGSYDNTIRILSLDPDDC+Q LSVQSVSS PESLLFLEVQAS+
Sbjct: 601  LAIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASI 660

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
            GGEDGAD+PA+LFLNAGLQNGVLFRT VDMVTGQLSD+RSRFLGLRPPKLF  VV  R A
Sbjct: 661  GGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCVVSHRQA 720

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
            MLCLSSRPWLGYIH+G FLLTPLS +TLE A+SFSSDQC EGVV+VAG+ALR+FTIERLG
Sbjct: 721  MLCLSSRPWLGYIHQGHFLLTPLSCDTLESASSFSSDQCSEGVVAVAGDALRIFTIERLG 780

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
            ETFNETA+PLRYTPR+FV+ PKKK + +IE+D+GA +AEEREAAKKEC EA+G  ENGN 
Sbjct: 781  ETFNETAIPLRYTPRKFVILPKKKYIAVIESDKGAFSAEEREAAKKECLEASGAAENGNA 840

Query: 827  NM-DQMENGDDE----NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
            N  D MENGD +     + +   DEQYGYPKAES++WVSCIR+LDPRS +TTCLLELQ+N
Sbjct: 841  NNGDPMENGDGQEDGAEEGNTFPDEQYGYPKAESERWVSCIRILDPRSRDTTCLLELQEN 900

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            EAA SICTVNFHDKEHGTLLAVGTAKGLQFWP+R +  G+IHIY+FV+EG+SLELLHKTQ
Sbjct: 901  EAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPRRTLAGGFIHIYKFVDEGRSLELLHKTQ 960

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            VE +PLALCQFQGRLLAG+G VLRLYDLGK++LLRKCENKLFP TIVSI+TYRDRIYVGD
Sbjct: 961  VEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSIHTYRDRIYVGD 1020

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QESFH+CKYRRDENQLYIFADDSVPRWLTAA HIDFDTMAGADKFGNIYF RLPQD+SD
Sbjct: 1021 MQESFHYCKYRRDENQLYIFADDSVPRWLTAAQHIDFDTMAGADKFGNIYFARLPQDISD 1080

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            EIEEDPTGGKIKWEQGKLNGAPNK+EEIVQFHVGDVVT LQKASL+PGGGE +IYGTVMG
Sbjct: 1081 EIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMG 1140

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            S+GA+LAF+SR+DVDFFSHLEMH+RQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ+P+
Sbjct: 1141 SVGALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPS 1200

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            L  D+QRKIADELDRTPGEILKKLE+IRNKI+
Sbjct: 1201 LPADMQRKIADELDRTPGEILKKLEDIRNKII 1232


>gi|413935524|gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]
          Length = 1229

 Score = 2092 bits (5420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 984/1229 (80%), Positives = 1119/1229 (91%), Gaps = 16/1229 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGT-----------KTPEIVVARGKVLELLRPE-NSGR 48
            MYLYSLTLQ+ TG + A+ G+FSG             T EI VARG  L+LLRP+  +GR
Sbjct: 1    MYLYSLTLQRATGAVCAVIGSFSGRDSKKSAASGSGSTQEIAVARGSTLDLLRPDPETGR 60

Query: 49   IETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGK 108
            + TL+S ++FGAIRSLAQFRLTG+ KDY+VVGSDSGR+VILEY+P +N  DK+HQETFGK
Sbjct: 61   LRTLLSVDVFGAIRSLAQFRLTGANKDYLVVGSDSGRLVILEYSPDRNRLDKVHQETFGK 120

Query: 109  SGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYS 168
            SGCRRIVPGQ LAVDPKGRA+ I A EKQKLVYVLNRD AARLTISSPLEAHKS+T+ ++
Sbjct: 121  SGCRRIVPGQLLAVDPKGRALCIAALEKQKLVYVLNRDAAARLTISSPLEAHKSNTLTFA 180

Query: 169  ICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVD 228
            +  +DCGFDNP+FAAIEL+Y+E+D+D TGQAA++AQK LTFYELDLGLNHVSRK SEP+D
Sbjct: 181  LAALDCGFDNPVFAAIELEYAESDRDPTGQAANQAQKLLTFYELDLGLNHVSRKVSEPID 240

Query: 229  NGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAT 288
            NGAN+LVTVPGGGDGPSGVLVC +NFV+Y+NQGHP++RAVIPRRADLPAERGVLIV+AAT
Sbjct: 241  NGANLLVTVPGGGDGPSGVLVCCDNFVLYRNQGHPEIRAVIPRRADLPAERGVLIVAAAT 300

Query: 289  HRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
            H+QK++FFFLLQTEYGDIFKV L+H+ + VSEL+IKYFDTIPVT+++CVL+SG+LFAASE
Sbjct: 301  HKQKSMFFFLLQTEYGDIFKVDLDHNGDAVSELRIKYFDTIPVTSAVCVLRSGFLFAASE 360

Query: 349  FGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            FGNHALYQF+ IG + DVE+SS+TLMETEEGFQPVFFQPR LKNL+RI+++ESLMP+MDM
Sbjct: 361  FGNHALYQFRDIGREADVESSSATLMETEEGFQPVFFQPRALKNLMRIDEIESLMPVMDM 420

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            R+ANLF+EE PQ+FT CGRGPRS+LRILRPGLA+SEMA S LP  P AVWTVKKN+ND F
Sbjct: 421  RVANLFDEETPQLFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMF 480

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYIVVSF N TLVLSIGET+EEVSDS FLDTT SLAV+L+G+DSLMQVHP+GIRHIRED
Sbjct: 481  DAYIVVSFTNVTLVLSIGETIEEVSDSQFLDTTHSLAVTLLGEDSLMQVHPNGIRHIRED 540

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
            GR+NEWRTPGK+TI KVGSNRLQVVIALSGGELIYFE+DMTGQL+EVEK +MSGDVACL 
Sbjct: 541  GRVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLA 600

Query: 589  IASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGG 648
            IA VPEGR+RSRFLAVGSYDNTIRILSLDPDDC+Q LSVQSVSS PESLLFLEVQASVGG
Sbjct: 601  IAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGG 660

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
            EDGAD+PA+LFLNAGLQNGVLFRT VDMVTGQLSD+RSRFLGLRPPKLF  +V  R AML
Sbjct: 661  EDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAML 720

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
            CLSSRPWLGYIH+G FLLTPLS +TLE AASFSSDQC EGVV+VAG+ALR+FTIERLGET
Sbjct: 721  CLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIERLGET 780

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
            FNETA+PLRYTPR+FV+ PKKK + +IE+D+GA +AEEREAAKKEC +A+G  ENGN N 
Sbjct: 781  FNETAIPLRYTPRKFVILPKKKYIAVIESDKGAFSAEEREAAKKECLDASGAAENGNANN 840

Query: 829  -DQMENGDDEN---KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
             D MENGD ++   + +   DEQYGYPKAES++WVSCIR+LDPRS +TTCLLELQDNEAA
Sbjct: 841  GDPMENGDGQDGAEEGNTFPDEQYGYPKAESERWVSCIRILDPRSRDTTCLLELQDNEAA 900

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             SICTVNFHDKEHGTLLA+GTAKGLQFWP+R +  G+IH+Y+FV+EG+SLELLHKTQVE 
Sbjct: 901  VSICTVNFHDKEHGTLLAIGTAKGLQFWPRRTLAGGFIHVYKFVDEGRSLELLHKTQVEE 960

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +PLALCQFQGRLLAG+G VLRLYDLGK++LLRKCENKLFP T+VSI+TYRDRIYVGD+QE
Sbjct: 961  VPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTLVSIHTYRDRIYVGDMQE 1020

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SFH+CKYRRDENQLYIFADDSVPRWLT A HIDFDTMAGADKFGNIYF RLPQD+SDEIE
Sbjct: 1021 SFHYCKYRRDENQLYIFADDSVPRWLTTAQHIDFDTMAGADKFGNIYFARLPQDISDEIE 1080

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTGGKIKWEQGKLNGAPNK+EEIVQFHVGDVVT LQKASL+PGGGE +IYGTVMGS+G
Sbjct: 1081 EDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVG 1140

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
            A+LAF+SR+DVDFFSHLEMH+RQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ+P+L  
Sbjct: 1141 ALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPSLPA 1200

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            D+QRKIADELDRTPGEILKKLE+IRNKI+
Sbjct: 1201 DMQRKIADELDRTPGEILKKLEDIRNKII 1229


>gi|168046759|ref|XP_001775840.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672847|gb|EDQ59379.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1214

 Score = 2090 bits (5415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 992/1217 (81%), Positives = 1124/1217 (92%), Gaps = 7/1217 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LY+LTLQ  TGI+ A  GNF+G K+ EIVVARGKVL+LLRP+++G+++TL+S EIFGA
Sbjct: 1    MFLYNLTLQPATGIVCATYGNFTGGKSQEIVVARGKVLDLLRPDDNGKLQTLLSVEIFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN  KN+F+K+HQETFGKSGCRRIVPGQYL
Sbjct: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNIFEKVHQETFGKSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRAVMIGACEKQKLVYVLNRD AARLTISSPLEAHKSHTIVYSI G+DCGFDNPI
Sbjct: 121  AVDPKGRAVMIGACEKQKLVYVLNRDNAARLTISSPLEAHKSHTIVYSITGVDCGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQDSTGQAA+EAQK+LTFYELDLGLNHV RKW+EP+DNGANMLVTVPGG
Sbjct: 181  FAAIELDYSEADQDSTGQAANEAQKHLTFYELDLGLNHVVRKWTEPIDNGANMLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGPSGVLVCAENFVIYKNQ  PD+RAVIPRR DLP  RGVLIVSAATH+QK LFFFLLQ
Sbjct: 241  GDGPSGVLVCAENFVIYKNQNQPDIRAVIPRRQDLPPNRGVLIVSAATHKQKALFFFLLQ 300

Query: 301  TEYGDIFKVTLEHD-NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            TEYGDIFKVTL++D ++ V+ELKIKYFDTIPVT++MCVLKSG+LFAASEFGNH+LYQFQ+
Sbjct: 301  TEYGDIFKVTLDYDKDDQVTELKIKYFDTIPVTSAMCVLKSGFLFAASEFGNHSLYQFQS 360

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            IG +P+VE+SSSTL+ETEEG+QP+FFQPR LKNLV+I+ +ESLMPIMDM++AN+FEEE P
Sbjct: 361  IGEEPEVESSSSTLVETEEGYQPIFFQPRKLKNLVQIDDIESLMPIMDMKVANIFEEETP 420

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QIF+LCGRGPRSSLRILRPGLAV+EMAVS LPGVPSAVWTVKK+ NDEFDAYIVVSF NA
Sbjct: 421  QIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAYIVVSFVNA 480

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
            TLVLSIGETVEEVSDSGFLDTTPSLA+SL+GDDSLMQVHPSGIRHIR DGRINEW+TPGK
Sbjct: 481  TLVLSIGETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRADGRINEWKTPGK 540

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            +TIVKVG NR+QVVIALSGGELIYFE+DM+GQL+E+EK +M+GDVACL IA VPEGR+RS
Sbjct: 541  KTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLHIAPVPEGRQRS 600

Query: 600  RFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
            RFLAVGSYD+TIRILSLDPDDCMQILSVQ+VSSPPESLL LEVQAS GGEDGADHPAS+F
Sbjct: 601  RFLAVGSYDSTIRILSLDPDDCMQILSVQAVSSPPESLLLLEVQASTGGEDGADHPASVF 660

Query: 660  LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYI 719
            LNAGLQNGVL RT VDMVTGQLSD+R+RFLGLR PKLFS  V GR AMLCLSSRPWLGYI
Sbjct: 661  LNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSARVRGRRAMLCLSSRPWLGYI 720

Query: 720  HRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYT 779
            H+G FLLTPLSYETLEYAASFSSDQC EGVV+VAG+ALRVFTIERLGETFN+T +PLRYT
Sbjct: 721  HQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNQTVVPLRYT 780

Query: 780  PRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGM--GENGNGNMDQMENGDDE 837
            PR+F+L PK+K ++I+E+D GA + EEREA KKE  +A G    E  NG  ++M +G++E
Sbjct: 781  PRKFILHPKQKSLIILESDLGAFSTEEREANKKEAVKATGGRDDEKANGEDEEMADGENE 840

Query: 838  NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD-KE 896
               DPL DEQYGYPKAES+KW SCIRVLDP+++ TTCLLELQ+NEAAFS+C VNFHD KE
Sbjct: 841  ---DPLPDEQYGYPKAESNKWASCIRVLDPKTSTTTCLLELQENEAAFSLCAVNFHDNKE 897

Query: 897  HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRL 956
             GTL+AVGTAK +QF PK+    G+IHIYRFVEEG+ LEL+HKT V+G+P ALCQFQGRL
Sbjct: 898  LGTLIAVGTAKNMQFMPKKESSGGFIHIYRFVEEGRILELVHKTPVDGVPTALCQFQGRL 957

Query: 957  LAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN 1016
            L G+G VLR+YDLGK++LLRKCENK FPNTI++I+TY DRIYVGDIQESFH+ KYRRDEN
Sbjct: 958  LVGVGQVLRIYDLGKRKLLRKCENKNFPNTIIAIHTYGDRIYVGDIQESFHYVKYRRDEN 1017

Query: 1017 QLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ 1076
            QLY FADDS PRWLTA+ HIDFDTMAGADKFGN+Y +RLPQDVS+EIE+DPTGGKIKWEQ
Sbjct: 1018 QLYTFADDSCPRWLTASLHIDFDTMAGADKFGNVYVMRLPQDVSEEIEDDPTGGKIKWEQ 1077

Query: 1077 GKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
            G+LNGAPNK+EEI+QFHVG+VVTSLQKASL+PGGGESV+YGT+MGS+GA+L FSSR+DVD
Sbjct: 1078 GRLNGAPNKVEEIIQFHVGEVVTSLQKASLIPGGGESVLYGTIMGSVGALLPFSSREDVD 1137

Query: 1137 FFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
            FFSHLEMH+RQE+PPLCGRDHMA+RSAYFPVKDVIDGDLCEQ+P L+ +LQRKIAD+LDR
Sbjct: 1138 FFSHLEMHLRQENPPLCGRDHMAFRSAYFPVKDVIDGDLCEQYPMLTSELQRKIADDLDR 1197

Query: 1197 TPGEILKKLEEIRNKIV 1213
            TPGE+LKKLE+IRN+I+
Sbjct: 1198 TPGEVLKKLEDIRNRII 1214


>gi|125580741|gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
          Length = 1224

 Score = 2083 bits (5397), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 991/1234 (80%), Positives = 1114/1234 (90%), Gaps = 31/1234 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSG---------------TKTPEIVVARGKVLELLRPE- 44
            MYLYSLTLQ+ TG + A+ G+FSG               + T EI VARG  LELLRP+ 
Sbjct: 1    MYLYSLTLQRATGAVCAVIGSFSGRDSKKSAASGSSSSSSSTQEIAVARGTTLELLRPDP 60

Query: 45   NSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQE 104
             +GR+ TL+S +          FRLTG+ KDY+VVGSDSGR+VILEY+P +N  DK+HQE
Sbjct: 61   ETGRLRTLLSVD----------FRLTGATKDYLVVGSDSGRLVILEYSPDRNRLDKVHQE 110

Query: 105  TFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHT 164
            TFGKSGCRRIVPGQ LAVDPKGRA+ I A EKQKLVYVLNRD AARLTISSPLEAHKS+T
Sbjct: 111  TFGKSGCRRIVPGQLLAVDPKGRALCIAALEKQKLVYVLNRDAAARLTISSPLEAHKSNT 170

Query: 165  IVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS 224
            + +S+  +DCGFDNP+FAAIEL+Y+E+D+D TGQAA +AQK+LTFYELDLGLNHVSRK S
Sbjct: 171  LTFSLTALDCGFDNPVFAAIELEYAESDRDPTGQAAEQAQKHLTFYELDLGLNHVSRKAS 230

Query: 225  EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIV 284
            EP+DNGAN+LVTVPGGGDGPSG+LVC +NFV+Y+NQGHP+VRAVIPRRADLPAERGVLIV
Sbjct: 231  EPIDNGANLLVTVPGGGDGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRADLPAERGVLIV 290

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
            +AATHRQK+LFFFLLQTEYGDIFKV LEH N+ V+EL+IKYFDTIPVT+++CVL+SG+LF
Sbjct: 291  AAATHRQKSLFFFLLQTEYGDIFKVDLEHSNDTVTELRIKYFDTIPVTSAICVLRSGFLF 350

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            AASEFGNHALYQF+ IG D DVE+SS+TLMET+EGFQPVFFQPR LKNL RI+++ESLMP
Sbjct: 351  AASEFGNHALYQFRDIGRDVDVESSSATLMETDEGFQPVFFQPRALKNLYRIDEIESLMP 410

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            IMDMR+ANLF+EE PQ+FT CGRGPRS+LRILRPGLA+SEMA S LP  P AVWTVKKN+
Sbjct: 411  IMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNI 470

Query: 465  NDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
            ND FDAYIVVSF N TLVLSIGET+EEVSDS FLDTT SLAVSL+G+DSLMQVHP+GIRH
Sbjct: 471  NDMFDAYIVVSFANVTLVLSIGETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRH 530

Query: 525  IREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV 584
            IREDGR+NEWRTPGK+TI KVGSNRLQVVIALSGGELIYFE+DMTGQL+EVEK +MSGDV
Sbjct: 531  IREDGRVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDV 590

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
            ACL IA VPEGR+RSRFLAVGS+DNTIRILS+DPDDC+Q LSVQSVSS PESL+FLEVQA
Sbjct: 591  ACLAIAPVPEGRQRSRFLAVGSFDNTIRILSVDPDDCLQPLSVQSVSSAPESLMFLEVQA 650

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            SVGGEDGADHPA+LFLNAGLQNGVLFRT VDMVTGQLSD+RSRFLGLRPPKLF  +V  R
Sbjct: 651  SVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHR 710

Query: 705  AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
             AMLCLSSRPWLGYIH+G FLLTPLS +TLE AASFSSDQC EGVV+VAG+ALR+FTIE 
Sbjct: 711  QAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIEH 770

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
            LGETFNETA+PLRYTPR+FV+ PKKK + +IE+D+GAL+AEEREAAKKEC EAAG+ ENG
Sbjct: 771  LGETFNETAIPLRYTPRKFVILPKKKYLAVIESDKGALSAEEREAAKKECLEAAGVTENG 830

Query: 825  NGNM-DQMENGDDE----NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
            N N  DQMENGD +       + L DEQYGYPKAES++WVSCIR+LDP+S +TTCLLELQ
Sbjct: 831  NANNGDQMENGDGQEDGAEDRNTLPDEQYGYPKAESERWVSCIRILDPKSRDTTCLLELQ 890

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            DNEAA SICTVNFHDKEHGTLLAVGTAKGLQFWPKRN+ AG+IHIY+FV+EG+SLELLHK
Sbjct: 891  DNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNLSAGFIHIYKFVDEGRSLELLHK 950

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            TQVE +PLALCQFQGRLLAG+G VLRLYDLGK++LLRKCENKLFP TIVSI+TYRDRIYV
Sbjct: 951  TQVEEVPLALCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSIHTYRDRIYV 1010

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+QESFH+CKYRRDENQLYIFADDSVPRWLTAA+HIDFDTMAGADKFGNIYF RLPQD+
Sbjct: 1011 GDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNIYFARLPQDL 1070

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            SDEIEEDPTGGKIKWEQGKLNGAPNK+EEIVQFHVGDVVT LQKASL+PGGGE +IYGTV
Sbjct: 1071 SDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTV 1130

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            MGS+GA+LAF+SR+DVDFFSHLEMH+RQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF
Sbjct: 1131 MGSVGALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1190

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            P+L  D+QRKIADELDRTPGEILKKLE+IRNKI+
Sbjct: 1191 PSLPADMQRKIADELDRTPGEILKKLEDIRNKII 1224


>gi|168045572|ref|XP_001775251.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673464|gb|EDQ59987.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1201

 Score = 2080 bits (5388), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 980/1215 (80%), Positives = 1112/1215 (91%), Gaps = 16/1215 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLYSLTLQ  TGI+ A  GNF+G KT EIVVARGKVL+LLRP+++G+++T++S EIFGA
Sbjct: 1    MYLYSLTLQSATGIVCATYGNFTGGKTQEIVVARGKVLDLLRPDDNGKLQTMLSVEIFGA 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            I              YIVVGSDSGRIVILEYN  KN+F+K+HQETFGKSGCRRIVPGQYL
Sbjct: 61   IH-------------YIVVGSDSGRIVILEYNKEKNLFEKVHQETFGKSGCRRIVPGQYL 107

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRAVMI ACEKQKLVYVLNRD AARLTISSPLEAHKSHTIVYSI G+DCGFDNPI
Sbjct: 108  AVDPKGRAVMISACEKQKLVYVLNRDNAARLTISSPLEAHKSHTIVYSITGVDCGFDNPI 167

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQD TGQAA+EAQK+LTFYELDLGLNHV RKW+EP+DNGANMLVTVPGG
Sbjct: 168  FAAIELDYSEADQDPTGQAANEAQKHLTFYELDLGLNHVVRKWTEPIDNGANMLVTVPGG 227

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGPSGVLVCAENFVIYKNQ HPD+RAVIPRR DLP  RGVLIVSAATH+QK LFFFLLQ
Sbjct: 228  GDGPSGVLVCAENFVIYKNQNHPDIRAVIPRRQDLPPNRGVLIVSAATHKQKALFFFLLQ 287

Query: 301  TEYGDIFKVTLEHD-NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            TEYGDIFKVTL++D ++ V+ELK+KYFDTIPVT++MCVLKSG+LFAASEFGNH+LYQFQ+
Sbjct: 288  TEYGDIFKVTLDYDKDDQVTELKVKYFDTIPVTSAMCVLKSGFLFAASEFGNHSLYQFQS 347

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            IG DP+VE+SSSTL+ETEEG+QPVFFQPR LKNLV+I+ +ESLMPIMDM++AN+FEEE P
Sbjct: 348  IGDDPEVESSSSTLVETEEGYQPVFFQPRKLKNLVQIDDIESLMPIMDMKVANIFEEETP 407

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QIF+LCGRGPRSSLRILRPGLAV+EMAVS LPGVPSAVWTVKK+ NDEFDAYIVVSF NA
Sbjct: 408  QIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAYIVVSFVNA 467

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
            TLVLSIGETVEEVSDSGFLDTTPSLA+SL+GDDSLMQVHPSGIRHIR DGRINEW+TPGK
Sbjct: 468  TLVLSIGETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRSDGRINEWKTPGK 527

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            +TIVKVG NR+QVVIALSGGELIYFE+DM+GQL+E+EK +M+GDVACLDIA VPEGR+RS
Sbjct: 528  KTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLDIAPVPEGRQRS 587

Query: 600  RFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
            RFLAVGSYD+TIRILSLDPDDCMQILSVQ+VSSPPESLL LEVQAS GGEDGADHPAS+F
Sbjct: 588  RFLAVGSYDSTIRILSLDPDDCMQILSVQAVSSPPESLLLLEVQASTGGEDGADHPASVF 647

Query: 660  LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYI 719
            LNAGLQNGVL RT VDMVTGQLSD+R+RFLGLR PKLFS +V GR AMLCLSSRPWLGYI
Sbjct: 648  LNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSALVRGRRAMLCLSSRPWLGYI 707

Query: 720  HRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYT 779
            H+G FLLTPLSYETLEYAASFSSDQC EGVV+VAG+ALRVFTIERLGETFN+T +PLRYT
Sbjct: 708  HQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNQTVVPLRYT 767

Query: 780  PRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENK 839
            PR+F+L PK+K ++I+E+D+GA + EEREA KKE  EA G  ENG  + +  E  D+E++
Sbjct: 768  PRKFILHPKQKTLIILESDEGAFSTEEREANKKEAVEATGGHENGKADGEDEEMADEESE 827

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD-KEHG 898
             DPL DEQYGYPKAE++KWVSCIRVLDP+++ TTCLLELQ+NEAAFSICTVNFHD KE G
Sbjct: 828  -DPLPDEQYGYPKAEANKWVSCIRVLDPKTSTTTCLLELQENEAAFSICTVNFHDNKELG 886

Query: 899  TLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLA 958
            TL+AVGTAK LQF P++    G+IHIYRF EEG+ LEL+HKT V+G+P ALCQFQGRLL 
Sbjct: 887  TLIAVGTAKDLQFMPRKEASGGFIHIYRFAEEGRVLELVHKTPVDGVPTALCQFQGRLLV 946

Query: 959  GIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQL 1018
            G+G VLR+YDLGK++LLRKCENK FPNTI++I+TY DRIYVGDIQESFH+ KYRRDENQL
Sbjct: 947  GVGQVLRIYDLGKRKLLRKCENKNFPNTIIAIHTYGDRIYVGDIQESFHYVKYRRDENQL 1006

Query: 1019 YIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGK 1078
            Y FADDS PRWLTA+ HIDFDTMAGADKFGN+Y +RLPQDVS+EIE+DPTGGKIKWEQG+
Sbjct: 1007 YTFADDSCPRWLTASLHIDFDTMAGADKFGNVYVMRLPQDVSEEIEDDPTGGKIKWEQGR 1066

Query: 1079 LNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFF 1138
            LNGAPNK++EI+QFHVG+VVTSLQKASL+PGGGES++YGTVMGS+GA+L FSSR+DVDFF
Sbjct: 1067 LNGAPNKVDEIIQFHVGEVVTSLQKASLIPGGGESMLYGTVMGSMGALLPFSSREDVDFF 1126

Query: 1139 SHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTP 1198
            SHLEMH+RQE+PPLCGRDHMA+RSAYFPVKDVIDGDLCEQ+  L+ +LQ+KIAD+LDRTP
Sbjct: 1127 SHLEMHLRQENPPLCGRDHMAFRSAYFPVKDVIDGDLCEQYSMLTSELQKKIADDLDRTP 1186

Query: 1199 GEILKKLEEIRNKIV 1213
            GEI+KKLE+IRN+I+
Sbjct: 1187 GEIVKKLEDIRNRII 1201


>gi|302807210|ref|XP_002985318.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
 gi|300147146|gb|EFJ13812.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
          Length = 1207

 Score = 2016 bits (5224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 954/1216 (78%), Positives = 1093/1216 (89%), Gaps = 12/1216 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LYSLTLQ+ TGI+ A  GNF G K+ EIV+ RGK+LELLRP+++G+++TL++ EIFG 
Sbjct: 1    MFLYSLTLQRATGIVCACYGNFIGGKSQEIVIGRGKILELLRPDDNGKLQTLLAVEIFGV 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +RSLAQFRLTGS KDY+VVGSDSG+IVILEYN  +N FD +H+ETFGKSGCRRIVPGQ+L
Sbjct: 61   VRSLAQFRLTGSHKDYLVVGSDSGKIVILEYNRDRNAFDPVHKETFGKSGCRRIVPGQFL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            +VDPKGRAVMI A EKQKLVYVLNRD AARLTISSPLEAHKSHT+VYS+ G+DCGF+NP+
Sbjct: 121  SVDPKGRAVMIAATEKQKLVYVLNRDNAARLTISSPLEAHKSHTVVYSLVGVDCGFENPM 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYS+ADQD+TGQAA EAQK+LTFYELDLGLNHV RKWSEP+DNGANMLVTVPGG
Sbjct: 181  FAAIELDYSDADQDATGQAALEAQKHLTFYELDLGLNHVVRKWSEPIDNGANMLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGPSGVLVCA+NFVIYKNQ   ++RA+IPRRADLPA+RGVL+VSAATHRQK++FFFLLQ
Sbjct: 241  ADGPSGVLVCADNFVIYKNQSQ-ELRALIPRRADLPADRGVLVVSAATHRQKSVFFFLLQ 299

Query: 301  TEYGDIFKVTLEHDNEH--VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            TEYGD+FKVTL  ++    V+ELKIKYFDT PVT++MCVLKSG+LFAASEFGNHALYQFQ
Sbjct: 300  TEYGDVFKVTLSFNDTDMVVTELKIKYFDTFPVTSAMCVLKSGFLFAASEFGNHALYQFQ 359

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
             IG DPDVE+SS+TL ETE+GF+P+FFQPR LKNL++I++ ESLMPIMDM+IANLFEEE 
Sbjct: 360  GIGDDPDVESSSATLEETEDGFKPIFFQPRKLKNLIQIDEGESLMPIMDMKIANLFEEET 419

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNN 478
            PQIF  CGRGPRS+LRILRPGLAVSEMAVSQLPGVPSAVWTVKK+V DEFDAYIVVSF N
Sbjct: 420  PQIFVACGRGPRSTLRILRPGLAVSEMAVSQLPGVPSAVWTVKKSVTDEFDAYIVVSFLN 479

Query: 479  ATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPG 538
            ATLVLSIGETVEEVSDSGFLDTTPSL VSL+GDDSLMQV+P+GIRHIR   RINEW+TPG
Sbjct: 480  ATLVLSIGETVEEVSDSGFLDTTPSLQVSLLGDDSLMQVYPNGIRHIRSLVRINEWKTPG 539

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
            K+TIVKVGSNR+QVVI LSGGELIYFE+D TGQL+E+EK EMSGDVACL I  VPEGR+R
Sbjct: 540  KKTIVKVGSNRMQVVIGLSGGELIYFEMDPTGQLMEIEKREMSGDVACLAIGPVPEGRQR 599

Query: 599  SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
            SRFLAVGSYDNTIRILSLDP+DCM ILSVQ V+SPPESLL LEVQAS GGEDGA +PAS+
Sbjct: 600  SRFLAVGSYDNTIRILSLDPNDCMHILSVQMVASPPESLLLLEVQASTGGEDGAVYPASV 659

Query: 659  FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGY 718
            FLNAGLQNGVL RT VDMVTGQLS +R+RFLGLR PKLF+  V GR A+LCLSSRPWLGY
Sbjct: 660  FLNAGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRAPKLFATSVRGRQALLCLSSRPWLGY 719

Query: 719  IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRY 778
            IH+G FLLTPLSYETLEYAASFSSDQC EGVV+VAG ALRVFTIERLGETFN+T++ LRY
Sbjct: 720  IHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGEALRVFTIERLGETFNQTSIQLRY 779

Query: 779  TPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDEN 838
            TPR+F+L PK+K +V+IETDQG  T EERE   +    +A   +NG   +D  E  ++E 
Sbjct: 780  TPRKFILHPKRKFLVLIETDQGTFTTEEREHMSR----SAAAQDNGMMEIDNQEKSEEE- 834

Query: 839  KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD-KEH 897
               P+ DEQYGYPK +S +WVSCIRVLDP++A TTCLLELQ+NEAAFSIC VNFHD K  
Sbjct: 835  ---PMPDEQYGYPKTDSRRWVSCIRVLDPKAAATTCLLELQENEAAFSICCVNFHDNKNL 891

Query: 898  GTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLL 957
            GT+LAVGTAK L++WPKR  + G+IHIYRFVE+G+SLEL+HKT ++G+P ALCQFQGRLL
Sbjct: 892  GTVLAVGTAKDLEWWPKRRSMGGFIHIYRFVEDGRSLELVHKTPIDGVPTALCQFQGRLL 951

Query: 958  AGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQ 1017
            AGIG +LR+YDLGK++LLRKCENK FPNTI SI++Y DRIYVGDIQESFH+ KYRRDENQ
Sbjct: 952  AGIGQILRIYDLGKRKLLRKCENKNFPNTITSIHSYGDRIYVGDIQESFHYVKYRRDENQ 1011

Query: 1018 LYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQG 1077
            LY FADDS PRWLTA+ HIDFDTMA  DKFGN++FVRLPQD+S+EIE+DPTGGKIKWEQG
Sbjct: 1012 LYAFADDSSPRWLTASLHIDFDTMAAGDKFGNLFFVRLPQDLSEEIEDDPTGGKIKWEQG 1071

Query: 1078 KLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDF 1137
            +LNGAPNK+EEI+QFHVG+VVT +QKASL+PGGGESVIYGTVMGS+GA+L FSSR+DVDF
Sbjct: 1072 RLNGAPNKVEEIIQFHVGEVVTCMQKASLIPGGGESVIYGTVMGSVGALLPFSSREDVDF 1131

Query: 1138 FSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            FSHLEMHMRQEHPPLCGRDHMA+RSAYFPVKDVIDGDLCEQ+PTL  DLQRKIA+ELDRT
Sbjct: 1132 FSHLEMHMRQEHPPLCGRDHMAFRSAYFPVKDVIDGDLCEQYPTLPPDLQRKIAEELDRT 1191

Query: 1198 PGEILKKLEEIRNKIV 1213
            PGE++KKLE+IRN+I+
Sbjct: 1192 PGEVMKKLEDIRNRII 1207


>gi|302773427|ref|XP_002970131.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
 gi|300162642|gb|EFJ29255.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
          Length = 1207

 Score = 2015 bits (5221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 953/1216 (78%), Positives = 1093/1216 (89%), Gaps = 12/1216 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LYSLTLQ+ TGI+ A  GNF G K+ EIV+ RGK+LELLRP+++G+++TL++ EIFG 
Sbjct: 1    MFLYSLTLQRATGIVCACYGNFIGGKSQEIVIGRGKILELLRPDDNGKLQTLLAVEIFGV 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +RSLAQFRLTGS KDY+VVGSDSG+IVILEYN  +N FD +H+ETFGKSGCRRIVPGQ+L
Sbjct: 61   VRSLAQFRLTGSHKDYLVVGSDSGKIVILEYNRDRNAFDPVHKETFGKSGCRRIVPGQFL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            +VDPKGRAVMI A EKQKLVYVLNRD AARLTISSPLEAHKSHT+VYS+ G+DCGF+NP+
Sbjct: 121  SVDPKGRAVMIAATEKQKLVYVLNRDNAARLTISSPLEAHKSHTVVYSLVGVDCGFENPM 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYS+ADQD+TGQAA EAQK+LTFYELDLGLNHV RKWSEP+DNGANMLVTVPGG
Sbjct: 181  FAAIELDYSDADQDATGQAALEAQKHLTFYELDLGLNHVVRKWSEPIDNGANMLVTVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGPSGVLVCA+NFVIYKNQ   ++RA+IPRRADLPA+RGVL+VSA+THRQK++FFFLLQ
Sbjct: 241  ADGPSGVLVCADNFVIYKNQSQ-ELRALIPRRADLPADRGVLVVSASTHRQKSVFFFLLQ 299

Query: 301  TEYGDIFKVTLEHDNEH--VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            TEYGD+FKVTL  ++    V+ELKIKYFDT PVT++MCVLKSG+LFAASEFGNHALYQFQ
Sbjct: 300  TEYGDVFKVTLSFNDTDMVVTELKIKYFDTFPVTSAMCVLKSGFLFAASEFGNHALYQFQ 359

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
             IG DPDVE+SS+TL ETE+GF+P+FFQPR LKNL++I++ ESLMPIMDM+IANLFEEE 
Sbjct: 360  GIGDDPDVESSSATLEETEDGFKPIFFQPRKLKNLIQIDEGESLMPIMDMKIANLFEEET 419

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNN 478
            PQIF  CGRGPRS+LRILRPGLAVSEMAVSQLPGVPSAVWTVKK+V DEFDAYIVVSF N
Sbjct: 420  PQIFVACGRGPRSTLRILRPGLAVSEMAVSQLPGVPSAVWTVKKSVTDEFDAYIVVSFLN 479

Query: 479  ATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPG 538
            ATLVLSIGETVEEVSDSGFLDTTPSL VSL+GDDSLMQV+P+GIRHIR   RINEW+TPG
Sbjct: 480  ATLVLSIGETVEEVSDSGFLDTTPSLQVSLLGDDSLMQVYPNGIRHIRSLVRINEWKTPG 539

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
            K+TIVKVGSNR+QVVI LSGGELIYFE+D TGQL+E+EK EMSGDVACL I  VPEGR+R
Sbjct: 540  KKTIVKVGSNRMQVVIGLSGGELIYFEMDPTGQLMEIEKREMSGDVACLAIGPVPEGRQR 599

Query: 599  SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
            SRFLAVGSYDNTIRILSLDP+DCM ILSVQ V+SPPESLL LEVQAS GGEDGA +PAS+
Sbjct: 600  SRFLAVGSYDNTIRILSLDPNDCMHILSVQMVASPPESLLLLEVQASTGGEDGAVYPASV 659

Query: 659  FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGY 718
            FLNAGLQNGVL RT VDMVTGQLS +R+RFLGLR PKLF+  V GR A+LCLSSRPWLGY
Sbjct: 660  FLNAGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRAPKLFATSVRGRQALLCLSSRPWLGY 719

Query: 719  IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRY 778
            IH+G FLLTPLSYETLEYAASFSSDQC EGVV+VAG ALRVFTIERLGETFN+T++ LRY
Sbjct: 720  IHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGEALRVFTIERLGETFNQTSIQLRY 779

Query: 779  TPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDEN 838
            TPR+F+L PK+K +V+IETDQG  T EERE   +    +A   +NG   +D  E  ++E 
Sbjct: 780  TPRKFILHPKRKFLVLIETDQGTFTTEEREHMSR----SAAAQDNGMMEIDNQEKSEEE- 834

Query: 839  KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD-KEH 897
               P+ DEQYGYPK +S +WVSCIRVLDP++A TTCLLELQ+NEAAFSIC VNFHD K  
Sbjct: 835  ---PMPDEQYGYPKTDSRRWVSCIRVLDPKAAATTCLLELQENEAAFSICCVNFHDNKNL 891

Query: 898  GTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLL 957
            GT+LAVGTAK L++WPKR  + G+IHIYRFVE+G+SLEL+HKT ++G+P ALCQFQGRLL
Sbjct: 892  GTVLAVGTAKDLEWWPKRRSMGGFIHIYRFVEDGRSLELVHKTPIDGVPTALCQFQGRLL 951

Query: 958  AGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQ 1017
            AGIG +LR+YDLGK++LLRKCENK FPNTI SI++Y DRIYVGDIQESFH+ KYRRDENQ
Sbjct: 952  AGIGQILRIYDLGKRKLLRKCENKNFPNTITSIHSYGDRIYVGDIQESFHYVKYRRDENQ 1011

Query: 1018 LYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQG 1077
            LY FADDS PRWLTA+ HIDFDTMA  DKFGN++FVRLPQD+S+EIE+DPTGGKIKWEQG
Sbjct: 1012 LYAFADDSSPRWLTASLHIDFDTMAAGDKFGNLFFVRLPQDLSEEIEDDPTGGKIKWEQG 1071

Query: 1078 KLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDF 1137
            +LNGAPNK+EEI+QFHVG+VVT +QKASL+PGGGESVIYGTVMGS+GA+L FSSR+DVDF
Sbjct: 1072 RLNGAPNKVEEIIQFHVGEVVTCMQKASLIPGGGESVIYGTVMGSVGALLPFSSREDVDF 1131

Query: 1138 FSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            FSHLEMHMRQEHPPLCGRDHMA+RSAYFPVKDVIDGDLCEQ+PTL  DLQRKIA+ELDRT
Sbjct: 1132 FSHLEMHMRQEHPPLCGRDHMAFRSAYFPVKDVIDGDLCEQYPTLPPDLQRKIAEELDRT 1191

Query: 1198 PGEILKKLEEIRNKIV 1213
            PGE++KKLE+IRN+I+
Sbjct: 1192 PGEVMKKLEDIRNRII 1207


>gi|384253371|gb|EIE26846.1| hypothetical protein COCSUDRAFT_52476 [Coccomyxa subellipsoidea
            C-169]
          Length = 1205

 Score = 1625 bits (4207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 781/1216 (64%), Positives = 956/1216 (78%), Gaps = 16/1216 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLY+LTL + +GI  AI GNFS  K  EIVV+RGK LELLRP+++GR++T+ +TE+FG 
Sbjct: 1    MYLYNLTLSRASGIQCAIYGNFSAPKAQEIVVSRGKTLELLRPDDTGRVQTIFTTEVFGC 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLA FRLTG+ +DY++VGSDSGRIVILEY   +N F KIHQET+GKSGCRRIVPGQYL
Sbjct: 61   IRSLAPFRLTGASRDYVIVGSDSGRIVILEYIKEQNYFRKIHQETYGKSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRA +IGA EKQKLVYVLNRD AA LTISSPLEAHKSH IV+S+ G+D GFDNP+
Sbjct: 121  AVDPKGRACLIGAMEKQKLVYVLNRDQAANLTISSPLEAHKSHNIVFSVIGLDMGFDNPV 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDY++ADQD TG+AA  AQK LT YELDLGLNHV+RKWS+ VDNGAN+LV VPGG
Sbjct: 181  FAAIELDYADADQDPTGEAAGNAQKQLTLYELDLGLNHVTRKWSQEVDNGANLLVPVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGP GVLVCAENF+IY NQ H DVRAVIPRR  L  +RGVLIVS A H+QK+LFFFL+Q
Sbjct: 241  ADGPGGVLVCAENFIIYSNQDHADVRAVIPRRTSLLIDRGVLIVSYAMHKQKSLFFFLVQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +EYGD++KVTL +  + V+ELKIKYFDTIP   S+CVLK+G+LFAASEFGNHALYQF +I
Sbjct: 301  SEYGDLYKVTLAYSGDTVTELKIKYFDTIPPCISICVLKTGFLFAASEFGNHALYQFLSI 360

Query: 361  GADPD-VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            G D D VEASS+ L ET+EGFQPVFF PR L+NL  +++VESL PIMD ++ANL +EE P
Sbjct: 361  GDDDDAVEASSAELTETQEGFQPVFFDPRPLRNLRLVDEVESLSPIMDFKVANLLKEEIP 420

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            Q++ +CGRG RS+LR+LRPGLA +E+AVS LPG P+AVWT+K++VND FDAYI+VSF NA
Sbjct: 421  QLYAMCGRGARSTLRVLRPGLAATEIAVSPLPGNPTAVWTLKRSVNDPFDAYIIVSFTNA 480

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
            TLVLSIGETV EV+DSGFL T P+L   L+ DDS++QVHPSG+RHIR D R+NEWR PG+
Sbjct: 481  TLVLSIGETVVEVNDSGFLGTVPTLRTQLLTDDSMLQVHPSGLRHIRADRRVNEWRAPGR 540

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            RTIVK  +N  QVVIALSGGELIYFE+  TGQL+EVEK EM+GDV CLDIA VPEGR+RS
Sbjct: 541  RTIVKAATNEQQVVIALSGGELIYFELSPTGQLMEVEKKEMAGDVVCLDIAPVPEGRQRS 600

Query: 600  RFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQAS--VGGEDGADHPAS 657
            RFLAV SYD+++RILSLDP+D M  L+VQ VS+ PESLLF++  A+   G  + A     
Sbjct: 601  RFLAVASYDSSVRILSLDPEDMMSALAVQMVSAVPESLLFIDSPAADIAGKGEDASGAGG 660

Query: 658  LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLG 717
            LFLN GL NGVL RT VD VTGQLSD+R+RFLG RPPKLF+V V G+ +ML LSSRPWLG
Sbjct: 661  LFLNIGLLNGVLLRTEVDKVTGQLSDTRTRFLGTRPPKLFAVSVRGKRSMLALSSRPWLG 720

Query: 718  YIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLR 777
            Y   GR+ L PLSYE L+YA+ F+SDQC EG  +V+ + LR+ T+ERLGE FN+    LR
Sbjct: 721  YSDMGRYTLAPLSYEALDYASGFASDQCPEGFCAVSKSMLRILTLERLGEAFNQQVTRLR 780

Query: 778  YTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDE 837
            YTPR+FV+ P+  ++++ E D  A+   ER A            E+G      +  G + 
Sbjct: 781  YTPRKFVVHPESNMLIVAEADHAAVPLAERRAV-----------EDGMEMDAALTEGIEF 829

Query: 838  NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD-KE 896
            ++     +EQ+G PK  + +W SCIRVLDP S  T+ +LEL  NEAA S+C + F +  E
Sbjct: 830  DEERAAEEEQHGAPKNSTGRWASCIRVLDPTSLQTSSVLELDGNEAAVSLCLLRFSNWPE 889

Query: 897  HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRL 956
             G +LAVGT +GL F+P R    GYI +YRF + G+ LEL+HKT   GIP AL  F+GRL
Sbjct: 890  EGMVLAVGTVQGLAFYP-RTADEGYIRLYRFRDSGRQLELIHKTPTGGIPGALAAFKGRL 948

Query: 957  LAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN 1016
            LAG+GP LR+Y+ GKK+LLRKCE++  P  I ++ T  DRI+VGD+QES H+ +Y+ +EN
Sbjct: 949  LAGVGPTLRIYEAGKKKLLRKCEHRKLPTHIATLATSGDRIFVGDLQESMHYFRYKANEN 1008

Query: 1017 QLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ 1076
             LY +ADD  PR LTAA  +D+DT+AGADKF NI+  RLP+DVS ++EEDPTGGK     
Sbjct: 1009 ALYEYADDIAPRHLTAALPLDYDTVAGADKFCNIFVTRLPRDVSTQVEEDPTGGKFAGAA 1068

Query: 1077 GKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
            G LNGAP+K+E++V FHVGD+VTSLQ+A L PGG E ++Y TVMG++GAML F SR+DVD
Sbjct: 1069 GLLNGAPHKLEDVVNFHVGDLVTSLQRAVLQPGGREVLLYATVMGAIGAMLPFPSREDVD 1128

Query: 1137 FFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
            FFSHLEMH+RQEHPP+ GRDHM+YR +YFPVKDVIDGDLCE F  L    Q+ IADEL+R
Sbjct: 1129 FFSHLEMHLRQEHPPMGGRDHMSYRGSYFPVKDVIDGDLCEHFSQLPAAKQKSIADELER 1188

Query: 1197 TPGEILKKLEEIRNKI 1212
            TPGEILKKLE+IRN++
Sbjct: 1189 TPGEILKKLEDIRNQV 1204


>gi|296086939|emb|CBI33172.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score = 1605 bits (4157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 801/1017 (78%), Positives = 841/1017 (82%), Gaps = 141/1017 (13%)

Query: 197  GQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVI 256
            G   S AQ  LT      G N    KWSE VDNGANMLVTVPGGGDGPSGVLVCAENFVI
Sbjct: 59   GAIRSLAQFRLTGSGAVFG-NRPKGKWSEQVDNGANMLVTVPGGGDGPSGVLVCAENFVI 117

Query: 257  YKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE 316
            YKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQK++FFFLLQTEYGD+FKVTLEH+N+
Sbjct: 118  YKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKSMFFFLLQTEYGDVFKVTLEHEND 177

Query: 317  HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMET 376
             +SELKIKYFDTIPVT+SMCVLKSG+LFAASEFGNH LYQFQAIG D DVE+SS++LMET
Sbjct: 178  RISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHGLYQFQAIGDDADVESSSASLMET 237

Query: 377  EEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRIL 436
            EEGFQPVFFQPRGLKNLVRI+QVESLMPIMDM+++NLFEEE PQIF LCGRGPRSS+RIL
Sbjct: 238  EEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVSNLFEEETPQIFALCGRGPRSSIRIL 297

Query: 437  RPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSG 496
            RPGLA+SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF NATLVLSIGETVEEVSDSG
Sbjct: 298  RPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDSG 357

Query: 497  FLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIAL 556
            FLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIAL
Sbjct: 358  FLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIAL 417

Query: 557  SGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSL 616
            SGGELIYFEVDMT                                  VGSYDNTIRILSL
Sbjct: 418  SGGELIYFEVDMT----------------------------------VGSYDNTIRILSL 443

Query: 617  DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDM 676
            DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDM
Sbjct: 444  DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDM 503

Query: 677  VTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEY 736
            VTG                                            FLLTPLSYETLE+
Sbjct: 504  VTGH-------------------------------------------FLLTPLSYETLEF 520

Query: 737  AASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIE 796
            AASFSSDQC EGVV+VAG+ALRVFTIERLGETFNET                        
Sbjct: 521  AASFSSDQCAEGVVAVAGDALRVFTIERLGETFNET------------------------ 556

Query: 797  TDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESD 856
                            ECFE                        DPLSDEQYGYPKAESD
Sbjct: 557  ----------------ECFED-----------------------DPLSDEQYGYPKAESD 577

Query: 857  KWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN 916
            KWVSCIR+LDPR+A TTCLLELQDNEAAFSICTVNFHDKE+GTLLAVGTAK LQFWPKR+
Sbjct: 578  KWVSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAVGTAKSLQFWPKRS 637

Query: 917  IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR 976
              AGYIHIYRF+E+GKSLELLHKTQVEG+PLALCQFQGRLLAGIG VLRLYDLGK+RLLR
Sbjct: 638  FDAGYIHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLYDLGKRRLLR 697

Query: 977  KCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI 1036
            KCENKLFPNTIVSI+TYRDRIYVGDIQESFH+CKYRRDENQLYIFADDSVPRWLTA++HI
Sbjct: 698  KCENKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHI 757

Query: 1037 DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGD 1096
            DFDTMAGADKFGNIYFVRLPQDVSDE+EEDPTGGKIKWEQGKLNGAPNK+EEIVQFHVGD
Sbjct: 758  DFDTMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGD 817

Query: 1097 VVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRD 1156
            VVT LQKASL+PGGGE +IYGTVMGSLGA+LAF+SRDDVDFFSHLEMHMRQEHPPLCGRD
Sbjct: 818  VVTCLQKASLIPGGGECIIYGTVMGSLGALLAFTSRDDVDFFSHLEMHMRQEHPPLCGRD 877

Query: 1157 HMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            HMAYRSAYFPVKDVIDGDLCEQFPTL LDLQRKIADELDRTPGEILKKLEE+RNKI+
Sbjct: 878  HMAYRSAYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPGEILKKLEEVRNKII 934



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/72 (79%), Positives = 66/72 (91%)

Query: 1  MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
          MYLYSLTLQQ TGI+ AINGNFSG K+ EIVVARGKVL+LLRP+ +G+I+T++S EIFGA
Sbjct: 1  MYLYSLTLQQATGIVCAINGNFSGGKSQEIVVARGKVLDLLRPDENGKIQTILSVEIFGA 60

Query: 61 IRSLAQFRLTGS 72
          IRSLAQFRLTGS
Sbjct: 61 IRSLAQFRLTGS 72


>gi|255081708|ref|XP_002508076.1| predicted protein [Micromonas sp. RCC299]
 gi|226523352|gb|ACO69334.1| predicted protein [Micromonas sp. RCC299]
          Length = 1199

 Score = 1535 bits (3974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 753/1216 (61%), Positives = 953/1216 (78%), Gaps = 22/1216 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LY+LTLQ+  G+  A+ GNFS  K  EIVV+R KVLELLRP+ SG+++T+VSTE+FG 
Sbjct: 1    MFLYNLTLQKGGGVQCAVYGNFSAPKAQEIVVSRNKVLELLRPDESGKMQTIVSTEVFGV 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLA FRLTG+ +DY+V GSDSGRIV+L+Y+  +N FDK+HQETFGKSGCRRIVPGQ+L
Sbjct: 61   IRSLAAFRLTGANRDYLVCGSDSGRIVVLQYDKERNRFDKVHQETFGKSGCRRIVPGQFL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
             VDPKGRA+MI A EK KLVYVLNRDT A LTISSPLEA+KSH + + +  +DCG DNP+
Sbjct: 121  CVDPKGRAIMIAAIEKAKLVYVLNRDTEANLTISSPLEANKSHVVAFHVAALDCGLDNPV 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDY++ADQDSTG+AA+EAQK+LTFYELDLGLNHV+RK SEP+DNGAN L+ VPGG
Sbjct: 181  FAAIELDYADADQDSTGEAAAEAQKHLTFYELDLGLNHVARKSSEPIDNGANHLIAVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGP GVLVCAENF+IYKNQGHPDVRAVIPRR  L  +RGVLIVS+ATHR K  FFFL Q
Sbjct: 241  GDGPGGVLVCAENFIIYKNQGHPDVRAVIPRRNALSGDRGVLIVSSATHRTKQQFFFLAQ 300

Query: 301  TEYGDIFKVTLEHD--NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            +EYGDI+KVT+E+    E VSE+KIKYFDTIP   S+CVLK+G+LFAASEFGNHALYQFQ
Sbjct: 301  SEYGDIYKVTVEYQKGTEFVSEVKIKYFDTIPPCVSICVLKTGFLFAASEFGNHALYQFQ 360

Query: 359  AIGADP-DVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE 417
             IG D  DVE+SS+TL+ET+EG+QPVFF+PR L+NL  I+ VESL P++DM+  NL  EE
Sbjct: 361  GIGDDEDDVESSSATLVETDEGYQPVFFEPRALRNLHPIDDVESLCPVLDMQCHNLVAEE 420

Query: 418  APQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFN 477
             PQ++ LCG GPRS+LR+LR G+A+SEMAVS LPG P+AV+TV+K+ +DEFDAYIVVSF 
Sbjct: 421  TPQLYALCGTGPRSTLRVLRQGVALSEMAVSPLPGNPNAVFTVRKSASDEFDAYIVVSFT 480

Query: 478  NATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTP 537
            NATLVLSIGETVEEVSDSGFL T P+L+ SL+GDDSL+QVHP G+RHIR D RINEWRTP
Sbjct: 481  NATLVLSIGETVEEVSDSGFLGTVPTLSASLLGDDSLLQVHPGGLRHIRADKRINEWRTP 540

Query: 538  GKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRK 597
            G++T+ +V +N  QV+IALSGGELIYFE+D TGQL+EVEK E SGDVACLDI  VPEG  
Sbjct: 541  GRKTVTRVTTNARQVIIALSGGELIYFELDQTGQLMEVEKLETSGDVACLDIGPVPEGHL 600

Query: 598  RSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPAS 657
            R+RFLAVGS+D+T+RILSL  +DC+Q + VQ++++ P SLL L        +DG+    S
Sbjct: 601  RNRFLAVGSFDSTVRILSLGAEDCLQTMGVQALAAAPNSLLMLR-------DDGS---GS 650

Query: 658  LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLG 717
            ++LN GL NGVL R  VD VTGQLSD+R+RFLG RPPKL +V V G+AAM+ LSSRPWLG
Sbjct: 651  IYLNVGLTNGVLLRADVDSVTGQLSDTRARFLGARPPKLSAVSVQGKAAMMALSSRPWLG 710

Query: 718  YIH-RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
            +     RF L+PLSYE LE+AA FSSD C EGVV+VAGN LR+  +ERLGE FN+    L
Sbjct: 711  HFDLANRFALSPLSYEPLEHAAPFSSDACPEGVVAVAGNTLRIVAVERLGEQFNQRTCKL 770

Query: 777  RYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDD 836
            RYTPR+  +   +  + ++E DQ ++  +ER        E A   ++   +++  E+ ++
Sbjct: 771  RYTPRQMSVNVDRNTLAVVECDQSSVPYDERTG-----LEGAAGEKDTKMDVEGEEDDEE 825

Query: 837  ENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE 896
            E++      EQ+G PKA    W SC+R++DP SA+T  ++E+  NEAA   C V F   +
Sbjct: 826  EDEVTMTPAEQFGAPKAPPGSWASCVRIVDPASASTKQIVEMTGNEAALCCCHVYFPQAD 885

Query: 897  HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRL 956
                LAVG+A  L F P R+   G+IH+YR+ ++G  +EL HKT ++G+P A+C F+GRL
Sbjct: 886  E-LFLAVGSAVSLTFSP-RDSEGGFIHLYRYTQDG-GIELFHKTPLDGVPGAMCGFKGRL 942

Query: 957  LAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN 1016
            L G+G  LRLYD GKK+LLRK EN+ FPN I +I+   +RIYVGD+QESFH+ +Y+R++ 
Sbjct: 943  LVGVGNTLRLYDFGKKKLLRKVENRNFPNFIKTIHAQGERIYVGDVQESFHYVRYKREDG 1002

Query: 1017 QLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ 1076
             +YI ADD  PR +TAA  +D+DT+AG D+FGN++  RL QDVSDEIEEDPTGGK  + Q
Sbjct: 1003 SMYIVADDVQPRHVTAACPLDYDTIAGGDRFGNVFVSRLAQDVSDEIEEDPTGGKTAYGQ 1062

Query: 1077 GKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
            G LNGA +K+ ++ QFHVG+ V +L K +L  GG ES+IY T+MG+LGA++ F +R+DVD
Sbjct: 1063 GALNGASHKINQVTQFHVGETVCALTKGTLQAGGLESMIYATLMGTLGALMPFGNREDVD 1122

Query: 1137 FFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
            F +HLEMHMRQE PPL GRDH+A+RS+YFPVKDVIDGDLCE +  L  + QR++A+++DR
Sbjct: 1123 FCTHLEMHMRQELPPLLGRDHLAFRSSYFPVKDVIDGDLCEMYTVLPHEAQRRVAEDMDR 1182

Query: 1197 TPGEILKKLEEIRNKI 1212
            T  E+LKKLE++R K+
Sbjct: 1183 TVSEVLKKLEDLRAKV 1198


>gi|303285956|ref|XP_003062268.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456679|gb|EEH53980.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1213

 Score = 1509 bits (3908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 751/1228 (61%), Positives = 951/1228 (77%), Gaps = 32/1228 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LY+LTLQ+  GI  A+ GNFS  K  EIV +R KVLELLRP+++G+++T+VSTE+FG 
Sbjct: 1    MHLYNLTLQKGGGIQCAVYGNFSAPKAQEIVASRNKVLELLRPDDAGKMQTIVSTEVFGV 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +RSL+ FRLTG+ +DY+VVGSDSGRIV+L ++  K+ F K+HQETFGKSGCRRIVPGQ+L
Sbjct: 61   VRSLSAFRLTGANRDYVVVGSDSGRIVVLSFDKEKSAFVKVHQETFGKSGCRRIVPGQFL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRAVMIGA EK K+VYVLNRDT+A LTISSPLEA+KSH I +++C +DCG DNP 
Sbjct: 121  AVDPKGRAVMIGAIEKSKIVYVLNRDTSANLTISSPLEANKSHVITFAVCALDCGLDNPQ 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAA+ELDY +ADQD TG+AA+EAQK+L FYELDLGLNHV RKWSE +DNGAN L+ VPGG
Sbjct: 181  FAAVELDYGDADQDPTGEAAAEAQKHLVFYELDLGLNHVVRKWSEAIDNGANHLIAVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGP G LVCAENF+IYKN+GH DVRAVIPRR+ L  +RGVLIVS+ATHR K  FFFL Q
Sbjct: 241  GDGPGGCLVCAENFIIYKNEGHADVRAVIPRRSSLSGDRGVLIVSSATHRTKQQFFFLAQ 300

Query: 301  TEYGDIFKVTLEHD--NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            +EYGD++KVT+E    +E VSE+KIKYFDTIP  AS+CVLK+G+LFAASEF NHALYQFQ
Sbjct: 301  SEYGDVYKVTVEWTPGSETVSEVKIKYFDTIPPCASLCVLKTGFLFAASEFSNHALYQFQ 360

Query: 359  AIG-ADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE 417
             IG  D DVE+SS+TL+ET+EG+QPVFF+PR L+NL  I+++ESL P++D +  NL  EE
Sbjct: 361  GIGDDDDDVESSSATLVETDEGYQPVFFEPRALRNLHPIDEIESLCPVLDAQCHNLTSEE 420

Query: 418  APQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFN 477
             PQ++ LCG G RS+LR+LR G+A+SEMAVS LPG P+AV+TVKKN+ DEFDAYIVVSF 
Sbjct: 421  TPQVYALCGAGSRSTLRVLRQGVALSEMAVSPLPGNPNAVFTVKKNIADEFDAYIVVSFV 480

Query: 478  NATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTP 537
            NATLVLSIGETVEEVSDSGFL TTP+L+ SL+GDDSL+Q HP G+RH+R D RINEWR P
Sbjct: 481  NATLVLSIGETVEEVSDSGFLGTTPTLSASLLGDDSLLQAHPGGLRHVRADKRINEWRCP 540

Query: 538  GKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRK 597
            G++TI +V  N  QVVIALSGGE+IYFE+D TGQL+E+EK E +GDVACL +  VPEG  
Sbjct: 541  GRKTITRVACNNRQVVIALSGGEIIYFELDSTGQLMEIEKLETNGDVACLHVGPVPEGSL 600

Query: 598  RSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPAS 657
            R+RFLAVGS+D+T+R+LSL  DDC+Q + VQ++++ P SLL L  Q   GG         
Sbjct: 601  RNRFLAVGSFDSTVRVLSLSADDCLQTMGVQALAAAPCSLLML--QTREGG--------- 649

Query: 658  LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLG 717
            L+LN GL NGVL R  VD VTGQLSD+R+RFLG RPPKL    V G+ AML LSSRPWLG
Sbjct: 650  LYLNVGLANGVLLRAEVDRVTGQLSDTRARFLGARPPKLHGATVRGQPAMLALSSRPWLG 709

Query: 718  YIH-RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
            ++  + RF L PLSYE LE+AA F+SDQC EGVV+VAG+ LR+ ++ERLG+ FN+T+  L
Sbjct: 710  HVDLQRRFALAPLSYEALEHAADFTSDQCPEGVVAVAGSTLRIVSVERLGDAFNQTSCKL 769

Query: 777  RYTPRRFVLQPKKKLMVIIETDQGALTAEERE-----AAKKECFE--AAGMGENGNGNMD 829
            RYTPR+  + P + ++ I+E DQ ++  +ER      A +K+  E  AA M     G ++
Sbjct: 770  RYTPRQLTVHPDRGIVAIVEADQSSVPYDERAGPEGVAGEKKVKEESAAKMEGVEGGGVE 829

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-----RSANTTCLLELQDNEAA 884
              ++ DD++++     EQ+G PKA    W SC+R++ P      +     ++E+  NEAA
Sbjct: 830  DDDDDDDDDEFAMTPAEQFGAPKAPPGSWASCLRIVHPADVAKENGGAKQVIEMTGNEAA 889

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
               C V F    +   LAVGTA GL F P R+   G++H+YR++E+G ++ L+HKT ++G
Sbjct: 890  LCACHVYF-PVANEVFLAVGTAVGLTFAP-RDCDGGFVHLYRYLEDG-TVTLVHKTPLDG 946

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+C F+GRLL G G  LRLYD GKK+LLRK EN+ FPN I +++   DRIYVGD+QE
Sbjct: 947  VPGAMCGFKGRLLLGCGNALRLYDFGKKKLLRKVENRNFPNFITTVHASGDRIYVGDVQE 1006

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SFHF KY+R++  L I ADD  PR +TAA  +D+DTMAGADKFGN++  RL QDVS +IE
Sbjct: 1007 SFHFVKYKREDLSLIIVADDVQPRHITAALPLDYDTMAGADKFGNVFVARLAQDVSADIE 1066

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTGGK     G LNGAP K+E + QFHVG+ V +L K +L  GG E ++Y T+MG++G
Sbjct: 1067 EDPTGGKASG--GTLNGAPRKVEHVAQFHVGETVCALTKGTLQAGGLECMLYATLMGTVG 1124

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
            A++ F+SR DVDF +HLEMH+RQE+PPL GRDHMAYRSAYFPVKDV+DGDLCEQ+ TL  
Sbjct: 1125 ALMPFTSRADVDFATHLEMHVRQENPPLLGRDHMAYRSAYFPVKDVVDGDLCEQYVTLPA 1184

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            + QR IA+E+DRTP E++KKLE++R KI
Sbjct: 1185 ETQRAIAEEMDRTPAEVMKKLEDLRAKI 1212


>gi|297598550|ref|NP_001045829.2| Os02g0137400 [Oryza sativa Japonica Group]
 gi|255670583|dbj|BAF07743.2| Os02g0137400 [Oryza sativa Japonica Group]
          Length = 845

 Score = 1506 bits (3898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 711/845 (84%), Positives = 785/845 (92%), Gaps = 5/845 (0%)

Query: 374  METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSL 433
            MET+EGFQPVFFQPR LKNL RI+++ESLMPIMDMR+ANLF+EE PQ+FT CGRGPRS+L
Sbjct: 1    METDEGFQPVFFQPRALKNLYRIDEIESLMPIMDMRVANLFDEETPQVFTACGRGPRSTL 60

Query: 434  RILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVS 493
            RILRPGLA+SEMA S LP  P AVWTVKKN+ND FDAYIVVSF N TLVLSIGET+EEVS
Sbjct: 61   RILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFANVTLVLSIGETIEEVS 120

Query: 494  DSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVV 553
            DS FLDTT SLAVSL+G+DSLMQVHP+GIRHIREDGR+NEWRTPGK+TI KVGSNRLQVV
Sbjct: 121  DSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDGRVNEWRTPGKKTITKVGSNRLQVV 180

Query: 554  IALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRI 613
            IALSGGELIYFE+DMTGQL+EVEK +MSGDVACL IA VPEGR+RSRFLAVGS+DNTIRI
Sbjct: 181  IALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEGRQRSRFLAVGSFDNTIRI 240

Query: 614  LSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTV 673
            LS+DPDDC+Q LSVQSVSS PESL+FLEVQASVGGEDGADHPA+LFLNAGLQNGVLFRT 
Sbjct: 241  LSVDPDDCLQPLSVQSVSSAPESLMFLEVQASVGGEDGADHPANLFLNAGLQNGVLFRTN 300

Query: 674  VDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYET 733
            VDMVTGQLSD+RSRFLGLRPPKLF  +V  R AMLCLSSRPWLGYIH+G FLLTPLS +T
Sbjct: 301  VDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDT 360

Query: 734  LEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMV 793
            LE AASFSSDQC EGVV+VAG+ALR+FTIE LGETFNETA+PLRYTPR+FV+ PKKK + 
Sbjct: 361  LESAASFSSDQCSEGVVAVAGDALRIFTIEHLGETFNETAIPLRYTPRKFVILPKKKYLA 420

Query: 794  IIETDQGALTAEEREAAKKECFEAAGMGENGNGNM-DQMENGDDE----NKYDPLSDEQY 848
            +IE+D+GAL+AEEREAAKKEC EAAG+ ENGN N  DQMENGD +       + L DEQY
Sbjct: 421  VIESDKGALSAEEREAAKKECLEAAGVTENGNANNGDQMENGDGQEDGAEDRNTLPDEQY 480

Query: 849  GYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKG 908
            GYPKAES++WVSCIR+LDP+S +TTCLLELQDNEAA SICTVNFHDKEHGTLLAVGTAKG
Sbjct: 481  GYPKAESERWVSCIRILDPKSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTAKG 540

Query: 909  LQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYD 968
            LQFWPKRN+ AG+IHIY+FV+EG+SLELLHKTQVE +PLALCQFQGRLLAG+G VLRLYD
Sbjct: 541  LQFWPKRNLSAGFIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLYD 600

Query: 969  LGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPR 1028
            LGK++LLRKCENKLFP TIVSI+TYRDRIYVGD+QESFH+CKYRRDENQLYIFADDSVPR
Sbjct: 601  LGKRKLLRKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPR 660

Query: 1029 WLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEE 1088
            WLTAA+HIDFDTMAGADKFGNIYF RLPQD+SDEIEEDPTGGKIKWEQGKLNGAPNK+EE
Sbjct: 661  WLTAANHIDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEE 720

Query: 1089 IVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQE 1148
            IVQFHVGDVVT LQKASL+PGGGE +IYGTVMGS+GA+LAF+SR+DVDFFSHLEMH+RQE
Sbjct: 721  IVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQE 780

Query: 1149 HPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            HPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP+L  D+QRKIADELDRTPGEILKKLE+I
Sbjct: 781  HPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPSLPADMQRKIADELDRTPGEILKKLEDI 840

Query: 1209 RNKIV 1213
            RNKI+
Sbjct: 841  RNKII 845


>gi|302831461|ref|XP_002947296.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
 gi|300267703|gb|EFJ51886.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
          Length = 1221

 Score = 1501 bits (3887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1234 (58%), Positives = 933/1234 (75%), Gaps = 34/1234 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LYSLTL + +GI +A+ GNFS  K  E+VV+RGK+LELLRP  +G+++T+V+TE+FG 
Sbjct: 1    MFLYSLTLSRASGIQSAVYGNFSAPKAQEVVVSRGKILELLRPNENGKMQTVVATEVFGC 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRS+A  RLTGS  D++VVGSDSGRI++L++N  KNV+ K+HQETFG+SGCRRIVPGQY+
Sbjct: 61   IRSMAAVRLTGSILDHLVVGSDSGRIILLKFNKDKNVWVKVHQETFGRSGCRRIVPGQYI 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRA MIGA EKQK VYVLNRD AA LTISSPLEAHKSH I +SICG+DCGFDNPI
Sbjct: 121  AVDPKGRACMIGAVEKQKFVYVLNRDAAANLTISSPLEAHKSHHITFSICGMDCGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQD TG+AAS AQK+LTFYE+DLGLN+V RKW+EP+DNGAN+LV VPGG
Sbjct: 181  FAAIELDYSEADQDPTGEAASMAQKHLTFYEMDLGLNNVLRKWTEPIDNGANLLVAVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGP GVLVCAENF+IYKNQ H +VRAVIPRR+DLP +RGVLIVS ATH++K   FFL+Q
Sbjct: 241  ADGPGGVLVCAENFIIYKNQDHEEVRAVIPRRSDLPGDRGVLIVSYATHKKKAYSFFLVQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +EYGDI+KVTL ++ E V+ELKIKYFDTIP   S+ VLK+G+LFAASE+GNHALYQF   
Sbjct: 301  SEYGDIYKVTLAYEGEAVTELKIKYFDTIPPCTSIAVLKTGFLFAASEYGNHALYQFVGT 360

Query: 361  GA-DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            G  D DVE+SS+ L++TEEGFQPVFF+PR LKNL+ I+++ SLMPI DM++ANL  EE P
Sbjct: 361  GEDDEDVESSSAALVQTEEGFQPVFFEPRPLKNLLLIDEMASLMPITDMKVANLLNEEIP 420

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QI+ LCG GPR+SL +LRPGLAV+E+AVS LPG P+AVWTV++N  DEFDA+IVVSF NA
Sbjct: 421  QIYALCGHGPRASLSVLRPGLAVTELAVSPLPGAPTAVWTVRRNATDEFDAFIVVSFANA 480

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLM----------QVHPSGIRHIREDG 529
            TLV SIGE V+E ++SGFL T P+L   L+ D+S++          QV+P G+RHI+ D 
Sbjct: 481  TLVFSIGEEVKETNESGFLGTVPTLHTQLLADNSMLQATFFDLSEPQVYPGGLRHIKPDR 540

Query: 530  RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDM-TGQLLEVEKHEMSGDVACLD 588
            RINEW+ PG+R I    SN  QV IAL GGE+  FE+++ TG L+E EK ++  DV+CL+
Sbjct: 541  RINEWKVPGRRNIKAAASNEKQVAIALQGGEVTVFELEVGTGLLVEAEKRDLGEDVSCLE 600

Query: 589  IASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGG 648
            I  VPEG  RS FLAVG+YD T+R+LSLDP   ++ LS+Q+++S PES+L L      G 
Sbjct: 601  IPPVPEGLVRSSFLAVGTYDQTVRVLSLDPGQGLKNLSMQALNSVPESILML-YNTGPGT 659

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
            E   +    LFL+ GLQNG+L R+ VD ++GQL+DSR+RFLG +PPKLF+  V G   ML
Sbjct: 660  ERATE--GGLFLHVGLQNGILIRSEVDRISGQLTDSRTRFLGTKPPKLFAAAVRGNRCML 717

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             LSSRPWLGY  +GRF L+PLSYE L+YA+ F+SDQC EG V+V  + LR+  +E +G+ 
Sbjct: 718  ALSSRPWLGYNDQGRFNLSPLSYEALDYASGFASDQCPEGFVAVVKSTLRILAVENVGDA 777

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
            FN  A  LRYTPRR ++ P+ KL++I E+D  A+   ERE  + +    A + E     +
Sbjct: 778  FNTQACRLRYTPRRLLIHPETKLLMIAESDNAAIPLAEREDLQAKL---AALAEEEGAPV 834

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
              +E  D+        +EQ+G PK +  +W  C+R++DP + +T  + E+ +NEA  S+ 
Sbjct: 835  QGVEFNDELAAL----EEQFGAPKGQPGQWAGCLRLVDPATLSTVFVTEVDNNEAIVSMA 890

Query: 889  TVN--------FHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
             V+        F   E   LL VG AKGL++ P  +  A YI +YR  + GK LEL+HKT
Sbjct: 891  LVDLVLPAGPGFGGTEK--LLVVGCAKGLRYMPT-DCEAAYIRVYRLADGGKRLELVHKT 947

Query: 941  QVE-GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
             V+ G+P ALC F+GRLLAG+GP LRLYD+GKK+LLRKCE    P+ I++I     RIYV
Sbjct: 948  IVDGGVPGALCGFKGRLLAGVGPTLRLYDMGKKKLLRKCEYNRLPHQIMNITVQGPRIYV 1007

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD QES H  +Y++ +N  YIFADD  PR+LT    +D+DT+A  DKFGN   +RLP++ 
Sbjct: 1008 GDAQESVHMMRYKKADNAFYIFADDIAPRYLTTILPLDYDTLAAGDKFGNFVVLRLPREA 1067

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S ++E+DPTGGK+    G+LNGAP+K+EE+V+FHVGD +TSLQ+A +  GG E ++Y TV
Sbjct: 1068 SQQVEDDPTGGKMAAASGRLNGAPHKLEEVVKFHVGDTITSLQRAEMQAGGQEVLLYSTV 1127

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            MG++G +  F++R+DVDFF HLEMH+RQEHPPLCGRDH+++RSAYFPV+  +DGDLC Q+
Sbjct: 1128 MGAIGVLYPFTNREDVDFFGHLEMHLRQEHPPLCGRDHLSFRSAYFPVRSCVDGDLCGQY 1187

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
             ++    Q+ IA+ +DRTPGE+LKKLE+IRNKI+
Sbjct: 1188 ASIPAKKQQMIAEAMDRTPGEMLKKLEDIRNKIL 1221


>gi|224064143|ref|XP_002188384.1| PREDICTED: splicing factor 3B subunit 3 [Taeniopygia guttata]
          Length = 1217

 Score = 1489 bits (3855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1227 (59%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKNVF+KIHQETFGKSGCRRIVPGQY
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILCCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV+++V DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGDEWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNSGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVAEELDRTPPEVSKKLEDIRTR 1214


>gi|326927039|ref|XP_003209702.1| PREDICTED: splicing factor 3B subunit 3-like [Meleagris gallopavo]
 gi|363738006|ref|XP_001232348.2| PREDICTED: splicing factor 3B subunit 3 [Gallus gallus]
          Length = 1217

 Score = 1488 bits (3853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1227 (59%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKNVF+KIHQETFGKSGCRRIVPGQY
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILCCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV+++V DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGEEWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNGGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVAEELDRTPPEVSKKLEDIRTR 1214


>gi|145348011|ref|XP_001418451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578680|gb|ABO96744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1196

 Score = 1486 bits (3848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 705/1211 (58%), Positives = 916/1211 (75%), Gaps = 20/1211 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            ++LY+LTLQ+ +GI AA+ GNFS +K  EIVV R KV+ELLRP+ SGR++++ S E FG 
Sbjct: 2    VHLYNLTLQKSSGINAAVYGNFSASKAQEIVVLRNKVVELLRPDESGRVQSVTSVEAFGI 61

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
             RS+A  RL G+ +DY+V+GSDSGR+V+L+++  KN F K+HQET+GK+GCRRIVPGQ+L
Sbjct: 62   ARSIATLRLAGANRDYLVLGSDSGRVVVLQFDKEKNAFVKVHQETYGKTGCRRIVPGQFL 121

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
              DPKGRA+ +GA EK KLVYV+NRD  A LTISSPLEA+KSHTIV+ +C +DCG DNPI
Sbjct: 122  CADPKGRAICLGAVEKNKLVYVMNRDNEANLTISSPLEANKSHTIVFHMCALDCGLDNPI 181

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDY +AD D +G+A +EAQK+LT+YELDLGLNHV RKWSEP+DNGAN L+ VPGG
Sbjct: 182  FAAIELDYGDADADPSGEAVAEAQKHLTYYELDLGLNHVVRKWSEPIDNGANHLIPVPGG 241

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGP GVLVC ENFVIY++Q H +VRAVIPRR  L A+RGVLIVS+A+HR K  FFFL Q
Sbjct: 242  SDGPGGVLVCCENFVIYRHQNHDEVRAVIPRRNSLAADRGVLIVSSASHRSKNSFFFLAQ 301

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +EYGDI+K+T+++  E VSE+K+KYFDTIP   S+CVLK+G+LFAASEFGNHALYQF  I
Sbjct: 302  SEYGDIYKLTIDYSGETVSEVKVKYFDTIPPCVSLCVLKTGFLFAASEFGNHALYQFAGI 361

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G D  VE+SS++LMETEEG++PVFF PR L NL  I+ ++SL P++DM+  NL EEE PQ
Sbjct: 362  GDDDAVESSSASLMETEEGYEPVFFDPRPLTNLYTIDTIDSLCPVLDMQAHNLTEEEMPQ 421

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            ++TLCG G RSSLRILR G+A++E+A+S LPG P+A++TVKK+ ++E+D+YI+VSF NAT
Sbjct: 422  LYTLCGTGARSSLRILRQGIAMNELAMSPLPGQPNAIFTVKKSSSEEYDSYIIVSFLNAT 481

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVLSIG+TV EV+DSG L TT +L   L+ D+SL+Q+HP G+RHI+ D RINEWRTPG++
Sbjct: 482  LVLSIGDTVSEVNDSGILGTTTTLQACLMSDESLLQIHPGGLRHIKADKRINEWRTPGRK 541

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
             I K   N  QVVIAL+GGE+IYFE+D  GQL+EVEK E SGD+ACLDI  VPEG  R+R
Sbjct: 542  QISKCTCNSKQVVIALTGGEVIYFELDSAGQLIEVEKLETSGDIACLDIGPVPEGALRNR 601

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVS-SPPESLLFLEVQASVGGEDGADHPASLF 659
            FLA+GSYD T+R++SL+PDDC+Q L+VQ++  S P SLL L+   +   + G      L 
Sbjct: 602  FLAMGSYDGTVRVMSLNPDDCLQTLAVQALKGSAPSSLLVLQTAGTESTQGG------LL 655

Query: 660  LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYI 719
            LN G+ NGVL R  +D V+GQLSD R RFLG R PKL    V G  A++ LSSRPWLGY 
Sbjct: 656  LNVGMANGVLIRATIDQVSGQLSDMRMRFLGARAPKLVRTSVRGAPALVALSSRPWLGYS 715

Query: 720  HRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYT 779
             +G F+L P+SY  LE   SF+S+QC EGVV+++   LR+ +IERLGE FN+T + LRYT
Sbjct: 716  EKGTFVLAPISYVPLEEVCSFNSEQCPEGVVAISNQTLRIASIERLGENFNQTTVKLRYT 775

Query: 780  PRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENK 839
            PR     P  K++ +IE+DQ  +   ERE  +    + A              N +DE +
Sbjct: 776  PRAMSANPDTKMVALIESDQCTVPVGEREGPEATPADEA-----------PETNDEDEEE 824

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGT 899
               L  EQ+G PK+    W +C+R++DP+ A +T +LEL  +EAA S+C V F    +  
Sbjct: 825  AKMLPVEQFGAPKSSPGTWAACVRIVDPKEAKSTFVLELHKSEAALSLCHV-FLTGPNEL 883

Query: 900  LLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAG 959
            LLAVGTA  L F P RN   G+IH+YR+  +G++L L+H T  +G   ALC ++G LLAG
Sbjct: 884  LLAVGTAVNLTFAP-RNCDGGFIHLYRYGNDGRTLNLVHSTPTDGPVGALCGYKGHLLAG 942

Query: 960  IGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLY 1019
            +   LR+YD GKK+LLRK EN+ FPN I +++   DRIYVGD+QES H+ KY+ DE  +Y
Sbjct: 943  VNNSLRIYDYGKKKLLRKVENRNFPNFITTLHAAGDRIYVGDVQESIHYVKYKADEGSIY 1002

Query: 1020 IFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1079
            IFADD+ PR++TA   +D+DT+AGADKFGNI+  RLP+DVS+++++DPTGGK  + QG L
Sbjct: 1003 IFADDTKPRYITATLPLDYDTLAGADKFGNIFVNRLPKDVSEDMDDDPTGGKNIYSQGVL 1062

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS 1139
            NGAPNK E   Q ++G+ V +L K +L PGG E ++YGT MG +G +L FSSR +++FF+
Sbjct: 1063 NGAPNKSETSAQTYIGETVCALTKGALQPGGIEIIMYGTFMGGIGCLLPFSSRSEIEFFT 1122

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
            HLEMHMRQE P + GRDHMA+RS Y PVK+VIDGDLCEQF  L  D+QR+IA+E+DRTPG
Sbjct: 1123 HLEMHMRQEAPSIVGRDHMAFRSYYAPVKNVIDGDLCEQFGALPADVQRRIAEEMDRTPG 1182

Query: 1200 EILKKLEEIRN 1210
            EILKKLE++R+
Sbjct: 1183 EILKKLEQVRS 1193


>gi|395836972|ref|XP_003791420.1| PREDICTED: splicing factor 3B subunit 3 [Otolemur garnettii]
          Length = 1217

 Score = 1486 bits (3847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 723/1227 (58%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA S +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGSGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGEEWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|19527174|ref|NP_598714.1| splicing factor 3B subunit 3 [Mus musculus]
 gi|297207121|ref|NP_001099657.2| splicing factor 3B subunit 3 [Rattus norvegicus]
 gi|354477789|ref|XP_003501101.1| PREDICTED: splicing factor 3B subunit 3 [Cricetulus griseus]
 gi|81879817|sp|Q921M3.1|SF3B3_MOUSE RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=Spliceosome-associated
            protein 130; Short=SAP 130
 gi|15030278|gb|AAH11412.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|26353236|dbj|BAC40248.1| unnamed protein product [Mus musculus]
 gi|27503728|gb|AAH42580.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|148679525|gb|EDL11472.1| splicing factor 3b, subunit 3 [Mus musculus]
 gi|187951307|gb|AAI39016.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|187954163|gb|AAI39017.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|344248014|gb|EGW04118.1| Splicing factor 3B subunit 3 [Cricetulus griseus]
          Length = 1217

 Score = 1485 bits (3845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1227 (58%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILSP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|54112121|ref|NP_036558.3| splicing factor 3B subunit 3 [Homo sapiens]
 gi|118150814|ref|NP_001071319.1| splicing factor 3B subunit 3 [Bos taurus]
 gi|296231541|ref|XP_002761182.1| PREDICTED: splicing factor 3B subunit 3 isoform 2 [Callithrix
            jacchus]
 gi|332846357|ref|XP_511081.3| PREDICTED: splicing factor 3B subunit 3 [Pan troglodytes]
 gi|397518709|ref|XP_003829523.1| PREDICTED: splicing factor 3B subunit 3 [Pan paniscus]
 gi|402908991|ref|XP_003917214.1| PREDICTED: splicing factor 3B subunit 3 [Papio anubis]
 gi|403298333|ref|XP_003939977.1| PREDICTED: splicing factor 3B subunit 3 [Saimiri boliviensis
            boliviensis]
 gi|426382761|ref|XP_004057969.1| PREDICTED: splicing factor 3B subunit 3 [Gorilla gorilla gorilla]
 gi|116242787|sp|Q15393.4|SF3B3_HUMAN RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=STAF130; AltName:
            Full=Spliceosome-associated protein 130; Short=SAP 130
 gi|125987788|sp|A0JN52.1|SF3B3_BOVIN RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=Spliceosome-associated
            protein 130; Short=SAP 130
 gi|117306205|gb|AAI26519.1| Splicing factor 3b, subunit 3, 130kDa [Bos taurus]
 gi|119572190|gb|EAW51805.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_c [Homo sapiens]
 gi|168274284|dbj|BAG09562.1| splicing factor 3B subunit 3 [synthetic construct]
 gi|296478233|tpg|DAA20348.1| TPA: splicing factor 3B subunit 3 [Bos taurus]
 gi|355710371|gb|EHH31835.1| Spliceosome-associated protein 130 [Macaca mulatta]
 gi|355756944|gb|EHH60552.1| Spliceosome-associated protein 130 [Macaca fascicularis]
 gi|380811142|gb|AFE77446.1| splicing factor 3B subunit 3 [Macaca mulatta]
 gi|383417057|gb|AFH31742.1| splicing factor 3B subunit 3 [Macaca mulatta]
 gi|384946118|gb|AFI36664.1| splicing factor 3B subunit 3 [Macaca mulatta]
 gi|410209986|gb|JAA02212.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
 gi|410260956|gb|JAA18444.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
 gi|410355121|gb|JAA44164.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
          Length = 1217

 Score = 1485 bits (3844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1227 (58%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|149640712|ref|XP_001506454.1| PREDICTED: splicing factor 3B subunit 3 [Ornithorhynchus anatinus]
 gi|395508661|ref|XP_003758628.1| PREDICTED: splicing factor 3B subunit 3 [Sarcophilus harrisii]
          Length = 1217

 Score = 1485 bits (3844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1227 (58%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGAEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S +RV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGDDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNSGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|40788938|dbj|BAA32662.2| KIAA0017 protein [Homo sapiens]
          Length = 1253

 Score = 1485 bits (3844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1227 (58%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 37   MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 96

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 97   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 156

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 157  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 216

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 217  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 276

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 277  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 335

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 336  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 395

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 396  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 453

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 454  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 513

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 514  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 573

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 574  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 633

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 634  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 689

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 690  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 749

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 750  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 809

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 810  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 869

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 870  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 924

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 925  FSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 983

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 984  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1043

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1044 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1103

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1104 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1163

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1164 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1223

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1224 NKQKNVSEELDRTPPEVSKKLEDIRTR 1250


>gi|73957045|ref|XP_536791.2| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Canis lupus
            familiaris]
 gi|149699332|ref|XP_001500880.1| PREDICTED: splicing factor 3B subunit 3 [Equus caballus]
 gi|301771131|ref|XP_002920989.1| PREDICTED: splicing factor 3B subunit 3-like [Ailuropoda melanoleuca]
 gi|344290794|ref|XP_003417122.1| PREDICTED: splicing factor 3B subunit 3-like [Loxodonta africana]
 gi|410983914|ref|XP_003998280.1| PREDICTED: splicing factor 3B subunit 3 [Felis catus]
 gi|426242169|ref|XP_004014947.1| PREDICTED: splicing factor 3B subunit 3 [Ovis aries]
 gi|417406150|gb|JAA49749.1| Putative damage-specific dna binding complex subunit ddb1 [Desmodus
            rotundus]
 gi|431912451|gb|ELK14585.1| Splicing factor 3B subunit 3 [Pteropus alecto]
          Length = 1217

 Score = 1485 bits (3844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1227 (58%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGDDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|432114152|gb|ELK36185.1| Splicing factor 3B subunit 3 [Myotis davidii]
          Length = 1217

 Score = 1485 bits (3844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1227 (58%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFANTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|449282569|gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]
          Length = 1225

 Score = 1484 bits (3843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/1235 (58%), Positives = 934/1235 (75%), Gaps = 37/1235 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKNVF+KIHQETFGKSGCRRIVPGQY
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILCCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV+++V DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D  GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPVGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E    +GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVE----MGGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGDEWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNSGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLF--------PNTIVSINTYRDR 996
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK+          N I  I T   R
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKILSFLSQKHIANYICGIQTIGHR 1007

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            + V D+QESF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP
Sbjct: 1008 VIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLP 1067

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIY 1116
             + +DE++EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y
Sbjct: 1068 PNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVY 1127

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLC 1176
             T+ G +G ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLC
Sbjct: 1128 TTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLC 1187

Query: 1177 EQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            EQF ++  + Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 1188 EQFNSMEPNKQKNVAEELDRTPPEVSKKLEDIRTR 1222


>gi|158256968|dbj|BAF84457.1| unnamed protein product [Homo sapiens]
          Length = 1217

 Score = 1483 bits (3840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1227 (58%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A E+QKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEEQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|410297890|gb|JAA27545.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
          Length = 1217

 Score = 1482 bits (3837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1227 (58%), Positives = 933/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAGDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|327286386|ref|XP_003227911.1| PREDICTED: splicing factor 3B subunit 3-like [Anolis carolinensis]
          Length = 1217

 Score = 1482 bits (3837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1227 (58%), Positives = 934/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKNVF+KIHQETFGKSGCRRIVPGQY
Sbjct: 61   IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILCCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV+++V DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGAEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S +RV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE +HKT VE 
Sbjct: 889  FSVAVCRFANTGDDWHVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFMHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRILIGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|46362557|gb|AAH68974.1| Splicing factor 3b, subunit 3, 130kDa [Homo sapiens]
          Length = 1217

 Score = 1481 bits (3835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1227 (58%), Positives = 933/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            F L QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FSLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|326676028|ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio]
 gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName: Full=Splicing factor 3B subunit 3
          Length = 1217

 Score = 1480 bits (3832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 720/1227 (58%), Positives = 931/1227 (75%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY++TLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNITLQRATGISHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RSL  FRLTG  KDY+VVGSDSGRIVILEY+PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VVRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMIGA EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMIGATEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SE ++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFKVTLE D E V+E+++KYFDTIPV  +MCVLK+G+LF +SEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++ ESL PIM  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDEQESLSPIMSCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTV+++V DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TI++   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIIRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGVEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGEKGTIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   +++IETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA S +W S +R+++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG A+ +   P R++  GYI+ YR V  G  LE LHKT VE 
Sbjct: 889  FSVAICRFLNGGDDWYVLVGVARDMILNP-RSVGGGYIYTYRIVGGGDKLEFLHKTPVED 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +PLA+  FQGR+L G+G +LR+YDLGKK+LLRKCENK  PN +  I+T   R+ V D+QE
Sbjct: 948  VPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  + +YRR+ENQL IFADD+ PRW+T A  +D+DTMA ADKFGNI  VRLP + SD+++
Sbjct: 1008 SLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNICVVRLPPNTSDDVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +H+G+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEIIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF HLEMHMR E PPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
              Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 HKQKSVSEELDRTPPEVSKKLEDIRTR 1214


>gi|6006515|emb|CAB56791.1| spliceosomal protein SAP 130 [Homo sapiens]
          Length = 1217

 Score = 1480 bits (3831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 720/1227 (58%), Positives = 932/1227 (75%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EA  D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEAGNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FF  QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFWAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVSKKLEDIRTR 1214


>gi|197101659|ref|NP_001125500.1| splicing factor 3B subunit 3 [Pongo abelii]
 gi|75042033|sp|Q5RBI5.1|SF3B3_PONAB RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=Spliceosome-associated
            protein 130; Short=SAP 130
 gi|55728259|emb|CAH90875.1| hypothetical protein [Pongo abelii]
          Length = 1217

 Score = 1479 bits (3830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1227 (58%), Positives = 932/1227 (75%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSE AVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSETAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA S +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGSGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K   ++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALRDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 NKQKNVSEELDRTPPEVTKKLEDIRTR 1214


>gi|348503892|ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like [Oreochromis niloticus]
          Length = 1217

 Score = 1476 bits (3822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 720/1227 (58%), Positives = 930/1227 (75%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY++TLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY+PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMIGA EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SE ++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFKVTLE D E V+E+++KYFDTIPV  +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++ E+L PIM  +IA+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTV+++V DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIV+   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLADNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGVEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGDKGTIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   +++IETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S +R+++P   +T   ++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPEAIFGSPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG A+ +   P R++  G+I+ YR V  G+ LE +HKT VE 
Sbjct: 889  FSVAACRFTNTGDDWYVLVGVARDMILNP-RSVGGGFIYTYRLVSGGEKLEFVHKTPVED 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +PLA+  FQGR L G+G +LR+YDLGKK+LLRKCENK  PN +  I+T   R+ V D+QE
Sbjct: 948  VPLAIAPFQGRALVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  + +YRR+ENQL IFADD+ PRW+T A  +D+DTMA ADKFGNI  VRLP + SD+++
Sbjct: 1008 SLFWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMAAADKFGNISIVRLPPNTSDDVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEIIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF HLEMHMR E PPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
              Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 1188 HKQKSVAEELDRTPPEVSKKLEDIRTR 1214


>gi|301604148|ref|XP_002931705.1| PREDICTED: splicing factor 3B subunit 3 [Xenopus (Silurana)
            tropicalis]
          Length = 1217

 Score = 1476 bits (3820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/1227 (58%), Positives = 933/1227 (76%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY++TLQ+ TGI  AI+GNFSGTK  EIVV+RGK++ELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNITLQRATGISFAIHGNFSGTKLQEIVVSRGKIIELLRPDANTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRI+ILEY+PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIIILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            +AVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  IAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++ +SL PIM  +IA+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDEQDSLSPIMSCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DE+DAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEYDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+ IVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKIIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PE+L  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPEALCIVEM----GGAERQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++ AG ++ Y+ V  G+ LE +HKT VE 
Sbjct: 889  FSVAVCRFTNTGDDWYVLVGVAKDLILNP-RSVAAGLVYTYKLVNNGEKLEFVHKTPVEE 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N IV I T   R+ + D+QE
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRIYDLGKKKLLRKCENKHISNFIVGIQTIGQRVILSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T +  +D+DT+AGADKFGNI  VRLP + +D+++
Sbjct: 1008 SFIWVRYKRNENQLIIFADDTYPRWVTTSCLLDYDTVAGADKFGNICIVRLPSNTNDDVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E IV +HVG+ V S+QK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIVNYHVGETVLSVQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPP+CGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHVEMHLRSEHPPICGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
              Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 1188 VKQKSVAEELDRTPPEVSKKLEDIRTR 1214


>gi|47087273|ref|NP_998668.1| splicing factor 3B subunit 3 [Danio rerio]
 gi|28502779|gb|AAH47171.1| Splicing factor 3b, subunit 3 [Danio rerio]
          Length = 1217

 Score = 1475 bits (3818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 718/1227 (58%), Positives = 930/1227 (75%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY++TLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNITLQRATGISHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RSL  FRLTG  KDY+VVGSDSGRIVILEY+PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VVRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVM+GA EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMMGATEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SE ++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFKVTLE D E V+E+++KYFDTIPV  +MCVLK+G+LF +SEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++ ESL PIM  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDEQESLSPIMSCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGP S+LR+LR GL VSEMAVS+LPG P+AVWTV+++V DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPGSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TI++   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIIRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGVEKQDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGEKGTICFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   +++IETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA S +W S +R+++P   NT  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG A+ +   P R++  GYI+ YR V  G  LE LHKT VE 
Sbjct: 889  FSVAICRFLNGGDDWYVLVGVARDMILNP-RSVGGGYIYTYRIVGGGDKLEFLHKTPVED 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +PLA+  FQGR+L G+G +LR+YDLGKK+LLRKCENK  PN +  I+T   R+ V D+QE
Sbjct: 948  VPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  + +YRR+ENQL IFADD+ PRW+T A  +D+DTMA ADKFGNI  VRLP + SD+++
Sbjct: 1008 SLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNICVVRLPPNTSDDVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +H+G+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEIIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF HLEMHMR E PPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
              Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1188 HKQKSVSEELDRTPPEVSKKLEDIRTR 1214


>gi|223647430|gb|ACN10473.1| Splicing factor 3B subunit 3 [Salmo salar]
          Length = 1217

 Score = 1469 bits (3804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 717/1227 (58%), Positives = 928/1227 (75%), Gaps = 29/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK++ELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGITHAIHGNFSGTKMQEIVVSRGKIIELLRPDANTGKVHTLLTMEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY+PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMIGA EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SE ++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFKVTLE D E V+E+++KYFDTIPV  SMCVLK+G+LF +SEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATSMCVLKTGFLFVSSEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++ E+L PIM  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGP+S+LR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIV+   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGVEKEDE 653

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654  LGVKGTVGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   +++IETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774  FNQVAFPLQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA S +W S +R+++P    T  L++L+ NEAA
Sbjct: 834  LA-AEMAAAFLNEN----LPEAIFGAPKAGSGQWASLVRLVNPIQGTTLDLVQLEQNEAA 888

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F        + VG A+ +   P R++  G+I+ YR    G  LE +HKT VE 
Sbjct: 889  FSVTVCRFASGGEDWYVLVGVARDMILNP-RSVGGGFIYTYRLGGGGDKLEFMHKTPVED 947

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +PLA+  FQGR+L G+G +LR+YDLGKK+LLRKCENK  PN +  I+T   R+ V D+QE
Sbjct: 948  VPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVTDVQE 1007

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  + +Y+R+ENQL IFADD+ PRW+T A  +D+DTMA ADKFGNI  VRLP + SD+++
Sbjct: 1008 SLFWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVD 1067

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +H+G+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKAEVIMNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1127

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF HLEMHMR E PPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1128 ILVPFTSHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDP 1187

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
              Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 1188 HKQKSVAEELDRTPPEVSKKLEDIRTR 1214


>gi|440792421|gb|ELR13643.1| splicing factor 3b subunit 3, putative [Acanthamoeba castellanii str.
            Neff]
          Length = 1227

 Score = 1464 bits (3791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1240 (58%), Positives = 914/1240 (73%), Gaps = 40/1240 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPEN-SGRIETLVSTEIFG 59
            M++Y+LTLQ+ T I  AI GNFS  K  EIVVARGKVLELLRP + +G+++T++S E+FG
Sbjct: 1    MHIYNLTLQRATAITHAIFGNFSAPKAQEIVVARGKVLELLRPNDFNGKVQTVLSVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+  FRLTG  +DYI+VGSDSGRIVIL+YN  +N FDKIHQETFGKSGCRRIVPGQY
Sbjct: 61   TIRSIVPFRLTGDTRDYIIVGSDSGRIVILQYNNERNTFDKIHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMIGA EKQKLVY+LNRD+AARLTISSPLEAHKSHTI   + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMIGAVEKQKLVYILNRDSAARLTISSPLEAHKSHTINIHMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFA +E+DY++ D D TG+      KNLTFYELDLGLNHV RKWSEPVD  ANMLV VPG
Sbjct: 181  IFATLEVDYADVDHDPTGKEFEALHKNLTFYELDLGLNHVVRKWSEPVDITANMLVAVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
            G DGP GVLV  ENFV++KNQGH +VRA +PRR  L  ER VLIVSA  H+QK LFF LL
Sbjct: 241  GSDGPGGVLVMGENFVVWKNQGHQEVRAALPRRKILGEERSVLIVSATAHKQKDLFFILL 300

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            Q+EYGDI+K TL  + ++VS +KI YFDT+P + +MC+LK+G+LF A+EFGNH L+QFQ+
Sbjct: 301  QSEYGDIYKATLAWEEDNVSAIKINYFDTVPTSNAMCILKTGFLFVAAEFGNHFLFQFQS 360

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            IG   D E  S+  M+ +E   P  F P+ LKNL+ I+++ESL PIMD ++A++ +EE  
Sbjct: 361  IG---DEEEEST--MDQDEDEIPT-FDPQPLKNLIAIDEIESLAPIMDFKVADMVKEETK 414

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            Q  TLCGRGPRSSLR+L+ GLAV+EMA S LPG P+ ++TV+KNV DE+D+YI+VSF NA
Sbjct: 415  QFLTLCGRGPRSSLRLLKHGLAVAEMADSPLPGNPNNIFTVRKNVADEYDSYIIVSFLNA 474

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
            TLVLSIG+ VEEV D+GF +   +L V L+GDDSL+QV P+GIR IR D RI EW TP +
Sbjct: 475  TLVLSIGDNVEEVKDAGFNENASTLNVGLVGDDSLVQVFPTGIRFIRSDKRITEWPTPAR 534

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            RTIV+   N  QVVIAL+GGEL+YFE+D+TG L+EV + +M  D+AC+DIA +PEGR R+
Sbjct: 535  RTIVRSAINNKQVVIALTGGELLYFELDITGSLVEVGRKDMGRDIACIDIAPIPEGRLRA 594

Query: 600  RFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
            RFLAVG Y+NT+R+LSLDP+D    L+VQ++ +PPESL  ++++   GG D +    +LF
Sbjct: 595  RFLAVGDYENTVRVLSLDPEDVFSSLAVQALPAPPESLCIVKMK---GGTDSS--AGTLF 649

Query: 660  LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYI 719
            LN GL NGVL RTV+D VTG+LSD+R+RFLG RP +L  + VG + AML L+SR WL Y 
Sbjct: 650  LNIGLTNGVLQRTVLDKVTGELSDTRTRFLGSRPVRLLKLRVGDQPAMLALTSRAWLCYN 709

Query: 720  HRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYT 779
            ++    LTPLSY  L+YA++F S++C EG+V+  GNALR+ + ERLGE F++  +PLRYT
Sbjct: 710  YQLHLHLTPLSYPALDYASNFCSERCPEGMVATIGNALRIISPERLGEVFHQELIPLRYT 769

Query: 780  PRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA---------------------- 817
            PR+ ++ P    ++ IETD     A  +   ++   EA                      
Sbjct: 770  PRKMLVYPTTGNLITIETDHNTYPALIQGGLRQRLLEAQQEPSAAAADGDSGAVKKEKEE 829

Query: 818  ----AGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT 873
                    +     M ++E    E      S   +G  K    KW SC+R+LD  +  T 
Sbjct: 830  EMETEDGEKTKEAKMGKLEELQREQAEREESARVFGTEKPGVGKWASCVRLLDVNTKQTI 889

Query: 874  CLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKS 933
             ++EL +NEAAFS CT  FHD+     L VGTAKGL   P R+  AGYIH+YR ++ GK 
Sbjct: 890  DVVELDNNEAAFSACTCVFHDRGGEIFLVVGTAKGLVLNP-RSCDAGYIHVYRLLDGGKR 948

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTY 993
              L+HKTQVEG+P A+C FQGRLL GIG +LR+YDLGK++LLRKCENK FP+ I SI T 
Sbjct: 949  FSLVHKTQVEGVPTAVCGFQGRLLVGIGKMLRIYDLGKRKLLRKCENKGFPHCIQSITTQ 1008

Query: 994  RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
             +RI VGD+ ESFHF KYR+ ENQL ++ADDS PRWLTA+  +D+DTMAGADKFGN++ V
Sbjct: 1009 GERIIVGDLAESFHFVKYRKAENQLNVYADDSNPRWLTASQMLDYDTMAGADKFGNVFIV 1068

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES 1113
            RLP +V++E+E++P G  +  +Q  LNGA  K++ ++ FHVGD + S+ KASL  GG + 
Sbjct: 1069 RLPSEVNEELEDNPMGNFLMSKQ-SLNGAAFKLQTLINFHVGDTINSMTKASLFTGGADV 1127

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDG 1173
            ++Y T+MG +GA+L F SR+DVDFFSHLEMHMR E PPLCGRDH+AYRS YFPVKDVIDG
Sbjct: 1128 LVYTTLMGGMGALLPFVSREDVDFFSHLEMHMRSELPPLCGRDHLAYRSYYFPVKDVIDG 1187

Query: 1174 DLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            DLCEQF  L  + QR IA+ELDRTPGE+LKKLE IRN I+
Sbjct: 1188 DLCEQFSLLPPEKQRTIAEELDRTPGEVLKKLEVIRNSIL 1227


>gi|443694993|gb|ELT96001.1| hypothetical protein CAPTEDRAFT_155561 [Capitella teleta]
          Length = 1215

 Score = 1461 bits (3782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 702/1222 (57%), Positives = 924/1222 (75%), Gaps = 19/1222 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  A +GNFSGTK  EI+V+RGKVLELLRP+ N+G++ TL+++E+FG
Sbjct: 1    MFLYNLTLQRATGITHAAHGNFSGTKQQEIIVSRGKVLELLRPDPNTGKVHTLLTSEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYI++GSDSGRIVILEY  SKN+F+KI QET+GKSGCRRIVPGQ 
Sbjct: 61   VIRSLMPFRLTGGSKDYIILGSDSGRIVILEYVASKNIFEKIQQETYGKSGCRRIVPGQQ 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DP+GRAVM+GA EKQKLVY+LNRD  ARLTISSPLEAHK++T+ Y + G+D GF+NP
Sbjct: 121  LAIDPRGRAVMVGAVEKQKLVYILNRDAQARLTISSPLEAHKANTLGYYMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FA +E+DY EAD D TG++AS+ Q+ LT+YELDLGLNHV RK+SEP++  ANML++VPG
Sbjct: 181  TFACLEVDYEEADSDPTGESASKLQQMLTYYELDLGLNHVVRKYSEPLEEHANMLISVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G +GPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V  ATH+ K++F
Sbjct: 241  GSEGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCNATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GD+FK+TLE D + V+E+++KYFDT+PV +SMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLTQTEQGDVFKITLETDEDMVTEVRLKYFDTVPVASSMCVLKTGFLFIASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR LKNLV +++++SL PIM  +IA+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRPLKNLVMVDEMDSLSPIMHCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ+F +CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK+N+ DEFDAYI+VS
Sbjct: 418  EDTPQLFAMCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRNIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +GDD+L+Q++P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIV+   N+ QVVIALSGGEL+YFE+D TGQL E  E+ E+S DV C+ +  VP 
Sbjct: 538  TPGKKTIVRCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKELSSDVVCMGLGRVPS 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +R RFLAVG  DNT+RI+SLDP DC+  LS+Q++ + PESL  +E+  +V G++ A  
Sbjct: 598  GEQRCRFLAVGLNDNTVRIISLDPTDCLSPLSMQALPASPESLCIVEMGGAVEGQEEAHI 657

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
               LFLN GLQNGVL R V+D VTG LSD+R+R+LG RP KLF + + G  ++L +SSR 
Sbjct: 658  NHGLFLNIGLQNGVLLRAVLDNVTGDLSDTRTRYLGSRPVKLFRISMQGSDSVLAMSSRS 717

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            WL Y ++ RF LTPLSY+TLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  FN+ ++
Sbjct: 718  WLSYTYQNRFHLTPLSYDTLEYASGFASEQCPEGIVAISTNTLRILALEKLGAIFNQVSI 777

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK----ECFEAAGMGENGNGNMDQ 830
            PL+YTPR+FV+  +   +++IE+D  A T + ++  K+    E  EAAG  E      + 
Sbjct: 778  PLQYTPRKFVIHAETGNVIVIESDHNAYTEDTKQQRKQQMAEEMVEAAGEEEQQLA-AEM 836

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTV 890
                  EN    L ++ +G PKA +  W S I++++P +  T C L L+ NEAAFS+  V
Sbjct: 837  AAAFLQEN----LPEDVFGAPKAGNGMWASQIQIMNPINGKTLCKLPLEQNEAAFSVSIV 892

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
             F +      + VGT K L   P R+   GYI  +RF    + LELLH+T V+ +P A+ 
Sbjct: 893  RFANHGDEAFVLVGTVKDLVLSP-RSCSCGYILCFRFTNNYEGLELLHRTPVDDVPAAIA 951

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
             FQGR+L G+G  LR+YDLGKK++LRKCENK  PN + +I+   +RI V DIQ+SFHF +
Sbjct: 952  AFQGRVLIGVGRHLRIYDLGKKKMLRKCENKFLPNFVTAIHVNGNRIMVSDIQDSFHFVR 1011

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            Y+R ENQL +FADD+ PRWLT +  +D++TMAGADKFGNI  VRLP + +D+++EDPTG 
Sbjct: 1012 YKRHENQLIVFADDTCPRWLTCSCMLDYNTMAGADKFGNICVVRLPSNATDDVDEDPTGN 1071

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFS 1130
            K  W++G LNGA  K + I  FHVG+++TSLQKA+L+PGG ES++Y T+ GSLG ++ FS
Sbjct: 1072 KALWDRGSLNGASQKADSIANFHVGEMITSLQKATLIPGGSESLVYTTLSGSLGMLVPFS 1131

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
            S +D DFF HLEMHMR E   LCGRDH+AYRS YFPV++VIDGDLCE F ++ +  Q++I
Sbjct: 1132 SHEDHDFFQHLEMHMRSEVQSLCGRDHLAYRSYYFPVRNVIDGDLCEMFTSMDVSRQKQI 1191

Query: 1191 ADELDRTPGEILKKLEEIRNKI 1212
            ++ELDRTP E+ KKLE+ R + 
Sbjct: 1192 SEELDRTPAEVSKKLEDTRTRF 1213


>gi|348572800|ref|XP_003472180.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
            [Cavia porcellus]
          Length = 1215

 Score = 1456 bits (3768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/1227 (58%), Positives = 926/1227 (75%), Gaps = 31/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360  QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+V  
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVSP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRF   G +    RI+S DP DC+Q LS+Q++ + PESL  +E+    GG +  D 
Sbjct: 598  GEQRSRFPGCGLW-TYCRIIS-DPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDE 651

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 652  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 711

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 712  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 771

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 772  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 831

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 832  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 886

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 887  FSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 945

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QE
Sbjct: 946  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQE 1005

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            SF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++
Sbjct: 1006 SFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVD 1065

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G
Sbjct: 1066 EDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIG 1125

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  
Sbjct: 1126 ILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEP 1185

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
            + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1186 NKQKNVSEELDRTPPEVSKKLEDIRTR 1212


>gi|405970223|gb|EKC35151.1| Splicing factor 3B subunit 3 [Crassostrea gigas]
          Length = 1217

 Score = 1452 bits (3758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1224 (56%), Positives = 930/1224 (75%), Gaps = 23/1224 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  A++GNFSG+K  EI+V+RGK+LELLR + N+G+I  ++S E+FG
Sbjct: 1    MFLYNLTLQRATGITCAVHGNFSGSKLQEIIVSRGKILELLRHDPNTGKIYPVLSVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDY+VVGSDSGRIVILEY   KN+F+K+HQETFGKSGCRRIVPGQY
Sbjct: 61   MIRSLMPFRLTGGSKDYVVVGSDSGRIVILEYIAQKNIFEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMIGA EKQKLVY+LNRD +ARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMIGAVEKQKLVYILNRDASARLTISSPLEAHKANTLVYHMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FA +E+DY EAD D TG+ A   Q+ LT+YELDLGLNHV RK+SE ++  AN L++VPG
Sbjct: 181  TFACLEIDYEEADMDHTGEGAKNTQQLLTYYELDLGLNHVVRKYSESLEEHANFLISVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNLGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+ +KYFDT+PV A+MCVLKSG+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIILKYFDTVPVAANMCVLKSGFLFIASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+  + EEG +P FF PR LKNLV++++++SL PI   +IA+L  
Sbjct: 360  QIAQLG-DDDEEPRFSSASQLEEG-EPHFFSPRPLKNLVQVDEMDSLSPITHCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++TLCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKKN++DEFDAYI+VS
Sbjct: 418  EDTPQLYTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKNIDDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +GDD+L+Q++P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK++IVK   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ EMS +V C+ +  VP 
Sbjct: 538  TPGKKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSSEVVCMALGRVPV 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +R RFLAVG  DNT+RI+SLDP DC+  LS+Q++  P ESL  +E+  +   E+  + 
Sbjct: 598  GEQRCRFLAVGLSDNTVRIISLDPSDCLSPLSMQALPEPSESLCIVEMGGTEAKEETGE- 656

Query: 655  PAS---LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
            P +   LFLN GLQNGVL RTV+D VTG LSD+R+R+LG+RP KLF + + G  A+L +S
Sbjct: 657  PGTVGGLFLNIGLQNGVLLRTVLDNVTGDLSDTRTRYLGVRPVKLFRISMQGSEAVLAMS 716

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            SR WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  FN+
Sbjct: 717  SRSWLSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQ 776

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENGNGN 827
             + PL++TPR+FV+ P+   +++IET+  A T     E ++   +E  E     E     
Sbjct: 777  VSHPLQHTPRKFVIHPETNNLIVIETEYNAYTEATKMERKQQMAEEMVEMVS-AEEREMA 835

Query: 828  MDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
             +   N  +E +    S+  +G PKA    W S IR+++P S NT   ++L+ NE+  SI
Sbjct: 836  AEMAANFLNEER----SESIFGAPKAGPGMWASIIRIINPISGNTLEKIQLEQNESVHSI 891

Query: 888  CTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
              + F  +     + VG A+ L   P R++  G++++Y+  + G+SL+LLHKT VE +P 
Sbjct: 892  ALLKFASRGDDQFVLVGVARDLVLNP-RSLTGGFLYLYQLEDGGESLKLLHKTPVEDVPG 950

Query: 948  ALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFH 1007
            A+  FQGR+L G+G  LR+YD+GKK++LRKCENK  PN + +I+T  +RI   D+Q+SFH
Sbjct: 951  AIASFQGRVLIGVGRYLRIYDIGKKKMLRKCENKSIPNYVSAIHTVGNRIIASDVQDSFH 1010

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDP 1067
            F +Y+R ENQL +FADD+ PRW+TA+  +D++T+AGADKFGNI  +RLP DVSD+++EDP
Sbjct: 1011 FVRYKRQENQLIVFADDTNPRWITASCSLDYNTVAGADKFGNITIIRLPGDVSDDVDEDP 1070

Query: 1068 TGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAML 1127
            TG K  W++G LNGA  K + ++ FH+G++VTSLQKA+L+PGG ES++Y T+ G +G ++
Sbjct: 1071 TGNKALWDRGLLNGASQKADVMMNFHLGEMVTSLQKATLIPGGSESLVYTTLSGGIGMLV 1130

Query: 1128 AFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQ 1187
            AF+S +D DFF HLEM+MR EHPPLCGRDH+++RS Y+PVK+VIDGDLCE F ++    Q
Sbjct: 1131 AFTSHEDHDFFQHLEMYMRTEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEMFNSMDPVKQ 1190

Query: 1188 RKIADELDRTPGEILKKLEEIRNK 1211
            + +++ELDRTP E+ KKLE+IR +
Sbjct: 1191 KSVSEELDRTPSEVSKKLEDIRTR 1214


>gi|332263858|ref|XP_003280968.1| PREDICTED: splicing factor 3B subunit 3 [Nomascus leucogenys]
          Length = 1271

 Score = 1449 bits (3752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/1231 (58%), Positives = 926/1231 (75%), Gaps = 33/1231 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL+  E+FG
Sbjct: 51   MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLIVEVFG 110

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FR+TG  K+YIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 111  VIRSLMAFRVTGGTKEYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 170

Query: 120  LAVDPKGRAVMIGAC-EKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            LAVDPKGRAVMI  C EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+N
Sbjct: 171  LAVDPKGRAVMISKCHEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFEN 230

Query: 179  PIFAAIELDYSEAD---QDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLV 235
            P+FA +E+DY   D     S       +Q+ LTFYELDLGLNHV RK+SEP++   N L+
Sbjct: 231  PMFACLEMDYEIFDCMPLISFYATVLCSQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLI 290

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQ 291
            TVPGG DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ 
Sbjct: 291  TVPGGSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKT 349

Query: 292  KTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            K++FFFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGN
Sbjct: 350  KSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGN 409

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
            H LYQ   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA
Sbjct: 410  HYLYQIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIA 467

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            +L  E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAY
Sbjct: 468  DLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAY 527

Query: 472  IVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI 531
            I+VSF NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+
Sbjct: 528  IIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRV 587

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIA 590
            NEW+TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A
Sbjct: 588  NEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLA 647

Query: 591  SVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGED 650
            +VP G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +
Sbjct: 648  NVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTE 703

Query: 651  GADHPAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
              D          L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+
Sbjct: 704  KQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQ 763

Query: 705  AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
             A+L +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+
Sbjct: 764  EAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEK 823

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGM 820
            LG  FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG 
Sbjct: 824  LGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGE 883

Query: 821  GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
             E      +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ 
Sbjct: 884  DERELA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQ 938

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAAFS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT
Sbjct: 939  NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKT 997

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
             VE +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V 
Sbjct: 998  PVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVS 1057

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+QESF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +
Sbjct: 1058 DVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTN 1117

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            DE++EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ 
Sbjct: 1118 DEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLS 1177

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G +G ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF 
Sbjct: 1178 GGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFN 1237

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            ++  + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1238 SMEPNKQKNVSEELDRTPPEVSKKLEDIRTR 1268


>gi|109129162|ref|XP_001107025.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Macaca
            mulatta]
 gi|297284421|ref|XP_002802591.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Macaca
            mulatta]
          Length = 1199

 Score = 1448 bits (3749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/1199 (58%), Positives = 911/1199 (75%), Gaps = 29/1199 (2%)

Query: 29   EIVVARGKVLELLRPE-NSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIV 87
            EIVV+RGK+LELLRP+ N+G++ TL++ E+FG IRSL  FRLTG  KDYIVVGSDSGRIV
Sbjct: 11   EIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGGTKDYIVVGSDSGRIV 70

Query: 88   ILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDT 147
            ILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+LAVDPKGRAVMI A EKQKLVY+LNRD 
Sbjct: 71   ILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMISAIEKQKLVYILNRDA 130

Query: 148  AARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNL 207
            AARLTISSPLEAHK++T+VY + G+D GF+NP+FA +E+DY EAD D TG+AA+  Q+ L
Sbjct: 131  AARLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEADNDPTGEAAANTQQTL 190

Query: 208  TFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQG-HPDVR 266
            TFYELDLGLNHV RK+SEP++   N L+TVPGG DGPSGVL+C+EN++ YKN G  PD+R
Sbjct: 191  TFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGSDGPSGVLICSENYITYKNFGDQPDIR 250

Query: 267  AVIPRR---ADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKI 323
              IPRR    D P ERG++ V +ATH+ K++FFFL QTE GDIFK+TLE D + V+E+++
Sbjct: 251  CPIPRRRNDLDDP-ERGMIFVCSATHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRL 309

Query: 324  KYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPV 383
            KYFDT+PV A+MCVLK+G+LF ASEFGNH LYQ   +G D D E   S+ M  EEG    
Sbjct: 310  KYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDD-DEEPEFSSAMPLEEG-DTF 367

Query: 384  FFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVS 443
            FFQPR LKNLV +++++SL PI+  +IA+L  E+ PQ++  CGRGPRSSLR+LR GL VS
Sbjct: 368  FFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVS 427

Query: 444  EMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPS 503
            EMAVS+LPG P+AVWTV++++ DEFDAYI+VSF NATLVLSIGETVEEV+DSGFL TTP+
Sbjct: 428  EMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPT 487

Query: 504  LAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIY 563
            L+ SL+GDD+L+QV+P GIRHIR D R+NEW+TPGK+TIVK   N+ QVVIAL+GGEL+Y
Sbjct: 488  LSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVY 547

Query: 564  FEVDMTGQLLE-VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCM 622
            FE+D +GQL E  E+ EMS DV C+ +A+VP G +RSRFLAVG  DNT+RI+SLDP DC+
Sbjct: 548  FEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCL 607

Query: 623  QILSVQSVSSPPESLLFLEVQASVGGEDGADHPAS------LFLNAGLQNGVLFRTVVDM 676
            Q LS+Q++ + PESL  +E+    GG +  D          L+LN GLQNGVL RTV+D 
Sbjct: 608  QPLSMQALPAQPESLCIVEM----GGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDP 663

Query: 677  VTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEY 736
            VTG LSD+R+R+LG RP KLF V + G+ A+L +SSR WL Y ++ RF LTPLSYETLE+
Sbjct: 664  VTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEF 723

Query: 737  AASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIE 796
            A+ F+S+QC EG+V+++ N LR+  +E+LG  FN+ A PL+YTPR+FV+ P+   ++IIE
Sbjct: 724  ASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIE 783

Query: 797  TDQGALT----AEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPK 852
            TD  A T    A+ ++   +E  EAAG  E      +      +EN    L +  +G PK
Sbjct: 784  TDHNAYTEATKAQRKQQMAEEMVEAAGEDERELA-AEMAAAFLNEN----LPESIFGAPK 838

Query: 853  AESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFW 912
            A + +W S IRV++P   NT  L++L+ NEAAFS+    F +      + VG AK L   
Sbjct: 839  AGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILN 898

Query: 913  PKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKK 972
            P R++  G+++ Y+ V  G+ LE LHKT VE +P A+  FQGR+L G+G +LR+YDLGKK
Sbjct: 899  P-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKK 957

Query: 973  RLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTA 1032
            +LLRKCENK   N I  I T   R+ V D+QESF + +Y+R+ENQL IFADD+ PRW+T 
Sbjct: 958  KLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTT 1017

Query: 1033 AHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQF 1092
            A  +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W++G LNGA  K E I+ +
Sbjct: 1018 ASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNY 1077

Query: 1093 HVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPL 1152
            HVG+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +D DFF H+EMH+R EHPPL
Sbjct: 1078 HVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPL 1137

Query: 1153 CGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            CGRDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1138 CGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTR 1196


>gi|321478392|gb|EFX89349.1| hypothetical protein DAPPUDRAFT_303178 [Daphnia pulex]
          Length = 1215

 Score = 1443 bits (3735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/1224 (57%), Positives = 909/1224 (74%), Gaps = 25/1224 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TGII A+ GNFSGTK  EIV+ARGKVLE+++P+ N+G++ TL+S E+FG
Sbjct: 1    MYLYNLTLQRATGIIQAVQGNFSGTKQQEIVIARGKVLEIVKPDPNTGKVHTLLSQEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+  FRLTG  KDY+VVGSDSGRIVILEYN +KNVFDK+HQET+GKSGCRRIVPGQY
Sbjct: 61   IIRSIISFRLTGGNKDYLVVGSDSGRIVILEYNAAKNVFDKVHQETYGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            +A+DPKGRAVMI A EKQKLVY+LNRD  A LTISSPLEAHKS+T+VY+I G+D GF+NP
Sbjct: 121  MAIDPKGRAVMISAIEKQKLVYILNRDAQAHLTISSPLEAHKSNTLVYNIVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA + Q+ LTFYELDLGLNHV RK+SEP+D  AN L+TVPG
Sbjct: 181  VFACLEMDYEEADGDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLDEHANFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVLVC+EN++ YKN G   D+R  IPRR    D P ERG++ V +A+HR K +F
Sbjct: 241  GNDGPSGVLVCSENYITYKNLGEQHDIRCPIPRRRNDLDDP-ERGMIFVCSASHRTKAMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QTE GDIFK+T++ D E V ELKIKYFDT+PV++SMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLVQTEQGDIFKITMDMDEEVVRELKIKYFDTVPVSSSMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D    SST+   EEG    FF PR LKNLV ++++ESL P++   IA+L  
Sbjct: 360  QIAHLGDDDDEPEFSSTI-PLEEG-DTFFFAPRPLKNLVLVDEMESLSPVLACHIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGR  RSSLR+LR GL VSEMAVS+LPG P+AVWTV+K  +DEFDAYIVVS
Sbjct: 418  EDTPQLYALCGRSSRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRKRADDEFDAYIVVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  S +GD++L+QV+P GIRHIR D RINEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLGCSSLGDNALLQVYPEGIRHIRADRRINEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            +PGKR I +   N+ QVVI+L+GGEL+YFE+D TGQL E  E+ EM+ +V C+ +A+VP 
Sbjct: 538  SPGKRAISRCAVNQRQVVISLAGGELVYFEMDPTGQLNEYTERKEMTAEVVCMALANVPS 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+R++SLDP+DC+  LS+Q++ + PESL  +E+       +    
Sbjct: 598  GEQRSRFLAVGLADNTVRVISLDPNDCLTPLSMQALPATPESLCIVEMGGHDKDSETTGT 657

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
               LFLN GLQNGVL RTV+D VTG L+D+R+R+LG RP KLF V+     A+L +SSR 
Sbjct: 658  SGQLFLNIGLQNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRVMTQNHEAVLAISSRT 717

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            WL Y  + RF L PLSY++LE+A+ F+S+QC EGVV++A N LR+  +E+LG  FN+ + 
Sbjct: 718  WLSYYFQNRFHLAPLSYDSLEFASGFASEQCPEGVVAIASNTLRILALEKLGAVFNQVSY 777

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALTAE----EREAAKKECFEAAGMGEN--GNGNM 828
            PL YTPR+FV+    + M+IIETD  A T E     R+   +E  +AA   E    +   
Sbjct: 778  PLEYTPRKFVVHDSGR-MIIIETDHNAYTLETKLERRQQIAQEMRDAATEEEQELAHQMA 836

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
            D   N D       L +  +G PKA +  W S +R++DP S N+   + L  NEAA SI 
Sbjct: 837  DAFLNED-------LPESDFGAPKAGAGMWASIVRIMDPTSGNSLHTIRLPQNEAALSIG 889

Query: 889  TVNFHDKE-HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
               F +++     + VG AK L+  PK+    G+I+ Y+ + E  +LE +HKT VE  P 
Sbjct: 890  LARFMNQDPEDYFVLVGVAKDLKLNPKQ-CDGGFIYTYKLINEWSALEFVHKTPVEDTPY 948

Query: 948  ALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFH 1007
            A+C +QGR+L G+G +LRLYD+GKK+LLRKCENK  P+ +V+I     R+YV D+QES H
Sbjct: 949  AICAYQGRVLIGVGRLLRLYDMGKKKLLRKCENKHLPSCVVNIQALGQRVYVADVQESIH 1008

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDP 1067
            F +Y+R ENQL IFADD+ PR++T    +D+DT+A ADKFGNI  +RLP   SD+++EDP
Sbjct: 1009 FVRYKRMENQLIIFADDTHPRYVTTMCLLDYDTVAVADKFGNISVLRLPSRTSDDVDEDP 1068

Query: 1068 TGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAML 1127
            TG K  W++G LNGA NK E +   H+G+   SLQ+A+L+PGG ES++Y T+ GS+G ++
Sbjct: 1069 TGNKSFWDRGVLNGASNKAEVLCNIHIGETALSLQRATLIPGGSESLVYTTLSGSIGVLV 1128

Query: 1128 AFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQ 1187
             F+SR+D DFF  LEMH+R EHPPLCGRDH+A+RS YFPVK+VIDGDLCEQF ++    Q
Sbjct: 1129 PFTSREDHDFFQALEMHLRSEHPPLCGRDHLAFRSFYFPVKNVIDGDLCEQFNSIDSSKQ 1188

Query: 1188 RKIADELDRTPGEILKKLEEIRNK 1211
            + +AD+LDR P E+ KKLE+IR +
Sbjct: 1189 KAVADDLDRAPNEVSKKLEDIRTR 1212


>gi|242018509|ref|XP_002429717.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
 gi|212514723|gb|EEB16979.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
          Length = 1218

 Score = 1442 bits (3733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1225 (56%), Positives = 916/1225 (74%), Gaps = 24/1225 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  A++GNFSG+K  EI+V+RGK LELLRP+ N+G++ TL++ EIFG
Sbjct: 1    MHLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY P+KN+F+K+HQETFGKSGCRRIVPGQY
Sbjct: 61   VIRSLMSFRLTGGTKDYIVVGSDSGRIVILEYIPAKNLFEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVM+GA EKQKLVY+LNRD  ARLTISSPLEAHKS+T+VY + G+D GF+NP
Sbjct: 121  LAIDPKGRAVMVGAVEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AAS+ Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADTDPTGEAASKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSVF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDT+PV  SMCV+K+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATSMCVMKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV++++++SL PIM  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRALRNLVQVDEMDSLSPIMACQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK+ V +E+DAYI+VS
Sbjct: 418  EDTPQLYMLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVEEEYDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TI+K   N+ QVVIAL+ GEL+YFE+D TGQL E  E+  M  DV+C+ + +V  
Sbjct: 538  APGKKTIMKCAVNQRQVVIALTAGELVYFEMDPTGQLNEYTERKAMPSDVSCMALGNVVP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G  RSRFLAVG  DNT+RI+SLDP DC+  LS+Q++ +  ESL  +E+ A+    D  + 
Sbjct: 598  GELRSRFLAVGLADNTVRIISLDPSDCLSPLSMQALPAAAESLCIVEMGAADKKPDSEES 657

Query: 655  P---ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
                ++L+LN GLQNGVL RTV+D VTG L+D+R+R+LG RP KLF + + G  A+L +S
Sbjct: 658  TVTQSNLYLNVGLQNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMS 717

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            SR WL Y ++ RF LTPLSYE+LEYA+ FSS+QC EG+V+++ N LR+  +E+LG  FN+
Sbjct: 718  SRSWLSYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQ 777

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAK----KECFEAAGMGENGNGN 827
             + PL YTPR+FV+ P+   M+++ET+  A T E ++  +    +E  EAAG  E     
Sbjct: 778  ISFPLEYTPRKFVVHPETGKMILLETEHNAYTEETKKQRRVQMAEEMQEAAGDEEQELAK 837

Query: 828  -MDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFS 886
             M +    +D      L +  +G PKA S  W S IR++DP    T  ++ L+ NEAA S
Sbjct: 838  EMAEAFLSED------LPESIFGAPKAGSGMWASIIRIIDPVEGRTDKIVRLEQNEAALS 891

Query: 887  ICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIP 946
            I  V F++      L VG  K  Q  P R +  GY++ +R  E+   LEL+HKT V+  P
Sbjct: 892  IALVKFNNHPESLFLVVGVVKEYQLSP-RQVSFGYLYTFRINEDVTDLELVHKTTVDEAP 950

Query: 947  LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESF 1006
             A+C + GRLL G+G +LRLYDLGKK+LLRKCENK  PN IVSI     R++V D+QES 
Sbjct: 951  AAVCPYHGRLLVGVGRMLRLYDLGKKKLLRKCENKYIPNQIVSICATGQRVFVSDVQESV 1010

Query: 1007 HFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEED 1066
            +  +Y+R ENQL IFADD+ PRW+T    +D+DT+A ADKFGNI  +RL   ++D+++ED
Sbjct: 1011 YMVRYKRQENQLIIFADDTHPRWITCTTILDYDTVATADKFGNIAIIRLSSIITDDVDED 1070

Query: 1067 PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAM 1126
            PTG K  W++G LNGA  K + +  FHVG+   SLQKA+L+PGG ES++Y ++ G++G +
Sbjct: 1071 PTGNKALWDRGLLNGASQKADVLANFHVGETCMSLQKATLIPGGSESLVYTSLSGTVGVL 1130

Query: 1127 LAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDL 1186
            + F+SR+D DFF HLEMHMR EHPPLCGRDH+++RS Y+PVK+VIDGDLCEQ+ ++    
Sbjct: 1131 VPFTSREDHDFFQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQYNSIEPAK 1190

Query: 1187 QRKIADELDRTPGEILKKLEEIRNK 1211
            Q+ IA++LDR P ++ KKLE+IR +
Sbjct: 1191 QKSIAEDLDRNPSDVSKKLEDIRTR 1215


>gi|427798971|gb|JAA64937.1| Putative damage-specific dna binding complex subunit ddb1, partial
            [Rhipicephalus pulchellus]
          Length = 1259

 Score = 1432 bits (3706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1207 (57%), Positives = 895/1207 (74%), Gaps = 22/1207 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+ TLQ+ TGI  A++GNFSGTK  E+ V+RGK+LELLRP+ N+G++ TL + E+FG
Sbjct: 1    MYLYNFTLQRATGITHAVHGNFSGTKLQEVAVSRGKILELLRPDPNTGKVYTLYACEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+  FRLTG  KDY+VVGSDSGRIVILEYNP K+ F+K+HQETFGKSGCRRIVPGQ+
Sbjct: 61   IIRSMMSFRLTGGSKDYLVVGSDSGRIVILEYNPQKSCFEKVHQETFGKSGCRRIVPGQH 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRA+M+ A EKQKLVY+LNRD AARLTISSPLEAHKS T+VY   G+D GF+NP
Sbjct: 121  LAMDPKGRALMVAAVEKQKLVYILNRDAAARLTISSPLEAHKSSTLVYHCVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G+AA+   + LTFYELDLGLNHV RK+SEP++   N L+ VPG
Sbjct: 181  VFACLEMDYEEADSDPSGEAANNTHQTLTFYELDLGLNHVVRKYSEPLEEHGNFLIAVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +A H+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSANHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDTIPV ASMCVLK+G+LF A+EFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTIPVAASMCVLKTGFLFVAAEFGNHCLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G + D E   S+ +  EEG    FF PR L+NL+ +E+++SL P M   IA+L  
Sbjct: 360  QIARLGEE-DEEPEFSSAIPLEEG-DTFFFAPRALRNLLPVEELDSLSPAMGCTIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS +R+LR GL VSEMAVS+LPG P+AVWTVK+  ++++DAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSCIRVLRHGLEVSEMAVSELPGNPNAVWTVKRKADEDYDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ + IGDD+L+QV+P GIRHIR D R+NEWR
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCAQIGDDALVQVYPEGIRHIRADKRVNEWR 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+ IVK   N+ QVVIAL+GGEL+YFE+D TGQL E  ++ EMS D+ C+ +ASVP 
Sbjct: 538  TPGKKAIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTDRREMSADIICMSLASVPT 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+  LS+Q++ + PESL  +E+  +     G   
Sbjct: 598  GEQRSRFLAVGLADNTVRIISLDPSDCLSPLSMQALPATPESLSIVEMGMTEVETTGQ-- 655

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
               L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G  A L +SSR 
Sbjct: 656  -GILYLNIGLQNGVLLRTVLDQVTGDLSDTRTRYLGSRPVKLFKVRMQGSDAALAMSSRS 714

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            WL Y ++ RF LTPLSYETLE+A+ FSS+QC EG+V+++ N LR+  +E+LG  FN+ + 
Sbjct: 715  WLSYYYQNRFHLTPLSYETLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVST 774

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK----ECFEAAGMGENGNGNMDQ 830
             L YTPR+FV+      ++I+ETD  A T + ++  K+    E  EAAG GE      + 
Sbjct: 775  TLEYTPRKFVVNSDSGHLIIVETDHNAYTEKMKQQRKQQMAEEMVEAAGEGEQ-----EL 829

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTV 890
                      + L +  +G PKA S  W S IRVL+P  + T C + L+ NEAA S+  V
Sbjct: 830  AAEMAAAFLSEVLPETVFGSPKAGSGMWASVIRVLNPADSQTLCKVALEQNEAALSVALV 889

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKS-LELLHKTQVEGIPLAL 949
             F  +     + VG A+ L   P      G +  YR    G++ LEL+H T VE  P AL
Sbjct: 890  KFASQPDEQYVVVGAARELSLQPWHARSGGLLLTYRLSHAGETRLELVHATSVEEAPTAL 949

Query: 950  CQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFC 1009
            C FQGRLLAG+G  LRLYDLG+K+LLRKCENK  P+ IVSI +  +R+ VGD+QESF F 
Sbjct: 950  CPFQGRLLAGVGKCLRLYDLGRKKLLRKCENKYIPSAIVSIQSMGNRVVVGDVQESFFFL 1009

Query: 1010 KYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTG 1069
            +Y+R ENQL IFADD+VPRW+TA+  +D+DT+AGADKFGN+  +RLP  VSDE++EDPTG
Sbjct: 1010 RYKRQENQLVIFADDAVPRWITASCMLDYDTVAGADKFGNVSIIRLPNSVSDEVDEDPTG 1069

Query: 1070 GKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAF 1129
             K  W++G L G+  K E I  FH+G+ V SLQKA+L+PGG ES++Y T+ G++G ++ F
Sbjct: 1070 IKSLWDRGWLGGSSQKAEVISNFHIGETVLSLQKATLIPGGSESLVYVTLSGTIGVLVPF 1129

Query: 1130 SSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRK 1189
            ++ +D DFF HLEMHMR E+PPLCGRDH+++RS+YFPVK+VIDGDLCEQF +L    Q+ 
Sbjct: 1130 TAHEDHDFFQHLEMHMRSENPPLCGRDHLSFRSSYFPVKNVIDGDLCEQFNSLDPSKQKS 1189

Query: 1190 IADELDR 1196
            IA+ELDR
Sbjct: 1190 IAEELDR 1196


>gi|31213215|ref|XP_315551.1| AGAP005549-PA [Anopheles gambiae str. PEST]
 gi|21299714|gb|EAA11859.1| AGAP005549-PA [Anopheles gambiae str. PEST]
          Length = 1217

 Score = 1425 bits (3688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1226 (56%), Positives = 906/1226 (73%), Gaps = 27/1226 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+  LQ+ TGI  A++G+F+GTK  EI++A+GK LEL+RP+ N+G++ TL+ TE+FG
Sbjct: 1    MYLYNFILQRATGITHAVHGSFAGTKLQEILLAKGKGLELVRPDPNTGKVHTLLQTEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RSL  FRLTG  KDY V+GSDSGRIVILEYNP+KN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   VVRSLMSFRLTGGSKDYAVIGSDSGRIVILEYNPAKNQLEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD+ ARLTISSPLEAHKS+T+ Y + G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAVEKQKLVYILNRDSEARLTISSPLEAHKSNTLTYHMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA++ Q+ LTFYELDLGLNHV RK+SEP++  AN L++VPG
Sbjct: 181  MFACLEIDYEEADTDPTGEAATKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QTE GDIFKVTLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF A EFGNH LY
Sbjct: 300  FFLVQTEQGDIFKVTLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVACEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR LKNLV ++ + S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRQLKNLVMVDDIPSYAPILGCQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSS+R+LR GL VSEMAVS+LPG P+AVWTVKK ++DEFDAYI+VS
Sbjct: 418  EDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIG+TVEEV+DSGFL TTP+L  S +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGDTVEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TI+K   N+ QVVIALSGGEL+YFE+D TGQL E  E+ +M  +V C+ + SVP 
Sbjct: 538  APGKKTIMKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGSVPS 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE---VQASVGGEDG 651
            G +RS FLAVG  DNT+RI+SLDP DC+   S+Q++ S  ESL  +E   V+ S   +  
Sbjct: 598  GEQRSWFLAVGLADNTVRIISLDPTDCLSPRSMQALPSAAESLCIVEMGTVETSSEDDGV 657

Query: 652  ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
                  ++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + G  A+L +S
Sbjct: 658  TITTGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIQMQGSEAVLAMS 717

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            SR WL Y ++ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +E+LG  FN+
Sbjct: 718  SRSWLSYYYQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQ 777

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK----ECFEAAGMGEN--GN 825
               PL YTP+RF +  +   ++I ETD  A T E +   KK    E  EAAG  E    N
Sbjct: 778  ITFPLEYTPKRFAIHQETGKLIISETDHNAYTEETKTVRKKQMADEMREAAGEDEQELAN 837

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
               D   N       + L ++ +  PKA +  W S IRV+DP + +T   ++L  NEA  
Sbjct: 838  EMADAFIN-------EVLPEDVFSSPKAGTGMWASQIRVMDPINGHTYSKVQLAQNEAVL 890

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            S+  V F   +   ++A G AK LQ  PK +   G+I +Y+   +   LE +H+T+++  
Sbjct: 891  SLALVRFAVDQKWYVVA-GVAKDLQINPKIS-GGGFIDVYKVDSQTHQLEHMHRTEIDDA 948

Query: 946  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQES 1005
            P ALC FQGRLLAGIG VLR+YDLGKK+LLRKCENK  PN IV+I     R+YV D+QES
Sbjct: 949  PGALCPFQGRLLAGIGKVLRIYDLGKKKLLRKCENKHIPNQIVNIQGMGQRVYVSDVQES 1008

Query: 1006 FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE 1065
             +  KY+R ENQL IFADD+ PRW+T+A  +D+DT+A  DKFGNI  +RLP  VSD+++E
Sbjct: 1009 VYCIKYKRAENQLIIFADDTHPRWITSASLLDYDTVATGDKFGNIAILRLPHSVSDDVDE 1068

Query: 1066 DPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGA 1125
            DPTG K  W++G LNGA  K E I  FH+G++V SLQKA+L+PGG ES+IY T+ G++GA
Sbjct: 1069 DPTGNKALWDRGLLNGASQKAENICTFHLGEIVMSLQKATLIPGGSESLIYATMSGTVGA 1128

Query: 1126 MLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLD 1185
            ++ F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS Y+PVK+V+DGDLCEQF +L   
Sbjct: 1129 LVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSYYYPVKNVMDGDLCEQFTSLDPA 1188

Query: 1186 LQRKIADELDRTPGEILKKLEEIRNK 1211
             Q+ IA +L RTP E+ KKLE+IR +
Sbjct: 1189 KQKSIASDLGRTPSEVAKKLEDIRTR 1214


>gi|195428692|ref|XP_002062402.1| GK16677 [Drosophila willistoni]
 gi|194158487|gb|EDW73388.1| GK16677 [Drosophila willistoni]
          Length = 1273

 Score = 1423 bits (3684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/1232 (56%), Positives = 906/1232 (73%), Gaps = 28/1232 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  AI+GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 46   MYLYNLTLQKGTGVTHAIHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG 105

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FRLTG  KDYIVVGSDSGRIVILEY P+KN  +K+HQETFGK+GCRRIVPGQY
Sbjct: 106  CIRALMSFRLTGGTKDYIVVGSDSGRIVILEYIPAKNALEKVHQETFGKTGCRRIVPGQY 165

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 166  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 225

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 226  MFACLEIDYEEADLDPSGDAAQHTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 285

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 286  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 344

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 345  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 404

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 405  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIVTSQVADLAN 462

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK V+DEFDAYI+VS
Sbjct: 463  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRVDDEFDAYIIVS 522

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 523  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 582

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VP+
Sbjct: 583  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPD 642

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV------QASVGG 648
            G +RS FL+VG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+        +VG 
Sbjct: 643  GEQRSWFLSVGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTTAVGD 702

Query: 649  ED------GADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
            ED      G  +  +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + 
Sbjct: 703  EDVPAQRSGGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQ 762

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +
Sbjct: 763  GSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILAL 822

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+LG  FN+ A PL+YTPR FV+ P    M+I ETD  A T + + A K++  E      
Sbjct: 823  EKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEM---R 879

Query: 823  NGNGNMDQMENGDDENKY--DPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
            N  G+ ++    +  N +  + L ++ +  PKA    W S IR LD     T   + L  
Sbjct: 880  NAAGDEERELAREMANAFISEALPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFNVPLTQ 939

Query: 881  NEAAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            NEA  S+  + F     G   LAVG AK LQ  P R    G I IY+      SLE LH+
Sbjct: 940  NEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNP-RISQGGCIDIYKIDPTCSSLEFLHR 998

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T++E IP ALC FQGRLLAG G +LR+YDLGKK++LRKCENK  P  IV+I     R+YV
Sbjct: 999  TEIEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYV 1058

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
             D+QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V
Sbjct: 1059 SDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSV 1118

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            +D+++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T+
Sbjct: 1119 TDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATL 1178

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ+
Sbjct: 1179 SGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQY 1238

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             ++    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1239 LSIDAVKQKSIAGDMFRTPNQICKKLEDIRTR 1270


>gi|195586770|ref|XP_002083143.1| GD13507 [Drosophila simulans]
 gi|194195152|gb|EDX08728.1| GD13507 [Drosophila simulans]
          Length = 1227

 Score = 1423 bits (3683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1230 (56%), Positives = 902/1230 (73%), Gaps = 25/1230 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R+L  FRLTG  KDYIVVGSDSGRIVILEYNPSKN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK  +DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VPE
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPE 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV----QASVGGED 650
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+      + GG D
Sbjct: 598  GEQRSWFLAVGLSDNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGGLD 657

Query: 651  GADHPA--------SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
              D PA        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + 
Sbjct: 658  D-DAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQ 716

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +
Sbjct: 717  GSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILAL 776

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+LG  FN+ A PL+YTPR FV+ P    M+I ETD  A T E+ ++A+KE         
Sbjct: 777  EKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYT-EDTKSARKEQMAEEMRSA 835

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
             G+   +      +    + L ++ +  PKA    W S IR LD     T   + L  NE
Sbjct: 836  AGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNE 895

Query: 883  AAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            A  S+  + F     G   LAVG AK LQ  P R    G I IY+      SLE +H+T+
Sbjct: 896  AIMSMAMLKFSIAADGRYYLAVGIAKDLQLNP-RISQGGCIDIYKIDPTCSSLEFMHRTE 954

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            ++ IP ALC FQGRLLAG G +LR+YD GKK++LRKCENK  P  IV+I     R+YV D
Sbjct: 955  IDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSD 1014

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V+D
Sbjct: 1015 VQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTD 1074

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            +++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T+ G
Sbjct: 1075 DVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSG 1134

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ+ +
Sbjct: 1135 TVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLS 1194

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1195 IEAAKQKSIAGDMFRTPNQICKKLEDIRTR 1224


>gi|195336406|ref|XP_002034829.1| GM14250 [Drosophila sechellia]
 gi|194127922|gb|EDW49965.1| GM14250 [Drosophila sechellia]
          Length = 1227

 Score = 1422 bits (3682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1230 (56%), Positives = 902/1230 (73%), Gaps = 25/1230 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R+L  FRLTG  KDYIVVGSDSGRIVILEYNPSKN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK  +DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VPE
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPE 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV----QASVGGED 650
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+      + GG D
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGGLD 657

Query: 651  GADHPA--------SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
              D PA        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + 
Sbjct: 658  D-DAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQ 716

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +
Sbjct: 717  GSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILAL 776

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+LG  FN+ A PL+YTPR FV+ P    M+I ETD  A T E+ ++A+KE         
Sbjct: 777  EKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYT-EDTKSARKEQMAEEMRSA 835

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
             G+   +      +    + L ++ +  PKA    W S IR LD     T   + L  NE
Sbjct: 836  AGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNE 895

Query: 883  AAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            A  S+  + F     G   LAVG AK LQ  P R    G I IY+      SLE +H+T+
Sbjct: 896  AIMSMAMLKFSIAADGRYYLAVGIAKDLQLNP-RISQGGCIDIYKIDPTCSSLEFMHRTE 954

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            ++ IP ALC FQGRLLAG G +LR+YD GKK++LRKCENK  P  IV+I     R+YV D
Sbjct: 955  IDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSD 1014

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V+D
Sbjct: 1015 VQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTD 1074

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            +++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T+ G
Sbjct: 1075 DVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSG 1134

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ+ +
Sbjct: 1135 TVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLS 1194

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1195 IEAAKQKSIAGDMFRTPNQICKKLEDIRTR 1224


>gi|195126264|ref|XP_002007593.1| GI12293 [Drosophila mojavensis]
 gi|193919202|gb|EDW18069.1| GI12293 [Drosophila mojavensis]
          Length = 1227

 Score = 1422 bits (3680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 701/1233 (56%), Positives = 904/1233 (73%), Gaps = 31/1233 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FRLTG  KDYIVVGSDSGRIVILEY PSKN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYMPSKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADLDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK ++DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VPE
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPE 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV-----QASVGGE 649
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+       + G +
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNAGAD 657

Query: 650  DGADHPA--------SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            D  D PA        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + +
Sbjct: 658  D--DVPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKM 715

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
             G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  
Sbjct: 716  QGAEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILA 775

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA--AG 819
            +E+LG  FN+ A PL++TPR FV+ P    M+I ETD  A T E + A K++  E   + 
Sbjct: 776  LEKLGAVFNQVAFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEETKNARKEQMAEEMRSA 835

Query: 820  MGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
             GE       +M N       + L ++ +  PKA    W S IR LD     T   + L 
Sbjct: 836  AGEEERELAREMANAFIN---EVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFTVPLT 892

Query: 880  DNEAAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
             NEA  S+  + F     G   LAVG AK LQ  P R    G I IY+      +LE LH
Sbjct: 893  QNEAIMSMAMLKFSVAADGRYYLAVGIAKDLQLNP-RISQGGCIDIYKIDPTCSALEFLH 951

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            +T++E IP ALC FQGRLLAG G +LR+YDLGKK++LRKCENK  P  IV+I     R+Y
Sbjct: 952  RTEIEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVY 1011

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            V D+QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  
Sbjct: 1012 VSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHS 1071

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            V+D+++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T
Sbjct: 1072 VTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYAT 1131

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            + G++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ
Sbjct: 1132 LSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQ 1191

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            + ++    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1192 YLSIDAVKQKSIAGDMFRTPNQICKKLEDIRTR 1224


>gi|24654874|ref|NP_728546.1| CG13900, isoform A [Drosophila melanogaster]
 gi|23092721|gb|AAF47416.2| CG13900, isoform A [Drosophila melanogaster]
 gi|60678131|gb|AAX33572.1| LD01809p [Drosophila melanogaster]
 gi|220950356|gb|ACL87721.1| CG13900-PA [synthetic construct]
 gi|289803030|gb|ADD20765.1| FI04459p [Drosophila melanogaster]
          Length = 1227

 Score = 1422 bits (3680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1230 (56%), Positives = 901/1230 (73%), Gaps = 25/1230 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R+L  FRLTG  KDYIVVGSDSGRIVILEYNPSKN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK  +DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VPE
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPE 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV----QASVGGED 650
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+      + GG D
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGGLD 657

Query: 651  GADHPA--------SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
              D PA        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + 
Sbjct: 658  D-DAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQ 716

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +
Sbjct: 717  GSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILAL 776

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+LG  FN+ A PL+YTPR FV+ P    M+I ETD  A T E+ ++A+KE         
Sbjct: 777  EKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYT-EDTKSARKEQMAEEMRSA 835

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
             G+   +      +    + L ++ +  PKA    W S IR LD     T   + L  NE
Sbjct: 836  AGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNE 895

Query: 883  AAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            A  S+  + F     G   LAVG AK LQ  P R    G I IY+      SLE +H+T 
Sbjct: 896  AIMSMAMLKFSIAADGRYYLAVGIAKDLQLNP-RISQGGCIDIYKIDPTCSSLEFMHRTD 954

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            ++ IP ALC FQGRLLAG G +LR+YD GKK++LRKCENK  P  IV+I     R+YV D
Sbjct: 955  IDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSD 1014

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V+D
Sbjct: 1015 VQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTD 1074

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            +++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T+ G
Sbjct: 1075 DVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSG 1134

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ+ +
Sbjct: 1135 TVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLS 1194

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1195 IEAAKQKSIAGDMFRTPNQICKKLEDIRTR 1224


>gi|391341059|ref|XP_003744849.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Metaseiulus
            occidentalis]
          Length = 1223

 Score = 1420 bits (3677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1231 (56%), Positives = 909/1231 (73%), Gaps = 31/1231 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ  T I A+ +GNFSG K  EI VA+GK+LE+L+P+ N+G++ T+ +T++FG
Sbjct: 1    MHLYNLTLQHATAITASCHGNFSGHKQQEIAVAKGKILEILKPDSNTGKVHTVYATDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDY++VGSDSGRI ILE+NP+KNV +KIH ETFGKSGCRRIVPGQY
Sbjct: 61   VIRSLMSFRLTGGSKDYLIVGSDSGRICILEFNPAKNVLEKIHMETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMIGA EKQKLVY+LNRD+ ARLTISSPLEAHKS+T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMIGAVEKQKLVYILNRDSNARLTISSPLEAHKSNTLVYHMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA IELDY EAD D TG+AA +AQ++LTFYELDLGLNHV RK+SEP++  +N L+ VPG
Sbjct: 181  VFACIELDYEEADNDHTGEAAKKAQQSLTFYELDLGLNHVVRKYSEPLEEPSNFLIAVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVLVC+ENF+ YKN G   D+R  IPRR    D P +RG+L V +  H+ K++F
Sbjct: 241  GVDGPSGVLVCSENFITYKNLGDQADIRCPIPRRRNDLDDP-DRGMLFVCSTQHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D++ V+E+K+KYFD++PV  +M VLKSG+LF ASEFGNH+LY
Sbjct: 300  FFLAQTEQGDIFKITLEFDDDAVTEIKLKYFDSLPVAQTMHVLKSGFLFVASEFGNHSLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G + D E   S++   EEG    FF PR LKNLV +++++SL PIM  R+A+L  
Sbjct: 360  QIAHLGDNTD-EPEFSSIFPLEEG-DTFFFLPRELKNLVLVDEMDSLSPIMTARVADLTN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS++R+LR GL VSEMAVS+LPG PSAVWTVKK  +DE+DAYIVVS
Sbjct: 418  EDTPQLYAACGRGPRSTMRVLRHGLEVSEMAVSELPGNPSAVWTVKKRADDEYDAYIVVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+LA   IG D+L+Q++P GIRHIR D R+NEWR
Sbjct: 478  FINATLVLSIGETVEEVTDSGFLGTTPTLACHQIGHDALVQIYPEGIRHIRADRRVNEWR 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            T GK+ IVK   N+ QVVIAL+GGELIYFE+D +GQL E  E+ EM+ DV C+ + SVP 
Sbjct: 538  TSGKKLIVKCAVNQRQVVIALTGGELIYFEMDSSGQLNEYAERKEMNSDVLCMALGSVPA 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVS-SPPESLLFLEVQASV------- 646
            G +R++FLAVGS D T+ ++SLDP  C+ ILSVQ ++ S PESL  +E++A         
Sbjct: 598  GEQRTKFLAVGSSDGTVHVISLDPKSCLSILSVQGMTESNPESLAIVELKACFLPSISVD 657

Query: 647  --GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
              G E+G+   A L+LN GLQNG+L R V+D VTG +SD+R+RFLG R  KLF + + G 
Sbjct: 658  MSGHEEGSGSSA-LYLNIGLQNGILKRMVLDAVTGDMSDTRTRFLGSRSVKLFKIKMQGT 716

Query: 705  AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
             A+L +SSR WL Y+ + RF LTPLSY++LEYA+ F S+QC EG+V++AGN LR+  +E+
Sbjct: 717  DAVLAMSSRCWLSYLFQNRFHLTPLSYDSLEYASGFCSEQCPEGIVAIAGNTLRILALEK 776

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK----ECFEAAGM 820
            LG  FN+ + PL +TPR FV+  K + +++IETD  A T   +E  K+    E  EAAG 
Sbjct: 777  LGAVFNQLSAPLSFTPRSFVIDKKSQKLIVIETDHNAYTDSVKEKRKQHVAEEMIEAAGE 836

Query: 821  GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
             E      +           + L + Q+G P+A    W S IR+L+P   +T   ++L+ 
Sbjct: 837  AEQ-----EMAAELAAAFLSEDLPESQFGAPRAGKKHWASVIRILNPSDLSTVYKIQLEQ 891

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S+  VNF DK    +L VG +K LQ  P R     +I+ YR V++   LEL+H T
Sbjct: 892  NEAAVSVALVNF-DKSTDPILLVGISKDLQLSP-RECRNSFINAYRVVKDCTELELVHTT 949

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
             ++ +P A+C F  R+L G+G  LR+YD GKK++LRKCENK  PN IV+IN   +RI VG
Sbjct: 950  VMDDVPQAMCNFGNRVLIGVGRCLRIYDFGKKKMLRKCENKHIPNLIVTINAVGNRIVVG 1009

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+QESF F +YR  ENQL IFADD  PRW TAA  +D+ T+ G DKFGN+Y +RLP + S
Sbjct: 1010 DVQESFFFIRYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGNVYILRLPGNTS 1069

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            D+++EDPTG +  W++G L GA  K E +   HVG+++ SLQK +L+PGG E+++Y T+ 
Sbjct: 1070 DDVDEDPTGVRSLWDRGWLGGAGQKAEVLSMTHVGELIVSLQKTALIPGGPEAIVYTTIA 1129

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G +GA++ FSS+DD +FF HLEM+MR EHPP+CGRDH+++RS YFPVK VIDGDLCEQ+ 
Sbjct: 1130 GGVGALIPFSSKDDHEFFQHLEMYMRTEHPPICGRDHLSFRSYYFPVKAVIDGDLCEQYN 1189

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +L  + Q++IADEL+R P E+ KKLE+IR K
Sbjct: 1190 SLDANKQKQIADELERLPHEVAKKLEDIRTK 1220


>gi|60677959|gb|AAX33486.1| RE01065p [Drosophila melanogaster]
          Length = 1227

 Score = 1420 bits (3675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1230 (56%), Positives = 900/1230 (73%), Gaps = 25/1230 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R+L  FRLTG  KDYIVVGSDSGRIVILEYNPSKN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            + A +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MLACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK  +DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VPE
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPE 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV----QASVGGED 650
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+      + GG D
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGGLD 657

Query: 651  GADHPA--------SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
              D PA        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + 
Sbjct: 658  D-DAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQ 716

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +
Sbjct: 717  GSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILAL 776

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+LG  FN+ A PL+YTPR FV+ P    M+I ETD  A T E+ ++A+KE         
Sbjct: 777  EKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYT-EDTKSARKEQMAEEMRSA 835

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
             G+   +      +    + L ++ +  PKA    W S IR LD     T   + L  NE
Sbjct: 836  AGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNE 895

Query: 883  AAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            A  S+  + F     G   LAVG AK LQ  P R    G I IY+      SLE +H+T 
Sbjct: 896  AIMSMAMLKFSIAADGRYYLAVGIAKDLQLNP-RISQGGCIDIYKIDPTCSSLEFMHRTD 954

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            ++ IP ALC FQGRLLAG G +LR+YD GKK++LRKCENK  P  IV+I     R+YV D
Sbjct: 955  IDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSD 1014

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V+D
Sbjct: 1015 VQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTD 1074

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            +++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T+ G
Sbjct: 1075 DVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSG 1134

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ+ +
Sbjct: 1135 TVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLS 1194

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1195 IEAAKQKSIAGDMFRTPNQICKKLEDIRTR 1224


>gi|391341057|ref|XP_003744848.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Metaseiulus
            occidentalis]
          Length = 1211

 Score = 1419 bits (3674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 695/1222 (56%), Positives = 907/1222 (74%), Gaps = 25/1222 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ  T I A+ +GNFSG K  EI VA+GK+LE+L+P+ N+G++ T+ +T++FG
Sbjct: 1    MHLYNLTLQHATAITASCHGNFSGHKQQEIAVAKGKILEILKPDSNTGKVHTVYATDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDY++VGSDSGRI ILE+NP+KNV +KIH ETFGKSGCRRIVPGQY
Sbjct: 61   VIRSLMSFRLTGGSKDYLIVGSDSGRICILEFNPAKNVLEKIHMETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMIGA EKQKLVY+LNRD+ ARLTISSPLEAHKS+T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMIGAVEKQKLVYILNRDSNARLTISSPLEAHKSNTLVYHMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA IELDY EAD D TG+AA +AQ++LTFYELDLGLNHV RK+SEP++  +N L+ VPG
Sbjct: 181  VFACIELDYEEADNDHTGEAAKKAQQSLTFYELDLGLNHVVRKYSEPLEEPSNFLIAVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVLVC+ENF+ YKN G   D+R  IPRR    D P +RG+L V +  H+ K++F
Sbjct: 241  GVDGPSGVLVCSENFITYKNLGDQADIRCPIPRRRNDLDDP-DRGMLFVCSTQHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D++ V+E+K+KYFD++PV  +M VLKSG+LF ASEFGNH+LY
Sbjct: 300  FFLAQTEQGDIFKITLEFDDDAVTEIKLKYFDSLPVAQTMHVLKSGFLFVASEFGNHSLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G + D E   S++   EEG    FF PR LKNLV +++++SL PIM  R+A+L  
Sbjct: 360  QIAHLGDNTD-EPEFSSIFPLEEG-DTFFFLPRELKNLVLVDEMDSLSPIMTARVADLTN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS++R+LR GL VSEMAVS+LPG PSAVWTVKK  +DE+DAYIVVS
Sbjct: 418  EDTPQLYAACGRGPRSTMRVLRHGLEVSEMAVSELPGNPSAVWTVKKRADDEYDAYIVVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+LA   IG D+L+Q++P GIRHIR D R+NEWR
Sbjct: 478  FINATLVLSIGETVEEVTDSGFLGTTPTLACHQIGHDALVQIYPEGIRHIRADRRVNEWR 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            T GK+ IVK   N+ QVVIAL+GGELIYFE+D +GQL E  E+ EM+ DV C+ + SVP 
Sbjct: 538  TSGKKLIVKCAVNQRQVVIALTGGELIYFEMDSSGQLNEYAERKEMNSDVLCMALGSVPA 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVS-SPPESLLFLEVQASVGGEDGAD 653
            G +R++FLAVGS D T+ ++SLDP  C+ ILSVQ ++ S PESL  +++    G E+G+ 
Sbjct: 598  GEQRTKFLAVGSSDGTVHVISLDPKSCLSILSVQGMTESNPESLAIVDMS---GHEEGSG 654

Query: 654  HPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
              A L+LN GLQNG+L R V+D VTG +SD+R+RFLG R  KLF + + G  A+L +SSR
Sbjct: 655  SSA-LYLNIGLQNGILKRMVLDAVTGDMSDTRTRFLGSRSVKLFKIKMQGTDAVLAMSSR 713

Query: 714  PWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETA 773
             WL Y+ + RF LTPLSY++LEYA+ F S+QC EG+V++AGN LR+  +E+LG  FN+ +
Sbjct: 714  CWLSYLFQNRFHLTPLSYDSLEYASGFCSEQCPEGIVAIAGNTLRILALEKLGAVFNQLS 773

Query: 774  LPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK----ECFEAAGMGENGNGNMD 829
             PL +TPR FV+  K + +++IETD  A T   +E  K+    E  EAAG  E      +
Sbjct: 774  APLSFTPRSFVIDKKSQKLIVIETDHNAYTDSVKEKRKQHVAEEMIEAAGEAEQ-----E 828

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
                       + L + Q+G P+A    W S IR+L+P   +T   ++L+ NEAA S+  
Sbjct: 829  MAAELAAAFLSEDLPESQFGAPRAGKKHWASVIRILNPSDLSTVYKIQLEQNEAAVSVAL 888

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLAL 949
            VNF DK    +L VG +K LQ  P R     +I+ YR V++   LEL+H T ++ +P A+
Sbjct: 889  VNF-DKSTDPILLVGISKDLQLSP-RECRNSFINAYRVVKDCTELELVHTTVMDDVPQAM 946

Query: 950  CQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFC 1009
            C F  R+L G+G  LR+YD GKK++LRKCENK  PN IV+IN   +RI VGD+QESF F 
Sbjct: 947  CNFGNRVLIGVGRCLRIYDFGKKKMLRKCENKHIPNLIVTINAVGNRIVVGDVQESFFFI 1006

Query: 1010 KYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTG 1069
            +YR  ENQL IFADD  PRW TAA  +D+ T+ G DKFGN+Y +RLP + SD+++EDPTG
Sbjct: 1007 RYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGNVYILRLPGNTSDDVDEDPTG 1066

Query: 1070 GKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAF 1129
             +  W++G L GA  K E +   HVG+++ SLQK +L+PGG E+++Y T+ G +GA++ F
Sbjct: 1067 VRSLWDRGWLGGAGQKAEVLSMTHVGELIVSLQKTALIPGGPEAIVYTTIAGGVGALIPF 1126

Query: 1130 SSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRK 1189
            SS+DD +FF HLEM+MR EHPP+CGRDH+++RS YFPVK VIDGDLCEQ+ +L  + Q++
Sbjct: 1127 SSKDDHEFFQHLEMYMRTEHPPICGRDHLSFRSYYFPVKAVIDGDLCEQYNSLDANKQKQ 1186

Query: 1190 IADELDRTPGEILKKLEEIRNK 1211
            IADEL+R P E+ KKLE+IR K
Sbjct: 1187 IADELERLPHEVAKKLEDIRTK 1208


>gi|194749950|ref|XP_001957397.1| GF24063 [Drosophila ananassae]
 gi|190624679|gb|EDV40203.1| GF24063 [Drosophila ananassae]
          Length = 1228

 Score = 1419 bits (3674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/1233 (56%), Positives = 905/1233 (73%), Gaps = 30/1233 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLMSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FRLTG  KDYIVVGSDSGRIVILEY PSKN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYIPSKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADLDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK  +DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VPE
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPE 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV-----QASVGGE 649
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+       S GG 
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTSAGGV 657

Query: 650  DGADHPA--------SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            +  D PA        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + +
Sbjct: 658  N-EDAPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKM 716

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
             G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  
Sbjct: 717  QGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILA 776

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            +E+LG  FN+ A PL+YTPR FV+ P    M+I ETD  A T + + A K++  E     
Sbjct: 777  LEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKNARKEQMAEEM--- 833

Query: 822  ENGNGNMDQMENGDDENKY--DPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
             +  G+ ++    +  N +  + L ++ +  PKA    W S IR LD     T   + L 
Sbjct: 834  RSAAGDEERELAREMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFNVPLT 893

Query: 880  DNEAAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
             NEA  S+  + F     G   LAVG AK LQ  P R    G I IY+      SLE +H
Sbjct: 894  QNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNP-RISQGGCIDIYKIDPTCSSLEFMH 952

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            +T+++ IP ALC FQGRLLAG G +LR+YDLGKK++LRKCENK  P  IV+I     R+Y
Sbjct: 953  RTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVY 1012

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            V D+QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  
Sbjct: 1013 VSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHS 1072

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            V+D+++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T
Sbjct: 1073 VTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYAT 1132

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            + G++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ
Sbjct: 1133 LSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQ 1192

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            + ++    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1193 YLSIDASKQKSIAGDMFRTPNQICKKLEDIRTR 1225


>gi|195490209|ref|XP_002093045.1| GE20993 [Drosophila yakuba]
 gi|194179146|gb|EDW92757.1| GE20993 [Drosophila yakuba]
          Length = 1227

 Score = 1419 bits (3672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 696/1229 (56%), Positives = 900/1229 (73%), Gaps = 23/1229 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FRLTG  KDYIVVGSDSGRIVILEYN +KN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYNAAKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK  +DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VPE
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPE 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGA-- 652
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+  +     GA  
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGALD 657

Query: 653  -DHPA--------SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG 703
             D PA        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + G
Sbjct: 658  DDAPAPRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQG 717

Query: 704  RAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIE 763
              A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +E
Sbjct: 718  AEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALE 777

Query: 764  RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGEN 823
            +LG  FN+ A PL+YTPR FV+ P    M+I ETD  A T E+ ++A+KE          
Sbjct: 778  KLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYT-EDTKSARKEQMAEEMRSAA 836

Query: 824  GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEA 883
            G+   +      +    + L ++ +  PKA    W S IR LD     T   + L  NEA
Sbjct: 837  GDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEA 896

Query: 884  AFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
              S+  + F     G   LAVG AK LQ  P R    G I IY+      SLE +H+T++
Sbjct: 897  IMSMAMLKFSIAADGRYYLAVGIAKDLQLNP-RISQGGCIDIYKIDPTCSSLEFMHRTEI 955

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDI 1002
            + IP ALC FQGRLLAG G +LR+YD GKK++LRKCENK  P  IV+I     R+YV D+
Sbjct: 956  DEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDV 1015

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
            QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V+D+
Sbjct: 1016 QESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDD 1075

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGS 1122
            ++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T+ G+
Sbjct: 1076 VDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSGT 1135

Query: 1123 LGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL 1182
            +GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ+ ++
Sbjct: 1136 VGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSI 1195

Query: 1183 SLDLQRKIADELDRTPGEILKKLEEIRNK 1211
                Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1196 EAAKQKSIAGDMFRTPNQICKKLEDIRTR 1224


>gi|198420618|ref|XP_002125906.1| PREDICTED: similar to Splicing factor 3B subunit 3
            (Spliceosome-associated protein 130) (SAP 130)
            (Pre-mRNA-splicing factor SF3b 130 kDa subunit) (SF3b130)
            (STAF130) [Ciona intestinalis]
          Length = 1216

 Score = 1419 bits (3672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 695/1227 (56%), Positives = 907/1227 (73%), Gaps = 30/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY LTLQ+ T II A++GNFSGTK  EI V+RGK+LELL+P+ N+G++ TL++ E+FG
Sbjct: 1    MFLYGLTLQRATTIIHAVHGNFSGTKQQEIAVSRGKLLELLKPDPNTGKVHTLITVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDY+V GSDSGRI ILEY P+KN F+KIH ETFGKSGCRRIVPGQY
Sbjct: 61   EIRSLMSFRLTGGNKDYVVCGSDSGRISILEYIPNKNKFEKIHLETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD+ ARLTISSPLEAHK++T VY + GID GF+NP
Sbjct: 121  LAIDPKGRAVMIGALEKQKLVYILNRDSQARLTISSPLEAHKANTFVYHMVGIDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +ELDY EAD D TG+A    Q+ LTFYELDLGLNHV RK+SEP++  AN L++VPG
Sbjct: 181  MFACLELDYEEADTDPTGEAVQNTQQTLTFYELDLGLNHVVRKYSEPLEERANHLISVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGP GVLVCAEN++ YKN G  PD+R  IPRR    D P ERG+++V +ATH+ K++F
Sbjct: 241  GNDGPGGVLVCAENYITYKNFGDQPDIRTPIPRRRNDLDDP-ERGMIVVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QTE GDIFKVTLE D + V+E+++KYFDT+PV+ +MCVL++G+LF A+E GNH LY
Sbjct: 300  FFLIQTEQGDIFKVTLETDEDMVTEIRLKYFDTVPVSMAMCVLRTGFLFVAAEMGNHCLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    F+ PR L+NLV +++++SL PIM   I++L  
Sbjct: 360  QIAHLGDDDD-ETEFSSAMPLEEG-DTFFYAPRALRNLVLVDELDSLSPIMTCLISDLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTVK    +EFD+YI+VS
Sbjct: 418  EDTPQLYVTCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKIKEEEEFDSYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+G+++L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGENALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TI++   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EM+ +V C+D++ VP 
Sbjct: 538  TPGKKTILRCAVNQRQVVIALTGGELVYFEMDQSGQLNEYTERKEMNSEVVCMDLSKVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGED--GA 652
              +R+RFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PES+  +E+    GGED  GA
Sbjct: 598  TEQRTRFLAVGLADNTVRIISLDPTDCLQPLSMQALPATPESVCIIEIG---GGEDETGA 654

Query: 653  DHPAS-LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
               +  L LN GLQNGVL RT +D VTG LSD+R+R+LG R  KLF V+  G  A+L +S
Sbjct: 655  QKASGGLVLNIGLQNGVLLRTTLDNVTGDLSDTRTRYLGTRAVKLFRVLTQGSDAVLAMS 714

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            SR WL Y H+ RF LTPLSYE+LE+A+ F+S+QC EG+V+++ N LR+  +E+LG  FN+
Sbjct: 715  SRTWLSYQHQNRFHLTPLSYESLEFASGFASEQCPEGIVAISANTLRILALEKLGTVFNQ 774

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK----ECFEAAGMGENGNGN 827
             +  L+YTPRRF +      ++I+ETD  A T E +E  K+    E  EAAG        
Sbjct: 775  ASTGLQYTPRRFAIHYDSGNVIILETDHNAYTEETKENRKQQMAEEMIEAAGE------- 827

Query: 828  MDQMENGDDENK---YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
             D+ E   +       + L ++++G  KA    W S IR++ PRS  T   + L+ NEAA
Sbjct: 828  -DERELAAEMTAAFLRESLPEDKFGASKAGPGMWSSQIRLMHPRSGETIQKICLEQNEAA 886

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             SI    F +    T + VG A  L   P++    G IH Y+  EEG  LEL+HKT V+ 
Sbjct: 887  LSIAICKFPNNSDDTFVLVGVACELLINPRQARGGGEIHTYKINEEGNKLELVHKTVVDE 946

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P A+C +QGR+L G+G +LR+YDLGKK+LLRKCENK  PN I SI     RI V D+QE
Sbjct: 947  VPSAICPYQGRVLIGVGKLLRIYDLGKKKLLRKCENKHIPNYIASIQAVGHRIIVCDVQE 1006

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S H+ +YRR ENQL +FADD+ PRW+T+A  +D++T+A +DKFGNI  +RLP DV+D+++
Sbjct: 1007 SVHWVRYRRHENQLVVFADDTYPRWVTSATVLDWNTVAVSDKFGNISVLRLPSDVNDDVQ 1066

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            +DP+G K  W +G LNGA  K E +  +HVG+ V SLQK +L+PGG ES++Y T+ GS+G
Sbjct: 1067 DDPSGTKALWTRGILNGAMQKCEVLCMYHVGETVLSLQKTTLIPGGSESLVYTTLSGSIG 1126

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+S +D DFF HLEMHMR E PPL GRDH+AYRS YFPVK+VIDGDLCE F ++  
Sbjct: 1127 MLVPFTSHEDHDFFQHLEMHMRNECPPLLGRDHLAYRSYYFPVKNVIDGDLCELFNSMEA 1186

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
              Q+ +A+ELDR P E+ KKLE+IR +
Sbjct: 1187 SKQKSVAEELDRVPSEVSKKLEDIRTR 1213


>gi|307205956|gb|EFN84082.1| Splicing factor 3B subunit 3 [Harpegnathos saltator]
          Length = 1217

 Score = 1418 bits (3671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/1219 (55%), Positives = 907/1219 (74%), Gaps = 13/1219 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TGI  A++GNFSG+K  EI+V+RGK LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RSL  FRLTG  KDYIVVGSDSGRIVILEY P+KN+F+K+HQETFGKSGCRRIVPGQY
Sbjct: 61   IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNIFEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD  ARLTISSPLEAHKS+T+VY   G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG AA + Q+ LT YELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D++ V+E+K+KYFDT+PV ASMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDDDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV +++++SL PIM  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK+ V++E+DAYI+VS
Sbjct: 418  EDTPQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TIVK   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ +M  +V C+ + +V  
Sbjct: 538  APGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAV 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE--VQASVGGEDGA 652
            G +RS FLAVG  DNT+RI+SLDP DC+   S+Q++ +  ESL  +E  V+ +   ED A
Sbjct: 598  GEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGVKDADNSEDSA 657

Query: 653  DHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSS 712
               +SL+LN GLQNGVL RTV+D ++G L+D+R+R+LG RP KLF + + G  A+L +SS
Sbjct: 658  PQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSS 717

Query: 713  RPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNET 772
            R WL Y ++ RF LTPLSYE+LE+A+ FSS+QC EG+V+++ N LR+  +E+LG  FN+ 
Sbjct: 718  RSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQV 777

Query: 773  ALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQME 832
            + PL YTPR+F +      +V+IET+  A T E ++  + +  E        +      E
Sbjct: 778  SFPLEYTPRKFAIHADSAHLVVIETEHNAYTDETKQQRRLQMAEEMQEAAGADEAAVARE 837

Query: 833  NGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
              +     +P ++  +G P+A    W S +R++ P +  T  +   + N AA  +C V F
Sbjct: 838  LAEAFLSEEP-NEAVFGAPRAGPGLWASSLRIMAPTTGQTFEVHRFEQNLAALCLCLVKF 896

Query: 893  HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF 952
             ++     L VG AK  Q  P R    G+++ Y+   E  +LELLHK+ ++ +PLA+C +
Sbjct: 897  ANQGDQLFLIVGVAKDFQLNP-RVSNGGFLYTYKVNSECTNLELLHKSPLDEVPLAICPY 955

Query: 953  QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            QGR+L G+G +LRLYD+GKK+LLRKCENK  PN +VSIN    RIYV D+QES +  +Y+
Sbjct: 956  QGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYK 1015

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
            R ENQL +FADD+ PRW+T    +D+DT+A ADKFGNI  +RL   ++D+++EDPTG K 
Sbjct: 1016 RQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDVDEDPTGNKA 1075

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSR 1132
             W++G LNGA  K + +  FHVG+ V SLQKA+L+PGG ES++Y T+ G++G ++ F+S 
Sbjct: 1076 LWDRGLLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSH 1135

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIAD 1192
            +D DFF HLEMHMR EHPPLCGRDH+++RS Y+PVK+VIDGDLCEQF ++    Q+ I+ 
Sbjct: 1136 EDHDFFQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPAKQKSISG 1195

Query: 1193 ELDRTPGEILKKLEEIRNK 1211
            +L+RTP E+ KKLE+IR +
Sbjct: 1196 DLERTPSEVSKKLEDIRTR 1214


>gi|195012560|ref|XP_001983703.1| GH16029 [Drosophila grimshawi]
 gi|193897185|gb|EDV96051.1| GH16029 [Drosophila grimshawi]
          Length = 1228

 Score = 1417 bits (3669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1230 (56%), Positives = 900/1230 (73%), Gaps = 24/1230 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FRLTG  KDYIV+GSDSGRIVILEY PSKN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CIRALMAFRLTGGTKDYIVIGSDSGRIVILEYIPSKNSLEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADLDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK ++DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VPE
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPE 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV--QASVGGEDGA 652
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+    S     GA
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNASGA 657

Query: 653  DH--PA--------SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
            D   PA        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + 
Sbjct: 658  DEDVPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQ 717

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +
Sbjct: 718  GSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILAL 777

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+LG  FN+ A PL++TPR FV+ P    M+I ETD  A T EE +  +KE         
Sbjct: 778  EKLGAVFNQVAFPLQFTPRAFVIHPDTGRMLIAETDHNAYT-EETKNERKEQMAEEMRSA 836

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
             G+   D      +    + L ++ +  PKA    W S IR LD     T   + L  NE
Sbjct: 837  AGDEERDLAREMANAFINEVLPEDMFSAPKAGLGLWASQIRCLDAMHGQTMFSVPLAQNE 896

Query: 883  AAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            A  ++  + F     G   LAVG AK LQ  P R    G I +Y+      +LE LH+T+
Sbjct: 897  AIMAMAMLKFSIAADGRYYLAVGIAKDLQLNP-RISQGGCIDVYKIDPTCSALEFLHRTE 955

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            +E IP ALC FQGRLLAG G +LR+YDLGKK++LRKCENK  P  IV+I     R+YV D
Sbjct: 956  IEEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSD 1015

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V+D
Sbjct: 1016 VQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTD 1075

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            +++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T+ G
Sbjct: 1076 DVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYSTLSG 1135

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ+ +
Sbjct: 1136 TVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLS 1195

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1196 VDASKQKSIAGDMFRTPNQICKKLEDIRTR 1225


>gi|229577321|ref|NP_001153352.1| splicing factor 3b, subunit 3 [Nasonia vitripennis]
          Length = 1216

 Score = 1417 bits (3667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/1222 (56%), Positives = 910/1222 (74%), Gaps = 20/1222 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TGI  A++GNFSGTK  EI+V+RGK LELLRP+ N+G++ T+++ E+FG
Sbjct: 1    MYLYNLTLQRATGITHAVHGNFSGTKMQEILVSRGKSLELLRPDPNTGKVHTMLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY P+KNVF+K+HQETFGKSGCRRIVPGQY
Sbjct: 61   IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYVPAKNVFEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD  ARLTISSPLEAHKS+T+VY + G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA + Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADTDPTGEAAIKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDT+PV  SMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPVANSMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV +++++SL PIM  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK+ +++EFDAYI+VS
Sbjct: 418  EDTPQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TI+K   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ +M  +V C+ + +V  
Sbjct: 538  APGKKTIIKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAA 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQ-ASVGGEDGAD 653
            G +RS FLAVG  DNT+RI+SLDP DC+   S+Q++ +  ESL  +E+       ED   
Sbjct: 598  GEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGIKDDTSEDSNQ 657

Query: 654  HPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
              ++L LN GLQNGVL RTV+D ++G LSD+R+R+LG RP KLF + + G  A+L +SSR
Sbjct: 658  MQSTLHLNIGLQNGVLLRTVLDPISGDLSDTRTRYLGSRPVKLFRIRMQGNQAVLAMSSR 717

Query: 714  PWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETA 773
             WL Y ++ RF LTPLSYE+LE+A+ FSS+QC EG+V+++ N LR+  +E+LG  FN+ +
Sbjct: 718  SWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVS 777

Query: 774  LPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAK----KECFEAAGMGENGNGNMD 829
             P  YTPR+FV+  +   +++IET+  A T E ++  +    +E  EAAG  E       
Sbjct: 778  FPFEYTPRKFVIHNESAHVLLIETEHNAYTEETKQQRRLQMAEEMQEAAGSDEAAVAR-- 835

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
              E  +     +P +++ +G P+A    W S IRV+ P +  T  +  L+ N AA  +  
Sbjct: 836  --ELAEAFLSEEP-NEQVFGAPRAGPGLWASLIRVMAPTTGTTFQVHRLEQNLAALCLAL 892

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLAL 949
            V F ++     L VG AK  Q  P R    G+++ Y+   +  S+EL+H+T ++ IPLA+
Sbjct: 893  VKFANQGDQQFLIVGVAKEYQLNP-RISNGGFLYTYKVSSDCTSIELMHRTTLDEIPLAI 951

Query: 950  CQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFC 1009
            C +QGR+L G+G +LRLYD+GKK+LLRKCENK  PN ++ IN    RIYV D+QES +  
Sbjct: 952  CPYQGRVLVGVGKMLRLYDMGKKKLLRKCENKHIPNAVICINAIGQRIYVSDVQESVYAV 1011

Query: 1010 KYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTG 1069
            +Y+R ENQL +FADD+ PRW+T    +D+DT+A ADKFGNI  +RL   ++D+++EDPTG
Sbjct: 1012 RYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASSINDDVDEDPTG 1071

Query: 1070 GKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAF 1129
             K  W++G LNGA  K + +  FHVG+ V SLQKA+L+PGG ES++Y T+ G++G ++ F
Sbjct: 1072 NKALWDRGLLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPF 1131

Query: 1130 SSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRK 1189
            +S +D DFF HLEMHMR EHPPLCGRDH+++RS Y+PVK+VIDGDLCEQF ++    Q+ 
Sbjct: 1132 TSHEDHDFFQHLEMHMRAEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPGKQKS 1191

Query: 1190 IADELDRTPGEILKKLEEIRNK 1211
            I+ +L+RTP E+ KKLE+IR +
Sbjct: 1192 ISGDLERTPSEVSKKLEDIRTR 1213


>gi|194864680|ref|XP_001971056.1| GG14635 [Drosophila erecta]
 gi|190652839|gb|EDV50082.1| GG14635 [Drosophila erecta]
          Length = 1227

 Score = 1416 bits (3666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 695/1229 (56%), Positives = 900/1229 (73%), Gaps = 23/1229 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FRLTG  KDYIVVGSDSGRIVILEYN SKN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYNASKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK  +DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D +G+L E  E+ EM  ++ C+ + +VP+
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPSGELNEYTERSEMPAEIMCMALGTVPD 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGA-- 652
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+  +     GA  
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGALD 657

Query: 653  -DHPA--------SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG 703
             D PA        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + G
Sbjct: 658  DDAPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQG 717

Query: 704  RAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIE 763
              A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +E
Sbjct: 718  AEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALE 777

Query: 764  RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGEN 823
            +LG  FN+ A PL+YTPR FV+ P    M+I ETD  A T E+ ++A+KE          
Sbjct: 778  KLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYT-EDTKSARKEQMAEEMRSAA 836

Query: 824  GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEA 883
            G+   +      +    + L ++ +  PKA    W S IR LD     T   + L  NEA
Sbjct: 837  GDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFNVPLTQNEA 896

Query: 884  AFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
              S+  + F     G   LAVG AK LQ  P R    G I IY+      SLE +H+T++
Sbjct: 897  IMSMAMLKFSIAADGRYYLAVGIAKDLQLNP-RISQGGCIDIYKIDPTCSSLEFMHRTEI 955

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDI 1002
            + IP ALC FQGRLLAG G +LR+YD GKK++LRKCENK  P  IV+I     R+YV D+
Sbjct: 956  DEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDV 1015

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
            QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V+D+
Sbjct: 1016 QESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDD 1075

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGS 1122
            ++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T+ G+
Sbjct: 1076 VDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSGT 1135

Query: 1123 LGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL 1182
            +GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ+ ++
Sbjct: 1136 VGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSI 1195

Query: 1183 SLDLQRKIADELDRTPGEILKKLEEIRNK 1211
                Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1196 EAAKQKSIAGDMFRTPNQICKKLEDIRTR 1224


>gi|195376606|ref|XP_002047087.1| GJ13230 [Drosophila virilis]
 gi|194154245|gb|EDW69429.1| GJ13230 [Drosophila virilis]
          Length = 1229

 Score = 1416 bits (3665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 695/1233 (56%), Positives = 904/1233 (73%), Gaps = 29/1233 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FRLTG  KDYIVVGSDSGRIVILEY PSKN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYIPSKNSLEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADLDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK ++DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VPE
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPE 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV-----QASVGGE 649
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+       + GG 
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNAGGA 657

Query: 650  D--------GADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            D        G  +  +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + +
Sbjct: 658  DDDVPAQRSGGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKM 717

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
             G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  
Sbjct: 718  QGAEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILA 777

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            +E+LG  FN+ A PL++TPR FV+ P    M+I ETD  A T + +   K++  E     
Sbjct: 778  LEKLGAVFNQVAFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEDTKNTRKEQMAEEM--- 834

Query: 822  ENGNGNMDQMENGDDENKY--DPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
             +  G+ ++    +  N +  + L ++ +  PKA    W S IR LD     T   + L 
Sbjct: 835  RSAAGDEERELAREMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFSVPLT 894

Query: 880  DNEAAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
             NEA  S+  + F     G   LAVG AK LQ  P R    G I IY+      +LE LH
Sbjct: 895  QNEAIMSMTLLKFSVAADGRYYLAVGIAKDLQLNP-RISQGGCIDIYKIDPTCSALEFLH 953

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            +T+++ IP ALC FQGRLLAG G +LR+YDLGKK++LRKCENK  P  IV+I     R+Y
Sbjct: 954  RTEIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVY 1013

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            V D+QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  
Sbjct: 1014 VSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHS 1073

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            V+D+++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T
Sbjct: 1074 VTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYAT 1133

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            + G++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ
Sbjct: 1134 LSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQ 1193

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            + ++    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1194 YLSIDAVKQKSIAGDMFRTPNQICKKLEDIRTR 1226


>gi|125977518|ref|XP_001352792.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
 gi|54641542|gb|EAL30292.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
          Length = 1228

 Score = 1413 bits (3658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1230 (56%), Positives = 900/1230 (73%), Gaps = 24/1230 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  EI+++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEILLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FRLTG  KDYIVVGSDSGRIVILEY P+KN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYMPAKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY E+D D TG AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEESDLDPTGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P  ++MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPASAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRTLKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK  +DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VP+
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPD 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV-----QASVGGE 649
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+       S G  
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTSAGAL 657

Query: 650  DGADHP-------ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
            D    P        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + 
Sbjct: 658  DDDAPPQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQ 717

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +
Sbjct: 718  GAEAVLAMSSRSWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILAL 777

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+LG  FN+ A PL++TPR FV+ P    M+I ETD  A T E+ ++A+KE         
Sbjct: 778  EKLGAVFNQVAFPLQFTPRTFVIHPDTGRMLIAETDHNAYT-EDTKSARKEQMAEEMRSA 836

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
             G+   +      +    + L ++ +  PKA    W S IR LD     T   + L  NE
Sbjct: 837  AGDEERELAREMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFSVSLTQNE 896

Query: 883  AAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            A  S+  V F     G   LAVG A+ LQ  P R    G + IY+      SLE +H+T+
Sbjct: 897  AIMSMAMVKFSVAADGRYYLAVGIARDLQLNP-RISQGGCLDIYKIDPTCSSLEFMHRTE 955

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            ++ IP ALC FQGRLLAG G +LR+YDLGKK++LRKCENK  P  IV+I     R+YV D
Sbjct: 956  IDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSD 1015

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V+D
Sbjct: 1016 VQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTD 1075

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            +++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T+ G
Sbjct: 1076 DVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYSTLNG 1135

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ+ +
Sbjct: 1136 TVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLS 1195

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1196 IEAAKQKSIAGDMFRTPNQICKKLEDIRTR 1225


>gi|170041368|ref|XP_001848437.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
 gi|167864946|gb|EDS28329.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
          Length = 1215

 Score = 1413 bits (3657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1224 (56%), Positives = 899/1224 (73%), Gaps = 25/1224 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+  LQ+ TGI  A++G F+GTK  EI++++GK LEL+RP+ N+G++ TL+ TE+FG
Sbjct: 1    MYLYNFILQRATGITHAVHGCFAGTKQQEILLSKGKSLELVRPDPNTGKVHTLLQTEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDY VVGSDSGRIVILEYN +KN  +K+HQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMSFRLTGGTKDYAVVGSDSGRIVILEYNAAKNQLEKVHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD+ ARLTISSPLEAHKS T+ Y + G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAIEKQKLVYILNRDSEARLTISSPLEAHKSSTLTYHMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA++ Q+ LTFYELDLGLNHV RK+SEP++  AN L++VPG
Sbjct: 181  MFACLEIDYEEADLDPTGEAAAKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K++F
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QTE GDIFKVTLE D++ V+E+K+KYFDT+P   +MCVLK+G+LF A +FGNH LY
Sbjct: 300  FFLVQTEQGDIFKVTLETDDDVVAEIKLKYFDTVPPATAMCVLKTGFLFVACDFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRPLKNLVMVDEIHSFAPILGCQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSS+R+LR GL VSEMAVS+LPG P+AVWTVKK  +DEFDAYI+VS
Sbjct: 418  EDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIG+TVEEV+DSGFL TTP+L  S +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGDTVEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TI+K   N  QVVIALSGGEL+YFE+D TGQL E  E+ +M  DV C+ + SVP 
Sbjct: 538  APGKKTIIKCAVNSRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSDVMCMALGSVPA 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +R+ FLAVG  DNT+RI+SLDP DC+   S+Q++ S  ESL  +E+      E+G   
Sbjct: 598  GEQRAWFLAVGLADNTVRIISLDPADCLSPRSMQALPSAAESLCIVEMGTGESNEEGTVS 657

Query: 655  PASLF-LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
             A  F LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + G  A+L +SSR
Sbjct: 658  TAGCFYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSSR 717

Query: 714  PWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETA 773
             WL Y ++ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +E+LG  FN+  
Sbjct: 718  TWLSYYYQNRFHLTPLSYETLEYASGFSSEQCAEGIVAISTNTLRILALEKLGAVFNQIT 777

Query: 774  LPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK----ECFEAAGMGEN--GNGN 827
             PL YTP+RF++  +   ++I ETD  A T E +   KK    E  EAAG  E    N  
Sbjct: 778  FPLEYTPKRFLIHNETGKLIISETDHNAYTEETKNIRKKQMADEMREAAGEDEQELANEM 837

Query: 828  MDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
             D   N       + L ++Q+  PKA +  W S IRV+DP + +T   ++L  NEA  S+
Sbjct: 838  ADAFIN-------EVLPEDQFSSPKAGAGMWASQIRVMDPINGHTYSKVQLAQNEAVMSM 890

Query: 888  CTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
              V F   +   ++A G AK L   PK     G+I +Y++      LE  H+T+++  P 
Sbjct: 891  ALVRFTVDQKWYVVA-GVAKDLALNPKIT-NGGFIDVYKYDFHTHQLEHYHRTEIDDAPG 948

Query: 948  ALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFH 1007
            A+C FQGR+L GIG VLR+YDLGKK+LLRKCENK  PN IV+I     R++V D+QES +
Sbjct: 949  AICSFQGRVLVGIGKVLRIYDLGKKKLLRKCENKHIPNQIVNIQAMGSRVFVSDVQESIY 1008

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDP 1067
              KY+R ENQL IFADD+ PRW+T +  +D+DT+A ADKFGN+  +RLP  VSD+++EDP
Sbjct: 1009 CVKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNVSVLRLPHSVSDDVDEDP 1068

Query: 1068 TGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAML 1127
            TG K  W++G LNGA  K E +  FH+G+ + SLQKA+L+PGG ES+IY T+ G++GA++
Sbjct: 1069 TGNKALWDRGLLNGASQKAENVCTFHLGETIMSLQKATLIPGGSESLIYATMSGTVGALV 1128

Query: 1128 AFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQ 1187
             F+SR+D DFF HLEMHMR E+PPLCGRDH+++RS Y+PVK+V+DGDLCEQF ++    Q
Sbjct: 1129 PFTSREDFDFFQHLEMHMRNENPPLCGRDHLSFRSYYYPVKNVMDGDLCEQFTSMDPAKQ 1188

Query: 1188 RKIADELDRTPGEILKKLEEIRNK 1211
            + IA +L RTP E+ KKLE+IR +
Sbjct: 1189 KSIATDLGRTPNEVAKKLEDIRTR 1212


>gi|340721347|ref|XP_003399083.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus terrestris]
 gi|350406701|ref|XP_003487854.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus impatiens]
          Length = 1217

 Score = 1412 bits (3656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/1219 (55%), Positives = 906/1219 (74%), Gaps = 13/1219 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TGI  A++GNFSG+K  EI+V+RGK LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY P+KNVF+K+HQETFGKSGCRRIVPGQY
Sbjct: 61   IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNVFEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD  ARLTISSPLEAHKS+T+VY   G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG AA + Q+ LT YELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADNDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDT+PV ASMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV +++++SL PIM  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ P+++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK+ V++E+DAYI+VS
Sbjct: 418  EDTPELYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TIVK   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ +M  +V C+ + +V  
Sbjct: 538  APGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAV 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA--SVGGEDGA 652
            G +RS FLAVG  DNT+RI+SLDP DC+   S+Q++ +  ESL  +E+ A  +   ED +
Sbjct: 598  GEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDANNSEDLS 657

Query: 653  DHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSS 712
               +SL+LN GLQNGVL RTV+D ++G L+D+R+R+LG RP KLF + + G  A+L +SS
Sbjct: 658  PQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQAVLAMSS 717

Query: 713  RPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNET 772
            R WL Y ++ RF LTPLSYE+LE+A+ FSS+QC EG+V+++ N LR+  +E+LG  FN+ 
Sbjct: 718  RSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQI 777

Query: 773  ALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQME 832
            + PL YTPR+F +      ++IIET+  A T E ++  + +  E           +   E
Sbjct: 778  SFPLEYTPRKFAIHTDSAHLIIIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAVVARE 837

Query: 833  NGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
              +     +P ++  +G P+A    W S IR++ P +  T  +  L+ N AA  +  V F
Sbjct: 838  LAEAFLSEEP-NEAVFGAPRAGPGLWASLIRIIAPTTGQTFEVHRLEQNLAALCLSLVKF 896

Query: 893  HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF 952
             ++     L VG AK  Q  P+ +   G+++ YR   E  +LEL+HKT ++ +PLA+C +
Sbjct: 897  SNQGDQLFLIVGIAKEFQLNPRVS-SGGFLYTYRVNSECTNLELVHKTTLDEVPLAICPY 955

Query: 953  QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            QGR+L G+G +LRLYD+GKK+LLRKCENK  PN +VSIN    RIYV D+QES +  +Y+
Sbjct: 956  QGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYK 1015

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
            R ENQL +FADD+ PRW+T    +D+DT+A ADKFGNI  +RL   ++D+++EDPTG K 
Sbjct: 1016 RQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKA 1075

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSR 1132
             W++G LNGA  K + +  FHVG+ V SLQKA+L+PGG ES++Y T+ G++G ++ F+S 
Sbjct: 1076 LWDRGLLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSH 1135

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIAD 1192
            +D DFF HLEMHMR EHPPLCGRDH+++RS Y+PVK+VIDGDLCEQF ++    Q+ I+ 
Sbjct: 1136 EDHDFFQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPTKQKSISG 1195

Query: 1193 ELDRTPGEILKKLEEIRNK 1211
            +L+RT  E+ KKLE+IR +
Sbjct: 1196 DLERTASEVSKKLEDIRTR 1214


>gi|322797581|gb|EFZ19622.1| hypothetical protein SINV_00421 [Solenopsis invicta]
          Length = 1217

 Score = 1412 bits (3654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/1219 (55%), Positives = 903/1219 (74%), Gaps = 13/1219 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TGI  A++GNFSG+K  EI+V+RGK LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY  +KN F+K+HQETFGKSGCRRIVPGQY
Sbjct: 61   IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIAAKNTFEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD  ARLTISSPLEAHKS+T+VY   G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG AA + Q+ LT YELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDT+PV ASMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV +++++SL PIM  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK+ +++E+DAYI+VS
Sbjct: 418  EDTPQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TIVK   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ +M  +V C+ + +V  
Sbjct: 538  APGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAV 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA--SVGGEDGA 652
            G +RS FLAVG  DNT+RI+SLDP DC+   S+Q++ +  ESL  +E+ A  +   ED A
Sbjct: 598  GEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKEADNSEDAA 657

Query: 653  DHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSS 712
               +SL+LN GLQNGVL RTV+D ++G L+D+R+R+LG RP KLF + + G  A+L +SS
Sbjct: 658  PQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSS 717

Query: 713  RPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNET 772
            R WL Y H+ RF LTPLSYE+LE+A+ FSS+QC EG+V+++ N LR+  +E+LG  FN+ 
Sbjct: 718  RSWLSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQV 777

Query: 773  ALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQME 832
            + PL YTPR+F +      +V+IET+  A T E ++  + +  E               E
Sbjct: 778  SFPLEYTPRKFAIHADSAHLVVIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARE 837

Query: 833  NGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
              +     +P ++  +G P+A    W S +R++ P +  T  +   + N AA  +C V F
Sbjct: 838  LAEAFLSEEP-NEAVFGAPRAGPGLWASMLRIMAPTTGQTFEVHRFEQNLAALCLCLVKF 896

Query: 893  HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF 952
             ++     L VG AK  Q  P R    G+++ Y+   E  S+ELLHK+ ++ +PLA+C +
Sbjct: 897  ANQGDQLFLIVGVAKEFQLNP-RVSNGGFLYTYKVNAECTSIELLHKSPLDEVPLAICPY 955

Query: 953  QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            QGR+L G+G +LRLYD+GKK+LLRKCENK  PN +VSIN    RIYV D+QES +  +Y+
Sbjct: 956  QGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYK 1015

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
            R ENQL +FADD+ PRW+T    +D+DT+A ADKFGNI  +RL   ++D+++EDPTG K 
Sbjct: 1016 RQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDVDEDPTGNKA 1075

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSR 1132
             W++G LNGA  K + +  FHVG+ V SLQKA+L+PGG ES++Y T+ G++G ++ F+S 
Sbjct: 1076 LWDRGLLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSH 1135

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIAD 1192
            +D DFF HLEMHMR EHPPLCGRDH+++RS Y+PVK+VIDGDLCEQF ++    Q+ I+ 
Sbjct: 1136 EDHDFFQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPTKQKSISG 1195

Query: 1193 ELDRTPGEILKKLEEIRNK 1211
            +L+RTP E+ KKLE+IR +
Sbjct: 1196 DLERTPSEVSKKLEDIRTR 1214


>gi|332026090|gb|EGI66238.1| Splicing factor 3B subunit 3 [Acromyrmex echinatior]
          Length = 1217

 Score = 1411 bits (3653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/1219 (55%), Positives = 905/1219 (74%), Gaps = 13/1219 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TGI  A++GNFSG+K  EI+V+RGK LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY  +KN+F+K+HQETFGKSGCRRIVPGQY
Sbjct: 61   IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYISAKNIFEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD  ARLTISSPLEAHKS+T+VY   G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG AA + Q+ LT YELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDT+PV ASMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV +++++SL PIM  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK+ +++E+DAYI+VS
Sbjct: 418  EDTPQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TIVK   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ +M  +V C+ + +V  
Sbjct: 538  APGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAV 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA--SVGGEDGA 652
            G +RS FLAVG  DNT+RI+SLDP DC+   S+Q++ +  ESL  +E+ A  +   ED A
Sbjct: 598  GEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDADNSEDAA 657

Query: 653  DHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSS 712
               +SL+LN GLQNGVL RTV+D ++G L+D+R+R+LG RP KLF + + G  A+L +SS
Sbjct: 658  PQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSS 717

Query: 713  RPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNET 772
            R WL Y H+ RF LTPLSYE+LE+A+ FSS+QC EG+V+++ N LR+  +E+LG  FN+ 
Sbjct: 718  RSWLSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQV 777

Query: 773  ALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQME 832
            + PL YTPR+F +      +V+IET+  A T E ++  +++  +               E
Sbjct: 778  SFPLEYTPRKFAIHTDSAHLVVIETEHNAYTEETKQQRRQQMADEMQEAAGAEEAAVARE 837

Query: 833  NGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
              +     +P ++  +G P+A    W S +R++ P +  T  +   + N AA  +C V F
Sbjct: 838  LAEAFMSEEP-NEAVFGAPRAGPGLWASMLRLMAPTTGETFEVHRFEQNLAALCLCLVKF 896

Query: 893  HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF 952
             ++     L VG AK  Q  P R    G+++ Y+   +  S+ELLHK+ ++ +PLA+C +
Sbjct: 897  ANQGDQLFLIVGVAKEFQLNP-RVSNGGFLYTYKVNPDCTSIELLHKSPLDEVPLAICPY 955

Query: 953  QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            QGR+L G+G +LRLYD+GKK+LLRKCENK  PN +VSIN    RIYV D+QES +  +Y+
Sbjct: 956  QGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYK 1015

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
            R ENQL +FADD+ PRW+T    +D+DT+A ADKFGNI  +RL   ++D+++EDPTG K 
Sbjct: 1016 RQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDVDEDPTGNKA 1075

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSR 1132
             W++G LNGA  K + +  FHVG+ V SLQKA+L+PGG ES++Y T+ G++G ++ F+S 
Sbjct: 1076 LWDRGLLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSH 1135

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIAD 1192
            +D DFF HLEMHMR EHPPLCGRDH+++RS Y+PVK+VIDGDLCEQF ++    Q+ I+ 
Sbjct: 1136 EDHDFFQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPTKQKSISG 1195

Query: 1193 ELDRTPGEILKKLEEIRNK 1211
            +L+RTP E+ KKLE+IR +
Sbjct: 1196 DLERTPSEVSKKLEDIRTR 1214


>gi|157131296|ref|XP_001662180.1| spliceosomal protein sap [Aedes aegypti]
 gi|108881836|gb|EAT46061.1| AAEL002709-PA [Aedes aegypti]
          Length = 1215

 Score = 1407 bits (3643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1224 (56%), Positives = 899/1224 (73%), Gaps = 25/1224 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+  LQ+ TGI  A++G F+GTK  EI++++GK LEL+RP+ N+G++ TL+ TE+FG
Sbjct: 1    MYLYNFILQRATGITHAVHGCFAGTKQQEILLSKGKSLELVRPDPNTGKVHTLLQTEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDY VVGSDSGRIVILEYNP+KN  +K+HQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMSFRLTGGTKDYAVVGSDSGRIVILEYNPAKNQLEKVHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD+ ARLTISSPLEAHKS T+ Y + G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAIEKQKLVYILNRDSEARLTISSPLEAHKSSTLTYHMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G+AA++ Q+ LTFYELDLGLNHV RK+SEP++  AN L++VPG
Sbjct: 181  MFACLEIDYEEADLDPSGEAAAKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QTE GDIFKVTLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF A EFGNH LY
Sbjct: 300  FFLVQTEQGDIFKVTLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVACEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRQLKNLVMVDEIHSYAPILGCQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSS+R+LR GL VSEMAVS+LPG P+AVWTVKK +++EFDAYI+VS
Sbjct: 418  EDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDEEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIG+TVEEV+DSGFL TTP+L+ S +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGDTVEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TI K   N+ QVVIALSGGEL+YFE+D TGQL E  E+ +M  DV C+ + SVP 
Sbjct: 538  APGKKTITKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSDVMCMALGSVPA 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG-AD 653
            G +RS FLAVG  DNT+R++SLDP DC+   S+Q++ S  ESL  +E+      E+G A 
Sbjct: 598  GEQRSWFLAVGLADNTVRVISLDPSDCLSPRSMQALPSAAESLCIVEMGTGDTNEEGVAS 657

Query: 654  HPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
                ++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + G  A+L +SSR
Sbjct: 658  SAGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSSR 717

Query: 714  PWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETA 773
             WL Y  + RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +E+LG  FN+  
Sbjct: 718  TWLSYYFQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQIT 777

Query: 774  LPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK----ECFEAAGMGEN--GNGN 827
             PL YTP+RF++  +   +VI ETD  A T E +   KK    E  EAAG  E    N  
Sbjct: 778  FPLEYTPKRFLIHNETGKLVISETDHNAYTEETKNIRKKQMADEMREAAGEDEQELANEM 837

Query: 828  MDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
             D   N       + L ++ +  PKA +  W S IRV+DP + +T   ++L  NEA  S+
Sbjct: 838  ADAFIN-------EVLPEDVFSAPKAGTGMWASQIRVMDPINGHTYSKVQLAQNEAVLSM 890

Query: 888  CTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
              V F   +   ++A G AK LQ  PK     G+I +Y++      LE  H+T+++  P 
Sbjct: 891  ALVRFAVDQKWYVVA-GVAKDLQMNPKI-ANGGFIDVYKYDVHTHQLEHYHRTEIDDAPG 948

Query: 948  ALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFH 1007
            A+  FQGR+L G+G VLR+YDLGKK+LLRKCENK  PN IV+I     R++V D+QES +
Sbjct: 949  AIAGFQGRVLVGVGRVLRIYDLGKKKLLRKCENKHIPNQIVNIQAMGSRVFVSDVQESIY 1008

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDP 1067
              KY+R ENQL IFADD+ PRW+T +  +D+DT+A ADKFGNI  +RLP  VSD+++EDP
Sbjct: 1009 CIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNIAILRLPHSVSDDVDEDP 1068

Query: 1068 TGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAML 1127
            TG K  W++G LNGA  K E I  FH+G+ + SLQKA+L+PGG ES+IY T+ G++GA++
Sbjct: 1069 TGNKALWDRGLLNGASQKAENICTFHLGETIMSLQKATLIPGGSESLIYATMSGTVGALV 1128

Query: 1128 AFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQ 1187
             F+SR+D DFF HLEMHMR E+ PLCGRDH++YRS Y+PVK V+DGDLCEQF ++    Q
Sbjct: 1129 PFTSREDYDFFQHLEMHMRNENTPLCGRDHLSYRSYYYPVKHVMDGDLCEQFTSMDPAKQ 1188

Query: 1188 RKIADELDRTPGEILKKLEEIRNK 1211
            + IA +L RTP E+ KKLE+IR +
Sbjct: 1189 KSIASDLGRTPNEVAKKLEDIRTR 1212


>gi|66553024|ref|XP_623333.1| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Apis mellifera]
 gi|380015815|ref|XP_003691890.1| PREDICTED: splicing factor 3B subunit 3-like [Apis florea]
          Length = 1217

 Score = 1405 bits (3638), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/1219 (55%), Positives = 905/1219 (74%), Gaps = 13/1219 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TGI  A++GNFSG+K  EI+V+RGK LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY P+KNVF+K+HQETFGKSGCRRIVPGQY
Sbjct: 61   IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNVFEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD  ARLTISSPLEAHKS+T+VY   G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG AA + Q+ LT YELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDT+PV ASMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV +++++SL PIM  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK+ V++E+DAYI+VS
Sbjct: 418  EDTPQLYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TIVK   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ +M  +V C+ + +V  
Sbjct: 538  APGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAI 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA--SVGGEDGA 652
            G +RS FLAVG  DNT+RI+SLDP DC+   S+Q++ +  ESL  +E+ A  +   E+ +
Sbjct: 598  GEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDANNSEELS 657

Query: 653  DHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSS 712
               +SL+LN GLQNGVL RTV+D ++G L+D+R+R+LG R  KLF + + G  A+L +SS
Sbjct: 658  LQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRAVKLFRIKMQGNQAVLAMSS 717

Query: 713  RPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNET 772
            R WL Y ++ RF LTPLSYE+LE+A+ FSS+QC EG+V+++ N LR+  +E+LG  FN+ 
Sbjct: 718  RSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQI 777

Query: 773  ALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQME 832
            + PL YTPR+F +      ++IIET+  A T E ++  + +  E           +   E
Sbjct: 778  SFPLEYTPRKFAIHSDSAHLIIIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAVVARE 837

Query: 833  NGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
              +     +P ++  +G P+A    W S IR++ P +  T  +  L+ N AA  +  V F
Sbjct: 838  LAEAFLSEEP-NEAVFGAPRAGPGLWASLIRIIAPSTGQTFEVHRLEQNLAALCLSLVKF 896

Query: 893  HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF 952
             ++     L VG AK  Q  P+ +   G+++ Y+   E  +LEL+HKT ++ +PLA+C +
Sbjct: 897  ANQGDQLFLIVGIAKEFQLNPRVS-SGGFLYTYKVNSECTNLELVHKTTLDEVPLAICPY 955

Query: 953  QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            QGR+L G+G +LRLYD+GKK+LLRKCENK  PN +VSIN    RIYV D+QES +  +Y+
Sbjct: 956  QGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYK 1015

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
            R ENQL +FADD+ PRW+T    +D+DT+A ADKFGNI  +RL   ++D+++EDPTG K 
Sbjct: 1016 RQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKA 1075

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSR 1132
             W++G LNGA  K + +  FHVG+ V SLQKA+L+PGG ES++Y T+ G++G ++ F+S 
Sbjct: 1076 LWDRGLLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSH 1135

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIAD 1192
            +D DFF HLEMHMR EHPPLCGRDH+++RS Y+P+K+VIDGDLCEQF ++    Q+ I+ 
Sbjct: 1136 EDHDFFQHLEMHMRSEHPPLCGRDHLSFRSYYYPIKNVIDGDLCEQFNSIEPAKQKSISS 1195

Query: 1193 ELDRTPGEILKKLEEIRNK 1211
            +L+RT  E+ KKLE+IR +
Sbjct: 1196 DLERTASEVSKKLEDIRTR 1214


>gi|340367933|ref|XP_003382507.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Amphimedon
            queenslandica]
          Length = 1214

 Score = 1405 bits (3636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 684/1217 (56%), Positives = 902/1217 (74%), Gaps = 12/1217 (0%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+P+ I AA++GNFSG K  E+VVARGKVLELLRP+ N+G++  LVSTE+FG
Sbjct: 1    MHLYALTLQKPSCITAAVHGNFSGRKAQEVVVARGKVLELLRPDPNTGKVVELVSTEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTGS KDYIV+GSDSGRIVILEY+P KNVF+K+HQET+GKSGCRRIVPGQY
Sbjct: 61   LIRSLITFRLTGSTKDYIVLGSDSGRIVILEYDPVKNVFEKVHQETYGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA+MIGA EKQKLVY+LNRD+AARLTISSPLEAHKSHT+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRALMIGAVEKQKLVYILNRDSAARLTISSPLEAHKSHTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +ELDY E+D D TG+AA  AQ+NLT+YELDLGLNHV RK+SEP+D+ ANML+TVPG
Sbjct: 181  LFACLELDYEESDNDHTGEAAQVAQQNLTYYELDLGLNHVVRKYSEPLDDMANMLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA-DL-PAERGVLIVSAATHRQKTLFF 296
            G DGPSGVLVC EN++IYKN G  PD+R  IPRR  DL  A+R +LI+++A H+ K LFF
Sbjct: 241  GTDGPSGVLVCCENYIIYKNFGDQPDIRCPIPRRQNDLDDADRSMLIITSAMHKTKHLFF 300

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            FLLQ+E GDIFKV L+ +++ V  +KIKYFDT+PV +S+CVLKSG LF +SEFGNH LYQ
Sbjct: 301  FLLQSEQGDIFKVMLDVEDDIVVRIKIKYFDTVPVCSSLCVLKSGLLFCSSEFGNHYLYQ 360

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               +G D + E  S   +E  E F   FF PR LKNL+ ++++ESL PIM  +IA+L  E
Sbjct: 361  IAHLGDDSEREFHSDYPLEEGETF---FFGPRPLKNLILVDEMESLSPIMSCQIADLANE 417

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
            + PQ++  CGRGPRSSLR+LR GL V+EMAVS+LPG P AVWTVKK+  ++FD+YIVVSF
Sbjct: 418  DTPQLYAACGRGPRSSLRVLRHGLEVTEMAVSELPGNPHAVWTVKKDSKEDFDSYIVVSF 477

Query: 477  NNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRT 536
             NATL+LSIGETVEEV+DSGFL TTP+LA S +GDD+L+Q++P GIRHIR D R+NEWR+
Sbjct: 478  MNATLILSIGETVEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHIRSDKRVNEWRS 537

Query: 537  PGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPEG 595
            PGKR I +   N  QVVIALSGGE++YFE+D +GQL E  E+ EM+ +V C+ + SVP G
Sbjct: 538  PGKRLIRQCAVNEHQVVIALSGGEIVYFEMDQSGQLNEYTERKEMTAEVICISLGSVPPG 597

Query: 596  RKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHP 655
            ++R RFLAVG  D T+RI+SLDP D +Q LS+Q++ + PESL  + +  +V  +D     
Sbjct: 598  QQRCRFLAVGLSDQTVRIISLDPHDTLQPLSMQALPALPESLCIVNMSGNV-SDDTTVST 656

Query: 656  ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPW 715
              LFLN GLQNGVL RT +D VTG LSD+R+R+LG RP KLF V + G   ++ +SSR W
Sbjct: 657  GGLFLNIGLQNGVLLRTALDNVTGDLSDTRTRYLGTRPVKLFRVRIQGTEGVIAVSSRTW 716

Query: 716  LGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
            L Y ++ RF LTPLSY+ LEYA+SF+S+QC EG+V+++ N LR+  +E+LG  FN+ + P
Sbjct: 717  LNYTYQSRFHLTPLSYDLLEYASSFTSEQCPEGMVAISSNTLRILALEKLGVVFNQVSTP 776

Query: 776  LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGD 835
            L+YTPR+ ++ P    +V+IETD  A T   +   KK+  E   +    +    +     
Sbjct: 777  LQYTPRKLLIHPPMSNLVLIETDHNAFTEATKLHRKKQMAEEM-VSSAADDEKAEAAKAA 835

Query: 836  DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDK 895
            +    + L +  +G PKA    W SC+RV+ P    T  +++ + NEAAFS+    F  K
Sbjct: 836  EAFLAEDLPEHMFGSPKAGRGMWASCLRVMHPNQGKTLDIVQFEQNEAAFSLAVCQFVSK 895

Query: 896  -EHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQG 954
             +    + VGTAK +   P R I +G + ++R   +G  LE +H TQ++ +P+A+  FQG
Sbjct: 896  GDLEWFVVVGTAKDMIITP-RAISSGSLIVFRLSPDGSKLEHVHTTQLDDVPIAMAPFQG 954

Query: 955  RLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRD 1014
            RLL G+G +LR+YD+GKK++LRKCENK  P  +V I     R+YVGD+QE+ HF  YR  
Sbjct: 955  RLLVGVGKLLRIYDIGKKKMLRKCENKHLPYLVVDIKVMGRRVYVGDVQEAVHFLYYRPH 1014

Query: 1015 ENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKW 1074
            ENQL IFAD+ VPR+ T +  +D++T+A ADKFGNI  +RLP DV+D+++EDP+G +  W
Sbjct: 1015 ENQLVIFADEVVPRFCTTSCILDYNTVASADKFGNITILRLPSDVTDQVDEDPSGSRSLW 1074

Query: 1075 EQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDD 1134
            ++G LNGA  K   +  +HVG+ + +L K SL+PGG E ++Y T+ GS+G ++ FSS++D
Sbjct: 1075 DRGFLNGATQKANVMTSYHVGEGINTLHKVSLIPGGSEVLVYTTLSGSIGILVPFSSKED 1134

Query: 1135 VDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADEL 1194
             DFF HLEMHMR E   L GRDH+++RS Y PVK VIDGDLCE + +L    +R+IA +L
Sbjct: 1135 SDFFQHLEMHMRSEWSNLVGRDHLSFRSYYVPVKSVIDGDLCEVYNSLDPSKRREIALDL 1194

Query: 1195 DRTPGEILKKLEEIRNK 1211
            DR+P E+ KKLE++R +
Sbjct: 1195 DRSPSEVAKKLEDLRTR 1211


>gi|308805058|ref|XP_003079841.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
 gi|116058298|emb|CAL53487.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
          Length = 1166

 Score = 1405 bits (3636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/1210 (55%), Positives = 878/1210 (72%), Gaps = 50/1210 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            ++LY+LTLQ+  GI AA  GNFS  K  EIVV R KV+ELLRP++SGR++T+ S E FG 
Sbjct: 2    VHLYNLTLQKSGGITAAAYGNFSAAKAQEIVVVRNKVIELLRPDDSGRVQTVSSMEAFGV 61

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +RS+   RL G+ +DY+ VGSDSGR+VIL++   +N F K+HQETFGKSGCRR+VPGQ++
Sbjct: 62   VRSICALRLAGANRDYLCVGSDSGRVVILQFKKERNAFVKVHQETFGKSGCRRVVPGQFV 121

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
              DPKGRA+ +GA E+ KLVYV+NRD  A LTISSPLEA+KSH I Y +C +DCG DNP+
Sbjct: 122  CADPKGRAICLGAMERSKLVYVMNRDNEANLTISSPLEANKSHAITYHMCALDCGLDNPV 181

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDY E D D TG+  +E QK+LT+YELDLGLNHV RKWSEP+DNGAN L+ VPGG
Sbjct: 182  FAAIELDYGEVDDDPTGEVVAETQKHLTYYELDLGLNHVVRKWSEPIDNGANHLIPVPGG 241

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGP GVLVC ENF+IY++Q H +VRAVIPRR  LP +RGVLIVS+A H+ K  FFFL Q
Sbjct: 242  SDGPGGVLVCCENFIIYRHQDHEEVRAVIPRRTSLPGDRGVLIVSSAGHKSKKSFFFLAQ 301

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +EYGDI+K+++E+  + VSE+K+KYFDTIP   SMCVLK+G+LFAASEFGNHALYQF  I
Sbjct: 302  SEYGDIYKLSIEYSGDKVSEVKVKYFDTIPPCVSMCVLKTGFLFAASEFGNHALYQFAGI 361

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G D  VE+SS++LMETE+G++PVFF PR L NL  I++++SL PI+DM+  NL EE+ PQ
Sbjct: 362  GDDDAVESSSASLMETEQGYEPVFFDPRRLTNLYPIDKIDSLCPILDMQAHNLTEEDTPQ 421

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            ++TLCG G RSSLRILR G+ ++E+A+S LPG P+A++TVKK  +D++D YIVVSF NAT
Sbjct: 422  LYTLCGTGARSSLRILRQGIGMNELAMSSLPGQPNAIFTVKKKSSDQYDGYIVVSFLNAT 481

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVL+IG+TV EVSDSG L TT +L V L+ DDSL+QVH  G+RHI+ D RINEWRTPG++
Sbjct: 482  LVLAIGDTVTEVSDSGILGTTMTLQVCLMNDDSLLQVHAGGLRHIKADKRINEWRTPGRK 541

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
             I K   N  QVVIAL+GGE+IYFE+D  GQL+EVEK E +GD+AC+DIA VPEG  RSR
Sbjct: 542  QISKCTCNSKQVVIALTGGEVIYFELDSAGQLIEVEKLETNGDIACVDIAPVPEGALRSR 601

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVS-SPPESLLFLEVQASVGGEDGADHPASLF 659
            FLA+GSYD T+R++SL+ DDC+Q L+VQ++  S P SLL L+   +   +       SL 
Sbjct: 602  FLAMGSYDGTVRVMSLNSDDCLQTLAVQALKGSTPSSLLILQTAGTESLQ------GSLL 655

Query: 660  LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYI 719
            LN G+ NGVL R  +D V+GQLSD R RFLG R PKL    V G +A++ LSSRPWLGY 
Sbjct: 656  LNVGMANGVLMRATLDQVSGQLSDMRVRFLGTRAPKLVRTSVRGESALVALSSRPWLGYS 715

Query: 720  HRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYT 779
             +G F+L+P+SY  LE   SFSS+ C EGVV+++   LR+ ++ERLGE F++T + LRYT
Sbjct: 716  EKGTFVLSPISYVALEEVCSFSSEACPEGVVAISNQTLRIASVERLGENFHQTTIKLRYT 775

Query: 780  PRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENK 839
            PR     P  K++ +IE+DQ ++   ERE+      EA    E    N        DE++
Sbjct: 776  PRAMSANPDTKMVALIESDQCSVPVGERESP-----EATSADEASEAN-------GDEDE 823

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGT 899
             + L  EQYG PK+    W +C+R++DP+ A +  +LEL  NE+A SIC V +    +  
Sbjct: 824  LNMLPVEQYGAPKSSPGTWAACVRIIDPKDAKSQYVLELGKNESAISICHV-YLTGPNEL 882

Query: 900  LLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAG 959
            LLAVGTA+ L F P RN   G+IH+YR+  + K+L L+H T  EG   ALC ++G LLA 
Sbjct: 883  LLAVGTAQNLTFAP-RNCDGGFIHLYRYGTDSKTLSLVHSTPTEGPVGALCGYRGHLLA- 940

Query: 960  IGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLY 1019
                                               DRIYVGD+QES HF KY+ DE  +Y
Sbjct: 941  ----------------------------XXXXXXXDRIYVGDVQESIHFVKYKADEGSMY 972

Query: 1020 IFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1079
            IFADD+ P ++TAA  +DFDT+AGADKFGNI+  RLP+D+S++++EDPTGGK  + QG L
Sbjct: 973  IFADDTKPAYMTAALPLDFDTLAGADKFGNIFVNRLPKDISEDMDEDPTGGKNIYSQGVL 1032

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS 1139
            NGAPNK E   +  +G+ V +L K +L PGG + ++YGT +G +GA++ F +R ++DFF 
Sbjct: 1033 NGAPNKSETCARTFIGETVCALTKGALQPGGIDIIMYGTFLGGIGALVPFQTRSEIDFFI 1092

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
             LEMHMRQE   + GRDHMA+RS Y PVK+VIDGDLCEQF  L+ ++QR+IA+++DRTPG
Sbjct: 1093 TLEMHMRQEASSIVGRDHMAFRSYYAPVKNVIDGDLCEQFGALAPEVQRRIAEDMDRTPG 1152

Query: 1200 EILKKLEEIR 1209
            EILK+LE+IR
Sbjct: 1153 EILKRLEQIR 1162


>gi|383847297|ref|XP_003699291.1| PREDICTED: splicing factor 3B subunit 3-like [Megachile rotundata]
          Length = 1217

 Score = 1405 bits (3636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/1223 (55%), Positives = 903/1223 (73%), Gaps = 21/1223 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TGI  A++GNFSG+K  EI+V+RGK LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY P+KN+F+K+HQETFGKSGCRRIVPGQY
Sbjct: 61   IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNIFEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD  ARLTISSPLEAHKS+T+VY   G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG AA + Q+ LT YELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDT+PV ASMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV +++++SL PIM  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK+ V++E+DAYI+VS
Sbjct: 418  EDTPQLYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TIVK   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ +M  +V C+ + +V  
Sbjct: 538  APGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAI 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RS FLAVG  DNT+RI+SLDP DC+   S+Q++ +  ESL  +E+    G +D  + 
Sbjct: 598  GEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEM----GAKDANNS 653

Query: 655  PASL------FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                      +LN GLQNGVL RTV+D ++G L+D+R+R+LG RP KLF + + G  A+L
Sbjct: 654  EELSSQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQAVL 713

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYE+LE+A+ FSS+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714  AMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
            FN+ + PL YTPR+F +      ++IIET+  A T E ++  + +  E           +
Sbjct: 774  FNQISFPLEYTPRKFAIHSDSAHLIIIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAV 833

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
               E  +     +P ++  +G P+A    W S IR++ P +  T  +  L+ N AA  + 
Sbjct: 834  VARELAEAFLSEEP-NEAVFGAPRAGPGLWASLIRIIAPTTGQTFEVHRLEQNLAALCLS 892

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             V F ++     L VG AK  Q  P+ +   G+++ Y+   E  SLEL+HKT ++ +PLA
Sbjct: 893  LVKFVNQGDQLFLIVGIAKEFQLNPRLS-SGGFLYTYKVNTECTSLELVHKTTLDEVPLA 951

Query: 949  LCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHF 1008
            +C +QGR+L G+G +LRLYD+GKK+LLRKCENK  PN IVSIN    RIYV D+QES + 
Sbjct: 952  ICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAIVSINAIGQRIYVSDVQESVYA 1011

Query: 1009 CKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1068
             +Y+R ENQL +FADD+ PRW+T    +D+DT+A ADKFGNI  +RL   ++D+++EDPT
Sbjct: 1012 VRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPT 1071

Query: 1069 GGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLA 1128
            G K  W++G LNGA  K + +  FHVG+ V SLQKA+L+PGG ES++Y T+ G++G ++ 
Sbjct: 1072 GNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVP 1131

Query: 1129 FSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQR 1188
            F+S +D DFF HLEMHMR EHPPLCGRDH+++RS Y+PVK+VIDGDLCEQF ++    Q+
Sbjct: 1132 FTSHEDHDFFQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPAKQK 1191

Query: 1189 KIADELDRTPGEILKKLEEIRNK 1211
             IA +L+RTP E+ KKLE+IR +
Sbjct: 1192 SIAGDLERTPSEVSKKLEDIRTR 1214


>gi|91092128|ref|XP_972649.1| PREDICTED: similar to AGAP005549-PA [Tribolium castaneum]
 gi|270004662|gb|EFA01110.1| hypothetical protein TcasGA2_TC010322 [Tribolium castaneum]
          Length = 1219

 Score = 1401 bits (3626), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 691/1227 (56%), Positives = 898/1227 (73%), Gaps = 27/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ T I  AI+GNFSGTK  EIV++RGK LE+LRP+ N+G++ TL++ EIFG
Sbjct: 1    MYLYNLTLQRATAITHAIHGNFSGTKMQEIVISRGKSLEVLRPDPNTGKVHTLLTVEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RSL  FRLTG  KD+++VGSDSGRIVILEY PSKN F+K+HQETFGKSG RRIVPGQY
Sbjct: 61   VVRSLMSFRLTGGTKDFVIVGSDSGRIVILEYIPSKNNFEKVHQETFGKSGVRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DP+GRAVMIGA EKQKL Y+LNRD  ARLTISSPLEAHKS+T+VY + G+D G+DNP
Sbjct: 121  LATDPRGRAVMIGAVEKQKLAYILNRDVQARLTISSPLEAHKSNTLVYHMVGVDVGYDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D +G+AA + Q+ LTFYELDLG+NHV RK+SEP++  AN LVTVPG
Sbjct: 181  MFACLEIDYEEADSDPSGEAAQKTQQTLTFYELDLGVNHVVRKYSEPLEEHANFLVTVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GDDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDT+PV ++MCVLK+G+LF  SEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVASAMCVLKTGFLFVTSEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV ++++ESL PI+  R+A+L  
Sbjct: 360  QIAHLGDDDD-ELEFSSAMPLEEG-DTFFFAPRSLRNLVLVDEMESLSPILSCRVADLAG 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTVK+  +DE+DAYI+VS
Sbjct: 418  EDTPQLYMLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRSDDEYDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S + DD+L+QV+P GIRHI  D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALSDDALVQVYPGGIRHICSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACLDIASVPE 594
             PGK+TIVK   N+ QVVIALSGGEL YFE+D TGQL E  E+  M+ DV C+ +A+V  
Sbjct: 538  APGKKTIVKCAINQRQVVIALSGGELAYFEMDPTGQLHEYKERKRMNADVVCMALANVAP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGED---G 651
            G + S FLAVG  D+T+RI+SLDP DC+   S+Q +    ESL  +E+  +    D    
Sbjct: 598  GEQLSLFLAVGLADSTVRIISLDPSDCLAPRSIQGLPVCAESLCIVEMGCTDREPDNAAA 657

Query: 652  ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
            A   ++L+LN GL NG L R V+D V+G+LSD+R+R+LG RP KLF + +    A+L +S
Sbjct: 658  ASTTSTLYLNIGLTNGALLRNVLDPVSGELSDTRTRYLGSRPVKLFRIRMQQSEAVLAMS 717

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            SR WL Y ++ RF LTPLSYE+LEYA+ FSS+QC EG+V+++ N LR+  +E+LG  FN+
Sbjct: 718  SRSWLSYYYQSRFYLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQ 777

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAK----KECFEAAGMGEN--GN 825
             + PL YTPR+F++ P+   ++IIET+  A T E ++  +    +E  EAAG  E     
Sbjct: 778  VSFPLEYTPRKFIIHPESNNLLIIETEHNAYTEETKKQRRLQMAEEMKEAAGEEEQELAK 837

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
               D   N D       L +  +  PKA    W S ++++DP        + L+ NEAA 
Sbjct: 838  EMADAFLNED-------LPESIFSAPKAGHGMWASTLKIMDPVQGIVHKCIRLEQNEAAM 890

Query: 886  SICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            S   V F ++   TL L VG +K  Q  P R+   G++  Y+    G+ LE +H+T V+ 
Sbjct: 891  SSVLVKFQNQPQQTLFLIVGISKDFQLNP-RHCNTGFLDTYKMDPMGRELEFVHRTPVDE 949

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +P+ALC + G LLAG+G +LRLYD+GKK+LLRKCENK  PN IV+I     RI+V D+QE
Sbjct: 950  VPMALCAYNGLLLAGVGRMLRLYDMGKKKLLRKCENKHIPNAIVNIQAMGKRIFVSDVQE 1009

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S    +Y+R ENQL IFADD+ PRW+T    +D+DT+A ADKFGNI  +RLP +VSD++E
Sbjct: 1010 SVFMVRYKRAENQLIIFADDTHPRWVTCNCVLDYDTVAVADKFGNIAILRLPPNVSDDVE 1069

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K + I  FHVG+ VT LQKA+L+PGG ES+IY T+ GS+G
Sbjct: 1070 EDPTGHKSLWDRGLLNGASQKADTIATFHVGETVTWLQKATLIPGGWESLIYTTLSGSVG 1129

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F+SR+D DFF HLEMHMR E+ PLCGRDH+++RS YFPVK+VIDGDLCEQ+ +L  
Sbjct: 1130 VLVPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYFPVKNVIDGDLCEQYNSLEP 1189

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
              Q+ IA +LDRTP E+ KKLE+IR +
Sbjct: 1190 VKQKSIASDLDRTPAEVSKKLEDIRTR 1216


>gi|357606250|gb|EHJ64976.1| putative Splicing factor 3B subunit [Danaus plexippus]
          Length = 1216

 Score = 1397 bits (3617), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/1227 (56%), Positives = 899/1227 (73%), Gaps = 30/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ  T I  A++GNFSGTK  EI+++RGK LELLRP+ N+G++ TL+  EIFG
Sbjct: 1    MYLYNLTLQGSTAISHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTLMKVEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+  FRLTG  KDYIVVGSDSGRIVILEY P+KN+ +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   VIRSMMSFRLTGGTKDYIVVGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMIGA EKQKLVY+LNRD  ARLTISSPLEAHKS+T+VY + G+D GF+NP
Sbjct: 121  LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA + Q+ LTFYELDLGLNHV RK+SEP++  AN L+TVPG
Sbjct: 181  MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+T+E D + V+E+K+KYFDT+PV  +MCVLK+G+LF A EFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATAMCVLKTGFLFVACEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV +++++SL PI+   +A+L  
Sbjct: 360  QIAHLG-DEDDEPEFSSAMPLEEG-DTFFFAPRPLRNLVLVDELDSLSPILACHVADLTG 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR LR GL V+EMAVS+LPG P+AVWTV+++ +D++D+YI+VS
Sbjct: 418  EDTPQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDDDYDSYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+   +G D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++IVK   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ ++S DV+C+ + SV  
Sbjct: 538  APGKKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVAT 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +R+ FLAVG  DNT+RI+SLDP DC+   S+Q++ + PESL  ++     G +     
Sbjct: 598  GEQRAWFLAVGLVDNTVRIISLDPADCLAPRSMQALPASPESLCIVDQPFESGAK----- 652

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
             ++L LN GL NGVL RT +D V+G L+D+R+R+LG RP KLF V V    A+L +SSR 
Sbjct: 653  -SALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSAEAVLAVSSRT 711

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            WLGY ++ RF LTPLSYE LEYAA FSS+QC EG+V+++ N LR+  +E+LG  FN+T  
Sbjct: 712  WLGYQYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQTFQ 771

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAK----KECFEAAGMGENGNGNMDQ 830
             L YTPR+FV+      ++++ETD  A T E ++  +    +E  EAA     G     Q
Sbjct: 772  QLDYTPRKFVINSDNNHIIVLETDHNAYTEEMKKQRRVQMAQEMREAAA---GGTPEEQQ 828

Query: 831  MENG-DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS----ANTTCLLELQDNEAAF 885
            + N   D    D L +  +  PKA +  W S IR+LD        +T CLL L+ NEAA 
Sbjct: 829  LANEMADAFLSDVLPENIFSSPKAGAGMWASQIRILDMSGGVGGCSTVCLLPLEQNEAAV 888

Query: 886  SICTVNFHDKEHGT-LLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            S+C V +      T  L VG AK     P R+   G +H+Y+    GK LEL+HKT ++ 
Sbjct: 889  SLCVVRWAALTDNTPHLVVGVAKDALLSP-RSCSEGSLHVYKIYNTGK-LELVHKTPIDE 946

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P AL  F G+LLAG+G +LRLYD+G+++LLRKCEN+  PN I  I T R RI+V D+QE
Sbjct: 947  YPGALAAFNGKLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTIRQRIFVSDVQE 1006

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S    KY++ ENQL IFADD+ PRW+T    +D+DT+A ADKFGN+  +RLPQ VSD+++
Sbjct: 1007 SVFCVKYKKRENQLIIFADDTNPRWITNTCILDYDTVAMADKFGNVAVLRLPQSVSDDVD 1066

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG K  W++G LNGA  K +  V FHVG+ VTSLQ+A+L+PGG E+++Y TV G+LG
Sbjct: 1067 EDPTGNKALWDRGLLNGASQKGDITVNFHVGETVTSLQRATLIPGGSEALLYATVSGALG 1126

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
              L F+SR+D DFF HLEMHMR E+ PLCGRDH+++RS Y+PVK+VIDGDLCEQF +L  
Sbjct: 1127 VFLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEP 1186

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNK 1211
              Q+ IA +L+RTP E+ KKLE+IR +
Sbjct: 1187 AKQKAIAGDLERTPAEVSKKLEDIRTR 1213


>gi|351712542|gb|EHB15461.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
          Length = 1240

 Score = 1396 bits (3613), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/1269 (55%), Positives = 911/1269 (71%), Gaps = 90/1269 (7%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + ++        T+ +  S    ++ YL+  +  G     
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMLA--------TVGMNKSFVSAENCYLYQIAHLG----- 346

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
                   D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 347  -------DDDEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 398

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 399  EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 458

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 459  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 518

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 519  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 578

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E    +GG +  D 
Sbjct: 579  GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVE----MGGTEKQDE 634

Query: 655  PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                     L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 635  LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 694

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 695  AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 754

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
            FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 755  FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 814

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
                +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAA
Sbjct: 815  LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 869

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE 
Sbjct: 870  FSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 928

Query: 945  IPLAL----------------------------CQ--------------FQGRLLAGIGP 962
            +P A+                            C+              FQGR+L G+G 
Sbjct: 929  VPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKTPVEEVPAAIAPFQGRVLIGVGK 988

Query: 963  VLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFA 1022
            +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QESF + +Y+R+ENQL IFA
Sbjct: 989  LLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFA 1048

Query: 1023 DDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA 1082
            DD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W++G LNGA
Sbjct: 1049 DDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGA 1108

Query: 1083 PNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE 1142
              K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +D DFF H+E
Sbjct: 1109 SQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVE 1168

Query: 1143 MHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEIL 1202
            MH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++ELDRTP E+ 
Sbjct: 1169 MHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVS 1228

Query: 1203 KKLEEIRNK 1211
            KKLE+IR +
Sbjct: 1229 KKLEDIRTR 1237


>gi|312370905|gb|EFR19207.1| hypothetical protein AND_22901 [Anopheles darlingi]
          Length = 1287

 Score = 1395 bits (3610), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1231 (56%), Positives = 902/1231 (73%), Gaps = 40/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+  LQ+ TGI  A++G+F+GTK  EI++A+GK LEL+RP+ N+G++ TL+ TE+FG
Sbjct: 74   MYLYNFILQRATGITHAVHGSFAGTKLQEILLAKGKGLELVRPDPNTGKVHTLLQTEVFG 133

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RSL  FRLTG  KDY V+GSDSGRIVILEYNP KN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 134  VVRSLMSFRLTGGSKDYAVIGSDSGRIVILEYNPVKNQLEKVHQETFGKSGCRRIVPGQY 193

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            L++DPKGRAVMIGA EKQKLVY+LNRD+ ARLTISSPLEAHKS+T+ Y + G+D GF+NP
Sbjct: 194  LSIDPKGRAVMIGAIEKQKLVYILNRDSEARLTISSPLEAHKSNTLTYHMVGVDVGFENP 253

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA++ Q+ LTFYELDLGLNHV RK+SEP++   N L++VPG
Sbjct: 254  MFACLEIDYEEADGDPTGEAAAKTQQTLTFYELDLGLNHVVRKYSEPLEEHVNFLISVPG 313

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 314  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 372

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QTE GDIFKVTLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF A EFGNH LY
Sbjct: 373  FFLVQTEQGDIFKVTLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVACEFGNHYLY 432

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR LKNLV ++ + S  PI+  ++A+L  
Sbjct: 433  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRQLKNLVMVDDIPSYAPILGCQVADLAN 490

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRSS+R+LR GL VSEMAVS+LPG P+AVWTVKK ++DEFDAYI+VS
Sbjct: 491  EDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVS 550

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIG+TVEEV+DSGFL   P      +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 551  FVNATLVLSIGDTVEEVTDSGFL--VP------LGDDALVQVYPDGIRHIRADKRVNEWK 602

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TI+K   N+ QVVIALSGGEL+YFE+D TGQL E  E+ +M  +V C+ + SVP 
Sbjct: 603  APGKKTIMKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGSVPS 662

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV----QASVGGED 650
            G +RS FLAVG  DNT+RI+SLDP DC+   S+Q++ S  ESL  +E+     A+   +D
Sbjct: 663  GEQRSWFLAVGLADNTVRIISLDPSDCLSPRSMQALPSAAESLCIVEMGTVETAANDDDD 722

Query: 651  GADHP----ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
              D P      ++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + G  A
Sbjct: 723  DDDAPLKTSGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIQMQGSEA 782

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
            +L +SSR WL Y ++ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +E+LG
Sbjct: 783  VLAMSSRSWLSYYYQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLG 842

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK----ECFEAAGMGE 822
              FN+ + PL YTP+RF +  +   ++I ETD  A T E +   K+    E  EAAG  E
Sbjct: 843  AVFNQISFPLEYTPKRFAIHAETGKLIISETDHNAYTEETKTVRKRQMADEMREAAGDDE 902

Query: 823  N--GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
                N   D   N       + L ++ +  PKA +  W S IRV+DP + +T   ++L  
Sbjct: 903  QELANEMADAFIN-------EVLPEDVFSAPKAGTGMWASQIRVMDPINGHTYSKVQLAQ 955

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEA  S+  V F   +   ++A G AK LQ  PK     G+I +YR   +   LE +H+T
Sbjct: 956  NEAVLSLALVRFAVDQKWYVVA-GVAKDLQINPKIG-NGGFIDVYRVDNQTNELEHVHRT 1013

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +++  P ALC FQGRLLAGIG VLR+YDLGKK+LLRKCENK  PN IV+I     R+YV 
Sbjct: 1014 EIDDAPGALCAFQGRLLAGIGKVLRMYDLGKKKLLRKCENKHIPNQIVNIQGMGQRVYVS 1073

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+QES +  KY+R ENQL IFADD+ PRW+T+A  +D+DT+A  DKFGNI  +RLP  VS
Sbjct: 1074 DVQESVYCLKYKRPENQLIIFADDTHPRWVTSATLLDYDTVATGDKFGNIAVLRLPHSVS 1133

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            D+++EDPTG K  W++G LNGA  K E I  FH+G++V SLQKA+L+PGG ES+IY T+ 
Sbjct: 1134 DDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGEIVMSLQKATLIPGGSESLIYATMS 1193

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++GA++ F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS Y+PVK+V+DGDLCEQF 
Sbjct: 1194 GTVGALVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSYYYPVKNVMDGDLCEQFT 1253

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +L    Q+ IA +L RTP E+ KKLE+IR +
Sbjct: 1254 SLDPAKQKSIASDLGRTPSEVAKKLEDIRTR 1284


>gi|195169735|ref|XP_002025674.1| GL20829 [Drosophila persimilis]
 gi|194109167|gb|EDW31210.1| GL20829 [Drosophila persimilis]
          Length = 1225

 Score = 1390 bits (3599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1231 (55%), Positives = 896/1231 (72%), Gaps = 29/1231 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TG+  A++GNFSG K  EI+++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEILLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FRLTG  KDYIVVGSDSGRIVILEY P+KN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61   CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYMPAKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY E+D D TG AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181  MFACLEIDYEESDLDPTGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P  ++MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPASAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRTLKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK  +DEFDAYI+VS
Sbjct: 418  EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  + +GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK++I K   N+ QVVI LSG EL+YFE+D TG+L E  E+ EM  ++ C+ + +VP+
Sbjct: 538  APGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPD 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV-----QASVGGE 649
            G +RS FLAVG  DNT+RILSLDP++C+   S+Q++ SP ESL  +E+       S G  
Sbjct: 598  GEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTSAGAL 657

Query: 650  DGADHP-------ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
            D    P        +++LN GL NGVL RTV+D V+G L+D+R+R+LG RP KLF + + 
Sbjct: 658  DDDAPPQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQ 717

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            G  A+L +SSR WL Y H+ RF LTPLSYETLEYA+ FSS+QC EG+V+++ N LR+  +
Sbjct: 718  GAEAVLAMSSRSWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILAL 777

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+LG  FN+ A PL++TPR FV+ P    M+I ETD  A T E+ ++A+KE         
Sbjct: 778  EKLGAVFNQVAFPLQFTPRTFVIHPDTGRMLIAETDHNAYT-EDTKSARKEQMAEEMRSA 836

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE-LQDN 881
             G+   +      +    + L ++ +  PKA +            R   T C+ + +   
Sbjct: 837  AGDEERELAREMANAFINEVLPEDVFSAPKAGA----GVCGASQIRCPGTPCMGQTMFKT 892

Query: 882  EAAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
             A  S+  V F     G   LAVG A+ LQ  P R    G + IY+      SLE +H+T
Sbjct: 893  RAIMSMAMVKFSVAADGRYYLAVGIARDLQLNP-RISQGGCLDIYKIDPTCSSLEFMHRT 951

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +++ IP ALC FQGRLLAG G +LR+YDLGKK++LRKCENK  P  IV+I     R+YV 
Sbjct: 952  EIDEIPGALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVS 1011

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+QES  F +YRR ENQL IFADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V+
Sbjct: 1012 DVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVT 1071

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            D+++EDPTG K  W++G L+GA  K E I  FHVG+++ SLQKA+L+PGG E++IY T+ 
Sbjct: 1072 DDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYSTLN 1131

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++GA + F+SR+D DFF HLEMHMR E+PPLCGRDH++YRS+Y+PVK+V+DGDLCEQ+ 
Sbjct: 1132 GTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYL 1191

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            ++    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 1192 SIEAAKQKSIAGDMFRTPNQICKKLEDIRTR 1222


>gi|334313376|ref|XP_003339894.1| PREDICTED: splicing factor 3B subunit 3-like [Monodelphis domestica]
          Length = 1202

 Score = 1389 bits (3594), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1228 (56%), Positives = 908/1228 (73%), Gaps = 46/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+R K+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSREKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY    ++ TG       K+  F  +D+         + P     N+ + +PG
Sbjct: 181  MFACLEMDYEV--KEGTGLE----NKDKKFGGVDV---------THPSYMIQNVTI-LPG 224

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG + V +AT + K++F
Sbjct: 225  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRKELDDP-ERGKIFVCSATPKNKSMF 283

Query: 296  FFLLQTEYGDIFKVTLEHD-NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
            FFL QT  GDIF++TLE D N  V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH L
Sbjct: 284  FFLGQTGQGDIFQITLETDENMGVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYL 343

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
            YQ   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L 
Sbjct: 344  YQIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLA 401

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
             E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+V
Sbjct: 402  NEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIV 461

Query: 475  SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEW 534
            SF NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW
Sbjct: 462  SFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEW 521

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVP 593
            +TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP
Sbjct: 522  KTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVP 581

Query: 594  EGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGAD 653
             G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D
Sbjct: 582  PGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGAEKQD 637

Query: 654  HPAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
                      L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+
Sbjct: 638  ELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAV 697

Query: 708  LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGE 767
            L +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG 
Sbjct: 698  LAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGA 757

Query: 768  TFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGEN 823
             FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E 
Sbjct: 758  VFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDER 817

Query: 824  GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEA 883
                 +      +EN    L +  +G PKA + +W S +RV++P   NT  L++L+ NEA
Sbjct: 818  ELA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEA 872

Query: 884  AFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE 943
            AFS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE
Sbjct: 873  AFSVAVCRFSNTGDDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNSGEKLEFLHKTPVE 931

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
             +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+Q
Sbjct: 932  EVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQ 991

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            ESF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE+
Sbjct: 992  ESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEV 1051

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL 1123
            +EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +
Sbjct: 1052 DEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGI 1111

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
            G ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++ 
Sbjct: 1112 GILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSME 1171

Query: 1184 LDLQRKIADELDRTPGEILKKLEEIRNK 1211
             + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 1172 PNKQKNVSEELDRTPPEVSKKLEDIRTR 1199


>gi|307109500|gb|EFN57738.1| hypothetical protein CHLNCDRAFT_56079 [Chlorella variabilis]
          Length = 1144

 Score = 1387 bits (3591), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1227 (56%), Positives = 880/1227 (71%), Gaps = 97/1227 (7%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LY+LTL +P+ I  AI GNFS  K  EIV ARGKVLELLRP+++G+++ + STE+FG 
Sbjct: 1    MHLYNLTLSRPSAISCAIYGNFSAPKVHEIVAARGKVLELLRPDDAGKVQVIHSTEVFGI 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLA FR  G+Q+DY++ GSDSGRIVIL+YN  KN F +IH ETFGKSGCRRIVPG+YL
Sbjct: 61   IRSLAPFRFPGAQQDYVICGSDSGRIVILQYNKEKNCFTRIHTETFGKSGCRRIVPGEYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRA MI A EK K VYVLNRD  ARLTISSPLEAHK   + Y++ G+D GFDNP+
Sbjct: 121  AVDPKGRACMIAAVEKSKFVYVLNRDNDARLTISSPLEAHKGSNLCYALTGLDMGFDNPV 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDY+EAD D TG+AASEAQK+LT YELDLGLNHV RK+SEPVDNGANML+ VPG 
Sbjct: 181  FAAIELDYAEADTDPTGEAASEAQKHLTMYELDLGLNHVVRKYSEPVDNGANMLIPVPGA 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGP G              G P  RA       LPA      + A +            
Sbjct: 241  GDGPGGQRAV---------WGGPCARA-----EKLPA-----CMHACS------------ 269

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
             E+GDI++VTL+++ E V EL+IKYFD+IP   S+C+++ G+LFAASEFG+HALYQF ++
Sbjct: 270  -EFGDIYRVTLDYEGEQVKELRIKYFDSIPPATSICLMRKGFLFAASEFGDHALYQFSSL 328

Query: 361  GADPD--VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
            G D +  VE+SS+TLMETEEG+QPVFF PR L NL  +++++SL PI+DM++ANL  EE 
Sbjct: 329  GDDDEGGVESSSATLMETEEGYQPVFFDPRPLSNLEALDRMDSLAPILDMKVANLAGEEI 388

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVS------EMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            PQI+  CGRG RS+LR+LRPGLAV+      EMAVS LPG P+AVWT+K++V DEFDAYI
Sbjct: 389  PQIYAACGRGSRSTLRVLRPGLAVTGKRAAHEMAVSPLPGNPTAVWTIKRSVGDEFDAYI 448

Query: 473  VVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN 532
            VVSF+NATLVLSIGETVEEV+DSGF    P+L   L+ DDS++QV+P+G+RHIR D RIN
Sbjct: 449  VVSFSNATLVLSIGETVEEVNDSGFNGNVPTLQTQLLADDSMLQVYPNGLRHIRPDRRIN 508

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            EWR PG++TIVK  +N  QV IAL GGE+IYFE++  G L+E EK EM GDVACLD+A V
Sbjct: 509  EWRAPGRKTIVKATTNERQVAIALGGGEVIYFELNPQGMLVESEKREMGGDVACLDVAPV 568

Query: 593  PEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGA 652
            PEGR R  FLAVG YD   R+LSL PD  +++LS Q+V + PES+L L+  + + G+DG 
Sbjct: 569  PEGRTRCAFLAVGMYDGAARVLSLQPDSTLKVLSTQAVGATPESVLLLD--SPLMGKDGT 626

Query: 653  DHPA---SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
            +  A   +LFL  GL NGVL RT VD VTGQLSD+R+RFLG +PPKLF+  V        
Sbjct: 627  EEGAGSGALFLQVGLVNGVLLRTEVDRVTGQLSDTRTRFLGTKPPKLFAAAV-------- 678

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
                                                 EG V+VA N LRV T+ERLGE F
Sbjct: 679  ------------------------------------PEGFVAVARNTLRVITLERLGEFF 702

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEERE--AAKKECFEAAGMGENGNGN 827
            N+ +L LRYTPR+FV+ P  K++ I E D  A+   +RE    +++  EA    E   G 
Sbjct: 703  NQQSLRLRYTPRKFVIHPDLKVLAIAEADHAAIPLAQREDLQQRRDGMEA----EQQGGA 758

Query: 828  MDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
                  G + ++     ++Q+G PK E  +W SC+R++DP S  TT  +E++DNEAA S+
Sbjct: 759  TAAAAAGPEMDEEAAAREDQWGAPKGEPGQWASCVRIVDPVSLQTTHCIEMEDNEAALSV 818

Query: 888  CTVNFHDK-EHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIP 946
            C V F    EHGTLLAVGTA+GL+F+PK     G++H+YRF+++GK +ELLHKT VEG+P
Sbjct: 819  CLVEFDSHPEHGTLLAVGTAQGLKFYPK-ECQNGFVHLYRFLDDGKRIELLHKTAVEGVP 877

Query: 947  LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESF 1006
             A+  F+GRLL G+  VLRLYD+GKKR+LRKCE +  P  I +++    RIYVGD QES 
Sbjct: 878  GAMAAFKGRLLVGVDAVLRLYDMGKKRMLRKCEYRRLPTRIATLHVSGSRIYVGDGQEST 937

Query: 1007 HFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEED 1066
             F +Y++ +NQ YIFADD VPR +TAA H+D+DT+AGAD+FGN++  RLPQ+VS ++E+D
Sbjct: 938  FFMRYKKGDNQFYIFADDIVPRHVTAALHLDYDTLAGADRFGNVFVSRLPQEVSAQVEDD 997

Query: 1067 PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAM 1126
            PTGGK   E G L GAPNK+  I  FHVG+ VT+LQ+A L PGG E ++YGT+ G++G +
Sbjct: 998  PTGGKYATETGLLGGAPNKLRTINSFHVGETVTALQRAVLQPGGRELIVYGTINGAIGVL 1057

Query: 1127 LAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDL 1186
              F+S++D DFF HLEMHMRQEHPPL GRDH+AYRS YFPVKDV+DGDLCEQ+P L+ D 
Sbjct: 1058 YPFTSKEDCDFFQHLEMHMRQEHPPLLGRDHLAYRSFYFPVKDVVDGDLCEQYPQLAADK 1117

Query: 1187 QRKIADELDRTPGEILKKLEEIRNKIV 1213
             R +A+ELDR+PGE+LKKLE+IRNK+V
Sbjct: 1118 ARGVAEELDRSPGEVLKKLEDIRNKLV 1144


>gi|328717412|ref|XP_003246201.1| PREDICTED: splicing factor 3B subunit 3-like [Acyrthosiphon pisum]
          Length = 1218

 Score = 1384 bits (3581), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 664/1222 (54%), Positives = 894/1222 (73%), Gaps = 18/1222 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY++TLQ+ +GI  AI+GNFSG K  EI+V+RGK LEL+RP+ N+G++ TL++ E+FG
Sbjct: 1    MYLYNMTLQRGSGITHAIHGNFSGGKVQEILVSRGKSLELMRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FR +G  KDYIVVGSDSGRIVILEY PSKNV DK+HQETFGKSGCRRIVPGQY
Sbjct: 61   IIRALMSFRQSGGTKDYIVVGSDSGRIVILEYLPSKNVLDKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRA+MIGA EKQKLVY+ NRD  ARLTISSPLEA+KS+T+VY + GID  FDNP
Sbjct: 121  LAIDPKGRAIMIGAVEKQKLVYIPNRDAEARLTISSPLEANKSNTLVYHMVGIDVAFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFA +E+DY E D D TG+A    ++ LTFYE+D GLNHV RK+SEP++  AN L+TVPG
Sbjct: 181  IFACLEIDYEEVDADPTGEAVQTTRQTLTFYEVDFGLNHVVRKYSEPLEEHANSLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
              DGP GVL+C+EN++ YKNQG   D+R  IPRR    D P ERG+++V +ATH+ K++F
Sbjct: 241  DKDGPGGVLICSENYITYKNQGEQSDIRCPIPRRRNDLDDP-ERGMILVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QTE GD+FKVTLE + E V+E+++KYFDT+PV ++MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLVQTEQGDVFKVTLETNEEFVTEIRLKYFDTVPVASAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV +++++SL PIM  ++A+L  
Sbjct: 360  QIANLGDDDD-EPEFSSAMPLEEG-DTFFFAPRQLRNLVLVDEMDSLSPIMACQVADLAA 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRG RS+LR+LR GL VSEMAVS+LPG P+AVWTVK+  ++ FDAYI+VS
Sbjct: 418  EDTPQLYMACGRGSRSTLRVLRHGLEVSEMAVSELPGSPNAVWTVKRRADENFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F+NATLVLSIGETVEEVSDSGFL TTP+L+ S +GDD+++Q++P+G+RHIR D R+++W+
Sbjct: 478  FSNATLVLSIGETVEEVSDSGFLGTTPTLSCSPLGDDAVVQIYPNGVRHIRSDKRMHDWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             P K+ IVK  +N+ QVVIAL GGEL+YFE+D TG L E  ++ EM+ DV C+ +A+ P 
Sbjct: 538  APEKKKIVKCAANQRQVVIALGGGELVYFEMDPTGHLNEHKDRKEMNSDVLCMALANAPS 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G + SRFLAVG  D T+RI+SLD  DC+  L +Q++ + PESL  +E+ AS GG   +D 
Sbjct: 598  GEQMSRFLAVGLTDETVRIISLDTTDCLVQLKMQAIPAMPESLCIVEMGASDGG--SSDE 655

Query: 655  PAS-----LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
            PA      L+LN GLQNGVL RTV+D VTG+++D+R+R+LG +P KLF +   G  A+L 
Sbjct: 656  PAMNSLSMLYLNIGLQNGVLLRTVLDGVTGEMADTRARYLGGKPVKLFKIRTRGNEAVLA 715

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
            +SSR WL Y ++ RF LTPLSYE+LEYA+ FSS+QC EG+V+++GN LR+  +E+LG  F
Sbjct: 716  MSSRSWLSYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISGNTLRILALEKLGAVF 775

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            N+ + P+ YTPR+FV+ P    ++++ET+  A T + ++  + +  E             
Sbjct: 776  NQVSFPVEYTPRKFVIHPDSAHLIVVETEHNAYTEQTKKQRRIQMAEEMQEAAGEEEQEL 835

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
              E  +     D L +  +G PKA    W S +R+ +P    T  +     NEA  S+  
Sbjct: 836  AKEMAEAFLNED-LPENIFGAPKAGPGMWASLVRLFNPVQGITEAVYRFPQNEAVMSVAL 894

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLAL 949
            V F        +  G A  L   P R++  GYI+ Y+      SLEL+HKT V+ +P A+
Sbjct: 895  VRFSSYPDSQFVLFGVANELHLNP-RHVTCGYIYTYKVNPTCTSLELVHKTTVDNVPTAI 953

Query: 950  CQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFC 1009
            C FQGR++ GIG +LRLYD+GKK+LLRKCENK  P  I+ I     RIYV D+QES +  
Sbjct: 954  CGFQGRVIIGIGRILRLYDIGKKKLLRKCENKQIPLLIMGIRVMGCRIYVSDVQESVYMV 1013

Query: 1010 KYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTG 1069
            +Y+R+ENQL IFADD+ PR++TA   +D++T+A ADK GNI  VRL   +SDE+++DPTG
Sbjct: 1014 RYKRNENQLIIFADDTQPRYITAMEILDYNTVATADKCGNISVVRLASSISDEVDDDPTG 1073

Query: 1070 GKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAF 1129
             K  W++G LNGA  K + IV FH+G++ TS+QKA+L+PGG ES++Y TV G++G ++ F
Sbjct: 1074 NKSLWDRGLLNGASQKADFIVNFHIGEICTSIQKATLIPGGSESLVYATVTGTIGVLVPF 1133

Query: 1130 SSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRK 1189
            ++ ++ DFF HLEMHMR E+PPLCGRDH++YRS YFPVK+V DGDLCEQ+ ++ +  Q+ 
Sbjct: 1134 TAHEEQDFFQHLEMHMRSENPPLCGRDHLSYRSYYFPVKNVCDGDLCEQYNSIDIAKQKS 1193

Query: 1190 IADELDRTPGEILKKLEEIRNK 1211
            IA +LD+TP E+ K+LE+IR +
Sbjct: 1194 IAADLDKTPAEVSKRLEDIRTR 1215


>gi|307166104|gb|EFN60356.1| Splicing factor 3B subunit 3 [Camponotus floridanus]
          Length = 1201

 Score = 1376 bits (3562), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/1219 (54%), Positives = 893/1219 (73%), Gaps = 29/1219 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ+ TGI  A++GNFSG+K  EI+V+RGK LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG+ KDYIVVGSDSGRIVILEY P+KN+FDK+HQETFGKSGCRRIVPGQY
Sbjct: 61   IIRSLMAFRLTGATKDYIVVGSDSGRIVILEYIPAKNMFDKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+DPKGRAVMI                 ARLTISSPLEAHKS+T+VY   G+D GFDNP
Sbjct: 121  LAIDPKGRAVMI----------------EARLTISSPLEAHKSNTLVYHTVGVDVGFDNP 164

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG AA + Q+ LT YELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 165  MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG 224

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 225  GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 283

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDT+PV ASMCVLK+G+LF ASEFGNH LY
Sbjct: 284  FFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLY 343

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FF PR L+NLV +++++SL PIM  ++A+L  
Sbjct: 344  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLAN 401

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK+ +++E+DAYI+VS
Sbjct: 402  EDTPQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVS 461

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 462  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWK 521

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TIVK   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ +M  +V C+ + +V  
Sbjct: 522  APGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAV 581

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA--SVGGEDGA 652
            G +RS FLAVG  DNT+RI+SLDP DC+   S+Q++ +  ESL  +E+ A  +   ED A
Sbjct: 582  GEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKEADNSEDSA 641

Query: 653  DHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSS 712
               +SL+LN GLQNGVL RTV+D ++G L+D+R+R+LG RP KLF + + G  A+L +SS
Sbjct: 642  PQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSS 701

Query: 713  RPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNET 772
            R WL Y H+ RF LTPLSYE+LE+A+ FSS+QC EG+V+++ N LR+  +E+LG  FN+ 
Sbjct: 702  RSWLSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQV 761

Query: 773  ALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQME 832
            + PL YTPR+F +      +VIIET+  A T E ++  + +  E               E
Sbjct: 762  SFPLEYTPRKFAIHTDSAHLVIIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARE 821

Query: 833  NGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
              +     +P ++  +G P+A    W S +R++ P +  T  +   + N AA  +C V F
Sbjct: 822  LAEAFLSEEP-NEAVFGAPRAGPGLWASMLRIMAPTTGQTFEVHRFEQNLAALCLCLVKF 880

Query: 893  HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF 952
             ++     L VG AK  Q  P+ +   G+++ Y+   E  S+ELLHK+ ++ +PLA+C +
Sbjct: 881  ANQGDQLFLIVGVAKEFQLNPRVS-NGGFLYTYKVNTECTSIELLHKSPLDEVPLAICPY 939

Query: 953  QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            QGR+L G+G +LRLYD+GKK+LLRKCENK  PN +VSIN    RIYV D+QES +  +Y+
Sbjct: 940  QGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYK 999

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
            R ENQL +FADD+ PR++T    +D+DT+A ADK+GNI  +RL   ++D+++EDPTG K 
Sbjct: 1000 RQENQLIVFADDTHPRFITTTCVLDYDTVATADKYGNIAVIRLATGINDDVDEDPTGNKA 1059

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSR 1132
             W++G LNGA  K + +  FHVG+ V SLQKA+L+PGG ES++Y T+ G++G ++ F+S 
Sbjct: 1060 LWDRGLLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSH 1119

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIAD 1192
            +D DFF HLEMHMR EHPPLCGRDH+++RS Y+PVK+VIDGDLCEQF ++    Q+ I+ 
Sbjct: 1120 EDHDFFQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPVKQKSISG 1179

Query: 1193 ELDRTPGEILKKLEEIRNK 1211
            +L+RTP E+ KKLE+IR +
Sbjct: 1180 DLERTPSEVSKKLEDIRTR 1198


>gi|195996829|ref|XP_002108283.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
 gi|190589059|gb|EDV29081.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
          Length = 1208

 Score = 1369 bits (3544), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 678/1221 (55%), Positives = 888/1221 (72%), Gaps = 26/1221 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLYSLTLQ+ + I  A++GNFSGTK  EI+ A+GKVLELLRP+ NSG++ ++ + E+FG
Sbjct: 1    MYLYSLTLQKSSCITCAVHGNFSGTKQQEIIAAKGKVLELLRPDANSGKVHSITTLEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR LA FRLTG  KDY+V+GSDSGRI ILEY PSKN F+KIHQETFGKSGCRRIVPGQY
Sbjct: 61   EIRCLAPFRLTGGSKDYVVIGSDSGRITILEYIPSKNTFEKIHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMIGA EKQKLVY+LNRDT+ARLTISSPLEAHKSHT+V+S+ GID GF+NP
Sbjct: 121  LAVDPKGRAVMIGAMEKQKLVYILNRDTSARLTISSPLEAHKSHTVVFSVVGIDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA   ++ LT+YELDLGLNHV RK++E + + +NML+ VPG
Sbjct: 181  VFACLEVDYEEADNDPTGEAALTTRQMLTYYELDLGLNHVVRKFTETLQDFSNMLIPVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA-DLP-AERGVLIVSAATHRQKTLFF 296
            G DGPSG+LVC+ENF+ YKN G  PD+R  IPRR  DL   +RG+L V  A H+ K+LFF
Sbjct: 241  GNDGPSGILVCSENFITYKNFGDQPDIRMPIPRRRYDLSDPDRGILFVCYAGHKTKSLFF 300

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            F +Q E GDIFK+TL  +++ VS +K+KYFDTIPV +SM VLK+G+LFA+SEFGNH LYQ
Sbjct: 301  FFIQNEQGDIFKLTLTVEDDMVSSIKLKYFDTIPVASSMIVLKTGFLFASSEFGNHHLYQ 360

Query: 357  FQAIG-ADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
               +G  D + E SS+ L++  E F   ++  R LKNLV +++V+SL PI   ++A+L  
Sbjct: 361  IAHLGDNDEETEFSSTMLLDEGETF---YYSLRPLKNLVEVDEVDSLCPITGCQVADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGP S+LRILR GL V+EMAVS+LPG P+ VWTVK + + E+DAYIVVS
Sbjct: 418  EDTPQLYVSCGRGPNSTLRILRHGLEVTEMAVSELPGNPNGVWTVKTSASAEYDAYIVVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGE+VEEVSDSGFL TTP+L    IGDD+L+QV+ +GIRH+R D R+NEW+
Sbjct: 478  FVNATLVLSIGESVEEVSDSGFLGTTPTLHCCQIGDDALLQVYANGIRHVRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+ I K   N  QV IAL+GGEL+YFE+D++GQL E  E+ E S +V C+ I SVP 
Sbjct: 538  APGKKIISKCAVNNRQVAIALTGGELVYFEMDLSGQLNEYTERREFSSEVICMSIGSVPV 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G KR RFLAVG  D+T+R++SLDP DC+Q +S+Q++ + PESL  + + +    E     
Sbjct: 598  GEKRCRFLAVGLADHTVRMISLDPSDCLQPMSMQALPTVPESLCIVAMGSGDSSESEQGV 657

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
             ++ +LN GLQNGVL R+V+D VTG +SD+R+R+LG RP +LF V +    A+L +SSR 
Sbjct: 658  LSTYYLNIGLQNGVLLRSVLDSVTGDMSDTRTRYLGSRPVRLFKVKIQNSEAVLAISSRS 717

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            WLGY+ +    LTPLSY+ L+YA+ FSSDQC EGVVS+AG+ LR+  +E+LG  FN+  +
Sbjct: 718  WLGYMFQSVSRLTPLSYDALDYASGFSSDQCPEGVVSIAGDTLRILALEKLGAVFNQMTI 777

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENGNGNMDQ 830
             L+ TPRRF +  +   +V++ +D    T    +E ++   KE  E+AG  E      + 
Sbjct: 778  NLKLTPRRFAIDQQNSNLVVVGSDHLCFTDSTKSERKQQMAKEIIESAG-DEEAELAKEV 836

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTV 890
             E+  +E     L   ++G PKA + +W SCI++L P  +     LEL  +EAA S+   
Sbjct: 837  AESFMNE----VLPATEFGEPKAGNGQWASCIQLLAPDQS-----LELDQDEAALSVAIC 887

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
             F  K   T + VG AK L   P  +   G ++ YR       LEL+HKT VE +P A+ 
Sbjct: 888  RFAYKPDETFVVVGVAKELNLNPSSS-SGGLMNTYRMA--NGQLELVHKTVVEEVPRAMA 944

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
             FQGRLL G G +LR+YDLG+K+LLRKCENK FP  IV+I++   R+ VGD+QES HF K
Sbjct: 945  AFQGRLLVGTGRILRVYDLGRKKLLRKCENKNFPYRIVTISSMGSRVIVGDVQESVHFVK 1004

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            YR  EN+L +FADD  PR++TA   +D+DT+A  DKFG+I  +RL  D++DEIEEDPTG 
Sbjct: 1005 YRAKENRLVVFADDVSPRYVTATCFLDYDTIAVGDKFGSIAILRLSDDINDEIEEDPTGA 1064

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFS 1130
            K  W++G LNGA  K      F++G+ V SLQK +++PGG ES+IY T+ GS+G +L F+
Sbjct: 1065 KAFWDRGLLNGASQKANLEASFYIGETVMSLQKTTIIPGGSESLIYTTLSGSIGVLLPFT 1124

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
            SR++VDFF HLEMH+R E+ P+CGRDH+AYRS YFP K+VIDGD+CEQF  L    +R +
Sbjct: 1125 SREEVDFFQHLEMHLRSENAPICGRDHLAYRSYYFPAKNVIDGDMCEQFNALDGSKRRTL 1184

Query: 1191 ADELDRTPGEILKKLEEIRNK 1211
            A ELDRTP EI KKLE++R +
Sbjct: 1185 AMELDRTPPEISKKLEDMRTR 1205


>gi|156406895|ref|XP_001641280.1| predicted protein [Nematostella vectensis]
 gi|156228418|gb|EDO49217.1| predicted protein [Nematostella vectensis]
          Length = 1171

 Score = 1362 bits (3524), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 678/1221 (55%), Positives = 870/1221 (71%), Gaps = 63/1221 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ + I   I+GNFSGTK  EIVV+RGK +ELLR + N+G++  +++ E+FG
Sbjct: 1    MHLYALTLQRASAINNTIHGNFSGTKQQEIVVSRGKFVELLRTDPNTGKVFPVLAIEMFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R L  FRLTG  KD+IVVGSDSGRIVILEY PSKNVF+K+HQETFGKSGCRRIVPGQY
Sbjct: 61   IVRDLIAFRLTGGSKDFIVVGSDSGRIVILEYIPSKNVFEKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA+MIGA EKQKLVY++NRD+AARLTISSPLEAHKSHT+VY + G+D GF+NP
Sbjct: 121  LAADPKGRAIMIGAIEKQKLVYIMNRDSAARLTISSPLEAHKSHTLVYHMVGVDAGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA   Q+ LTFYELDLGLNHV RK+SEP++   N+L+ VPG
Sbjct: 181  MFACLEMDYEEADTDHTGEAAQTTQQTLTFYELDLGLNHVVRKYSEPLEEHGNLLIAVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVLVC+EN++ YKN G  PD+R  IPRR    D P ERG+L + +ATH+ K++F
Sbjct: 241  GSDGPSGVLVCSENYLTYKNFGDQPDIRMPIPRRKYDLDDP-ERGMLFICSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QTE GDIFK+TLE D + V+E+++KYFDT+P   SMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLVQTEQGDIFKITLETDEDMVTEIRMKYFDTVPPAVSMCVLKTGFLFTASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ ME EEG    FFQPRGLKNLV ++++ESL PIM+ +IA+L  
Sbjct: 360  QIAHLGDDDD-ELEFSSTMELEEG-TTFFFQPRGLKNLVLVDELESLAPIMNCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ+F  CGRG RSSLR+LR GL VSEMAVS+LPG P+AVWTVK    DEFDAYIVVS
Sbjct: 418  EDTPQLFAACGRGSRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKHTTADEFDAYIVVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ S +G+++L+Q++P GIRHIR D R+NEW+
Sbjct: 478  FINATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGEEALVQIYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGK+TIVK   N  QVVIAL+GGE++YFE+D +GQL E  E+ EMS DV C+ + ++  
Sbjct: 538  APGKKTIVKSAVNERQVVIALTGGEVVYFEMDSSGQLNEYTERKEMSADVQCMALGTILH 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G  RSRFLA+G  DNT+RI+SLDP DC+  LS+Q++ + PESL  +E+    G E     
Sbjct: 598  GELRSRFLAIGLSDNTVRIISLDPQDCLTPLSMQALPAMPESLCIVEMGGKEGAESEGGS 657

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
               LFLN GL                        L L P             +L +SSR 
Sbjct: 658  MGGLFLNIGLSEIC--------------------LTLEP-----------GEVLAMSSRS 686

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            WL Y H+ R  LTPLSYETLEYA+ FSS+QC EG+V++AGN LR+  +E+LG  FN+ A 
Sbjct: 687  WLSYTHQSRVHLTPLSYETLEYASGFSSEQCPEGIVAIAGNTLRILALEKLGAVFNQVAT 746

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQM-EN 833
            PL+YTPR+FV+      +V+IETD    T   RE  K++  E   M E  +    ++   
Sbjct: 747  PLKYTPRKFVIHSPTNTLVVIETDHNTYTDAAREERKQQMAEE--MVEMASEEEKELAAQ 804

Query: 834  GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFH 893
               E   + LS++Q+G PKA +  W S IRVLDP    T  +++L  NEAAFS+C  +F 
Sbjct: 805  AAAEFLSEELSEQQFGSPKAGTGMWASVIRVLDPIKGETHDVVQLDQNEAAFSVCVCSFS 864

Query: 894  DKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEE---GKSLELLHKTQVEGIPLALC 950
             +   T + VGTAK +   P R+   GY++ YR V++   G  LE  HKT+V+ +P AL 
Sbjct: 865  ARPDDTFVIVGTAKDMALSP-RSCSTGYLYAYRLVQQPSGGIKLEFQHKTEVDDVPAALE 923

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
             FQGRLLAGIG +LR+YD+GKK++LRKCENK  PN I +IN+   RI V DIQESFHF K
Sbjct: 924  PFQGRLLAGIGRLLRVYDIGKKKMLRKCENKKLPNFICNINSMGTRIVVSDIQESFHFVK 983

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            Y+  +NQL +FADD  PRWLT   ++D+DT+AGADKFGNI+ VRLP   SD+++EDPTG 
Sbjct: 984  YKPRDNQLVVFADDVNPRWLTCCCYLDYDTLAGADKFGNIFTVRLPSGSSDDVDEDPTGT 1043

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFS 1130
            K  W++G LNGA  K+E +  + VG+ V SLQKA+L+PGG ES+++ T+ G +G ++ F+
Sbjct: 1044 KAFWDRGLLNGAQQKLETMCNYFVGETVLSLQKATLIPGGSESLVFTTLSGGVGMLVPFT 1103

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
            SR+D+DFF HLEMH+R E P L                 V+DGDLCE + +L    +R I
Sbjct: 1104 SREDIDFFQHLEMHLRSEQPSL----------------SVVDGDLCEHYNSLDYSKRRTI 1147

Query: 1191 ADELDRTPGEILKKLEEIRNK 1211
            A+ELDRTP E+ KKLE+IR +
Sbjct: 1148 AEELDRTPAEVSKKLEDIRTR 1168


>gi|449664009|ref|XP_004205855.1| PREDICTED: splicing factor 3B subunit 3-like [Hydra magnipapillata]
          Length = 1213

 Score = 1347 bits (3487), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/1233 (54%), Positives = 886/1233 (71%), Gaps = 45/1233 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY LTLQ+ + I  A++GNFSGTK  EI V+RGKVLELLRP+ N+G++  L +TE+FG
Sbjct: 1    MHLYQLTLQRSSAIYNAVHGNFSGTKLQEIAVSRGKVLELLRPDPNTGKVHPLFATEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKS---GCRRIVP 116
             IR L  FRLTG  K   +   D+             V + ++   F  +   GCRRIVP
Sbjct: 61   VIRDLMAFRLTGGTKVNKLFDKDT-------------VANHLYLNKFIANRDFGCRRIVP 107

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            GQYLA DPKGRA+MIGA EKQK VY+LNRD  ARLTISSPLEAHKSH +V+ I GID GF
Sbjct: 108  GQYLAADPKGRAIMIGAIEKQKFVYILNRDAQARLTISSPLEAHKSHNVVFHIVGIDVGF 167

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVT 236
            +NP+FA +ELDY EAD D TG+AA  AQ+ LTFYELDLGLNHV RK+SEP++  ANML++
Sbjct: 168  ENPMFACLELDYEEADVDHTGEAAQAAQQTLTFYELDLGLNHVVRKYSEPLEEFANMLIS 227

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA-DLP-AERGVLIVSAATHRQKT 293
            VPGG DGPSGV+VC+EN++ YKN G   D+R  IPRR  DL   ER ++ V  AT++ K+
Sbjct: 228  VPGGNDGPSGVIVCSENYLTYKNFGDQRDIRCPIPRRKNDLDDNERSMIFVCTATYKTKS 287

Query: 294  LFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
            +FFFL+Q+E GDIFKVTLE + + V+E+++KYFDTIPV +++CVLK+G+LFAASEFGNHA
Sbjct: 288  MFFFLVQSEQGDIFKVTLETEEDMVTEIRVKYFDTIPVASALCVLKTGFLFAASEFGNHA 347

Query: 354  LYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
            LYQ   +G D D E   S+LM TE  EG +  FF  R L+NLV ++++ESL PIM  ++A
Sbjct: 348  LYQITHLG-DDDEEPEFSSLMATELDEG-ETFFFHARDLQNLVLVDEMESLAPIMHCQVA 405

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            +L  E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P++VWTVKKN  DE DAY
Sbjct: 406  DLANEDTPQLYAACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNSVWTVKKNSTDEQDAY 465

Query: 472  IVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI 531
            IVVSF NATLVLSIGETVEEV+DSGFL TTP+L+ SL+G+D+L+Q++P GIRHIR D R+
Sbjct: 466  IVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALLQIYPDGIRHIRSDRRV 525

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIA 590
            NEW+TPGK+ I++   N  Q+VIAL+G EL+YFE+D +GQL E  E+ EMS DV C+ + 
Sbjct: 526  NEWKTPGKKNIIQCAVNERQIVIALTGNELVYFELDQSGQLNEYTERKEMSADVVCMALG 585

Query: 591  SVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGED 650
             V  G +RSRFLAVG  DNT+RI+SLDP+DC++ LS+Q++ +  ESL  +E+  +  GE 
Sbjct: 586  PVHAGEQRSRFLAVGLIDNTVRIISLDPNDCLEPLSMQALPAAGESLCIIEMGGTEVGEK 645

Query: 651  G-ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
            G A +   LFLN GL NGVL RTV+D VTG LSD+R R+LG +P KLF+V   G +++L 
Sbjct: 646  GTAGNAGGLFLNIGLANGVLLRTVLDSVTGDLSDTRIRYLGSKPVKLFNVKTYGCSSVLA 705

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
            +SSR WL Y ++ RF LTPLSYE+LEYA+SF+S+QC EG+V+++ N LR+  +E+LG  F
Sbjct: 706  MSSRTWLSYTYQSRFHLTPLSYESLEYASSFASEQCPEGIVAISSNTLRILALEKLGAVF 765

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTA----EEREAAKKECFEAAGMGENGN 825
            N+   PL +TPR+FV+  K   +++IETD  A+T     + ++   +E  E+ G  +   
Sbjct: 766  NQVTTPLDFTPRKFVVDHKSHTLIMIETDHNAMTKTFKLDRKQRIAEEMVESCGDNDEAR 825

Query: 826  GNMDQME----NGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
                Q+     N D       + + Q+G PKA   +W S +R++DP  + T   ++L+ +
Sbjct: 826  AAESQVAANFLNTD-------IPEIQFGAPKAGIGRWASIVRIMDPIRSETHHEIQLEQD 878

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK---SLELLH 938
            EAAFS+C   F ++     + VG A  +   P  +     IH Y+  +  +    LELLH
Sbjct: 879  EAAFSVCLTEFANQPGDRFVIVGCATKMILNPHSSQSCS-IHTYQLYQNDRGRMQLELLH 937

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            KT V+ IP ALC FQGRLL G+G +LR+YDLGKK+LLRKCENK     I  I+T   RI 
Sbjct: 938  KTPVDDIPGALCSFQGRLLVGVGRILRIYDLGKKKLLRKCENKKVSTFITGIDTIGYRIM 997

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            V DIQ+SFHF KY+R +NQL +FADD   R+LT    +D+DTMAGADKFGNI+FVRLP D
Sbjct: 998  VHDIQDSFHFLKYKRKDNQLVLFADDVNKRFLTCGCLVDYDTMAGADKFGNIFFVRLPAD 1057

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            V D+IEEDPTG K  W++G LNGA  K + +  +H+G+   SLQKA+L+PGG ES++Y T
Sbjct: 1058 VKDDIEEDPTGVKALWDRGLLNGASQKADVVSVYHIGETALSLQKATLIPGGSESLVYTT 1117

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            V G +G ++ F+SR+D+DFF HLEMHMRQ+ PPLCGRDH+ +RS++  VK+ +DGDLCEQ
Sbjct: 1118 VSGGIGMLVPFTSREDIDFFQHLEMHMRQDSPPLCGRDHLWFRSSFSSVKNCVDGDLCEQ 1177

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            F +L    ++ IA+ELDRTP E+ KKLE+IR +
Sbjct: 1178 FNSLEYAKRKAIAEELDRTPAEVSKKLEDIRTR 1210


>gi|324501533|gb|ADY40680.1| Splicing factor 3B subunit 3 [Ascaris suum]
          Length = 1214

 Score = 1328 bits (3437), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/1221 (52%), Positives = 872/1221 (71%), Gaps = 20/1221 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGT-KTPEIVVARGKVLELLRPE-NSGRIETLVSTEIF 58
            M+LY+LTLQ  + I  AI+G+F G  K  E+ VARG +L+LL  +  +G++  + S  +F
Sbjct: 1    MHLYNLTLQGSSAINQAIHGSFCGLPKQQEVCVARGNLLQLLFCDPKTGKVHVMCSHNVF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G IRSL  FRLTG  KDYIVVGSD+GRIVILEYNP K  F+++HQETFGK+GCRRIVPGQ
Sbjct: 61   GIIRSLLAFRLTGGSKDYIVVGSDAGRIVILEYNPQKVCFERVHQETFGKTGCRRIVPGQ 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            +LAVDPKGRA++IGA E+QKLVYV+NRD AA LTISSPLEAHKSH I YSI G+D GF+N
Sbjct: 121  HLAVDPKGRAILIGAVERQKLVYVMNRDAAANLTISSPLEAHKSHCICYSIVGVDVGFEN 180

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P FA +E+DY E D D +G  A++  + LTFYELDLGLNHV RK++EP+ +  N+L++VP
Sbjct: 181  PTFACLEVDYEEVDHDPSGHLANKIPQTLTFYELDLGLNHVVRKYAEPLVDKGNILISVP 240

Query: 239  GGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLF 295
            GG +GPSGV+VC EN++++KN G  PD+R  IPRR +     +R V+IV  ATH+ K ++
Sbjct: 241  GGQEGPSGVIVCCENYLVFKNLGDQPDIRCPIPRRRNELDDCDRTVMIVCTATHKTKLMY 300

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QT+ GDIFKVTLE +++ V+ELKIKYFDTIP+  +MC+LK+G+LF ASEFG+H LY
Sbjct: 301  FFLVQTDQGDIFKVTLESEHDIVTELKIKYFDTIPLANAMCILKTGFLFTASEFGDHHLY 360

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M+ +EG +  FF PRGL NL  ++Q++SL P++   I +L  
Sbjct: 361  QIAHLG-DEDDEPEYSSRMQLDEG-ETFFFAPRGLLNLAVVDQIDSLCPLISCHIDDLAN 418

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+APQ++ LCGR  RS+L++LR GL V+EMAVS+LPG P+AVWTVK+N++D++D++IVVS
Sbjct: 419  EDAPQLYALCGRSARSALKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKYDSHIVVS 478

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L   LIGDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 479  FVNATLVLSIGETVEEVTDSGFLGTTPTLGCGLIGDDALLQVYPDGIRHIRADRRVNEWK 538

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGKRTI+K   NR QV IAL+GGE++YFE+D+TGQL E  E+ E+  DV C+ ++ +PE
Sbjct: 539  APGKRTIIKCALNRRQVAIALAGGEIVYFELDVTGQLNEYTERRELPADVLCMSLSEIPE 598

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G  RSRFL VG  D T+RI+SLDP DC+  LS+Q++ S PES++ LE+    GGE     
Sbjct: 599  GELRSRFLTVGLADKTVRIISLDPQDCLAPLSMQALPSEPESIIVLEM---FGGE--GQS 653

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
             +++ LN GLQNG L RT VD VTG+L+D+R+R+LG R   LF V +  + A++  SSR 
Sbjct: 654  ASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTRSVNLFRVRIQSKDAIMAASSRA 713

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            WL Y ++ RF LTPLSY  LEYAA FSS+QC EG+V++A N LR+ ++E+LG  FN+   
Sbjct: 714  WLLYNYQSRFHLTPLSYTALEYAAGFSSEQCPEGIVAIAENTLRILSLEKLGAVFNQAVY 773

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALTA----EEREAAKKECFEAAGMGENGNGNMDQ 830
            PL YTPRR ++      +++IETD  A TA    E R+    E  E A   E    +   
Sbjct: 774  PLDYTPRRMIIHKASGNLIVIETDHAAFTAKGKQERRKQLANELMEVAK--EADEADEQA 831

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTV 890
            ++   +    + +++ + G PK +  KW S +R++      T  L    ++EAAFS+  V
Sbjct: 832  VKEMAEAILTEKVNEREMGAPKNQKGKWASTVRIMRSSDGETLSLFPFAEDEAAFSLAMV 891

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
             F ++     + VG   GLQ  P+++   G I+ +     G  LE LH+T  + +  A+ 
Sbjct: 892  QFQNQNDAQFILVGCGLGLQLKPRKS-HGGSIYTFLLANNGSKLEFLHRTPTDEVVNAVH 950

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
             F+G  L G+G  +RLYDLGKK+LL KCENK  P  +V I +   RI V D QES HF +
Sbjct: 951  DFRGMALVGVGKKIRLYDLGKKKLLAKCENKQLPVQVVDIRSMGQRIVVSDSQESLHFMR 1010

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            Y++ +NQL IF DD+ PR++T    +D+DT+A  D+FG+I  +RLP+ V++E++EDPTG 
Sbjct: 1011 YKKQDNQLSIFCDDTSPRFVTCICILDYDTVAVGDRFGSIAVLRLPKGVTEEVQEDPTGV 1070

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFS 1130
            +  W++G LNGA  K+E I QF+VGD VTS+QK SLVPG  + ++Y T+ G++G ++ F 
Sbjct: 1071 RALWDRGNLNGASQKVEHIGQFYVGDTVTSMQKTSLVPGANDCLVYTTISGTIGMLVPFV 1130

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
            SRD+ DFF +LEMH+R E PPLCGRDH+A+RS YFPVK +IDGDLCEQ+  + LD Q+ +
Sbjct: 1131 SRDEFDFFQNLEMHLRVEFPPLCGRDHLAFRSFYFPVKCIIDGDLCEQYALMPLDKQKAV 1190

Query: 1191 ADELDRTPGEILKKLEEIRNK 1211
            A+EL R P EI KKLE+IR +
Sbjct: 1191 AEELGRKPAEIHKKLEDIRTR 1211


>gi|355718834|gb|AES06402.1| splicing factor 3b, subunit 3, 130kDa [Mustela putorius furo]
          Length = 1101

 Score = 1311 bits (3392), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1113 (58%), Positives = 831/1113 (74%), Gaps = 35/1113 (3%)

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+L
Sbjct: 2    IRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFL 61

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP+
Sbjct: 62   AVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPM 121

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPGG
Sbjct: 122  FACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGG 181

Query: 241  GDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQK---- 292
             DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K    
Sbjct: 182  SDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMFL 240

Query: 293  TLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            ++FFFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH
Sbjct: 241  SMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNH 300

Query: 353  ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
             LYQ   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+
Sbjct: 301  YLYQIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIAD 358

Query: 413  LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            L  E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI
Sbjct: 359  LANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYI 418

Query: 473  VVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN 532
            +VSF NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+N
Sbjct: 419  IVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVN 478

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIAS 591
            EW+TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+
Sbjct: 479  EWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLAN 538

Query: 592  VPEGRKRSRF---LAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGG 648
            VP G +RSRF   LAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E    +GG
Sbjct: 539  VPPGEQRSRFLAVLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVE----MGG 594

Query: 649  EDGADHPAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
             +  D          L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + 
Sbjct: 595  TEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQ 654

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            G+ A+L +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +
Sbjct: 655  GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILAL 714

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAA 818
            E+LG  FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAA
Sbjct: 715  EKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAA 774

Query: 819  GMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLEL 878
            G  E      +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L
Sbjct: 775  GEDERELA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQL 829

Query: 879  QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
            + NEAAFS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LH
Sbjct: 830  EQNEAAFSVAVCRFSNTGDDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLH 888

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            KT VE +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ 
Sbjct: 889  KTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVI 948

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            V D+QESF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP +
Sbjct: 949  VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1008

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
             +DE++EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T
Sbjct: 1009 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTT 1068

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPP 1151
            + G +G ++ F+S +D DFF H+EMH+R EHPP
Sbjct: 1069 LSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPP 1101


>gi|340367935|ref|XP_003382508.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Amphimedon
            queenslandica]
          Length = 1160

 Score = 1309 bits (3388), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/1217 (53%), Positives = 862/1217 (70%), Gaps = 66/1217 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+P+ I AA++GNFSG K  E+VVARGKVLELLRP+ N+G++  LVSTE+FG
Sbjct: 1    MHLYALTLQKPSCITAAVHGNFSGRKAQEVVVARGKVLELLRPDPNTGKVVELVSTEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTGS KDYIV+GSDSGRIVILEY+P KNVF+K+HQET+GKSGCRRIVPGQY
Sbjct: 61   LIRSLITFRLTGSTKDYIVLGSDSGRIVILEYDPVKNVFEKVHQETYGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA+MIGA EKQKLVY+LNRD+AARLTISSPLEAHKSHT+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRALMIGAVEKQKLVYILNRDSAARLTISSPLEAHKSHTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +ELDY E+D D TG+AA  AQ+NLT+YELDLGLNHV RK+SEP+D+ ANML+TVPG
Sbjct: 181  LFACLELDYEESDNDHTGEAAQVAQQNLTYYELDLGLNHVVRKYSEPLDDMANMLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA-DLP-AERGVLIVSAATHRQKTLFF 296
            G DGPSGVLVC EN++IYKN G  PD+R  IPRR  DL  A+R +LI+++A H+ K LFF
Sbjct: 241  GTDGPSGVLVCCENYIIYKNFGDQPDIRCPIPRRQNDLDDADRSMLIITSAMHKTKHLFF 300

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            FLLQ+E GDIFKV L+ +++ V  +KIKYFDT+PV +S+CVLKSG LF +SEFGNH LYQ
Sbjct: 301  FLLQSEQGDIFKVMLDVEDDIVVRIKIKYFDTVPVCSSLCVLKSGLLFCSSEFGNHYLYQ 360

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               +G D + E  S   +E  E F   FF PR LKNL+ ++++ESL PIM  +IA+L  E
Sbjct: 361  IAHLGDDSEREFHSDYPLEEGETF---FFGPRPLKNLILVDEMESLSPIMSCQIADLANE 417

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
            + PQ++  CGRGPRSSLR+LR GL V+EMAVS+LPG P AVWTVKK+  ++FD+YIVVSF
Sbjct: 418  DTPQLYAACGRGPRSSLRVLRHGLEVTEMAVSELPGNPHAVWTVKKDSKEDFDSYIVVSF 477

Query: 477  NNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRT 536
             NATL+LSIGETVEEV+DSGFL TTP+LA S +GDD+L+Q++P GIRHIR D R+NEWR+
Sbjct: 478  MNATLILSIGETVEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHIRSDKRVNEWRS 537

Query: 537  PGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPEG 595
            PGKR I +   N  QVVIALSGGE++YFE+D +GQL E  E+ EM+ +V C+ + SVP G
Sbjct: 538  PGKRLIRQCAVNEHQVVIALSGGEIVYFEMDQSGQLNEYTERKEMTAEVICISLGSVPPG 597

Query: 596  RKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHP 655
            ++R RFLAVG  D T+RI+SLDP D +Q LS+Q++ + PESL  + +  +V  +D     
Sbjct: 598  QQRCRFLAVGLSDQTVRIISLDPHDTLQPLSMQALPALPESLCIVNMSGNVS-DDTTVST 656

Query: 656  ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPW 715
              LFLN GLQNG                                       ++ +SSR W
Sbjct: 657  GGLFLNIGLQNG--------------------------------------GVIAVSSRTW 678

Query: 716  LGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
            L Y ++ RF LTPLSY+ LEYA+SF+S+QC EG+V+++ N LR+  +E+LG  FN+ + P
Sbjct: 679  LNYTYQSRFHLTPLSYDLLEYASSFTSEQCPEGMVAISSNTLRILALEKLGVVFNQVSTP 738

Query: 776  LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGD 835
            L+YTPR+ ++ P    +V+IETD  A T   +   KK+  E   +    +    +     
Sbjct: 739  LQYTPRKLLIHPPMSNLVLIETDHNAFTEATKLHRKKQMAEEM-VSSAADDEKAEAAKAA 797

Query: 836  DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDK 895
            +    + L +  +G PKA    W SC+RV+ P    T  +++ + NEAAFS+    F  K
Sbjct: 798  EAFLAEDLPEHMFGSPKAGRGMWASCLRVMHPNQGKTLDIVQFEQNEAAFSLAVCQFVSK 857

Query: 896  -EHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQG 954
             +    + VGTAK +   P R I +G + ++R   +G  LE +H TQ++ +P+A+  FQG
Sbjct: 858  GDLEWFVVVGTAKDMIITP-RAISSGSLIVFRLSPDGSKLEHVHTTQLDDVPIAMAPFQG 916

Query: 955  RLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRD 1014
            RLL G+G +LR+YD+GKK++LRKCENK  P  +V I     R+YVGD+QE+ HF  YR  
Sbjct: 917  RLLVGVGKLLRIYDIGKKKMLRKCENKHLPYLVVDIKVMGRRVYVGDVQEAVHFLYYRPH 976

Query: 1015 ENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKW 1074
            ENQL IFAD+ VPR+ T +  +D++T+A ADKFGNI  +RLP DV+D+++EDP+G +  W
Sbjct: 977  ENQLVIFADEVVPRFCTTSCILDYNTVASADKFGNITILRLPSDVTDQVDEDPSGSRSLW 1036

Query: 1075 EQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDD 1134
            ++G LNGA  K   +  +HVG+ + +L K SL+PGG E ++Y T+ GS+G ++ FSS++D
Sbjct: 1037 DRGFLNGATQKANVMTSYHVGEGINTLHKVSLIPGGSEVLVYTTLSGSIGILVPFSSKED 1096

Query: 1135 VDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADEL 1194
             DFF HLEMHMR E   L                 VIDGDLCE + +L    +R+IA +L
Sbjct: 1097 SDFFQHLEMHMRSEWSNL----------------SVIDGDLCEVYNSLDPSKRREIALDL 1140

Query: 1195 DRTPGEILKKLEEIRNK 1211
            DR+P E+ KKLE++R +
Sbjct: 1141 DRSPSEVAKKLEDLRTR 1157


>gi|384490247|gb|EIE81469.1| hypothetical protein RO3G_06174 [Rhizopus delemar RA 99-880]
          Length = 1197

 Score = 1308 bits (3386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1226 (52%), Positives = 868/1226 (70%), Gaps = 51/1226 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPEN-SGRIETLVSTEIFG 59
            M+LY+LT+   T I  AI+GNFSGTK  EI+VAR   LELL+P+  SG+I T++S E FG
Sbjct: 1    MFLYNLTISPTTAINQAIHGNFSGTKQQEIIVARQTRLELLKPDAASGKIHTILSHECFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+A FRLTG  KD+IVVGSDSGRIVILEYNP KN+F+K+HQET+GK+GCRRIVPGQY
Sbjct: 61   LIRSIAPFRLTGGSKDFIVVGSDSGRIVILEYNPVKNIFEKVHQETYGKTGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            L  DPKGRAVMI A EKQKLVY+LNRD+AA LTISSPLEAH+SH I++ I  +D GF+NP
Sbjct: 121  LTADPKGRAVMISATEKQKLVYILNRDSAANLTISSPLEAHRSHAIIHHIVAVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FA +E+DY++AD DSTG+AA  A+K LT+YELDLGLNHV RKWS+ VD  AN+LV VPG
Sbjct: 181  TFACLEVDYADADTDSTGEAAQNAEKILTYYELDLGLNHVVRKWSDVVDRKANLLVPVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE---RGVLIVSAATHRQKTLFF 296
            G DGPSGVLVC ENF+ YK+    ++R  IPRRA  P E   RG++I+++A         
Sbjct: 241  GNDGPSGVLVCTENFIAYKHPDAEELRIPIPRRAQ-PLEDPKRGIIIIASA--------- 290

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
                +E GD++KVT++H    V  L IKYFDTIP   S+ +LKSG+LFAASEFGNH  Y 
Sbjct: 291  ----SEEGDLYKVTMDHVQGTVQGLTIKYFDTIPPAISLSILKSGFLFAASEFGNHRHYF 346

Query: 357  FQAIG-ADPDVEASSSTLMETE--EGFQP-VFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
            F+ +G  D D E SS+  ME E  EG  P V+F+PR LKNL  ++++ES+ P+M+ ++ N
Sbjct: 347  FEGLGDDDDDAEISSAVYMEQETYEGGIPLVYFKPRPLKNLSLVDELESMAPLMESKVLN 406

Query: 413  LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            L +EE P+I+ +CGRG +S+ RIL  G+  +E+AVS+LPG PSAVWT K   +D++ AYI
Sbjct: 407  LADEETPRIYAICGRGAQSTFRILNQGVEAAELAVSELPGNPSAVWTTKLRADDQYHAYI 466

Query: 473  VVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN 532
            VVSF NATLVLSIGETVEEV+D+GFL   P+LAV  IG+D+L+QVHP GIRHIR D R+N
Sbjct: 467  VVSFANATLVLSIGETVEEVTDTGFLTNAPTLAVQQIGEDALVQVHPHGIRHIRADRRVN 526

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-EMSGDVACLDIAS 591
            EWR P  +TIV+  +N  Q+ IALS GE++YFE+D  GQL E ++H +MS  +  L +  
Sbjct: 527  EWRAPQGQTIVEAATNSRQIAIALSNGEIVYFEMDNMGQLNEHQEHRQMSAYITTLALGE 586

Query: 592  VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
            VPEGR R+R++AVG  D T+RILSLDPD C++ +S+Q++   P SL  +E+    G E G
Sbjct: 587  VPEGRVRARYIAVGCEDQTVRILSLDPDSCLEPISMQALQGVPSSLCIIEMM-DTGIEQG 645

Query: 652  ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
                 + +LN GL NG+  RT++D +TGQLSD+R+RF+G +  KLF + + G  A+L LS
Sbjct: 646  H---GTQYLNIGLSNGIFLRTILDTITGQLSDTRARFIGAKSVKLFRISIQGHPAVLALS 702

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            ++PW+ Y  + R  LTPLSYE LE+ ++F ++QC EGVV+VAGN LR+FT+E+LG  FN+
Sbjct: 703  TKPWVSYTFQNRLYLTPLSYEMLEHGSAFVTEQCPEGVVAVAGNTLRIFTVEKLGNIFNQ 762

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQM 831
             ++PL+YTPR+F L    +  V+IE+D    +  E+         A G+ E  N   +  
Sbjct: 763  VSIPLKYTPRKFALHAPTRTFVVIESDHATFSPSEK---------AKGIIEKEN---EGF 810

Query: 832  ENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVN 891
            E  DD    DPL   Q+G+ +  + +W SCIR+++P    T   +EL+DNEAAFS+  V 
Sbjct: 811  EIDDDITNLDPL---QFGHVRNAAGRWASCIRLIEPFEGRTLETIELEDNEAAFSVAMVQ 867

Query: 892  FHDKEHGT-----LLAVGTAKGLQFWPKRNIVAGYIHIYRFV--EEGK-SLELLHKTQVE 943
            F    H T      + VGT + +   P R+  +GY+H+YR V  E+G+  L  +HKT ++
Sbjct: 868  FRQNPHATNSSEQFVIVGTGQNVNLSP-RSCTSGYLHVYRVVQGEQGQLRLHFIHKTPID 926

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
             +P A+  FQGRLL G G  LR+YD+GKK++LRKCE K  PN IVS++T   R+   D+Q
Sbjct: 927  DVPYAMLAFQGRLLVGAGKSLRIYDIGKKKMLRKCETKSIPNCIVSLHTQGHRVIATDVQ 986

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            ES H+  Y+  +N+L +FADD++PRW+T +  +D++T+AG DKFGN +  RLP  +S E+
Sbjct: 987  ESVHYVIYKHADNRLVVFADDTIPRWMTGSTMVDYETVAGGDKFGNFFVSRLPGSISREV 1046

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL 1123
            +ED TG +I  E+G L GAPNK++ + ++  GD++TSL K +L+ GG E V+  + +G++
Sbjct: 1047 DEDTTGNRIYHEKGYLQGAPNKIDSLCEYFTGDIITSLHKTTLLSGGREVVLTTSFLGAI 1106

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
               + F S++DV+FF  LEMHMR E PPL GRDH+ YRS Y PVK VIDGDLCEQF TL+
Sbjct: 1107 SIYVPFLSKEDVEFFQMLEMHMRAEAPPLAGRDHLLYRSYYIPVKSVIDGDLCEQFNTLA 1166

Query: 1184 LDLQRKIADELDRTPGEILKKLEEIR 1209
             + +R IA+ELDR+  ++ KK+E++R
Sbjct: 1167 AEKKRMIAEELDRSVADVQKKIEDMR 1192


>gi|348667612|gb|EGZ07437.1| hypothetical protein PHYSODRAFT_565381 [Phytophthora sojae]
          Length = 1197

 Score = 1303 bits (3372), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1217 (52%), Positives = 868/1217 (71%), Gaps = 24/1217 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+L +LTLQ PTG+ AA+ GNFS  +  E V ARG VL+LLRP+ +GR+E ++ST++FG 
Sbjct: 1    MHLLNLTLQPPTGVHAAVYGNFSAPQAQEFVAARGDVLQLLRPDEAGRLEVVISTQVFGV 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +R+L  FRLTG ++DY+VVGSDSG+IV+LE NPS   F+    ET+GK+GCRRI PGQYL
Sbjct: 61   VRALQPFRLTGGERDYLVVGSDSGKIVVLEVNPSSGQFEARQSETYGKTGCRRITPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A DPKGRA+++GA EKQ+LVYV+NRD ++RLTISSPLEAH+S+ I   + G+D GF+NPI
Sbjct: 121  AADPKGRALLVGAVEKQQLVYVMNRDASSRLTISSPLEAHRSNAIHLGVVGLDVGFENPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FA +ELDY+EAD D TGQAA +A K+L +YELDLGLNHV+R+WSE V   ANMLV VPGG
Sbjct: 181  FACLELDYAEADADPTGQAARDAVKSLVYYELDLGLNHVTRRWSEQVVRSANMLVAVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGP GVLV  EN V YKN+GHP++   IPRR   P  R ++IVSAATH+Q+ LFF LLQ
Sbjct: 241  GDGPGGVLVLGENTVQYKNEGHPELTCAIPRRQGEP--RDIVIVSAATHKQRDLFFVLLQ 298

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +E GD++K++L++    V E+KI++FDT+PV +SMC+ K+G LF ASEF NH L+QF +I
Sbjct: 299  SELGDLYKISLDYSGNAVEEIKIQFFDTVPVASSMCITKTGLLFCASEFSNHYLFQFLSI 358

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G   D    SS  M+  E      F  R L NL     + SL P+  + + +L  E+ PQ
Sbjct: 359  GEGDDTAKCSSLAMDPTELST---FPLRKLTNLQLASSMPSLSPVTQLLVDDLANEQTPQ 415

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            ++ LCG   RSSLR+LR GL ++EMA S LPGV  AVW +K++  D +D YIVVSF +AT
Sbjct: 416  MYALCGNSNRSSLRVLRHGLPITEMAASALPGVAKAVWCLKESYADPYDKYIVVSFEDAT 475

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVL +GETVEEV+ SGFL    SL V+L+ DDS +Q+H +GIRH+ +   + EW+ PGK+
Sbjct: 476  LVLEVGETVEEVTQSGFLRDHGSLLVALLEDDSKLQIHANGIRHVPKFQPVTEWKAPGKK 535

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
             I    +N  QVVI+L+GGE+IYFE+  +G+L E  K ++  +V  LD+  VPEGR+R +
Sbjct: 536  VIEHCAANSRQVVISLAGGEIIYFELGQSGELAEKGKLDLGFEVCSLDLGEVPEGRQRFQ 595

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            F+AVGS+DNT+RILSLDP+D  +  S  +++S P +L   ++Q+     D      SLFL
Sbjct: 596  FMAVGSWDNTVRILSLDPNDLFRQKSTLALTSHPHTLCLAQLQSEPSTPDSEHSSQSLFL 655

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
            + GL NGVL ++++D +T  L+DSRSRFLG  P KLF V V G+ ++L LSSR W+ Y H
Sbjct: 656  SIGLDNGVLQQSLIDPITANLTDSRSRFLGTNPVKLFRVAVEGKRSILALSSRSWISYFH 715

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
            + R  LTPLS E L YA+SF+S+QC  G+V++    +++ T+++LG+TFN+    LRYTP
Sbjct: 716  QTRRHLTPLSCELLSYASSFNSEQCPGGIVALTNEGMKILTVDQLGDTFNQQKCNLRYTP 775

Query: 781  RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKY 840
            R+ V+    + +V+IE+D                + AA   ++G    D     + +++Y
Sbjct: 776  RKAVVHAASRRLVVIESDHNE-------------YGAAYKRQHGLRIPDIRSAAEQDDEY 822

Query: 841  DPLSDEQYGYPK----AESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE 896
            +   +E   +P+    AE DKW SC+R++DP S  T    EL  +E A SI +  FHD+ 
Sbjct: 823  EDEINEALLFPRGPLPAEKDKWASCVRIVDPVSCQTVVCEELDVDERARSIASCVFHDRG 882

Query: 897  HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRL 956
                + VGT K +Q  P++    GY+ +YR V EG  L L+H T+++ IP A+C+FQGRL
Sbjct: 883  GEAFIIVGTVKKMQLHPQKAPAGGYLRVYRVV-EGMQLVLVHTTEIDDIPHAMCEFQGRL 941

Query: 957  LAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN 1016
            L  +G  LR+YDLGKK++LRKCEN+ FP+ +V +    DRIY  D+ ESFHF KY++DEN
Sbjct: 942  LVSVGRALRIYDLGKKKMLRKCENRNFPSILVELKAAGDRIYASDMHESFHFVKYKKDEN 1001

Query: 1017 QLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ 1076
            QL IFADD VPR++T++  +D+DT+ GADKFGN++  RLP +VSDEI ++PT  +I W+ 
Sbjct: 1002 QLVIFADDCVPRFITSSVLLDYDTLCGADKFGNVFVSRLPSEVSDEI-DNPTANRILWDS 1060

Query: 1077 GKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
            G LNGAPNK+E++ QFHVGDVVTS+ + SLVPGG E++IY T+MG +GA++ F+SR DVD
Sbjct: 1061 GLLNGAPNKLEQVAQFHVGDVVTSMVRTSLVPGGIEAIIYATIMGRIGALIPFTSRQDVD 1120

Query: 1137 FFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
            F++HLEM+MRQE PPLCGRDH++YRS Y PVK+V DGDLCEQF +LS++ Q  +A++LDR
Sbjct: 1121 FYTHLEMYMRQEQPPLCGRDHLSYRSYYIPVKNVTDGDLCEQFSSLSVEKQASVAEDLDR 1180

Query: 1197 TPGEILKKLEEIRNKIV 1213
            TP E+LKKLE+IRN+++
Sbjct: 1181 TPAEVLKKLEDIRNRLL 1197


>gi|312072035|ref|XP_003138882.1| hypothetical protein LOAG_03297 [Loa loa]
 gi|307765956|gb|EFO25190.1| hypothetical protein LOAG_03297 [Loa loa]
          Length = 1197

 Score = 1300 bits (3363), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1221 (52%), Positives = 856/1221 (70%), Gaps = 37/1221 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGT-KTPEIVVARGKVLELLRPE-NSGRIETLVSTEIF 58
            MYLY+LTLQ  + I  AI+G+F G  K  E+ +ARG +L+LL  +  +G+I  L S   F
Sbjct: 1    MYLYNLTLQGSSAINQAIHGSFCGLPKQQEVCIARGNLLQLLFCDPKTGKIHILCSHNAF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G IRSL  FRLTG  KDYIVVGSD+GRIVILEYN  K  F+++HQETFGK+GCRRIVPGQ
Sbjct: 61   GIIRSLLAFRLTGGTKDYIVVGSDAGRIVILEYNTQKVCFERVHQETFGKTGCRRIVPGQ 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            +LA+DPKGRA++IGA E+QKLVY++NRD +A LTISSPLEAHKSH I YS+ G+D GF+N
Sbjct: 121  FLAIDPKGRAILIGAVERQKLVYIMNRDASANLTISSPLEAHKSHCICYSVVGVDVGFEN 180

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P FA +E+DY E D DSTG  A++  + LTFYELDLGLNHV RK++EP+ +  N+L++VP
Sbjct: 181  PTFACLEVDYEEVDHDSTGHLATKIPQTLTFYELDLGLNHVVRKYAEPLVDKGNILISVP 240

Query: 239  GGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLF 295
            GG DGPSGV+VC EN+++YKN G  PD++  +PRR +     +R V+IV AATH+ K ++
Sbjct: 241  GGQDGPSGVIVCCENYLVYKNLGDQPDIKCPVPRRRNELDDCDRTVIIVCAATHKTKLMY 300

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QT+ GDIFKVTLE +++ V+ELKIKYFDTIPV+ +MC+LK+G+LF ASEFGNH LY
Sbjct: 301  FFLVQTDQGDIFKVTLESEHDIVTELKIKYFDTIPVSNAMCILKTGFLFTASEFGNHHLY 360

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M+ EEG +  FF PRGL NL  ++Q++SL P++   I +L  
Sbjct: 361  QIAHLG-DEDDEPEFSSRMQLEEG-ETFFFAPRGLTNLAVVDQMDSLSPLISSYIDDLAN 418

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E++PQI+TL GRG  S++++LR GL V+EMAVS+LPG P+AVWTVK+N++D+FD++IVVS
Sbjct: 419  EDSPQIYTLIGRGALSAVKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKFDSHIVVS 478

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L  +LIGDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 479  FVNATLVLSIGETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIRADRRVNEWK 538

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
             PGKRTI+K   NR QV IAL+GGEL+YFE+D+TGQL E  E+ E+  DV C+ ++ +PE
Sbjct: 539  APGKRTIMKCALNRRQVAIALAGGELVYFELDVTGQLNEYTERRELPADVLCMSLSEIPE 598

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G  RSRFL VG  D T+RI+SLDP DC+  LS+Q++ S PES++ LE+    G E     
Sbjct: 599  GELRSRFLTVGLADKTVRIISLDPQDCLSPLSMQALPSEPESIIVLEM---FGTE--TQS 653

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
             +++ LN GLQNG L RT VD VTG+L+D+R+R+LG +  KLF V +  + A++  SSR 
Sbjct: 654  ASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKLFHVRIQSKDAIMAASSRA 713

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            WL Y ++ RF LTPLSY  LE+AA FSS+QC EG+V++A N LR+ ++E+LG  FN    
Sbjct: 714  WLLYDYQSRFHLTPLSYAALEFAAGFSSEQCPEGIVAIAENTLRILSLEKLGAVFNHVVH 773

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALTA----EEREAAKKECFEAAGMGENGNGNMDQ 830
            PL YTPRR V+      ++IIE D  A T     E R+    E  E A   E        
Sbjct: 774  PLDYTPRRMVVHKASGNLIIIENDHAAFTVKGKMERRKQLADELMEVAKEAEEA------ 827

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTV 890
                 D+     ++D           KW S +RV+      T       ++EAAF+I  V
Sbjct: 828  -----DQQAVKEMADA--------IRKWASTVRVMRSNDGETLSHFPFAEDEAAFAIAMV 874

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
             F ++     + VG    LQ  P R    G I+ +     G +L+LLH+T  + +  A+ 
Sbjct: 875  QFQNQSDTQFVLVGCGCELQLKP-RKANGGCIYTFLLAANGTTLQLLHRTATDEVVNAIH 933

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
             F+G  LAG+G  +RLYDLGK++LL KCEN+  P  +V I +   RI V D QES HF +
Sbjct: 934  DFRGMALAGVGKKVRLYDLGKRKLLAKCENRQIPTQVVDIRSMGQRIVVSDSQESVHFMR 993

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            Y++ + QL IF D++ PR++T    +D+DT+A  D+FGNI  +RLP+ V++E++EDPTG 
Sbjct: 994  YKKQDGQLSIFCDETSPRYVTCVCLLDYDTVAVGDRFGNIAVLRLPKGVTEEVQEDPTGV 1053

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFS 1130
            +  W++G LNGA  K+E I   ++GD +TS+QK SLVPG  + + Y T+ G +G ++ F 
Sbjct: 1054 RALWDRGNLNGASQKLEAIAHLYIGDAITSMQKTSLVPGANDCLCYTTISGIIGILVPFM 1113

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
            SRD+ +FF +LEMHMR E+PPLCGRDH+AYRS YFPVK +IDGDLCEQ+  + LD Q+ +
Sbjct: 1114 SRDEFEFFQNLEMHMRVEYPPLCGRDHLAYRSYYFPVKSIIDGDLCEQYSLMPLDKQKSV 1173

Query: 1191 ADELDRTPGEILKKLEEIRNK 1211
             +EL R   EI KKLE+IR +
Sbjct: 1174 GEELGRKSTEIHKKLEDIRTR 1194


>gi|392593521|gb|EIW82846.1| hypothetical protein CONPUDRAFT_81012 [Coniophora puteana RWD-64-598
            SS2]
          Length = 1213

 Score = 1291 bits (3340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1229 (52%), Positives = 858/1229 (69%), Gaps = 42/1229 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT +  AI GNFSG +T EI+V+ G  LELLRP+  +G++ T++++++FG
Sbjct: 1    MHLYNLTLQPPTAVAQAIVGNFSGARTQEIIVSHGTRLELLRPDVQTGKLSTVIASDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTGS KDY +VGSDSGRIVIL+Y+P  + F K+HQETFGKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGSTKDYAIVGSDSGRIVILDYDPKTSSFVKLHQETFGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHKS  I++ I G+D GF+NP
Sbjct: 121  LATDPKGRSVMISAMEKAKLVYILNRDAAANLTISSPLEAHKSSAIIHHIVGLDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+EADQD TG+AA  A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  LFAALEVDYAEADQDPTGEAAQNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE---RGVLIVSAATH 289
            G        DGPSGVLVC E+ +IY++   P  R  IPRR+  P E   RGV+IV+A  H
Sbjct: 241  GQVASSERFDGPSGVLVCCEDHIIYRHMDKPQHRVPIPRRSH-PLEDPKRGVIIVAAVMH 299

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            + K  FFFLLQ+E GD+FKVT++HD + V  LKIKYFDT+PV +S+C+LKSG+LF ASEF
Sbjct: 300  KMKGAFFFLLQSEDGDLFKVTIDHDEDEVKSLKIKYFDTVPVASSLCILKSGFLFVASEF 359

Query: 350  GNHALYQFQAIGADPDVEASSSTLMET---EEGFQPV---FFQPRGLKNLVRIEQVESLM 403
            GNH LYQFQ +G D D    SST   +    E F P+    F+PRGL NL   +++ESL 
Sbjct: 360  GNHYLYQFQKLGDDDDEPEFSSTSFPSFGMAESFIPLPHAHFRPRGLDNLALADEIESLD 419

Query: 404  PIMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
            PI+D ++ N+    + PQIFT CGRG RS+ R+LR GL V E   S+LPG+P+AVWT K+
Sbjct: 420  PILDAKVMNILPNSDTPQIFTACGRGSRSTFRMLRHGLEVEESVSSELPGIPNAVWTTKR 479

Query: 463  NVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
              +D +D+YI++SF N TLVLSIGET+EEV D+GFL + P+LAV  IG D+L+QVHP GI
Sbjct: 480  TEDDPYDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPQGI 539

Query: 523  RHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHE-MS 581
            RH+  D R+NEWR P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E +  + M 
Sbjct: 540  RHVLSDRRVNEWRVPQGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEYQDWKAMG 599

Query: 582  GDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE 641
              V  L +  VPEGR+R+ +LAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++   +
Sbjct: 600  STVLALSVGEVPEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSAICIAD 659

Query: 642  -VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVV 700
             + AS+          ++F+N GLQNGVL RTV+D + GQL+D+R+RFLG RP +L  V 
Sbjct: 660  MLDASINKSQ-----PTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRLVRVT 714

Query: 701  VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVF 760
            V     +L LSSR WL Y H+     TPL +E L+YA SFS++   EG++ + G+ LR+F
Sbjct: 715  VQKNPGILALSSRSWLNYTHQSLMHFTPLIFENLDYAWSFSAELSPEGLIGITGSVLRIF 774

Query: 761  TIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGM 820
             I +LG    + A+PL YTPR+FV  P  + + +I+ D   ++     AA+K+  E    
Sbjct: 775  QIPKLGMKLKQDAVPLSYTPRKFVSHPANQYLYLIQGDHRVMS---ESAAEKKLQEMRTK 831

Query: 821  GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
            G+  +  + Q            L  E +G PKA +  W S I ++DP  A T   +EL +
Sbjct: 832  GQKVDEEILQ------------LPVEVFGRPKAPAGTWASAICIIDPIEARTIHTVELDN 879

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NE+AFS+  V F  +++   L VGTA      P R+  +GY+  YRF +EG+SLELLHKT
Sbjct: 880  NESAFSVAVVPFAARDNELHLVVGTAADTLLTP-RSCRSGYLRTYRFTDEGRSLELLHKT 938

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            + + +PLA+  FQGRL+AG+G  LRLY++GKK+LLRK ENK F + IV++NT   RI VG
Sbjct: 939  ETDDVPLAVMAFQGRLIAGVGKSLRLYEIGKKKLLRKAENKSFASAIVTLNTQGSRIIVG 998

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+QES HF  Y+  EN+L IFADD  PRW+TA   +D+ T+A  D+FGN++  RL   VS
Sbjct: 999  DMQESVHFAAYKAPENRLLIFADDMQPRWVTALTMVDYTTIAVGDRFGNVFINRLDMRVS 1058

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            D++++DPTG  I  E+G+L+GAP+K + +  FHVGD++TS+ K SLV GG E ++Y  + 
Sbjct: 1059 DQVDDDPTGAGILHEKGQLSGAPHKTKLLCHFHVGDLITSIHKVSLVAGGREVLLYTGIH 1118

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G ++ F S++DVDF S LE HMR E   L GRD +++R  Y PVK V+DGDLCE F 
Sbjct: 1119 GTIGILVPFVSKEDVDFISTLEQHMRSEQSSLVGRDQLSWRGYYTPVKAVVDGDLCEAFA 1178

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIR 1209
             L+   Q  IA ELDRT GE+LKKLE++R
Sbjct: 1179 RLTGSKQSAIAGELDRTVGEVLKKLEQLR 1207


>gi|301110252|ref|XP_002904206.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
 gi|262096332|gb|EEY54384.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
          Length = 1197

 Score = 1289 bits (3335), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1217 (52%), Positives = 866/1217 (71%), Gaps = 24/1217 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+L +LTLQ PTG+  A+ GNFS  +  E+VVARG VL+LLRP+ SGR+E ++ST++FG 
Sbjct: 1    MHLLNLTLQPPTGVHLAVYGNFSAPQAQELVVARGDVLQLLRPDESGRLEVVISTQVFGV 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +R+L  FRLTG  +DY+VVGSDSG+IV+LE NP+ + F+    ET+GK+GCRRI PGQYL
Sbjct: 61   VRALQPFRLTGGDRDYLVVGSDSGKIVVLEVNPTSSRFEARQSETYGKTGCRRITPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A DPKGRAV+IGA EKQ+LVYV+NRD ++RLTISSPLEAH+S+ I   + G+D GF+NPI
Sbjct: 121  AADPKGRAVLIGAVEKQQLVYVMNRDASSRLTISSPLEAHRSNAIHLGVVGLDVGFENPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FA++ELDY+EAD D +GQAA E  K L +YELDLGLNHV+R+WSE V   AN LV VPGG
Sbjct: 181  FASLELDYAEADADPSGQAAREVVKTLVYYELDLGLNHVTRRWSEQVVRSANRLVAVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
            GDGP GVLV  EN V YKN+GHP++   IPRR      R ++IVSAATH+Q+ LFF LLQ
Sbjct: 241  GDGPGGVLVLGENTVQYKNEGHPELTCAIPRREG--EHRDIIIVSAATHKQRDLFFVLLQ 298

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +E GD++K++L++    V E+KI++FDTIPV +SMC+ K+G LF ASEF NH L+QF +I
Sbjct: 299  SELGDLYKISLDYSGNVVEEIKIQFFDTIPVASSMCITKTGLLFCASEFSNHYLFQFLSI 358

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G   D    SS  M+  E F    F  R L NL       SL P+  + + +L  E+ PQ
Sbjct: 359  GEGDDAAKCSSLAMDPTE-FST--FPLRKLTNLALASSSASLSPVTQLLVDDLANEQTPQ 415

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            ++ LCG   RSSLR+LR GL ++EMA S LPGV  AVW +K++  D +D YIVVSF +AT
Sbjct: 416  MYALCGNNNRSSLRVLRHGLPITEMAASALPGVAKAVWCLKESYADPYDKYIVVSFEDAT 475

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVL +GETVEEV+ SGFL    SL V+L+ DDS +Q+H +GIRH+ +   + EW+ PGK+
Sbjct: 476  LVLEVGETVEEVAQSGFLRDHGSLLVALLEDDSKLQIHTNGIRHVPKFQPVTEWKAPGKK 535

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
             I    +N  QVVI+L+GGE+IYFE+  +G+L E  K ++  +V  LD+  VPEGR+R +
Sbjct: 536  VIEHCAANSRQVVISLAGGEIIYFELGQSGELAEKGKLDLGFEVCSLDLGEVPEGRQRFQ 595

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            F+AVGS+DNT+RILSLDP++  +  S  +++S P +L   ++Q      D      +LFL
Sbjct: 596  FMAVGSWDNTVRILSLDPNELFRQKSTLALTSHPHTLCLAQLQNEPSTPDSEHSSQALFL 655

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
            + GL NGVL ++++D +T  L+DSRSRFLG  P KLF V V G+ ++L LSSR W+ Y H
Sbjct: 656  SIGLDNGVLQQSLIDPITATLADSRSRFLGTNPVKLFRVAVEGKRSILALSSRAWISYFH 715

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
            + R  LTPLS E L YA+SF+S+QC  G+V++    +++ T+++LG+TFN+    LRYTP
Sbjct: 716  QTRRHLTPLSCELLSYASSFNSEQCPGGIVALTNEGMKILTVDQLGDTFNQQKCNLRYTP 775

Query: 781  RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKY 840
            R+ V+    + +V+IE+D                + AA   ++G    D     D E++ 
Sbjct: 776  RKAVVHSPSRRLVVIESDHNE-------------YGAAYKRQHGLQIPDIRSANDLEDEA 822

Query: 841  DPLSDEQYGYPK----AESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE 896
            +   ++   +P+    AE DKW SC+R++DP S  T    EL  +E A SI    FHD+ 
Sbjct: 823  EDEINDALLFPRGPLPAEKDKWASCVRIIDPASCQTVVCEELDVDERARSIAACVFHDRG 882

Query: 897  HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRL 956
                + VGT K +Q  P++    GY+ +YR V EG  L L+H T+++ IP A+C+FQGRL
Sbjct: 883  GEAFIIVGTVKKMQLHPQKAPAGGYLRVYRVV-EGMQLVLVHTTEIDDIPHAMCEFQGRL 941

Query: 957  LAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN 1016
            L  +G  LR+YDLGKK++LRKCEN+ FP+ +V +    DRIY  D+ ESFHF KY++DEN
Sbjct: 942  LVSVGRALRIYDLGKKKMLRKCENRNFPSILVELKAAGDRIYASDMHESFHFVKYKKDEN 1001

Query: 1017 QLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ 1076
            QL IFADD VPR++T++  +D+DT+ GADKFGN++  RLP +VSDEI ++PTG +I W+ 
Sbjct: 1002 QLVIFADDCVPRFITSSVLLDYDTLCGADKFGNVFVSRLPSEVSDEI-DNPTGNRILWDS 1060

Query: 1077 GKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
            G LNGAPNK+E++ QFHVGDVVTS+ ++SLVPGG E+VIY T+MG +GA++ F+SR+DVD
Sbjct: 1061 GLLNGAPNKLEQVAQFHVGDVVTSMVRSSLVPGGTEAVIYATIMGRIGALIPFTSREDVD 1120

Query: 1137 FFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
            F++HLEM+MRQE PPLCGRDH++YRS Y PVK++ DGDLCEQF +LS++ Q  +A++LDR
Sbjct: 1121 FYTHLEMYMRQEQPPLCGRDHLSYRSYYIPVKNITDGDLCEQFSSLSVEKQASVAEDLDR 1180

Query: 1197 TPGEILKKLEEIRNKIV 1213
            TP E+LKKLE+IRN+++
Sbjct: 1181 TPAEVLKKLEDIRNRLL 1197


>gi|428180158|gb|EKX49026.1| hypothetical protein GUITHDRAFT_68305 [Guillardia theta CCMP2712]
          Length = 1202

 Score = 1288 bits (3333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/1227 (53%), Positives = 864/1227 (70%), Gaps = 39/1227 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LY+LTLQ+   I     GNFS  K  EIV++ GK LEL+RP+ +G+I+++   E FG 
Sbjct: 1    MFLYALTLQRSGAITCTAYGNFSAPKQHEIVISHGKTLELIRPDQNGKIQSICQMECFGL 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRS+A FRL GS KDY+V+G+DSGRI +LE++  +N F+++H ET+GKSGCRRIVPGQ+L
Sbjct: 61   IRSMASFRLPGSNKDYLVLGADSGRISVLEFSKERNQFERVHLETYGKSGCRRIVPGQFL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A DPKGRAVMI A EKQKLVYV NRD +++LTISSPLEAHK+ TI +SI G+D GFDNPI
Sbjct: 121  ASDPKGRAVMISAIEKQKLVYVFNRDASSKLTISSPLEAHKASTIHFSIVGVDVGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAA+E+DYS+AD D TGQ+A E  K LTFYELDLGLNHV RK SEP+D  +NML+ VPG 
Sbjct: 181  FAALEMDYSDADADETGQSAEEFNKVLTFYELDLGLNHVVRKASEPIDAASNMLIPVPGD 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGPSGVLVCAEN + YK   H DV A+IPRR  +P ++ +LI   +  +QK  FFFLLQ
Sbjct: 241  TDGPSGVLVCAENKIAYKKPDHEDVVALIPRRQGMPLDQPLLITGYSHLKQKDGFFFLLQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +E GD++++TL +++E VSE+ I YFDT+PV  S+ +LK+G+LF ASEFGNHALYQF +I
Sbjct: 301  SEIGDLYRLTLTYNDEEVSEINITYFDTVPVAQSITILKTGFLFVASEFGNHALYQFLSI 360

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
                + +     +    E  +   F PR LKNL+ ++++ESL PI+DMR+ +L  EE PQ
Sbjct: 361  KGSDESDMMPVEVEIEGETIEIPHFAPRPLKNLLLVDEMESLSPILDMRVLDLAGEETPQ 420

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            I+ LCG+GPRS+LR LR GLAV+EMAVS+LP  P AVWTVK +  D  D YIVV+F NAT
Sbjct: 421  IYALCGKGPRSTLRTLRHGLAVAEMAVSELPSNPLAVWTVKGSSKDAADKYIVVTFANAT 480

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            +VLSIG+TVEEV+DSGFL T  +L+VSL+GDDSL+QVHP+G+R +R D RI+++  P K 
Sbjct: 481  IVLSIGDTVEEVTDSGFLATNKTLSVSLLGDDSLLQVHPNGLRTVRSDKRISQFTPPNKG 540

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM-SGDVACLDIASVPEGRKRS 599
             I  V  N+ QVV+AL+   +IYFE+D  GQL E  K E+  G +A LDI+ +  GR R 
Sbjct: 541  VINLVAVNQQQVVVALADHTMIYFELDAVGQLQEKAKPEIGGGQIAALDISPLGAGRSRG 600

Query: 600  RFLAVG-SYDNT--IRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPA 656
            RFLAVG S D +  +RILSLDP   M I+S Q++ + PESL  +E+       DG     
Sbjct: 601  RFLAVGASVDGSWFVRILSLDPGSFMHIVSRQALPAKPESLCLIEISIGAAQSDGGT--P 658

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLS-DSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPW 715
            +LFL AGL+NGVL R  VD +TGQL+ + R+RFLG +P KLF V+V  + A+L LSSR W
Sbjct: 659  TLFLFAGLENGVLMRITVDPITGQLAPEFRTRFLGTKPVKLFKVLVQEQPAVLALSSRSW 718

Query: 716  LGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
            L Y  +GR+ +TPLSYETLEYA+ F+SDQC EG V VA N LR+ T+ERLGE FN+ ++ 
Sbjct: 719  LAYNFQGRYQITPLSYETLEYASGFASDQCPEGFVCVAANTLRILTVERLGEVFNQHSMK 778

Query: 776  LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGD 835
            L +TPR+  L       V++ETD  +   + +EA    C                +   +
Sbjct: 779  LSFTPRKSALLKDSGCFVVLETDHNSDMEKAKEA---RC---------------DVAEDE 820

Query: 836  DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDK 895
            +E   + L    YG  +A   KW S +RV+DP    T  ++EL  NEAA S+C   F+D+
Sbjct: 821  EEENENKLPHSIYGEQRAGEAKWASRVRVIDPNERETKQIIELDPNEAALSVCVATFYDR 880

Query: 896  EHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGR 955
            +  T L  GTA G +   +    +G++H Y  V  G  L  +HKT ++G+P ALC FQGR
Sbjct: 881  KGHTFLCFGTAVGHKVGSRTG--SGFLHTYSVV--GSQLTFVHKTPIDGVPRALCSFQGR 936

Query: 956  LLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDE 1015
            LL G+G  LRLY++GK++LLRKCEN+  PN +V+I+T  DRIYVGD+ ES  F KY R  
Sbjct: 937  LLVGVGSALRLYEMGKRKLLRKCENRNIPNLVVTISTMGDRIYVGDVAESISFLKYNRIL 996

Query: 1016 NQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWE 1075
            N+L IFADD+ PRW+TAA  +D+DT+AGADKFGNI+  RLP +VSDEI E+P G    +E
Sbjct: 997  NELVIFADDTHPRWMTAACPVDYDTVAGADKFGNIFLTRLPDNVSDEISEEP-GAVGMFE 1055

Query: 1076 QGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDV 1135
               L GA  K EEIVQ+HVG+ V SLQKA+L PGG +++IYGT+ G +GA+  F SR+DV
Sbjct: 1056 GNDLQGAHYKAEEIVQYHVGETVCSLQKATLSPGGSDAIIYGTMYGGIGALQPFVSREDV 1115

Query: 1136 DFFSHLEMHMR-----QEHPP----LCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDL 1186
            DFF HLEMH+R     +EH P    +CGRD +++RS YFPVKDV+DGDLCE F  LS   
Sbjct: 1116 DFFLHLEMHLRGAAGAREHKPAGEGICGRDQLSFRSYYFPVKDVVDGDLCETFNYLSPSR 1175

Query: 1187 QRKIADELDRTPGEILKKLEEIRNKIV 1213
            Q++IA++LDRTPGE+ KKLE++RN+++
Sbjct: 1176 QKQIAEDLDRTPGEVAKKLEDMRNRLL 1202


>gi|169848339|ref|XP_001830877.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
 gi|116508046|gb|EAU90941.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
          Length = 1213

 Score = 1285 bits (3326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/1228 (52%), Positives = 839/1228 (68%), Gaps = 40/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT  I AI GNFSG +  EI+V+ G  LELLRP+  +G++ T++ST+ FG
Sbjct: 1    MHLYNLTLQPPTANIQAIVGNFSGVRQQEIIVSHGTRLELLRPDPQTGKVSTVISTDAFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            ++RSLA FRLTG  KDY ++GSDSGRIVIL+Y+P    F K+HQETFGKSG RRIVPGQY
Sbjct: 61   SVRSLAAFRLTGGTKDYAILGSDSGRIVILDYDPKTTSFVKLHQETFGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRAVMIGA EK KLVY+LNRD AA LTISSPLEAHK+  I++ I G+D GF+NP
Sbjct: 121  LATDPKGRAVMIGAMEKAKLVYILNRDAAANLTISSPLEAHKNSAIIHHIVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE+DQD TG+A + A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  LFAALEVDYSESDQDPTGEAFNNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHR 290
            G        DGPSGVLVC E+ +IY++   P  R  IPRR       ERGV+I +A  H+
Sbjct: 241  GQLASSDRYDGPSGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLEDPERGVIITAAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ E GD+FKVT+EH+ E V  LKIKYFDT+PV +S+C+LKSG+LF ASEFG
Sbjct: 301  MKGAFFFLLQNEDGDLFKVTIEHEEEDVKALKIKYFDTVPVASSLCILKSGFLFVASEFG 360

Query: 351  NHALYQFQAIGADPDVEASSST------LMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            NH LYQFQ +G D D    +ST      + +        +F+PR L NL   +++ESL P
Sbjct: 361  NHHLYQFQKLGDDDDEPEVTSTSYPSFGMADPTAALPRAYFKPRPLDNLALADELESLDP 420

Query: 405  IMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            I+D ++ NL    +APQIF  CGRG RS+LR LR GL V E   S+LPG+P+AVWT KK 
Sbjct: 421  ILDSKVLNLLPNSDAPQIFAACGRGARSTLRTLRHGLEVEESVSSELPGIPNAVWTTKKT 480

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
              D +D+YI++SF N TLVLSIGET+EEV D+GFL ++P++AV  IG D+L+QVHP GIR
Sbjct: 481  EEDPYDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSSPTIAVQQIGADALLQVHPHGIR 540

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSG 582
            H+  D R+NEWR P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M  
Sbjct: 541  HVLADRRVNEWRVPQGKTIVTATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS 600

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE- 641
             V  L I  VPEGR+R+ +LAVG  D T+RI+SLDP+  ++ LS+Q++++PP S+   + 
Sbjct: 601  TVLALSIGEVPEGRQRTPYLAVGCEDQTVRIISLDPETTLETLSLQALTAPPSSICIADM 660

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            + AS+          ++F+N GLQNGVL RTV+D + GQL+D+R+RFLG RP KL  V V
Sbjct: 661  LDASINKSQ-----PTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLIRVPV 715

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
                A+L LSSR W+ Y H+     TPL Y+ L+YA SFS++   EG++ +AGN LR+FT
Sbjct: 716  HKNPAILALSSRSWINYTHQNMMHFTPLIYDNLDYAWSFSAELSPEGLIGIAGNVLRIFT 775

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I +LG    +  LPL YTPR+ +  P+     +IE+D   + +EE   AK +  +  G  
Sbjct: 776  IPKLGSKLKQDTLPLSYTPRKLITHPENNYFYLIESDH-RVYSEEATKAKLDELQKKG-- 832

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
                      +  D+E    P S  ++G PKA +  W S IR++DP    T  +  L +N
Sbjct: 833  ----------KKIDEEIISLPPS--EFGRPKAPAGTWASNIRIIDPVENKTVAVFPLDNN 880

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            EAAFSI  V F  +     L VGTAK     P R   +G++  Y+F E G  LELLHKT+
Sbjct: 881  EAAFSIAIVPFSARNGELHLVVGTAKDTTVSP-RTCESGFLRTYKFTENGTGLELLHKTE 939

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
             + +P+AL  FQGRL AG+G  LR+YD+GKK+LLRK ENK F   IV++ T   RI VGD
Sbjct: 940  TDDVPMALLAFQGRLAAGVGKALRIYDIGKKKLLRKVENKSFTTAIVTLTTQGSRILVGD 999

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  +  Y++ EN+L  FADD+ PRW+TA   +D++T+   D+FGNI+  RL   VSD
Sbjct: 1000 MQESVQYVVYKQPENRLLTFADDTQPRWVTAITMVDYNTIVAGDRFGNIFVNRLDSKVSD 1059

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            +++EDPTG  I  E+  L GAP+K + I  FHVGD++TSL K SLV GG E ++Y  + G
Sbjct: 1060 QVDEDPTGAGILHEKPILMGAPHKTKMIAHFHVGDIITSLHKVSLVAGGREVIVYTGLHG 1119

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++G ++ F S++DVDF S LE HMR E P L GRD +AYR  Y PVK V+DGDLCE +  
Sbjct: 1120 TIGILMPFISKEDVDFISTLEQHMRTEQPSLVGRDQLAYRGYYVPVKAVVDGDLCETYAH 1179

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIR 1209
            L    Q  IA+ELDRT GE+LKKLE++R
Sbjct: 1180 LPASKQSSIANELDRTVGEVLKKLEQMR 1207


>gi|328770812|gb|EGF80853.1| hypothetical protein BATDEDRAFT_29900 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1213

 Score = 1283 bits (3321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1233 (50%), Positives = 859/1233 (69%), Gaps = 43/1233 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M LY+LTLQQ   I  ++ GNFSG K+ EIVVA   VLELLRP+ ++G+I +L+S ++FG
Sbjct: 1    MQLYNLTLQQSEAITCSVLGNFSGIKSQEIVVAHTSVLELLRPDPSTGKIVSLLSHQVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL G+ KDY+VVGSDSGRIVILEYNP+KN FDK+HQET+GK+G RR+VPGQY
Sbjct: 61   LIRSLAAFRLAGASKDYLVVGSDSGRIVILEYNPAKNTFDKVHQETYGKTGARRVVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRAVMIGA EKQKL Y+LNRD++ +LTISSPLEAHK+  I + I G+D G++NP
Sbjct: 121  LAADPKGRAVMIGAIEKQKLAYILNRDSSLKLTISSPLEAHKTAIICHGIIGVDVGYENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFA+IE+DYS+ADQD TG+AA +A+K LT+YELDLGLNH+ RKW+E +D  AN L+ +PG
Sbjct: 181  IFASIEVDYSDADQDPTGEAARDAEKMLTYYELDLGLNHIVRKWTEKIDFSANHLIAIPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD-----LPA-ERGVLIVSAATHRQKT 293
            G DGPSGVLVC+E  + +K+   P     IP+R D     +P  +  V++VS+  HR K 
Sbjct: 241  GDDGPSGVLVCSEGRITWKHMQKPSFCVPIPQRPDPLTSVIPGTQNKVIVVSSVVHRLKR 300

Query: 294  LFFFLLQTEYGDIFKVTLEHDNE------HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
             FF L QTE GD+FK+T+E   +       V  +KIKYFDTIPV  ++ +LKSG+LFAAS
Sbjct: 301  GFFVLAQTEVGDVFKITVECTADSSGNAGQVQAIKIKYFDTIPVAVNLSLLKSGFLFAAS 360

Query: 348  EFGNHALYQFQAIGADPDVEASSSTL-------METEEGFQPVFFQPRGLKNLVRIEQVE 400
            EFGNH LYQ + +G D + +   S++       +   +    V F PR L+NL  ++++E
Sbjct: 361  EFGNHYLYQIENLGDDDESQVEYSSVDFPQGDSLPDSDSMPVVAFIPRELRNLAPVDEME 420

Query: 401  SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
            SL P++D ++ NL +E +PQI+ LCGRG RS+ RILR GL VSEMAVS+LPG P+A+WTV
Sbjct: 421  SLCPLIDAKVLNLTDENSPQIYALCGRGSRSTFRILRHGLDVSEMAVSELPGNPNAIWTV 480

Query: 461  KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPS 520
            +++V+D +D+YI++SF NATLVLSIGETVEEV+D+G L TT ++ V  +G+++L+QV+P 
Sbjct: 481  RRSVSDIYDSYIIISFINATLVLSIGETVEEVTDTGVLATTSTITVGQLGENALVQVYPQ 540

Query: 521  GIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHE 579
            GIR+IR D R++EW+ P  ++IV    N+ QVV+ALS  E++YFE+D++G L E + + E
Sbjct: 541  GIRYIRADKRVSEWKAPTNQSIVSAACNQRQVVVALSNNEIVYFELDVSGHLNEFQDRKE 600

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLF 639
            MS  V CL ++ +P GR R+RFLA+G  D T+RILSLDP+ C+  LS+Q++S+PP+SL  
Sbjct: 601  MSSRVLCLSLSPIPTGRLRARFLAIGCADLTVRILSLDPESCLHPLSMQALSAPPDSLAM 660

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
            +++     G       ++LFLN GL NGVL +T VD  +G +SD+R RFLG R  KLF +
Sbjct: 661  IDMPDPTTGV------SNLFLNIGLANGVLLKTCVDSGSGNMSDTRMRFLGSRGVKLFLL 714

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
             + G   +L LSSRPW+ + +  R  L PLSYE+LEY +SF S+QC EG+V++ GN LR+
Sbjct: 715  KIQGETGLLALSSRPWISFTYHSRSKLMPLSYESLEYGSSFCSEQCTEGIVAITGNTLRI 774

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAG 819
               E+LG  F + ++PL+YTPRRF+     +  V+IE+D G     +R     +  E   
Sbjct: 775  LNTEKLGSVFKQASIPLKYTPRRFIFDQVSQNFVVIESDHGVFCPSDR----AKILETKA 830

Query: 820  MGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
              +   G + +            L+ EQ+G+ KA  ++W SCIRV+ P    T  L +L 
Sbjct: 831  TLDADEGTIPE-----------ELAVEQFGHSKAGPERWASCIRVISPIHGETLHLEDLD 879

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            DNEAAF I    F      T + VGTA  +      +   GY+ +Y+   +G SLE LHK
Sbjct: 880  DNEAAFCISFCIFQSSLTTTHIVVGTASNVNL-SSSSFTEGYLRVYKLAPDGTSLEFLHK 938

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T ++GIP  +C FQGRLL G+G +LR+YDLGKK++LRKCE K FP TIV+++T  +RI +
Sbjct: 939  TPIKGIPKVMCSFQGRLLVGVGSLLRIYDLGKKKMLRKCECKGFPTTIVTLHTQGNRIIL 998

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD QES H+  YR  +N++ IFADD++PRW+TA   +D+DT+ G DK GNI+  RL  +V
Sbjct: 999  GDAQESVHYAMYRAFDNRIVIFADDTIPRWVTATCMVDYDTVVGGDKMGNIFVNRLSAEV 1058

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S  I+ED TG +  +++G L GAP+K+     F +G+ +TSL K SLVPGG E ++Y T+
Sbjct: 1059 SKGIDEDTTGNQAIFDRGYLQGAPHKVHHEADFFLGETLTSLTKTSLVPGGREILLYTTL 1118

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            MG +G ++ F S+DDVDFF  LEM MR E PPLCGRDH+AYRS Y PV  +IDGDLCE F
Sbjct: 1119 MGGIGLLIPFISKDDVDFFQTLEMTMRSECPPLCGRDHLAYRSFYTPVHAIIDGDLCEMF 1178

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
              +  D +R IA+ +DR+  ++ KKLE++R ++
Sbjct: 1179 NVMVGDKKRGIAESVDRSVADVGKKLEDMRTRV 1211


>gi|313235544|emb|CBY10999.1| unnamed protein product [Oikopleura dioica]
          Length = 1185

 Score = 1281 bits (3315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1221 (51%), Positives = 849/1221 (69%), Gaps = 49/1221 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ T I  A++GN+SG K  EI VARG +LE+++P+ N+G+I T+ S E F 
Sbjct: 1    MHLYNLTLQKSTNITHAVHGNYSGQKQQEIAVARGTLLEIIKPDPNTGKIHTICSRECFS 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIV+GSDSGRI ILEYNP K   +++H ETFGKS  RRIVPGQ+
Sbjct: 61   LIRSLISFRLTGGTKDYIVLGSDSGRISILEYNPDKGSLERVHCETFGKSMARRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA+M+ ACEKQKLVY+LNRD  ARLTISSPLEAHKS TI +   G+D GF+NP
Sbjct: 121  LAHDPKGRAIMVAACEKQKLVYILNRDAQARLTISSPLEAHKSSTIHFYPVGLDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA IELDY +AD D TG+AA EA+++LTFYELDLGLNHV RK+++P++  ANML+ VPG
Sbjct: 181  VFAVIELDYEDADADPTGEAAQEAKQSLTFYELDLGLNHVVRKYTDPLECAANMLIPVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGP GV+VCAEN++IYKN G  PD+R  IPRR    D P ERG++IV+ ATH+ +++F
Sbjct: 241  GSDGPGGVIVCAENYLIYKNFGDQPDIRFPIPRRRNDLDDP-ERGMIIVAHATHKTRSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFLLQTE GD+FKVTLE + + V+E+++KYFDT+PV++S+CVL++G+LF A EFGNH LY
Sbjct: 300  FFLLQTEQGDLFKVTLETEEDIVTEIRLKYFDTVPVSSSLCVLRTGFLFVAGEFGNHNLY 359

Query: 356  QFQAIGADPD-VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
            Q   +G D D  E SS+  +E  E F   FF PRGL+NL   ++++SL P+++  +A+L 
Sbjct: 360  QITRLGEDDDEPEFSSAEPLEEGETF---FFTPRGLRNLALTDEMDSLSPVLNCEVADLA 416

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
             E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVK + + + D+YI+V
Sbjct: 417  NEDTPQLYVTCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKTSADADHDSYIIV 476

Query: 475  SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEW 534
            SF NATLVLSIGETVEE++DSGFL TTP+L+  L+G+D+L+Q++P GIRHIR D R+NEW
Sbjct: 477  SFVNATLVLSIGETVEEITDSGFLGTTPTLSSGLMGEDALVQIYPEGIRHIRSDRRVNEW 536

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVP 593
            R P ++ IV+   NR QVVIAL+GGE++YFE+D TGQL E  E+ E   ++  LD+  VP
Sbjct: 537  RAPDRKQIVRCACNRQQVVIALTGGEIVYFEMDPTGQLNEYTERREFGSEIIALDVGDVP 596

Query: 594  EGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGAD 653
             G +R RFLAVG  D T+RI+SLDP+DC+Q  ++Q++ + P+ +   E            
Sbjct: 597  AGEQRCRFLAVGLSDGTVRIISLDPNDCLQPRTMQALPTVPQDVAITE------------ 644

Query: 654  HPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
            H     L  GLQNGVL RT +D VTG++SD+R+R+LG +  KL+ VV  G  ++L +SSR
Sbjct: 645  HKGQYVLQIGLQNGVLLRTTIDSVTGEISDTRTRYLGTKAVKLYKVVTEGENSVLAVSSR 704

Query: 714  PWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETA 773
             WL Y H+ RF LTPLSYE L+ A  FSS+QC EG+V++AGN LR+  +E+LG  FN+  
Sbjct: 705  SWLSYRHQQRFHLTPLSYEALDSATGFSSEQCPEGIVAIAGNTLRILALEKLGAVFNQVR 764

Query: 774  LPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN 833
             PL+ TPR+FV+ P    +VI E+D  A T E ++        AA + E           
Sbjct: 765  NPLQLTPRKFVIHPDTANLVIAESDHNAFTEETKKQPLAAEMAAAFLKEE---------- 814

Query: 834  GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFH 893
                     L +  +G P+A    W S I ++ P +  T   + L+  +   S+C   F 
Sbjct: 815  ---------LPESDFGSPRAGQGMWASKISIISPETGGTLHHVWLEQGQGIHSMCLTKFQ 865

Query: 894  DKEHGTL---LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
                G +   L VGT+  +   P+++   G +H+YR +  G+  E LH T  E  P A+ 
Sbjct: 866  SV--GMIDWYLLVGTSNSMILNPRQS-QGGSLHVYR-IHAGERFEYLHTTYTEDAPTAIT 921

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
             FQGR+L G+G +LR+YDLGKK++LRKCE +  PN +  I T   RI   D QES  F K
Sbjct: 922  PFQGRVLIGVGNLLRIYDLGKKKMLRKCELRSIPNRVTKIITAGQRIIAFDQQESAFFIK 981

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            YR  ENQL IFADD+ PRW+TAA  +D+ T+  ADKFG++  +RLP + ++  ++DP+G 
Sbjct: 982  YRVKENQLTIFADDTFPRWVTAACMLDYWTVVIADKFGSVSVIRLPAETNENTQDDPSGA 1041

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFS 1130
            K  W +G LNGA  K E +  F VGD++TS+QK  L+PGGGE ++Y T+ G +G ++ F+
Sbjct: 1042 KALWSRGNLNGASQKAETLNNFFVGDMITSIQKTILIPGGGECIVYATMSGRIGILVPFA 1101

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
            S +D DFF  LEMHMRQEH  L GRDH+A+R  Y+P K ++DGDLCE F  L  D Q+ I
Sbjct: 1102 SNEDADFFQSLEMHMRQEHTFLTGRDHLAFRGYYYPQKSIVDGDLCEAFSLLGQDQQKGI 1161

Query: 1191 ADELDRTPGEILKKLEEIRNK 1211
            A+E+DR   E+ KKLE+IR +
Sbjct: 1162 AEEMDRQLAEVSKKLEDIRTR 1182


>gi|342320507|gb|EGU12447.1| Pre-mRNA-splicing factor RSE1 [Rhodotorula glutinis ATCC 204091]
          Length = 1212

 Score = 1280 bits (3312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1228 (51%), Positives = 853/1228 (69%), Gaps = 40/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARG-KVLELLRPE-NSGRIETLVSTEIF 58
            ++LY  +L   + I  A  GNFSGTK  EI VARG + +ELLR +  +G++E++V  ++F
Sbjct: 2    VHLYHHSLIPSSSITCACVGNFSGTKQQEICVARGGQRIELLRTDAQTGKLESIVEADVF 61

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G IRSL  F+LTG  KDYI++GSDSGRIV+LEY+P+ NVF+K+HQET+G+SG RRIVPGQ
Sbjct: 62   GQIRSLTAFKLTGGSKDYIIIGSDSGRIVVLEYDPNNNVFNKLHQETYGRSGSRRIVPGQ 121

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YLA DPKGRAVMIGA EK KLVY+LNRD AA LTISSPLEAHK   I++SI G+D GF+N
Sbjct: 122  YLATDPKGRAVMIGAMEKSKLVYILNRDAAANLTISSPLEAHKPRAIIHSIVGVDVGFEN 181

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P+FAA+E+DY+EADQD TG A   A+K LT+YELDLGLNHV RKWSE  D  AN+LV VP
Sbjct: 182  PMFAALEVDYTEADQDPTGAAFDAAEKMLTYYELDLGLNHVVRKWSEATDPRANLLVQVP 241

Query: 239  GGG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPA--ERGVLIVSAATH 289
            GG        DGPSGVLVC E+++IYK+QG  + R  IP+RA   A  ERGV+I +A  H
Sbjct: 242  GGQNATMDRFDGPSGVLVCCEDYIIYKHQGAKEHRVPIPKRAHPLADPERGVIITAAVMH 301

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            + K  FFFLLQ+E GD+FKVT+EH+ E V+ LKIKYFDT+P  +S+C+LKSG+LF A+EF
Sbjct: 302  KMKGAFFFLLQSEEGDLFKVTIEHEEEEVTALKIKYFDTVPSASSLCILKSGFLFVATEF 361

Query: 350  GNHALYQFQAIGADPDVEASSST----LMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            GN  LYQF+ +G D D    SST    L    +   P  F+PR L+NL   ++VESL PI
Sbjct: 362  GNPRLYQFEKLGDDDDETEFSSTDYDNLGAGTDPLPPALFRPRELQNLAIADEVESLAPI 421

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++AN   E+ PQI+  CGRG RSSLRILR GL V E   S+LPG P AVWT K    
Sbjct: 422  LDAKVANYLGEDTPQIYAACGRGARSSLRILRQGLEVMEAVSSELPGAPIAVWTTKLRAE 481

Query: 466  --DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
                +DAYI++SF N TLVL+IG+T+EEVSD+GF+ + P+L V  +GDD+L+Q++P GIR
Sbjct: 482  GASSYDAYIILSFVNGTLVLAIGDTIEEVSDTGFISSAPTLGVQQLGDDALLQIYPRGIR 541

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSG 582
            HI  D R+NEW+   + TIV   +N  QVVI LS GEL+YFE+DM GQL E  E+  M  
Sbjct: 542  HILADKRVNEWKVGARETIVCATTNSRQVVIGLSTGELVYFELDMDGQLNEFQERKPMGA 601

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV 642
            ++  L IA VPEGR+R+ +LAVG  D+T+RI+SLDP++ +  LS+Q++++PP S++  E+
Sbjct: 602  EILALSIAEVPEGRQRTPYLAVGCADSTVRIISLDPENTLDSLSLQALTAPPSSIVMAEI 661

Query: 643  -QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
              AS+       + A++F+N GL NGVL RTV+D +TG L D+R+RFLG RP KL  V V
Sbjct: 662  TDASID-----KYHATMFVNIGLNNGVLLRTVLDPLTGSLGDTRTRFLGSRPVKLARVPV 716

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
             G  A+L LSSRPWL Y +RG    TPL ++ L+YA SFS++ C EG++ + GN+LR+FT
Sbjct: 717  QGSPAILALSSRPWLNYAYRGILQFTPLIFDALDYAWSFSAELCPEGLIGIVGNSLRIFT 776

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
              RLG+   +T + L YTPR+ +  P  +L+  +E D    +     A +K         
Sbjct: 777  FPRLGQKVQQTVIDLSYTPRQLLTSPHSRLLYTVEADHRTFSPS---AIQKTI------- 826

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
               +  M +ME  ++    DP   +++G P+  + +W SC+RV+DP +A T   ++L+ N
Sbjct: 827  --SDMRMAEMEVDEEVLNLDP---KEFGLPRGPAGQWASCVRVIDPVTAETVFKVDLEQN 881

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            EAAFS   V FH   +   L VGT +     P R     Y+H Y+ +EEG+ LELLHKT+
Sbjct: 882  EAAFSAAIVTFHSHPNEVFLVVGTGQDTSLAP-RACKQAYLHTYKLLEEGRQLELLHKTE 940

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            V+ IP AL  FQGRL+AG+G  LRLYDLGKK+LLRK ENK F   I+++NT   RI VGD
Sbjct: 941  VDDIPKALIAFQGRLVAGVGKALRLYDLGKKKLLRKAENKGFATMIMTLNTQGTRIIVGD 1000

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
             QES ++  Y+  EN+L IFADD  PRW TA+  +D++T+A  DKFGN +  RLP+ VS 
Sbjct: 1001 AQESVYYALYKAPENRLLIFADDISPRWTTASIMVDYETVAAGDKFGNFFVNRLPKGVSS 1060

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            ++++DPTG  I  E+  L GAP++   +  +H+GD++TSL K +LV GG + ++Y  +MG
Sbjct: 1061 DVDDDPTGAGIMHEKPYLMGAPHRTHLLAHYHIGDIITSLHKVALVAGGRDLLVYTGLMG 1120

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++G ++ F S +DVDFF+ LEMH+R E P LCGR+H+AYRSAY PVK  +DGDLCE + +
Sbjct: 1121 TVGVLVPFVSNEDVDFFTTLEMHLRSEAPSLCGREHLAYRSAYTPVKATVDGDLCEVYRS 1180

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIR 1209
            L +  Q +IA EL+RT  E++KKL+ +R
Sbjct: 1181 LPMAKQGQIAGELERTVSEVIKKLDNVR 1208


>gi|395333071|gb|EJF65449.1| hypothetical protein DICSQDRAFT_178021 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1213

 Score = 1279 bits (3310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1227 (51%), Positives = 851/1227 (69%), Gaps = 38/1227 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT I  A+ GNFSG++T EIVV+RG  LELLRP+  SG++ T++++++FG
Sbjct: 1    MHLYNLTLQPPTAITHAVAGNFSGSRTQEIVVSRGTRLELLRPDVQSGKVATVIASDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY++VGSDSGRIVIL+Y+P  + F K+HQETFGKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGGTKDYVIVGSDSGRIVILDYDPKTSSFVKVHQETFGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHK++ I++ I G+D GF+NP
Sbjct: 121  LATDPKGRSVMIAAMEKAKLVYILNRDAAANLTISSPLEAHKNNAIIHHIVGLDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FAA+E+DYSE+DQD +G+A + A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  TFAALEVDYSESDQDPSGEAFNNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHR 290
            G        DGPSGVLVC E+ +IY++   P  R  IPRR       ERG++I +A  H+
Sbjct: 241  GQLATSDRYDGPSGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLEDPERGLIITAAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ+E GD++KVT+EH+ + V  LKIKYFDT+PV + +C+LKSG+LF ASEFG
Sbjct: 301  MKGAFFFLLQSEEGDLYKVTIEHEEQDVKALKIKYFDTVPVASGLCILKSGFLFVASEFG 360

Query: 351  NHALYQFQAIGADPDVEASSST------LMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            NH  YQFQ +G D +    SS       + +        +F+PR L NL  ++++ESL P
Sbjct: 361  NHYFYQFQKLGDDDNEPEFSSGDYPSYGMADPTAALPRAYFRPRALDNLTLVDELESLCP 420

Query: 405  IMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            I+D ++ NL    + PQIF  CGRG RS+ R LR GL V E+  S LPG+P+AVWT K  
Sbjct: 421  ILDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEEVVSSDLPGIPNAVWTTKLK 480

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D +D+YI++SF N TLVL IGET+EEV D+GFL + P+LAV  IG D+L+QVHP GIR
Sbjct: 481  EDDPYDSYIILSFVNGTLVLCIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHGIR 540

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSG 582
            H+  D R+NEWR P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M  
Sbjct: 541  HVLSDRRVNEWRVPSGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS 600

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV 642
             V  L IA VPEGR+R+ +LAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++   ++
Sbjct: 601  TVLALSIAEVPEGRQRTPYLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADM 660

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
               +        P + F+N GLQNGVL RTV+D V GQL+D+R+RFLG RP +L  V + 
Sbjct: 661  ---LDAGINKTQPTT-FVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIRLLRVNIQ 716

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
               A+L LSSRPWL Y H+     TPL +E L+YA SFS++ C EG++ ++G+ LR+F I
Sbjct: 717  RNPAILALSSRPWLNYTHQNFMHFTPLIFENLDYAWSFSAELCQEGLIGISGSLLRIFQI 776

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
             +LG    + ++PL YTPR+ +  P   L+ +IE D   ++    EAA K+  +   + E
Sbjct: 777  PKLGTKLKQDSIPLSYTPRKLIPHPHNGLLYLIEGDHRVMS---EEAAAKQLQQ---LRE 830

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
            +G    ++M N         L  EQ+G PKA +  W SCIR++ P  A T  ++ L +NE
Sbjct: 831  SGRAVDEEMVN---------LPPEQFGRPKAPAGTWASCIRIISPLDAQTVNVIHLDNNE 881

Query: 883  AAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
            AAFS+  V F  K +   L VGTA+   F   R+  +G++  YRF ++G++LELLHKT+ 
Sbjct: 882  AAFSLAIVPFAAKNNELHLVVGTAQD-TFLAPRSCTSGFLRTYRFTDDGRNLELLHKTET 940

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDI 1002
              +PLA+  FQG+L+AG+G  LRLYD+GKK+LLRK ENK   +TIV++NT   RI +GD+
Sbjct: 941  NDVPLAIMAFQGKLVAGVGKALRLYDIGKKKLLRKVENKTLGSTIVTLNTQGSRIIIGDM 1000

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
            QES  +  Y+  EN+L +FADD  PRW+TA   +D++T+  +D+FGN++  RL   +SD+
Sbjct: 1001 QESVFYAVYKPPENRLLVFADDVQPRWVTATTMLDYNTVVASDRFGNVFVNRLDAKISDQ 1060

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGS 1122
            I++DPTG  I  E+G L GAP+K   +  FH+GD+VTSL K SLV GG E ++Y  + G+
Sbjct: 1061 IDDDPTGAGILHEKGVLFGAPHKTAMLAHFHIGDIVTSLNKISLVAGGREVILYTCLHGT 1120

Query: 1123 LGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL 1182
            +G ++ F S++DVD  + LE HMR E   L GRDH+A+R  Y PVK V+DGDLCE F  L
Sbjct: 1121 IGILVPFVSKEDVDLLTTLEQHMRTEQLSLVGRDHLAWRGYYVPVKAVVDGDLCESFAKL 1180

Query: 1183 SLDLQRKIADELDRTPGEILKKLEEIR 1209
              + Q  IA ELDRT GE+LKKLE++R
Sbjct: 1181 PANKQSSIAGELDRTVGEVLKKLEQLR 1207


>gi|326511015|dbj|BAJ91855.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 706

 Score = 1278 bits (3308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/706 (84%), Positives = 661/706 (93%), Gaps = 3/706 (0%)

Query: 511  DDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG 570
            +DSLMQVHP+GIRHIREDGR+NEWRTPGK+TI KVGSNRLQVVIALSGGELIYFE+DMTG
Sbjct: 1    EDSLMQVHPNGIRHIREDGRVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTG 60

Query: 571  QLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSV 630
            QL+EVEK +MSGDVACL IA VPEGR+RSRFLAVGSYDNTIRILSLDPDDC+Q LSVQSV
Sbjct: 61   QLMEVEKQDMSGDVACLAIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSV 120

Query: 631  SSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLG 690
            SS PESLLFLEVQASVGGEDGAD+PA+LFLNAGLQNGVLFRT VDMVTGQLSD+RSRFLG
Sbjct: 121  SSAPESLLFLEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLG 180

Query: 691  LRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVV 750
            LRPPKLF  +V  R AMLCLSSRPWLGYIH+G FLLTPLS +TLE AASFSSDQC EGVV
Sbjct: 181  LRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVV 240

Query: 751  SVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAA 810
            +VAG+ALR+FTIERLGETFNET++PLRYTPR+FV+ PKKK + +IE+D+GA +AE+REAA
Sbjct: 241  AVAGDALRIFTIERLGETFNETSIPLRYTPRKFVILPKKKYLAVIESDKGAFSAEQREAA 300

Query: 811  KKECFEAAGMGENGNGNMDQMENGD---DENKYDPLSDEQYGYPKAESDKWVSCIRVLDP 867
            KKEC EAAG  ENGNGN DQMENGD   D  + + L DEQYGYPKAES+KWVSCIR+LDP
Sbjct: 301  KKECLEAAGSAENGNGNGDQMENGDGQEDGEESNTLPDEQYGYPKAESEKWVSCIRILDP 360

Query: 868  RSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRF 927
            RS +TTCLLELQDNEAA SICTVNFHDKEHGTLLAVGT KGLQFWPKR++ +G+IHIY+F
Sbjct: 361  RSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTTKGLQFWPKRSLASGFIHIYKF 420

Query: 928  VEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI 987
            V EGKSLELLHKTQVE +PL+LCQFQGRLLAG+G VLRLYDLGK++LLRKCENKLFP TI
Sbjct: 421  VNEGKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTI 480

Query: 988  VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKF 1047
            VSI+TYRDRIYVGD+QESFH+CKYRRDENQLYIFADDSVPRWLTAA+HIDFDTMAGADKF
Sbjct: 481  VSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKF 540

Query: 1048 GNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV 1107
            GNIYF RLPQD+SDEIEEDPTGGKIKWEQGKLNGAPNK+EEIVQFHVGDVVT LQKASL+
Sbjct: 541  GNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLI 600

Query: 1108 PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPV 1167
            PGGGE +IYGTVMGS+GA+LAF+SR+DVDFFSHLEMH+RQEHPPLCGRDHMAYRSAYFPV
Sbjct: 601  PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPV 660

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            KDVIDGDLCEQ+P+L  D+QRKIADELDRTPGEILKKLE+IRNKI+
Sbjct: 661  KDVIDGDLCEQYPSLPADMQRKIADELDRTPGEILKKLEDIRNKII 706


>gi|402222132|gb|EJU02199.1| hypothetical protein DACRYDRAFT_21931 [Dacryopinax sp. DJM-731 SS1]
          Length = 1209

 Score = 1278 bits (3306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1225 (51%), Positives = 858/1225 (70%), Gaps = 38/1225 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT I  AI GNFSG +  EI+V+RG  LELL+P+ N+G++ T+++ ++FG
Sbjct: 1    MHLYNLTLQPPTAITQAIVGNFSGVRAQEIIVSRGTRLELLKPDPNTGKVSTVLTHDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDY +VGSDSGR+VILEY+P  N F K+HQET+GKSG RRIVPGQY
Sbjct: 61   TIRSLVAFRLTGGAKDYAIVGSDSGRLVILEYDPQANAFTKLHQETYGKSGVRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHK+H I++SI G+D GF+NP
Sbjct: 121  LAVDPKGRSVMIAALEKAKLVYILNRDAAANLTISSPLEAHKNHGIIHSIVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+E+DQDSTG+A  + +K LT+YELDLGLNHV RKWSEP D  AN+L+ VPG
Sbjct: 181  LFAALEVDYTESDQDSTGEAYEKTEKMLTYYELDLGLNHVVRKWSEPTDKRANLLLQVPG 240

Query: 240  G-------GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAER--GVLIVSAATHR 290
            G        DGPSGVL+C E ++I+++      R  IP+R     ER    +IV+A  H+
Sbjct: 241  GQTSSEARHDGPSGVLICCEGYIIWRHMDTVQHRVPIPKRRHPLDERTRDSIIVAAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ+E GD+FKVT++H++E V  +KIKYFDT+PV +S+C+LKSG+LF ASEFG
Sbjct: 301  MKGAFFFLLQSEDGDLFKVTIDHEDEEVKTMKIKYFDTVPVASSLCILKSGFLFVASEFG 360

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEGF-QPV---FFQPRGLKNLVRIEQVESLMPIM 406
            NH LYQFQ +G D D E   S++   + G   P+   +F+PR L+NLV  +++ S  PI+
Sbjct: 361  NHYLYQFQKLGDDDD-EIEYSSVSYPDNGMADPIPQAYFRPRPLENLVLADELNSFDPIV 419

Query: 407  DMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
            D ++ NL   + PQIF  CGRG RSS R+LR GL V E   S+LPG+P+AVWTVK   +D
Sbjct: 420  DAKVTNLLNTDTPQIFAACGRGARSSFRMLRHGLDVEETVSSELPGIPNAVWTVKLKADD 479

Query: 467  EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
            ++DAYI++SF N TLVLSIGET+EEVSD+GFL ++P++AV  IG+DSL+QV+P GIRH+ 
Sbjct: 480  QYDAYIILSFVNGTLVLSIGETIEEVSDTGFLSSSPTIAVQQIGEDSLLQVYPHGIRHVL 539

Query: 527  EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSGDVA 585
             D R+NEWR P   TIV   +N  QV IALS  +L+YFE+D+ GQL E + +  +   V 
Sbjct: 540  SDRRVNEWRCPQHTTIVAATTNSRQVAIALSSAQLVYFELDLEGQLNEYQDRKSLGSGVL 599

Query: 586  CLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQ-A 644
             + IA VPEGR+R+ +LAVG  D T+RI+SLDPD  ++ +S+Q++++PP S+   E+  A
Sbjct: 600  AMSIAEVPEGRQRTPYLAVGCEDQTVRIISLDPDTTLENISLQALTAPPSSICVAEIMDA 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S+      + P ++F+N GLQNGVL RTV+D V GQL+D+R+RFLG RP +L  V V G 
Sbjct: 660  SID----KNQP-TMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGSRPVRLIRVNVHGL 714

Query: 705  AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
             ++L LSSR WL Y ++     TPL ++ LEYA SFS++ C +G++ ++GN LR+F +  
Sbjct: 715  PSILALSSRSWLNYTYQNLLHFTPLIFDPLEYAWSFSAELCPDGLIGISGNVLRIFQVPN 774

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
            LG+   +  +PL YTPR+ +  P ++L  +IE+D   L+ E   AA K+  +    G+  
Sbjct: 775  LGQKLKQDVIPLSYTPRKMLQHPTERLFYVIESDHRVLSPE---AADKKLQKLKSTGQR- 830

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
               +DQ        +   L  + +G P+A++  W SCI+++DP +  +   + L +NEAA
Sbjct: 831  ---LDQ--------EVIDLPADIFGRPRADAGTWASCIQIIDPANVRSVLEVPLDNNEAA 879

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            FS+    F  +     L VGTA+ +   PK +  +G++  Y+  E+G+SLE LHKT+V+ 
Sbjct: 880  FSLAITTFIARPGELFLVVGTAQDVIVSPK-SCKSGFLRTYKISEDGRSLEFLHKTEVDD 938

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            +PLAL  FQGRL+AGIG  LR++D+GKKRLLRKCENK F   IV+++T   RI VGD+ E
Sbjct: 939  VPLALLSFQGRLVAGIGKALRIFDMGKKRLLRKCENKSFATAIVTLSTQGSRIIVGDMAE 998

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S +F  Y+  EN+L IFADDS PRW+TA+  +D+DT+   DKFGN++  RLP  V ++++
Sbjct: 999  SIYFATYKPPENRLLIFADDSQPRWITASAMVDYDTVCAGDKFGNVFVNRLPPKVGEQVD 1058

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            EDPTG  +  E+G   GAP+K   +  ++VGD++TS+ K +LV GG + V+Y  + G++G
Sbjct: 1059 EDPTGAGVLHEKGLFMGAPHKTNMLAHYYVGDIITSMHKVALVTGGRDIVLYTGLHGTIG 1118

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F S++DVDF   LE HMR E P L GRDH+ YR  Y PVK V+DGDLCE F  L  
Sbjct: 1119 VLIPFISKEDVDFIRTLEQHMRTEAPSLVGRDHLTYRGYYVPVKGVVDGDLCELFSLLPT 1178

Query: 1185 DLQRKIADELDRTPGEILKKLEEIR 1209
              Q+ IA ELDRT  E+LKKLE++R
Sbjct: 1179 QKQQSIAGELDRTYSEVLKKLEQLR 1203


>gi|302680006|ref|XP_003029685.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
 gi|300103375|gb|EFI94782.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
          Length = 1213

 Score = 1276 bits (3303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1233 (51%), Positives = 848/1233 (68%), Gaps = 48/1233 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT  + A+ GNFSG +T EIV+  G  LELLRP+  +G++ T+++T++FG
Sbjct: 1    MHLYNLTLQPPTAAVQAVVGNFSGARTQEIVICHGPRLELLRPDVQTGKLTTVIATDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRS+A FRLTG  KD++++GSDSGRIVIL+Y+P    F K+HQET+GKSG RRIVPGQY
Sbjct: 61   SIRSIAAFRLTGGTKDHLILGSDSGRIVILDYDPKSTSFVKLHQETYGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRAVMIGA EK KLVY+LNRD AA LTISSPLEAHK+  I++ I G+D GF+NP
Sbjct: 121  LATDPKGRAVMIGAMEKSKLVYILNRDAAANLTISSPLEAHKNSAIIHHIVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DYSE+DQD TG+A + A K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  IFAALEVDYSESDQDPTGEAFNNAAKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHR 290
            G        DGPSGVL+C E+ +IY++   P  R  IPRR       ERG++IV+A  H+
Sbjct: 241  GQLASSDRFDGPSGVLICCEDHIIYRHMDAPQHRVPIPRRKHPLEDPERGIIIVAAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ+E GD+FKVT+EH++E V E+KIKYFDT+PV +++C+LKSG+LF ASEFG
Sbjct: 301  MKGAFFFLLQSEDGDLFKVTIEHEDEDVKEVKIKYFDTVPVASALCILKSGFLFVASEFG 360

Query: 351  NHALYQFQAIGADPD-VEASSST-----LMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            NH LYQFQ +G D D  E SSS+     + ++      V F+P  L NL   ++VESL P
Sbjct: 361  NHYLYQFQKLGDDDDEPEFSSSSYPQFGMADSSMPLPHVHFKPHPLDNLALADEVESLDP 420

Query: 405  IMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            I+D ++ NL    + PQIF  CGRGPRSSLR LR GL V E   S LPG+P+AVWT KK 
Sbjct: 421  IIDSKVLNLMPNSDTPQIFAACGRGPRSSLRTLRHGLEVEESVSSDLPGIPNAVWTTKKK 480

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D FD+YI++SF N TLVLSIGET+EEV D+GFL + P+LAV  IG D+L+QVHP GIR
Sbjct: 481  EDDAFDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPQGIR 540

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSG 582
            H+  D R+NEWR P  ++IV+  +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M  
Sbjct: 541  HVLSDRRVNEWRVPQGKSIVQATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS 600

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV 642
             V  L I  VPEGR+R+ FLAVG  D T+RI+SLDP+  +  +S+Q++++PP S+   E+
Sbjct: 601  TVLALSIGEVPEGRQRTPFLAVGCEDQTVRIISLDPESTLDTISLQALTAPPSSICIAEM 660

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
               +       HP ++F+N GLQNGVL RTV+D +TGQL+D+R+RFLG RP KL  V + 
Sbjct: 661  ---LDAAINKTHP-TMFVNIGLQNGVLLRTVLDPMTGQLTDTRTRFLGTRPVKLVRVAIQ 716

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
               A++ LSSR WL Y H+     TPL +E L++A SFS++   EG++ + G+ LR+F I
Sbjct: 717  RNPAIMALSSRSWLNYTHQNMVHFTPLIFENLDFAWSFSAELSPEGLIGITGSVLRIFQI 776

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQ---GALTAEEREAAKKECFEAAG 819
             +LG    + +LPL YTPR+F+  P      +IE+D    G  TA E+            
Sbjct: 777  PKLGVKLKQDSLPLSYTPRKFITHPNNHYFYMIESDHRVYGDETAREK------------ 824

Query: 820  MGENGNGNMDQMENGD--DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
                    +DQM  G   DE+  + L   ++G  KA +  W SCIR++DP   +T  ++ 
Sbjct: 825  -------ILDQMSRGKAVDEDVVN-LPVTEFGRVKAPAGTWGSCIRIIDPTQNSTVAVIP 876

Query: 878  LQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELL 937
            L +NEAAFSI  V F  +     L VGTA   +  P R   +GY+  Y+F  +G  LEL 
Sbjct: 877  LDNNEAAFSIAVVPFSARNGELFLVVGTAANTRVSP-RTCSSGYLRTYQFTNDGAGLELH 935

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRI 997
            HKT+ + +PLAL  FQGRL AG+G  LR+YD+GKK+LLRK ENK F  TIV++NT   RI
Sbjct: 936  HKTETDDVPLALLAFQGRLAAGVGKALRIYDIGKKKLLRKAENKGFGTTIVTLNTQGSRI 995

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
              GD+QES  +  Y+  EN+L +FADDS PRW++AA  +D+ T+A  D+FGN++  RL  
Sbjct: 996  IAGDMQESLFYAVYKAPENRLLVFADDSQPRWISAATMVDYYTVAAGDRFGNVFVNRLDY 1055

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYG 1117
             VS+++++DPTG  I  E+G L GAP+K + +  FHVGD++TS+ K +LV GG E ++Y 
Sbjct: 1056 KVSEQVDDDPTGAGILHEKGILMGAPHKTKLLCHFHVGDLITSIHKVALVAGGREVLLYT 1115

Query: 1118 TVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCE 1177
             + G++G ++ F S++DVDF S LE HMR E   L GRDH+++R  Y PVK V+DGDLCE
Sbjct: 1116 GLHGTIGMLVPFVSKEDVDFISTLEQHMRSEQSSLVGRDHLSWRGYYVPVKAVVDGDLCE 1175

Query: 1178 QFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
             F  L    Q  IA+ELDRT GE+LKKL+ +R 
Sbjct: 1176 TFAKLPASKQSAIANELDRTVGEVLKKLDSLRT 1208


>gi|449546293|gb|EMD37262.1| hypothetical protein CERSUDRAFT_83017 [Ceriporiopsis subvermispora B]
          Length = 1213

 Score = 1276 bits (3303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1228 (51%), Positives = 850/1228 (69%), Gaps = 40/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT I  A+ GNFSG++  EIVV+RG  LELLRP+  SG+I T+V++++FG
Sbjct: 1    MHLYNLTLQPPTAITHAVAGNFSGSRQQEIVVSRGTRLELLRPDPQSGKIFTVVASDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY +VGSDSGRIVILEY P  + F K+HQETFGKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGGTKDYAIVGSDSGRIVILEYEPKTSSFTKVHQETFGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHK++ I++ I G+D GFDNP
Sbjct: 121  LATDPKGRSVMIAAVEKAKLVYILNRDAAANLTISSPLEAHKNNAIIHHIVGLDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+D SE+DQD TG+A + A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  MFAALEVDNSESDQDPTGEAFNNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD--LPAERGVLIVSAATHR 290
            G        DGPSGVLVC E+ +IY++   P  R  IPRR      A+RG++I +A  H+
Sbjct: 241  GQLAASDRYDGPSGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLQDADRGLIITAAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ+E GD++KVT++H+ + V  LKIKYFDT+PV +S+C+LKSG+LF ASEFG
Sbjct: 301  MKGAFFFLLQSEEGDLYKVTIDHEEQDVKALKIKYFDTVPVASSLCILKSGFLFVASEFG 360

Query: 351  NHALYQFQAIGAD---PDVEASSST---LMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            NH LYQFQ +G D   P+  ++S     + +      PV+F+PR L NL  ++++ESL P
Sbjct: 361  NHYLYQFQKLGDDDFEPEFSSASYPSFGMADPSIPLPPVYFRPRALDNLTLVDEMESLSP 420

Query: 405  IMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            ++D ++ NL    + PQIFT CGRGPRSS R+LR GL V E+  S LPG+P+AVWT K  
Sbjct: 421  VVDSKVMNLLPNSDTPQIFTACGRGPRSSFRMLRHGLDVEEVVSSDLPGIPNAVWTTKLK 480

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D +D+YI++SF N TLVL IGET+EEV D+GFL + P+LAV  IG D+L+QVHP GIR
Sbjct: 481  EDDPYDSYIILSFVNGTLVLCIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHGIR 540

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSG 582
            H+  D R+NEWR P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M  
Sbjct: 541  HVLADKRVNEWRVPQGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS 600

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE- 641
             V  L IA VPEGR+R+ +LAVG  D T+RI+SLDP+  +  +S+Q++++PP ++   + 
Sbjct: 601  TVLALSIAEVPEGRQRTPYLAVGCEDQTVRIISLDPESTLDTISLQALTAPPSAICIADM 660

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            + A +          + F+N GLQNGVL RTV+D + GQL+D+R+RFLG RP KL  V+V
Sbjct: 661  LDAGINKTQ-----QTTFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLIRVLV 715

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
                 +L LSSRPWL Y H+     TPL +E L+YA SFS++ C EG++ ++G+ LR+F 
Sbjct: 716  QRNPGILALSSRPWLNYTHQNLMHFTPLIFENLDYAWSFSAELCPEGLIGISGSVLRIFH 775

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I +LG    + A+PL YTPR+F+  P   L+ +IE D   +     +AA ++  E    G
Sbjct: 776  IPKLGTKLKQDAIPLLYTPRKFIPHPTNSLLYMIEGDHRVMG---EDAAARKLDELRQKG 832

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
               +  + Q            L  E +G PKA +  W SCIR+++P  A T  ++ L +N
Sbjct: 833  REIDDEVVQ------------LPPELFGRPKAPAGTWASCIRIINPVDAKTVNVIHLDNN 880

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            E AFS+  V F  +     L VGTA+   F   R+  +G++  YRF ++G++LELLHKT+
Sbjct: 881  EMAFSLAVVPFAARGGELHLVVGTAQD-TFLTPRSCTSGFLRTYRFSDDGQNLELLHKTE 939

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
               +PLA+  FQG+L+AG+G  LR+YD+GKK+LLRK ENK F   IV+++T    IYVGD
Sbjct: 940  TNDVPLAVMAFQGKLVAGVGKSLRIYDMGKKKLLRKVENKTFSAAIVALHTQGSHIYVGD 999

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  +  Y+  EN+L +FADD+ PRW+TA   ID++T+A AD+FGN++  RL   VS+
Sbjct: 1000 MQESVFYAVYKAPENRLLVFADDTQPRWITAMTMIDYNTVAAADRFGNVFVNRLDPKVSE 1059

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            ++++DPTG  I  E+  L GAP+K   +  FHVGD++TS+ K +LV GG E ++Y  + G
Sbjct: 1060 QVDDDPTGAGILHEKSILFGAPHKTSMLAHFHVGDLITSINKVALVAGGREVLLYTGLHG 1119

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++G ++ F S++DVDF S LE HMR E   L GRDH+ +R  Y PVK V+DGDLCE F  
Sbjct: 1120 TIGILMPFVSKEDVDFISTLEQHMRTEQLSLVGRDHLTWRGYYVPVKAVVDGDLCETFAR 1179

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIR 1209
            L    Q  IA ELDRT GE+LKKLE++R
Sbjct: 1180 LPASKQSAIAGELDRTVGEVLKKLEQLR 1207


>gi|392570042|gb|EIW63215.1| hypothetical protein TRAVEDRAFT_161375 [Trametes versicolor FP-101664
            SS1]
          Length = 1213

 Score = 1276 bits (3302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1228 (51%), Positives = 855/1228 (69%), Gaps = 40/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT I  A+ GNFSG++  EI+V+RG  LELLRP+  SG++ T+++TE+FG
Sbjct: 1    MHLYNLTLQPPTAITHAVAGNFSGSRAQEIIVSRGTRLELLRPDAQSGKVLTVIATEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY++VGSDSGRIVIL+Y+P  + F KIHQET+GKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGGTKDYVIVGSDSGRIVILDYDPRTSTFVKIHQETYGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMIG+ EK KLVY+LNRD AA LTISSPLEAHK++ I++ I G+D GF+NP
Sbjct: 121  LATDPKGRSVMIGSVEKAKLVYILNRDAAANLTISSPLEAHKNNAIIHHIVGLDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FAA+E+DYSE+DQD TG+A + A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  TFAALEVDYSESDQDPTGEAFNNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHR 290
            G        DGPSGVLVC E+ +IY++   P  R  IPRR       ERG++I +A  H+
Sbjct: 241  GQLAASERYDGPSGVLVCCEDHIIYRHMDSPQHRVPIPRRKHPLEDTERGLIITAAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ+E GD++KVT+EH+ + V  +KIKYFDT+PV +S+C+LKSG+LF ASEFG
Sbjct: 301  MKGAFFFLLQSEEGDLYKVTIEHEEQDVKAVKIKYFDTVPVASSLCILKSGFLFVASEFG 360

Query: 351  NHALYQFQAIGAD---PDVEASSSTLMETEEGFQPV---FFQPRGLKNLVRIEQVESLMP 404
            NH  YQFQ +G D   P+  ++        +   P+   +F+PR L NL  ++++ESL P
Sbjct: 361  NHYFYQFQKLGDDDNEPEWSSADYPSYGMADPSTPLPRGYFRPRALDNLTLVDELESLCP 420

Query: 405  IMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            I+D ++ NL    + PQIFT CGRG RS+ R LR GL V E+  S LPG+P+AVWT K  
Sbjct: 421  IIDSKVMNLLPNSDTPQIFTACGRGARSTFRTLRHGLEVEEVVSSDLPGIPNAVWTTKLK 480

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D +D+YI++SF N TLVLSIGET+EEV D+GFL + P+LAV  IG D+L+QV+P GIR
Sbjct: 481  EDDLYDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVYPHGIR 540

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSG 582
            H+  D R+NEW+ P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M  
Sbjct: 541  HVLADRRVNEWKVPSGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS 600

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE- 641
             V  L +A VPEGR+R+ +LAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++   + 
Sbjct: 601  TVLALSVAEVPEGRQRTPYLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADM 660

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            + AS+          + F+N GLQNGVL RTV+D V GQL+D+R+RFLG RP +L  V +
Sbjct: 661  LDASINKSQ-----PTTFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIRLLRVNI 715

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
                A+L LSSRPWL Y ++     TPL +E L+YA SFS++ C EG++ ++G+ LR+F 
Sbjct: 716  QQNPAILALSSRPWLNYTYQNFMHFTPLIFENLDYAWSFSAELCTEGLIGISGSLLRIFQ 775

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I +LG    + +LPL YTPR+F+  P   L+ +IE D   ++    EAA K+  E    G
Sbjct: 776  IPKLGTKLKQDSLPLSYTPRKFMPHPTNGLLYLIEGDHRVMS---EEAASKKLQEMRARG 832

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
            E            D+E    P   EQ+G PKA +  W SCIR+++P  ++T  ++ L +N
Sbjct: 833  ERI----------DEEVLLLP--PEQFGRPKAPAGTWASCIRIINPLESSTVKVIHLDNN 880

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            EAAFS+  V F  + +   L VGTA+   F   R+  +G++  YRF+++G+ LE LHKT+
Sbjct: 881  EAAFSMAIVPFAARGNELHLVVGTAQD-TFLSPRSCTSGFLRTYRFIDDGRDLEFLHKTE 939

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
               +PLA+  FQG+L+AG+G  LRLYD+GKK+LLRK ENK FP  IV++NT   RI VGD
Sbjct: 940  TSDVPLAVMAFQGKLIAGVGKSLRLYDVGKKKLLRKVENKGFPAAIVTLNTQGSRIIVGD 999

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  +  Y+  EN+L +FADD+ PRW+TA   +D++T+   D+FGN++  RL   +SD
Sbjct: 1000 MQESVFYAVYKAPENRLLVFADDAQPRWVTATTMLDYNTVVAGDRFGNVFVNRLDSKISD 1059

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            +I++DPTG  I  E+G L GAP+K   +  FHVGD+VTSL K +LV GG E ++Y  + G
Sbjct: 1060 QIDDDPTGAGILHEKGVLFGAPHKSVMLSHFHVGDIVTSLHKVALVAGGREVLLYTCLHG 1119

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++G ++ F S++DVD  + LE HMR E   L GRDH+ +R  Y PVK V+DGDLCE F  
Sbjct: 1120 TIGILVPFVSKEDVDLLTTLEQHMRTEQLSLVGRDHLTWRGYYVPVKSVVDGDLCESFAK 1179

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIR 1209
            L  + Q  IA ELDRT GE+LKKLE++R
Sbjct: 1180 LPANKQSTIAGELDRTVGEVLKKLEQLR 1207


>gi|409075182|gb|EKM75565.1| hypothetical protein AGABI1DRAFT_64324 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1213

 Score = 1274 bits (3298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1228 (51%), Positives = 853/1228 (69%), Gaps = 40/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT  + A+ GNFSG +  EI+V+ G  LELLRP+  +G++ T+++T++FG
Sbjct: 1    MHLYNLTLQPPTAALQAVVGNFSGARQQEIIVSHGTRLELLRPDPQTGKVVTVIATDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG+ KDY ++GSDSGRI+ILEY+   + F K+HQETFGKSG RRIVPGQY
Sbjct: 61   SIRSLASFRLTGATKDYAILGSDSGRIIILEYDAKTSSFAKLHQETFGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHK+ +I++ I G+D GF+NP
Sbjct: 121  LATDPKGRSVMIAAMEKAKLVYILNRDAAANLTISSPLEAHKNSSIIHHIVGLDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            ++AA+E+DYSE+DQD TG+A   A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  VYAALEVDYSESDQDPTGEAFKRAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHR 290
            G        DGPSGVLVC E+ +IY++   P  R  IPRR       ERGV+I SA  H+
Sbjct: 241  GQLASSDRFDGPSGVLVCCEDHIIYRHMDSPQHRVPIPRRQHPLEDKERGVIITSAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ+E GD+FKVT+EH++E V  LKIKYFDT+PV +S+C+LKSG+LF ASEFG
Sbjct: 301  MKGAFFFLLQSEDGDLFKVTIEHEDEEVKALKIKYFDTVPVASSLCILKSGFLFVASEFG 360

Query: 351  NHALYQFQAIGAD---PDVEASS---STLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            NH LYQFQ +G D   P+  ++S   S + E +     V+F+PR L NL   +++ESL P
Sbjct: 361  NHYLYQFQKLGDDDEEPEFSSTSFPSSGMAEPQAALPRVYFKPRPLDNLALADELESLDP 420

Query: 405  IMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            I+D ++ NL    + PQIF  CGRG RSSLR L+ GL V E   S LPG+P+AVWT K+N
Sbjct: 421  IIDSKVLNLLPNSDTPQIFAACGRGARSSLRTLQHGLEVEESVSSDLPGIPNAVWTTKRN 480

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D +D+YI++SF N TLVLSIGET+EEV D+GFL + P+LAV  IG D+L+QVHP GIR
Sbjct: 481  EDDPYDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPHGIR 540

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSG 582
            H+  D R+NEWR P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M  
Sbjct: 541  HVLADRRVNEWRVPSNKTIVAATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS 600

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE- 641
             V  L I  VPEGR+R+ +LAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++   + 
Sbjct: 601  TVLALSIGDVPEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSAICIADM 660

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            + AS+          ++F+N GLQNGVL RTV+D + GQL+D+R+RFLG RP KL  V++
Sbjct: 661  LDASINKAQ-----PTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVLI 715

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
                A+L LSSR WL Y ++     TPL YE L+YA SFS++   EG++ ++G+ LR+F 
Sbjct: 716  HKHPAILALSSRSWLNYTYQNFMHFTPLIYENLDYAWSFSAELSPEGLIGISGSVLRIFH 775

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            + RLG    + ++PL YTPR+F+  P   L  +IE D   +    ++A  K+  E     
Sbjct: 776  VPRLGIKLKQDSIPLSYTPRKFITYPLNNLFYLIEGDHRVMG---QDAVDKKLNE----- 827

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
                  + Q     D+   + LS E +G PKA +  W S IR++DP    T  ++ L  N
Sbjct: 828  ------LRQQNRAIDQEVLN-LSPEVFGRPKAANGTWASNIRIIDPVEGKTISVVPLDGN 880

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            E+AFS+  V F  K +   L VGTA   +  P R    G++ +Y+F+E+G+ LEL+HKT+
Sbjct: 881  ESAFSLAVVPFSAKGNELHLVVGTAADTKLSP-RTCSTGFLRVYKFLEDGRQLELVHKTE 939

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            ++ +PLAL  FQGRL+AG+G  LR+YD+GKK++LRK ENK F + IV+++T   RI VGD
Sbjct: 940  IDDVPLALMAFQGRLVAGVGKALRIYDIGKKKMLRKVENKQFGSAIVTLSTQGSRILVGD 999

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  F  Y+  EN+L IFADDS PRW++AA  +D++T+  AD+FGNI+  RL   VSD
Sbjct: 1000 MQESIFFAVYKAPENRLLIFADDSQPRWISAATMVDYNTVVAADRFGNIFVNRLDPRVSD 1059

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            +++EDPTG  I  E+G   GAP+K + I  FHVGD++TS+ K SLV GG E ++Y  + G
Sbjct: 1060 QVDEDPTGAGILHEKGLYMGAPHKTKMICHFHVGDLITSIHKVSLVAGGREVLLYTGLHG 1119

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++G ++ F +++DVDF S LE HMR E   L GRDH+ +R  Y PVK V+DGDLCE +  
Sbjct: 1120 TIGILVPFVTKEDVDFISTLEQHMRTEQVSLVGRDHLGWRGYYVPVKAVVDGDLCEMYAK 1179

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIR 1209
            L    Q  IA ELDR+ GE+LKKLE++R
Sbjct: 1180 LPGSKQSAIAGELDRSIGEVLKKLEQLR 1207


>gi|430813298|emb|CCJ29330.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 1197

 Score = 1274 bits (3297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1219 (50%), Positives = 853/1219 (69%), Gaps = 38/1219 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLTL  P+GI A++ G FSG K  EI+VARG  LELL+P+ N G+I++L+S ++ G
Sbjct: 8    MFLYSLTLLPPSGISASVVGQFSGQKQQEIIVARGSRLELLKPDPNLGKIKSLLSHDVHG 67

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+L  FRL G+ KD+++VGSDSGRI ILEY P  N F K+HQET+GKSG RR+VPGQY
Sbjct: 68   IIRTLVGFRLAGTNKDHLIVGSDSGRITILEYKPDSNAFSKVHQETYGKSGVRRVVPGQY 127

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA MI + EK KLVYVLNRD+A  LTISSPLEAHKS ++V+ + G+D G++NP
Sbjct: 128  LAVDPKGRATMIASIEKNKLVYVLNRDSATNLTISSPLEAHKSCSLVFHLIGMDVGYENP 187

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+EA+ D +G+A  E QK LT+YELDLGLNHV RKWS+PVD  AN+LVTVPG
Sbjct: 188  VFAALEVDYTEAESDPSGKAYREIQKVLTYYELDLGLNHVVRKWSDPVDRKANLLVTVPG 247

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLFFF 297
            G DGPSG LVC E  + YK++G    R  IP R      +++  +IVS+  H+ +  FFF
Sbjct: 248  GSDGPSGALVCTEGSIFYKHKGKKTHRIPIPTRIGSLENSQKKQIIVSSVVHKMRGAFFF 307

Query: 298  LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            LLQ E GD+FKVT++ ++  V  LKIKYFDT+PV+  + +LKSG+LF ASE+GNH LYQF
Sbjct: 308  LLQNEDGDLFKVTIDSNDGEVESLKIKYFDTVPVSTGLSILKSGFLFVASEYGNHHLYQF 367

Query: 358  QAIGADPD-VEASSST--LMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
            + +G D + +E SS    +++  EG++P +F+PR L+NL+ ++ + S+ P+MD +I NL 
Sbjct: 368  EKLGDDNNEIEFSSVDFPVLDLNEGYEPSYFRPRSLENLLLVDDLNSMNPLMDSKILNLT 427

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
            +E+APQI+ LCGRGPRS+ R LR GL V+E+  S LPG P+AVWT K   +D++DAYIV+
Sbjct: 428  DEDAPQIYALCGRGPRSTFRTLRYGLEVNEIVASGLPGSPTAVWTTKLTSSDQYDAYIVL 487

Query: 475  SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEW 534
            SF N TLVLSIGETVEEVSD+GFL ++P+LAV  +GDD+L+QVHP GIRHI+ D R+NEW
Sbjct: 488  SFVNGTLVLSIGETVEEVSDTGFLSSSPTLAVQQLGDDALIQVHPKGIRHIQADKRVNEW 547

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSGDVACLDIASVP 593
            +TP  R+IV+V +N+ QVV+ALS GE++YFE+D  G L E + + +M+G V  L I  VP
Sbjct: 548  KTPQHRSIVQVTTNQRQVVVALSNGEIVYFELDDEGNLNEYQDRKQMTGSVTSLSIGHVP 607

Query: 594  EGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGAD 653
            EGR+R  FLAVG  D+T+RI+SL+P++ ++ LSVQ++++PP SL  + ++      DG  
Sbjct: 608  EGRQRHPFLAVGCDDSTVRIISLEPENTLESLSVQALTAPPNSLCIMSMK------DG-- 659

Query: 654  HPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
            +  + +L+ GL NGV  R+V+++ TGQL D+R+RFLG RP KLFSV +  + +++ LSSR
Sbjct: 660  NIETFYLHIGLFNGVYLRSVLELSTGQLKDTRTRFLGSRPVKLFSVTIQNQLSVIALSSR 719

Query: 714  PWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETA 773
            PWL YI      L PL Y++LEY   FSS+QC EG+V + G  L++F +ERL     + +
Sbjct: 720  PWLSYIINASLHLVPLIYDSLEYCWGFSSEQCSEGIVGIQGQDLKIFMVERLDNVLKQDS 779

Query: 774  LPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN 833
            + L YTPRRF+  P + +  IIE+D   L   ER+                   ++ ++N
Sbjct: 780  ISLMYTPRRFIKHPDEHIFYIIESDHNVLPLSERQK-----------------RVEGLQN 822

Query: 834  GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFH 893
            GD       L  E  G P+  S  W SCI +LDP S      +EL DNEAAFSI  V F 
Sbjct: 823  GD-----HILLPEDIGLPRGLSGNWASCITILDPLSKKILTRIELDDNEAAFSIAMVTFK 877

Query: 894  DKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQ 953
            ++     LA+G+ K +   PK +  A YI IYRF+++GKS+EL+HKT+V+ IPLAL  FQ
Sbjct: 878  NQNDEIFLAIGSGKNVILAPK-SFSAAYISIYRFIDQGKSIELVHKTEVDDIPLALLGFQ 936

Query: 954  GRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRR 1013
            GRLLAG+G +LR+Y++G K+ LRKCE +  PN IV ++T   RI + DIQES HF  Y+ 
Sbjct: 937  GRLLAGLGKMLRIYEMGMKKCLRKCEVRAVPNCIVQLHTQGSRIIIADIQESIHFAVYKY 996

Query: 1014 DENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIK 1073
             EN+L +FADD +PRW T +  +D++T+A  DKFGN +  R P +VS+  +EDP+G ++ 
Sbjct: 997  LENRLIVFADDVIPRWTTTSTMLDYETVAAGDKFGNFWINRCPLEVSESADEDPSGAQLI 1056

Query: 1074 WEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRD 1133
             E+  L GA  +++ +  F++GD  TS+ K  L+ GG + ++Y  +MGS+G  L F  R+
Sbjct: 1057 HEKSYLFGAAKRLKMLAHFYIGDTFTSMHKVQLIAGGRDIIVYTGMMGSIGIFLPFVGRE 1116

Query: 1134 DVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADE 1193
            DVDFF  LE  MR E   L GRDH+ YR  Y PVK V+DGDLCE+F  L  + ++ IA+E
Sbjct: 1117 DVDFFQQLEALMRTEDLSLIGRDHLMYRGYYVPVKSVVDGDLCERFLMLPYNKKQVIANE 1176

Query: 1194 LDRTPGEILKKLEEIRNKI 1212
            LDR   EI KK+E++R ++
Sbjct: 1177 LDREISEIAKKIEDMRVRV 1195


>gi|330790247|ref|XP_003283209.1| CPSF domain-containing protein [Dictyostelium purpureum]
 gi|325086890|gb|EGC40273.1| CPSF domain-containing protein [Dictyostelium purpureum]
          Length = 1233

 Score = 1273 bits (3293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1236 (50%), Positives = 890/1236 (72%), Gaps = 31/1236 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLY+LTLQ+PT +  +I GNFSGTK  EIV+  G+ LE++R +  G++ +++ +E+FG 
Sbjct: 1    MYLYNLTLQRPTAVYQSICGNFSGTKQIEIVLNHGRSLEMIRYDEDGKMSSVLYSEVFGV 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRS+  FRLT   KDYIVVGSDSGR+VILEYN +KN FDK+HQETFG+SGCRRIVPGQYL
Sbjct: 61   IRSIIPFRLTSGSKDYIVVGSDSGRVVILEYNSTKNQFDKVHQETFGRSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRA MIGA EKQKLVY+LNRD++A+LTISSPLEAHKS TI++S+CG+D GF+NPI
Sbjct: 121  AVDPKGRAFMIGAIEKQKLVYILNRDSSAKLTISSPLEAHKSSTIIFSMCGVDVGFENPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKN-----LTFYELDLGLNHVSRKWSEPVDNGANMLV 235
            FA I +DYS+   DS G    + + N     LTFYELDLGLN+V RKWS+ +D+ AN+++
Sbjct: 181  FATISVDYSD---DSGGNIEEDLEDNGKKKVLTFYELDLGLNNVVRKWSDQIDDTANIVM 237

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLF 295
            TVPG  +GP GVLV +E++++Y+NQ HP++RA IPRR +   ++G+LIVS ++H+QK +F
Sbjct: 238  TVPGSNEGPGGVLVTSEDYIVYRNQDHPEIRAKIPRRYNSNPDKGLLIVSYSSHKQKNMF 297

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+Q+E+GD++K+TL+   E V+ + I YFDTIP+  S+ VLK+G+LFAASEFG+H+LY
Sbjct: 298  FFLVQSEFGDLYKITLDFKGEMVTAVNISYFDTIPLANSLTVLKNGFLFAASEFGDHSLY 357

Query: 356  QFQAIGADPDVEASSSTL-METEEGFQPVFFQPRG-LKNLVRIEQVESLMPIMDMRIANL 413
             F+++G D +   +  T+ ME ++GF  ++F+ R  LKNLV+   + SL PI+D ++ ++
Sbjct: 358  FFKSLGDDTEEGNNEGTITMEEKDGF--IWFKQREELKNLVQTSTLSSLSPIVDFKVLDI 415

Query: 414  FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN----VNDEFD 469
              EE PQ+++LCG    SSL++LR GL+VS +  ++LPGVPS +WTV K+      D+ D
Sbjct: 416  VREENPQLYSLCGTSKDSSLKVLRHGLSVSTITNAKLPGVPSGIWTVPKSNSPSAQDQTD 475

Query: 470  AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG 529
             YIVVSF  +T VLS+GET++E  +SG L++T +L +  +G+DS++QV P+G R IR D 
Sbjct: 476  KYIVVSFVGSTSVLSVGETIQENHESGILESTTTLLIGSMGEDSILQVFPTGFRFIRSDM 535

Query: 530  RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
            R NEWR PG++TIV+   N+ Q+VIALSGGE+IYFE+D +G L E+ K +   D+AC++I
Sbjct: 536  RTNEWRAPGRKTIVRATCNQNQLVIALSGGEVIYFELDQSGGLTEIIKKDFRRDIACIEI 595

Query: 590  ASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCM-QILSVQSVSSPPESLLFLEVQASVGG 648
            + +P+GR  +RFLA+  ++  +R+LSLD D+C+ QI  + +     ESL  +E+Q +  G
Sbjct: 596  SPIPKGRSMARFLAISDWEGPVRLLSLDRDNCLGQISMLDTDKVYIESLSIVEMQVNEAG 655

Query: 649  EDG-----ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG 703
             D       +   SLFL  GL+NGV+ R  +D  +G+LSD R+R LG RP KLF + V G
Sbjct: 656  VDNFKVSSQNMGGSLFLFVGLKNGVIKRATLDNYSGELSDIRTRLLGRRPVKLFKIKVRG 715

Query: 704  RAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIE 763
               +L LSSR WL Y ++G+  + PLS E LE A++ SSDQ  E +V+ + + + +FTI+
Sbjct: 716  GNGILALSSRVWLNYANQGKLEIVPLSVEPLENASNLSSDQSPESIVATSEDHIIIFTID 775

Query: 764  RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTA----EEREAAKKECFEAAG 819
            +LG+ FN+  + L  TPRRF++ P+   ++ +ET+    T     E+  A ++  +E   
Sbjct: 776  KLGDLFNQETIKLGATPRRFIVHPQTNYIITLETETNYNTEQIDIEKINAERQAEYEKKK 835

Query: 820  --MGENGNGNMDQMENGDDENKYDPLSDEQYGY-PKAESDKWVSCIRVLDPRSANTTCLL 876
              + EN + +MD  +N DD N    +   ++ Y PKA   +W S I+++DP S       
Sbjct: 836  QEIQENMDMDMDMDDNNDDANTDGQIKKPKFIYKPKAGRGQWRSIIKIIDPISHQVYESY 895

Query: 877  ELQDNEAAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            +L +NEA FS+CT++F D+  G + L VG    +   PK +  +  I++Y+F EEGK L+
Sbjct: 896  QLDENEAGFSLCTLSFSDRGDGEIFLVVGCGNNVILNPK-SCESASINLYKFTEEGKKLQ 954

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
            L++KT+ E    A+  FQGRL AG+G  +R+YD+GKK+LLRKCE K  PNTIV+I++  D
Sbjct: 955  LVYKTEAEEPVYAMAPFQGRLCAGVGKNIRIYDMGKKKLLRKCETKNLPNTIVNIHSLGD 1014

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            R+ VGDIQES HF KY++ EN LY+FADD  PRW+T++  +D+DT+AGADKFGNI+ +RL
Sbjct: 1015 RLVVGDIQESIHFIKYKKLENMLYVFADDLAPRWITSSVMLDYDTVAGADKFGNIFILRL 1074

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
            P +VSDE+EEDPTG K+K+E G LNGAP+K+E I     GD +T+L K SLV GG + ++
Sbjct: 1075 PSNVSDEVEEDPTGSKLKFESGLLNGAPHKLEHIANIFAGDAITTLNKTSLVVGGSDVLL 1134

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDL 1175
            Y T+ G++GA++ F SR+DVDFFS LE+ +R EH PLCGRDH+AYRS YFPVK++IDGDL
Sbjct: 1135 YTTISGAIGALIPFVSREDVDFFSSLELQLRNEHAPLCGRDHLAYRSYYFPVKNIIDGDL 1194

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            CEQF TL    QR+IA+EL R+P E+LKKLE+IR++
Sbjct: 1195 CEQFITLDPQKQRQIAEELSRSPSEVLKKLEDIRSQ 1230


>gi|426192113|gb|EKV42051.1| hypothetical protein AGABI2DRAFT_229642 [Agaricus bisporus var.
            bisporus H97]
          Length = 1213

 Score = 1272 bits (3292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1228 (51%), Positives = 852/1228 (69%), Gaps = 40/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT  + A+ GNFSG +  EI+V+ G  LELLRP+  +G++ T+++T++FG
Sbjct: 1    MHLYNLTLQPPTAALQAVVGNFSGARQQEIIVSHGTRLELLRPDPQTGKVVTVIATDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG+ KDY ++GSDSGRI+ILEY+   + F K+HQETFGKSG RRIVPGQY
Sbjct: 61   SIRSLASFRLTGATKDYAILGSDSGRIIILEYDAKTSSFAKLHQETFGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHK+ +I++ I G+D GF+NP
Sbjct: 121  LATDPKGRSVMIAAMEKAKLVYILNRDAAANLTISSPLEAHKNSSIIHHIVGLDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            ++AA+E+DYSE+DQD TG+A   A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  VYAALEVDYSESDQDPTGEAFKRAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHR 290
            G        DGPSGVLVC E+ +IY++   P  R  IPRR       ERGV+I SA  H+
Sbjct: 241  GQLASSDRFDGPSGVLVCCEDHIIYRHMDSPQHRVPIPRRQHPLEDKERGVIITSAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ+E GD+FKVT+EH++E V  LKIKYFDT+PV +S+C+LKSG+LF ASEFG
Sbjct: 301  MKGAFFFLLQSEDGDLFKVTIEHEDEEVKALKIKYFDTVPVASSLCILKSGFLFVASEFG 360

Query: 351  NHALYQFQAIGAD---PDVEASS---STLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            NH LYQFQ +G D   P+  ++S   S + E +     V+F+PR L NL   +++ESL P
Sbjct: 361  NHYLYQFQKLGDDDEEPEFSSTSFPSSGMAEPQAALPRVYFKPRPLDNLALADELESLDP 420

Query: 405  IMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            I+D ++ NL    + PQIF  CGRG RSSLR L+ GL V E   S LPG+P+AVWT K+N
Sbjct: 421  IIDSKVLNLLPNSDTPQIFAACGRGARSSLRTLQHGLEVEESVSSDLPGIPNAVWTTKRN 480

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D +D+YI++SF N TLVLSIGET+EEV D+GFL + P+LAV  IG D+L+QVHP GIR
Sbjct: 481  EDDPYDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPHGIR 540

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSG 582
            H+  D R+NEWR P  + IV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M  
Sbjct: 541  HVLADRRVNEWRVPSNKIIVAATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS 600

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE- 641
             V  L I  VPEGR+R+ +LAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++   + 
Sbjct: 601  TVLALSIGDVPEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSAICIADM 660

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            + AS+          ++F+N GLQNGVL RTV+D + GQL+D+R+RFLG RP KL  V++
Sbjct: 661  LDASINKAQ-----PTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVLI 715

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
                A+L LSSR WL Y ++     TPL YE L+YA SFS++   EG++ ++G+ LR+F 
Sbjct: 716  HKHPAILALSSRSWLNYTYQNFMHFTPLIYENLDYAWSFSAELSPEGLIGISGSVLRIFH 775

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            + RLG    + ++PL YTPR+F+  P   L  +IE D   +    ++A  K+  E     
Sbjct: 776  VPRLGIKLKQDSIPLSYTPRKFITYPLNNLFYLIEGDHRVMG---QDAVDKKLNE----- 827

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
                  + Q     D+   + LS E +G PKA +  W S IR++DP    T  ++ L  N
Sbjct: 828  ------LRQQNKAIDQEVLN-LSPEVFGRPKAANGTWASNIRIIDPVEGKTISVVPLDGN 880

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            E+AFS+  V F  K +   L VGTA   +  P R    G++ +Y+F+E+G+ LEL+HKT+
Sbjct: 881  ESAFSLAVVPFSAKGNELHLVVGTAADTKLSP-RTCSTGFLRVYKFLEDGRQLELVHKTE 939

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            ++ +PLAL  FQGRL+AG+G  LR+YD+GKK++LRK ENK F + IV+++T   RI VGD
Sbjct: 940  IDDVPLALMAFQGRLVAGVGKALRIYDIGKKKMLRKVENKQFGSAIVTLSTQGSRILVGD 999

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  F  Y+  EN+L IFADDS PRW++AA  +D++T+  AD+FGNI+  RL   VSD
Sbjct: 1000 MQESIFFAVYKAPENRLLIFADDSQPRWISAATMVDYNTVVAADRFGNIFVNRLDPRVSD 1059

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            +++EDPTG  I  E+G   GAP+K + I  FHVGD++TS+ K SLV GG E ++Y  + G
Sbjct: 1060 QVDEDPTGAGILHEKGLYMGAPHKTKMICHFHVGDLITSIHKVSLVAGGREVLLYTGLHG 1119

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++G ++ F +++DVDF S LE HMR E   L GRDH+ +R  Y PVK V+DGDLCE +  
Sbjct: 1120 TIGILVPFVTKEDVDFISTLEQHMRTEQVSLVGRDHLGWRGYYVPVKAVVDGDLCEMYAK 1179

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIR 1209
            L    Q  IA ELDR+ GE+LKKLE++R
Sbjct: 1180 LPGSKQSAIAGELDRSIGEVLKKLEQLR 1207


>gi|336371417|gb|EGN99756.1| hypothetical protein SERLA73DRAFT_88390 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336384183|gb|EGO25331.1| hypothetical protein SERLADRAFT_355643 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1216

 Score = 1268 bits (3280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1231 (51%), Positives = 845/1231 (68%), Gaps = 43/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ P+ +  AI GNFSG +  EI+V+ G  LELLRP+  +G++ T+++T++FG
Sbjct: 1    MHLYNLTLQPPSAVTQAIVGNFSGVRQQEIIVSHGTRLELLRPDVQTGKLSTVIATDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY +VGSDSGRIVIL+Y+P  + F K+HQETFGKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGGTKDYAIVGSDSGRIVILDYDPRTSSFVKLHQETFGKSGSRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHK+  I++ I G+D GF+NP
Sbjct: 121  LATDPKGRSVMISAMEKAKLVYILNRDAAANLTISSPLEAHKNAAIIHHIVGLDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+E+DQD TG+A + A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  LFAALEVDYTESDQDPTGEAFNNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHR 290
            G        DGPSGVLVC E+ +IY++ G P  R  IPRR       ERG++IV+A  H+
Sbjct: 241  GQLASSERFDGPSGVLVCCEDHIIYRHMGVPQHRIPIPRRRHPLEDPERGIIIVAAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ+E GD++KVT+EH+++ V  LKIKYFDT+PV +S+C+LKSG+LF ASEFG
Sbjct: 301  MKGAFFFLLQSEDGDLYKVTIEHEDDEVKALKIKYFDTVPVASSLCILKSGFLFVASEFG 360

Query: 351  NHALYQFQAIGAD---PDVEASSSTLMETEEGFQPV---FFQPRGLKNLVRIEQVESLMP 404
            NH LYQFQ +G D   P+  ++S       E   P+    F PR L NL   +++ESL P
Sbjct: 361  NHYLYQFQKLGDDDNEPEFSSTSYPSFGMAEPSMPLPHAHFHPRALDNLALADEMESLDP 420

Query: 405  IMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            I+D ++ N+    + PQIF  CGRG RSSLR+LR GL V E   S+LPG+P+AVWT K+ 
Sbjct: 421  ILDSKVMNILPNSDTPQIFAACGRGARSSLRMLRHGLDVEESVSSELPGIPNAVWTTKRK 480

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D FD+YI++SF N TLVLSIGET+EEV D+GFL + P+LAV  IG D+L+QVHP GIR
Sbjct: 481  EDDPFDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPQGIR 540

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSG 582
            H+  D R+NEWR P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M  
Sbjct: 541  HVLADRRVNEWRVPQGKTIVSAATNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS 600

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE- 641
             V  L +  VPEGR+R+ +LAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++   + 
Sbjct: 601  TVLALSVGEVPEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSAICIADM 660

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            + AS+          ++F+N GLQNGVL RTV+D + GQL+D+R+RFLG RP +L  V +
Sbjct: 661  LDASINKTQ-----PTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRLVRVQI 715

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
             G  A+L LSSR WL Y H+     TPL +E L+YA SFS++   EG++ +AG+ LR+F 
Sbjct: 716  HGNPAILALSSRSWLNYTHQNLMHFTPLIFENLDYAWSFSAELSPEGLIGIAGSVLRIFQ 775

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I +LG    +  +PL YTPR+F+  P  +   +IE D   L     +AA K   E     
Sbjct: 776  IPKLGTKLKQDTIPLSYTPRKFISHPTNRYFYLIEGDHRVLG---EDAAAKRLDE----- 827

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
                  M Q     D+N  D L  E +G PKA +  W S IR++DP  A T  ++ L  N
Sbjct: 828  ------MRQRGKMVDDNMLD-LPPEVFGRPKAPAGTWASAIRIIDPVEAKTLSMITLDSN 880

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            E AFS+  V F  + +   L VGTA    F   R+  +G++  Y+F E+G  LELLHKT+
Sbjct: 881  ECAFSLAIVPFSARGNELHLVVGTAAD-TFLAPRSCSSGFLRTYKFTEDGTGLELLHKTE 939

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK---LFPNTIVSINTYRDRIY 998
             + +PLAL  FQGRL+AG+G  LR+YD+GKK+LLRK ENK    F   IV++NT   RI 
Sbjct: 940  TDDVPLALMAFQGRLVAGVGKALRIYDIGKKKLLRKVENKARATFSTAIVTLNTQGSRII 999

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+QES  F  Y+  EN+L +FADD+ PRW+TA   +D+ T+A  D+FGNI+  RL   
Sbjct: 1000 VGDMQESISFVAYKAPENRLLVFADDNQPRWITATTMVDYTTIAAGDRFGNIFVNRLDPK 1059

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            VS+++++DPTG  I  E+G L GAP+K + +  FH+GD+VTS+ K SLV GG E ++Y  
Sbjct: 1060 VSEQVDDDPTGAGILHEKGLLMGAPHKTKMLAHFHIGDLVTSINKVSLVAGGREVLLYTG 1119

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            + G++G ++ F S++DVDF S LE HMR E   L GRD +++R  Y PVK V+DGDLCE 
Sbjct: 1120 LHGTIGILVPFVSKEDVDFISTLEQHMRTEQGSLVGRDQLSWRGYYTPVKSVVDGDLCET 1179

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            +  L    Q  IA ELDRT GE+LKKLE++R
Sbjct: 1180 YARLPGTKQSAIAGELDRTVGEVLKKLEQLR 1210


>gi|409045147|gb|EKM54628.1| hypothetical protein PHACADRAFT_210427 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1213

 Score = 1266 bits (3275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1228 (51%), Positives = 844/1228 (68%), Gaps = 40/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ  T I  AI GNFSG +  EI+V+RG  LELLRP+  +G++ T+V++++FG
Sbjct: 1    MHLYNLTLQPSTTISQAIVGNFSGARQQEIIVSRGTRLELLRPDVQTGKVSTVVTSDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSL  FRLTG  KDY +VGSDSGRIVIL+Y+P  + F K+HQET+GKSG RRIVPGQY
Sbjct: 61   SIRSLTAFRLTGGTKDYAIVGSDSGRIVILDYDPKTSSFVKVHQETYGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHK++ I++ I G+D GF+NP
Sbjct: 121  LATDPKGRSVMIAATEKAKLVYILNRDAAANLTISSPLEAHKNNAIIHHIVGLDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FAA+E+DYSE+DQD TG+A + A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  TFAALEVDYSESDQDPTGEAFNNAEKLLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHR 290
            G        DGPSGVLVC E+ +IY++   P  R  IPRR       ERG++I +A  H+
Sbjct: 241  GQLASSDRYDGPSGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLEDKERGLIITAAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ+E GD++KVT+EH+ + V  LKIKYFDT+PV +S+C+LKSG+LF A+EFG
Sbjct: 301  MKGAFFFLLQSEEGDLYKVTIEHEEQDVKALKIKYFDTVPVASSLCILKSGFLFVAAEFG 360

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEGFQ-------PVFFQPRGLKNLVRIEQVESLM 403
            NH LYQFQ +G D D E   S+ M    G         P +F PRGL NL  ++++ESL 
Sbjct: 361  NHHLYQFQKLGDD-DNEPEFSSTMYPNFGMANPAISLPPAYFSPRGLDNLTLVDELESLD 419

Query: 404  PIMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
            P++D ++ NL    ++PQIF  CGRG RSSLR+LR GL V E+  S LPG+P+AVWT K 
Sbjct: 420  PVVDAKVLNLLPNSDSPQIFAACGRGGRSSLRMLRHGLEVEEVVSSDLPGIPNAVWTTKL 479

Query: 463  NVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
              +D FD+YI++SF N TLVLSIGET+EEV D+GFL ++P+LAV  +G D+L+QVHP GI
Sbjct: 480  REDDPFDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSSPTLAVQQLGADALLQVHPHGI 539

Query: 523  RHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMS 581
            RH+  D R+NEWR P  +TIV   +NR QVV+ALS  EL+YFE+D+ GQL E  E+  M 
Sbjct: 540  RHVLVDRRVNEWRVPQGKTIVCATTNRRQVVVALSSAELVYFELDLEGQLNEYQERKAMG 599

Query: 582  GDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE 641
              V  L +  VPEGR+R+ FLAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++   +
Sbjct: 600  STVLALSVGEVPEGRQRTPFLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIAD 659

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            +   +        P + F+N GLQNGVL RTV+D + GQL+D+R+RFLG RP KL  V +
Sbjct: 660  M---LDAGINKVQPTT-FVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVQI 715

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
                 +L LSSR WL Y H+     TPL ++ L+YA SFS++ C EG++ ++G+ LR+F 
Sbjct: 716  QRNPGILALSSRSWLNYTHQNLMHFTPLIFDNLDYAWSFSAELCPEGLIGISGSVLRIFQ 775

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I +LG    + ++PL YTPR+ ++ P      +IE D   +  E ++   +E      + 
Sbjct: 776  IPKLGTKLKQDSIPLSYTPRKMIVHPTNGFFYMIEGDHRVMGEEAKQKKIEE------LR 829

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
            + G    ++M N         L  E +G PKA +  W S IR++ P  A T   + L +N
Sbjct: 830  QQGKQVDEEMLN---------LPPEVFGRPKAPAGTWASGIRIVSPVDAQTVNFIPLDNN 880

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            EAAFSI  V F  +     L VGTA+   F   R+  +G++  YRF+++G+ +ELLHKT+
Sbjct: 881  EAAFSIAVVPFTARGGELTLVVGTAQD-TFLAPRSCTSGFLRTYRFLDDGRDIELLHKTE 939

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
               +PLA+  FQGRL AGIG  LR+YD+GKK+LLRK E+K F N IV++NT   RI VGD
Sbjct: 940  TNDVPLAIMAFQGRLAAGIGKALRIYDIGKKKLLRKVESKNFSNAIVTLNTQGSRIIVGD 999

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  +  Y+  EN+L IFADD+ PRW+TA   ID++T+A  D+FGN++  RL   +SD
Sbjct: 1000 MQESIFYAVYKPPENRLLIFADDAQPRWITAVTMIDYNTVAAGDRFGNVFVNRLDPKISD 1059

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            ++++DPTG  I  E+G L GAP+K   I  FHVGD+VTS+ K SLV GG E ++Y  + G
Sbjct: 1060 QVDDDPTGAGILHEKGILMGAPHKTAMIAHFHVGDIVTSIHKVSLVAGGRELLLYTGLHG 1119

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++G ++ F S++DVDF S LE HMR E   L GRDH+A+R  Y PVK V+DGDLCE F  
Sbjct: 1120 TVGILVPFVSKEDVDFISTLEQHMRTEQLSLVGRDHLAWRGYYVPVKAVVDGDLCEMFAR 1179

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIR 1209
            L    Q  IA ELDRT GE+LKKLE++R
Sbjct: 1180 LPASKQSSIATELDRTVGEVLKKLEQLR 1207


>gi|393217872|gb|EJD03361.1| hypothetical protein FOMMEDRAFT_108572 [Fomitiporia mediterranea
            MF3/22]
          Length = 1213

 Score = 1265 bits (3274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1231 (51%), Positives = 841/1231 (68%), Gaps = 46/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            MYLY+LTLQ PT    AI GNFSG +  EI+V+ G  LELLRP+  +G+I T+++ + FG
Sbjct: 1    MYLYNLTLQPPTAATHAIVGNFSGARQQEIIVSHGSRLELLRPDVQTGKISTVIANDAFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY ++GSDSGRIVILEY+P  + F K+HQET+GKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGGTKDYAILGSDSGRIVILEYDPKTSSFIKLHQETYGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHK+  I++ I G+D GF+NP
Sbjct: 121  LATDPKGRSVMISAMEKAKLVYILNRDAAANLTISSPLEAHKNAAIIHHIVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            ++AA+E+DY+E+DQD TG+A + A+K LTFYELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  LYAALEVDYTESDQDPTGEAFNNAEKLLTFYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHR 290
            G        DGPSGVLVC E+ +IY+N   P  R  IPRR       ERG++IVSA  H+
Sbjct: 241  GQLATSDRFDGPSGVLVCCEDHIIYRNMDSPQHRVPIPRRRHPLEDKERGLIIVSAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K  FFFLLQ+E GD++KVT++H++E V  LKIKYFDT+PV +S+C+LKSG+LF ASEFG
Sbjct: 301  MKGAFFFLLQSEEGDLYKVTIDHEDEDVRALKIKYFDTVPVASSLCILKSGFLFVASEFG 360

Query: 351  NHALYQFQAIGADPDVEASSST------LMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            NH LYQFQ +G D +    SST      + +        +F+PR L NLV  +++ESL P
Sbjct: 361  NHHLYQFQKLGDDDNEPEFSSTDYPNFGMADPTVPLPAAYFKPRPLDNLVLADEIESLDP 420

Query: 405  IMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            I+D ++ N+    + PQIF  CGRG RSS R LR GL V E+  S LPG+P+AVWT +  
Sbjct: 421  IIDSKVMNILPNSDTPQIFAACGRGARSSFRTLRHGLEVEEVVSSDLPGIPNAVWTTRIK 480

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D +D+YI++SF N TLVLSIGET+EEV D+GFL + P+LAV  IG D+L+QVHP GIR
Sbjct: 481  EDDPYDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPQGIR 540

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSG 582
            H+  D R+NEWR P  RTIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M  
Sbjct: 541  HVLADRRVNEWRVPQGRTIVAATTNKRQVVVALSSAELVYFELDLEGQLNEYQDRKAMGS 600

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV 642
             V  L +  VP GR+R+ +LAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++   ++
Sbjct: 601  TVLALSVGEVPPGRQRTPYLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADM 660

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
              S   ++      ++F+N GLQNGVL RTV+D V GQL+D+R+RFLG RP KL  V V 
Sbjct: 661  LDSSIDKNQP----TMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPVKLMRVQVQ 716

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              +++L LSSR WL Y H+G    TPL +ETL++A  FS++ C EG++ ++G+ LR+F I
Sbjct: 717  RNSSILALSSRSWLNYTHQGLLHFTPLIFETLDHAWEFSAELCPEGLIGISGSVLRIFQI 776

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
             RLG    + ++PL YTPR+F+  P  +   +IE D   +     +AAK++  E    G 
Sbjct: 777  PRLGTKLKQDSMPLTYTPRKFIPHPMNQYFYMIEADHRVMG---DDAAKEKLAELRQRGV 833

Query: 823  NGNGNMDQMENGDDENKYDP----LSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLEL 878
                            KYD     L  E +G PKA +  W SCIR+LDP +  T  ++ L
Sbjct: 834  ----------------KYDQEVVDLPPEVFGRPKAPAGTWGSCIRILDPINKATVKVVHL 877

Query: 879  QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
             +NEAAFSI  V F  +     L VGTA    F   R+  +G+I  Y F   G  LEL+H
Sbjct: 878  DNNEAAFSIAIVPFAARNSELFLCVGTASS-TFLAPRSCSSGFIRTYAFTNGGADLELVH 936

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            KT+ + +P+AL  FQGRL AG+G  LR+Y++GKK+LLRK E K + + IV++NT   RI 
Sbjct: 937  KTEADDVPMALMAFQGRLCAGVGKSLRIYEIGKKKLLRKVETKTYGSAIVTLNTQGSRII 996

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+QES  +  ++  EN+L IFADDS PRW T+A  +D+ T+A  DKFGN++  RL   
Sbjct: 997  VGDMQESIVYAVFKPPENRLLIFADDSQPRWTTSAVMVDYTTIAAGDKFGNVFINRLDSK 1056

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            +SD+++EDPTG  I  E+G L GAP+K   I  FHVGD+VTS+ K SLV GG E ++Y  
Sbjct: 1057 ISDQVDEDPTGAGILHEKGLLMGAPHKTGMIAHFHVGDIVTSIHKISLVAGGREVLLYTC 1116

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            + G++G ++ F S++DVDF S LE HMR E   L GRDH+A+R  Y PVK V+DGDLCEQ
Sbjct: 1117 LHGTIGILVPFVSKEDVDFISTLEQHMRSEKLSLVGRDHLAWRGYYVPVKAVVDGDLCEQ 1176

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            F  L  + Q  IA ELDRT GE+LKKLE++R
Sbjct: 1177 FARLPANKQSAIAVELDRTVGEVLKKLEQLR 1207


>gi|260819270|ref|XP_002604960.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
 gi|229290289|gb|EEN60970.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
          Length = 1049

 Score = 1263 bits (3269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1057 (58%), Positives = 793/1057 (75%), Gaps = 19/1057 (1%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ+ TG+  AI+GNFSGT+  EI+ +RGK+LEL+RP+ N+G+I TL+S EIFG
Sbjct: 1    MFLYALTLQRATGVTHAIHGNFSGTRQQEIITSRGKILELMRPDPNTGKIHTLLSVEIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIV G+DSGRIVILEY P+KN FDK+HQETFGKSGCRRIVPGQY
Sbjct: 61   VIRSLMSFRLTGGTKDYIVCGTDSGRIVILEYLPAKNKFDKVHQETFGKSGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA+MIGA EKQKLVY+LNRD AARLTISSPLEAHKS+T+ Y + G+D GF+NP
Sbjct: 121  LAVDPKGRALMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSNTLCYHLVGVDIGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY +AD D TG+++   Q+ LTFYELDLGLNHV RK+SEP++   N L+ VPG
Sbjct: 181  MFACLEIDYEDADNDPTGESSQSTQQCLTFYELDLGLNHVVRKYSEPLEEHGNFLIAVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G +GPSGVL+C+EN++ YKN G  PD+R+ IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSEGPSGVLICSENYITYKNFGDQPDIRSPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFK+TLE D + V+E+K+KYFDT+PV  SMCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG     F PRGLKNLV +++++SL PIM  +IA+L  
Sbjct: 360  QIAHLG-DDDEEPEFSSAMPLEEG-DTFLFTPRGLKNLVLVDEMDSLSPIMSCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++   GRGPRSS R+LR GL VSEMAVS+LPG P+AVWTVKKNV+DEFDAYIVVS
Sbjct: 418  EDTPQLYVANGRGPRSSFRVLRHGLEVSEMAVSELPGNPNAVWTVKKNVDDEFDAYIVVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SLIG+D+L+Q++P GIRHIR D R+NEWR
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLIGEDALLQIYPEGIRHIRSDKRVNEWR 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ EMS +V C+ +A+VP 
Sbjct: 538  TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSAEVICMALANVPV 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +R RFLAVG  D+T+RI+SLDP DC+Q LS+Q++ + PESL  L++    G +D    
Sbjct: 598  GEQRCRFLAVGLTDDTVRIISLDPADCLQPLSMQALPATPESLCILQMGGGEGIDDTGPR 657

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
               LFLN GLQNGVL RTV+D +TG LSD+R+R+LG RP KLF V + G  A+L +SSR 
Sbjct: 658  NTMLFLNIGLQNGVLLRTVLDQITGDLSDTRTRYLGSRPVKLFQVKMQGNEAVLAMSSRS 717

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  FN+ + 
Sbjct: 718  WLSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISANTLRILALEKLGAVFNQIST 777

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENGNGNMDQ 830
            PL YTPR+FV+  +   +++IETD  + T    A+ ++   +E  EAAG  E      + 
Sbjct: 778  PLMYTPRKFVIDTQSNNIIMIETDHNSYTEATKAQRKQQMAEEMVEAAG-EEEKELAAEM 836

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTV 890
                 +EN    L +  +G PKA    W S IRVL+P   NT  L++L+ NEAAFSI   
Sbjct: 837  AAAFINEN----LPEATFGSPKAGPGMWASVIRVLNPIQGNTLDLIQLEQNEAAFSIAIC 892

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
             F ++   T + VGTAK +   P R    G++H Y+ V  G+ LEL+HKT VE +P A+ 
Sbjct: 893  KFANRGEDTFVVVGTAKDMTMNP-RTCSGGFLHTYQLVNNGEKLELIHKTPVEDVPGAIS 951

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
             FQGR+L GIG +LR+YDLGKK+LLRKCENK  PN I+SI+T   RI+V D+QESFHF +
Sbjct: 952  SFQGRILVGIGRLLRIYDLGKKKLLRKCENKHVPNFIMSIHTMGHRIFVSDVQESFHFIR 1011

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKF 1047
            Y+R ENQL IF+DD+  RW+T +  +D+DT+A    F
Sbjct: 1012 YKRQENQLIIFSDDTNYRWITCSTQLDYDTVAAGQAF 1048


>gi|66811906|ref|XP_640132.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
 gi|74854972|sp|Q54SA7.1|SF3B3_DICDI RecName: Full=Probable splicing factor 3B subunit 3
 gi|60468134|gb|EAL66144.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1256

 Score = 1263 bits (3267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1261 (49%), Positives = 882/1261 (69%), Gaps = 58/1261 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLY+LTLQ+PT +  +I+GNFSGTK  EIV+  G+ LEL+R + +G++++++ TE+FG 
Sbjct: 1    MYLYNLTLQRPTSVYQSISGNFSGTKQVEIVLNHGRSLELIRYDENGKMQSVLYTEVFGI 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +RS+  FRLT   KDYI+VGSDSGR+VILEYN  KN FDKIHQETFG+SGCRRIVPGQYL
Sbjct: 61   VRSIIPFRLTSGTKDYIIVGSDSGRVVILEYNSQKNQFDKIHQETFGRSGCRRIVPGQYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRA MIGA EKQKLVY+LNRD++A LTISSPLEAHKS+TIV+S+CG+D GFDNPI
Sbjct: 121  AVDPKGRAFMIGAIEKQKLVYILNRDSSANLTISSPLEAHKSNTIVFSMCGVDVGFDNPI 180

Query: 181  FAAIELDYSEAD-----------QDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDN 229
            FA I +DY+E D           ++   +   + +K LT+YELDLGLN+V RKWS+ VD+
Sbjct: 181  FATISVDYTEEDSSSGGGGGGSIEEMMDEDIGKKKKLLTYYELDLGLNNVVRKWSDQVDD 240

Query: 230  GANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH 289
             AN+++TVPGG +GP GVLV +E++++Y+NQ H +VR+ IPRR      +GVLI+S ++H
Sbjct: 241  SANIVMTVPGGTEGPGGVLVASEDYIVYRNQDHAEVRSRIPRRYGSDPNKGVLIISHSSH 300

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            +QK +FFFL+Q+E+GD++K+TL++  + VSE+ + YFDTI +   + VLK+G+LFAASEF
Sbjct: 301  KQKGMFFFLVQSEHGDLYKITLDYQGDQVSEVNVNYFDTIVLANCLTVLKNGFLFAASEF 360

Query: 350  GNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRG--------LKNLVRIEQVES 401
            G+H LY F++IG +   E   +  +E ++G   ++F PR         LKNL     + S
Sbjct: 361  GDHTLYFFKSIGDEE--EEGQAKRLEDKDGH--LWFTPRNSCGTKMEELKNLEPTSHLSS 416

Query: 402  LMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK 461
            L PI+D ++ +L  EE PQ+++LCG G  SSL++LR GL+V+ +  + LPGVPS +WTV 
Sbjct: 417  LSPIIDFKVLDLVREENPQLYSLCGTGLNSSLKVLRHGLSVTTITTANLPGVPSGIWTVP 476

Query: 462  K----NVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQV 517
            K    N  D+ D YIVVSF   T VLS+G+T++E  +SG L+TT +L V  +GDD+++QV
Sbjct: 477  KSTSPNAIDQTDKYIVVSFVGTTSVLSVGDTIQENHESGILETTTTLLVKSMGDDAIIQV 536

Query: 518  HPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEK 577
             P+G RHI+ D RINEWR PG++TIV+  +N+ Q+ IALSGGE+IYFE+D    L+E+ K
Sbjct: 537  FPTGFRHIKSDLRINEWRAPGRKTIVRASANQSQLAIALSGGEIIYFELDQASNLIEIIK 596

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCM-QILSVQSVSSPPES 636
             ++  D+AC++I+ +P+GR  +RF+AV  ++  IR+LSLD D+C+ Q+  + +     ES
Sbjct: 597  KDLRRDIACIEISPIPKGRNMARFIAVSDWEGPIRVLSLDRDNCLGQVSMLDTDKVYIES 656

Query: 637  LLFLEVQASVGGEDGADHPAS-----------------------LFLNAGLQNGVLFRTV 673
            L  +E+Q +  G +     +                        LFL  GL+NGV+ R  
Sbjct: 657  LSIIEMQLNEMGIETKKSQSQTGQTTTTTTSTSSASSSVTSGGSLFLFVGLKNGVVKRAT 716

Query: 674  VDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYET 733
            +D VTG+LSD R+R LG +P KLF V V G  AML LSSR WL YI++G+  + PLS E 
Sbjct: 717  LDSVTGELSDIRTRLLGRKPVKLFKVKVRGSNAMLALSSRVWLNYINQGKLDIVPLSIEP 776

Query: 734  LEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMV 793
            LE A++ SS+Q  E +V+ + N + +F+I++LG+ FN+  + L  TP+RF++ P+   ++
Sbjct: 777  LENASNLSSEQSAESIVATSENKIIIFSIDKLGDLFNQETIKLNATPKRFIIHPQTSYII 836

Query: 794  IIETDQGALTAE---EREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGY 850
            I+ET+    T     ++   + E        E         ++ ++ N+ +P   ++   
Sbjct: 837  ILETETNYNTDNIDIDKINEQSEKLLLEKQKELQQEMDIDDDDQNNNNEIEPF--KKLFK 894

Query: 851  PKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQ 910
            PKA   KW S I+++DP +  +   L L+D EA FS+CT +F +      L VG    + 
Sbjct: 895  PKAGKGKWKSYIKIMDPITHESLESLMLEDGEAGFSVCTCSFGESGE-IFLVVGCVTDMV 953

Query: 911  FWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLG 970
              PK +  A ++++YRF++ GK LELL+KT+VE    A+ QFQG+L+ G+G  +R+YD+G
Sbjct: 954  LNPKSHKSA-HLNLYRFIDGGKKLELLYKTEVEEPVYAMAQFQGKLVCGVGKSIRIYDMG 1012

Query: 971  KKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWL 1030
            KK+LLRKCE K  PNTIV+I++  DR+ VGDIQES HF KY+R EN LY+FADD  PRW+
Sbjct: 1013 KKKLLRKCETKNLPNTIVNIHSLGDRLVVGDIQESIHFIKYKRSENMLYVFADDLAPRWM 1072

Query: 1031 TAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV 1090
            T++  +D+DT+AGADKFGNI+ +RLP  +SDE+EEDPTG K+K+E G LNGAP+K++ I 
Sbjct: 1073 TSSVMLDYDTVAGADKFGNIFVLRLPLLISDEVEEDPTGTKLKFESGTLNGAPHKLDHIA 1132

Query: 1091 QFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP 1150
             F VGD VT+L K SLV GG E ++Y T+ G++GA++ F+SR+DVDFFS LEM+MR +  
Sbjct: 1133 NFFVGDTVTTLNKTSLVVGGPEVILYTTISGAIGALIPFTSREDVDFFSTLEMNMRSDCL 1192

Query: 1151 PLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            PLCGRDH+AYRS YFPVK++IDGDLCEQF TL+   Q  I++EL R+P E++KKLEEIR+
Sbjct: 1193 PLCGRDHLAYRSYYFPVKNIIDGDLCEQFSTLNYQKQLSISEELSRSPSEVIKKLEEIRS 1252

Query: 1211 K 1211
            +
Sbjct: 1253 Q 1253


>gi|325189950|emb|CCA24429.1| splicing factor putative [Albugo laibachii Nc14]
          Length = 1644

 Score = 1261 bits (3264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/1227 (49%), Positives = 851/1227 (69%), Gaps = 34/1227 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+L +LTL  PT I AA+ GNF+  +  E +VARG  L+LLRP+ SG++E +++T +FG 
Sbjct: 438  MHLLNLTLSPPTAITAAVYGNFTSAQAQEFIVARGNTLDLLRPDASGKLERIITTSVFGV 497

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRS+  FRLTG   DY+VVGSDSG+IV+++ +PS N F     ET+GK+GCRRI PGQYL
Sbjct: 498  IRSIIPFRLTGGTHDYLVVGSDSGKIVVIQVDPSTNTFTACQNETYGKTGCRRITPGQYL 557

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A DPKGRA+MIGA EKQKLVYV+NRD + RLTISSPLEAH+SHT+ + + G+D GF+NPI
Sbjct: 558  ASDPKGRALMIGAVEKQKLVYVMNRDASNRLTISSPLEAHRSHTVHFDVVGVDVGFENPI 617

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FA++EL+++EAD D TGQAA  ++K L +YELDLGLNHV+R+WS+ V   AN LV VPGG
Sbjct: 618  FASLELNHAEADIDPTGQAAHTSEKVLVYYELDLGLNHVTRRWSQVVPRSANKLVAVPGG 677

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD-----LPAERG----VLIVSAATHRQ 291
             DGP GVLV A+  + Y+N+ HP +    P R+      +  ER     ++IVS ATH+Q
Sbjct: 678  NDGPGGVLVIAQGLIQYQNENHPPLSCSFPLRSTGGPNPVQDERKQGYPMMIVSTATHKQ 737

Query: 292  KTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            + LFF L+Q+E+GD+FK++LE+    V +L+I+YFDTIPV  ++C+ K+G LFAASEF N
Sbjct: 738  RDLFFVLMQSEWGDLFKISLEYAGSSVQKLRIQYFDTIPVALALCITKTGLLFAASEFSN 797

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
            H L+QF +IG D D     S     +E   P  F  R LKNL  I  + S+ PI  + + 
Sbjct: 798  HYLFQFLSIGEDDDAAQCVSAAENDQEPEIPS-FSVRKLKNLAMISNIPSISPITQLLVD 856

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            +   E+ PQ++ LCG+G RSSLRILR GL V EMA S LPGV  AVW +K++  D  D Y
Sbjct: 857  DFANEQTPQLYALCGQGNRSSLRILRHGLPVMEMAASALPGVAKAVWCLKESFTDTCDKY 916

Query: 472  IVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI 531
            IVVSF +ATLVL IG+TVEE++DSG L    SL V+L+ D+S++QVH +G RHIR+   +
Sbjct: 917  IVVSFEDATLVLEIGDTVEEITDSGLLRDHSSLLVALLEDNSMLQVHQNGFRHIRKSQPV 976

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIAS 591
             EW+ PGK+ I +  +N  Q+V++L+GGE+IYFE+ +  +L+E  K ++  ++  LD+  
Sbjct: 977  TEWKAPGKKIIERCAANARQLVVSLAGGEVIYFELGV-NELMEKGKLDLGFEITSLDVGQ 1035

Query: 592  VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
            VP+GR+R  FLAVGS+DN++R+LSLDP+D  +  S  +++S P +L F  +Q       G
Sbjct: 1036 VPQGRQRFPFLAVGSWDNSVRVLSLDPNDLFRQKSTLALTSHPHTLCFSNLQTESAA--G 1093

Query: 652  ADHPAS-LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCL 710
            +DH    LFLN GL NGV  +T +D +T  L+DS +RFLG +P KLF V + G+ A+L L
Sbjct: 1094 SDHTTQCLFLNIGLHNGVFQQTRMDSITAALADSSARFLGTKPVKLFCVTIQGKRAILAL 1153

Query: 711  SSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFN 770
            SSR WL Y ++ R  L PLS E L YA+SF S+QC EG+ ++    +++ T++ LG+TFN
Sbjct: 1154 SSRAWLSYFYQTRRQLMPLSTEMLHYASSFQSEQCPEGLAALTSEGMKILTLDHLGDTFN 1213

Query: 771  ETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQ 830
            +    LRYTPRR VL P  + ++I+E+D G     E  AA K+ F   G   +    +  
Sbjct: 1214 QQKCFLRYTPRRMVLHPPSRRLIIVESDYG-----EANAASKQLF---GESLSDTPVIAS 1265

Query: 831  MENGDDENKYDPLSDEQYGYPKAESD----KWVSCIRVLDPRSANTTCLLELQDNEAAFS 886
             E  +DE++   L      YP+ E      KW SC+R+ DP +  T    EL+DNE   S
Sbjct: 1266 EEPEEDEDRQALL------YPRVERSHEPGKWASCVRIFDPITCETIACHELEDNEHTRS 1319

Query: 887  ICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIP 946
            I T  FHD+     + +G+ K L+  P  +   G + +YR V EG  L L+H T V+GIP
Sbjct: 1320 ITTCVFHDRGGEVFVIIGSVKNLRLHPISSPEGGLLRVYRVV-EGSQLVLVHTTPVDGIP 1378

Query: 947  LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESF 1006
             A+ +FQGRLL  +G VLR+YDLGK++LLRKCEN+ F + ++ + +  DRIY  D+ ES 
Sbjct: 1379 YAMIEFQGRLLVSVGKVLRIYDLGKRKLLRKCENRYFTSPMIDLKSAGDRIYASDVHESI 1438

Query: 1007 HFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEED 1066
            HF KY+ ++NQL  FADD VP ++T++  +D+DT+AG DKFGN++  RLP +VSDEI ++
Sbjct: 1439 HFVKYKAEDNQLITFADDCVPHFMTSSTLLDYDTIAGGDKFGNVFVTRLPAEVSDEI-DN 1497

Query: 1067 PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAM 1126
            PTG ++ W+ G LNGAP+K+E+I QFHVG+V+TS+ + SLVPGG E ++Y T++G +GA+
Sbjct: 1498 PTGNRMLWDTGLLNGAPHKLEQIAQFHVGEVITSVLRTSLVPGGMEVILYTTILGRIGAL 1557

Query: 1127 LAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDL 1186
            + F+SRDDVDF++HLEM+MRQE  PLCGRDH++YRS + PVK+V DGDLCEQF +L  D 
Sbjct: 1558 VPFTSRDDVDFYTHLEMYMRQEKAPLCGRDHLSYRSYFIPVKNVTDGDLCEQFSSLGPDK 1617

Query: 1187 QRKIADELDRTPGEILKKLEEIRNKIV 1213
            Q+ IA++LDRTP E++KKL++ RN+++
Sbjct: 1618 QKNIAEDLDRTPTEVVKKLQDTRNRVL 1644


>gi|170083859|ref|XP_001873153.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650705|gb|EDR14945.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1213

 Score = 1259 bits (3259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1229 (51%), Positives = 836/1229 (68%), Gaps = 42/1229 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT I  AI GNFSG +  EI+V+ G  LELLRP+  +G+I T+++T++FG
Sbjct: 1    MHLYNLTLQPPTAITQAIVGNFSGARQQEIIVSHGTRLELLRPDVQTGKISTVIATDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY +VGSDSGRI+IL+Y+P  + F K+HQET+GKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGGTKDYAIVGSDSGRIIILDYDPKTSSFVKLHQETYGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHK+  I++ I G+D GF+NP
Sbjct: 121  LATDPKGRSVMISAMEKAKLVYILNRDAAANLTISSPLEAHKNSAIIHHIVGLDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+E+DQD TG A   A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  MFAALEVDYAESDQDPTGDAFKNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE---RGVLIVSAATH 289
            G        DGPSGVLVC EN +IY++   P  R  IPRR   P E   RG++I +A  H
Sbjct: 241  GQLASSERFDGPSGVLVCCENHIIYRHADVPQHRVPIPRRRH-PLEDLNRGLIITAAVMH 299

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            + K  FFFLLQ+E GD++KVT+EH++E V  LKIKYFDT+PV +++C+LKSG+LF ASEF
Sbjct: 300  KMKGAFFFLLQSEDGDLYKVTIEHEDEEVKSLKIKYFDTVPVASNLCILKSGFLFVASEF 359

Query: 350  GNHALYQFQAIGADPDVEASSST------LMETEEGFQPVFFQPRGLKNLVRIEQVESLM 403
            GNH LYQFQ +G D D    SST      + +        FF+   L NLV  +++ESL 
Sbjct: 360  GNHYLYQFQKLGDDDDEPEFSSTSYPSFGMADPSVPLPHAFFRLHPLDNLVVADELESLD 419

Query: 404  PIMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
            PI+D ++ NL    + PQIF  CGRG RS+ R LR GL V E   S LPG+P+AVWT K+
Sbjct: 420  PILDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEESVSSDLPGIPNAVWTTKR 479

Query: 463  NVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
              +D FD+YI++SF N TLVLSIGET+EEV D+GFL + P+LAV  IG D+L+QVHP GI
Sbjct: 480  TEDDPFDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHGI 539

Query: 523  RHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMS 581
            RH+  D R+NEWR P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M 
Sbjct: 540  RHVLADRRVNEWRVPQGKTIVSATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMG 599

Query: 582  GDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE 641
              V  L I  VPEGR+R+ +LAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++   +
Sbjct: 600  STVLALSIGDVPEGRQRTPYLAVGCEDQTVRIISLDPETTLETISLQALTAPPSAICIAD 659

Query: 642  -VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVV 700
             + AS+          ++F+N GLQNGVL RTV+D + GQL+D+R+RFLG RP KL  V 
Sbjct: 660  MLDASINKSQ-----PTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVQ 714

Query: 701  VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVF 760
            +     +L LSSR WL Y H+     TPL Y+ L+YA SFS++   EG++ +AG+ LR+F
Sbjct: 715  IQRNPGILALSSRSWLNYTHQNLMHFTPLIYDNLDYAWSFSAELSPEGLIGIAGSVLRIF 774

Query: 761  TIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGM 820
             + +LG    + ++PL YTPR+F+  P      +IE D   L  EE  + K + F   G 
Sbjct: 775  QVPKLGTKLKQDSIPLSYTPRKFITHPGNNYFYLIEGDHRTL-GEEAASTKLDEFRRQGK 833

Query: 821  GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
              +           D E    P   E +G PKA +  W SCIR++DP  A T  ++ +  
Sbjct: 834  SFD-----------DGEINIPP---EVFGRPKAPAGTWASCIRIIDPVEAKTVAVIPMDS 879

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAAFS+  V F  +     L VGTA      P R+  +GY+  Y+F  EG  LE  HKT
Sbjct: 880  NEAAFSLAIVPFSARNGELHLVVGTAADTIVSP-RSCTSGYLRTYKFTNEGAGLEFQHKT 938

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +V+ +PLAL  FQGRL+AG+G  LR+YD+GKK+LLRK ENK F + IV+++T   RI VG
Sbjct: 939  EVDDVPLALLAFQGRLVAGVGKALRIYDIGKKKLLRKVENKTFSSAIVTLSTQGSRIIVG 998

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+QES  F  Y+  EN+L +FADDS PRW+TA+  +D++T+   D+FGNI+  RL   VS
Sbjct: 999  DMQESIQFAVYKPPENRLLVFADDSQPRWITASSMVDYNTIVAGDRFGNIFVNRLDPKVS 1058

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            +++++DPTG  I  E+G L GAP+K + +  FH+GD+VTS+ K SLV GG E ++Y  + 
Sbjct: 1059 EQVDDDPTGAGILHEKGILMGAPHKTKMLAHFHLGDLVTSIHKVSLVAGGREVLMYTGLH 1118

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G ++ F S++DVDF S LE HMR E   L GRD +++R  Y PVK V+DGDLCE + 
Sbjct: 1119 GTIGILVPFVSKEDVDFISTLEQHMRTEQSSLVGRDQLSWRGYYAPVKAVVDGDLCETYA 1178

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIR 1209
             L    Q  IA ELDRT GE+LKKLE++R
Sbjct: 1179 RLPAAKQSSIAGELDRTVGEVLKKLEQLR 1207


>gi|345563727|gb|EGX46712.1| hypothetical protein AOL_s00097g460 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1308

 Score = 1256 bits (3250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1217 (50%), Positives = 827/1217 (67%), Gaps = 36/1217 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
             +LYSLT+QQPT I  AI G FSG K  EIVVA G  L LLRP+ N G++ T+++ ++FG
Sbjct: 121  FFLYSLTIQQPTVITQAILGQFSGQKLQEIVVASGSRLSLLRPDPNVGKVNTILTHDVFG 180

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR LA FRL GS KDYI++GSDSGRI ILEY P++N F ++H ETFGKSG RR+VPGQY
Sbjct: 181  IIRCLAAFRLAGSGKDYIIIGSDSGRITILEYIPTQNKFKRLHLETFGKSGVRRVVPGQY 240

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DP+GRA +I + EK KLVYVLNR+  A LTISSPLEAHK H +V+++C +D G++NP
Sbjct: 241  LACDPRGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHKPHCLVFALCALDVGYENP 300

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFA +E+DYSE DQD TG+A  EA+K+LT+YELDLGLNHV RKWSEPV+  +N L+ VPG
Sbjct: 301  IFAVLEMDYSETDQDPTGEAYREAEKSLTYYELDLGLNHVVRKWSEPVERSSNFLLHVPG 360

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVC+E+ V Y++   P++R  IPRR  A     R   I     H+ +  FFF
Sbjct: 361  GSDGPSGVLVCSEDAVTYRHMNQPELRVPIPRRRGACEDPNRKRFITCGVMHKMRGAFFF 420

Query: 298  LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            LLQ+E GD+FKV L+ D   V  L+IKYFDT+P+  S+C+LKSG+LF ASE GNH  YQF
Sbjct: 421  LLQSEDGDLFKVGLDFDENSVVRLRIKYFDTVPIATSLCILKSGFLFVASENGNHHFYQF 480

Query: 358  QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE 417
            + +G D      + T   +++     +F PR  +NL  +E V+S+  ++D +IANL  ++
Sbjct: 481  EKLGDD-----DNETEFTSDDEINAAYFSPRLAENLALMESVDSMNSLLDCQIANLTNDD 535

Query: 418  APQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFN 477
            APQI+T+CG   RSS R L+ GL VSE+  S+LPG P AVWT K    DE+DAYIV+SF 
Sbjct: 536  APQIYTICGANARSSFRTLKHGLEVSEIVSSELPGGPVAVWTTKLASQDEYDAYIVLSFT 595

Query: 478  NATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTP 537
            N TLVLSIGETVEEV+D+GFL + P+LAV  +G+D L+QVHP GIRHIR D R+NEW  P
Sbjct: 596  NGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDGLLQVHPKGIRHIRADRRVNEWPAP 655

Query: 538  GKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSGDVACLDIASVPEGR 596
              R+IV   +N  QV IALS GE++YFE+D  GQL E E K EMSG V CL +  VPEG+
Sbjct: 656  QHRSIVAASTNSRQVAIALSSGEIVYFELDSDGQLAEYEDKKEMSGTVTCLSLGDVPEGK 715

Query: 597  KRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPA 656
             RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S GG+      +
Sbjct: 716  MRSSFLAVGCDDSTVRILSLDPDSTLESKSVQALTSAPTALRIMSMPDSAGGD---SQRS 772

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
            +LFL+ GL +GV  RTV+D +TG+L+D+R+RFLG +P KLFSV   G  A+L LSS+PWL
Sbjct: 773  TLFLHIGLYSGVYLRTVLDTITGELTDTRTRFLGPQPVKLFSVSAAGTTAILALSSKPWL 832

Query: 717  GYIH-RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
            GY +  G++LLTPLSY++L Y  +FSS+QC EG+V + GN LR+FT+E++ E   + ++P
Sbjct: 833  GYTNGSGQYLLTPLSYQSLTYGCTFSSEQCPEGMVGIQGNNLRIFTVEKISENLQQESIP 892

Query: 776  LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGD 835
            L YTPR+    P      ++ +D   L+ E R                 N  + + +NGD
Sbjct: 893  LSYTPRKMAKHPTAPYFYVVSSDADTLSPESR-----------------NNLIAKAQNGD 935

Query: 836  DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDK 895
                   L   ++GYP+ E   W SC+ V+DP +   T  ++L +NEAA SI  V F  +
Sbjct: 936  STE----LPPSEFGYPRCEG-HWASCVEVVDPINKEVTHKIDLGENEAALSIAVVPFSSQ 990

Query: 896  EHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGR 955
            +    L VGTAK L   P R+   GY H+YR  + GK+++ +HKT++E  PLA   F GR
Sbjct: 991  DDEHFLVVGTAKDLVLNP-RSSSCGYAHVYRLSDGGKTIQFIHKTKLEYAPLAFAAFHGR 1049

Query: 956  LLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDE 1015
            LLAGIG  LR+YDLG K+LLRK +  + PN I  + T  +RI V DIQES  +  Y++ E
Sbjct: 1050 LLAGIGQDLRIYDLGMKQLLRKTQATVAPNLITGLTTQNNRIIVSDIQESVTYVVYKQQE 1109

Query: 1016 NQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWE 1075
            N+L  FADD VPRW T    +D++++AG DKFGN++ VR P   S+E +EDP+ G +  E
Sbjct: 1110 NKLIPFADDMVPRWTTCTALLDYESVAGGDKFGNLWVVRAPPKASEEADEDPSSGYLLHE 1169

Query: 1076 QGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDV 1135
            +  L GAPN++  +  F   DV TS+QK +LV GG + V++  + G++G M+ F SR+DV
Sbjct: 1170 KSYLQGAPNRVNLMSHFFTQDVPTSIQKVNLVAGGRDCVVWSGLQGTIGIMVPFISREDV 1229

Query: 1136 DFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELD 1195
            DFF  LE HMR E  PL GRDH+ YRS Y PVK VIDGDLCE+F  L  D ++ IA ELD
Sbjct: 1230 DFFQTLEQHMRTEDAPLAGRDHLIYRSYYVPVKGVIDGDLCERFALLPYDKKQMIAAELD 1289

Query: 1196 RTPGEILKKLEEIRNKI 1212
            R+  E+ +K+ ++R ++
Sbjct: 1290 RSIREVERKVADMRTRV 1306


>gi|412993390|emb|CCO16923.1| predicted protein [Bathycoccus prasinos]
          Length = 1273

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1273 (49%), Positives = 865/1273 (67%), Gaps = 64/1273 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LY++TLQ+P     AINGNFS  K  EI+ ++G  +ELLRP+  G+++++   E FG 
Sbjct: 1    MHLYNVTLQRPGACQTAINGNFSAPKVQEIIASKGTAIELLRPDQHGKLKSIAFRECFGI 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRS+A FRL G+ KD++V+GSDSGRIV+L ++  KN F+++H+ETFGKSG RR+VPGQ+ 
Sbjct: 61   IRSMAAFRLAGANKDHVVIGSDSGRIVVLRFDAEKNQFEQVHKETFGKSGVRRVVPGQFC 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
             VDPKGRAVM+ A EKQK+VYVLNRD+ A LTISSPLEA+K  TI + +C +D G +NP 
Sbjct: 121  CVDPKGRAVMLAALEKQKVVYVLNRDSQANLTISSPLEANKGKTIAFDVCALDNGLENPG 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            F AIEL Y EAD D TG+AA+EAQK LT+YELDLGLNHV+RKWSEPVDNGAN L+ VPGG
Sbjct: 181  FMAIELFYGEADVDDTGEAAAEAQKMLTYYELDLGLNHVARKWSEPVDNGANKLIPVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGP GV+VC ENF++Y+ + H ++R VIPRR  L AERGVLI S A+HR K  FFF+ Q
Sbjct: 241  SDGPGGVIVCCENFLVYRAEKHEEIRCVIPRRTSLDAERGVLIASFASHRSKNGFFFIAQ 300

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +EYGD +KVTL+  N  VSELK+KYFDT+PV +++CVLK+G+LF  SEFG HAL+QF A+
Sbjct: 301  SEYGDCYKVTLDWTNRKVSELKMKYFDTVPVCSALCVLKTGFLFCGSEFGAHALFQFIAL 360

Query: 361  GADPD-VEASSSTLMETEEG-------------------FQPVFFQPRGLKNLVRIEQVE 400
            G D +  E+SS TL + +                     FQPVFF PR LKNL  I+++E
Sbjct: 361  GDDEESAESSSKTLKKIDNATKKKGRGKNDDEDDEEEDNFQPVFFNPRKLKNLALIDEIE 420

Query: 401  SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
            SL P + +      +EE P++  LCG+GPRS+ R+LR G+ +SEMA S LPG P+ V+T+
Sbjct: 421  SLSPTIALASNISRKEETPRLLALCGQGPRSTFRVLRQGVPLSEMARSPLPGNPNGVFTI 480

Query: 461  KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDD---SLMQV 517
            +K+ +D  DAYIVVSF NATLVLSIG+TVEEV+D+G L T+ +LAVS +GDD   SL+Q+
Sbjct: 481  RKSKSDTTDAYIVVSFTNATLVLSIGDTVEEVTDTGILATSSTLAVSALGDDDDGSLIQI 540

Query: 518  HPSGIRHIREDGR-INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE 576
            HPSG+RH+R + + +NEWR PG++ I     NR Q ++AL+GGEL+YFE+D  GQLLE+E
Sbjct: 541  HPSGVRHVRGNNKGVNEWRAPGRKKITACACNRGQAIVALTGGELVYFELDEAGQLLEIE 600

Query: 577  KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPES 636
            K E S +V  +DI  +P+G  R++F AV  YD+T+R+LSL+P + ++ + VQ+  SPPES
Sbjct: 601  KIETSSEVVSVDIPPIPDGSLRAKFAAVAGYDSTVRVLSLNPGEALRTVGVQATPSPPES 660

Query: 637  LLFLEV--QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
            +L LEV  + +   + G+  P S+FLN GL NG+L R  VD V+G LSD+RSRF+G RPP
Sbjct: 661  VLLLEVNNKTTKNKKAGSSAPPSMFLNVGLSNGILVRCEVDRVSGALSDARSRFVGQRPP 720

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
            KL  + +   +  + LS+RPWLG+   GRF + P  +ET++ A  F+S+Q  EG+V+V  
Sbjct: 721  KLNRIEMNEESGFVALSTRPWLGFNENGRFSIVPACHETIDRACGFASEQVPEGIVAVVD 780

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKK-KLMVIIETDQGALTAEER---EAA 810
             +LR+   E LGE F++++   RYTPR     P    ++ IIETD+G +  E+R   E  
Sbjct: 781  GSLRILACENLGEAFSQSSEKARYTPRAMSTHPDDPDVVAIIETDRGIIGFEDRTGEETR 840

Query: 811  KKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKA---ESDKWVSCIRVLDP 867
             +   EA    +      +  E+ ++++ Y     EQ+G PK+   +++ W SC+ ++D 
Sbjct: 841  NEYIVEAPPAKKPKKNEEEDEEDDEEDDAYQLAPIEQFGAPKSTANDNNNWSSCVHIVDA 900

Query: 868  RSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRF 927
             +A T C+ E+++NE   S+    F  K    LL VG+ K     P R+   G I  YR+
Sbjct: 901  ANAETLCVQEIKNNERLVSVAHAYFA-KADEVLLVVGSVKNFVLQP-RDCDGGMIRCYRY 958

Query: 928  ------------VEEGKS--------LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY 967
                           GKS        LEL+H+T  EG P AL  F+G+LL G+  VLRLY
Sbjct: 959  KRGGGKSSNGETTANGKSGANKAITGLELVHETPCEGAPFALRNFEGKLLVGVDDVLRLY 1018

Query: 968  DLGKKRLLRKCE-NKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQ---LYIFAD 1023
            D GKK+LLRK E  + FP+ I  I    DR +V D  ES  F KY R+++Q   ++IFAD
Sbjct: 1019 DFGKKKLLRKAECAQKFPSFINDIRCSGDRFFVTDACESAFFVKYVREDDQECSMHIFAD 1078

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGK-----IKWEQGK 1078
            D  PR++T+   +D DT+A +DKFGN   +RLP+DVSDEIE D +GGK          G 
Sbjct: 1079 DIAPRYVTSMLPLDRDTVAVSDKFGNFAALRLPKDVSDEIESDISGGKHAALTSSAALGA 1138

Query: 1079 LNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFF 1138
            LNGA NK++   QFHVGDV+ SL K +L  GG E ++Y T+ G+LGA + F+S+D+ DF 
Sbjct: 1139 LNGANNKLQACAQFHVGDVICSLTKCALQTGGSEVIVYATLGGALGAFVPFASKDEADFC 1198

Query: 1139 SHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTP 1198
            +HLEMH+R E PP+ G +H A+RS+YFPVK V+DGDLCEQF  L  D QR+I++E+DRTP
Sbjct: 1199 THLEMHLRIEAPPVLGNEHGAFRSSYFPVKAVVDGDLCEQFGRLGADAQRRISEEMDRTP 1258

Query: 1199 GEILKKLEEIRNK 1211
             EI+K+LE+IR +
Sbjct: 1259 SEIVKRLEQIRAR 1271


>gi|296417673|ref|XP_002838477.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634416|emb|CAZ82668.1| unnamed protein product [Tuber melanosporum]
          Length = 1202

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1220 (50%), Positives = 838/1220 (68%), Gaps = 34/1220 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+ QP+ I  AI G FSG K  EI+VA+G  L LLRP+ + G++ ++++ ++FG
Sbjct: 7    MFMYSLTVLQPSAITQAILGAFSGKKQQEIIVAQGSRLSLLRPDAAQGKVHSVLTIDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR LA FRL GS KDY++VGSDSGRI ILEY P  N F ++H ETFGKSG RR++PGQ+
Sbjct: 67   IIRCLAAFRLAGSSKDYVIVGSDSGRITILEYQPQVNKFHRLHLETFGKSGVRRVIPGQF 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR+  A LTISSPLEAHK H +V+++  +D G+DNP
Sbjct: 127  LACDPKGRACLISSVEKNKLVYVLNRNAQAELTISSPLEAHKPHCLVFALVALDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY E+DQD+TG A    +K L +YELDLGLNHV RKWS+ VD  AN+L  VPG
Sbjct: 187  VFAALEVDYGESDQDATGVAYENIEKMLVYYELDLGLNHVVRKWSDTVDRSANILFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ + Y++ G    R  IPRR  A     R   I+S   H+ +  FFF
Sbjct: 247  GTDGPSGVLVCAEDSIYYRHMGRSTHRVPIPRRRGACEDPNRRRTIISGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            LLQTE GD+ KVTL++D+E  VS +K+KYFDT+P+ +S+C+LKSG+LF ASE GNH  YQ
Sbjct: 307  LLQTEDGDLLKVTLDYDDESGVSRIKVKYFDTVPIASSLCILKSGFLFVASEGGNHHFYQ 366

Query: 357  FQAIGAD-PDVEASSSTLM-ETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
            F+ +G D  ++E SS     +  +   P++F PR  +NL  +E ++S+ P++D +IANL 
Sbjct: 367  FEKLGDDDEEIEFSSDNFSPDPLDRTVPIYFHPRAPENLSLVEAIDSMNPLVDCKIANLT 426

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
            +++APQI+T+CG GPRS+ R L+ GL  +E+  S+LPGVPSAVWT K    DEFDAYIV+
Sbjct: 427  DDDAPQIYTVCGSGPRSTFRTLKHGLETTEIVSSELPGVPSAVWTTKLTNGDEFDAYIVL 486

Query: 475  SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEW 534
            SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+D+L+QVHP GIRHIR D R+NEW
Sbjct: 487  SFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDALLQVHPKGIRHIRADRRVNEW 546

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSGDVACLDIASVP 593
              P  R+IV   +N  QV +ALS GE++YFE+D  GQL E E K EMSG V CL +  VP
Sbjct: 547  PAPQHRSIVAASTNSRQVAVALSSGEIVYFEMDSDGQLAEYEEKKEMSGTVTCLSLGEVP 606

Query: 594  EGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGAD 653
            EGR RS FLAVG  D T+RILSLDPD  ++  SVQ+++S P SL  + +  S        
Sbjct: 607  EGRVRSSFLAVGCDDATVRILSLDPDSTLESKSVQALTSAPSSLCIMSMPDSASE---TS 663

Query: 654  HPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
               +L+L+ GL +GV  RTV+D VTG+L+D+R+RFLG +P K+F V+  G  ++L LSSR
Sbjct: 664  RSLTLYLHIGLYSGVYLRTVLDTVTGELTDTRTRFLGPKPVKIFKVIAQGLPSVLALSSR 723

Query: 714  PWLGYIH-RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNET 772
            PWLGY   RG+F+LTPL+Y  LE+  +FSS+QC EG+V + G  LR+FTIE+L +   + 
Sbjct: 724  PWLGYSDARGQFMLTPLTYPMLEWGWTFSSEQCPEGMVGIQGQNLRIFTIEKLTDNLQQE 783

Query: 773  ALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQME 832
            ++PL YTPR+ +  P + +  + E D   L+   ++                   M+  +
Sbjct: 784  SIPLSYTPRKMLKHPDQPVFYVAEADANTLSVATKQKL-----------------MNSAQ 826

Query: 833  NGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
            NGD     + L+  ++G P+ E   W SCI V+DP S   T  +EL++NEAAFSI  V+F
Sbjct: 827  NGDT----NELAPAEFGNPRGEG-HWASCISVVDPISKEVTQRIELEENEAAFSIAAVSF 881

Query: 893  HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF 952
              ++    L VGT K     P+++   GYIHIYRF+ +GK LE +HKT+V+  PLAL  F
Sbjct: 882  SSQDDEWFLVVGTGKDTCLSPRKS-ANGYIHIYRFLNDGKELEFIHKTKVDEPPLALLGF 940

Query: 953  QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            QGRLLAGIG  L++YDLG K+LLRK + ++ PN I  + T   RI V D+QES  +  Y+
Sbjct: 941  QGRLLAGIGKDLKIYDLGMKQLLRKAQGQVAPNVINGLQTQGSRIIVSDVQESVTYVVYK 1000

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
              +N+L  FADD +PR+ T    +D++T+AG D+FGN + VR PQ  SDE +EDP GG +
Sbjct: 1001 YQDNRLIPFADDMIPRFTTCTTMVDYETVAGGDRFGNFWIVRCPQKASDESDEDPAGGHL 1060

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSR 1132
              E+  L GAPN++  +  F+  D+ TS+QKA LV GG +++++  + G++G M+ F SR
Sbjct: 1061 IHERSYLQGAPNRLNLMCHFYPQDIPTSVQKAQLVTGGRDTLVWTGLQGTIGLMVPFVSR 1120

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIAD 1192
            +DVDFF  LE HMR E  P+ GRDH+ YRS Y PVK VIDGDLCE +  LS D +  IA 
Sbjct: 1121 EDVDFFQTLEQHMRTEDAPIAGRDHLIYRSYYVPVKGVIDGDLCENYSLLSRDKKAMIAA 1180

Query: 1193 ELDRTPGEILKKLEEIRNKI 1212
            ELDR+  E+ +K+ ++R+++
Sbjct: 1181 ELDRSVREVERKIADMRSRV 1200


>gi|328853180|gb|EGG02320.1| hypothetical protein MELLADRAFT_44871 [Melampsora larici-populina
            98AG31]
          Length = 1210

 Score = 1248 bits (3228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1228 (50%), Positives = 858/1228 (69%), Gaps = 42/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLRPENS-GRIETLVSTEIF 58
            M+LY+LTL  P+ I  A  G+FSGT+  +I + RG   LELLRP+ S G++ +++S++ F
Sbjct: 1    MHLYNLTLLPPSAITCATVGSFSGTRQQDICICRGGTRLELLRPDASTGKMNSVISSDAF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G IRSL  FRLTG  KDYI++GSDSGRIV+LE++P  N F K+HQET+GKSG RR+VPGQ
Sbjct: 61   GTIRSLTSFRLTGGTKDYIILGSDSGRIVVLEFDPVLNAFVKVHQETYGKSGARRVVPGQ 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YLA DPKGRAVM+ A EK KLVY+LNRD+AA LTISSPLEAHKS+ I++ I G+D GF+N
Sbjct: 121  YLATDPKGRAVMVAAMEKSKLVYILNRDSAANLTISSPLEAHKSNAIIHHIVGVDVGFEN 180

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P+FAA+E+DY E+DQD TG+A + A+K LT+YELDLGLNHV RKWSEP +  ANML+ VP
Sbjct: 181  PLFAALEVDYGESDQDHTGEAFNSAEKMLTYYELDLGLNHVVRKWSEPTEPRANMLLQVP 240

Query: 239  GGG--------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP---AERGVLIVSAA 287
            GG         DGPSGVLVC E+ +IYK+Q   + R  IP+R + P    ERGV+IV+A 
Sbjct: 241  GGQSATHADKFDGPSGVLVCCEDMIIYKHQNVKEHRVPIPKR-NTPFNDVERGVIIVAAV 299

Query: 288  THRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
             H+ +  FFFL+QTE GD+FKVT++H++E V  LKIKYFDT+PV++S+ +LKSG+LF A+
Sbjct: 300  MHKMRGAFFFLVQTEEGDLFKVTIDHEDEEVQALKIKYFDTVPVSSSLTILKSGFLFVAA 359

Query: 348  EFGNHALYQFQAIGADPD-VEASSSTLME---TEEGFQPVFFQPRGLKNLVRIEQVESLM 403
            E GNH LYQF+ +G D D  E SS    +   ++E     FF+PR L+NLV  +++ESL 
Sbjct: 360  EMGNHYLYQFEKLGDDDDETEFSSEQYPDNGCSDEPLPKAFFKPRPLQNLVLSDELESLA 419

Query: 404  PIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            PI+D + ANL   ++PQI T CGRG RSSLRILR GL VSE+  S LPG P+ VWT K N
Sbjct: 420  PIIDAKAANLLNTDSPQILTSCGRGSRSSLRILRHGLDVSEIVTSDLPGPPTNVWTTKLN 479

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D FD YI++ F NATLVLSIGET+ EVSD+GFL  +P++++  +  + L+Q+HP+GIR
Sbjct: 480  DDDLFDRYIILGFLNATLVLSIGETIVEVSDTGFLTNSPTISIQQLDKNGLLQIHPTGIR 539

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSG 582
            HI  +G + EW+ P  R IV   SN+ QVV+ LSGGELIYFE+D+ GQL E  E+ EM  
Sbjct: 540  HIHLNGGVTEWKVPAGRKIVVSTSNQRQVVVGLSGGELIYFELDLEGQLNEYQEQKEMGS 599

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV 642
             +  L ++ VP+GR+R+ FLA+G  + T++I+SLDP+  ++ +S+Q+++S P S+   E+
Sbjct: 600  TITTLSLSEVPKGRQRTPFLAIGLENLTVQIISLDPNSVLETISLQALTSVPSSICIAEL 659

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
              S   ++      +LF+N GL NGVL RTV+D V GQL+D+R+RFLG RP KL  V V 
Sbjct: 660  LDSSIDKNNE----TLFVNIGLSNGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKVD 715

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
             + +++ LSSR WL Y ++      PL Y++++   SFS++ C EG++ + G++LR+FTI
Sbjct: 716  SKTSVIALSSRTWLNYTYQNMLQFNPLIYDSIDNVHSFSAELCPEGLIGIVGSSLRIFTI 775

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
             +LG    + ++PL YTPR+ +L P  K ++ IE++   ++   + A +    +A G+  
Sbjct: 776  PKLGIKVKQDSMPLSYTPRKMILDPVTKHVITIESEHRTMSPSVK-AERLAEHKAQGLEF 834

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
                         DE+ ++   DE  G P++E  +W SCIR+ DP    T   +EL++NE
Sbjct: 835  -------------DEHIFN---DEVLGLPRSEPGQWASCIRISDPLEKTTLTKIELENNE 878

Query: 883  AAFSICTVNFHDKE-HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            AA S   V+F +++  G LL VGTAK   F   R    GY+ +++F + GK LELLHKT+
Sbjct: 879  AATSAAIVSFANQDLQGPLLVVGTAKD-AFVQPRTCRNGYLSVFKFTDNGKGLELLHKTE 937

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            V+ IP A+  FQGRL AGIG  LR++DLGKK+LLRK ENK F   I S++T   R+ VGD
Sbjct: 938  VDDIPTAIIGFQGRLAAGIGKALRIFDLGKKKLLRKVENKTFSAAISSLSTQGPRLLVGD 997

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
             Q+S  +  Y+  EN+L +FADD  PRW T A  +D+DT AG D+FGN++  R+P+ VSD
Sbjct: 998  AQDSISYAVYKPAENRLLVFADDISPRWTTCATMVDYDTCAGGDRFGNVWVNRIPKTVSD 1057

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            E+++DPTG  I  E+G L GAP+K++ +V FH+ D+ TS++K SLVPGG E ++Y  + G
Sbjct: 1058 EVDDDPTGAGIMHEKGYLMGAPHKVKNLVHFHLNDIPTSMEKTSLVPGGREVLLYTGLQG 1117

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++G ++ F S++DVDFF  LEMHMR E P L GRDH+AYR  YFPVK+ +DGD+CE F  
Sbjct: 1118 TVGILIPFLSKEDVDFFQTLEMHMRSELPSLVGRDHLAYRGYYFPVKNCVDGDMCESFAL 1177

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIR 1209
            L +  Q+++A ELDR+  ++LKK+E +R
Sbjct: 1178 LPMSKQQQVAAELDRSVSDVLKKIEAVR 1205


>gi|17508021|ref|NP_491953.1| Protein TEG-4 [Caenorhabditis elegans]
 gi|351060889|emb|CCD68627.1| Protein TEG-4 [Caenorhabditis elegans]
          Length = 1220

 Score = 1248 bits (3228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1235 (50%), Positives = 839/1235 (67%), Gaps = 42/1235 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGT-KTPEIVVARGKVLELLRPEN-SGRIETLVSTEIF 58
            M+LY+LTLQ  + I  AI GNFSGT K  EIVV RG  LELL  +  +G+I+ +   +IF
Sbjct: 1    MHLYNLTLQGQSAINQAIQGNFSGTPKAQEIVVGRGSALELLTLDTVTGKIKVMCHQDIF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G +RSL  FRLT   +D+I VGSDSGRIVIL+YN  K  F+++HQETFGK+GCRRIVPG 
Sbjct: 61   GIVRSLLAFRLTAGTRDFIAVGSDSGRIVILQYNAEKTCFERLHQETFGKTGCRRIVPGH 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            +L  DP+GRA+MIGA E+QKLVY++NRD+ A LTISSPLEAHK HT+ Y++ GID GF+N
Sbjct: 121  FLVGDPRGRALMIGAVERQKLVYIMNRDSEAHLTISSPLEAHKHHTLCYAMVGIDVGFEN 180

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P FA +E DY +AD D TG+AA   Q+ LTFYELDLGLNHV RK++EP+++  N+L+ VP
Sbjct: 181  PTFACLEFDYEDADNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLNDPGNLLIAVP 240

Query: 239  GGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLF 295
            GG DGPSGV+VC EN+++YKN G  PD+R  IPRR +    A+R +LI++ ATH+ K ++
Sbjct: 241  GGNDGPSGVIVCCENYLVYKNLGDQPDIRCPIPRRRNELDDADRTMLIIATATHKTKNMY 300

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+Q E GDIFKVTLE D + VSE+K+KYFDT+P   ++C+LKSG+LF A+EFGNH LY
Sbjct: 301  FFLVQAENGDIFKVTLETDEDLVSEMKLKYFDTVPPANALCILKSGFLFVAAEFGNHELY 360

Query: 356  QFQAIGADPDVEASSSTLMETEEGF---QPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
            Q  ++G   D E SS+       GF      FF+P  LK+L+ I+ ++SL P+ D  I +
Sbjct: 361  QIASLGEGDDDEFSSAM------GFGENDAAFFEPHELKSLIPIDSMDSLSPLTDAVIGD 414

Query: 413  LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            +  E+A QI++L GRG RSSL++LR GL +SEMAVS LPG P+AVWTVKKN+ D++D+YI
Sbjct: 415  IAREDAAQIYSLVGRGARSSLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYI 474

Query: 473  VVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN 532
            VVSF NATL L+IG+TVEE SDSGFL TTP++  ++IGDDSL+Q++  GIRHIR D RIN
Sbjct: 475  VVSFVNATLALTIGDTVEEASDSGFLPTTPTIGCAMIGDDSLVQIYSEGIRHIRADKRIN 534

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIAS 591
            EW+ P +R IVK   NR QV +AL+GGEL+YFE+D+ G L E  E+   + D+AC+  + 
Sbjct: 535  EWKAPPRRQIVKCAVNRRQVAVALTGGELVYFELDLNGTLNEFTERKLFNADIACMTFSE 594

Query: 592  VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
            + EG   SRFLA+G+ DN +RI+SLDP+D +  LS QS+  PPES+L ++       EDG
Sbjct: 595  ISEGELNSRFLALGTVDNAVRIISLDPNDMLMPLSTQSLPCPPESILLIDTP----NEDG 650

Query: 652  ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
                A++ LN GLQNG LFR  VD VTG + D+R+R+LG RP KLF V   GR+A+LC S
Sbjct: 651  KG-VAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQCQGRSAILCTS 709

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            SR WL Y  + RF LTPLSY  LEYAASF S+QC EG+V+++ + LR+   E+LG  FN 
Sbjct: 710  SRSWLLYHFQRRFHLTPLSYANLEYAASFCSNQCSEGIVAISASTLRIIAAEKLGVAFNV 769

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC---FEAAGMGENGNGNM 828
             +   + TPRR  + P    +++IETD  + T   +   + +     EA    E      
Sbjct: 770  QSFEHKMTPRRVAVHPSMPCLIVIETDHASYTEVTKNIKRNQMAADVEAMASDETEAQLA 829

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
             ++     E + D   +  YG P+A   KW S I ++   S +     EL  +E A  + 
Sbjct: 830  QEIATNLRERRLD---ERVYGAPRAARGKWASAISLISATSGDKLSYFELPQDENAKCVA 886

Query: 889  TVNF--HDKEHGTLLAVGTAKGLQ----------FWPKRNIVAGYIHIYRFVEEGKSLEL 936
             V F  H  E   L+  G  + L             P R    G ++ +     G   + 
Sbjct: 887  LVQFSKHPNEAMVLVGCGVNEVLNVHDIDPNDTSIRPTR----GCVYTFHLSANGDRFDF 942

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDR 996
            LH+T+      A+  F+G  L G G  LR+YD+G+K+LL KCENK FP +IV+I +   R
Sbjct: 943  LHRTETPLPVGAIHDFRGMALVGFGRFLRMYDIGQKKLLAKCENKNFPVSIVNIQSTGQR 1002

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I V D QES HF +YR+ +NQL +FADD+ PR++T    +D+ T+A ADKFGN+  VRLP
Sbjct: 1003 IIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVTCVCVLDYHTVAVADKFGNLAVVRLP 1062

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIY 1116
            + V++++++DPT  K  W++G LNGA  K+E +  F +GD +TSLQK SL+PG  E+++Y
Sbjct: 1063 ERVNEDVQDDPTVSKSVWDRGWLNGASQKVELVSNFFIGDTITSLQKTSLMPGANEALVY 1122

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLC 1176
             T+ G++G +++F S+D+VDFF++LEMH+R E+PPLCGRDH+AYRS Y P K VIDGD+C
Sbjct: 1123 TTIGGAIGCLVSFMSKDEVDFFTNLEMHVRSEYPPLCGRDHLAYRSYYAPCKSVIDGDIC 1182

Query: 1177 EQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            EQF  +    Q+ +A+EL +T  EI KKLE+IR +
Sbjct: 1183 EQFSLMDTQKQKDVAEELGKTVSEISKKLEDIRTR 1217


>gi|268568396|ref|XP_002640241.1| C. briggsae CBR-TAG-203 protein [Caenorhabditis briggsae]
          Length = 1218

 Score = 1242 bits (3214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1231 (50%), Positives = 838/1231 (68%), Gaps = 36/1231 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGT-KTPEIVVARGKVLELLRPEN-SGRIETLVSTEIF 58
            M+LY+LTLQ  T I  AI GNFSG  K+ EIVV RG  LELL+ +  +G+I+ +   +IF
Sbjct: 1    MHLYNLTLQGQTAINQAIQGNFSGLPKSQEIVVGRGSALELLQLDTVTGKIKVMCHQDIF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G +RSL  FRLT   +D+I VGSDSGRIVIL+YNP K  F+++HQETFGK+GCRRIVPG 
Sbjct: 61   G-VRSLLAFRLTAGTRDFIAVGSDSGRIVILQYNPEKTCFERLHQETFGKTGCRRIVPGH 119

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YLA DP+GRA+MIGA E+QKLVY++NRD  A LTISSPLEAHK HT+ Y++ GID GF+N
Sbjct: 120  YLAGDPRGRALMIGAVERQKLVYIMNRDAEAHLTISSPLEAHKQHTLCYAMVGIDVGFEN 179

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P FA +E DY +AD D TG+AA   Q+ LTFYELDLGLNHV RK++EP+ +  N+L+ VP
Sbjct: 180  PTFACLEFDYEDADNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLTDPGNLLIAVP 239

Query: 239  GGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLF 295
            GG +GPSGV+VC EN+++YKN G  PD+R  IPRR +    A+R +LI++ ATH+ K +F
Sbjct: 240  GGNEGPSGVIVCCENYIVYKNLGDQPDIRCPIPRRRNELDDADRTMLIIATATHKTKNMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+Q E GDIFKVTLE D + V+E+K+KYFDT+P   ++C+LK+G+LF A+EFGNH LY
Sbjct: 300  FFLIQAENGDIFKVTLETDEDLVTEMKLKYFDTVPPANALCILKAGFLFVAAEFGNHELY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGF---QPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
            Q  ++G   D E SS+       GF      FF+P  L++L+ I+ ++SL P+ D  I +
Sbjct: 360  QIASLGEGGDDEFSSAM------GFGENDAAFFEPHELRSLIPIDSMDSLSPLTDAVIGD 413

Query: 413  LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            +  E+A Q+FTL GRG RS +++LR GL +SEMAVS LPG P+AVWTVKKN+ D++D+YI
Sbjct: 414  IAREDAAQLFTLVGRGARSHMKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYI 473

Query: 473  VVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN 532
            VVSF NATL L+IG+TVEE SDSGFL TTP++  S+IGDDSL+Q++  GIRHIR D RIN
Sbjct: 474  VVSFVNATLTLTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYSEGIRHIRADKRIN 533

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIAS 591
            EW+ P +R IVK   NR QV +ALSGGEL+YFE+D+ G L E  E+   + D+AC+  + 
Sbjct: 534  EWKAPPRRQIVKCAVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIACMTFSE 593

Query: 592  VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
            + EG   SRFLA+G+ DN +RI+SLDP+D +  LS Q++  PPES+L ++       EDG
Sbjct: 594  ISEGELNSRFLALGTVDNAVRIISLDPNDMLMPLSTQNLPCPPESILLIDTP----NEDG 649

Query: 652  ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
                AS+ LN GLQNG LFR  VD VTG + D+R+R+LG RP KLF V V GR+A+LC S
Sbjct: 650  KG-VASVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRP-KLFKVQVQGRSAILCTS 707

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            SR WL Y  + RF LTPLSY  LEYAASF S+QC EGVV+++ + LR+   E+LG  FN 
Sbjct: 708  SRSWLLYHFQRRFHLTPLSYANLEYAASFCSNQCAEGVVAISASTLRIIAAEKLGVAFNV 767

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC---FEAAGMGENGNGNM 828
             +   + TPRR  + P    +V+IETD  A T   +   + +     E     E      
Sbjct: 768  QSFEHKMTPRRIAVHPTMPCLVVIETDHAAYTEVTKGLKRNQMAQDVEEMASDETEAALA 827

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
             ++     E K D   +  +G P+A   KW S I ++   +       EL  NE A  + 
Sbjct: 828  REIATNLRERKLD---ERVFGAPRAGYGKWASAISLVSATTGEKHSHFELPQNENAKCLA 884

Query: 889  TVNFHDKEHGTLLAVGTA-----KGLQFWPKRN---IVAGYIHIYRFVEEGKSLELLHKT 940
             V F       ++ VG          +  P  +    V G ++ +     G   + LH+T
Sbjct: 885  LVQFSKHPDAVMVLVGCGVNEILNSSEVEPSDSNYRPVRGCVYTFHLSPNGDRFDFLHRT 944

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +      A+  F+G  L G G  LR+YD+G+K+LL KCENK FP  IV+I +   RI V 
Sbjct: 945  ETPLPVGAIHDFRGMALVGFGKFLRMYDIGQKKLLAKCENKNFPVNIVNIQSTGQRIIVS 1004

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D QES HF +YR+ +NQL +FADD+ PR+++    +D+ T+A ADKFGN+  VRLP+ V+
Sbjct: 1005 DSQESVHFLRYRKGDNQLVVFADDTTPRYVSCVCVLDYHTVAIADKFGNLSVVRLPERVN 1064

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            +++++DPT  K  W++G LNGA  K+E +  F +GD +TSLQK SL+PG  E+++Y T+ 
Sbjct: 1065 EDVQDDPTVSKSVWDRGWLNGASQKVELVANFFIGDTITSLQKTSLMPGANEALVYTTIG 1124

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G +++F S+D+VDFF++LEMH+R E+PPLCGRDH++YRS Y P K VIDGD+CEQF 
Sbjct: 1125 GAIGCLVSFMSKDEVDFFTNLEMHVRSEYPPLCGRDHLSYRSYYAPCKSVIDGDICEQFS 1184

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             + L  Q+++A+EL +T  EI KKLE+IR +
Sbjct: 1185 LMELSKQKEVAEELGKTVSEISKKLEDIRTR 1215


>gi|326432370|gb|EGD77940.1| splicing factor 3b subunit 3 [Salpingoeca sp. ATCC 50818]
          Length = 1232

 Score = 1241 bits (3210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1233 (50%), Positives = 832/1233 (67%), Gaps = 35/1233 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            ++LY+LTLQ+   I  A++GNF+GTK   IVV RGK+LELL+P+++ G + +L  TEI+G
Sbjct: 10   VHLYNLTLQKTARINQAVHGNFAGTKQQLIVVGRGKILELLKPDSTTGNLTSLCVTEIYG 69

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RSL  FRLTG  KDY+VVG+DSGRI +LEY+   N+F K+HQETFGKSGCRRIVPGQY
Sbjct: 70   VVRSLQPFRLTGGNKDYLVVGTDSGRITVLEYDTDTNLFKKVHQETFGKSGCRRIVPGQY 129

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRAVMIGA EKQKLVY+ NRD AA LTISSPLEAHKSHTIVY   G+D GFDNP
Sbjct: 130  LAADPKGRAVMIGAFEKQKLVYIFNRDAAAHLTISSPLEAHKSHTIVYDTVGVDVGFDNP 189

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFA +E+DY E D+D TG+A     ++LTFYELDLGLNHV RK S P+D  AN LV+VPG
Sbjct: 190  IFACLEVDYEEVDEDPTGEARQFLTQSLTFYELDLGLNHVVRKESIPLDEFANKLVSVPG 249

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRAD-LPAERGVLIVSAATHRQKTLFFF 297
            G DGP GVLVC+   + ++  G H  V   +PRR D L  +R  L+ +   H+ K +FFF
Sbjct: 250  GSDGPGGVLVCSPGRITWRTYGEHEPVAINLPRRDDPLRTDRAPLVTAVTMHKTKRMFFF 309

Query: 298  LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            L+QTE GD+FK+T+  +   VS L IKYFDT+PV  +MC+L++G LF A+E+GNH LYQ 
Sbjct: 310  LVQTEEGDLFKLTMVAEKGEVSGLIIKYFDTVPVANAMCLLRNGLLFVAAEYGNHHLYQI 369

Query: 358  QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE 417
             ++G + D      + +  +   +  +F+PR L NL  ++  ESL P++  ++A+L EEE
Sbjct: 370  ASLGDNED----EPSYLSIDPLDKIHYFRPRDLLNLALVDDQESLHPMIACQLADLHEEE 425

Query: 418  APQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFN 477
             PQ++ LCGRG +SS R+LR GL VSE+AVS+LPG PSAVW+VK++V+DE D Y+V+SF 
Sbjct: 426  TPQLYALCGRGAKSSFRVLRHGLEVSEVAVSELPGNPSAVWSVKRHVDDESDTYLVLSFV 485

Query: 478  NATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTP 537
            + TLVL IGETVEEV DSGFL+  P+L+ S IGDDSL+QV+P GIRHIR D R+ EW+ P
Sbjct: 486  DKTLVLGIGETVEEVKDSGFLEEVPTLSASRIGDDSLLQVYPGGIRHIRFDQRVKEWKAP 545

Query: 538  GKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPEGR 596
            G   I     N  QVVI LS  EL+YFE+D  GQL E  E+ EM+  V  + +A V E  
Sbjct: 546  GSTAITNCAVNERQVVITLSSNELVYFELDRAGQLNEYTERIEMTSKVTAMALAPVAEDA 605

Query: 597  KRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPA 656
              S+FLA+G  DNT+R+LSLDP  C+Q L +Q++   P SL  +E+    G       P 
Sbjct: 606  FTSQFLALGLEDNTVRVLSLDPSSCLQPLRMQALPGAPSSLCIIEIAGQAG------EPG 659

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
            +L L+ GL NGV+ R+ +D VTG LSDSR+R+LG+R  +LF V   G  A+L LS+RPW+
Sbjct: 660  TLQLHIGLANGVVSRSTMDKVTGDLSDSRTRYLGVREVRLFPVRAHGHPAVLALSTRPWI 719

Query: 717  GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
             + ++G+  + PLSYE LEYA  F S+Q  EG+V+VA N LR+ +++ LG  FN++ +PL
Sbjct: 720  AFTYQGQPRMAPLSYEALEYAHMFCSEQLPEGIVAVAKNTLRILSLQNLGSIFNQSTIPL 779

Query: 777  RYTPRRFVLQPKKKLMVIIETDQGALTAEEREA-----AKKE------CFEAAGMGENGN 825
             YTPR+F L  K  + VIIE DQ  LTA+E++A     AKKE        +        +
Sbjct: 780  AYTPRKFFLDEKTAIAVIIEGDQATLTAQEKKARLSGAAKKEEGDDDMMVDDDDDMMVDD 839

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
             +     NGD      PL  +Q+G P+ E  +W S IRV+D +   T   ++L  +E   
Sbjct: 840  DDEASKPNGDAAPSKPPLDVQQFGEPRVEDGRWASQIRVVDAKEGKTLQTVQLAQDEMLT 899

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFW--PKRNIVAGYIHIYRFVEEGKS-----LELLH 938
            SIC + F   +  T + VG  +G   W   K    + +I  Y F     S     L+ +H
Sbjct: 900  SICKMQFTVSQGFTHVIVGGVRG---WDAKKNTFASAFIDTYLFSAPDGSARLTKLDFVH 956

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            +T+VE +P AL  F GRL+AG+G ++R+YD+G+K+LLRKCENK  P+ +V I     R+ 
Sbjct: 957  RTEVEAMPCALTPFAGRLIAGVGNIVRIYDMGRKKLLRKCENKHLPSRVVDIEVMGTRVV 1016

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            V D +ES  F KY+  EN L +F DD+ PRW TA   +D+ T+  ADKFGN+  +R P D
Sbjct: 1017 VADQRESVFFLKYKPTENVLSVFCDDTTPRWCTAMLMVDYSTVCVADKFGNVSVLRCPDD 1076

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            V+D ++EDP+G K  W +G LNGAP K+ ++  F++G++V SL K +L P G E + Y T
Sbjct: 1077 VTDTLQEDPSGAKAFWARGYLNGAPQKLVQVANFYIGEIVQSLHKTTLTPSGTECIAYTT 1136

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            + GS+GA++ FS ++D +FF  LE+H+RQEHPP+CGRDH+A+RSAY P K VIDGDLCE+
Sbjct: 1137 LSGSIGALMPFSHKEDAEFFQTLELHLRQEHPPICGRDHLAFRSAYVPCKSVIDGDLCEE 1196

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +  LS  L+  IAD L+RTP E+ KKLEE R +
Sbjct: 1197 YNMLSASLKSDIADGLERTPQEVAKKLEEFRTR 1229


>gi|327309050|ref|XP_003239216.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
 gi|326459472|gb|EGD84925.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
          Length = 1209

 Score = 1241 bits (3210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1231 (51%), Positives = 835/1231 (67%), Gaps = 49/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G FSGTK  +IV A G  L L R + S G+++TL S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPSQGKVQTLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY P++N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIVEYVPAQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+E DQD TGQA  E +K L +YELDLGLNHV R+W++PVD  A+ML  VPG
Sbjct: 187  IFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRRWADPVDRTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFF 296
            G DGPSGVLVCAE+ ++Y++      +  IPRR    + P ER   I +   H+ +  FF
Sbjct: 247  GADGPSGVLVCAEDNIVYRHSNQDAFKVPIPRRRGPTENP-ERKRCITAGVMHKMRGAFF 305

Query: 297  FLLQTEYGDIFKVTLE---HDNE----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            FLLQ+E GD+FKVT+E    +NE     V  LK+KYFDT+P+ +S+C+LKSG+LF ASE 
Sbjct: 306  FLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365

Query: 350  GNHALYQFQAIGADPD----VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            GN   YQF+ +G D D    +    S ++   E   PV+F+PR  +NL  +E + SL P+
Sbjct: 366  GNQHFYQFEKLGDDDDEIEFISDDYSAIIS--EPLPPVYFRPRPAENLNLVESIASLNPL 423

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            M   IAN+ EE+APQI+TLCG G RSS R L+ GL VSE+  S+LP VPSAVWT K + N
Sbjct: 424  MAASIANITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSRN 483

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D+FDAYIV+SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI
Sbjct: 484  DQFDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHI 543

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
              D R+NEW  P  R+IV   SN  QV IALS GE++YFE+D  G L E  EK +MSG V
Sbjct: 544  HADQRVNEWPAPQHRSIVAATSNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTV 603

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  
Sbjct: 604  TCLSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMID 663

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S  G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLG++P KLFSV V  +
Sbjct: 664  STSGG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQ 717

Query: 705  AAMLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
             A+L LSSR WLGY  +    F LTPL+Y  LE++ +FSS+QCVEG+V + G  LR+F+I
Sbjct: 718  RAVLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSI 777

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+L     +  +PL YTPR FV  P+  L  +I +D   L+   +         A  + E
Sbjct: 778  EKLDNNLLQEPIPLAYTPRNFVRHPEYPLFYVIGSDNNILSPATK---------AKLLSE 828

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDN 881
            +   N D  E          L  E +GYP+  ++ W S I+V+DP  + +    LEL+DN
Sbjct: 829  STTVNGDSAE----------LPPEGFGYPRG-TNHWASSIQVVDPIHTKSVLSSLELEDN 877

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            EAA SI  V+F  +E  T L VGT K +   P R    G+IHIYRF EEGK LE +HKT+
Sbjct: 878  EAAVSIAAVSFTSQEDETFLVVGTGKDMVVSP-RTFTCGFIHIYRFQEEGKELEFIHKTK 936

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            VE  PLAL  FQGRLLAGIGP LR+YDLG ++LLRKC+ ++ P  IV + T   RI V D
Sbjct: 937  VEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGLQTQGSRIIVSD 996

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  +  Y+  EN L  FADD +PRW T    +D++T+AG DKFGNI+ +R P   S+
Sbjct: 997  VQESVTYVVYKYQENALISFADDIIPRWTTCTTMVDYETVAGGDKFGNIWLLRCPTKASE 1056

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            E +ED +G  +  E+  L GAPN++  ++ F+  D+ TS+QK  LV GG + +++  + G
Sbjct: 1057 EADEDGSGAHLIHERQYLQGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQG 1116

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            ++G  + F +RDDVDFF  LEM +  ++PPL GRDH+ YR  Y P K VIDGDLCE F  
Sbjct: 1117 TVGMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLIYRGYYAPCKGVIDGDLCETFLL 1176

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            L  D ++ IA ELDR+  EI +K+ ++R K+
Sbjct: 1177 LPNDKKQAIAGELDRSVREIERKISDMRTKV 1207


>gi|325096432|gb|EGC49742.1| pre-mRNA-splicing factor Rse1 [Ajellomyces capsulatus H88]
          Length = 1209

 Score = 1238 bits (3204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1228 (50%), Positives = 833/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            +++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+ + G+I TL S ++FG
Sbjct: 7    LFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTHGKIRTLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRALAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGIRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+T A LTISSPLEAHK  T+V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+EADQD TGQA  E +K+L +YELDLGLNHV RKWS+PVD  A+ML  VPG
Sbjct: 187  IFAALEVEYTEADQDPTGQAYEELEKHLVYYELDLGLNHVVRKWSDPVDRSASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSG LVCAE+ + Y++      R  IPRR+      ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRYITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVTL   E DN      VS LK+KYFDT+P+ +S+C+LKSG+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTLDMVEDDNGQITGEVSRLKLKYFDTVPIASSLCILKSGFLFVASETG 366

Query: 351  NHALYQFQAIGADPD-VEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D D +E +S     +  E   P +F+PR  +N+  +E ++SL P+MD 
Sbjct: 367  NHHFYQFEKLGDDDDEIEFTSDAYSADLSEPLPPAYFRPRPYENVNLVESIDSLNPLMDC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +IANL +++APQI+T+CG G RSS R L+ GL V+E+  S+LP VPSAVWT K    DEF
Sbjct: 427  KIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPSVPSAVWTTKLTREDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK  MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRAMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VP GR RS FLAVG  D+T+RILSLDP+  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPRGRARSSFLAVGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMAMSDSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+P KLF V V  + A+
Sbjct: 667  GG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQTAV 720

Query: 708  LCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY H     F+LTPL Y +LE+  +FSS+QCVEG+V + G  LR+F++E+L
Sbjct: 721  LALSSRPWLGYSHLQTKAFMLTPLDYVSLEWGWNFSSEQCVEGMVGIQGQNLRIFSLEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  +PL+YTPR F+  P+  L  +IE +   L+   R                  
Sbjct: 781  ENNLLQETIPLQYTPRHFIKHPEHPLFYVIEAENNILSPGTRTKLL-------------- 826

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEAA 884
             N     NGD      PL  E++GYP+  +  W SCI+++DP  S      +EL++NEAA
Sbjct: 827  -NDSDAVNGDTT----PLPPEEFGYPRG-TGHWASCIQIVDPINSKRVISQIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGT K +   P R+  AG+IHIYRF EEGK LE +HKT+VE 
Sbjct: 881  VSVAAVPFSSQDDETFLVVGTGKDMVVNP-RSCTAGFIHIYRFQEEGKELEFIHKTKVEQ 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P+AL  FQGRLLAGIG  LR+YDLG K++LRKC+  + P+ +V + T   RI V D+QE
Sbjct: 940  PPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASVVPHLVVGLQTQGSRIIVSDVQE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN+L  F DD + RW T    +D++T+AG DKFGN++ +R P   S+E +
Sbjct: 1000 SLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+  L GAPN++  +  F+  D+ TS+QKA LV GG + +++  + G++ 
Sbjct: 1060 EDGSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVWTGLQGTVS 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR++VDFF  LEM +  ++PPL GRDH+ YRS Y P K  IDGDLCE +  L  
Sbjct: 1120 MLIPFISREEVDFFQSLEMQLAAQNPPLAGRDHLIYRSYYAPAKGTIDGDLCETYLLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +++IA ELDR+  EI +K+ ++R ++
Sbjct: 1180 DKKQQIAGELDRSVREIERKIADMRTQV 1207


>gi|326483043|gb|EGE07053.1| pre-mRNA-splicing factor rse1 [Trichophyton equinum CBS 127.97]
          Length = 1209

 Score = 1238 bits (3202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1229 (51%), Positives = 833/1229 (67%), Gaps = 45/1229 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G FSGTK  +IV A G  L L R + + G+++TL S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPAQGKVQTLYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY P++N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIVEYVPAQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+E DQD TGQA  E +K L +YELDLGLNHV R+W++PVD  A+ML  VPG
Sbjct: 187  IFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRRWADPVDRTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFF 296
            G DGPSGVLVCAE+ ++Y++      R  IPRR    + P ER   I +   H+ +  FF
Sbjct: 247  GADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENP-ERKRCITAGVMHKMRGAFF 305

Query: 297  FLLQTEYGDIFKVTLE---HDNE----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            FLLQ+E GD+FKVT+E    +NE     V  LK+KYFDT+P+ +S+C+LKSG+LF ASE 
Sbjct: 306  FLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365

Query: 350  GNHALYQFQAIGADPD-VEASSSTLMET-EEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
            GN   YQF+ +G D D +E  S        E   PV+F+PR  +NL  +E + SL P+M 
Sbjct: 366  GNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
              I N+ EE+APQI+TLCG G RSS R L+ GL VSE+  S+LP VPSAVWT K + ND+
Sbjct: 426  ASITNITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQ 485

Query: 468  FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
            FDAYIV+SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  
Sbjct: 486  FDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 545

Query: 528  DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVAC 586
            D R+NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK +MSG V C
Sbjct: 546  DQRVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTC 605

Query: 587  LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
            L +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S 
Sbjct: 606  LSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDST 665

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
             G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLG++P KLFSV V  + A
Sbjct: 666  SGG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 719

Query: 707  MLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
            +L LSSR WLGY  +    F LTPL+Y  LE++ +FSS+QCVEG+V + G  LR+F+IE+
Sbjct: 720  VLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEK 779

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
            L     +  +PL YTPR FV  P+  L  +I +D   L+   +         A  + E+ 
Sbjct: 780  LDNNLLQEPIPLAYTPRNFVRHPEYPLFYVIGSDNNILSPATK---------AKLLSEST 830

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEA 883
              N D  E          L  E +GYP+  ++ W S I+V+DP  + +    LEL+DNEA
Sbjct: 831  AVNGDSAE----------LPPEDFGYPRG-TNHWASSIQVVDPIHTKSVLSNLELEDNEA 879

Query: 884  AFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE 943
            A SI  V+F  +E  T L VGT K +   P R    G+IHIYRF EEGK LE +HKT+VE
Sbjct: 880  AVSIAAVSFTSQEDETFLVVGTGKDMVVSP-RTFTCGFIHIYRFQEEGKELEFIHKTKVE 938

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
              PLAL  FQGRLLAGIGP LR+YDLG ++LLRKC+ ++ P  IV + T   RI V D+Q
Sbjct: 939  QPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGLQTQGSRIIVSDVQ 998

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            ES  +  Y+  EN L  FADD +PRW T    +D++T+AG DKFGNI+ +R P   S+E 
Sbjct: 999  ESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFGNIWLLRCPTKASEEA 1058

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL 1123
            +ED +G  +  E+  L GAPN++  ++ F+  D+ TS+QK  LV GG + +++  + G++
Sbjct: 1059 DEDGSGAHLIHERQYLQGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTV 1118

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
            G  + F +RDDVDFF  LEM +  ++PPL GRDH+ YR  Y P K VIDGDLCE F  L 
Sbjct: 1119 GMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLIYRGYYAPCKGVIDGDLCETFLLLP 1178

Query: 1184 LDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             D ++ IA ELDR+  EI +K+ ++R K+
Sbjct: 1179 NDKKQAIAGELDRSVREIERKISDMRTKV 1207


>gi|389740093|gb|EIM81285.1| hypothetical protein STEHIDRAFT_86633 [Stereum hirsutum FP-91666 SS1]
          Length = 1213

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1229 (49%), Positives = 829/1229 (67%), Gaps = 42/1229 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ P+    AI GNFSG +  EI+++ G  LELLRP+  +G++  +V++++FG
Sbjct: 1    MHLYNLTLQPPSAATQAIVGNFSGVRAQEIIISHGTRLELLRPDVQTGKLVPVVASDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY +VGSDSGRIVILEY+P  + F K+HQET+GKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGGTKDYAIVGSDSGRIVILEYDPKTSSFVKVHQETYGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VM+ A EK KLVY+LNRD AA LTISSPLEAHK+  I++ I G+D GF+NP
Sbjct: 121  LATDPKGRSVMVAAVEKAKLVYILNRDAAANLTISSPLEAHKNAAIIHHIVGLDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+E+DQD TG+A + A K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  MFAALEVDYTESDQDPTGEAFNNADKVLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE---RGVLIVSAATH 289
            G        DGPSGVLVC E+ +IY++   P  R  IPRR   P E   RG++I SA  H
Sbjct: 241  GQLASSDRYDGPSGVLVCCEDHIIYRHTDVPQHRVPIPRRRH-PLEDPDRGLIITSAVMH 299

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            + K  FFFLLQ+E GD++KVT+EH  E V  +KIKYFDT+PV +S+C+LKSG+LF ASEF
Sbjct: 300  KMKGAFFFLLQSEEGDLYKVTIEHQEEEVKAVKIKYFDTVPVASSLCILKSGFLFVASEF 359

Query: 350  GNHALYQFQAIGADPDVEASSST------LMETEEGFQPVFFQPRGLKNLVRIEQVESLM 403
            GNH LYQFQ +G D +    SST      + +         F+P  L NL   +++ESL 
Sbjct: 360  GNHQLYQFQKLGDDDNEPEFSSTDYPSFGMADPSAALPRAHFRPHPLDNLALADELESLA 419

Query: 404  PIMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
            P++D ++ NL    + PQIFT CGRG RS+ R LR GL V E   S LPG+P+AVWT K 
Sbjct: 420  PVIDSKVMNLLPNSDTPQIFTACGRGARSTFRTLRHGLEVEETVSSDLPGIPNAVWTTKT 479

Query: 463  NVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
              +  +D+YI++SF N TLVLSIGET+EEV D+GFL + P+LAV  IG D+L+QVHP GI
Sbjct: 480  REDAPYDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHGI 539

Query: 523  RHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMS 581
            RH+  D R+NEWR P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M 
Sbjct: 540  RHVLADRRVNEWRVPQGKTIVSATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMG 599

Query: 582  GDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE 641
              V  L I  VPEGR+R+ +LAVG  D T+RI+SLDP+  ++ +S+Q++++PP +L   +
Sbjct: 600  STVLALSIGEVPEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSALCIAD 659

Query: 642  -VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVV 700
             + A +          ++F+N GLQNGVL RTV+D V GQL+D+R+RFLG RP +L  V 
Sbjct: 660  MLDAGINKSQ-----PTMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPVRLIRVQ 714

Query: 701  VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVF 760
            +  + A+L LSSR WL Y H+     TPL ++ L++A SFS++ C EG++ + G+ LR+F
Sbjct: 715  IQHQPAILALSSRTWLNYTHQNLMHFTPLIFDNLDFAWSFSAELCPEGLIGITGSVLRIF 774

Query: 761  TIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGM 820
             + +LG    + ++PL YTPR+F   P      IIE D      +   A  K+  E    
Sbjct: 775  QMPKLGTKLKQDSIPLSYTPRKFASHPSNSYFYIIEADHRVTGPD---ATAKKVAELRSQ 831

Query: 821  GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
            G+  +  M +            L  E +G  KA +  W SCIR++DP    +   + + +
Sbjct: 832  GKMVDDEMLE------------LPAEVFGRSKAPAGTWASCIRIVDPAEGKSVAEIPIDN 879

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAAFS+  V F  + +   L VGTA+   F   R+  +G++  Y+FV++G  LELLHKT
Sbjct: 880  NEAAFSLAIVPFSVRNNEYHLVVGTAQD-TFLAPRSCTSGFLRTYKFVDDGAGLELLHKT 938

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            + + IP++L  FQGRL+AGIG  LR+YD+GKK+LLRK E+K F + I+S+NT   RI VG
Sbjct: 939  ETDDIPMSLLAFQGRLVAGIGKALRIYDIGKKKLLRKAESKTFASAIISLNTQGSRIIVG 998

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+QES  +  Y+  EN+L +FADD+  RW+T +  +D+ T+A  D+FGNI+  RL   VS
Sbjct: 999  DMQESIAYAVYKAPENKLLVFADDTQARWVTCSTMVDYTTVAAGDRFGNIFINRLDSKVS 1058

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            D++++DPTG  I  E+G L GAP+K   +  FHVGD+VTS+ K SLV GG E ++Y  + 
Sbjct: 1059 DQVDDDPTGAGILHEKGILMGAPHKTAMLAHFHVGDLVTSIHKVSLVAGGREVLLYTGLH 1118

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G ++   S++DVDF S LE H+R E   L GRDH+A+R  Y PVK V+DGDLCE F 
Sbjct: 1119 GTIGMLVPLVSKEDVDFISTLEQHIRTEQTSLVGRDHLAWRGYYVPVKAVVDGDLCETFA 1178

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIR 1209
             L    Q  IA ELDRT  E+LKKL+++R
Sbjct: 1179 RLPAAKQSMIAGELDRTVSEVLKKLDQLR 1207


>gi|121700262|ref|XP_001268396.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
 gi|119396538|gb|EAW06970.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
          Length = 1209

 Score = 1236 bits (3198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1228 (50%), Positives = 841/1228 (68%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+ + G+I  + S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPAQGKITPIYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRTLAAFRLAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMIALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DYSE+DQD TG+A  E++K L +YELDLGLNHV RKW++PVD  +NML  VPG
Sbjct: 187  IFAALEVDYSESDQDPTGRAYEESEKVLVYYELDLGLNHVVRKWADPVDRTSNMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            GGDGPSGVLVCAE+ V Y++      +  IPRR  A    ER   IV+   H+ +  FFF
Sbjct: 247  GGDGPSGVLVCAEDSVTYRHSNQDAFKVPIPRRSGATENPERKRTIVAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQT+ GD+FKVT+   E DN      V  LKIKYFDT+PV +++ +LKSG+L+ ASE G
Sbjct: 307  LLQTDDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPVASNLLILKSGFLYVASEGG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D ++E SS +   +      PVFF+PRG +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEEIEFSSESYSADPSVPCDPVFFRPRGAENLNLVESLNSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +IANL E++APQI+ + G G RS+ R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KIANLNEDDAPQIYAVSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRGDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL T P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGSLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVRGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  I    F+LTPL Y  LE+  +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYCDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL YTPRR +  P++ L  +I +D   L+   R    ++            
Sbjct: 781  DNNMLQESIPLSYTPRRLLKHPEQPLFYVIGSDNNVLSPATRARLIEDS----------- 829

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDNEAA 884
                +  NG+     D L  E++GYP+A +  W SCI+V+DP +A      +EL++NEAA
Sbjct: 830  ----KARNGE----ADTLPPEEFGYPRA-TGHWASCIQVVDPVNAKAVISTIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGTAK L   P  +   G+IHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSMAAVPFSSQDDETFLVVGTAKDLTVNPPSS-AGGFIHIYRFQEDGKELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRL+AGIG +LR+YDLG K+LLRKC+  + P TIV + T   RI V D++E
Sbjct: 940  PPLALLAFQGRLVAGIGSILRIYDLGMKQLLRKCQAPVVPKTIVGLQTQGSRIIVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN L  F DD+V RW+T+   +D++T+AG DKFGN++ VR P+ +S+E +
Sbjct: 1000 SVTYVVYKYQENVLIPFVDDTVSRWMTSTTMVDYETVAGGDKFGNLWLVRCPKKISEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L+G PN++E ++  +  D+ TS+ K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLHGTPNRLELMIHTYTQDIPTSVHKTQLVAGGRDILVWTGFQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF +LEM +  + PPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFMSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1180 DTKMMIAAELDRSVREIERKISDMRTRV 1207


>gi|225560964|gb|EEH09245.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus G186AR]
          Length = 1209

 Score = 1236 bits (3198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1228 (50%), Positives = 832/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            +++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+ + G+I TL S ++FG
Sbjct: 7    LFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTHGKIRTLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRALAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGIRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+T A LTISSPLEAHK  T+V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+EADQD TGQA  E +K+L +YELDLGLNHV RKWS+PVD  A+ML  VPG
Sbjct: 187  IFAALEVEYTEADQDPTGQAYEELEKHLVYYELDLGLNHVVRKWSDPVDRSASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSG LVCAE+ + Y++      R  IPRR+      ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRYITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVTL   E DN      VS LK+KYFDT+P+ +S+C+LKSG+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTLDMVEDDNGQITGEVSRLKLKYFDTVPIASSLCILKSGFLFVASETG 366

Query: 351  NHALYQFQAIGADPD-VEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D D +E +S     +  E   P +F+PR  +N+  +E ++SL P+MD 
Sbjct: 367  NHHFYQFEKLGDDDDEIEFTSDAYSADLSEPLPPAYFRPRPYENVNLVESIDSLNPLMDC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +IANL +++APQI+T+CG G RSS R L+ GL V+E+  S+LP VPSAVWT K    DEF
Sbjct: 427  KIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPSVPSAVWTTKLTREDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK  MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRAMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VP GR RS FLAVG  D+T+RILSLDP+  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPRGRARSSFLAVGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMAMSDSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+P KLF V V  + A+
Sbjct: 667  GG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQTAV 720

Query: 708  LCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY H     F+LTPL Y  LE+  +FSS+QCVEG+V + G  LR+F++E+L
Sbjct: 721  LALSSRPWLGYSHLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSLEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  +PL+YTPR F+  P+  L  +IE +   L+   R                  
Sbjct: 781  ENNLLQETIPLQYTPRHFIKHPEYPLFYVIEAENNILSPGTRTKLL-------------- 826

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEAA 884
             N     NGD      PL  E++GYP+  +  W SCI+++DP  S      +EL++NEAA
Sbjct: 827  -NDSDAVNGDTT----PLPPEEFGYPRG-TGHWASCIQIVDPINSKRVISQIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGT K +   P R+  AG+IHIYRF EEGK LE +HKT+VE 
Sbjct: 881  VSVAAVPFSSQDDETFLVVGTGKDMVVNP-RSCTAGFIHIYRFQEEGKELEFIHKTKVEQ 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P+AL  FQGRLLAGIG  LR+YDLG K++LRKC+  + P+ +V + T   RI V D+QE
Sbjct: 940  PPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASVVPHLVVGLQTQGSRIIVSDVQE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN+L  F DD + RW T    +D++T+AG DKFGN++ +R P   S+E +
Sbjct: 1000 SLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+  L GAPN++  +  F+  D+ TS+QKA LV GG + +++  + G++ 
Sbjct: 1060 EDGSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVWTGLQGTVS 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR++VDFF  LEM +  ++PPL GRDH+ YRS Y P K  IDGDLCE +  L  
Sbjct: 1120 MLIPFISREEVDFFQSLEMQLAAQNPPLAGRDHLIYRSYYAPAKGTIDGDLCETYLLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +++IA ELDR+  EI +K+ ++R ++
Sbjct: 1180 DKKQQIAGELDRSVREIERKIADMRTQV 1207


>gi|145240731|ref|XP_001393012.1| pre-mRNA-splicing factor rse1 [Aspergillus niger CBS 513.88]
 gi|134077536|emb|CAK96680.1| unnamed protein product [Aspergillus niger]
          Length = 1209

 Score = 1236 bits (3198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1228 (50%), Positives = 832/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G++  L S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACIIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE+DQD TGQA  E +K+L +YELDLGLNHV RKWS+PVD  A++L  VPG
Sbjct: 187  VFAALEVDYSESDQDPTGQAFDELEKHLVYYELDLGLNHVVRKWSDPVDRTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ V Y++      R  IPRR  A    ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGATENPERKRSITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FK+T+   E DN      V  LKIKYFDT+P+ +S+ +LKSG+L+ ASE G
Sbjct: 307  LLQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPLASSLLILKSGFLYVASEAG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D ++E +S +   +      P++F+PRG +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEEIEFTSESFSADPSVPCDPIYFRPRGAENLNLVETINSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ N+ E++APQI+T+ G G RSS R L+ GL VSE+  S+LP VPSAVWT K   +DEF
Sbjct: 427  KVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRSDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL T P+LAV  +G+DSL+Q+HP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDSDGSLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ++++ P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  +    F+LTPL Y  LE+  +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL YTPRRF+  P++ L  +IE+D   L    R    +             
Sbjct: 781  DNNMLQQSIPLSYTPRRFLKHPEQPLFYVIESDNNVLAPSTRAKLLE------------- 827

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
               D    G DE    P   E +GYP+A +  W SCI+V+DP  A      +EL++NEAA
Sbjct: 828  ---DSKSRGGDETVLPP---EDFGYPRA-TGHWASCIQVVDPLDAKAVVHTIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             SI  V F  ++  T L VGTAK +   P  +   GYIHIYRF E+G+ LE +HKT+VE 
Sbjct: 881  ISIAAVPFTSQDDETFLVVGTAKDMTVNPPGS-AGGYIHIYRFQEDGRELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRL+AGIG +LR+YDLG K+LLRKC+  + P TIV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPVVPKTIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN L  F DDSV RW TA   +D++T AG DKFGN++ +R P+  S+E +
Sbjct: 1000 SVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWLLRCPKKTSEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L G PN++E ++  +  D+ TSL K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLQGTPNRLELMIHVYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F  R+DVDFF +LEM +  +HPPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFIGREDVDFFQNLEMQLAAQHPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1180 DTKMMIAAELDRSVREIERKISDMRTRV 1207


>gi|358366518|dbj|GAA83139.1| nuclear mRNA splicing factor [Aspergillus kawachii IFO 4308]
          Length = 1209

 Score = 1235 bits (3195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1228 (50%), Positives = 834/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G++  L S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACIIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE+DQD TGQA  E +K+L +YELDLGLNHV RKWS+PVD  A++L  VPG
Sbjct: 187  VFAALEVDYSESDQDPTGQAFEELEKHLVYYELDLGLNHVVRKWSDPVDRTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ V Y++      R  IPRR  A    ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGATENPERKRSITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            L+QTE GD+FK+T+   E DN      V  LKIKYFDT+P+ +S+ +LKSG+L+ ASE G
Sbjct: 307  LIQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPLASSLLILKSGFLYVASEAG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D ++E +S     +      P++F+PRG +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEEIEFTSEAFSADPSVPCDPIYFRPRGAENLNLVETINSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ N+ E++APQI+T+ G G RSS R L+ GL VSE+  S+LP VPSAVWT K   +DEF
Sbjct: 427  KVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRSDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL T P+LAV  +G+DSL+Q+HP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDSDGSLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ++++ P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +  KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKAVKLFQVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  +    F+LTPL Y  LE+  +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL YTPRRF+  P++ L  +IE+D   L+   R          A + E   
Sbjct: 781  DNNMLQQSIPLSYTPRRFLKHPEQPLFYVIESDNNVLSPSTR----------AKLLE--- 827

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
               D    G DE    P   E +GYP+A +  W SCI+V+DP  A      +EL++NEAA
Sbjct: 828  ---DSKSRGGDETVLPP---EDFGYPRA-TGHWASCIQVVDPLDAKAVVHTIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             SI  V F  ++  T L VGTAK +   P ++   GYIHIYRF E+G+ LE +HKT+VE 
Sbjct: 881  ISIAAVPFTSQDDETFLVVGTAKDMSVNPPKS-AGGYIHIYRFQEDGRELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRL+AGIG +LR+YDLG K+LLRKC+  + P TIV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPVVPKTIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN L  F DDSV RW TA   +D++T AG DKFGN++ +R P+  S+E +
Sbjct: 1000 SVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWLLRCPKKTSEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L G PN++E ++  +  D+ TSL K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLQGTPNRLELMIHVYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F  R+DVDFF +LEM +  +HPPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFIGREDVDFFQNLEMQLAAQHPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1180 DTKMMIAAELDRSVREIERKISDMRTRV 1207


>gi|410926437|ref|XP_003976685.1| PREDICTED: splicing factor 3B subunit 3-like, partial [Takifugu
            rubripes]
          Length = 1020

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1063 (58%), Positives = 786/1063 (73%), Gaps = 58/1063 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY++TLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNITLQRSTGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIV+GSDSGRIVILEY+ SKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   IIRSLMAFRLTGGTKDYIVIGSDSGRIVILEYHTSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMIGA EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SE ++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFKVTLE D E V+E+++KYFDTIPV  +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++ ESL PIM  +IA+L  
Sbjct: 360  QIAHLG-DDDEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDEQESLSPIMSCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTV+++V DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GD++L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDEALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIV+   N+ QVVIAL+GGEL+YFE+D TGQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+   V  +D    
Sbjct: 598  GEQRSRFLAVGLADNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM-GGVEKQDELGE 656

Query: 655  PAS---LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
              S   L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L +S
Sbjct: 657  KGSMGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMS 716

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            SR WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  FN+
Sbjct: 717  SRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQ 776

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENGNGN 827
             A PL+YTPR+FV+ P+   +V+IE+D  A T    A+ ++   +E  EAAG  E     
Sbjct: 777  VAFPLQYTPRKFVIHPETNNLVLIESDHNAYTEATKAQRKQQMAEEMVEAAGEDERELA- 835

Query: 828  MDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
             +      +EN    L +  +G PKA + +W S +R+++P    T   ++L+ NEAAF  
Sbjct: 836  AEMAAAFLNEN----LPEAIFGAPKAGAGQWASLVRLINPIQGVTLDQVQLEQNEAAFXX 891

Query: 888  CTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
                                                  R V  G+ LE +HKT VE  PL
Sbjct: 892  XX------------------------------------RLVSGGEKLEFVHKTPVEDAPL 915

Query: 948  ALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFH 1007
            A+  FQGR+L G+G +LR+YD+GKK+LLRKCENK  PN + SI+T   R+ V D+QES  
Sbjct: 916  AIAPFQGRVLVGVGKLLRIYDMGKKKLLRKCENKHIPNVVTSIHTSGQRVIVTDVQESLF 975

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
            + +YRR+ENQL IFADD+ PRW+T A  +D+DTMA ADKFGNI
Sbjct: 976  WVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMASADKFGNI 1018


>gi|261196131|ref|XP_002624469.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
 gi|239587602|gb|EEQ70245.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
 gi|239614558|gb|EEQ91545.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis ER-3]
 gi|327356791|gb|EGE85648.1| pre-mRNA-splicing factor rse1 [Ajellomyces dermatitidis ATCC 18188]
          Length = 1209

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1228 (49%), Positives = 836/1228 (68%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            +++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G+I +L S ++FG
Sbjct: 7    LFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKIRSLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRTLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGIRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+T A LTISSPLEAHK  T+V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALAALDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+EADQD TGQA  E +K+L +YELDLGLNHV RKWS+PVD  A ML  VPG
Sbjct: 187  IFAALEVEYAEADQDPTGQAYEELEKHLVYYELDLGLNHVVRKWSDPVDRSATMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSG LVCAE+ + Y++      R  IPRR+      ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRYITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEHVS----ELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E DN  ++     LK+KYFDT+P+ +S+C+LKSG+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVASETG 366

Query: 351  NHALYQFQAIGADPD-VE-ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D D +E  S S   +  E   P +F+PR  +N+  +E + SL P+MD 
Sbjct: 367  NHHFYQFEKLGDDDDEIEFTSDSYSADPSEPLAPAYFRPRPYENVNLVESINSLNPLMDC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ANL +++APQI+T+CG G RSS R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KVANLTDDDAPQIYTICGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTREDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VP+GR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPKGRARSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMSDSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+P KLF V V  + A+
Sbjct: 667  GG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQKAI 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  +    F+LTPL Y  LE+  +FSS+QC+EG+V + G  LR+F++E+L
Sbjct: 721  LALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCIEGMVGIQGQNLRIFSLEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  +PL+YTPR F+  P+  L  +IE D   L+   R            + ++G 
Sbjct: 781  ENNLLQETIPLQYTPRHFIKHPEHPLFYVIEADNNILSPGTRTKL---------LNDSGA 831

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEAA 884
             N D M           L  E++GYP+  +  W SCI+++DP  S +    +EL++NEAA
Sbjct: 832  VNGDAMV----------LPPEEFGYPRG-TGHWASCIQIVDPVNSQSVISQIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGT K +   P R+  AG+I++YRF EEGK LE +HKT+VE 
Sbjct: 881  VSVAAVTFSSQDDETFLVVGTGKDMVVNP-RSSSAGFIYVYRFQEEGKELEFIHKTKVEQ 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P+AL  FQGRLLAGIG  +R+YDLG +++LRKC+  + P+ +V + T   RI V D+QE
Sbjct: 940  PPMALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVVGLQTQGSRIIVSDVQE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN+L  F DD + RW T    +D++T+AG DKFGN++ +R P+  S+E +
Sbjct: 1000 SVTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPEKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+  L GAPN++  +  F+  D+ TS+QKA LV GG + +++  + G++ 
Sbjct: 1060 EDGSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDVLVWTGLQGTVA 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR++VDFF  LEM +  ++PPL GRDH+ YRS Y P K  IDGDLCE +  L  
Sbjct: 1120 MLIPFVSREEVDFFQSLEMQLSSQNPPLAGRDHLIYRSYYAPAKGTIDGDLCETYLLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +++IA ELDR+  EI +K+ ++R K+
Sbjct: 1180 DKKQQIAGELDRSVREIERKIADMRTKV 1207


>gi|298713790|emb|CBJ27162.1| spliceosomal protein sap, putative [Ectocarpus siliculosus]
          Length = 1256

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1269 (49%), Positives = 861/1269 (67%), Gaps = 69/1269 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTK-TPEIVVARGKVLELLRPE-NSGRIETLVSTEIF 58
            M++ SL LQ+  GI A+  GNFSGTK T EI+VARG +LELLR + ++ ++ +++    F
Sbjct: 1    MHVLSLNLQRGGGINASAYGNFSGTKKTEEIMVARGSMLELLRIDPDTDKLVSILQQPAF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              +RSL  FRLT + KDY VVG+D+G++ ILEY P  +    +H ETFGK+GCRRIVPGQ
Sbjct: 61   CVVRSLIAFRLTSTHKDYCVVGTDAGKVTILEYLPETSELKAVHMETFGKTGCRRIVPGQ 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YLA DP+GRA+MI A EKQKLVYVLNRDTA+RL ISSPLEAHKSH I++  CG+D GFDN
Sbjct: 121  YLAADPQGRAIMISAVEKQKLVYVLNRDTASRLAISSPLEAHKSHAIIFHTCGVDVGFDN 180

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            PIFA IELDYSEADQDSTG+ A+  +K L +Y+LDLGLNHV+R WS+P+  GA++L+ VP
Sbjct: 181  PIFAVIELDYSEADQDSTGEEAANTEKQLVYYQLDLGLNHVTRLWSDPISRGASLLLPVP 240

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
            GG  GPSGVLVC EN+V YK+Q HP+VRA +PRR  +P  RG+L+ S   H+Q  LFF L
Sbjct: 241  GGEAGPSGVLVCGENWVAYKHQDHPEVRAPLPRRKTMPTGRGLLVTSGTLHQQPGLFFHL 300

Query: 299  LQTEYGDIFKVTLEHDNEH--VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +Q+E GD++KV+L  ++E   V+++ I+ FDTIPV  S+ + K G LF ASEF NH ++ 
Sbjct: 301  IQSELGDLYKVSLVVNDEQTEVTDISIEVFDTIPVANSLQITKKGKLFCASEFSNHMMFH 360

Query: 357  FQAIG-----------ADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            F  +G           ADP+++ SS    E+     P F     LKNL  +++VESL P+
Sbjct: 361  FHKMGGEEGAVVATQCADPELDDSS----ESAAQVAPTFTPSATLKNLWGLDEVESLAPL 416

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
             DM + +L  E+ PQ++TLCGRG RS+LRILR GLAV+E+A + LPGVPSAV+  K+ + 
Sbjct: 417  TDMLVGDLAREDTPQMYTLCGRGNRSTLRILRHGLAVTELAENDLPGVPSAVFAFKERLT 476

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D++D YIV+SF NAT+VL + ++VEEV +SGFL T+ +L V L+ ++ ++QV+  G+R I
Sbjct: 477  DDYDRYIVLSFTNATMVLEVQDSVEEVENSGFLATSSTLDVKLMANNKILQVYSHGLRVI 536

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQ-LLEVEKHEMSG-D 583
             +     EWR PGK+ I K  +N  QVV+AL+GGE+I+FE+D   Q + EV   ++ G +
Sbjct: 537  MKGQPPQEWRAPGKKQIEKACANERQVVLALAGGEIIFFELDEAMQNIQEVGTKQLGGVE 596

Query: 584  VACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQ 643
            +ACL++  VP+ R R+ FLAVG ++  ++IL L P++ ++ +++ ++  P ESL    + 
Sbjct: 597  IACLEMGEVPKDRVRAPFLAVGDWNGNVKILGLSPENLLEQVAMINLPHPAESLCLAHMA 656

Query: 644  A--SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            A  + GG +       LFL  GL +GV  R  VD   G LSD R RFLG +P KLF + V
Sbjct: 657  AEQAAGGSN-----EQLFLYIGLASGVCQRVAVDATAGTLSDPRQRFLGSKPVKLFRIQV 711

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +  +L LSSR WL Y ++GR+ +TPLSY+ L++AA FS++ C EGVV+V+G  LR+F 
Sbjct: 712  QDKRGVLALSSRSWLSYNYQGRYQMTPLSYDPLDFAAEFSTEMCPEGVVAVSGEKLRIFG 771

Query: 762  IERLGETFNETALPLRYTPRRFVLQP-KKKLMVIIETDQGALTAEEREAAKKECFEAAGM 820
            +ERLGE FN+ ALPL+YTPR+  L P   + +V++E D       + +A KKE  E    
Sbjct: 772  VERLGEVFNQAALPLKYTPRQIALLPGDAQHLVVVEADHNEYNETQGQAVKKEAEEGEKE 831

Query: 821  GENGNGNMDQMENGDDE--NKYDPLSDEQYGYPKAESDK--------------------- 857
               G G  D  ENG  E  +K D  +           D+                     
Sbjct: 832  DPAGGGAGDPAENGKQEEASKGDAAAAGGAAAGAEAMDQDEEEKEVEEEEEDDDEAAAAM 891

Query: 858  -------------WVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVG 904
                         W SCIR+LDP    T   L+L DNEAA S+  V FH++     +AVG
Sbjct: 892  MPIRGPLPPQDGSWASCIRLLDPVEGTTVECLDLDDNEAALSVAPVAFHNRNGEAFVAVG 951

Query: 905  TAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVL 964
            TAK L F P R     ++H+YR +E    L LLHKT+V  +PLA+ +FQGRLL G+G  L
Sbjct: 952  TAKSLTFHP-RGHEGCFVHVYRILE--NRLVLLHKTEVPDVPLAMKEFQGRLLVGVGQSL 1008

Query: 965  RLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD 1024
            R+YDLG+K+LLRKCENK  P+ +VS+    DR++ GD  ES H  KYRR EN+L  FADD
Sbjct: 1009 RMYDLGRKKLLRKCENKRMPSMVVSLTVTGDRVFAGDQMESCHCFKYRRAENRLVEFADD 1068

Query: 1025 SVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPN 1084
             VPR++T    +D+D++AGADKFGNI+ +R+P DVSD+++ +PTG ++ W+ G L+GAPN
Sbjct: 1069 QVPRFMTKTCLLDYDSIAGADKFGNIFVLRVPLDVSDDVD-NPTGNRLLWDSGHLSGAPN 1127

Query: 1085 KMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMH 1144
            K+++ +QFHVG+VV+SL++ +LVPGG E ++Y T+ GS+GA+L F SRDDVDFF+H+EM+
Sbjct: 1128 KVQQQLQFHVGEVVSSLRRTTLVPGGAEVLLYSTINGSIGALLPFKSRDDVDFFTHMEMY 1187

Query: 1145 MRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            MRQE P LCGRDH++YRS Y P KDVIDGDLCEQF +L  + Q+ +A+ LDRT GE++KK
Sbjct: 1188 MRQEKPTLCGRDHISYRSYYLPAKDVIDGDLCEQFSSLPFEKQKLVANGLDRTVGEVVKK 1247

Query: 1205 LEEIRNKIV 1213
            LE+ RN+++
Sbjct: 1248 LEDTRNRLL 1256


>gi|296814646|ref|XP_002847660.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
 gi|238840685|gb|EEQ30347.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
          Length = 1235

 Score = 1232 bits (3187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1222 (51%), Positives = 830/1222 (67%), Gaps = 45/1222 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G FSGTK  +IV A G  L + R E S G+++TL S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFSGTKEQQIVSAAGSKLTIHRTEPSQGKVQTLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY P++N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIVEYVPAQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+E DQDSTGQA  E +K L +YELDLGLNHV RKW++PVD  A+ML  VPG
Sbjct: 187  IFAALEVEYTEVDQDSTGQAYEETEKMLVYYELDLGLNHVVRKWADPVDRTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFF 296
            G DGPSGVLVCAE+ ++Y++      R  IPRR    + P ER   I +   H+ +  FF
Sbjct: 247  GADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENP-ERKRCITAGVMHKMRGAFF 305

Query: 297  FLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            FLLQ+E GD+FK+T+   E +NE     V  LK+KYFDT+P+ +S+C+LKSG+LF ASE 
Sbjct: 306  FLLQSEDGDLFKLTMEMVEDENEQATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365

Query: 350  GNHALYQFQAIGADPD-VE-ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
            GN   YQF+ +G D D +E  S     +  E   PV+F+PR  +NL  +E + SL P+M 
Sbjct: 366  GNQHFYQFEKLGDDDDEIEFISDDYSADLTEPLPPVYFRPRPAENLNLVESIASLNPLMS 425

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
              IANL EE+APQ++TLCG G RSS R L+ GL VSE+  S+LP VPSAVWT K   ND+
Sbjct: 426  CSIANLTEEDAPQLYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQ 485

Query: 468  FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
            +DAYIV+SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  
Sbjct: 486  YDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 545

Query: 528  DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVAC 586
            D R+NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK +MSG V C
Sbjct: 546  DQRVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTC 605

Query: 587  LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
            L +  VPEGR RS FLAVG  D+T+RILSLDP+  ++  SVQ+++S P +L  + +  S 
Sbjct: 606  LSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMSMIDST 665

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
             G        +L+L+ GL +G+  RTV+D VTG+LSD+R+RFLG++P KLF V V  + A
Sbjct: 666  SGG------PTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFGVSVKEQRA 719

Query: 707  MLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
            +L LSSR WLGY  +    F LTPL+Y  LE++ +FSS+QCVEG+V + G  LR+F+IE+
Sbjct: 720  VLALSSRSWLGYSDVQTMSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEK 779

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
            L     + ++PL YT R  V  P+  +  +I +D   L+   +         A  + E+ 
Sbjct: 780  LDNNLLQESIPLAYTSRSLVRHPEYPIFYVIGSDNNVLSPSTK---------AKLLSEST 830

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDNEA 883
              N D  E          L  E +GYP+  ++ W SCI+V+DP +A      +EL+DNEA
Sbjct: 831  TVNGDNAE----------LPPEDFGYPRG-TNHWASCIQVVDPINAKAVMSRIELEDNEA 879

Query: 884  AFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE 943
            A SI  V+F  +E  T L VGT KG+   P R+   G+IHIYRF EEGK LE +HKT+VE
Sbjct: 880  AVSIAAVSFTSQEDETFLVVGTGKGMVVSP-RSFTCGFIHIYRFQEEGKELEFIHKTKVE 938

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
              PLAL  FQGRLLAGIGP LR+YDLG ++LLRKC+ ++ P  IV + T   RI V D+Q
Sbjct: 939  QPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGLQTQGSRIIVSDVQ 998

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            ES  +  Y+  EN L  FADD +PRW T    +D++T+AG DKFGNI+ +R P   S+E 
Sbjct: 999  ESVTYVVYKYQENNLIPFADDIIPRWTTCTTMVDYETVAGGDKFGNIWLLRCPPKASEEA 1058

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL 1123
            +ED +G  +  E+  L GAPN++  +  F+  D+ TS+QK  LV GG + +++  + G++
Sbjct: 1059 DEDGSGAHLIHERQYLQGAPNRLSLVAHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTV 1118

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
            G ++ F +RDDVDFF  LEM +  ++PPL GRDH+ YR  Y P K VIDGDLCE F  L 
Sbjct: 1119 GMLIPFVTRDDVDFFQTLEMQLTSQNPPLAGRDHLIYRGYYAPCKGVIDGDLCETFFLLP 1178

Query: 1184 LDLQRKIADELDRTPGEILKKL 1205
             D ++ IA ELDR+  EI +K+
Sbjct: 1179 NDKKQAIAGELDRSVREIERKI 1200


>gi|403411971|emb|CCL98671.1| predicted protein [Fibroporia radiculosa]
          Length = 1212

 Score = 1231 bits (3186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1232 (50%), Positives = 837/1232 (67%), Gaps = 49/1232 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT I  AI GNFSG++  EI+V+RG  LELLRP+  SG++ T++++++FG
Sbjct: 1    MHLYNLTLQPPTAITHAIAGNFSGSRQQEIIVSRGTRLELLRPDVQSGKVSTVIASDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY VVGSDSGRIVIL+Y+P  + F K+HQET+GKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGGTKDYAVVGSDSGRIVILDYDPKTSSFTKVHQETYGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR+VMI A EK KLVY+LNRD AA LTISSPLEAHK+++I++ I G+D GFDNP
Sbjct: 121  LATDPKGRSVMISAVEKAKLVYILNRDAAANLTISSPLEAHKNNSIIHHIVGLDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYS++DQD TG+A + A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  MFAALEVDYSDSDQDPTGEAFNNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE--RGVLIVSAATHR 290
            G        DGPSGVLVC E+ +IY++   P  R  IPRR    A+  RG++I +A  H+
Sbjct: 241  GQLASSDRYDGPSGVLVCCEDHIIYRHMDAPQHRIPIPRRQHPLADTHRGLIITAAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASM-----CVLKSGYLFA 345
             K  FFFLLQ+E GD++KVT+EH+++ V  LKIKYFDT+P+ AS+     C +   Y+  
Sbjct: 301  MKGAFFFLLQSEEGDLYKVTIEHEDQDVRALKIKYFDTVPI-ASIEYNFNCRICVSYIIL 359

Query: 346  ASEFGNHALYQFQAIGADPDVEASSST------LMETEEGFQPVFFQPRGLKNLVRIEQV 399
             S      LYQFQ +G D +    SST      + +        +F+P  L NL  ++++
Sbjct: 360  ES-----YLYQFQKLGDDDNEPEFSSTSFPSFGMADPSSPLPHAYFKPHILDNLTLVDEM 414

Query: 400  ESLMPIMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVW 458
            ESL P++D ++ NL    + PQ+F  CGRG RS+ R+LR GL V E+  S LPG+P+AVW
Sbjct: 415  ESLSPVLDAKVMNLLPNSDTPQVFAACGRGGRSTFRMLRHGLEVEEVVSSDLPGIPNAVW 474

Query: 459  TVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            T K   +D +D+YI++SF N TLVL IGET+EEV D+GFL + P+LAV  IG D+L+QVH
Sbjct: 475  TTKLKEDDPYDSYIILSFVNGTLVLCIGETIEEVQDTGFLSSAPTLAVQQIGYDALLQVH 534

Query: 519  PSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-K 577
            P GIRH+  D R+NEWR P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +
Sbjct: 535  PHGIRHVLSDKRVNEWRVPQGKTIVAATTNKRQVVVALSSAELVYFELDLDGQLNEYQDR 594

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
              M   V  L IA VPEGR+R+ +LAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++
Sbjct: 595  KAMGSTVLALSIAEVPEGRQRTPYLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAI 654

Query: 638  LFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
               ++   +        P S F+N GLQNGVL RTV+D V GQL+D+R+RFLG RP KL 
Sbjct: 655  CIADM---LDAGINKTQPTS-FVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIKLI 710

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
             V+V     +L LSSR WL Y ++     TPL +E L+YA SFS++ C EG++ ++G+ L
Sbjct: 711  RVLVQRNPGILALSSRSWLNYTYQNLMHFTPLIFENLDYAWSFSAELCPEGLIGISGSVL 770

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
            R+F I +LG    + A+PL YTPR+F+  P   L  +IE D    + E    A  E  + 
Sbjct: 771  RIFQIPKLGTKLKQDAIPLSYTPRKFISHPTNGLFYLIEGDHRVRSDEASAKALGELRQQ 830

Query: 818  AGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
              M +      D++ N         L  E +G  KA +  W SCIR+++P  A T  ++ 
Sbjct: 831  GKMVD------DELVN---------LPPETFGRQKAPAGTWASCIRIINPVDAKTVNIIP 875

Query: 878  LQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELL 937
            L +NEAAFS+  V+F  +     L VGTA+   F   R+  +G++  YRF ++G +LELL
Sbjct: 876  LDNNEAAFSLAVVSFSARSGELHLVVGTAQD-TFLAPRSCTSGFLRTYRFTDDGTNLELL 934

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRI 997
            HKT+   +PLA+  FQGRL+AG+G  LRLYD+GKK+LLRK ENK F + IVS+ T   RI
Sbjct: 935  HKTETNDVPLAVLGFQGRLVAGVGKALRLYDMGKKKLLRKVENKTFASAIVSLATQGSRI 994

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             VGD+QES  F  Y+  EN+L +FADD+ PRW +A   +D++T+A AD+FGNIY  RL  
Sbjct: 995  LVGDMQESVSFAVYKPPENKLLVFADDTQPRWTSAMTMVDYNTVASADRFGNIYVNRLDP 1054

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYG 1117
             VS+++++DPTG  I  E+G L GAP+K E +  FHVGD+VTS+ K SLV GG E ++Y 
Sbjct: 1055 KVSEQVDDDPTGAGILHEKGLLAGAPHKTELLSHFHVGDIVTSINKVSLVAGGREVLLYT 1114

Query: 1118 TVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCE 1177
             + G++G ++ F S++DVDF S LE HMR E   L GRDH+ +R  Y PVK V+DGDLCE
Sbjct: 1115 GLHGTIGILVPFVSKEDVDFISTLEQHMRTEQLSLVGRDHLTWRGYYVPVKAVVDGDLCE 1174

Query: 1178 QFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
             F  L    Q  IA ELDRT GE+LKKLE++R
Sbjct: 1175 TFARLPASKQSAIAGELDRTVGEVLKKLEQLR 1206


>gi|390601867|gb|EIN11260.1| hypothetical protein PUNSTDRAFT_118747 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1214

 Score = 1231 bits (3186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1230 (50%), Positives = 837/1230 (68%), Gaps = 43/1230 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ PT +  AI GNFSG +  EI+V+ G  LELLRP+  +G++ T+++T++FG
Sbjct: 1    MHLYNLTLQPPTAVTQAIVGNFSGARQQEIIVSHGTRLELLRPDPQTGKVATVIATDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY +VGSDSGRIVIL+Y+P  + F K+HQET+GKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGGTKDYAIVGSDSGRIVILDYDPKTSSFVKLHQETYGKSGARRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRAVMIGA EK KLVY+LNRD AA LTISSPLEAHK+  I++ I G+D G++NP
Sbjct: 121  LATDPKGRAVMIGAMEKAKLVYILNRDAAANLTISSPLEAHKNAAIIHHIVGLDVGYENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+E+DQD +G+A + A+K LT+YELDLGLNHV RK SEPVD  AN+LV VPG
Sbjct: 181  MFAALEVDYTESDQDPSGEAFNNAEKMLTYYELDLGLNHVVRKSSEPVDPRANLLVQVPG 240

Query: 240  GG-----DGPSGVLVCAENFVIYKNQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQ 291
            G      DGPSGVL+C E+ +IY++      R  IPRR    D P ERGV+I  A  H+ 
Sbjct: 241  GQTGDRFDGPSGVLICCEDHIIYRHPSGSQHRVPIPRRRHPLDDP-ERGVIITFALMHKI 299

Query: 292  KTLFFFLLQTEYGDIFKVTLEHD-NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            K  FFFLLQ+E GD+FKVT++++ +E V+ LKIKYFDT+PV   +C+LKSG+LF ASEFG
Sbjct: 300  KGDFFFLLQSEEGDLFKVTIDYNGDEDVNALKIKYFDTVPVATGLCILKSGFLFVASEFG 359

Query: 351  NHALYQFQAIGADPDVEASSST------LMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            +H LYQFQ +G D D    SS       +    +     +F+PR L NL  ++ VESL P
Sbjct: 360  DHHLYQFQKLGDDDDEPEFSSADYPQRGMAYPSQALPRAWFRPRPLDNLALLDTVESLSP 419

Query: 405  IMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            I+D R+ NL    + PQIF  CGRG RS+ R LR GL V E   S LPG+P+AVWT K  
Sbjct: 420  IIDARVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEETVSSDLPGIPNAVWTTKLK 479

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D  D+YI++SF N TLVLSIGET+EEV D+GFL + P++AV  IG D+L+QVHP GIR
Sbjct: 480  EDDAHDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTIAVQQIGADALLQVHPQGIR 539

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSG 582
            H+  D R+NEWR P  +TIV   +N+ QVV+ALS  EL+YFE+D+ GQL E + +  M  
Sbjct: 540  HVLADRRVNEWRVPAGKTIVTATTNKRQVVVALSSAELVYFELDLEGQLNEYQDRKAMGS 599

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE- 641
             V  L I  VPEGR+R+ FLAVG  D T+RI+SLDP+  ++ +S+Q++++PP ++   + 
Sbjct: 600  TVLALSIGEVPEGRQRTPFLAVGCEDQTVRIISLDPESTLETISLQALTAPPTAICIADM 659

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            + AS+       HP ++F+N GLQNGVL RTV+D + GQL+D+R+RFLG RP +L  V V
Sbjct: 660  LDASINKV----HP-TMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPVRLIRVNV 714

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
                A+L LSSR WL Y H      TPL +E L++A SFS++ C +G++ +AG+ LR+F 
Sbjct: 715  QRNPAILALSSRSWLNYTHHNLMHFTPLIFENLDFAWSFSAELCPDGLIGIAGSVLRIFQ 774

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I RLG    + A+PL YTPR+F+  P  +   +IE D         EA +K+  E    G
Sbjct: 775  IPRLGTKLKQDAMPLTYTPRKFIPHPANRYFYLIEGDHRTWG---EEAVQKKVAELRQAG 831

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
            +  +  M              L  + +G PKA +  W S IR++DP  A T   + + +N
Sbjct: 832  KQVDEEMLS------------LPADTFGRPKAPAGTWASLIRIIDPVDAKTVATIPIDNN 879

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            E AFSI  V +  +     L VGTA+   F   R+  +G++  Y F  EG  LELLHKT+
Sbjct: 880  ECAFSIAVVPWAARGGELHLVVGTAQD-TFLAPRSCTSGFLRTYAFTNEGAGLELLHKTE 938

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
             + +P+A+  FQGRL+AG+G  LR+YD+GKK+LLRK ENK F   IV++ T   RI VGD
Sbjct: 939  TDDVPMAVMAFQGRLVAGVGKSLRIYDIGKKKLLRKVENKSFATAIVTLATQGSRILVGD 998

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES  +  Y+  EN+L +FADD  PRW++++  +D++T+   D+FGN++  RL   VS+
Sbjct: 999  MQESMAYAVYKPPENRLLVFADDVQPRWISSSTMVDYNTVIAGDRFGNVFVNRLDAKVSE 1058

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            ++++DPTG  I  E+G L GAP+K + +  +HVGD+VTSL K +LVPGG E ++Y  + G
Sbjct: 1059 QVDDDPTGAGILHEKGLLMGAPHKTKMLCHYHVGDIVTSLSKVALVPGGREVILYTGLHG 1118

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPP--LCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            ++G ++ F S++DVDF S LE HMR E     L GRDH+++R  Y PVK V+DGDLCE F
Sbjct: 1119 TIGVLVPFVSKEDVDFISTLEQHMRTELTQFGLVGRDHLSWRGYYVPVKAVVDGDLCEAF 1178

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
             TL    Q  IA ELDRT GE+LKKL+++R
Sbjct: 1179 ATLPAPKQSSIAGELDRTVGEVLKKLDQLR 1208


>gi|154277742|ref|XP_001539706.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
 gi|150413291|gb|EDN08674.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
          Length = 1233

 Score = 1231 bits (3184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1221 (50%), Positives = 827/1221 (67%), Gaps = 43/1221 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            +++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+ + G+I TL S ++FG
Sbjct: 7    LFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTHGKIRTLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRALAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGIRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+T A LTISSPLEAHK  T+V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+EADQD TGQA  E +K+L +YELDLGLNHV RKWS+PVD  A+ML  VPG
Sbjct: 187  IFAALEVEYTEADQDPTGQAYEELEKHLVYYELDLGLNHVVRKWSDPVDRSASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSG LVCAE+ + Y++      R  IPRR+      ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRYITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVTL   E DN      VS LK+KYFDT+P+ +S+C+LKSG+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTLDMVEDDNGQITGEVSRLKLKYFDTVPIASSLCILKSGFLFVASETG 366

Query: 351  NHALYQFQAIGADPD-VEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D D +E +S     +  E   P +F+PR  +N+  +E ++SL P+MD 
Sbjct: 367  NHHFYQFEKLGDDDDEIEFTSDAYSADLSEPLPPAYFRPRPYENVNLVESIDSLNPLMDC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +IANL +++APQI+T+CG G RSS R L+ GL V+E+  S+LP VPSAVWT K    DEF
Sbjct: 427  KIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPSVPSAVWTTKLTREDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK  MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRAMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VP GR RS FLAVG  D+T+RILSLDP+  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPRGRARSSFLAVGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMAMSDSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+P KLF V V  +  +
Sbjct: 667  GG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQTVV 720

Query: 708  LCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY H     F+LTPL Y +LE+  +FSS+QCVEG+V + G  LR+F++E+L
Sbjct: 721  LALSSRPWLGYSHLQTKAFMLTPLDYVSLEWGWNFSSEQCVEGMVGIQGQNLRIFSLEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  +PL+YTPR F+  P+  L  +IE +   L+   R                  
Sbjct: 781  ENNLLQETIPLQYTPRHFIKHPEYPLFYVIEAENNILSPGTRTKLL-------------- 826

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEAA 884
             N     NGD      PL  E++GYP+  +  W SCI+++DP  S      +EL++NEAA
Sbjct: 827  -NDSDTVNGDTT----PLPPEEFGYPRG-TGHWASCIQIVDPINSKRVISQIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGT K +   P R+  AG+IHIYRF EEGK LE +HKT VE 
Sbjct: 881  VSVAAVPFSSQDDETFLVVGTGKDMVVNP-RSCTAGFIHIYRFQEEGKELEFIHKTMVEQ 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P+AL  FQGRLLAGIG  LR+YDLG K++LRKC+  + P+ +V + T   RI V D+QE
Sbjct: 940  PPMALLGFQGRLLAGIGTDLRIYDLGMKQMLRKCQASVVPHLVVGLQTQGSRIIVSDVQE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN+L  F DD + RW T    +D++T+AG DKFGN++ +R P   S+E +
Sbjct: 1000 SLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+  L GAPN++  +  F+  D+ TS+QKA LV GG + +++  + G++ 
Sbjct: 1060 EDGSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVWTGLQGTVS 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR++VDFF  LEM +  ++PPL GRDH+ YRS Y P K  IDGDLCE +  L  
Sbjct: 1120 MLIPFISREEVDFFQSLEMQLAAQNPPLAGRDHLIYRSYYAPAKGTIDGDLCETYLLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKL 1205
            D +++IA ELDR+  EI +K+
Sbjct: 1180 DKKQQIAGELDRSVREIERKI 1200


>gi|350630003|gb|EHA18376.1| hypothetical protein ASPNIDRAFT_38018 [Aspergillus niger ATCC 1015]
          Length = 1219

 Score = 1230 bits (3183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1224 (50%), Positives = 828/1224 (67%), Gaps = 43/1224 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G++  L S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACIIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE+DQD TGQA  E +K+L +YELDLGLNHV RKWS+PVD  A++L  VPG
Sbjct: 187  VFAALEVDYSESDQDPTGQAFDELEKHLVYYELDLGLNHVVRKWSDPVDRTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ V Y++      R  IPRR  A    ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGATENPERKRSITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FK+T+   E DN      V  LKIKYFDT+P+ +S+ +LKSG+L+ ASE G
Sbjct: 307  LLQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPLASSLLILKSGFLYVASEAG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D ++E +S +   +      P++F+PRG +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEEIEFTSESFSADPSVPCDPIYFRPRGAENLNLVETINSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ N+ E++APQI+T+ G G RSS R L+ GL VSE+  S+LP VPSAVWT K   +DEF
Sbjct: 427  KVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRSDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL T P+LAV  +G+DSL+Q+HP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDSDGSLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ++++ P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  +    F+LTPL Y  LE+  +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL YTPRRF+  P++ L  +IE+D   L    R    +             
Sbjct: 781  DNNMLQQSIPLSYTPRRFLKHPEQPLFYVIESDNNVLAPSTRAKLLE------------- 827

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
               D    G DE    P   E +GYP+A +  W SCI+V+DP  A      +EL++NEAA
Sbjct: 828  ---DSKSRGGDETVLPP---EDFGYPRA-TGHWASCIQVVDPLDAKAVVHTIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             SI  V F  ++  T L VGTAK +   P  +   GYIHIYRF E+G+ LE +HKT+VE 
Sbjct: 881  ISIAAVPFTSQDDETFLVVGTAKDMTVNPPGS-AGGYIHIYRFQEDGRELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRL+AGIG +LR+YDLG K+LLRKC+  + P TIV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLVAGIGSLLRIYDLGMKQLLRKCQAPVVPKTIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN L  F DDSV RW TA   +D++T AG DKFGN++ +R P+  S+E +
Sbjct: 1000 SVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWLLRCPKKTSEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L G PN++E ++  +  D+ TSL K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLQGTPNRLELMIHVYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F  R+DVDFF +LEM +  +HPPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFIGREDVDFFQNLEMQLAAQHPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEI 1208
            D +  IA ELDR+  EI +K+  I
Sbjct: 1180 DTKMMIAAELDRSVREIERKISCI 1203


>gi|159486547|ref|XP_001701300.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
            [Chlamydomonas reinhardtii]
 gi|158271783|gb|EDO97595.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
            [Chlamydomonas reinhardtii]
          Length = 1078

 Score = 1230 bits (3182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1223 (51%), Positives = 817/1223 (66%), Gaps = 155/1223 (12%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LYSLTL + +GI  A+ GNFSG K  E+VV+RGKVLELLRP  +G+++T+V+TE+FG 
Sbjct: 1    MFLYSLTLSRASGIQTAVYGNFSGPKAQEVVVSRGKVLELLRPNENGKMQTVVATEVFGQ 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSLA  RLTGS  D++ +GSDSGRIV++++N  KNV+ K+HQETFG+SGCRRIVPGQ+L
Sbjct: 61   IRSLAAVRLTGSTTDHLAIGSDSGRIVLIKFNKDKNVWVKVHQETFGRSGCRRIVPGQFL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRA M+GA EKQK VYVLNRD AA LTISSPLEAHKSH I +SICG+DCGFDNPI
Sbjct: 121  AVDPKGRACMVGAVEKQKFVYVLNRDAAANLTISSPLEAHKSHHITFSICGMDCGFDNPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIELDYSEADQD TG+AAS AQK+LTFYE+DLGLN+V RKW+EPVDNGAN+L+ VPGG
Sbjct: 181  FAAIELDYSEADQDPTGEAASLAQKHLTFYEMDLGLNNVVRKWTEPVDNGANLLIAVPGG 240

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGP GVL             H +VRAVIPRR+DLP +RGVLIVS ATH++K   FFL+Q
Sbjct: 241  ADGPGGVL------------DHEEVRAVIPRRSDLPGDRGVLIVSYATHKKKAYSFFLVQ 288

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +EYGDI+KVTL ++ E V+E+K+KYFDTIPVTAS+ VLK+G+LFAASE+GNHALYQF   
Sbjct: 289  SEYGDIYKVTLSYEGEAVTEVKVKYFDTIPVTASIAVLKTGFLFAASEYGNHALYQFVGT 348

Query: 361  GADPD-VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            G D D VE+SS+ L+ TEEGFQPVFF+PR LKNL+ I+++ SLMPI DM++ANL  EE P
Sbjct: 349  GEDDDDVESSSAQLVATEEGFQPVFFEPRPLKNLLLIDEMASLMPITDMKVANLLGEEIP 408

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QI+ LCGRGPR+SL +LRPGLAV+E+AVS LPG P+AVWTV++  +DE+DAYIVVSF NA
Sbjct: 409  QIYALCGRGPRASLSVLRPGLAVTELAVSPLPGAPTAVWTVRRAASDEYDAYIVVSFANA 468

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
            TLV SIGE V+E ++SGFL T P+L   L+ D+S++QV+P G+RHIR D RINEW+ PG+
Sbjct: 469  TLVFSIGEEVKETNESGFLGTVPTLHTQLLADNSMLQVYPGGLRHIRPDRRINEWKVPGR 528

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            R I    SN  QV IAL GGE                                       
Sbjct: 529  RVIKAAASNDKQVAIALQGGE--------------------------------------- 549

Query: 600  RFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
                VG+YD T+RILS DP   ++ L+VQ+++S PESLL L    +V         A   
Sbjct: 550  ----VGTYDQTVRILSTDPGAGLKNLAVQALNSVPESLLMLY---NVARARSGPARAGCS 602

Query: 660  LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYI 719
               G + G          +GQ   S  R                     CL++  W    
Sbjct: 603  CTWGCRTGC--------SSGQRDGSTCR--------------------RCLTTH-WT--- 630

Query: 720  HRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYT 779
                   TP    +    A F+SDQC EG V+V  + LR+  +E +G+ FN  A      
Sbjct: 631  -------TPRVGGSRRMVAGFASDQCPEGFVAVVKSTLRILAVENVGDAFNTQA------ 677

Query: 780  PRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENK 839
                                       R AA  E        E G   +  +E  D+   
Sbjct: 678  ---------------------------RLAALAE--------EQGGAPVQGVEFNDELAA 702

Query: 840  YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFH------ 893
             +    EQ+G PK  + +W  C+R+++P S +T  + E+ +NEA  S+C           
Sbjct: 703  LE----EQFGPPKGAAGQWAGCLRIVEPSSLSTVFVTEMDNNEALVSMCLAELRMPGGMG 758

Query: 894  --DKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG-IPLALC 950
                   T+L VGTA+GL++ P  +  A YI +YR  + G+ L+LLHKTQV+G +P AL 
Sbjct: 759  AGPTGMETVLLVGTARGLRYMPT-DCEAAYIRVYRLGDGGRRLDLLHKTQVDGGVPGALA 817

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
             F+GRLLAG+GP LRLYD+GKK++LRKCE   + N  + +  YR   Y    QES H  +
Sbjct: 818  GFKGRLLAGVGPTLRLYDMGKKKMLRKCEYNRWTNIFLHVFFYRP--YFRSSQESVHMMR 875

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            Y++ +N  YIFADD  PR+L+A   +D+DT+A  DKFGN+  +RLPQ+ S ++E+DPTGG
Sbjct: 876  YKKADNAFYIFADDVAPRYLSALLPLDYDTIATGDKFGNLVILRLPQEASQQVEDDPTGG 935

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFS 1130
            K+    GKLNGAP+K+EE+V+FHVGD +T+LQ+A +  GG E ++Y TVMG++G +  F+
Sbjct: 936  KMAAASGKLNGAPHKLEELVKFHVGDTITALQRAEMQAGGQEVLVYSTVMGAIGVVYPFT 995

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
            SR+DVDFFSHLEMH+RQE+PPL GRDH+AYRSAYFPV++ +DGDLC Q+ ++ +  Q+ I
Sbjct: 996  SREDVDFFSHLEMHLRQENPPLAGRDHLAYRSAYFPVRNCVDGDLCSQYASIPMKKQQMI 1055

Query: 1191 ADELDRTPGEILKKLEEIRNKIV 1213
            A+ +DRT GE+LKKLE+IRNKI+
Sbjct: 1056 AEAMDRTTGEMLKKLEDIRNKIL 1078


>gi|331221690|ref|XP_003323519.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309302509|gb|EFP79100.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1213

 Score = 1230 bits (3182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1231 (50%), Positives = 851/1231 (69%), Gaps = 45/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARG-KVLELLRPE-NSGRIETLVSTEIF 58
            M+LY+LT+  P+ I  A  G+FSGT+  +I V+RG   LELLRP+  +G++ ++VSTE+F
Sbjct: 1    MHLYNLTILPPSAITCATVGSFSGTRQQDICVSRGGSRLELLRPDPTTGKLSSVVSTEVF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G IR+L+ FRLTG  KDYI++ SDSGRIV+LE++PS N F K+HQET+GKSG RR+VPGQ
Sbjct: 61   GTIRALSSFRLTGGTKDYIILASDSGRIVVLEFDPSSNTFIKLHQETYGKSGARRVVPGQ 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YLA DPKGRAVMI A EK KLVY+LNRD+AA LTISSPLEAHKS+ I++ I G+D GF+N
Sbjct: 121  YLATDPKGRAVMIAAIEKSKLVYILNRDSAANLTISSPLEAHKSNAIIHHIVGVDVGFEN 180

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P+FAA+E+DY EADQD TG+A + A+K LT+YELDLGLNHV RKWSEP +  ANML+ VP
Sbjct: 181  PLFAALEVDYGEADQDPTGEAFNLAEKMLTYYELDLGLNHVVRKWSEPTEPRANMLLQVP 240

Query: 239  GGG--------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP---AERGVLIVSAA 287
            GG         DGPSGV+VC E+ +IYK+Q   + R  IP+R D P     +GV+IV+A 
Sbjct: 241  GGQSTSHPDKFDGPSGVIVCCEDLLIYKHQNAKEHRVPIPKR-DSPFSDPAQGVIIVAAV 299

Query: 288  THRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
             H+ +  FFFL+Q+E GD+FKVT++H++E V  LKIKYFDT+PV +++ +LKSG+LF A+
Sbjct: 300  MHKMRGAFFFLIQSEEGDLFKVTIDHEDEEVQALKIKYFDTVPVASNLSILKSGFLFVAA 359

Query: 348  EFGNHALYQFQAIGAD-PDVEASSSTLME---TEEGFQPVFFQPRGLKNLVRIEQVESLM 403
            E GNHALYQF+ +G D  + E SS+   E   +       FF+PRGL+NLV  +++ESL 
Sbjct: 360  ETGNHALYQFEKLGDDDEETEFSSADYPEFGASGAALPGAFFKPRGLENLVLSDELESLA 419

Query: 404  PIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            PI   +  +L   ++ Q    CG G RSSLR+LR GL VSE+  S+LPG P+ VWT +  
Sbjct: 420  PITGAKTGHLLNSDSAQTVASCGTGSRSSLRMLRHGLEVSEIVTSELPGPPTNVWTTRLA 479

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
              DEFD YI++ F NATLVL+IGET+ EV+D+G L  +P++A+  +  + L+Q+HP+GIR
Sbjct: 480  ETDEFDRYIILGFLNATLVLAIGETIVEVADTGLLTNSPTIAIQQLDSNGLLQIHPTGIR 539

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSG 582
            HI  DG I EW+ P  R IV   SNR QVVI LSGGELIYFE+D+ GQL E  E+ EM  
Sbjct: 540  HIHLDGAITEWKVPPGRKIVVSTSNRRQVVIGLSGGELIYFELDLDGQLNEYQEQKEMGA 599

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV 642
             +  L ++ V +GR+R+ FLA+G  + T++I+SLDP+  ++ +S+Q++++ P S+   E+
Sbjct: 600  TITSLSLSEVSKGRQRTPFLAIGLENLTVQIISLDPNSVLETISLQALTAVPTSICIAEL 659

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
              S   ++      +LF+N GL NGVL RTV+D V GQL+D+R+RFLG RP KL  V V 
Sbjct: 660  LDSSIDKNSE----TLFVNIGLANGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKVD 715

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
             + +++ LSSR WL Y  +      PL Y+ ++   SFS++ C EG++ + G++LR+FTI
Sbjct: 716  NKTSVIGLSSRTWLNYTFQNLLHFDPLIYDAIDNVHSFSAELCPEGLIGIVGSSLRIFTI 775

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
             +LG    + A+PL YTPR+ +L P  K ++ IE++   + A   +A +    +A G+  
Sbjct: 776  PKLGVKVKQDAMPLAYTPRKMLLDPSSKHVITIESEHRTM-APGVKAERLALHKAQGL-- 832

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
                   Q+    DE+  D    + +G P+AE+ KW SCIR+ DP    T    +L DNE
Sbjct: 833  -------QV----DESLLD---QDAFGVPRAEAGKWASCIRISDPIEKTTLVREDLGDNE 878

Query: 883  AAFSICTVNF----HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
            AA S+  V+F    H      LL VG+AK   F   R    G++ +YRFV +GK++EL+H
Sbjct: 879  AATSLAIVSFAFAAHHPATEPLLVVGSAKD-AFVQPRTCKNGFLRVYRFVNDGKAIELVH 937

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            KT+V+ +P AL  FQGRL AG+G  LR+YDLGKK+LLRK ENK F + I+S++    RI 
Sbjct: 938  KTEVDEMPSALVGFQGRLAAGVGKALRIYDLGKKKLLRKVENKSFGSAIISLSVQGSRIL 997

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD Q+S  +  Y+  EN+L +FADD VPRW T A  +D+DT+AG D+FGN++  RLP++
Sbjct: 998  VGDSQDSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDRFGNLWVSRLPKN 1057

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            VSDE++EDPTG  I  E+G L GAP+K++ +V FH+ D+ TS+QK SLVPGG E ++Y  
Sbjct: 1058 VSDEVDEDPTGAGIMHEKGYLMGAPHKLKNLVHFHLNDIPTSIQKTSLVPGGREVLLYTG 1117

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            V GS+G ++ F S++DVDFF  LEMHMR E P L GRDH+AYR  YFPVK+ +DGDLCE 
Sbjct: 1118 VQGSIGILVPFISKEDVDFFQTLEMHMRNEMPSLVGRDHLAYRGYYFPVKNCVDGDLCES 1177

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            F  L    Q ++A ELDR+  ++LKK+E +R
Sbjct: 1178 FALLPSAKQLQVASELDRSVSDVLKKIEAVR 1208


>gi|295666353|ref|XP_002793727.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278021|gb|EEH33587.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1209

 Score = 1229 bits (3181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1228 (50%), Positives = 831/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            +++YSLT+Q PT I  AI G F+GTK  +I+ A G  L + RP+   G+I TL S ++FG
Sbjct: 7    LFMYSLTIQPPTAITQAILGQFAGTKEQQIITASGSKLTIHRPDPTQGKIRTLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL G  KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRTLAAFRLAGGSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGIRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+T A LTISSPLEAHK  T+V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+EADQD TGQA  E +K L +YELDLGLNHV RKWS+PVD  A ML  VPG
Sbjct: 187  IFAALEVEYTEADQDPTGQAYEELEKQLVYYELDLGLNHVVRKWSDPVDRSATMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSG LVCAE+ + Y++      R  IPRR+      ER   IV+   H+ +  FFF
Sbjct: 247  GADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRCIVAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEHVS----ELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E DN  ++     LK+KYFDT+P+ +S+C+LKSG+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVASETG 366

Query: 351  NHALYQFQAIGADPD-VEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D D +E +S +      E   PV+F PR  +N+  +E V SL P+MD 
Sbjct: 367  NHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVESVNSLNPLMDC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQI+T+CG G RSS R L+ GL V+E+  S+LP VPSAVWT K    DEF
Sbjct: 427  KITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKLTREDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VP+GR RS FLAVG  D+T+RILSLDPD  +   SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPKGRARSSFLAVGCDDSTVRILSLDPDSTLGNKSVQALTSAPSALSIMAMADSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+P KLF V V  + A+
Sbjct: 667  GG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQKAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  +    F+LTPL Y  LE+  +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  + L YTPR+F+  P++ L  +IE D   L+   R     +         NG+
Sbjct: 781  ENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRAKLLNDSDAV-----NGD 835

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEAA 884
              +              L  E +GYP+  +  W SCI+++DP  S +    +EL++NEAA
Sbjct: 836  ATV--------------LPSEDFGYPRG-TGHWASCIQIVDPVNSKSVVSQIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V+F  ++  T L VGT K +   P R+  AG+IHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSVAAVSFSSQDDETFLVVGTGKDMVVNP-RSCSAGFIHIYRFQEDGKELEFIHKTKVEQ 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P+AL  FQGRLLAGIG  +R+YDLG +++LRKC+  + P+ +V + T   RI V D+QE
Sbjct: 940  PPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVVGLQTQGSRIIVSDVQE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN+L  F DD + RW T    +D++T+AG DKFGN++ +R P   S+E +
Sbjct: 1000 SVTYVVYKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+  L GAPN++  +  F+  D+ TS+QKA LV GG + +++  + G++G
Sbjct: 1060 EDGSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVWTGLQGTVG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR++VDFF  LEM +  ++PPL GRDH+ YRS Y P K  IDGDLCE +  L  
Sbjct: 1120 MLIPFISREEVDFFQSLEMQLAAQNPPLAGRDHLIYRSYYAPAKGTIDGDLCETYLLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +++IA ELDR+  EI +K+ ++R K+
Sbjct: 1180 DKKQQIAGELDRSVREIERKIADMRTKV 1207


>gi|331238007|ref|XP_003331659.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309310649|gb|EFP87240.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1213

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1231 (50%), Positives = 850/1231 (69%), Gaps = 45/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARG-KVLELLRPE-NSGRIETLVSTEIF 58
            M+LY+LT+  P+ I  A  G+FSGT+  +I V+RG   LELLRP+  +G++ ++VSTE+F
Sbjct: 1    MHLYNLTILPPSAITCATVGSFSGTRQQDICVSRGGSRLELLRPDPTTGKLSSVVSTEVF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G IR+L+ FRLTG  KDYI++ SDSGRIV+LE++PS N F K+HQET+GKSG RR+VPGQ
Sbjct: 61   GTIRALSSFRLTGGTKDYIILASDSGRIVVLEFDPSSNTFIKLHQETYGKSGARRVVPGQ 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YLA DPKGRAVMI A EK KLVY+LNRD+AA LTISSPLEAHKS+ I++ I G+D GF+N
Sbjct: 121  YLATDPKGRAVMIAAIEKSKLVYILNRDSAANLTISSPLEAHKSNAIIHHIVGVDVGFEN 180

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P+FAA+E+DY EADQD TG+A + A+K LT+YELDLGLNHV RKWSEP +  ANML+ VP
Sbjct: 181  PLFAALEVDYGEADQDPTGEAFNLAEKMLTYYELDLGLNHVVRKWSEPTEPRANMLLQVP 240

Query: 239  GGG--------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP---AERGVLIVSAA 287
            GG         DGPSGV+VC E+ +IYK+Q   + R  IP+R D P     +GV+IV+A 
Sbjct: 241  GGQSTSHPDKFDGPSGVIVCCEDLLIYKHQNAKEHRVPIPKR-DSPFSDPAQGVIIVAAV 299

Query: 288  THRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
             H+ +  FFFL+Q+E GD+FKVT++H++E V  LKIKYFDT+PV +++ +LKSG+LF A+
Sbjct: 300  MHKMRGAFFFLIQSEEGDLFKVTIDHEDEEVQALKIKYFDTVPVASNLSILKSGFLFVAA 359

Query: 348  EFGNHALYQFQAIGAD-PDVEASSSTLME---TEEGFQPVFFQPRGLKNLVRIEQVESLM 403
            E GNHALYQF+ +G D  + E SS+   E   +       FF+PRGL+NLV  +++ESL 
Sbjct: 360  ETGNHALYQFEKLGDDDEETEFSSADYPEFGASGAALPGAFFKPRGLENLVLSDELESLA 419

Query: 404  PIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            PI   +  +L   ++ Q    CG G RSSLR+LR GL VSE+  S+LPG P+ VWT +  
Sbjct: 420  PITGAKTGHLLNSDSAQTVASCGTGSRSSLRMLRHGLEVSEIVTSELPGPPTNVWTTRLA 479

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
              DEFD YI++ F NATLVL+IGET+ EV+D+G L  +P++A+  +  + L+Q+HP+GIR
Sbjct: 480  ETDEFDRYIILGFLNATLVLAIGETIVEVADTGLLTNSPTIAIQQLDSNGLLQIHPTGIR 539

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSG 582
            HI  DG I EW+ P  R IV   SNR QVVI LSGGELIYFE+D+ GQL E  E+ EM  
Sbjct: 540  HIHLDGAITEWKVPPGRKIVVSTSNRRQVVIGLSGGELIYFELDLDGQLNEYQEQKEMGA 599

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV 642
             +  L ++ V +GR+R+ FLA+G  + T++I+SLDP+  ++ +S+Q++++ P S+   E+
Sbjct: 600  TITSLSLSEVSKGRQRTPFLAIGLENLTVQIISLDPNSVLETISLQALTAVPTSICIAEL 659

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
              S   ++      +LF+N GL NGVL RTV+D V GQL+D+R+RFLG RP KL  V V 
Sbjct: 660  LDSSIDKNSE----TLFVNIGLANGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKVD 715

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
             + +++ LSSR WL Y  +      PL Y+ ++   SFS++ C EG++ + G++LR+FTI
Sbjct: 716  NKTSVIGLSSRTWLNYTFQNLLHFDPLIYDAIDNVHSFSAELCPEGLIGIVGSSLRIFTI 775

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
             +LG    + A+PL YTPR+ +L P  K ++ IE++   + A   +A +    +A G+  
Sbjct: 776  PKLGVKVKQDAMPLAYTPRKMLLDPSSKHVITIESEHRTM-APGVKAERLALHKAQGL-- 832

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
                   Q+    DE+  D    + +G P+AE+ KW SCIR+ DP    T    +L DNE
Sbjct: 833  -------QV----DESLLD---QDAFGVPRAEAGKWASCIRISDPIEKTTLVREDLGDNE 878

Query: 883  AAFSICTVNF----HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
            AA S+  V+F    H      LL VG+AK   F   R    G++ +YRFV +GK +EL+H
Sbjct: 879  AATSLAIVSFAFAAHHPATEPLLVVGSAKD-AFVQPRTCKNGFLRVYRFVNDGKVIELVH 937

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            KT+V+ +P AL  FQGRL AG+G  LR+YDLGKK+LLRK ENK F + I+S++    RI 
Sbjct: 938  KTEVDEMPSALVGFQGRLAAGVGKALRIYDLGKKKLLRKVENKSFGSAIISLSVQGSRIL 997

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD Q+S  +  Y+  EN+L +FADD VPRW T A  +D+DT+AG D+FGN++  RLP++
Sbjct: 998  VGDSQDSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDRFGNLWVSRLPKN 1057

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            VSDE++EDPTG  I  E+G L GAP+K++ +V FH+ D+ TS+QK SLVPGG E ++Y  
Sbjct: 1058 VSDEVDEDPTGAGIMHEKGYLMGAPHKLKNLVHFHLNDIPTSIQKTSLVPGGREVLLYTG 1117

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            V GS+G ++ F S++DVDFF  LEMHMR E P L GRDH+AYR  YFPVK+ +DGDLCE 
Sbjct: 1118 VQGSIGILVPFISKEDVDFFQTLEMHMRNEMPSLVGRDHLAYRGYYFPVKNCVDGDLCES 1177

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            F  L    Q ++A ELDR+  ++LKK+E +R
Sbjct: 1178 FALLPSAKQLQVASELDRSVSDVLKKIEAVR 1208


>gi|317143715|ref|XP_001819645.2| pre-mRNA-splicing factor rse1 [Aspergillus oryzae RIB40]
          Length = 1209

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1228 (50%), Positives = 834/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT +  AI G F+GTK  +IV A G  L + RP+   G++  L S ++FG
Sbjct: 7    MFMYSLTIQPPTAVTQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMSALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DYSE+DQD TGQA  EA+K L +YELDLGLNHV RKW++PVD  ++ML  VPG
Sbjct: 187  IFAALEVDYSESDQDPTGQAYEEAEKLLVYYELDLGLNHVVRKWADPVDRTSSMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ V Y++      R  IPRR+      ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGPTENPERKRFITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FK+ +   E DN      V  LKIKYFDT+PV +S+ +LKSG+L+ ASE G
Sbjct: 307  LLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILKSGFLYVASEAG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D ++E SS     +     +P++F+PR  +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVETINSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ANL EE+APQI+T+ G G RS+ R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+Q+HP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIMAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ++++ P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ A+
Sbjct: 667  GG------TALYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  I    F+LTPL Y  LE+  +FSS+QC+EG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++ L YTPRRF+  P++ L  +IE+D   L+   R    ++     G      
Sbjct: 781  DNNMLQQSISLAYTPRRFLKHPEQPLFYVIESDNNVLSPSTRAKLLEDSKARTG------ 834

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
                      DE    P   E++GYP+  S  W SCI+V+DP  A      +EL++NEAA
Sbjct: 835  ----------DETVLPP---EEFGYPRG-SGHWASCIQVVDPVHAKAVVSTIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGTAK +   P  +   GYIHIYRF E+G+ LE +HKT+VE 
Sbjct: 881  VSVAAVPFTSQDDETFLVVGTAKDMNVNPPSS-AGGYIHIYRFQEDGRELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRL+AGIGP+LR+YDLG K+LLRKC  ++ P TIV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQVVPKTIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN L  F DDSV RW T+   +D++T AG DKFGNI+ +R P+ +S++ +
Sbjct: 1000 SVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNIWMLRCPKKISEQAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L+G PN++E ++  +  D+ T+L K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLHKTQLVAGGRDILVWSGFHGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF +LEM +  ++PPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFVSREDVDFFQNLEMQLAAQNPPLAGRDHLIYRSYYAPVKGVIDGDLCETYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1180 DTKMMIAAELDRSVREIERKISDMRTRV 1207


>gi|225683909|gb|EEH22193.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb03]
          Length = 1209

 Score = 1228 bits (3177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1228 (50%), Positives = 831/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            +++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G+I TL S ++FG
Sbjct: 7    LFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKIRTLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL G  KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRTLAAFRLAGGSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGIRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+T A LTISSPLEAHK  T+V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+EADQD TGQA  E +K L +YELDLGLNHV RKWS+PVD  A ML  VPG
Sbjct: 187  IFAALEVEYTEADQDPTGQAYEELEKQLVYYELDLGLNHVVRKWSDPVDRSATMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSG LVCAE+ + Y++      R  IPRR+      ER   IV+   H+ +  FFF
Sbjct: 247  GADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRCIVAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEHVS----ELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E DN  ++     LK+KYFDT+P+ +S+C+LKSG+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVASETG 366

Query: 351  NHALYQFQAIGADPD-VEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D D +E +S +      E   PV+F PR  +N+  +E V SL P+MD 
Sbjct: 367  NHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVENVNSLNPLMDC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQI+T+CG G RSS R L+ GL V+E+  S+LP VPSAVWT K    DEF
Sbjct: 427  KITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKLTREDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VP+GR RS FLAVG  D+T+RILSLDPD  +   SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPKGRARSSFLAVGCDDSTVRILSLDPDSTLGNKSVQALTSAPSALSIMAMADSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+P KLF V V  + A+
Sbjct: 667  GG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQKAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  +    F+LTPL Y  LE+  +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  + L YTPR+F+  P++ L  +IE D   L+   R     +         NG+
Sbjct: 781  ENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRTKLLNDSDAV-----NGD 835

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEAA 884
              +              L  E +GYP+  +  W SCI+++DP  S +    +EL++NEAA
Sbjct: 836  ATV--------------LPPEDFGYPRG-TGHWASCIQIVDPVNSKSVVSQIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V+F  ++  T L VGT K +   P R+  AG+IHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSVAAVSFSSQDDETFLVVGTGKDMVVNP-RSCSAGFIHIYRFQEDGKELEFIHKTKVEQ 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P+AL  FQGRLLAGIG  +R+YDLG +++LRKC+  + P+ +V + T   RI V D+QE
Sbjct: 940  PPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVVGLQTQGSRIIVSDVQE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  ++  EN+L  F DD + RW T    +D++T+AG DKFGN++ +R P   S+E +
Sbjct: 1000 SVTYVVFKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+  L GAPN++  +  F+  D+ TS+QKA LV GG + +++  + G++G
Sbjct: 1060 EDGSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVWTGLQGTVG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR++VDFF  LEM +  ++PPL GRDH+ YRS Y P K  IDGDLCE +  L  
Sbjct: 1120 MLIPFISREEVDFFQSLEMQLAAQNPPLAGRDHLIYRSYYAPAKGTIDGDLCETYLLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +++IA ELDR+  EI +K+ ++R K+
Sbjct: 1180 DKKQQIAGELDRSVREIERKIADMRTKV 1207


>gi|347829304|emb|CCD45001.1| similar to pre-mRNA-splicing factor rse1 [Botryotinia fuckeliana]
          Length = 1212

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1230 (50%), Positives = 835/1230 (67%), Gaps = 48/1230 (3%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFGA 60
            +LYSLT+  PT I  AI G F+GTK  +IV A G  L L RP+ S G+I T +S ++FG 
Sbjct: 8    FLYSLTINPPTAITQAILGQFAGTKEQQIVTASGSRLTLHRPDPSQGKIITALSHDVFGI 67

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IR++A FRL GS KDYI++ SDSGRI I+E+ P++N F+++H ETFGKSG RR+VPGQYL
Sbjct: 68   IRAIAAFRLAGSNKDYIIITSDSGRITIVEFVPAQNKFNRLHLETFGKSGVRRVVPGQYL 127

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRA +  + EK KLVYVLNR++ A LTISSPLEAHK+ T+V+++  +D G+ NP+
Sbjct: 128  AVDPKGRACLTASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALVALDVGYANPV 187

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAA+E+DY E+DQD TGQA  E +K L +YELDLGLNHV RKWSEPVD  AN+L  VPGG
Sbjct: 188  FAALEIDYGESDQDPTGQAYDEIEKQLVYYELDLGLNHVVRKWSEPVDRTANILFQVPGG 247

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TLF 295
             DGPSGVLVC E+ + Y++      R  IPRR  A    +R   IV+   H+ K     F
Sbjct: 248  TDGPSGVLVCGEDNITYRHSNQEAFRVAIPRRRGATEDPQRKRNIVAGVMHKLKGAAGAF 307

Query: 296  FFLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
            FFLLQT+ GD+FK+T+   E DN      V  LKIKYFDT+PV  S+C+LKSG+LF ASE
Sbjct: 308  FFLLQTDDGDLFKITIEMVEDDNGQPTGEVRRLKIKYFDTVPVATSLCILKSGFLFVASE 367

Query: 349  FGNHALYQFQAIGADPDVEASSSTLMET--EEGFQPVFFQPRGLKNLVRIEQVESLMPIM 406
            FGNH  YQF+ +G D +     S    T   E + P++F PR  +NL  +E ++S+ P+M
Sbjct: 368  FGNHQFYQFEKLGDDDEETEFVSDDFPTGAHESYTPIYFHPRPAENLSLVESIDSMNPLM 427

Query: 407  DMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
            D ++ANL +E+APQI+++CG G RS+ R L+ GL VSE+  S+LPGVPSAVWT K    D
Sbjct: 428  DCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPGVPSAVWTTKLTRGD 487

Query: 467  EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
             +DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHIR
Sbjct: 488  TYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIR 547

Query: 527  EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVA 585
             D R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V 
Sbjct: 548  ADHRVNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGTVT 607

Query: 586  CLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQAS 645
            CL +  VPEGR+RS+FLAVG  D+T+RILSLDPD  ++  SVQ+++SPP +L  + +  S
Sbjct: 608  CLSLGEVPEGRQRSQFLAVGCDDSTVRILSLDPDSTLENKSVQALTSPPNALSIMAMSDS 667

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
              G       ++L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ 
Sbjct: 668  SSGG------STLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVAVQGQT 721

Query: 706  AMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            A+L LSSRPWLGY   + +G F+LTPL Y  LE+  +FSS+QC EG+V + G  LR+F+I
Sbjct: 722  AVLALSSRPWLGYSDPVTKG-FMLTPLDYPALEWGWNFSSEQCTEGMVGIQGQNLRIFSI 780

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+L +   + ++PL YTPRRFV  P+     +IE D   L+     A K++  E   +  
Sbjct: 781  EKLTDNLLQESIPLTYTPRRFVRHPEHACFYVIEADNNILSP----ATKQKLLEDPSV-T 835

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDN 881
            NG+  +              L  E++GYP+  ++ W SCI V+DP +       + L+DN
Sbjct: 836  NGDATV--------------LPPEEFGYPRG-TNHWASCISVVDPVTEKKVLSTIHLEDN 880

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            E A SI  V F  +E  T L VGT K +   P R+  AG+IH+YRF E+GK LE +HKT+
Sbjct: 881  ECAVSIAVVAFASQEDETFLCVGTGKDMVVSP-RSFSAGFIHVYRFHEDGKELEFIHKTK 939

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            VE  P+AL  FQGRLLAG+G  LR+YDLG ++LLRK ++++ PN IV + T   RI V D
Sbjct: 940  VEEPPMALLAFQGRLLAGVGKDLRIYDLGMRQLLRKAQSEVAPNMIVGLQTQGSRIIVSD 999

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES     Y+  EN+L  F DD++ RW +    +D++T+AG DKFGN++ +R P   S+
Sbjct: 1000 VQESITMVVYKFQENRLIPFVDDTIARWTSCTTMVDYETVAGGDKFGNLWLLRCPAKASE 1059

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            E +E+ +G  +  E+  L GAP+++  +      D+  S+QK +LV GG + +++  + G
Sbjct: 1060 EADEEGSGAHLLHERQYLAGAPHRLTLMAHNFSQDIPMSIQKTNLVAGGRDCLLWSGLQG 1119

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            +LG ++ F SR+DVDFF  LE H+R E PPL GRDH+ YRS Y PVK VIDGDLCE++  
Sbjct: 1120 TLGILIPFVSREDVDFFQTLEQHLRSEDPPLAGRDHLIYRSYYVPVKGVIDGDLCERYTL 1179

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1180 LPTDKKQMIAGELDRSVREIERKISDIRTR 1209


>gi|242772631|ref|XP_002478075.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
            10500]
 gi|218721694|gb|EED21112.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1209

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1230 (50%), Positives = 836/1230 (67%), Gaps = 47/1230 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT +  AI G F+GTK  +IV A G  L + RP+ + G++  + + ++FG
Sbjct: 7    MFMYSLTIQNPTAVTQAILGQFAGTKEQQIVTASGSKLTIHRPDAAQGKVTPIYTQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK+ T+V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALTALDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAAIE+DYSE DQD TG+A  E +K L +YELDLGLNHV R+WS+ +D  +N+L  VPG
Sbjct: 187  IFAAIEVDYSECDQDPTGRAYEEVEKQLVYYELDLGLNHVVRRWSDVIDRTSNILFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFF 296
            G DGPSGVLVCAE+ + Y++      R  IPRR    + P ER   I +   H+ +  FF
Sbjct: 247  GADGPSGVLVCAEDSITYRHSNQDAFRVPIPRRRGPTENP-ERKRSITAGVMHKMRGAFF 305

Query: 297  FLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            FLLQTE GD+FK+T+   E DN      V  LKIKYFDT+P+  ++ +LKSG+LF ASE 
Sbjct: 306  FLLQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPIATNLLILKSGFLFVASET 365

Query: 350  GNHALYQFQAIGADPDVEA---SSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIM 406
            GNH  YQF+ +G D D E    S     +  +   PV+F  R  +NL  +E V SL PIM
Sbjct: 366  GNHHFYQFEKLG-DDDEETEFPSDDVSADLADPIIPVYFNVRDAENLNLVESVNSLNPIM 424

Query: 407  DMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
            D +I +L  E+APQI+T+CG G RS+ R L+ GL VSE+  S+LP VPSAVWT K    D
Sbjct: 425  DCKITDLLAEDAPQIYTICGTGARSTFRTLKHGLDVSEIVESELPSVPSAVWTTKLTRKD 484

Query: 467  EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
            EFDAYIV+SF N TLVLSIGETVEEV+D+GFL T P+LAV  +G+DSL+QVHP GIRHI 
Sbjct: 485  EFDAYIVLSFTNGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPKGIRHIL 544

Query: 527  EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVA 585
             D R+NEW  P  RTIV   +N  QV +ALS GE++YFE+D  G L E  EK +MSG V 
Sbjct: 545  ADHRVNEWPAPQHRTIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVT 604

Query: 586  CLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQAS 645
             L +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S
Sbjct: 605  SLSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSMADS 664

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
              G       ++L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G++
Sbjct: 665  TSGG------STLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFGVSVKGQS 718

Query: 706  AMLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIE 763
            A+L LSSRPWLGY  I    F+LTPL Y  LE+  +FSS+QC+EG+V + G  LR+F+IE
Sbjct: 719  AVLALSSRPWLGYSDIQTKSFMLTPLDYVGLEWGWNFSSEQCLEGMVGIQGQNLRIFSIE 778

Query: 764  RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGEN 823
            +L     + ++PL YTPR FV  P++ L  +IE++   L      A +    E +     
Sbjct: 779  KLDNNVLQESIPLAYTPRHFVKHPEQPLFYVIESENNVLAP----ATQTRLLEDS----- 829

Query: 824  GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNE 882
                  +++NG  E    P   E +G+P+A +  W SCI V+DP  S +    LEL++NE
Sbjct: 830  ------KLQNG--EAVIPPA--ETFGFPRA-TGHWASCIEVVDPINSKSVLSRLELEENE 878

Query: 883  AAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
            +A S+  V+F  +++ T L VGT K +  +P R+  AG+IHIYRF E+G+ LE +HKT++
Sbjct: 879  SAVSVAAVSFASQDNETFLVVGTGKDVVTYP-RSFSAGFIHIYRFQEDGRELEFIHKTKI 937

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDI 1002
            E  PLAL  FQGRL+AGIG  LR+YDLG K++LRKC+ +  PN IV + T   RI V D+
Sbjct: 938  EEPPLALLAFQGRLVAGIGKNLRVYDLGMKQMLRKCQVEASPNLIVGLQTQGSRIIVSDV 997

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
            QES  +  Y+  ENQL  F DD + RW TA   +D++T AG DKFGN++ VR P+ VS+E
Sbjct: 998  QESVTYVVYKYQENQLIPFVDDVIARWTTATTMVDYETTAGGDKFGNLWLVRCPKKVSEE 1057

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGS 1122
             +ED +G  +  E+  L G PN+++ +V F+  D+ TSL K +LV GG + +++  + G+
Sbjct: 1058 SDEDGSGAHLIHERSYLQGTPNRLDLMVHFYTQDIPTSLHKTNLVVGGRDILVWTGLQGT 1117

Query: 1123 LGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL 1182
            +G M+ F SR+DVDFF +LEM +  ++PPL GR+H+ YRS Y PVK VIDGDLCE +  L
Sbjct: 1118 IGMMIPFISREDVDFFQNLEMQLASQNPPLAGREHLIYRSYYVPVKGVIDGDLCESYFLL 1177

Query: 1183 SLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
              D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1178 PNDKKLMIAGELDRSVREIERKISDMRTRV 1207


>gi|339259094|ref|XP_003369733.1| splicing factor 3B subunit 3 [Trichinella spiralis]
 gi|316965959|gb|EFV50595.1| splicing factor 3B subunit 3 [Trichinella spiralis]
          Length = 1241

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/1241 (51%), Positives = 843/1241 (67%), Gaps = 88/1241 (7%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY++TLQ+PT I  AI+GNFSG K  EI V+RG +LELL+P+  +G++  ++S E FG
Sbjct: 56   MHLYNITLQKPTSIYNAISGNFSGVKLQEICVSRGHLLELLKPDPMTGKLSVIISHECFG 115

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL+ FRLTGS KDYIVVGSDSGRIVILEY P KN+F K+HQETFGKSGCRRIVPGQY
Sbjct: 116  IIRSLSSFRLTGSSKDYIVVGSDSGRIVILEYIPDKNIFTKVHQETFGKSGCRRIVPGQY 175

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            L VDPKGRA+MIGA EKQKLVY++NRD+AARLTISSPLEAHKS +I + I G+D GF+NP
Sbjct: 176  LTVDPKGRAIMIGATEKQKLVYIMNRDSAARLTISSPLEAHKSQSICFQIVGVDVGFENP 235

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY E   DS      +A + LTFYELDLGLNHV RK++EP+D  AN L+ VPG
Sbjct: 236  LFACLEVDYEEI--DSVNTEVGKAIQTLTFYELDLGLNHVVRKYAEPLDYFANHLIAVPG 293

Query: 240  GGDGPSGVLVCAENFVIYKNQGHP-DVRAVIP-RRADLP-AERGVLIVSAATHRQKTLFF 296
            G +GPSGV++C EN++IYKN G   DVR  IP RR DL   +RG+L+           FF
Sbjct: 294  GSEGPSGVILCCENYIIYKNLGEQLDVRCPIPRRRNDLEDPDRGILV---------NAFF 344

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            FLLQTE GDIFKVTLE  ++ V+E+KIKYFDT+PV  S+C+LKSG+L          LYQ
Sbjct: 345  FLLQTEQGDIFKVTLEVFDDIVTEIKIKYFDTLPVANSICMLKSGFL---------NLYQ 395

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               +G D D E   S+LM  +EG    FF PRGL+NL++++++ SL PIM   +A++  E
Sbjct: 396  IAKLG-DNDDETEFSSLMPLDEG-DTFFFAPRGLQNLIQVDELLSLSPIMSFEVADIVYE 453

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
            + PQ++  CGRGPRSS+++LR GL V+EMA+S+LPG P+AVWTVKK+ + E+DAYIVVSF
Sbjct: 454  DTPQLYAACGRGPRSSIKVLRHGLEVTEMAISELPGNPNAVWTVKKHQDAEYDAYIVVSF 513

Query: 477  NNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRT 536
             NATLVLSIGETVEEV+DS  L                +Q++P GIRHIR D R+NEW+ 
Sbjct: 514  VNATLVLSIGETVEEVTDSVVLGVVD------------VQIYPEGIRHIRCDRRVNEWKV 561

Query: 537  PGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPEG 595
            PG+R I     N  QV+IAL+GGE++YFE+D  GQL E  E+ EM  DV  + +A +P G
Sbjct: 562  PGRRVITNCAVNCRQVLIALNGGEIVYFELDEGGQLNEYTERKEMPCDVVAMALADIPPG 621

Query: 596  RKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHP 655
              R RFLAV   D T+R++SLDP DC+  L++QS+ +  +SL      A+VGG+      
Sbjct: 622  EIRCRFLAVALTDRTVRVISLDPSDCLTPLNMQSLPAMAQSLCI----AAVGGD---TME 674

Query: 656  ASLFLNAGLQ-----NGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA---- 706
            ++LFLN GL+     NGVL RTV+D VTG+L D+R+R+LG++P KLF V +    A    
Sbjct: 675  STLFLNIGLEVNKFTNGVLLRTVLDSVTGELQDTRTRYLGMKPVKLFKVKMHDNIAVMNS 734

Query: 707  ----MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
                ++ +SSR WL Y ++ R+ LTPLSY  LEYA++F+SDQC EGVV++AGN+LR+  I
Sbjct: 735  VQLNIIAMSSRAWLLYKYQTRYHLTPLSYIPLEYASNFASDQCPEGVVAIAGNSLRILAI 794

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAE----EREAAKKECFEAA 818
            E LG  FN ++  L +TPRRFV  P+   ++ +ETD  +LT +     RE   KE  E A
Sbjct: 795  ENLGTIFNYSSFQLSHTPRRFVFHPETGNIITVETDHNSLTTQTKMKRREILAKEMIELA 854

Query: 819  GMGENG-NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
            G  E      M Q    +D      L + Q+G P+A +  W S I VL     +    +E
Sbjct: 855  GEDEKEIAAEMSQAFLEED------LPEVQFGTPRAGNGTWASVINVLSASDGHNLFKVE 908

Query: 878  LQDNEAAFS-------ICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEE 930
            L+ NEAAF        +  V F       LL VG A      P R + +G+I+ Y     
Sbjct: 909  LEQNEAAFWYETKNALMALVQFACHPEAPLLLVGGAVNYNLRP-RKVESGFIYTYTISAL 967

Query: 931  GKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI 990
            G  LE++H+T V+    AL  F+GRLLA  G +LR+YDLGKK+LLRKCENK  PN I  I
Sbjct: 968  GDRLEMMHRTTVDEAVTALASFRGRLLASAGKMLRIYDLGKKKLLRKCENKHMPNLITHI 1027

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             T   RI+VGD+QES  F +Y+  ENQL +FADD+  R+ +A   +D+DT+A        
Sbjct: 1028 LTMGHRIFVGDVQESVFFYRYKPIENQLVVFADDTHQRFCSAMCILDYDTVA-------- 1079

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG 1110
              +RLP D +D+++EDPTG +  W++G LNGA  K E +  F+VG+ VT LQKA L+PG 
Sbjct: 1080 --LRLPSDCTDDVQEDPTGIRALWDKGILNGASQKCEMVATFYVGECVTCLQKAMLIPGS 1137

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDV 1170
             ES++Y T+ G +GA++ FSS++D +FF HLEMH+R E+PPLCGRDH+AYRS Y PVK V
Sbjct: 1138 SESLVYSTMSGMIGALVPFSSKEDYEFFQHLEMHLRTEYPPLCGRDHLAYRSFYAPVKGV 1197

Query: 1171 IDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            IDGDLCEQ+  L    Q++I++ELDR P EI+KKLE+IRN+
Sbjct: 1198 IDGDLCEQYCLLEYGKQKEISNELDRVPSEIMKKLEDIRNR 1238


>gi|119473054|ref|XP_001258481.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
            181]
 gi|119406633|gb|EAW16584.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
            181]
          Length = 1209

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1228 (50%), Positives = 830/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G+I  + S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DYSEADQD TG+A  E++K L +YELDLGLNHV RKW++PVD  A+ML  VPG
Sbjct: 187  IFAALEVDYSEADQDPTGRAYEESEKLLVYYELDLGLNHVVRKWADPVDRTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ + Y++      R  IPRR  A    ER   IV+   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDSITYRHSNQDAFRVPIPRRIGATENPERKRSIVAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E D+      V  LKIKYFDT+P+ +++ +LKSG+L+ ASE G
Sbjct: 307  LLQTEDGDLFKVTIDMVEDDSGQLTGEVKRLKIKYFDTVPIASNLLILKSGFLYVASEAG 366

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEG--FQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D +    SS     +    ++PVFF+PRG +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEETEFSSENFPADPSVPYEPVFFRPRGAENLNLVETLNSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQI+T+ G G RSS R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KIVNLNEDDAPQIYTVSGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL T P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +  KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKQVKLFRVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  I    F+LTPL Y  LE+  +FSS+QCVEG+V +    LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL  TPRR +  P++ L  +IE+D   L+   R    ++         NG 
Sbjct: 781  DNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARLIEDS-----KARNGE 835

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDNEAA 884
             N+              L  E +GYP+A +  W SCI+++DP  A      +EL++NEAA
Sbjct: 836  TNV--------------LPPEDFGYPRA-TGHWASCIQIVDPLDAKAVISTIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGTAK +   P  +   G+IHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSMAAVPFSSQDDETFLVVGTAKDMIVNPPSS-AGGFIHIYRFQEDGKELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRLLAGIG  LR+YDLG K+LLRKC+  +   TIV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLLAGIGSTLRVYDLGMKQLLRKCQAPVVSKTIVGLQTQGSRIIVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN L  F DDSV RW T+   +D++T+AG DKFGN++ VR P+ VS+E +
Sbjct: 1000 SVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKVSEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L+G PN+++ ++  +  D+ TSL K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLHGTPNRLDLMIHTYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF +LEM +  + PPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFVSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1180 DTKMMIAAELDRSVREIERKISDMRTRV 1207


>gi|115390120|ref|XP_001212565.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
 gi|114194961|gb|EAU36661.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
          Length = 1217

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1221 (50%), Positives = 830/1221 (67%), Gaps = 43/1221 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G++  + S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPIYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++C +D G++NP
Sbjct: 127  LAVDPKGRACIIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMCALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE+DQD TG+A  E +K L +YELDLGLNHV RKW++PVD  A ML  VPG
Sbjct: 187  VFAALEVDYSESDQDPTGRAFEETEKLLVYYELDLGLNHVVRKWADPVDRTATMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ V Y++      R  IPRR  A    ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDNVTYRHLNQDAFRVPIPRRRGATENPERKRCITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVT---LEHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FK+T   +E DN      V  LKIKYFDT+P+ +++ +LKSG+L+ ASE G
Sbjct: 307  LLQTEDGDLFKLTIDMMEDDNGQLTGEVKRLKIKYFDTVPIASNLLILKSGFLYVASEAG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D ++E SS     +     +PV+FQPRG +NL  ++ + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEEIEFSSEDFSADPSVPCEPVYFQPRGAENLNLVDTINSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ANL EE+APQI+T+ G G RS+ R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KVANLSEEDAPQIYTISGAGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTREDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+Q+HP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLVQIHPRGIRHIMVD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V  L
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTSL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ++++ P +L  + +  S  
Sbjct: 607  SLGEVPEGRIRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  I    F+LTPL Y  LE+  +FSS+QC+EG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL YTPRRFV  P++ L  +IE+D   L+   R          A + E+  
Sbjct: 781  DNNMLQQSIPLSYTPRRFVKHPEQPLFYVIESDNNVLSPSTR----------ARLLEDSK 830

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
                   NGD       L  E++GYP+A +  W SCI+V+DP  A      +EL+DNEAA
Sbjct: 831  S-----RNGDTT----VLPPEEFGYPRA-TGHWASCIQVVDPLDAKAVVHTVELEDNEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGT K +   P  +   G+IHIYRF E+G+ LE +HKT+VE 
Sbjct: 881  VSVAAVPFTSQDDETFLVVGTVKDMTVNPPSS-AGGFIHIYRFQEDGRELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRL  G+G +LR+YDLG K+LLRKC+  + P TIV + T   RI V D++E
Sbjct: 940  PPLALLAFQGRLAVGLGSLLRIYDLGMKQLLRKCQAHVVPKTIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN L  F DDS+ RW T+   +D++T+AG DKFGN++ VR P+ VS++ +
Sbjct: 1000 SVTYVVYKYQENVLIPFVDDSISRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKVSEQAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L+G PN++E ++  +  D+ TSL K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLHGTPNRLELMIHVYTQDIPTSLHKTQLVAGGRDILVWTGFHGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF +LEM +  +HPPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFVSREDVDFFQNLEMQLASQHPPLAGRDHLIYRSYYAPVKGVIDGDLCETYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKL 1205
            D +  IA +LDR+  EI +K+
Sbjct: 1180 DTKMMIAADLDRSVREIERKI 1200


>gi|83767504|dbj|BAE57643.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1270

 Score = 1224 bits (3168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1221 (50%), Positives = 829/1221 (67%), Gaps = 43/1221 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT +  AI G F+GTK  +IV A G  L + RP+   G++  L S ++FG
Sbjct: 7    MFMYSLTIQPPTAVTQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMSALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DYSE+DQD TGQA  EA+K L +YELDLGLNHV RKW++PVD  ++ML  VPG
Sbjct: 187  IFAALEVDYSESDQDPTGQAYEEAEKLLVYYELDLGLNHVVRKWADPVDRTSSMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ V Y++      R  IPRR+      ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGPTENPERKRFITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FK+ +   E DN      V  LKIKYFDT+PV +S+ +LKSG+L+ ASE G
Sbjct: 307  LLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILKSGFLYVASEAG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D ++E SS     +     +P++F+PR  +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVETINSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ANL EE+APQI+T+ G G RS+ R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+Q+HP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIMAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ++++ P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ A+
Sbjct: 667  GG------TALYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  I    F+LTPL Y  LE+  +FSS+QC+EG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++ L YTPRRF+  P++ L  +IE+D   L+   R    ++     G      
Sbjct: 781  DNNMLQQSISLAYTPRRFLKHPEQPLFYVIESDNNVLSPSTRAKLLEDSKARTG------ 834

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
                      DE    P   E++GYP+  S  W SCI+V+DP  A      +EL++NEAA
Sbjct: 835  ----------DETVLPP---EEFGYPRG-SGHWASCIQVVDPVHAKAVVSTIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGTAK +   P  +   GYIHIYRF E+G+ LE +HKT+VE 
Sbjct: 881  VSVAAVPFTSQDDETFLVVGTAKDMNVNPPSS-AGGYIHIYRFQEDGRELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRL+AGIGP+LR+YDLG K+LLRKC  ++ P TIV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQVVPKTIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN L  F DDSV RW T+   +D++T AG DKFGNI+ +R P+ +S++ +
Sbjct: 1000 SVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNIWMLRCPKKISEQAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L+G PN++E ++  +  D+ T+L K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLHKTQLVAGGRDILVWSGFHGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF +LEM +  ++PPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFVSREDVDFFQNLEMQLAAQNPPLAGRDHLIYRSYYAPVKGVIDGDLCETYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKL 1205
            D +  IA ELDR+  EI +K+
Sbjct: 1180 DTKMMIAAELDRSVREIERKI 1200


>gi|212531303|ref|XP_002145808.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
            18224]
 gi|210071172|gb|EEA25261.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
            18224]
          Length = 1209

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1229 (50%), Positives = 835/1229 (67%), Gaps = 45/1229 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLTLQ PT +  AI G F+GTK  +IV A G  L + RP+ + G++  + + ++FG
Sbjct: 7    MFMYSLTLQNPTAVTQAILGQFAGTKEQQIVTASGSKLTIHRPDAAQGKVTPIYTQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK+ T+V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTVVFALTALDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAAIE+DYSE+DQD TG+A  E +K L +YELDLGLNHV R+WS+ +   +N+L  VPG
Sbjct: 187  IFAAIEVDYSESDQDPTGRAYEEVEKQLVYYELDLGLNHVVRRWSDVIHRTSNILFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFF 296
            G DGPSGVLVCAE+ V Y++      R  IPRR    + P ER   IV+   H+ +  FF
Sbjct: 247  GADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRNGPTENP-ERKRSIVAGVMHKMRGAFF 305

Query: 297  FLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            FLLQTE GD+FK+T+   E +N      V  LKIKYFDT+P+ A++ +LKSG+LF ASE 
Sbjct: 306  FLLQTEDGDLFKLTIDMVEDENGQLTGEVKRLKIKYFDTVPIAANLLILKSGFLFVASET 365

Query: 350  GNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
            GNH  YQF+ +G  D + E SS  +  +  +   PV+F  RG +NL  +E + SL PIMD
Sbjct: 366  GNHHFYQFEKLGDDDEETEFSSDDVSADPADPINPVYFNLRGAENLNLVESINSLNPIMD 425

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
             +I +   E+APQI+T+CG G RS+ R L+ GL VSE+  S+LP VPSAVWT K   NDE
Sbjct: 426  CKITDAIGEDAPQIYTICGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDE 485

Query: 468  FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
            FDAYIV+SF N TLVLSIGETVEEV+D+GFL T P+LAV  +G+DSL+QVHP GIRHI  
Sbjct: 486  FDAYIVLSFTNGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPKGIRHILA 545

Query: 528  DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVAC 586
            D R+NEW  P  RTIV   +N  QV +ALS GE++YFE+D  G L E  EK +MSG V  
Sbjct: 546  DHRVNEWPAPQHRTIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTS 605

Query: 587  LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
            L +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S 
Sbjct: 606  LSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSMIDST 665

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
             G       ++L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ A
Sbjct: 666  SG------GSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFGVSVKGQPA 719

Query: 707  MLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
            +L LSSRPWLGY  +    F+LT L Y  LE+  +FSS+QC+EG+V + G  LR+F+IE+
Sbjct: 720  VLALSSRPWLGYSDVQTKSFMLTSLDYVGLEWGWNFSSEQCLEGMVGIQGQNLRIFSIEK 779

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
            L     + ++PL YTPR FV  P++ L  +IE++   L      A +    E +      
Sbjct: 780  LDNNVLQESIPLAYTPRHFVKHPEQPLFYVIESENNVLAP----ATQTRLLEES------ 829

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDNEA 883
                 +++NG  E    P   E +GYP+A +  W SCI V+DP +A +    LEL++NE+
Sbjct: 830  -----KLQNG--EAVIPPA--ETFGYPRA-TGHWASCIEVVDPVNAKSVLSRLELEENES 879

Query: 884  AFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE 943
            A SI  V+F  +++ T L VGT K +  +P R+  AG+IHIYRF E+G+ LE +HKT++E
Sbjct: 880  AVSIAAVSFASQDNETFLVVGTGKDVVTYP-RSFSAGFIHIYRFQEDGRELEFIHKTKIE 938

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
              PLAL  FQGRL+AGIG  LR+YDLG K++LRKC+ +  PN IV + T   RI V D+Q
Sbjct: 939  EPPLALLAFQGRLVAGIGKNLRIYDLGMKQMLRKCQVEAVPNLIVGLQTQGSRIIVSDVQ 998

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            ES  +  Y+  ENQL  F DD + RW TA   +D++T AG DKFGN++ VR PQ  SD+ 
Sbjct: 999  ESVTYVVYKYQENQLIPFVDDVIARWTTATTMVDYETTAGGDKFGNLWLVRCPQKASDDS 1058

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL 1123
            +ED +G  +  E+  L G  N++  ++ ++  D+ TSL K +LV GG + +++  + G++
Sbjct: 1059 DEDGSGAHLIHERSYLQGTANRLNLMIHYYTQDIPTSLHKTNLVVGGRDILVWTGLQGTI 1118

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
            G M+ F SR+DVDFF +LE  +  ++PPL GRDH+ YRS Y P K VIDGDLCE +  L 
Sbjct: 1119 GIMVPFISREDVDFFQNLETQLASQNPPLAGRDHLIYRSYYVPSKGVIDGDLCESYFLLP 1178

Query: 1184 LDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1179 NDKKLMIAGELDRSVREIERKISDMRTRV 1207


>gi|238487250|ref|XP_002374863.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
 gi|220699742|gb|EED56081.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
          Length = 1210

 Score = 1223 bits (3165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1221 (50%), Positives = 829/1221 (67%), Gaps = 43/1221 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT +  AI G F+GTK  +IV A G  L + RP+   G++  L S ++FG
Sbjct: 7    MFMYSLTIQPPTAVTQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMSALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DYSE+DQD TGQA  EA+K L +YELDLGLNHV RKW++PVD  ++ML  VPG
Sbjct: 187  IFAALEVDYSESDQDPTGQAYEEAEKLLVYYELDLGLNHVVRKWADPVDRTSSMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ V Y++      R  IPRR+      ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGPTENPERKRFITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FK+ +   E DN      V  LKIKYFDT+PV +S+ +LKSG+L+ ASE G
Sbjct: 307  LLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILKSGFLYVASEAG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D ++E SS     +     +P++F+PR  +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVETINSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ANL EE+APQI+T+ G G RS+ R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+Q+HP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIMAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ++++ P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  I    F+LTPL Y  LE+  +FSS+QC+EG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++ L YTPRRF+  P++ L  +IE+D   L+   R    ++     G      
Sbjct: 781  DNNMLQQSISLAYTPRRFLKHPEQPLFYVIESDNNVLSPSTRAKLLEDSKARTG------ 834

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
                      DE    P   E++GYP+  S  W SCI+V+DP  A      +EL++NEAA
Sbjct: 835  ----------DETVLPP---EEFGYPRG-SGHWASCIQVVDPVHAKAVVSTIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGTAK +   P  +   GYIHIYRF E+G+ LE +HKT+VE 
Sbjct: 881  VSVAAVPFTSQDDETFLVVGTAKDMNVNPPSS-AGGYIHIYRFQEDGRELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRL+AGIGP+LR+YDLG K+LLRKC  ++ P TIV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQVVPKTIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN L  F DDSV RW T+   +D++T AG DKFGNI+ +R P+ +S++ +
Sbjct: 1000 SVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNIWMLRCPKKISEQAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L+G PN++E ++  +  D+ T+L K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLHKTQLVAGGRDILVWSGFHGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF +LEM +  ++PPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFVSREDVDFFQNLEMQLAAQNPPLAGRDHLIYRSYYAPVKGVIDGDLCETYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKL 1205
            D +  IA ELDR+  EI +K+
Sbjct: 1180 DTKMMIAAELDRSVREIERKI 1200


>gi|226293297|gb|EEH48717.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb18]
          Length = 1208

 Score = 1222 bits (3163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1221 (50%), Positives = 826/1221 (67%), Gaps = 43/1221 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            +++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G+I TL S ++FG
Sbjct: 7    LFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKIRTLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL G  KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR++PGQY
Sbjct: 67   IIRTLAAFRLAGGSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGIRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+T A LTISSPLEAHK  T+V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+EADQD TGQA  E +K L +YELDLGLNHV RKWS+PVD  A ML  VPG
Sbjct: 187  IFAALEVEYTEADQDPTGQAYEELEKQLVYYELDLGLNHVVRKWSDPVDRSATMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSG LVCAE+ + Y++      R  IPRR+      ER   IV+   H+ +  FFF
Sbjct: 247  GADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRCIVAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEHVS----ELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E DN  ++     LK+KYFDT+P+ +S+C+LKSG+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVASETG 366

Query: 351  NHALYQFQAIGADPD-VEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D D +E +S +      E   PV+F PR  +N+  +E V SL P+MD 
Sbjct: 367  NHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVENVNSLNPLMDC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQI+T+CG G RSS R L+ GL V+E+  S+LP VPSAVWT K    DEF
Sbjct: 427  KITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKLTREDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VP+GR RS FLAVG  D+T+RILSLDPD  +   SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPKGRARSSFLAVGCDDSTVRILSLDPDSTLGNKSVQALTSAPSALSIMAMADSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+P KLF V V  + A+
Sbjct: 667  GG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQKAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  +    F+LTPL Y  LE+  +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  + L YTPR+F+  P++ L  +IE D   L+   R     +         NG+
Sbjct: 781  ENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRTKLLNDSDAV-----NGD 835

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEAA 884
              +              L  E +GYP+  +  W SCI+++DP  S +    +EL++NEAA
Sbjct: 836  ATV--------------LPPEDFGYPRG-TGHWASCIQIVDPVNSKSVVSQIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V+F  ++  T L VGT K +   P R+  AG+IHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSVAAVSFSSQDDETFLVVGTGKDMVVNP-RSCSAGFIHIYRFQEDGKELEFIHKTKVEQ 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P+AL  FQGRLLAGIG  +R+YDLG +++LRKC+  + P+ +V + T   RI V D+QE
Sbjct: 940  PPVALLGFQGRLLAGIGTDVRIYDLGMRQMLRKCQASVVPHLVVGLQTQGSRIIVSDVQE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN+L  F DD + RW T    +D++T+AG DKFGN++ +R P   S+E +
Sbjct: 1000 SVTYVVYKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+  L GAPN++  +  F+  D+ TS+QKA LV GG + +++  + G++G
Sbjct: 1060 EDGSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVWTGLQGTVG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR++VDFF  LEM +  ++PPL GRDH+ YRS Y P K  IDGDLCE +  L  
Sbjct: 1120 MLIPFISREEVDFFQSLEMQLAAQNPPLAGRDHLIYRSYYAPAKGTIDGDLCETYLLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKL 1205
            D +++IA ELDR+  EI +K+
Sbjct: 1180 DKKQQIAGELDRSVREIERKI 1200


>gi|320164105|gb|EFW41004.1| splicing factor 3B subunit 3 [Capsaspora owczarzaki ATCC 30864]
          Length = 1218

 Score = 1222 bits (3163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1236 (49%), Positives = 845/1236 (68%), Gaps = 48/1236 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-PENSGRIETLVSTEIFG 59
            M+LYSLTLQ+ + I  A++GNFSGTK  EI V RG VLELL   + S +++T+ S  IFG
Sbjct: 3    MHLYSLTLQRASAITCAVHGNFSGTKQQEIAVGRGSVLELLALDQASAKVKTIASINIFG 62

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R L  FRLTG+ KDY+VVGSDSGR+ ILEYNP+K  F+++H ET+GKSG RRIVPGQY
Sbjct: 63   VVRCLTAFRLTGASKDYLVVGSDSGRVAILEYNPTKYEFERVHLETYGKSGSRRIVPGQY 122

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA D KGRA+MI A EKQKLVYV+NRD+ ARLTI+SPL+AHK+H +V++  G+D GF+ P
Sbjct: 123  LAADAKGRAIMISAVEKQKLVYVMNRDSTARLTITSPLDAHKAHAVVFATVGLDVGFEAP 182

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FA +ELDY EAD D +G+A    Q++L FYELDLGLNHV RK SEP+   ANML+ VPG
Sbjct: 183  TFACVELDYEEADNDPSGEAVEATQQHLVFYELDLGLNHVVRKSSEPLPGWANMLIQVPG 242

Query: 240  GGDGPSGVLVCAENFVIYKNQGHP--DVRAVIP-RRADL--PAERGV---LIVSAATHRQ 291
              DGP GV+VC E F++YK+   P  DVR   P RR D+  P++RG    ++V+ A+H+ 
Sbjct: 243  ADDGPGGVVVCCEGFLVYKSPEDPAIDVRCPFPGRRHDISDPSKRGAGRGIVVAHASHKT 302

Query: 292  KTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            KT FFF++Q + GD+FKVTL+  +++V  +++K FDT+PV  S+ +L+SG+LF A+E G+
Sbjct: 303  KTKFFFVVQLDNGDMFKVTLDVADDNVVSIRMKLFDTLPVATSLHILRSGHLFVAAELGD 362

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEG-------------FQPVFFQPRGLKNLVRIEQ 398
            H LYQ   + A+ D E   +T      G                  + PR L NLV ++ 
Sbjct: 363  HHLYQITQL-AENDDEPEFTTRGLVMNGRVVPSSVAHGGVELSAFVYTPRPLLNLVLLDV 421

Query: 399  VESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVW 458
            +ES  P M  R+ +L  E+APQ + LCGRGP S+LRILR GL VS++A ++L   P A+W
Sbjct: 422  MESTAPTMQCRVEDLLGEDAPQFYLLCGRGPNSTLRILRHGLEVSQLAATELTASPVAIW 481

Query: 459  TVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            +VK++++D  D Y +VS+ +AT+VLS+G+ V  VSDSG L T  ++AVS IG+D L+QV+
Sbjct: 482  SVKRSIHDIHDTYFIVSWASATVVLSVGDQVAPVSDSGLLLTVGTIAVSRIGEDDLLQVY 541

Query: 519  PSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEK 577
              GIRHIR D R+NEWRTPG+R IV+   N  QVVIAL+GGEL+YFE+D+TGQL E  E+
Sbjct: 542  TDGIRHIRADSRVNEWRTPGRRQIVRAAINDRQVVIALAGGELVYFELDITGQLNEFAER 601

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
               S +V  L IA VP  R+R+RFLAV + DNT+RI+SL+  D +Q L VQ+V+    SL
Sbjct: 602  FTSSAEVCALAIAPVPADRRRARFLAVAAEDNTVRIVSLELSDTLQSLGVQTVADRASSL 661

Query: 638  LFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
             F +           +  A L L  GLQNG+L RT V+  +G L+D+R+R+LG RP  LF
Sbjct: 662  CFADPSLD-------NSSADLVLGVGLQNGILLRTSVEPSSGNLTDTRTRYLGTRPVMLF 714

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
               V G A  L LSSRPW+ Y+ +G   LTPLSY+ L+ AA+FS+  C  G+V++AGN L
Sbjct: 715  PSKVHGAAGFLALSSRPWIFYVQQGTPTLTPLSYDALDCAATFSAANCPNGLVAIAGNTL 774

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
            RV  + RLG  FN+T++PL+YTPRRF++  + +L+VI E+D          AA ++  E 
Sbjct: 775  RVLNLPRLGSVFNQTSMPLKYTPRRFIVDSEHRLLVIAESDHNTF------AAGRKAVEQ 828

Query: 818  AGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
            A +    N     +         + L D  +G P A + +W SC+R++D +   T  L+E
Sbjct: 829  ARVAAETNTTQAAIA--------ESLPDAVFGAPAAGAARWGSCLRIVDAQLRETLELIE 880

Query: 878  LQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELL 937
            L ++E  FS+ + +FH  E  T   VGT K L     R    G ++ YRF  + + L+ +
Sbjct: 881  LDEDEGVFSMTSCSFHGHEGQTFFIVGTTKALNLQ-TRAHQGGCLYTYRFNPQTRRLDFV 939

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRI 997
            H+T+VE +P A+  FQGRLL G+G +LR+YDLGK++LLRKCEN+  PN + SI T   RI
Sbjct: 940  HRTEVEDVPGAMYPFQGRLLVGVGSLLRVYDLGKRKLLRKCENRSIPNFVSSITTSGGRI 999

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             V D+QESFHF +YR  +N L +FADDS PRW+T++  +D+DT+A  DKFGN++ +RLPQ
Sbjct: 1000 VVTDVQESFHFLRYRPSDNMLAVFADDSNPRWVTSSTMVDYDTVAAGDKFGNVFVLRLPQ 1059

Query: 1058 DVSDEIEEDPTGGK-IKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIY 1116
            D+ D++E+DPTGG+ +   +  LNGA  K + I+ FHVGD VT++QK +L+P G E ++Y
Sbjct: 1060 DLQDDLEDDPTGGRLLGSSKNTLNGAAQKADTIINFHVGDTVTTMQKTALIPSGSECLVY 1119

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLC 1176
             T +G++G ++ F+++ D+DFF HLEMHMRQE+PP+CGRDH+A+RS YFP K+VIDGDLC
Sbjct: 1120 TTTLGAIGVLIPFTTQSDIDFFKHLEMHMRQENPPICGRDHLAFRSHYFPSKNVIDGDLC 1179

Query: 1177 EQFPTLSLDLQRKIADEL-DRTPGEILKKLEEIRNK 1211
            EQF +L    +R IA +L DRTP E+ KKLE++R +
Sbjct: 1180 EQFNSLDPHKKRLIAGDLADRTPSEVSKKLEDLRTR 1215


>gi|70992737|ref|XP_751217.1| nuclear mRNA splicing factor [Aspergillus fumigatus Af293]
 gi|74670386|sp|Q4WLI5.1|RSE1_ASPFU RecName: Full=Pre-mRNA-splicing factor rse1
 gi|66848850|gb|EAL89179.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus Af293]
          Length = 1225

 Score = 1222 bits (3163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1221 (51%), Positives = 826/1221 (67%), Gaps = 43/1221 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G+I  + S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRTLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DYSEADQD TG+A  E++K L +YELDLGLNHV RKW++PVD  A+ML  VPG
Sbjct: 187  IFAALEVDYSEADQDPTGRAYEESEKLLVYYELDLGLNHVVRKWADPVDRTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ + Y++      R  IPRR  A    ER   IV+   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRIGATENPERKRSIVAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E DN      V  LKIKYFDT+P+ +S+ +LKSG+L+ ASE G
Sbjct: 307  LLQTEDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPIASSLLILKSGFLYVASEAG 366

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEGF--QPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D +    +S     +     +PVFFQPRG +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEETEFNSENFPADLSVPCEPVFFQPRGAENLNLVETLNSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQI+T+ G G RSS R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL T P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  I    F+LTPL Y  LE+  +FSS+QCVEG+V +    LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL  TPRR +  P++ L  +IE+D   L+   R    ++         NG 
Sbjct: 781  DNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARLIEDS-----KARNGE 835

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDNEAA 884
             N+              L  E +GYP+A +  W SCI+++DP  A      +EL++NEAA
Sbjct: 836  TNV--------------LPPEDFGYPRA-TGHWASCIQIVDPLDAKAVISTIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGTAK +   P  +   G+IHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSMAAVPFSSQDDETFLVVGTAKDMIVNPPSS-AGGFIHIYRFQEDGKELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRLLAGIG  LR+YDLG K+LLRKC+ ++   TIV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLLAGIGSTLRIYDLGMKQLLRKCQAQVVSKTIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  +N L  F DDSV RW T+   +D++T+AG DKFGN++ VR P+  S+E +
Sbjct: 1000 SVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L+GAPN+++ ++  +  D+ TSL K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLHGAPNRLDLMIHTYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF +LEM +  + PPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFVSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKL 1205
            D +  IA ELDR+  EI +K+
Sbjct: 1180 DTKMMIAAELDRSVREIERKI 1200


>gi|328869269|gb|EGG17647.1| CPSF domain-containing protein [Dictyostelium fasciculatum]
          Length = 1194

 Score = 1222 bits (3163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1235 (49%), Positives = 839/1235 (67%), Gaps = 68/1235 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MYLY+LTLQ+ T I  +++GNFSG+K  EI+V+ G  LELLRP++SGR++ ++ +E FG 
Sbjct: 1    MYLYNLTLQKSTAIFQSVSGNFSGSKAVEIIVSNGHALELLRPDDSGRLDHVLYSEAFGV 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRS+A FRLTG  KDY++VGSDSGR+VILEYNPSKNVF+K+HQETFG+SGCRRIVPGQY+
Sbjct: 61   IRSIAPFRLTGGSKDYLIVGSDSGRVVILEYNPSKNVFEKVHQETFGRSGCRRIVPGQYI 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            + DPKGRA MIGA EKQKLVY+LNRD+ A+L+ISSPLEAHK+HTIV+S+CG+D GF+NPI
Sbjct: 121  STDPKGRAFMIGAIEKQKLVYILNRDSQAKLSISSPLEAHKAHTIVFSMCGVDVGFENPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FA I +DYSE + +      +   K LTFYELDLGLN+V RKWSE VD  AN++V+VPGG
Sbjct: 181  FATISVDYSE-ETNIEDVEETHNTKVLTFYELDLGLNNVVRKWSEEVDRSANLVVSVPGG 239

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGP GVLVCA+  V Y+N GH D+   IPRR  +  E+ ++IVS A+H+Q+ +FFFL+Q
Sbjct: 240  SDGPGGVLVCAQGRVYYRNIGHADISVSIPRRNGMTEEKSLMIVSHASHKQRDMFFFLVQ 299

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +EYGD++K+TL++  E VS ++I YFDT P    + +LK+G+LF ASEFG+H LY F+++
Sbjct: 300  SEYGDLYKITLDYSGEMVSGMQIAYFDTFPTANCITMLKNGFLFVASEFGDHGLYLFKSL 359

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G D    ASS+   E    F+PV F+PR   NLV    + SL PI+D ++A+L +E  PQ
Sbjct: 360  GLDDAPTASSAGNTEM-VFFEPV-FEPR---NLVLTATISSLSPIVDFKVADLAQEGTPQ 414

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN--------------VND 466
            ++ L G   R++LR+LR GL +++M  SQLPG P+ +WT+ ++              V  
Sbjct: 415  MYALSGVSERANLRVLRHGLPITQMVDSQLPGTPAGIWTIPQSLTTMRNPQYQGIGTVES 474

Query: 467  EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGD--DSLMQVHPSGIRH 524
              D YIVVSF  +TLVL +GETVEEV DSG L TT ++ +  +G   DS++Q+   GIRH
Sbjct: 475  PADRYIVVSFVGSTLVLGVGETVEEVQDSGILSTTTTILIRSMGANLDSIVQIFAQGIRH 534

Query: 525  IREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV 584
            I  + R++EWR PG++TI    +N+ QV+I + G E+IYFE+D  G L EV K +M  D+
Sbjct: 535  INAERRVSEWRAPGRKTISIAAANQQQVIICIGGSEIIYFELDPAGNLTEVFKKDMRKDI 594

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCM-QILSVQSVSSPPESLLFLEVQ 643
             C++ A +P GR  SRF+A+  YD  +RILSL+ D+ + Q+  V +     E L   E+ 
Sbjct: 595  NCIEFAPIPRGRTMSRFVAISDYDGPVRILSLERDNMLNQVSMVDTDRQQVEQLCVAELM 654

Query: 644  ASVGGED----GADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
                G D          +LFL+ GL+NGVL R V+D +TG++SD R+R LG RP K F V
Sbjct: 655  VHEPGVDQQIVNTQRQGTLFLHIGLKNGVLKRAVLDGLTGEISDMRTRILGRRPIKFFRV 714

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
             + G  A+L LS+R W+ Y + GR+ +TPLS E L++AAS SSDQC EG+V+ + N L++
Sbjct: 715  KIKGSPAVLALSTRVWMCYSNLGRYEITPLSVEPLDHAASLSSDQCPEGIVATSENNLKI 774

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAG 819
            F+IE+LG+ FN+  +PL  TP+RFV+ P+   +V IET+    T                
Sbjct: 775  FSIEKLGDLFNQVQIPLSCTPKRFVVHPQTNYIVSIETEHNFST---------------- 818

Query: 820  MGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
                               +++P   +    P+A   KW S IR+LDP S  T  L+ L 
Sbjct: 819  -------------------QFEPELAQDLEMPRAGKGKWKSVIRILDPVSNQTLDLVSLT 859

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAAFSI TV F + E   +LAVG AK +Q  P R   +  IH+Y+FVE G+ L L+H 
Sbjct: 860  NNEAAFSIGTVMFQEGE--VMLAVGCAKDVQLQP-RGFSSASIHLYQFVENGQKLALVHT 916

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+ + IP A+  FQG+L+AG+G VLRLY+LGKK+LLRKCEN+  PN I SI +  DRI V
Sbjct: 917  TETDLIPHAVGSFQGKLIAGVGNVLRLYELGKKKLLRKCENRKVPNQITSIQSQGDRIVV 976

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP--Q 1057
             D+QES HF  YRR EN L +FADD+ PR++T+   +DFDT+A ADKFG I  VR+P   
Sbjct: 977  SDVQESVHFFTYRRSENVLVLFADDTAPRFVTSCVMLDFDTVAIADKFGTIAVVRMPPSS 1036

Query: 1058 DVSDEIEEDPTGGKIKWEQG-KLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIY 1116
            D   +IE +   G +  +    LNGA NK+E +  F+VG+   +L + SL+ GG E +IY
Sbjct: 1037 DTDIDIENELDIGTLTTKSKLALNGAANKLELVASFYVGETCCNLTRTSLMVGGSEVIIY 1096

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLC 1176
             T+ G++GA++ FSSR++VDFF+ LEM MRQE   LCGRDH++YRS YFPVK+VIDGDLC
Sbjct: 1097 TTLGGAIGALIPFSSREEVDFFAQLEMQMRQEKESLCGRDHLSYRSYYFPVKNVIDGDLC 1156

Query: 1177 EQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            EQ+ TL    QR +A+EL R P E+LKKLE+IR++
Sbjct: 1157 EQYSTLDATKQRSVAEELIRNPSEVLKKLEDIRSQ 1191


>gi|392869416|gb|EJB11761.1| pre-mRNA-splicing factor rse1 [Coccidioides immitis RS]
          Length = 1209

 Score = 1222 bits (3162), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1228 (50%), Positives = 825/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G FSG K  +IV+A G  L +  P+ + G+I TL S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAIIGQFSGVKEQQIVIASGSKLSIHEPDSHQGKIRTLYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRIAIVEYVPSQNRFNRIHLETFGKSGIRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTLVFALTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DY+E+DQD TG A  EA+K L +YELDLGLNHV R+W++PVD  A ML  VPG
Sbjct: 187  IFAALEVDYTESDQDPTGAAYQEAEKLLVYYELDLGLNHVVRRWADPVDRSAAMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVC E  + Y++      R  IPRR+      ER   I +   H+ +  FF 
Sbjct: 247  GADGPSGVLVCGEGNITYRHSNQDAFRVPIPRRSGPTENPERKRYITAGVVHKMRRAFFC 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E +N      V  LK+KYFDT+PV +S+C+LK+G+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCILKNGFLFVASETG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D + E SS     +  E   PV+F+PR  +NL  +E + SL P+M  
Sbjct: 367  NHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLVESINSLNPLMSC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQ +TL G G RS+ R L+ GL VSE+  S+LP VPSAVWT K   ND++
Sbjct: 427  KITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQY 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VP GR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPPGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMVDSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+P KLFSV V  + A+
Sbjct: 667  GG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQRAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  +    F+LTPL Y  LE++ +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  +PL YTPR FV  P++ L  +IE D   L+   +    ++   A       N
Sbjct: 781  DNNLLQETIPLAYTPRHFVRHPEQPLFYVIEADNNILSPSTKAKLLQDSKAA-------N 833

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEAA 884
            G + +            L  E +GYP+  +  W SCI+V+DP  S      +EL++NEAA
Sbjct: 834  GEVAE------------LPPEDFGYPRG-TGHWASCIQVVDPINSKAVISRIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGT K +  +P  +   G+IHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSVAAVPFSSQDDETFLVVGTGKDMVVYPPSS-SCGFIHIYRFQEDGKELEFIHKTKVES 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P AL  FQGRLLAGIG  LR+YDLG K+LLRKC+ ++ P  IV + T   RI V D+QE
Sbjct: 940  PPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRLIVGLQTQGSRIIVSDVQE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN+L  FADD + RW T    +D++T+AG DKFGN++ +R PQ  S+E +
Sbjct: 1000 SVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFGNLWLLRCPQKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+  L GAPN++  +V F+  D+ TS+QK  LV GG + +++  + G++G
Sbjct: 1060 EDGSGAHLIHERQYLQGAPNRLSLMVHFYPQDIPTSIQKTQLVAGGRDILVWTGLQGTVG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF  LEM +  + PPL GRDH+ YRS Y P K  IDGDLCE + TL  
Sbjct: 1120 MLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDHLIYRSYYAPAKGTIDGDLCETYFTLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +  IA ELDR+  EI +K+ ++R K+
Sbjct: 1180 DKKLMIAGELDRSVREIERKISDMRTKV 1207


>gi|393245024|gb|EJD52535.1| hypothetical protein AURDEDRAFT_111199 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1214

 Score = 1222 bits (3162), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1235 (49%), Positives = 839/1235 (67%), Gaps = 53/1235 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ P+ +  AI GNFSG +  EI+V+RG  LELL+P+  SG++ ++++ ++FG
Sbjct: 1    MHLYNLTLQAPSAVPQAIVGNFSGARHQEIIVSRGTRLELLKPDPTSGKLTSVLTHDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            A+RSL  FRLTG  KDY +VGSDSGRIVIL+Y+P  N F +++ ET+GKSG RRIV GQY
Sbjct: 61   AVRSLVAFRLTGGTKDYAIVGSDSGRIVILDYDPKANEFKRLYTETYGKSGARRIVAGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMI A EK KLVY+LNRD A  LTISSPLEAH++ +I++ I G+D GF+NP
Sbjct: 121  LAVDPKGRAVMIAAMEKSKLVYILNRDAATNLTISSPLEAHRNQSILFHITGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY E+DQD TG+A   A+K LTFYELDLGLNHV RKWSEP D  AN LV VPG
Sbjct: 181  LFAALEIDYGESDQDPTGEAFHNAEKMLTFYELDLGLNHVVRKWSEPTDPRANFLVQVPG 240

Query: 240  GG--------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRR-ADLPAE-RGVLIVSAATH 289
            G         DGPSGVLVC EN +IY++  HP  R  IPRR A L +E RG++IV+A  H
Sbjct: 241  GTSASSPDKFDGPSGVLVCCENHIIYRHMDHPQHRVPIPRRRAPLDSEERGLIIVAAVMH 300

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            + K  FFFLLQ+E GD++KVT++H ++ V+ LKIKYFDT+PV++S+C+LKSG+LF AS+F
Sbjct: 301  KMKGAFFFLLQSEEGDLYKVTIDHQDDEVTSLKIKYFDTVPVSSSLCILKSGFLFVASDF 360

Query: 350  GNHALYQFQAIGAD-PDVEASSST-----LMETEEGFQPVFFQPRGLKNLVRIEQVESLM 403
            G H LYQFQ +G D  + E SSS+     + + +E     +FQPR L+NL+  + ++S+ 
Sbjct: 361  GPHHLYQFQKLGDDDAETEFSSSSYPKNGMADPDEALPSAYFQPRLLENLLLCDSLDSIN 420

Query: 404  PIMDMRIANLFE--EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLP-GVPSAVWTV 460
            PI+D ++ NL     + PQ +  CGRG RSS R+LR GL V E   S LP G+P+AVWT 
Sbjct: 421  PIIDAKVLNLMPTISDTPQFYVACGRGARSSFRLLRHGLEVEENISSDLPSGIPNAVWTT 480

Query: 461  KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPS 520
            K   +D FD YIV+SF N TLVL+IGET+EE  ++GFL   P+L V  IGDD+L+QV+P 
Sbjct: 481  KIRADDPFDTYIVLSFVNGTLVLTIGETIEECQETGFLSAEPTLGVQQIGDDALLQVYPH 540

Query: 521  GIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
            GIRHI  D R+NEW+ P  +TIV+  +N  QVV+AL+  EL+YFE+D+ GQL E +  + 
Sbjct: 541  GIRHILADKRVNEWKVPSGKTIVQAATNSRQVVVALNSAELVYFELDLDGQLNEYQDRKA 600

Query: 581  SGDVA-CLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLF 639
             G V   L +A VPEG +R+ +LAVG  D T+RI+SLDPD+ ++ +S+Q++++PP ++  
Sbjct: 601  MGSVVLALSMAEVPEGCQRTPYLAVGCEDQTVRIISLDPDNTLETISLQALTAPPSAICI 660

Query: 640  LE-VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
            +  + A+V          +LF+N GL NG+  RTV+D VTG+L+D+R+RFLG RP +L  
Sbjct: 661  VAMIDAAVNKIS-----ETLFVNIGLTNGLFLRTVLDPVTGELTDTRTRFLGTRPIRLNR 715

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
            V + G+ A+L LSSR WL Y H+    LTPL ++ L+Y + F++D C +G + + G+ ++
Sbjct: 716  VTIAGKPALLALSSRMWLNYAHQEALHLTPLIFDPLDYVSGFTADLCPDGFIGLKGSTIK 775

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAA 818
            +F I ++G+      +PL YTPR+  + P   L  I E+D    + E    A ++     
Sbjct: 776  IFQITKIGQRLKHEVMPLSYTPRKIAVHPMNGLFYIAESDHRTHSQEAVHGALQQ----- 830

Query: 819  GMGENGNGNMDQMENGDDENKYD----PLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                             D  KYD     L  E +G+P+A +  W SC+R+++P    T  
Sbjct: 831  ----------------PDLKKYDRDVLELPPEVFGHPRAPAGIWASCVRIVNPVELTTIY 874

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
             L+L +NEAAFSI  V F  +++   L VGTAK   F   R+  +GY+  YR +++G+ L
Sbjct: 875  RLDLDNNEAAFSIALVPFSARDNELTLVVGTAKD-AFLAPRSCTSGYLRTYRVLDDGRGL 933

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
            ELLHKT+ + IPL+L  FQG+L+AGIG  LR+YD+GKK+LLRK E+KLF   I S++T  
Sbjct: 934  ELLHKTECDDIPLSLLAFQGKLVAGIGKCLRIYDMGKKKLLRKAESKLFTTAITSLSTQG 993

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
             RI  GD Q+S  FC Y+  EN+L +FADDS  RW T+   +D++T+   DKFGN++  R
Sbjct: 994  ARIIAGDAQQSIFFCVYKAAENRLLVFADDSQQRWTTSQLMLDYNTVVAGDKFGNVFVNR 1053

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESV 1114
            L   VS+ +++DPTG  +  E+G   GAP+K   +  FHVGD++ SLQ+ SLVPGG E +
Sbjct: 1054 LSDHVSNLVDDDPTGAGLLHEKGMFMGAPHKTSMLCHFHVGDIIMSLQRTSLVPGGREVI 1113

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGD 1174
            +Y  + G++G ++ F+S++DVDFF+ LE HMR E+  L  RD +A+R  Y PVK V+DGD
Sbjct: 1114 VYFGLHGTIGMLVPFASKEDVDFFTTLEQHMRSENLSLVSRDILAWRGYYVPVKAVVDGD 1173

Query: 1175 LCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            LCE F  L    Q  +A ELDRT GE+LKKLE IR
Sbjct: 1174 LCEYFAKLPQGKQGGLAGELDRTVGEVLKKLEMIR 1208


>gi|255946770|ref|XP_002564152.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591169|emb|CAP97395.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1209

 Score = 1221 bits (3158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1228 (50%), Positives = 827/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GT+  +IV A G  L + RP+ + G+I  L S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTRDQQIVTASGSKLTIHRPDPAQGKITPLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FR+ GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRVAGSSKDYIIIGSDSGRITIVEYVPSQNRFNRIHMETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK   +V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQNLVFAMICLDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSEADQD TGQA  E +K L +YELDLGLNHV RKWS+PVD  A+ML  VPG
Sbjct: 187  VFAALEVDYSEADQDPTGQAYEEIEKVLVYYELDLGLNHVVRKWSDPVDRTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ V Y++      R  IPRR  A    ER   IVS   H+ +  FFF
Sbjct: 247  GDDGPSGVLVCAEDNVTYRHSNQGAFRVPIPRRSGATENPERKRSIVSGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FK+ LE   D +      V  L IKYFDTIPV+ ++ +LKSG+L+AASE G
Sbjct: 307  LLQTEDGDLFKLNLEMVEDKQGKPTGEVKRLTIKYFDTIPVSTNLLILKSGFLYAASESG 366

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEG--FQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G DP     SS     +      P++F PRG +N+  +E + SL P++D 
Sbjct: 367  NHNFYQFEKLGDDPSEAFFSSDSFSADPSVPLTPIYFHPRGAENVNLMESMNSLSPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQI+T+CG G RS+ R L+ GL VSE+  S L  VPSAVWT K    DEF
Sbjct: 427  KILNLSEDDAPQIYTICGSGARSTFRTLKHGLEVSEIVESDLQQVPSAVWTTKLTRGDEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
              YI++SF N TLVLSIGE VEEVSD+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  HTYIILSFANGTLVLSIGEIVEEVSDTGFLSSAPTLAVQQLGEDSLVQVHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V  L
Sbjct: 547  QRVNEWPAPQHRSIVAAAANERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTSL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSL+PD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SMGEVPEGRMRSSFLAVGCDDSTVRILSLNPDSTLENKSVQALTSAPSALQIMAMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RF+G +P KL  V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFIGAKPVKLSQVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LS+RPWLGY  +    F+LTPL Y  LE+  +FSS+QCVEG++ + G +LR+FT+E+L
Sbjct: 721  LALSTRPWLGYSDVQTKSFMLTPLDYVGLEWGWNFSSEQCVEGMIGIQGRSLRIFTVEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL YTPRRFV  P++ L  +IE+D   L+   R+    +            
Sbjct: 781  DNNMLQESIPLSYTPRRFVKHPEQPLFYVIESDNNVLSPATRQRLIDDS----------- 829

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL-LELQDNEAA 884
                Q +NG+  +    L    +GYP+A +  W SCI+V++P +  +    L+L+DNEAA
Sbjct: 830  ----QAQNGEATD----LPPADFGYPRA-TGHWASCIQVVEPITTKSVIFNLDLEDNEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V+F  ++  T L VGTAK +   P  +   G+IHIYRF E+G+ LE +HKTQV+ 
Sbjct: 881  VSLAAVSFSSQDDETFLVVGTAKDMTVSPPSS-SCGFIHIYRFQEDGRELEFIHKTQVDE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRLLAGIGP+LR+YDLG K+LLRKC+  + P TIV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLLAGIGPILRVYDLGMKQLLRKCQAPVVPKTIVGLQTQGSRIIVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  +N L  FADDS+ RW ++   +D++T AG DKFGN++ VR P  VS++ +
Sbjct: 1000 SVTYVVYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDKFGNLWLVRCPSKVSEQAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L+G P+++E +V F+  D+ TSL K  LV GG + V++    G++G
Sbjct: 1060 EDGSGAHLIHEKGYLHGTPHRLELMVHFYAQDIPTSLHKTQLVAGGRDIVVWTGFQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
              + F+SR+DVDFF  LE  +  + PPL GRDH+ YR  Y PVK VIDGDLCE +  L  
Sbjct: 1120 MFVPFASREDVDFFQLLETQLASQQPPLAGRDHLMYRGYYAPVKGVIDGDLCEMYLLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1180 DTKLMIAGELDRSVREIERKISDMRTRV 1207


>gi|159130328|gb|EDP55441.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus A1163]
          Length = 1225

 Score = 1220 bits (3157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1221 (51%), Positives = 826/1221 (67%), Gaps = 43/1221 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G+I  + S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRTLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DYSEADQD TG+A  E++K L +YELDLGLNHV RKW++PVD  A+ML  VPG
Sbjct: 187  IFAALEVDYSEADQDPTGRAYEESEKLLVYYELDLGLNHVVRKWADPVDRTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ + Y++      R  IPRR  A    ER   IV+   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRIGATENPERKRSIVAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E DN      V  LKIKYFDT+P+ +S+ +LKSG+L+ ASE G
Sbjct: 307  LLQTEDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPIASSLLILKSGFLYVASEAG 366

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEGF--QPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D +    +S     +     +PVFF+PRG +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEETEFNSENFPADLSVPCEPVFFRPRGAENLNLVETLNSLNPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQI+T+ G G RSS R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF N TLVLSIGETVEEV+D+GFL T P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  I    F+LTPL Y  LE+  +FSS+QCVEG+V +    LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL  TPRR +  P++ L  +IE+D   L+   R    ++         NG 
Sbjct: 781  DNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARLIEDS-----KARNGE 835

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDNEAA 884
             N+              L  E +GYP+A +  W SCI+++DP  A      +EL++NEAA
Sbjct: 836  TNV--------------LPPEDFGYPRA-TGHWASCIQIVDPLDAKAVISTIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGTAK +   P  +   G+IHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSMAAVPFSSQDDETFLVVGTAKDMIVNPPSS-AGGFIHIYRFQEDGKELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRLLAGIG  LR+YDLG K+LLRKC+ ++   TIV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLLAGIGSTLRIYDLGMKQLLRKCQAQVVSKTIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  +N L  F DDSV RW T+   +D++T+AG DKFGN++ VR P+  S+E +
Sbjct: 1000 SVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L+GAPN+++ ++  +  D+ TSL K  LV GG + +++    G++G
Sbjct: 1060 EDGSGAHLIHERGYLHGAPNRLDLMIHTYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF +LEM +  + PPL GRDH+ YRS Y PVK VIDGDLCE +  L  
Sbjct: 1120 MLVPFVSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKL 1205
            D +  IA ELDR+  EI +K+
Sbjct: 1180 DTKMMIAAELDRSVREIERKI 1200


>gi|303324325|ref|XP_003072150.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
            delta SOWgp]
 gi|240111860|gb|EER30005.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
            delta SOWgp]
          Length = 1209

 Score = 1220 bits (3156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1228 (50%), Positives = 825/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G FSG K  +IV+A G  L +  P+ + G+I TL S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAIIGQFSGVKEQQIVIASGSKLSIHEPDSHQGKIRTLYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRIAIVEYVPSQNRFNRIHLETFGKSGIRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTLVFALTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DY+E+DQD TG A  EA+K L +YELDLGLNHV R+W++PVD  A ML  VPG
Sbjct: 187  IFAALEVDYTESDQDPTGAAYQEAEKLLVYYELDLGLNHVVRRWADPVDRSAAMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVC+E  + Y++      R  IPRR+      ER   I +   H+ +  FF 
Sbjct: 247  GADGPSGVLVCSEGNITYRHSNQDAFRVPIPRRSGPTENPERKRYITAGVVHKMRRAFFC 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E +N      V  LK+KYFDT+PV +S+C+LK+G+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCILKNGFLFVASETG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D + E SS     +  E   PV+F+PR  +NL  +E + SL P+M  
Sbjct: 367  NHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLVESINSLNPLMSC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQ +TL G G RS+ R L+ GL VSE+  S+LP VPSAVWT K   ND++
Sbjct: 427  KITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQY 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VP GR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPPGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMVDSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+  KLFSV V  + A+
Sbjct: 667  GG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKSVKLFSVSVKEQRAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  +    F+LTPL Y  LE++ +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  +PL YTPR FV  P++ L  +IE D   L+   +    ++   A       N
Sbjct: 781  DNNLLQETIPLAYTPRHFVRHPEQPLFYVIEADNNILSPSTKAKLLQDSKAA-------N 833

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEAA 884
            G + +            L  E +GYP+  +  W SCI+V+DP  S      +EL++NEAA
Sbjct: 834  GEVAE------------LPPEDFGYPRG-TGHWASCIQVVDPINSKAVISRIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGT K +  +P  +   G+IHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSVAAVPFSSQDDETFLVVGTGKDMVVYPPSS-SCGFIHIYRFQEDGKELEFIHKTKVES 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P AL  FQGRLLAGIG  LR+YDLG K+LLRKC+ ++ P  IV + T   RI V D+QE
Sbjct: 940  PPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRLIVGLQTQGSRIIVSDVQE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN+L  FADD + RW T    +D++T+AG DKFGN++ +R PQ  S+E +
Sbjct: 1000 SVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFGNLWLLRCPQKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+  L GAPN++  +V F+  D+ TS+QK  LV GG + +++  + G++G
Sbjct: 1060 EDGSGAHLIHERQYLQGAPNRLSLMVHFYPQDIPTSIQKTQLVAGGRDILVWTGLQGTVG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF  LEM +  + PPL GRDH+ YRS Y P K  IDGDLCE + TL  
Sbjct: 1120 MLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDHLIYRSYYAPAKGTIDGDLCETYFTLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +  IA ELDR+  EI +K+ ++R K+
Sbjct: 1180 DKKLMIAGELDRSVREIERKISDMRTKV 1207


>gi|425768510|gb|EKV07031.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum PHI26]
 gi|425775700|gb|EKV13954.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum Pd1]
          Length = 1209

 Score = 1219 bits (3154), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1228 (50%), Positives = 825/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT +  A+ G F+GT+  +IV + G  L + RP+ + G+I  L S ++FG
Sbjct: 7    MFMYSLTIQPPTAVTQAVLGQFAGTRDQQIVTSSGSKLTIHRPDPAQGKITPLYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FR+ GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRVAGSNKDYIIIGSDSGRITIVEYVPSQNRFNRIHMETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++  +D G+DNP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMICLDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE+DQD TGQA  E +K L +YELDLGLNHV RKWS+ VD  A+ML  VPG
Sbjct: 187  VFAALEVDYSESDQDPTGQAYEEIEKVLVYYELDLGLNHVVRKWSDTVDRTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVC E+ + Y++      R  IPRR  A    ER   IVS   H+ +  FFF
Sbjct: 247  GDDGPSGVLVCGEDNITYRHSNQGAFRVPIPRRSGATENPERKRSIVSGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FK+ LE   D +      V  L IKYFDTIPV+ ++ +LKSG+L+AASE G
Sbjct: 307  LLQTEDGDLFKLNLEMVEDKQGQPTGEVKRLTIKYFDTIPVSTNLLILKSGFLYAASESG 366

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEGF--QPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G DPD    SS     +      PVFF PRG +N+  +E + SL P++D 
Sbjct: 367  NHNFYQFEKLGDDPDELFFSSDSFSADHSVPSAPVFFHPRGAENVNLMESMNSLSPLIDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQI+T+CG G RSS R L+ GL VSE+  S L  VPSAVWT K    DEF
Sbjct: 427  KILNLSEDDAPQIYTICGSGARSSFRTLKHGLEVSEIVESDLQQVPSAVWTTKLTRADEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
              YI++SF N TLVLSIGE VEEVSD+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  HTYIILSFANGTLVLSIGEIVEEVSDTGFLSSAPTLAVQQLGEDSLVQVHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V  L
Sbjct: 547  QRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTSL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SMGEVPEGRMRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALQIMAMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RF+G +P KL  V V G+ A+
Sbjct: 667  GG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFIGAKPVKLSQVSVKGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LS+RPWLGY  I    F+LTPL Y  LE+  +FSS+QCVEG++ + G +LR+FT+E+L
Sbjct: 721  LALSTRPWLGYSDIQTKSFMLTPLDYVGLEWGWNFSSEQCVEGMIGIQGRSLRIFTVEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL YTPRRFV  P + L  +IE+D   L+   R+    +            
Sbjct: 781  DNNMLQESIPLSYTPRRFVKHPDQHLFYVIESDNNVLSPATRQRLIDDS----------- 829

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDNEAA 884
                Q +NG+  +    L    +GYP+A +  W SC++++DP +  +    L+L+DNEAA
Sbjct: 830  ----QAQNGEVAD----LPPADFGYPRA-TGHWASCVQIVDPITTKSVISTLDLEDNEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V+F  ++  T L VGTAK +   P  +   G+IHIYRF E+G+ LE +HKTQV+ 
Sbjct: 881  VSLAAVSFSSQDDETFLVVGTAKDMTVSPPSS-SCGFIHIYRFQEDGRELEFIHKTQVDE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRLLAGIGPVLR+YDLG K+LLRKC+  + P TIV + T   RI V DI+E
Sbjct: 940  PPLALLGFQGRLLAGIGPVLRVYDLGMKQLLRKCQAPVVPKTIVGLQTQGSRIIVSDIRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  +N L  FADDS+ RW ++   +D++T AG DKFGN++ VR P  +S++ +
Sbjct: 1000 SVTYVVYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDKFGNLWLVRCPSKISEQAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G L+G P+++E +V F   D+ TSL K  LV GG + V++  + G++G
Sbjct: 1060 EDGSGAHLIHEKGYLHGTPHRLELMVHFFAQDIPTSLHKTQLVAGGRDIVVWTGLQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
              + F SR+DVDFF  LE  +  + PPL GRDH+ YR  Y PVK VIDGDLCE +  L  
Sbjct: 1120 MFVPFVSREDVDFFQLLETQLASQQPPLAGRDHLMYRGYYAPVKGVIDGDLCEMYLLLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1180 DTKLMIAGELDRSVREIERKISDMRTRV 1207


>gi|357528934|sp|Q5B1X8.2|RSE1_EMENI RecName: Full=Pre-mRNA-splicing factor rse1
 gi|259485100|tpe|CBF81885.1| TPA: Pre-mRNA-splicing factor rse1
            [Source:UniProtKB/Swiss-Prot;Acc:Q5B1X8] [Aspergillus
            nidulans FGSC A4]
          Length = 1209

 Score = 1217 bits (3148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1228 (50%), Positives = 823/1228 (67%), Gaps = 43/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G++  L + ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVIPLYTQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRTLAAFRLAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+VYS+  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVYSVVALDAGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE+DQD TG+A  E +K L +YELDLGLNHV RKW++PVD  ++ML  VPG
Sbjct: 187  VFAALEVDYSESDQDPTGRAYEEVEKLLVYYELDLGLNHVVRKWTDPVDRTSSMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ + Y++      R  IPRR  A    ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRKGAMENPERKRCITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FK+TL+   D++      V  LKIKYFDT+P+ +S+ +LKSG+L+ A+E G
Sbjct: 307  LLQTEDGDLFKLTLDMVEDDKGQLTGEVKGLKIKYFDTVPLASSLLILKSGFLYVAAEGG 366

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEGF--QPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D +    +S     +      PV+FQPRG +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEETEFNSDDFSADPAAPCTPVYFQPRGAENLNLVEAINSLNPLVDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ N+ E++APQIFT+ G G RS+ R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KVVNISEDDAPQIFTVSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYIV+SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+Q+HP GIRHI  D
Sbjct: 487  DAYIVLSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFELDADGSLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ++++ P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDTTLENKSVQALTAAPSALNIIAMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RT +D VTG+LSD+R+RFLG +  KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLHSGVYLRTALDEVTGELSDTRTRFLGSKAVKLFQVSVTGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY       F+LTPL Y  LE+  +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDTQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL YTPR F+  P++ L  +IE D   L+     A +    E         
Sbjct: 781  DNNMLQQSIPLAYTPRHFIKHPEEPLFYVIEADNNVLSP----ATRARLLE--------- 827

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
               D    G D     P   E +GYP+  +  W SCI+++DP  A      +EL++NEAA
Sbjct: 828  ---DSKARGGDTTVLPP---EDFGYPRG-TGHWASCIQIIDPLDAKAVVGAVELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             SI  V F  ++  T L VGTAK +   P  +   GYIHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSIAAVPFTSQDDETFLVVGTAKDMTVNPPSS-AGGYIHIYRFQEDGKELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRLLAG+G VLR+YDLG K+LLRKC+  + P  IV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLLAGVGSVLRIYDLGMKQLLRKCQAAVAPKAIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  +N L  F DDS+ RW TAA  +D++T AG DKFGN++ VR P+  S+E +
Sbjct: 1000 SVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDKFGNLWLVRCPKKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            E+ +G  +  ++G L G PN++E ++     D+ TSL K  LV GG + +++    G++G
Sbjct: 1060 EEGSGAHLIHDRGYLQGTPNRLELMIHVFTQDIPTSLHKTQLVAGGRDILVWTGFQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF  LEM +  + PPL GRDH+ YRS Y PVK VIDGDLCEQ+  LS 
Sbjct: 1120 ILVPFVSREDVDFFQSLEMQLASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEQYFLLSN 1179

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKI 1212
            D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1180 DTKMMIAAELDRSVREIERKISDMRTRV 1207


>gi|119173562|ref|XP_001239205.1| hypothetical protein CIMG_10227 [Coccidioides immitis RS]
          Length = 1208

 Score = 1215 bits (3144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1221 (50%), Positives = 820/1221 (67%), Gaps = 43/1221 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G FSG K  +IV+A G  L +  P+ + G+I TL S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAIIGQFSGVKEQQIVIASGSKLSIHEPDSHQGKIRTLYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRIAIVEYVPSQNRFNRIHLETFGKSGIRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTLVFALTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DY+E+DQD TG A  EA+K L +YELDLGLNHV R+W++PVD  A ML  VPG
Sbjct: 187  IFAALEVDYTESDQDPTGAAYQEAEKLLVYYELDLGLNHVVRRWADPVDRSAAMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVC E  + Y++      R  IPRR+      ER   I +   H+ +  FF 
Sbjct: 247  GADGPSGVLVCGEGNITYRHSNQDAFRVPIPRRSGPTENPERKRYITAGVVHKMRRAFFC 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E +N      V  LK+KYFDT+PV +S+C+LK+G+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCILKNGFLFVASETG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D + E SS     +  E   PV+F+PR  +NL  +E + SL P+M  
Sbjct: 367  NHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLVESINSLNPLMSC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            +I NL E++APQ +TL G G RS+ R L+ GL VSE+  S+LP VPSAVWT K   ND++
Sbjct: 427  KITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQY 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  D
Sbjct: 487  DAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VP GR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPPGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMVDSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+P KLFSV V  + A+
Sbjct: 667  GG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQRAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY  +    F+LTPL Y  LE++ +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  +PL YTPR FV  P++ L  +IE D   L+   +    ++   A       N
Sbjct: 781  DNNLLQETIPLAYTPRHFVRHPEQPLFYVIEADNNILSPSTKAKLLQDSKAA-------N 833

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEAA 884
            G + +            L  E +GYP+  +  W SCI+V+DP  S      +EL++NEAA
Sbjct: 834  GEVAE------------LPPEDFGYPRG-TGHWASCIQVVDPINSKAVISRIELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+  V F  ++  T L VGT K +  +P  +   G+IHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSVAAVPFSSQDDETFLVVGTGKDMVVYPPSS-SCGFIHIYRFQEDGKELEFIHKTKVES 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P AL  FQGRLLAGIG  LR+YDLG K+LLRKC+ ++ P  IV + T   RI V D+QE
Sbjct: 940  PPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRLIVGLQTQGSRIIVSDVQE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  EN+L  FADD + RW T    +D++T+AG DKFGN++ +R PQ  S+E +
Sbjct: 1000 SVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFGNLWLLRCPQKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+  L GAPN++  +V F+  D+ TS+QK  LV GG + +++  + G++G
Sbjct: 1060 EDGSGAHLIHERQYLQGAPNRLSLMVHFYPQDIPTSIQKTQLVAGGRDILVWTGLQGTVG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF  LEM +  + PPL GRDH+ YRS Y P K  IDGDLCE + TL  
Sbjct: 1120 MLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDHLIYRSYYAPAKGTIDGDLCETYFTLPN 1179

Query: 1185 DLQRKIADELDRTPGEILKKL 1205
            D +  IA ELDR+  EI +K+
Sbjct: 1180 DKKLMIAGELDRSVREIERKI 1200


>gi|440636768|gb|ELR06687.1| pre-mRNA-splicing factor rse1 [Geomyces destructans 20631-21]
          Length = 1212

 Score = 1213 bits (3138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1231 (49%), Positives = 835/1231 (67%), Gaps = 48/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT +  AI G F+GTK  +IV A G  L L RP+ S G+I T ++ ++FG
Sbjct: 7    MFMYSLTIQPPTAVTQAILGQFAGTKEQQIVTASGSRLTLHRPDPSQGKIVTALTHDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++GSDSGRI I+E+ P++N F+++H ETFGKSG RR++PGQY
Sbjct: 67   IIRTLAAFRLAGSNKDYIIIGSDSGRITIVEFVPAQNRFNRLHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK+ T+V+++  +D G+ NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY ++DQD TGQA  E +K L +YELDLGLNHV RKWS+PVD  A++L  VPG
Sbjct: 187  VFAALEVDYGDSDQDPTGQAFEEIEKTLVYYELDLGLNHVVRKWSDPVDRTASILFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E+ + Y++      R  IPRR  A    +R   IV+   H+ +     
Sbjct: 247  GTDGPSGVLVCGEDNITYRHSNQEAFRVAIPRRKGATEDPQRKRSIVAGVMHKMRGAAGA 306

Query: 295  FFFLLQTEYGDIFKVT---LEHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQ++ GD+FK+T   +E DN      V  LKIKYFDT+P+  S+C+LKSG+LF AS
Sbjct: 307  FFFLLQSDDGDLFKITIEMIEDDNGQPTGEVRRLKIKYFDTVPIATSLCILKSGFLFVAS 366

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D D     S    T+  E + PV+F PR  +NL  +E ++S+ P+
Sbjct: 367  EFGNHQFYQFEKLGDDDDETEYISDNFPTDPAEPYTPVYFHPRPAENLNLVESIDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            MD ++ANL EE+APQI+++CG G RS+ R L+ GL V+E+  S+LPGVPSAVWT K    
Sbjct: 427  MDCKVANLTEEDAPQIYSICGTGARSTFRTLKHGLEVNEIVESELPGVPSAVWTTKLTRG 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            DE+DAYI+++F+N TLVLSIGETVEEV+D+GFL +  +LAV  +G+D L+QVHP GIRHI
Sbjct: 487  DEYDAYIILAFSNGTLVLSIGETVEEVTDTGFLSSATTLAVQQLGEDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R D R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V
Sbjct: 547  RADRRVNEWAAPQHRSIVAATTNAQQVAVALSSGEIVYFEMDSDGSLAEYDEKREMSGTV 606

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P SL  + +  
Sbjct: 607  TCLSLGEVPEGRVRSNFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSSLSIMAMTD 666

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S  G       ++L+L+ GL +GV  RTV+D +TG+LSD+R+RFLG +P KLF V V G+
Sbjct: 667  SSSGG------STLYLHIGLYSGVYLRTVLDEITGELSDTRTRFLGPKPAKLFRVSVQGQ 720

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
             A+L LSSRPWLGY   + +G F+LTPL Y  LE+  +FSS+QC EG+V + G  LR+F+
Sbjct: 721  TAVLALSSRPWLGYSDPVTKG-FMLTPLDYAGLEWGWNFSSEQCPEGMVGIQGQNLRIFS 779

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+L E   + ++PL YTPRRFV  P+     +I++D   L+    ++ K++  E     
Sbjct: 780  IEKLTENLLQHSIPLSYTPRRFVKHPEHPYFYVIQSDNNILS----KSTKQKLLEDP--- 832

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQD 880
                     ++NGD       L  E++GYP+     W SCI+++DP R       ++L+D
Sbjct: 833  --------SLQNGDSA----VLPAEEFGYPRGRG-HWASCIQIVDPIREKKVLQQIDLED 879

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S+ TV+F  +E    L VGT K +   P R+   G+IH+YRF E+GK +E +HKT
Sbjct: 880  NEAAVSMATVSFASQEDEVFLVVGTGKDMVASP-RSSSGGFIHVYRFHEDGKEIEFIHKT 938

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +VE  PLAL  FQGRLL GIG  LR+YDLG ++LLRK + ++  + IV + T   RI V 
Sbjct: 939  KVEEPPLALLGFQGRLLVGIGRELRIYDLGMRQLLRKAQTEIAASLIVGLQTQGSRIIVS 998

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+QES  F  Y+  EN+L  FADD++ RW T    +D++T+AG DKFGN++ +R P   S
Sbjct: 999  DVQESITFVVYKFQENKLIPFADDTIARWTTCTTMVDYETVAGGDKFGNLWLLRCPTKAS 1058

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            +E +E+ +G  +  E+  L GAP+++  +      D+ TS+QK +LV GG + +++  + 
Sbjct: 1059 EEADEEGSGAHLVHERQYLQGAPHRVALMAHNFANDIPTSIQKTNLVAGGRDCLLWSGLQ 1118

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++  M+ F SR+DVDFF  LE H+R E  PL GRDH+ YRS Y PVK VIDGDLCE++ 
Sbjct: 1119 GTIAIMIPFVSREDVDFFQTLEQHLRTEDAPLAGRDHLIYRSYYVPVKGVIDGDLCERYT 1178

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             L  D +  IA E DR+  EI +K+ ++R +
Sbjct: 1179 LLPTDKKMMIAGEFDRSVREIERKISDMRTR 1209


>gi|323508292|emb|CBQ68163.1| probable splicing factor 3B subunit 3 [Sporisorium reilianum SRZ2]
          Length = 1221

 Score = 1212 bits (3137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1236 (50%), Positives = 833/1236 (67%), Gaps = 51/1236 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPEN-SGRIETLVSTEIFG 59
            M+LY+LTLQ    + A + G FSGT+  EIVVA+G  LELLRP+  +G++ET++S + FG
Sbjct: 4    MHLYNLTLQPSGSVNATVVGQFSGTRQQEIVVAKGSRLELLRPDTQTGKVETVLSHDAFG 63

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RSLA FRLTG  KDY++VGSDSGRIVILEY    N FDK+HQETFG+SG RRIVPGQY
Sbjct: 64   VVRSLAAFRLTGGSKDYLIVGSDSGRIVILEYQSRTNSFDKVHQETFGRSGSRRIVPGQY 123

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA MIGA EK KLVY+LNRD  A LTISSPLEAH+ + I++ I G+D GF+NP
Sbjct: 124  LATDPKGRAAMIGAMEKAKLVYILNRDAQANLTISSPLEAHRPNGIIHHIIGVDVGFENP 183

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DYSE+D D +G+A  EA+K LT+YELDLGLNHV RKWSEPVD+ +N+L+ VPG
Sbjct: 184  LFACLEVDYSESDHDPSGRAFEEAEKALTYYELDLGLNHVVRKWSEPVDSRSNLLIQVPG 243

Query: 240  G-------GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE-----RGVLIVSAA 287
            G        DGPSGVLVC+E+++ YK+Q  P+ R  IP+R + P E     RG LIV++ 
Sbjct: 244  GYNQNLEKWDGPSGVLVCSEDYITYKHQDQPEHRVPIPKRLN-PVEKSSERRGTLIVASV 302

Query: 288  THRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
             H+ K  FFFL+Q+E GD+FKVT+EH ++ +  LKIKYFDT+PV + + +L+SG+LF AS
Sbjct: 303  LHKMKNAFFFLVQSEDGDLFKVTMEHQDDEIRSLKIKYFDTVPVASGLAILRSGFLFVAS 362

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETEEGF-----QPVFFQPRGLKNLVRIEQVESL 402
            EFG   LY FQ +G D D+   SST  + E G      Q   F PR L NLV+++++ SL
Sbjct: 363  EFGPQLLYSFQKLGDDDDLPEYSSTDYD-ENGAGRRRPQLPTFTPRPLDNLVQVDEMPSL 421

Query: 403  MPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
             PI+D +  N    ++PQIF  CGRG RSS ++LR GL   E   S LPGVPSAVWT K 
Sbjct: 422  DPILDAKPLNPLASDSPQIFAACGRGARSSFKMLRHGLEAQEAVSSDLPGVPSAVWTTKI 481

Query: 463  NVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
               DE D+YI++SF N TLVLSIGET+EEVSDSGFL ++ +LAV  +G+D+L+QVHP GI
Sbjct: 482  TRQDEHDSYIILSFVNGTLVLSIGETIEEVSDSGFLTSSSTLAVQQLGEDALLQVHPHGI 541

Query: 523  RHIREDGRINEWRTPG-----KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-E 576
            RHI  D +INEW TP      + TIV   +N  QVV+A S  EL+YFE+DM GQL E  E
Sbjct: 542  RHILVDKQINEWATPSLPNGRQTTIVATCTNERQVVVAFSSNELVYFELDMDGQLNEYQE 601

Query: 577  KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPES 636
            +  M   V  + +A  PEGR+R+ +LAVG  D+T+RI+SL+P+  +  +S+Q++++P  S
Sbjct: 602  RKAMGAAVLTMSMADCPEGRQRTPYLAVGCDDSTVRIISLEPNSTLASISIQALTAPASS 661

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            +   E+  +    + A    + F+N GLQNGVL RTV+D VTGQL+D+R+RFLG +  +L
Sbjct: 662  ICMAEMHDATIDRNHA----TTFVNIGLQNGVLLRTVLDAVTGQLTDTRTRFLGSKAVRL 717

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                V G++A++ LS+R WL + ++ R    PL ++ L++A SFS++ C EG++ + G+ 
Sbjct: 718  IRTKVHGQSAVMALSTRTWLSFTYQDRLQFVPLIFDALDHAWSFSAELCPEGLIGIVGST 777

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKK-LMVIIETDQGALT--AEEREAAKKE 813
            LR+FT+  L     + ++ L YTPR+F   P ++ L  ++E +   L+  A+ R   + E
Sbjct: 778  LRIFTMPSLASKLKQDSVALSYTPRKFAHHPNEQGLFYVVEAEHRTLSPGAQRR---RTE 834

Query: 814  CFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT 873
              E   +  +  G +D             L+  ++G  +AE+  W SC+RV+D   + TT
Sbjct: 835  MLEKE-LKPHQRGVLD-------------LNPAEFGLIRAEAGNWASCVRVVDGVQSQTT 880

Query: 874  CLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKS 933
              LEL DNEAAFS+  V F   E   +L VG+A  +   P R+    Y+  YR    G+ 
Sbjct: 881  HKLELDDNEAAFSVAVVPFASAEKEAMLVVGSAVDVVLSP-RSFKKAYLTTYRLTNNGRE 939

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTY 993
            LE+LHKT+V+ IPL L  FQGRLLAGIG  LR+YDLGKK+LLRKCENK F   IVS++  
Sbjct: 940  LEVLHKTEVDDIPLVLRPFQGRLLAGIGKALRIYDLGKKKLLRKCENKSFATAIVSLDAQ 999

Query: 994  RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
              RI VGD+QES  F  Y+  EN+L  FADD +P+++T    +D+DT+A ADKFGN+Y +
Sbjct: 1000 GSRIVVGDMQESIIFTSYKPLENRLVTFADDVMPKFVTRCAMLDYDTVAAADKFGNVYVL 1059

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES 1113
            R+  D S  ++EDPTG  I  E+  L GA +K   +  F VGD+VTSL +  +VPGG E 
Sbjct: 1060 RIDADTSRSVDEDPTGMTIVHEKPVLMGAAHKATLVAHFFVGDIVTSLNRTVMVPGGREV 1119

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDG 1173
            ++Y  V G++GA++ F S++DVD  S LE H+RQE+  L GRDH+AYRS+Y PVK VIDG
Sbjct: 1120 LLYTGVSGTIGALVPFVSKEDVDTLSTLESHLRQENSSLVGRDHLAYRSSYAPVKSVIDG 1179

Query: 1174 DLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            DLCE F  L    Q  IA ELDR P EI KKL ++R
Sbjct: 1180 DLCETFGLLPPAKQNAIATELDRKPSEINKKLAQLR 1215


>gi|67538564|ref|XP_663056.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
 gi|40743422|gb|EAA62612.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
          Length = 1226

 Score = 1211 bits (3134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1221 (50%), Positives = 818/1221 (66%), Gaps = 43/1221 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+GTK  +IV A G  L + RP+   G++  L + ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVIPLYTQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRTLAAFRLAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+VYS+  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVYSVVALDAGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE+DQD TG+A  E +K L +YELDLGLNHV RKW++PVD  ++ML  VPG
Sbjct: 187  VFAALEVDYSESDQDPTGRAYEEVEKLLVYYELDLGLNHVVRKWTDPVDRTSSMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ + Y++      R  IPRR  A    ER   I +   H+ +  FFF
Sbjct: 247  GADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRKGAMENPERKRCITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FK+TL+   D++      V  LKIKYFDT+P+ +S+ +LKSG+L+ A+E G
Sbjct: 307  LLQTEDGDLFKLTLDMVEDDKGQLTGEVKGLKIKYFDTVPLASSLLILKSGFLYVAAEGG 366

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEG--FQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D +    +S     +      PV+FQPRG +NL  +E + SL P++D 
Sbjct: 367  NHHFYQFEKLGDDDEETEFNSDDFSADPAAPCTPVYFQPRGAENLNLVEAINSLNPLVDS 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ N+ E++APQIFT+ G G RS+ R L+ GL VSE+  S+LP VPSAVWT K    DEF
Sbjct: 427  KVVNISEDDAPQIFTVSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRADEF 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYIV+SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+Q+HP GIRHI  D
Sbjct: 487  DAYIVLSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHILAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ +MSG V CL
Sbjct: 547  RRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFELDADGSLAEYDERRQMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ++++ P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDTTLENKSVQALTAAPSALNIIAMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +L+L+ GL +GV  RT +D VTG+LSD+R+RFLG +  KLF V V G+ A+
Sbjct: 667  GG------TTLYLHIGLHSGVYLRTALDEVTGELSDTRTRFLGSKAVKLFQVSVTGQTAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L LSSRPWLGY       F+LTPL Y  LE+  +FSS+QCVEG+V + G  LR+F+IE+L
Sbjct: 721  LALSSRPWLGYSDTQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 + ++PL YTPR F+  P++ L  +IE D   L+     A +    E         
Sbjct: 781  DNNMLQQSIPLAYTPRHFIKHPEEPLFYVIEADNNVLSP----ATRARLLE--------- 827

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
               D    G D     P   E +GYP+  +  W SCI+++DP  A      +EL++NEAA
Sbjct: 828  ---DSKARGGDTTVLPP---EDFGYPRG-TGHWASCIQIIDPLDAKAVVGAVELEENEAA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             SI  V F  ++  T L VGTAK +   P  +   GYIHIYRF E+GK LE +HKT+VE 
Sbjct: 881  VSIAAVPFTSQDDETFLVVGTAKDMTVNPPSS-AGGYIHIYRFQEDGKELEFIHKTKVEE 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             PLAL  FQGRLLAG+G VLR+YDLG K+LLRKC+  + P  IV + T   RI V D++E
Sbjct: 940  PPLALLGFQGRLLAGVGSVLRIYDLGMKQLLRKCQAAVAPKAIVGLQTQGSRIVVSDVRE 999

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +  Y+  +N L  F DDS+ RW TAA  +D++T AG DKFGN++ VR P+  S+E +
Sbjct: 1000 SVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDKFGNLWLVRCPKKASEEAD 1059

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            E+ +G  +  ++G L G PN++E ++     D+ TSL K  LV GG + +++    G++G
Sbjct: 1060 EEGSGAHLIHDRGYLQGTPNRLELMIHVFTQDIPTSLHKTQLVAGGRDILVWTGFQGTIG 1119

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
             ++ F SR+DVDFF  LEM +  + PPL GRDH+ YRS Y PVK VIDGDLCEQ+  LS 
Sbjct: 1120 ILVPFVSREDVDFFQSLEMQLASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEQYFLLSN 1179

Query: 1185 DLQRKIADELDRTPGEILKKL 1205
            D +  IA ELDR+  EI +K+
Sbjct: 1180 DTKMMIAAELDRSVREIERKI 1200


>gi|71004436|ref|XP_756884.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
 gi|74704394|sp|Q4PGM6.1|RSE1_USTMA RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|46095609|gb|EAK80842.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
          Length = 1221

 Score = 1211 bits (3132), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1235 (49%), Positives = 831/1235 (67%), Gaps = 49/1235 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPEN-SGRIETLVSTEIFG 59
            MYLY+LTLQ    + A + G FSGT+  EI+VA+G  LELLRP+  +G+++T++S + FG
Sbjct: 4    MYLYNLTLQASGSVNATVVGQFSGTRQQEIIVAKGSRLELLRPDTQTGKVDTVLSHDAFG 63

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRLTG  KDY++VGSDSGRIVILEY P  N  +K+HQETFG+SG RRIVPGQY
Sbjct: 64   VIRSLAAFRLTGGSKDYVIVGSDSGRIVILEYQPKTNSLEKVHQETFGRSGSRRIVPGQY 123

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA MIGA EK  LVY+LNRD  A LTISSPLEAH+   I++ I G+D GF+NP
Sbjct: 124  LATDPKGRATMIGAMEKAMLVYILNRDAQANLTISSPLEAHRPSAIIHHIVGVDVGFENP 183

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DYS++D D +G+A  EA K LT+YELDLGLNHV RKWSEPVD  +N+LV VPG
Sbjct: 184  LFACLEVDYSDSDHDPSGRAFEEAAKTLTYYELDLGLNHVVRKWSEPVDPRSNLLVQVPG 243

Query: 240  G-------GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD----LPAERGVLIVSAAT 288
            G        DGPSGVLVC+E+++ YK+Q  P+ R  IP+R +    L   RG LIV++  
Sbjct: 244  GYNQNLEKWDGPSGVLVCSEDYITYKHQDQPEHRVPIPKRLNPVEKLSERRGTLIVASVL 303

Query: 289  HRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
            H+ K  FFFL+QTE GD+FK+T+EH ++ +  LKIKYFDT+PV + + +L+SG+LF ASE
Sbjct: 304  HKMKNAFFFLVQTEDGDLFKITMEHQDDEIRSLKIKYFDTVPVASGLVILRSGFLFVASE 363

Query: 349  FGNHALYQFQAIGADPDVEASSSTLMETEEGF-----QPVFFQPRGLKNLVRIEQVESLM 403
            +G   LY FQ +G D D+    ST  + E G      Q   F PR L NLV+++++ SL 
Sbjct: 364  YGAQLLYSFQKLGDDDDLPEYISTDYD-ENGAGRRRPQLPTFTPRPLDNLVQVDEMPSLD 422

Query: 404  PIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            PI+D +  N    ++PQIF  CGRG RSS ++LR GL V E   S LPGVPSAVWT K  
Sbjct: 423  PILDAKPLNPLAADSPQIFAACGRGARSSFKMLRHGLEVQEAVSSDLPGVPSAVWTTKIT 482

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
              DE+D+YI++SF N TLVLSIGET+EEVSDSGFL ++ +LAV  +G D+L+QVHP GIR
Sbjct: 483  QQDEYDSYIILSFVNGTLVLSIGETIEEVSDSGFLTSSSTLAVQQLGQDALLQVHPHGIR 542

Query: 524  HIREDGRINEWRTPG-----KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EK 577
            H+  D +INEW TP      + TIV   +N  QVV+ALS  EL+YFE+DM GQL E  E+
Sbjct: 543  HVLVDKQINEWATPSLPNGRQTTIVATCTNERQVVVALSSNELVYFELDMDGQLNEYQER 602

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
              M   V  + +   PEGR+R+ +LAVG  D+T+RI+SL+P+  +  +S+Q++++P  S+
Sbjct: 603  KAMGAGVLTMSMPDCPEGRQRTPYLAVGCDDSTVRIISLEPNSTLASISIQALTAPASSI 662

Query: 638  LFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
               E+   +      +H A+ F+N GLQNGVL RT++D VTGQL+D+R+RFLG +  +L 
Sbjct: 663  CMAEM---LDATIDRNH-ATTFVNIGLQNGVLLRTILDAVTGQLTDTRTRFLGSKAVRLI 718

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
               V G+AA++ LS+R WL Y ++ R    PL ++ L++A SFS++ C EG++ + G+ L
Sbjct: 719  RTKVHGQAAVMALSTRTWLSYTYQDRLQFVPLIFDVLDHAWSFSAELCPEGLIGIVGSTL 778

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKK-LMVIIETDQGALTAEEREAAKKECFE 816
            R+FTI  L     + ++ L YTPR+    P ++ L  ++E +   L+      A++   E
Sbjct: 779  RIFTIPSLASKLKQDSVALSYTPRKIANHPNEQGLFYVVEAEHRTLSP----GAQRRRTE 834

Query: 817  AAG--MGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
              G  +  +  G +D             L+  ++G  +AE+  W SCIR +D   A TT 
Sbjct: 835  MLGKELKPHQRGVLD-------------LNPAEFGAIRAEAGNWASCIRAVDGVQAQTTH 881

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
             LE+ DNEAAFSI  V F   E   +L VG+A  +   P R+    Y+  YR ++ G+ L
Sbjct: 882  RLEMDDNEAAFSIAVVPFASAEKEVMLVVGSAVDVVLSP-RSCKKAYLTTYRLLDNGREL 940

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
            ELLHKT+V+ IPL L  FQGRLLAGIG  LR+YDLGKK+LLRKCEN+ FP  +VS++   
Sbjct: 941  ELLHKTEVDDIPLVLRAFQGRLLAGIGKALRIYDLGKKKLLRKCENRSFPTAVVSLDAQG 1000

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
             RI VGD+QES  F  Y+  EN+L  FADD +P+++T    +D+DT+A ADKFGNIY +R
Sbjct: 1001 SRIVVGDMQESIIFASYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADKFGNIYVLR 1060

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESV 1114
            L  + S  ++EDPTG  I  E+  L GA +K   +  F VGD++TSL + ++V GG E +
Sbjct: 1061 LDGNTSRSVDEDPTGMTIVHEKPVLMGAAHKASLVAHFFVGDIITSLHRTAMVAGGREVL 1120

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGD 1174
            +Y  + GS+GA++ F S++DVD  S LE H+RQE+  + GRDH+AYRS+Y PVK VIDGD
Sbjct: 1121 LYTGLSGSIGALVPFVSKEDVDTLSTLESHLRQENNSIVGRDHLAYRSSYAPVKSVIDGD 1180

Query: 1175 LCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            LCE F  LS   Q  IA ELDR PGEI KKL ++R
Sbjct: 1181 LCETFGLLSPAKQNAIAGELDRKPGEINKKLAQLR 1215


>gi|258570355|ref|XP_002543981.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
 gi|237904251|gb|EEP78652.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
          Length = 1209

 Score = 1209 bits (3128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1229 (49%), Positives = 824/1229 (67%), Gaps = 45/1229 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G F+G K  +IV+A G  L +  P+ + G+I  L S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAIIGQFAGIKEQQIVIASGSRLSIHEPDSHQGKIRALYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY PS+N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIVEYVPSQNRFNRIHLETFGKSGIRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  TIV+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTIVFALTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IF A+E++Y+E+DQD TG A  E++K L +YELDLGLNHV RKW EPVD  A ML  VPG
Sbjct: 187  IFGALEVEYTESDQDPTGSAYEESEKLLVYYELDLGLNHVVRKWVEPVDRTAMMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE---RGVLIVSAATHRQKTLFF 296
            G DGPSGVLVCAE  + Y++      R  IPRR+  P E   R   I +   H+ +  FF
Sbjct: 247  GADGPSGVLVCAEGNITYRHSNQDVFRVPIPRRSG-PTENPDRKRYITAGVVHKMRRAFF 305

Query: 297  FLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
             LLQTE GD+FKVT+   E DN      V  LK+KYFDT+P+ +S+C+LK+G+LF ASE 
Sbjct: 306  CLLQTEDGDLFKVTIDMVEDDNGQPTGEVRRLKLKYFDTVPIASSLCILKNGFLFVASEN 365

Query: 350  GNHALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
            GNH  YQF+ +G D +    +S    ++  E   PV+F+PR  +NL  +E + S+ P+M 
Sbjct: 366  GNHHFYQFEKLGDDDEETEFTSDDFSSDPLEPLAPVYFRPRPAENLNLVESINSVNPLMS 425

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
             ++ANL E++APQ++TLCG G RS+ R L+ GL VSE+  S+LP VPSAVWT K   ND+
Sbjct: 426  CKVANLTEDDAPQLYTLCGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQ 485

Query: 468  FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
            +DAYI++SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  
Sbjct: 486  YDAYIILSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 545

Query: 528  DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVAC 586
            D R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V C
Sbjct: 546  DRRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTC 605

Query: 587  LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
            L +  +  GR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S 
Sbjct: 606  LSLGEILPGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDST 665

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
             G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+P KLFSV V  + A
Sbjct: 666  SGG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQRA 719

Query: 707  MLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
            +L LSSRPWLGY  +    F+LTPL Y  LE++ +FSS+QCVEG+V + G  LR+F+IE+
Sbjct: 720  VLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEK 779

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
            L     +  +PL YTPR FV  P+  L  +I  D   L+     A K +  E +      
Sbjct: 780  LDNNLLQETIPLAYTPRHFVRHPEHPLFYVIGADNNILSP----ATKAKLLEDS------ 829

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDNEA 883
                 +  NG+       L  E +GY +  +  W SCI+V+DP ++ T    +EL++NEA
Sbjct: 830  -----KAVNGEASE----LPPEDFGYSRG-TGHWASCIQVVDPINSKTVLSRIELEENEA 879

Query: 884  AFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE 943
            A S+  V F  ++  T L VGT K +   P  +   GYIHIYRF E+GK LE +HKT+VE
Sbjct: 880  AVSVAAVPFSSQDDETFLVVGTGKDMVVNPPSS-SCGYIHIYRFQEDGKELEFIHKTKVE 938

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
              P AL  FQGRLLAGIG  LR+YDLG K+LLRKC+ ++ P  IV + T   RI V D+Q
Sbjct: 939  SPPQALLAFQGRLLAGIGTNLRIYDLGMKQLLRKCQAEVVPRMIVGLQTQGSRIIVSDVQ 998

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            ES  +  Y+  EN+L  FADD + RW T    +D++T+AG DKFGN++ +R PQ  S+E 
Sbjct: 999  ESVTYVVYKYQENRLIPFADDIIARWTTCTTMVDYETVAGGDKFGNLWLLRCPQKASEEA 1058

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL 1123
            +ED +G  +  E+  L GAPN++  ++ F+  D+ TS+QK  LV GG + +++  + G++
Sbjct: 1059 DEDGSGAHLIHERQYLQGAPNRLSLMIHFYPQDIPTSIQKTQLVAGGRDILVWTGLQGTI 1118

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
            G ++ F SR+DVDFF  LEM +  + PP+ GRDH+ YRS Y P K  IDGDLCE + TL 
Sbjct: 1119 GMLIPFVSREDVDFFQSLEMQLTSQTPPIAGRDHLIYRSYYAPAKGTIDGDLCETYFTLP 1178

Query: 1184 LDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             D +  IA ELDR+  EI +K+ ++R K+
Sbjct: 1179 NDKKLMIAGELDRSVREIERKISDMRTKV 1207


>gi|189044515|sp|Q7RYR4.2|RSE1_NEUCR RecName: Full=Pre-mRNA-splicing factor rse-1
          Length = 1209

 Score = 1206 bits (3119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1232 (50%), Positives = 825/1232 (66%), Gaps = 53/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLT+Q PT +  A+ G FSGTK  +I+ A G  L LL+P+   G++ TL+S +IFG
Sbjct: 7    MFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R++A FRL GS KDYI++ +DSGRI I+EY P  N F +IH ETFGKSG RR++PGQY
Sbjct: 67   IVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I A EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LAADPKGRACLISALEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+ELDY++ADQD TGQA  E +  L +YELDLGLNHV RKWS+ VD  +++L  VPG
Sbjct: 187  VFAALELDYTDADQDPTGQAREEVETQLVYYELDLGLNHVVRKWSDTVDRTSSLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKT---L 294
            G DGPSGVLVC E  V Y++      R  IPRR  A    +R  +IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRSGATEDPQRKRVIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FKVT++       +    V  LKIKYFDTIPV  S+C+LKSG+LFAAS
Sbjct: 307  FFFLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTIPVATSLCILKSGFLFAAS 366

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D +    SS    T+    + PV+F PR L+NLV +E ++S+ P 
Sbjct: 367  EFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESIDSMNPQ 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+++CG G RS+ R+L+ GL VSE+  S+LPG PSAVWT K    
Sbjct: 427  VDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTPSAVWTTKLTKY 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D++DAYIV+SF N TLVLSIGETVEEVSDSGFL T P+LAV  +G+D L+QVHP GIRHI
Sbjct: 487  DQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
             + GR+NEW  P  R+IV   +N  QVVIALS GE++YFE+D  G L E  EK EMSG V
Sbjct: 547  VQ-GRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYDEKKEMSGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEG KRS FLAVG  D T+RILSLDPD  +++ S+Q++++ P +L  + ++ 
Sbjct: 606  TSLSVGQVPEGLKRSSFLAVGCDDCTVRILSLDPDSTLEMKSIQALTAAPSALSIMSMED 665

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S GG       ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P +LF V V  +
Sbjct: 666  SFGG-------STLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTRLFQVSVQDQ 718

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   + +G F++TPLSY  LEY  +FSS+QC+EG+V +  N LR+F+
Sbjct: 719  PCVLALSSRPWLGYTDPLTKG-FMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRIFS 777

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+LG+   + ++PL YTP+  V  P++     IE+D   L  E R              
Sbjct: 778  IEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKL----------- 826

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
                  ++Q  NGD       L  E +GYP+A+  +W SCI ++DP S     L  ++L 
Sbjct: 827  ------LEQQSNGDATV----LPPEDFGYPRAKG-RWASCISIIDPISEEPRVLQRIDLD 875

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V F  +E  + L VGT K +   P R    GYIH+YRF E+G+ LE +HK
Sbjct: 876  NNEAAVSAAIVPFASQEGESFLVVGTGKDMVLDP-RQFTEGYIHVYRFHEDGRDLEFIHK 934

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  PLAL  FQGRLLAG+G  LR+YDLG K+LLRK +  + P  IVS+ +  +RI V
Sbjct: 935  TRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIV 994

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q+   +  Y+ + N+L  FADD++ RW T    +D++++AG DKFGNIY VR P+ V
Sbjct: 995  GDLQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERV 1054

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S E +E  +   +   +  L+G PN++   V F+  D+ TS+ K SLV GG + +++  +
Sbjct: 1055 SQETDEPGSEIHLMHARNYLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGL 1114

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G++G  + F SR+DVDFF +LE HMR E PPL GRDH+ YR  Y PVK VIDGDLCE+F
Sbjct: 1115 QGTVGVFIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGVIDGDLCERF 1174

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1175 SLLPNDKKQMIAGELDRSVREIERKISDIRTR 1206


>gi|350290373|gb|EGZ71587.1| Pre-mRNA-splicing factor rse-1 [Neurospora tetrasperma FGSC 2509]
          Length = 1209

 Score = 1205 bits (3117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1232 (50%), Positives = 825/1232 (66%), Gaps = 53/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLT+Q PT +  A+ G FSGTK  +I+ A G  L LL+P+   G++ TL+S +IFG
Sbjct: 7    MFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R++A FRL GS KDYI++ +DSGRI I+EY P  N F +IH ETFGKSG RR++PGQY
Sbjct: 67   IVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I A EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LAADPKGRACLISALEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+ELDY++ADQD TGQA  E +  L +YELDLGLNHV RKWS+ VD  +++L  VPG
Sbjct: 187  VFAALELDYTDADQDPTGQAREEVETQLVYYELDLGLNHVVRKWSDTVDRTSSLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKT---L 294
            G DGPSGVLVC E  V Y++      R  IPRR  A    +R  +IV+   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRSGATEDPQRKRVIVAGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FKVT++       +    V  LKIKYFDTIPV  S+C+LKSG+LFAAS
Sbjct: 307  FFFLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTIPVATSLCILKSGFLFAAS 366

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D +    SS    T+    + PV+F PR L+NLV +E ++S+ P 
Sbjct: 367  EFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESIDSMNPQ 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+++CG G RS+ R+L+ GL VSE+  S+LPG PSAVWT K    
Sbjct: 427  VDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTPSAVWTTKLTKY 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D++DAYIV+SF N TLVLSIGETVEEVSDSGFL T P+LAV  +G+D L+QVHP GIRHI
Sbjct: 487  DQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
             + GR+NEW  P  R+IV   +N  QVVIALS GE++YFE+D  G L E  EK EMSG V
Sbjct: 547  VQ-GRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYDEKKEMSGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEG KRS FLAVG  D T+RILSLDPD  +++ S+Q++++ P +L  + ++ 
Sbjct: 606  TSLSVGQVPEGLKRSSFLAVGCDDCTVRILSLDPDSTLEMKSIQALTAAPSALSIMSMED 665

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S GG       ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P KLF V V  +
Sbjct: 666  SFGG-------STLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQDQ 718

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   + +G F++TPLSY  LEY  +FSS+QC+EG+V +  N LR+F+
Sbjct: 719  PCVLALSSRPWLGYTDPLTKG-FMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRIFS 777

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+LG+   + ++PL YTP+  V  P++     IE+D   L  E R              
Sbjct: 778  IEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKL----------- 826

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
                  ++Q  NGD       L  E +GYP+A+  +W SCI ++DP S     L  ++L 
Sbjct: 827  ------LEQQSNGDATV----LPPEDFGYPRAKG-RWASCISIIDPISEEPRVLQRIDLD 875

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V F  +E  + L VGT K +   P R    GYIH+YRF E+G+ LE +HK
Sbjct: 876  NNEAAVSAAIVPFASQEGESFLVVGTGKDMVLDP-RQFTEGYIHVYRFHEDGRDLEFIHK 934

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  PLAL  FQGRLLAG+G  LR+YDLG K+LLRK +  + P  IVS+ +  +RI V
Sbjct: 935  TRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIV 994

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q+   +  Y+ + N+L  FADD++ RW T    +D++++AG DKFGNIY VR P+ V
Sbjct: 995  GDLQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERV 1054

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S E +E  +   +   +  L+G PN++   V F+  D+ TS+ K SLV GG + +++  +
Sbjct: 1055 SQETDEPGSEIHLMHARNYLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGL 1114

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G++G  + F SR+DVDFF +LE HMR E PPL GRDH+ YR  Y PVK VIDGDLCE+F
Sbjct: 1115 QGTVGVFIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGVIDGDLCERF 1174

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1175 SLLPNDKKQMIAGELDRSVREIERKISDIRTR 1206


>gi|367027320|ref|XP_003662944.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
            42464]
 gi|347010213|gb|AEO57699.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
            42464]
          Length = 1211

 Score = 1205 bits (3117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1231 (49%), Positives = 831/1231 (67%), Gaps = 49/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLT+Q PT I  A+ G FSGT+  +I++A G  L LL+P+   G++ TL+S ++FG
Sbjct: 7    MFLYSLTIQPPTTITQALLGQFSGTREQQIIIASGSRLSLLQPDPRQGKVNTLLSHDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR++A FRL GS KDYI++ +DSGRI I+EY P  N F +IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRAIASFRLAGSHKDYIILATDSGRIAIIEYQPKTNRFSRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR+  A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LAADPKGRACLIASIEKNKLVYVLNRNAQAELTISSPLEAHKPGVLVLSLVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+EADQD TG+AA E +  L +YELDLGLNHV RKWS+ VD  +++L  VPG
Sbjct: 187  VFAALEIDYTEADQDPTGEAAKETEAQLVYYELDLGLNHVVRKWSDVVDPTSSLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKT---L 294
            G DGPSGVLVC E  + Y++      R  IPRR  A    +R   IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPQRKRTIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFL+QTE GD+ KVTL+   DN+      V  LKIKYFDTIP+  S+C+LKSG+LFAAS
Sbjct: 307  FFFLVQTEDGDLMKVTLDMVEDNDGNPTGEVRRLKIKYFDTIPIAKSLCILKSGFLFAAS 366

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D D +  +S    T+    + PV+F+PR L+NLV +E ++S+ P+
Sbjct: 367  EFGNHHFYQFEKLGDDDDEQEFTSDDFPTDPRASYNPVYFRPRPLENLVLVESIDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+ +CG   RS+ R+L+ GL VSE+  S+LPG P+AVWT K    
Sbjct: 427  VDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIVASELPGTPAAVWTTKLTKY 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            DE+D YIV+SF NATLVLSIGETVEEV++SGFL + P+LAV  +G++ L+QVHP GIRHI
Sbjct: 487  DEYDGYIVLSFTNATLVLSIGETVEEVTESGFLTSVPTLAVQQMGEEGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
             + GR+NEW  P  R+IV   +N  QVVIALS GE++YFE+D  G L E  EK EMSG V
Sbjct: 547  VQ-GRVNEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADGSLAEYDEKKEMSGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L I  VPEG +RS FLAVG  D T+RILSLDP+  +++ S+Q+++S P SL  + ++ 
Sbjct: 606  TSLSIGKVPEGLRRSSFLAVGCDDCTVRILSLDPESTLEMKSIQALTSAPSSLSIMSMED 665

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S GG        +L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P KLF V V  +
Sbjct: 666  STGG-------MTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQNQ 718

Query: 705  AAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            A +L LSSRPWLGY       F++TPL+Y  LEY  +F+S+QC+EG+V +  N LR+FTI
Sbjct: 719  ACVLALSSRPWLGYTDPITKNFVMTPLNYSELEYGWNFNSEQCLEGMVGIHANFLRIFTI 778

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            ++LGET  + ++PL YTP+R V  P++     IE+D   +  E R         A  + +
Sbjct: 779  DKLGETMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTIPPELR---------AQLLAQ 829

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQD 880
            +G  N D             L  E +GYP+A + +W SCI ++DP       L  ++L+ 
Sbjct: 830  SGAVNGDATV----------LPPEDFGYPRA-TGRWASCISIVDPLGDEPKVLQRIDLEG 878

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S   V F  +E  + L VGT K +   P R    GYIH+YRF E+G+ LE +HKT
Sbjct: 879  NEAAVSAAVVPFASQEGESFLVVGTGKDMVLNP-RKFTEGYIHVYRFHEDGRELEFIHKT 937

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +VE  PLAL  FQGRLLAGIG +LR+YDLG ++LLRK + ++ P  IV++ T   RI VG
Sbjct: 938  KVEEPPLALIPFQGRLLAGIGKMLRVYDLGLRQLLRKAQGEVAPQLIVTLQTQGSRIIVG 997

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+Q+   +  Y+ + N+L +FADD++ RW T    +D++++AG DKFGN++ +R P+  S
Sbjct: 998  DVQQGVTYVVYKPESNKLLVFADDTINRWTTCTTMVDYESVAGGDKFGNVWILRCPERAS 1057

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
             E +E  +  ++   +  L+GAPN+++ +V F+  D+ TS+ K +LV GG + +++  + 
Sbjct: 1058 QESDEPGSEIQLLHARKYLHGAPNRLDLMVHFYTQDLPTSIVKTNLVVGGQDVLVWSGIQ 1117

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G ++ F SR+DVDFF  LE HMR E PPL GRDH+ YR  Y PVK VIDGDLCE+F 
Sbjct: 1118 GTVGVLIPFVSREDVDFFQSLESHMRAEDPPLAGRDHLIYRGYYVPVKGVIDGDLCERFS 1177

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1178 LLPNDKKQMIAGELDRSVREIERKISDIRTR 1208


>gi|406868052|gb|EKD21089.1| pre-mRNA-splicing factor rse1 [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 1236

 Score = 1204 bits (3116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1225 (49%), Positives = 828/1225 (67%), Gaps = 48/1225 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT    AI G F+G K  +I+ A G  L L RP+ S G+I T +S ++FG
Sbjct: 7    MFMYSLTVQPPTATTQAILGQFTGNKEQQIITASGSRLTLHRPDPSQGKILTALSHDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI++ SDSGRI I+E+ P++N F+++H ETFGKSG RR++PGQY
Sbjct: 67   IIRALASFRLAGSNKDYIIITSDSGRITIVEFLPAQNKFNRLHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK  T+V+++C +D G+ NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMCALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY ++DQD TGQA  E +K+L +YELDLGLNHV RKWS+PVD  A++L  VPG
Sbjct: 187  VFAALEVDYGDSDQDPTGQAYDEIEKSLVYYELDLGLNHVVRKWSDPVDRTASVLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC ++ + Y++      R  IPRR  A     R  +IV    H+ K     
Sbjct: 247  GTDGPSGVLVCGDDNITYRHSNQEAFRVAIPRRRGATEDPNRKRVIVGGVMHKLKGAAGA 306

Query: 295  FFFLLQTEYGDIFKVTLEH-DNE------HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FKVT+E  +N+       V  LKIKYFDT+P+  S+C+LKSG+LF AS
Sbjct: 307  FFFLLQTDDGDLFKVTIEMVENDEGAPTGEVKRLKIKYFDTVPIATSLCILKSGFLFVAS 366

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D +     S    T+  E + PV+F PR  +NL  +E ++S+ P+
Sbjct: 367  EFGNHQFYQFEKLGDDDEETEFISDNFPTDPLEPYTPVYFHPRPAENLSLVESIDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            MD ++ANL EE+APQI+++CG G RS+ R LR GL VSE+  S+LPGVPSAVWT K   N
Sbjct: 427  MDCKVANLTEEDAPQIYSICGTGARSTFRTLRHGLEVSEIVESELPGVPSAVWTTKLTRN 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D +DAYI++SF N TLVLSIGETVEEV+D+GFL + P+LAV  +GDD L+QVHP GIRHI
Sbjct: 487  DTYDAYIILSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGDDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R D R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V
Sbjct: 547  RADRRVNEWAAPQHRSIVAAATNARQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGTV 606

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS+FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  
Sbjct: 607  TCLSLGEVPEGRVRSQFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMSD 666

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S  G       ++L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P +LF V V G+
Sbjct: 667  SSSGG------STLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPARLFRVSVQGQ 720

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
            AA+L LSSRPWLGY   + +G F+LTPL+Y  LE+  +FSS+QC EG+V + G  LR+F+
Sbjct: 721  AAVLALSSRPWLGYSDPVTKG-FMLTPLNYPGLEWGWNFSSEQCTEGMVGIQGQNLRIFS 779

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+L +   +  + L YTPRRF+  P+  L   IE+D   L+     A K +  E   + 
Sbjct: 780  IEKLTDNLLQDTISLTYTPRRFLRHPEHPLFYTIESDNNILSP----ATKAKLLEDPSI- 834

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL-LELQD 880
             NG+  +              L  E++GYP+ + + W SCI V+DP +       ++L D
Sbjct: 835  VNGDAAV--------------LPAEEFGYPRGK-NHWASCISVVDPVTEKRVLQKIDLDD 879

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S+  V+F  ++    L +GT K +   P R+  AG+IH+YRF + GK +E +HKT
Sbjct: 880  NEAAVSMAAVSFSSQDDEVFLVIGTGKDMIVSP-RSSTAGFIHVYRFHDNGKEIEFIHKT 938

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +VE  P+AL  FQGRLL GIG  LR+YDLG ++LLRK + ++ PN IV + T   RI V 
Sbjct: 939  KVEEPPMALLGFQGRLLVGIGKDLRIYDLGMRQLLRKAQAEVAPNLIVGLQTQGSRIVVS 998

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+QES     Y+  EN+L  F DD++ RW +    +D++T+AG DKFGN++ +R P   S
Sbjct: 999  DVQESIIMIVYKFQENKLIPFVDDTISRWTSCTTMVDYETVAGGDKFGNLWLLRCPTKAS 1058

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            +E +E+ +   +  E+  L G+P+++  +  F   D+  S+QK +LV GG + +++  + 
Sbjct: 1059 EEADEEGSASHLVHERSYLQGSPHRLTLMAHFFTQDIPMSIQKTNLVAGGRDCILWSGIQ 1118

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G+LG ++ F SR+DVDFF  LE H+R E  PL GRDH+ YRS Y PVK VIDGDLCE++ 
Sbjct: 1119 GTLGILIPFVSREDVDFFQTLEQHLRSEDAPLAGRDHLIYRSYYVPVKGVIDGDLCERYT 1178

Query: 1181 TLSLDLQRKIADELDRTPGEILKKL 1205
             L  D ++ IA ELDR+  EI +K+
Sbjct: 1179 LLPTDKKQMIAGELDRSVREIERKI 1203


>gi|388855100|emb|CCF51231.1| probable splicing factor 3B subunit 3 [Ustilago hordei]
          Length = 1221

 Score = 1202 bits (3111), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1237 (48%), Positives = 833/1237 (67%), Gaps = 53/1237 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            ++LY+LTLQ    + A + G FSGT+  EIVVA+G  LELLRP+ S G++ET++S + FG
Sbjct: 4    LHLYNLTLQPSGSVNATVVGQFSGTRQQEIVVAKGSRLELLRPDTSTGKVETVLSQDAFG 63

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RSLA FRLTG  KDY++VGSDSGRIVILE+ P  N FDK+HQETFG+SG RRIVPGQY
Sbjct: 64   VVRSLAAFRLTGGSKDYLIVGSDSGRIVILEFQPQTNSFDKVHQETFGRSGSRRIVPGQY 123

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA MIGA EK KLVY+LNRD  A LTISSPLEAH+ + I++ I G+D GF+NP
Sbjct: 124  LATDPKGRATMIGAMEKAKLVYILNRDAQANLTISSPLEAHRPNGIIHHIVGVDVGFENP 183

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DYSE+D D +G+A  EA+K LT+YELDLGLNHV RKWSEPVD  +N+L+ VPG
Sbjct: 184  LFACLEIDYSESDHDPSGRAYDEAEKTLTYYELDLGLNHVVRKWSEPVDPRSNLLLQVPG 243

Query: 240  G-------GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD----LPAERGVLIVSAAT 288
            G        DGPSGVLVC+E+++ YK+Q  P+ R  IPRR +    +   RG L+V++  
Sbjct: 244  GYNHNLEKWDGPSGVLVCSEDYITYKHQDQPEHRVPIPRRLNPIEKMSERRGTLVVASVL 303

Query: 289  HRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
            H+ K  FFFL+QTE GD+FK+T+EH ++ +  LKIKYFDT+PV + + +L+SG+LF ASE
Sbjct: 304  HKMKNAFFFLVQTEDGDLFKITMEHQDDEIRSLKIKYFDTVPVASGLAILRSGFLFVASE 363

Query: 349  FGNHALYQFQAIGADPDVEASSSTLMETEEGF-----QPVFFQPRGLKNLVRIEQVESLM 403
            FG   LY FQ +G D D+    ST  + E G      Q   F PR L NLV+++++ SL 
Sbjct: 364  FGPQLLYSFQKLGDDDDLPEYISTDYD-ENGAGRKRPQLPTFTPRSLDNLVQVDEMPSLD 422

Query: 404  PIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            PI+D +  N    ++PQIF  CGRG RSS ++LR GL   E   S LPGVPSAVWT K  
Sbjct: 423  PILDAKPLNPLASDSPQIFVACGRGARSSFKMLRHGLEAQEAVSSDLPGVPSAVWTTKIT 482

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
              DE+D+YI++SF N TLVLSIGET+EEV DSGFL ++P+LAV  +G+D+L+QVHP GIR
Sbjct: 483  RQDEYDSYIILSFLNGTLVLSIGETIEEVGDSGFLTSSPTLAVQQLGEDALLQVHPYGIR 542

Query: 524  HIREDGRINEWRTPG-----KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH 578
            HI  D ++NEW TP      + TIV + +N  QV +ALS  EL+YFE+DM GQL E +  
Sbjct: 543  HILVDKQVNEWATPSLPNGVQTTIVAICTNERQVAVALSSNELVYFELDMDGQLNEYQDR 602

Query: 579  EMSG-DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
            + +G  V  + +A  PEGR+R+ +LA G  D+T+RI+SL+P   +  +S+Q++++P  S+
Sbjct: 603  KATGATVLTMSMADCPEGRQRTPYLAAGCDDSTVRIISLEPASTLASISIQALTAPASSI 662

Query: 638  LFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
               E++ +    +     A+ F+N GL NGVL RTV+D +TGQL+D+R+RFLG +  +L 
Sbjct: 663  CVAEMKDATVDRN----QATTFVNIGLSNGVLLRTVLDAMTGQLTDTRTRFLGSKAVRLI 718

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
               V G++A++ LS+R WL + ++ R   TPL ++ L++A SFS++ C EG++ + G+ L
Sbjct: 719  RTKVHGQSAVMALSTRTWLSFTYQSRLQFTPLIFDALDHAWSFSAELCPEGLIGIVGSTL 778

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKK-LMVIIETDQGALT--AEER--EAAKK 812
            R+FTI  L     + ++ L YTPR+    P ++ L  ++E D+  L+  A+ R  EA +K
Sbjct: 779  RIFTIPSLASKLKQDSVALSYTPRKIAHHPDEQGLFYVVEADRRTLSPGAQRRRVEALEK 838

Query: 813  ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT 872
            E      +  +  G +D             L   ++G  + E+  W SC+RV+D   + T
Sbjct: 839  E------LKPHQRGVLD-------------LKPAEFGLIRGEAGNWASCVRVVDGPQSQT 879

Query: 873  TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK 932
            T  +EL DNEAAFS+  V F   E  + L VG+A  +   P R+    Y+  YR +  G+
Sbjct: 880  THKIELDDNEAAFSVAIVPFASAEKQSFLVVGSAVDVVLSP-RSFKKAYLTTYRLINGGR 938

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINT 992
             LE+ HKT+++ IPL L  FQGRLLAG+G  LR+YDLGKK+LLRKCENK FP  IVS++ 
Sbjct: 939  ELEVHHKTEIDDIPLVLRPFQGRLLAGVGKALRIYDLGKKKLLRKCENKSFPTAIVSLDA 998

Query: 993  YRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
               RI VGD+QES  F  Y+  EN+L  FADD +P+++T    +D+DT+A ADKFGN+Y 
Sbjct: 999  QGSRIVVGDMQESIVFTSYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADKFGNLYV 1058

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
            +R+  D S  ++EDPTG  I  E+  L GA +K   +  + VGD++TSL +  +VPGG E
Sbjct: 1059 LRIDADTSRSVDEDPTGMTIVHEKPVLMGAAHKATLLAHYFVGDIITSLNRTVMVPGGRE 1118

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
             ++Y  + G++GA++ F S++DVD  S L+  +RQE+  L GRDH+AYRS+Y PVK VID
Sbjct: 1119 VLMYTGISGTIGALVPFVSKEDVDTLSTLQTQLRQENNSLVGRDHLAYRSSYAPVKSVID 1178

Query: 1173 GDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            GDLCE F  L    Q  IA ELDR P EI KKL ++R
Sbjct: 1179 GDLCETFGLLQPAKQNAIAQELDRKPSEINKKLAQLR 1215


>gi|353236335|emb|CCA68332.1| probable splicing factor 3B subunit 3 [Piriformospora indica DSM
            11827]
          Length = 1243

 Score = 1202 bits (3109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1234 (49%), Positives = 825/1234 (66%), Gaps = 50/1234 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LY+LTL+  + I AA+ GNFSG +  EI+V+RG  L+LLRP+ + G++ T++  ++FG
Sbjct: 29   MHLYNLTLEHASSITAAVVGNFSGVRQQEILVSRGTRLQLLRPDPALGKLSTVLVYDVFG 88

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY +VGSDSGRIVILEY+P +N F+K++QET+GK+G RRIVPGQ 
Sbjct: 89   SIRSLAAFRLTGGTKDYAIVGSDSGRIVILEYDPKQNAFNKLYQETYGKTGARRIVPGQM 148

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGR++M+ A EK KLVYVLNRD AA LTISSPLEAHK   I++ I G+D GF+NP
Sbjct: 149  LATDPKGRSLMVSAMEKAKLVYVLNRDAAANLTISSPLEAHKPSAIIHHIVGVDVGFENP 208

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            ++AA+E+DYSEAD D +GQA  + +K LTFYELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 209  LYAALEVDYSEADNDPSGQAIRDTEKMLTFYELDLGLNHVVRKWSEPTDRRANLLVQVPG 268

Query: 240  GG-----------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE----RGVLIV 284
            G            DGPSGVLVC E+ VIY++   P +R  IPRR + P E    RG+LI+
Sbjct: 269  GQTTTGDPPITRIDGPSGVLVCCEDHVIYRHMDQPQLRVPIPRR-EHPLEDASSRGLLII 327

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
            SA  HR K  FFFLLQ+E GD++KVTLEH +E V  LKIKYFDT+    ++C+LKSG+LF
Sbjct: 328  SAVMHRMKGAFFFLLQSELGDLYKVTLEHQDEDVVALKIKYFDTVSPAVNLCILKSGHLF 387

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGF----QPV---FFQPRGLKNLVRIE 397
              +EFGNHA YQFQ +G D D E   S+      G     QP+   +F+P+ L+NLV ++
Sbjct: 388  VPAEFGNHAFYQFQKLG-DDDKEPEYSSADYPGNGMRTPSQPLPRAYFRPKPLENLVLLD 446

Query: 398  QVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAV 457
            ++ESL PI+  R+ NL   +    +T CG+G +S+ R L+ GL V E   S LP +P+AV
Sbjct: 447  ELESLDPILAARVQNL--PDTSLFYTACGKGAKSTFRTLKHGLEVEENGNSDLPSIPNAV 504

Query: 458  WTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQV 517
            WT+K    D++D+YIV+SF N TLVLS GE +EE+ +SGFL + P+LA   +G D+L+QV
Sbjct: 505  WTLKLAETDQYDSYIVLSFINGTLVLSFGEEIEEIPNSGFLSSEPTLAAQQLGSDALLQV 564

Query: 518  HPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-E 576
            HP GIRH+  D R+NEWR P    IV   +N+ QVV+ALS  EL+YFE+D  GQL E  E
Sbjct: 565  HPRGIRHVLSDKRVNEWRAPIGMAIVAATTNKRQVVVALSSAELVYFELDYEGQLNEFQE 624

Query: 577  KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPES 636
            +  M   V  L +  VPEG +R ++LAVG  D T+RI+SLDPD  ++++S+Q+V++PP S
Sbjct: 625  RKAMGSTVLALSVGEVPEGLQRFKYLAVGCEDQTVRIISLDPDSTLEMISLQAVTAPPSS 684

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            +   ++  S   +    H  + F+N GLQNGVL RTV+D   G+L+D+R+RFLG RP +L
Sbjct: 685  ISIADMFDSSIDK----HRPTTFVNIGLQNGVLLRTVLDPTNGKLADTRTRFLGNRPVRL 740

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                V G   +L LSSR WL Y ++G    TPL+Y+ L+ A S +++ C +G + +A N 
Sbjct: 741  VRTQVHGSPGVLALSSRSWLNYTYQGLVHFTPLAYDRLDGACSVNAELCPDGFIGIANNT 800

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFE 816
            LR+F + +LG    +  LPL YTPR+FV  P+     +IE+D  A++    E   +E  +
Sbjct: 801  LRIFQVPKLGSKLKQEILPLSYTPRKFVSHPQNSYFYLIESDHRAMS----ETMIEERVK 856

Query: 817  AAGM-GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL 875
            A  M GE  +  M ++         DP     YG+ KA    W SCIR++DP +  +   
Sbjct: 857  AIEMSGEKVDREMLEL---------DP---RIYGHFKAPEGVWASCIRIIDPVNLRSVAA 904

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
              L +NEAAFSI  V F  +    LL VGTA      P R+   GY+ +Y F E G  LE
Sbjct: 905  FSLDNNEAAFSIAVVPFAARNGELLLVVGTAVDTHLAP-RSCSTGYLRVYSFTEGGSGLE 963

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
            LLHKT ++ +P AL  FQGRL+AG+G  LRLYD+GKK+LLRK EN+ F   IV+++T   
Sbjct: 964  LLHKTDIDEVPTALMAFQGRLIAGVGKALRLYDIGKKKLLRKAENRQFATAIVTLSTQGS 1023

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            RI  GDI +S ++  Y+  EN+L IFADD+  RW+TA+  +D++T+  ADKFGN++  RL
Sbjct: 1024 RILAGDINQSIYYVAYKAAENRLLIFADDTSARWITASTMLDYNTVVAADKFGNVFVNRL 1083

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
             + VS ++++DPTG  I  E+  L GAP+K + +  FHVGDV+TS+Q+ +LV G  E V+
Sbjct: 1084 DEAVSKQVDDDPTGAGILHEKSVLMGAPHKTKMLTHFHVGDVITSIQRVALVAGAREVVV 1143

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDL 1175
            Y  + G++G ++   ++DDVDF S LE HMR E+  L GRDH+++R  Y PVK  +DGDL
Sbjct: 1144 YFGLHGTIGILVPLVTKDDVDFISTLEQHMRTENLSLVGRDHLSWRGYYTPVKATVDGDL 1203

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            CE F  L    Q  IA ELDRT G++LKKLE +R
Sbjct: 1204 CEYFAKLPTQKQLAIAGELDRTVGDVLKKLESLR 1237


>gi|323454388|gb|EGB10258.1| hypothetical protein AURANDRAFT_23619 [Aureococcus anophagefferens]
          Length = 1212

 Score = 1201 bits (3108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1237 (50%), Positives = 839/1237 (67%), Gaps = 49/1237 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVAR-GKVLELLRP-ENSGRIETLVSTEIF 58
            M+  S TLQ P G++AAI G FS  K  EIVVAR G VLELLRP E SG++ ++ +T  F
Sbjct: 1    MHFVSFTLQPPGGVVAAIYGQFSAAKAQEIVVARPGGVLELLRPDEASGKVVSVATTPTF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              IRSLA FRLTG  +DY+VVGSD+G + ++E++ + N F ++H E FGK+GCRR VPGQ
Sbjct: 61   SVIRSLAPFRLTGGSRDYVVVGSDAGAVAVVEFDAAANSFARVHCEVFGKTGCRRGVPGQ 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            Y+  DP+GRA+M+ A EKQKLVYV+NRD ++ LTI SPLEAHK+ T+ +    +D GFDN
Sbjct: 121  YVCCDPRGRALMVAAVEKQKLVYVMNRDASSNLTIGSPLEAHKAATVCFHAVALDVGFDN 180

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P FAA+EL+Y + D D++G+A  E +K LT+YELDLGLNHV+R+WSEPV   AN+LV VP
Sbjct: 181  PTFAALELEYGDCDADASGEAVDETEKMLTYYELDLGLNHVTRRWSEPVSRTANLLVAVP 240

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
            GG +GPSGVLVC EN+V YK++GH +VRA +PRR   PA RG+LI + ATHRQ+ LFFFL
Sbjct: 241  GGDEGPSGVLVCGENWVAYKHEGHAEVRAPLPRRLGYPANRGLLITATATHRQRELFFFL 300

Query: 299  LQTEYGDIFKVTLE-HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            LQ+E GD++KVTL       VS+++   FD I   A++C+ ++G L+AA+EFG+H L+QF
Sbjct: 301  LQSELGDLYKVTLAWAPGAGVSDVRASVFDCIFPCAALCITRTGLLYAAAEFGDHGLFQF 360

Query: 358  QAIGA-----------DP---DVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLM 403
            Q IG            DP   D  AS++T+        P F      KNL+ +++  S  
Sbjct: 361  QGIGDDDGAAAAAAVHDPELGDDAASAATV-------APTFVASDRPKNLLLLDEPASCR 413

Query: 404  PIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
             I D+   +L  EEAPQ++ LCG+G RSSLR+LR G+AVSEMAVS+LPG PSAVWTV+  
Sbjct: 414  AITDVYCGDLAGEEAPQVYALCGKGHRSSLRVLRHGVAVSEMAVSELPGRPSAVWTVRGR 473

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             ++ +D YIVVSF NATLVLSIGETVEEV+DSGFL T P+L V+L+ D++L+QVH  GIR
Sbjct: 474  HDEPYDKYIVVSFTNATLVLSIGETVEEVTDSGFLATAPTLDVALLADNALLQVHGEGIR 533

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGD 583
            H+R D RI+EW+TPG++ I K  +N  QV  AL+GGE+IYFE+D +G L E+   E+  +
Sbjct: 534  HVRGDLRISEWKTPGRKAIEKAAANERQVAAALAGGEVIYFELDASGALAELGTKELGVE 593

Query: 584  VACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQ 643
            VACLD+  VP GR R+ FLA+G +D ++R+LSL PD+ +  ++   + +  ES+ F E  
Sbjct: 594  VACLDVGVVPAGRARAPFLALGGWDGSLRLLSLAPDELLVQVATMQLGARAESVRFCET- 652

Query: 644  ASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG 703
                  DG      L + AGL NGVL R  VD  TGQL D+R+RFLG R  +LF V VGG
Sbjct: 653  -----PDG-----RLGVAAGLANGVLQRAAVDASTGQLGDARARFLGSRAVRLFRVDVGG 702

Query: 704  RAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIE 763
               +L LSSR WL Y H GR    PLSY+ LE+AA F S+QC EGVV++AG+ LR+F  +
Sbjct: 703  APGLLALSSRAWLCYAHAGRLETAPLSYDALEHAAGFKSEQCPEGVVAIAGSTLRIFVPD 762

Query: 764  RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT-AEEREAAKKECF------E 816
            +LGETFN++ALPLRYTPRR  + P    ++++E DQ A   AE R  A  +         
Sbjct: 763  KLGETFNQSALPLRYTPRRLAVLPGGGHLLVVEADQHAYNDAERRALAAAQSLAGAPAAG 822

Query: 817  AAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLL 876
              G G  G  +MD  +         P        P A+  KW SC+RV+DP +  T  LL
Sbjct: 823  GGGGGGGGGDDMDLGDGAGGGGDGAPRVAVCGPTPPADG-KWASCVRVVDPVAGRTLELL 881

Query: 877  ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLEL 936
            EL ++EAA S  TV+F  +     +AVGTA+ L F P+ +    Y+H+YR +E    L L
Sbjct: 882  ELGESEAALSCATVSFAGRGGEVFVAVGTARSLTFHPRAH-EGCYVHVYRLLE--SRLVL 938

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDR 996
            LH+T+V+ +PL L +F+GRLL  +G  LR+YDLGK++LLRK E  L P  I  +    DR
Sbjct: 939  LHRTEVDDVPLGLAEFRGRLLVAVGATLRMYDLGKRKLLRKTEAALAPTLITKVEVVGDR 998

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I+V D   S H  +Y RD N+L +FADD V R +TA   +D+DT+A ADKFGN+  +RL 
Sbjct: 999  IFVADAAMSVHLARYVRDRNRLAVFADDPVGRCVTAFAPLDYDTVAVADKFGNVAVLRLG 1058

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIY 1116
             + SD++++        W+ G+  GAPNK+ ++  +HVGDVVT+L+KA+LV GG E ++Y
Sbjct: 1059 PECSDDVDDAAG---DAWDNGRNGGAPNKLTQLAHYHVGDVVTALRKATLVAGGAEGIVY 1115

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLC 1176
             TV G +GA++  +SR+D DFF+HLEMHMRQE  P+ GRDH++YRS Y PVKDV DGDLC
Sbjct: 1116 ATVSGGVGALVPSASREDRDFFAHLEMHMRQELAPVTGRDHVSYRSYYLPVKDVADGDLC 1175

Query: 1177 EQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
             +F  L  D Q+++A++LDRTPGE+ KKLE+ RN+++
Sbjct: 1176 AEFARLPFDAQKRVAEDLDRTPGEVAKKLEDTRNRLL 1212


>gi|378730762|gb|EHY57221.1| pre-mRNA-splicing factor rse1 [Exophiala dermatitidis NIH/UT8656]
          Length = 1210

 Score = 1200 bits (3105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1230 (49%), Positives = 814/1230 (66%), Gaps = 46/1230 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++Y+LT+Q P+ I +A+ G F+GTK  +I+ A G  L + RP+ S G+I  L + + FG
Sbjct: 7    MFMYNLTIQPPSAITSAVLGQFAGTKEQQIITASGSKLTIHRPDPSQGKISPLFTQDCFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDY++VGSDSGRI ILEY   +N F+++H ETFGKSG RR++PGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYLIVGSDSGRITILEYVKDQNRFNRVHLETFGKSGIRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAHK  T+V+    +D G++NP
Sbjct: 127  LAVDPKGRACIIASVEKNKLVYVLNRNAQAELTISSPLEAHKPQTLVFDCVALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DY+E DQD TGQA  E +K L +YELDLGLNHV R+W+EPV   A  L  +PG
Sbjct: 187  IFAALEVDYTEVDQDPTGQALQEVEKLLVYYELDLGLNHVVRQWAEPVARDATKLFQIPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVCAE+ + Y++      R  IPRR  +    ER   IV+   H+ K  FF 
Sbjct: 247  GSDGPSGVLVCAEDNITYRHSNQEAFRVPIPRRRGVLENPERKRHIVAGVMHKMKGQFFL 306

Query: 298  LLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT+   E DN      V  LKIKYFDT+PV  S+ +LKSG+LF ASE G
Sbjct: 307  LLQTEDGDLFKVTIDMVEDDNGQLTGEVRALKIKYFDTVPVANSLHILKSGFLFVASESG 366

Query: 351  NHALYQFQAIGADPDVE--ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G D +     S     +    + P FF  R L NL  ++ V++  P++D 
Sbjct: 367  NHHFYQFEKLGDDDEETEFTSDDYPADPTAAYTPAFFHVRPLSNLNLVQSVDAANPLLDC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ANL +E+APQI+++CG G RSS + L+ GL+VSE+  S+LP  P AVWT K   +D++
Sbjct: 427  KVANLLDEDAPQIYSICGAGARSSFKTLKHGLSVSEIVESELPDKPEAVWTTKLTRDDQY 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF   TLVLSIGETVEEV+D+GFL T P+LAV  +G+D+L+QVHP GIRHIR D
Sbjct: 487  DAYIILSFRTGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDALVQVHPKGIRHIRAD 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
             R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ EM+G V CL
Sbjct: 547  KRVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDERREMTGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGDVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSTS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G        +++L+ GL +GV  RTV+D +TG+LSD+R+RFLGLRP KLF V V G+ A+
Sbjct: 667  GG------TTMYLHIGLYSGVYLRTVLDEITGELSDTRTRFLGLRPAKLFRVSVKGQNAV 720

Query: 708  LCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            + LSSRPWLGY       F+LTPL Y  L+Y  +F+S+QC EG+V + G  LR+F+IE L
Sbjct: 721  MALSSRPWLGYTDTQTNGFMLTPLDYVPLQYVWNFTSEQCPEGMVGIQGQNLRIFSIEDL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                 +  +PL YTPR+FV  P + L  +IE D   L    R+    E         NG+
Sbjct: 781  SRNLLQENIPLPYTPRKFVKHPDQPLFYVIEADNNVLAPATRQKLLNE-----STAVNGD 835

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL-LELQDNEAA 884
              +              L  E++GYPKA +  W SCI+V+DP +  +    LEL+DNE A
Sbjct: 836  AVI--------------LPPEEFGYPKA-TGHWASCIQVVDPVNTKSVVFTLELEDNECA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             SI T  F  ++    L VGTAK L   P R+  AG++H+YRF E+GK LE +HKT+VE 
Sbjct: 881  TSITTAPFASQDDEVFLIVGTAKDLVVSP-RSFSAGFLHVYRFHEDGKELEFIHKTKVEQ 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
             P AL  FQGRLLAG+GP LR+YDLG K++LRKC+    PN IV + T   RI V DIQE
Sbjct: 940  PPTALLAFQGRLLAGVGPDLRIYDLGMKQMLRKCQVTT-PNLIVGLQTQGSRIIVSDIQE 998

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S  +C Y+  EN+L  F DD + RW T    +D++T+AG DKFGN++ +R PQ VS+E +
Sbjct: 999  SVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGDKFGNLWMLRCPQKVSEEAD 1058

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            ED +G  +  E+G LNG PN++  ++ +  GD+ TS+QK +LV GG + V +    G+LG
Sbjct: 1059 EDNSGVHLLHERGYLNGTPNRLSLMIHYFPGDIPTSIQKTNLVAGGRDVVFWTGFQGTLG 1118

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQE--HPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL 1182
             ++ F SR+DVDFF  LEM +     +PPL GRDH+ YRS Y P K VIDGDLCE F  L
Sbjct: 1119 ILVPFVSREDVDFFQSLEMQLASSNGNPPLLGRDHLIYRSYYAPSKGVIDGDLCETFFLL 1178

Query: 1183 SLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
              D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 1179 PNDKKLMIAGELDRSVREIERKISDMRTRV 1208


>gi|47212603|emb|CAF93045.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1171

 Score = 1197 bits (3097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1187 (53%), Positives = 816/1187 (68%), Gaps = 117/1187 (9%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY++TLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1    MFLYNITLQRSTGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSL  FRLTG  KDYIV+GSDSGRIVILEY+PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61   IIRSLMAFRLTGGTKDYIVIGSDSGRIVILEYSPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRAVMIGA EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121  LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SE ++   N L+TVPG
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRA---DLPAERGVLIVSAATHRQKTLF 295
            G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241  GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL QTE GDIFKVTLE D E V+E+++KYFDTIPV  +MCVLK+G+LF ASEFGNH LY
Sbjct: 300  FFLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++ ESL PIM  +IA+L  
Sbjct: 360  QIAHLGDDDD-EPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDEQESLSPIMSCQIADLAN 417

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            E+ PQ++  CGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTV+++V DEFDAYI+VS
Sbjct: 418  EDTPQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVS 477

Query: 476  FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478  FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            TPGK+TIV+   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538  TPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
            G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+   V  +D    
Sbjct: 598  GEQRSRFLAVGLADNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM-GGVEKQDELGE 656

Query: 655  PAS---LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
             AS   L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L +S
Sbjct: 657  KASIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMS 716

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            SR WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  FN+
Sbjct: 717  SRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQ 776

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENGNGN 827
             A PL+YTPR+FV+ P+   +V+IE+D  A T    A+ ++   +E  EAAG  E     
Sbjct: 777  VAFPLQYTPRKFVIHPETNNLVLIESDHNAYTEATKAQRKQQMAEEMVEAAGEDERELA- 835

Query: 828  MDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
             +      +EN    L +  +G PKA + +W S +R+++P   +T   ++L+ NEAAFS+
Sbjct: 836  AEMAAAFLNEN----LPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSV 891

Query: 888  CTVNFHDKEHGTLLAVGTAKGLQFWPKR---------NIVAG-----YIH---------- 923
                F +      + VG A+ +   PK           +VAG     ++H          
Sbjct: 892  AVCRFPNTGDDWYVLVGVARDMILNPKSVTGGFIYTYRLVAGGEKLEFVHKTPVEDVPLA 951

Query: 924  --------------IYRFVEEGKSLELLHKT----------QVEGI-PLALCQF------ 952
                          + R  + GK  +LL K           Q EG   LA C        
Sbjct: 952  IAPFQGRVLVGVGKLLRIYDMGKK-KLLRKCENKPARRRRFQDEGTTSLAHCNHVGPLDG 1010

Query: 953  --------QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
                     G+L A  GP+         + +R+    + PN +  I+T   R+ V D+QE
Sbjct: 1011 PSSDPGPQLGQLTASGGPMTT-----SSQPIRQSRQHI-PNLVTGIHTTGQRVIVTDVQE 1064

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF------------ 1052
            S  + +YRR+ENQL IFADD+ PRW+T A  +D+DTMA ADKFGNI              
Sbjct: 1065 SLFWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVSTGGREGGPGP 1124

Query: 1053 -------------VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKM 1086
                         VRLP + SD+++EDPTG K  W++G LNGA  K+
Sbjct: 1125 PPALMPSVVLVPQVRLPPNTSDDVDEDPTGNKALWDRGLLNGASQKV 1171


>gi|367050506|ref|XP_003655632.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
 gi|347002896|gb|AEO69296.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
          Length = 1211

 Score = 1197 bits (3096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1231 (49%), Positives = 824/1231 (66%), Gaps = 49/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLT+Q PT I  A+ G FSGTK  +I+ A G  L LL+P+   G++ TL+S +IFG
Sbjct: 7    MFLYSLTIQPPTTITQALLGQFSGTKEQQIITASGSRLTLLQPDPRQGKVNTLMSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++ +DSGRI I+EY P +N F +IH ETFGKSG RR++PGQY
Sbjct: 67   IIRSLASFRLAGSHKDYIILATDSGRIAIVEYLPKENRFSRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR+  A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LAADPKGRACLIASIEKNKLVYVLNRNAQAELTISSPLEAHKPGVLVLSLVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSEADQD TG+A  EA+  L +YELDLGLNHV RKWS+ VD  +++L  VPG
Sbjct: 187  VFAALEIDYSEADQDPTGEAGREAEAQLVYYELDLGLNHVVRKWSDTVDPTSSLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  V Y++      R  IPRR  A    +R   IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRRGATEDPQRKRTIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FKVT++   D+E      V  LKIKYFDTIP+  S+C+LKSG+LFAAS
Sbjct: 307  FFFLLQTDDGDLFKVTIDMVEDSEGNPTGEVRRLKIKYFDTIPIAHSLCILKSGFLFAAS 366

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D +    +S    T+    + PV+F PR L+NL  +E + S+ P+
Sbjct: 367  EFGNHHFYQFEKLGDDDEEPEFTSDDFPTDPRASYNPVYFHPRPLENLALVESLNSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+ +CG   RS+ R+L+ GL VSE+  S+LPG PSAVWT K    
Sbjct: 427  VDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIVASELPGTPSAVWTTKLTKY 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            DE+D YIV+SF NATLVLSIGETVEEV++SGFL + P+LAV  +G++ L+QVHP GIRHI
Sbjct: 487  DEYDGYIVLSFTNATLVLSIGETVEEVTESGFLTSVPTLAVQQLGEEGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
             + GR+NEW  P  R+IV   +N  QVVIALS GE++YFE+D  G L E  EK EMSG V
Sbjct: 547  VQ-GRVNEWPAPQHRSIVAAATNESQVVIALSSGEIVYFEMDADGSLAEYDEKKEMSGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEG  RS FLAVG  D T+RIL LDP+  +++ S+Q+++S P SL  + ++ 
Sbjct: 606  TSLSLGKVPEGLTRSSFLAVGCDDCTVRILGLDPESTLEMKSIQALTSAPSSLSIMSMED 665

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S GG        +L+L+ GL +GV  RTV+D VTG+L+D+RS+FLG +P KLF V V  +
Sbjct: 666  STGGN-------TLYLHIGLHSGVYLRTVLDEVTGELTDTRSKFLGPKPTKLFQVSVQNQ 718

Query: 705  AAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              +L LSSRPWLGY+      F++TPLSY  LEY  +FSS+QC+EG+V +  N LR+FTI
Sbjct: 719  PCVLALSSRPWLGYMDPLSKNFVMTPLSYAELEYGWNFSSEQCLEGMVGIHANFLRIFTI 778

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+LGET  + ++PL YTP+R V  P++     IE D   L  E R         A  + +
Sbjct: 779  EKLGETMIQKSIPLTYTPKRLVKHPEQPYFYTIEADNNTLPPELR---------AQLLAQ 829

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQD 880
            +G  N D             L  E +GYP+A+  +W SCI V+DP S     L  ++L+ 
Sbjct: 830  SGAVNGDATV----------LPPEDFGYPRAKG-RWASCISVVDPVSEEPRVLQRVDLEG 878

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S   V F  +E  + L VGT K +   P R    GYIH+YRF E+G+SLE +HKT
Sbjct: 879  NEAAVSAAVVPFASQEGESFLIVGTGKDMVLNP-RQFTEGYIHVYRFHEDGRSLEFIHKT 937

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +VE  P+AL  FQGRLLAGIG  LR+YDLG ++LLRK + ++    IVS+ T  +RI VG
Sbjct: 938  RVEEPPMALIPFQGRLLAGIGKTLRVYDLGLRQLLRKAQGEVAQQLIVSLQTQGNRIVVG 997

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+Q+   +  Y+ + N+L  F DD++ RW T    +D++++AG D+FGN++ VR P+  S
Sbjct: 998  DVQQGVTYVVYKPESNKLIPFVDDTINRWTTCITMVDYESVAGGDRFGNLWIVRAPERAS 1057

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
             E +E  +  ++   +  L+GAPN++  +  F+  D+ TS+ K +LV GG + +++  + 
Sbjct: 1058 QESDEPGSEVQLLHARSYLHGAPNRLNLMAHFYPQDLPTSITKTNLVVGGQDVLVWSGIQ 1117

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G ++ F SR+DVDFF +LE HMR E PPL GRDH+ YR  Y PVK VIDGDLCE+F 
Sbjct: 1118 GTVGVLIPFVSREDVDFFQNLESHMRSEDPPLAGRDHLIYRGYYVPVKGVIDGDLCERFS 1177

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             L  D ++ IA ELDR+  E+ +K+ +IR +
Sbjct: 1178 LLPNDKKQMIAGELDRSVREVERKISDIRTR 1208


>gi|340959394|gb|EGS20575.1| putative pre-mRNA splicing protein [Chaetomium thermophilum var.
            thermophilum DSM 1495]
          Length = 1213

 Score = 1197 bits (3096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1235 (49%), Positives = 825/1235 (66%), Gaps = 56/1235 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLT+Q PT I  A+ G FSGTK  +I+ A G  L LL+P+   G++ T+VS +IFG
Sbjct: 8    MFLYSLTIQPPTTITQALLGQFSGTKEQQIITASGSRLTLLQPDPRQGKVNTIVSHDIFG 67

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR++A FRL GS KDYI++ +DSGRI I+EY P +N F +IH ETFGKSG RR++PGQY
Sbjct: 68   IIRAMAAFRLAGSHKDYIILATDSGRIAIIEYLPKENRFQRIHLETFGKSGVRRVIPGQY 127

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR+  A LTISSPLEAHK   IV S+  +D G+ NP
Sbjct: 128  LAADPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHKPGVIVLSLVALDVGYSNP 187

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E +YSEADQD TGQAA + +  L +YELDLGLNHV RKWS+ VD  +++L  VPG
Sbjct: 188  VFAALEYEYSEADQDPTGQAAKQLEMQLVYYELDLGLNHVVRKWSDTVDPTSSLLFQVPG 247

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKT---L 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IV+   H+ K     
Sbjct: 248  GNDGPSGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPNRKRTIVAGVMHKLKGSAGA 307

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FKVT++       +    V  +KIKYFDT+P+  S+C+LKSG+LF AS
Sbjct: 308  FFFLLQTEDGDLFKVTIDMVEDEKGNPTGEVKRVKIKYFDTVPIAHSLCILKSGFLFVAS 367

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETEEG--FQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D D    +S     +    + PV+F+PR L+NLV +E ++S+ P+
Sbjct: 368  EFGNHHFYQFEKLGDDDDEPEFTSDDFPADWNAPYNPVYFKPRPLENLVLVESIDSMNPL 427

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +  ++ANL  E+APQI+ +CG G RSS R+L+ GL VSE+  S+LPG PSAVWT K    
Sbjct: 428  VGCKVANLTGEDAPQIYAICGNGARSSFRMLKHGLEVSEIVASELPGTPSAVWTTKLTKY 487

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            DE+DAYIV+SF NATLVLSIGETVEEVSDSGFL T P+LAV  +G++ L+Q+HP GIRHI
Sbjct: 488  DEYDAYIVLSFTNATLVLSIGETVEEVSDSGFLTTVPTLAVQQMGEEGLIQIHPKGIRHI 547

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
             + GR+NEW  P  R+IV   +N  QVVIALS GE++YFE+D  G L E  EK +MSG V
Sbjct: 548  VQ-GRVNEWPAPQHRSIVAATTNENQVVIALSSGEIVYFEMDADGSLAEYDEKKQMSGTV 606

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEG +RS FLAVG  D T+RILSLDP+  +++ S+Q++++ P SLL + ++ 
Sbjct: 607  TSLSLGKVPEGLRRSSFLAVGCDDCTVRILSLDPESTLEMKSIQALTAAPSSLLIMSMED 666

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S GG        +L+L+ GL +GV  RTV+D +TG+L+D+R +FLG +P KLF V V  +
Sbjct: 667  STGG-------TTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPTKLFQVTVQNQ 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   I R  F++TPLSY  L Y  SF+S+QC EG+V +  N LR+FT
Sbjct: 720  TCVLALSSRPWLGYTAPITRN-FVMTPLSYTELGYTWSFNSEQCQEGMVGIHANYLRIFT 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+LG+T  + + PL YTP+R V  P++    +IE D   L  E R     +  E +G  
Sbjct: 779  IEKLGQTMIQKSCPLTYTPKRLVKHPEQPYFYVIEADNNTLPPELR----AQLLEQSG-A 833

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLL---EL 878
             NG+  +              L  E +GYPKA   +W SCI ++DP S     +L   EL
Sbjct: 834  VNGDATV--------------LPPEDFGYPKARG-RWASCIEIVDPVSEEQPRVLKRIEL 878

Query: 879  QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
            + NEAA S   V F  ++  + L VGT K +   P R    G IH+YRF+++G+ LE +H
Sbjct: 879  EGNEAAVSAAVVPFASQDGESFLIVGTGKDMVLNP-RASTEGAIHVYRFIDDGRDLEFIH 937

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            KT +E  PLA C FQGRLLAGIG +LR+YDLG K+LLRK + ++ P  IVS++T  +RI 
Sbjct: 938  KTIIEEPPLAFCPFQGRLLAGIGKMLRIYDLGLKQLLRKAQAEVSPQLIVSLDTRHNRIV 997

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+Q    +  Y+ D N+L  FADD++ RW T    +D++++AG DKFGN++ VR P+ 
Sbjct: 998  VGDVQHGMTYVVYKPDSNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNLWIVRCPER 1057

Query: 1059 VSDEIEEDPTGGKIKWEQGK--LNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIY 1116
             S  +E D  G +++    +  L+GAPN+++ +  F+  D+ TS+ K +LV GG + +++
Sbjct: 1058 AS--LESDEPGSEVQLLHARPYLHGAPNRLDLMAHFYPQDLPTSICKTNLVVGGQDVLVW 1115

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLC 1176
              + G++G ++ F +R+D DFF +LE HMR E PPL GRDH+ YR  Y PVK VIDGDLC
Sbjct: 1116 SGIQGTVGVLIPFVTREDADFFQNLESHMRAEDPPLAGRDHLIYRGYYVPVKGVIDGDLC 1175

Query: 1177 EQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            E+F  L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1176 ERFTLLPNDKKQMIAGELDRSVREIERKISDIRTR 1210


>gi|326469377|gb|EGD93386.1| splicing factor 3B subunit 3 [Trichophyton tonsurans CBS 112818]
          Length = 1188

 Score = 1195 bits (3091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1229 (50%), Positives = 817/1229 (66%), Gaps = 66/1229 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G FSGTK  +IV A G  L L R + + G+++TL S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPAQGKVQTLYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY P++N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIVEYVPAQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+E DQD TGQA  E +K L +YELDLGLNHV R+W++PVD  A+ML  VPG
Sbjct: 187  IFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRRWADPVDRTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFF 296
            G DGPSGVLVCAE+ ++Y++      R  IPRR    + P ER   I +   H+ +  FF
Sbjct: 247  GADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENP-ERKRCITAGVMHKMRGAFF 305

Query: 297  FLLQTEYGDIFKVTLE---HDNE----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            FLLQ+E GD+FKVT+E    +NE     V  LK+KYFDT+P+ +S+C+LKSG+LF ASE 
Sbjct: 306  FLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365

Query: 350  GNHALYQFQAIGADPD-VEASSSTLMET-EEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
            GN   YQF+ +G D D +E  S        E   PV+F+PR  +NL  +E + SL P+M 
Sbjct: 366  GNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
              I N+ EE+APQI+TLCG G R           +SE+  S+LP VPSAVWT K + ND+
Sbjct: 426  ASITNITEEDAPQIYTLCGTGAR-----------ISEIVESELPSVPSAVWTTKLSRNDQ 474

Query: 468  FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
            FDAYIV+          IGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  
Sbjct: 475  FDAYIVL----------IGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 524

Query: 528  DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVAC 586
            D R+NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK +MSG V C
Sbjct: 525  DQRVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTC 584

Query: 587  LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
            L +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S 
Sbjct: 585  LSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDST 644

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
             G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLG++P KLFSV V  + A
Sbjct: 645  SGG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 698

Query: 707  MLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
            +L LSSR WLGY  +    F LTPL+Y  LE++ +FSS+QCVEG+V + G  LR+F+IE+
Sbjct: 699  VLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEK 758

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
            L     +  +PL YTPR FV  P+  L  +I +D   L+   +         A  + E+ 
Sbjct: 759  LDNNLLQEPIPLAYTPRNFVRHPEYPLFYVIGSDNNILSPATK---------AKLLSEST 809

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEA 883
              N D  E          L  E +GYP+  ++ W S I+V+DP  + +    LEL+DNEA
Sbjct: 810  AVNGDSAE----------LPPEDFGYPRG-TNHWASSIQVVDPIHTKSVLSNLELEDNEA 858

Query: 884  AFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE 943
            A SI  V+F  +E  T L VGT K +   P R    G+IHIYRF EEGK LE +HKT+VE
Sbjct: 859  AVSIAAVSFTSQEDETFLVVGTGKDMVVSP-RTFTCGFIHIYRFQEEGKELEFIHKTKVE 917

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
              PLAL  FQGRLLAGIGP LR+YDLG ++LLRKC+ ++ P  IV + T   RI V D+Q
Sbjct: 918  QPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGLQTQGSRIIVSDVQ 977

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            ES  +  Y+  EN L  FADD +PRW T    +D++T+AG DKFGNI+ +R P   S+E 
Sbjct: 978  ESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFGNIWLLRCPTKASEEA 1037

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL 1123
            +ED +G  +  E+  L GAPN++  ++ F+  D+ TS+QK  LV GG + +++  + G++
Sbjct: 1038 DEDGSGAHLIHERQYLQGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTV 1097

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
            G  + F +RDDVDFF  LEM +  ++PPL GRDH+ YR  Y P K VIDGDLCE F  L 
Sbjct: 1098 GMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLIYRGYYAPCKGVIDGDLCETFLLLP 1157

Query: 1184 LDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             D ++ IA ELDR+  EI +K+ ++R K+
Sbjct: 1158 NDKKQAIAGELDRSVREIERKISDMRTKV 1186


>gi|429859776|gb|ELA34542.1| pre-mRNA-splicing factor rse1 [Colletotrichum gloeosporioides Nara
            gc5]
          Length = 1212

 Score = 1192 bits (3083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1232 (49%), Positives = 826/1232 (67%), Gaps = 50/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLTLQ PT +  A+ G FSGTK   IV A G  L LLRP+ S G++ TL+S +IFG
Sbjct: 7    MFLYSLTLQPPTNVTLAVLGQFSGTKEQNIVTASGSRLTLLRPDPSQGKVITLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+A FRL GS KDY+++ +DSGRI I+EY P++N F ++H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSMAAFRLAGSNKDYLILATDSGRITIVEYIPAQNRFQRLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR+  A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHKPGVLVLSMVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E++Y+EADQD TG+AA EA+  L +YELDLGLNHV RKWSEPVD  A++L  VPG
Sbjct: 187  VFAALEIEYTEADQDPTGEAAREAETQLVYYELDLGLNHVVRKWSEPVDPTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GQDGPSGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRHIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FK  ++       +    V  LKIKYFDT+PV++S+C+LKSG+L+AAS
Sbjct: 307  FFFLLQTEDGDLFKAVIDMVEDADGNPTGEVKRLKIKYFDTVPVSSSLCILKSGFLYAAS 366

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLM--ETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGNH  YQF+ +G D + +  SS     + + G+  V+F PR L+NL  +E ++S+ P+
Sbjct: 367  QFGNHQFYQFEKLGDDDEEKEFSSDDFPADPKAGYDAVYFYPRPLENLALVESIDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T CG G RS+ R+L+ GL V+E+  S+LPG+PSAVWT+K +  
Sbjct: 427  LDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVASELPGIPSAVWTLKLSRG 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P+LA  L+G+D L+QVHP GIRHI
Sbjct: 487  DQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R  G+INEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  RH-GQINEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDGDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D+T+R+LSLDPD  ++  SVQ++++PP SL      A
Sbjct: 606  TCLSLGEVPEGRLRSSFLAVGCDDSTVRVLSLDPDSTLESKSVQALTAPPSSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  +D +   ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P +LF V V GR
Sbjct: 660  IIAMDDSSSGGSALYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPVRLFQVTVQGR 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              ++ LSSRPWLGY   I RG F++TPL+Y  LE+  +FSS+QC EGVV + G +LR+F 
Sbjct: 720  TCVIGLSSRPWLGYSDPITRG-FVVTPLNYVDLEWVWNFSSEQCEEGVVGIQGQSLRIFA 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE LG+T  + ++PL YTPRR +  P   +   +E+D   L  + R         A  + 
Sbjct: 779  IENLGDTITQKSIPLTYTPRRLLKHPDHPMFYTVESDNNTLPPDLR---------AKLIA 829

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
            E G      + NGD       L  +++GYPK +  +W SCI V+DP S     L  ++L 
Sbjct: 830  EPG------VVNGDATV----LPPDEFGYPKGKG-RWASCISVIDPLSEEQRVLQTVDLD 878

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            DNEAA S   V+F  +++   L VGT K +   P R    GYIH+YRF E+G  LE +HK
Sbjct: 879  DNEAAVSAAIVSFASQDNENFLIVGTGKDMIVNP-RQFTEGYIHVYRFGEDGHELEFIHK 937

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  P AL  FQGRLLAG+G  LR+YDLG +++LRK +  + P  IVS++T   RI V
Sbjct: 938  TKVEEPPTALLAFQGRLLAGVGKTLRIYDLGLRQMLRKSQADVAPQLIVSLSTQGSRIVV 997

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q    +  Y+   N+L  F DD++ RW+T    +D++++AG DKFGN++ VR P+  
Sbjct: 998  GDVQHGVTYVVYKPTTNKLIPFVDDTIARWVTCTTMVDYESVAGGDKFGNMFLVRCPEKA 1057

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S E +E+  G  +   +  L+GAP+++  +   +  DV TS+ K SLV GG + +++  +
Sbjct: 1058 SQEADEEQAGLHLLNTRDYLHGAPHRLNLLSHSYTQDVPTSITKTSLVVGGQDVLLWSGI 1117

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G++G  + F +R+DVDFF +LE HMR E  PL GRDH+ YR  Y PVK VIDGDLCE++
Sbjct: 1118 NGTIGVFIPFVTREDVDFFQNLEQHMRTEDAPLAGRDHLMYRGYYVPVKGVIDGDLCERY 1177

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  D +  IA ELDR+  EI +K+ +IR +
Sbjct: 1178 TLLPNDKKLMIAGELDRSVREIERKISDIRTR 1209


>gi|380490733|emb|CCF35810.1| pre-mRNA-splicing factor rse-1 [Colletotrichum higginsianum]
          Length = 1212

 Score = 1191 bits (3082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1232 (49%), Positives = 827/1232 (67%), Gaps = 50/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLTLQ PT +  A+ G FSGTK   IV A G  L LLRP+ S G++ T++S +IFG
Sbjct: 7    MFLYSLTLQPPTNVTQAVLGQFSGTKEQNIVTASGSRLTLLRPDPSQGKVITVLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+A FRL GS KDY+++ +DSGRI I+EY P++N F ++H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSMAAFRLAGSNKDYLILATDSGRITIIEYIPAQNRFQRLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSMVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E++Y+EADQD TG+AA EA+  L +YELDLGLNHV RKWSE VD  A+ML  VPG
Sbjct: 187  VFAALEIEYTEADQDPTGEAAREAETQLVYYELDLGLNHVVRKWSESVDPTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R    VS   H+ K     
Sbjct: 247  GQDGPSGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRHAVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FK TL+       +    V  LKIKYFDTIPV++S+C+LKSG+L+AAS
Sbjct: 307  FFFLLQTEDGDLFKATLDMVEDTDGNPTGEVKRLKIKYFDTIPVSSSLCILKSGFLYAAS 366

Query: 348  EFGNHALYQFQAIGADPD-VEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGNH  YQF+ +G D D +E SS     + + G+  V+F PR L+NL  +E ++S+ P+
Sbjct: 367  QFGNHQFYQFEKLGDDDDELEFSSDDFPTDPKAGYDAVYFHPRPLENLALVESIDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T CG G RS+ R+L+ GL V+E+  S+LPG+PSAVWT+K N  
Sbjct: 427  LDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVASELPGIPSAVWTLKLNRG 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P+LA  L+G+D L+QVHP GIRHI
Sbjct: 487  DQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R  G +NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  RH-GHVNEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDGDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D+T+R+LSLDP+  ++  SVQ++++PP SL      A
Sbjct: 606  TCLSLGEVPEGRLRSSFLAVGCDDSTVRVLSLDPESTLESKSVQALTAPPSSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  +D +   ++L+L+ GL +GV  RTV+D +TG+L+D+R +FLG +P +LF V V GR
Sbjct: 660  IIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPVRLFQVTVQGR 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              ++ LSSRPWLGY   I RG FL+TPL+Y  LE+  +FSS+QC EGVV + G +LR+F 
Sbjct: 720  TCVIGLSSRPWLGYSDPITRG-FLVTPLNYVDLEWVWNFSSEQCEEGVVGIQGQSLRIFA 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE LG+T  + ++PL YTPRR +  P+  +   IE D   L  + R         A  + 
Sbjct: 779  IENLGDTITQKSIPLSYTPRRLLKHPEHPMFYTIEADNNTLPPDLR---------AKLIA 829

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
            E G      + NGD       L  +++GYPK +  +W SCI V+DP S     L  ++L 
Sbjct: 830  EPG------VVNGDARI----LPPDEFGYPKGKG-RWASCISVIDPLSEEQRVLQTVDLD 878

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V+F  +++ + L VGT K +   P R    GYIH+YRF E+G  LE +HK
Sbjct: 879  NNEAAVSAAIVSFASQDNESFLIVGTGKDMIVNP-RQFSEGYIHVYRFSEDGHELEFIHK 937

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  P AL  FQGRLLAGIG  LR+YDLG +++LRK +  + P  IVS++T   RI V
Sbjct: 938  TKVEEPPSALLGFQGRLLAGIGQTLRIYDLGLRQMLRKAQADVAPQLIVSLSTQGSRIIV 997

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q    +  Y+   N+L  F DD++ RW+T    +D++++ G DKFGNI+ VR P+  
Sbjct: 998  GDVQHGITYVVYKPTTNKLIPFVDDTISRWVTCTTMVDYESVVGGDKFGNIFLVRCPEKA 1057

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S E +E+  G  +   +  L+G P+++  +   +  DV TS+ K SLV GG + +++  +
Sbjct: 1058 SQEADEESGGLHLLNTRDYLHGTPHRLSLLGHSYTQDVPTSITKTSLVVGGQDVLLWSGI 1117

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G++G  + F +R+DVDFF +LE HMR E  PL GRDH+ YRS Y PVK VIDGDLCE++
Sbjct: 1118 NGTIGVFIPFVTREDVDFFQNLEQHMRTEDAPLAGRDHLMYRSYYVPVKGVIDGDLCERY 1177

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  + ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1178 TLLPSEKKQMIAGELDRSVREIERKISDIRTR 1209


>gi|336257679|ref|XP_003343663.1| hypothetical protein SMAC_08834 [Sordaria macrospora k-hell]
 gi|380091896|emb|CCC10625.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1209

 Score = 1191 bits (3081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1232 (49%), Positives = 820/1232 (66%), Gaps = 53/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLT+Q PT +  A+ G FSGTK  +I+ A G  L LL+P+   G++ TL+S +IFG
Sbjct: 7    MFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R++A FRL GS KDYI++ +DSGRI I+EY P  N F +IH ETFGKSG RR++PGQY
Sbjct: 67   IVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LAADPKGRACLISSLEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYS+ADQD TGQA  E +  L +YELDLGLNHV RKWS+ VD  +++L  VPG
Sbjct: 187  VFAALEIDYSDADQDPTGQAREEVETQLVYYELDLGLNHVVRKWSDTVDRTSSLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  V Y++      R  IPRR  A    +R  +IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRKGATEDPQRKRVIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FK+T++       +    V  LKIKYFDTIPV  S+C+LKSG+LFAAS
Sbjct: 307  FFFLLQTDDGDLFKITIDMIEDADGNPTGEVKRLKIKYFDTIPVATSLCILKSGFLFAAS 366

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D +    SS    T+    + PV+F PR L+NLV +E ++S+ P 
Sbjct: 367  EFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESIDSMNPQ 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  ++APQI+++CG G RS+ R L+ GL VSE+  S+LPG PSAVWT K    
Sbjct: 427  VDCKVANLTGDDAPQIYSVCGNGARSTFRSLKHGLEVSEIVASELPGTPSAVWTTKLTKY 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D++DAYIV+SF N TLVLSIGETVEEVSDSGFL T P+LAV  +G+D L+QVHP GIRHI
Sbjct: 487  DQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTTAPTLAVRQMGEDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
             + GR+NEW  P  R+IV   +N  QVVIALS GE++YFE+D  G L E  EK EMSG V
Sbjct: 547  VQ-GRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYDEKKEMSGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEG KRS FLAVG  D T+RILSLDPD  +++ S+Q++++ P +L  + ++ 
Sbjct: 606  TSLSVGQVPEGLKRSSFLAVGCDDCTVRILSLDPDSTLEMKSIQALTAAPSALSIMSMED 665

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S GG        +L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P KLF V V  +
Sbjct: 666  SFGG-------FTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQDQ 718

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   + +G F++TPLSY  LEY  +FSS+QC+EG+V +  N LR+F+
Sbjct: 719  PCVLALSSRPWLGYTDPLTKG-FMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRIFS 777

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+LG+   + ++PL YTP+R V  P++     IE+D   L  E R              
Sbjct: 778  IEKLGDNMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTLPPELRAKL----------- 826

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
                  ++Q  NGD       L  E +GYPKA+  +W SCI ++DP S     L  ++L 
Sbjct: 827  ------LEQQSNGDATI----LPPEDFGYPKAKG-RWASCISIIDPISDEPRVLQRIDLD 875

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V F  +E  + L VGT K +   P R    GYIH+YRF E+G+ LE +HK
Sbjct: 876  NNEAAVSAAIVPFASQEGESFLVVGTGKDMVLNP-RQFTEGYIHVYRFHEDGRDLEFIHK 934

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  P+AL  FQGRLLAG+G  LR+YDLG K+LLRK +  + P  IVS+ +  +RI V
Sbjct: 935  TRVEEPPMALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIV 994

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q+   +  Y+ + N+L  F DD++ RW T    +D++++A  DKFGNI  VR P+ V
Sbjct: 995  GDLQQGVTYVVYKAEGNRLIPFVDDTLNRWTTCTTMVDYESVASGDKFGNISIVRCPERV 1054

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S + +E  +   +   +  L+G PN++   V F   D+ TS+ K SLV GG + +++  +
Sbjct: 1055 SQDTDEPGSEIHLMHARNYLHGTPNRLSLQVHFFTQDLPTSICKTSLVVGGQDVLLWSGL 1114

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G++G  + F SR+DVDFF +LE HMR E PPL GRDH+ YR  Y PVK VIDGDLCE+F
Sbjct: 1115 QGTVGVFIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGVIDGDLCERF 1174

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1175 SLLPNDKKQMIAGELDRSVREIERKISDIRTR 1206


>gi|310793065|gb|EFQ28526.1| CPSF A subunit region [Glomerella graminicola M1.001]
          Length = 1212

 Score = 1188 bits (3074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1232 (49%), Positives = 830/1232 (67%), Gaps = 50/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLTLQ PT +  A+ G FSGTK   I+ A G  L LLRP+ S G++ TL+S +IFG
Sbjct: 7    MFLYSLTLQPPTNVTQAVLGQFSGTKEQNIITASGSRLTLLRPDPSQGKVITLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+A FRL GS KDY+++ +DSGRI I+EY P++N F ++H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSMAAFRLAGSNKDYLILATDSGRITIIEYIPAQNRFQRLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSMVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E++Y+EADQD TG+AA EA+  L +YELDLGLNHV RKWSEPVD  A++L  VPG
Sbjct: 187  VFAALEIEYTEADQDPTGEAAREAETQLVYYELDLGLNHVVRKWSEPVDPTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   +VS   H+ K     
Sbjct: 247  GQDGPSGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRHVVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFL+QTE GD+FK T++       +    V  LKIKYFDTIPV++S+C+LKSG+L+AAS
Sbjct: 307  FFFLIQTEDGDLFKATIDMVEDADGNPTGEVKRLKIKYFDTIPVSSSLCILKSGFLYAAS 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGNH  YQF+ +G  D ++E SS     + + G+  V+F PR L+NL  +E ++S+ P+
Sbjct: 367  QFGNHQFYQFEKLGDDDEELEFSSDDFPTDPKAGYDAVYFHPRPLENLALVESIDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T CG G RS+ R+L+ GL V+E+  S+LPG+PSAVWT+K N  
Sbjct: 427  LDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVASELPGIPSAVWTLKLNRG 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P+LA  L+G+D L+QVHP GIRHI
Sbjct: 487  DQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R+ G++NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  RQ-GQVNEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDGDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D+T+R+LSLDP+  ++  SVQ++++PP SL      A
Sbjct: 606  TCLSLGEVPEGRLRSSFLAVGCDDSTVRVLSLDPESTLESKSVQALTAPPSSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  +D +   ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P +LF V V GR
Sbjct: 660  IIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPVRLFQVTVQGR 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              ++ LSSRPWLGY   I RG FL+TPL+Y  LE+  +FSS+QC EGVV + G +LR+F 
Sbjct: 720  TCVIGLSSRPWLGYSDPITRG-FLVTPLNYVDLEWVWNFSSEQCEEGVVGIQGQSLRIFA 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE LG+T  + ++PL YTPRR +  P+  +   IE D   L  + R         A  + 
Sbjct: 779  IENLGDTITQKSIPLSYTPRRLLKHPEYPMFYTIEADNNTLPPDLR---------AKLIA 829

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
            E G      + NGD       L  +++GYPK +  +W SCI V+DP + +   L  ++L 
Sbjct: 830  EPG------VVNGDARI----LPPDEFGYPKGKG-RWASCISVIDPLAEDQRVLQTIDLD 878

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V+F  ++  + L VGT K +   P R    GYIH+YRF E+G  LE +HK
Sbjct: 879  NNEAAVSAAIVSFASQDSESFLIVGTGKDMVVNP-RQFSEGYIHVYRFGEDGHELEFIHK 937

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  P AL  FQGRLLAGIG  LR+YDLG +++LRK +  + P  IVS++T   RI V
Sbjct: 938  TKVEEPPSALLGFQGRLLAGIGKTLRIYDLGLRQMLRKAQADVTPQLIVSLSTQGSRIIV 997

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q    +  Y+   N+L  F DD+V RW+T    +D++++AG DKFGN++ VR  +  
Sbjct: 998  GDVQHGITYVVYKPTTNKLIPFVDDTVSRWVTCTTMVDYESVAGGDKFGNMFLVRCSEKA 1057

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            + E +++  G  +   +  L+G P+++  +   +  DV TS+ K SLV GG + +++  +
Sbjct: 1058 TQEADDESGGLHLINTRDYLHGTPHRLSLLAHSYTQDVPTSITKTSLVVGGQDVLLWSGI 1117

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G++G  + F +R+DVDFF +LE HMR E  PL GRDH+ YR  Y PVK VIDGDLCE++
Sbjct: 1118 NGTIGVFIPFVTREDVDFFQNLEQHMRTEDAPLAGRDHLMYRGYYVPVKGVIDGDLCERY 1177

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  + ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1178 TLLPSEKKQMIAGELDRSVREIERKISDIRTR 1209


>gi|116207186|ref|XP_001229402.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88183483|gb|EAQ90951.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 1211

 Score = 1188 bits (3073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/1231 (49%), Positives = 824/1231 (66%), Gaps = 49/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLT+Q PT I  A+ G FSGTK  +I+ A G  L LL+P+   G++ T++S +IFG
Sbjct: 7    MFLYSLTIQPPTTISQALLGQFSGTKEQQIITASGSRLTLLQPDPRQGKVNTVLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+A FRL GS KDYI++ +DSGRI I+EY P  N F +IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSIASFRLAGSHKDYIILATDSGRIAIIEYQPKTNRFSRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I   EK KLVYVLNR+  A LTISSPLEAHK+  +V S+  +D G+ NP
Sbjct: 127  LAADPKGRACLIAGVEKNKLVYVLNRNAQAELTISSPLEAHKAGVLVLSLVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSEADQD +G+A  E +  L +YELDLGLNHV RKWS+ VD  +++L  VPG
Sbjct: 187  VFAALEIDYSEADQDPSGEAGKEPEAQLVYYELDLGLNHVVRKWSDAVDPTSSLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  V Y++      R  IPRR  A    +R   IV+   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRRGATEDPQRKRTIVAGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+ KVTL+   DN+      V  LK+KYFDTIP+  S+C+LKSG+LF+A 
Sbjct: 307  FFFLLQTDDGDLMKVTLDMVEDNDGNPTGEVRRLKVKYFDTIPIAQSLCILKSGFLFSAG 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH LYQF+ +G  D ++E SS     ++   + PV+F PR L+NLV +E ++S+ P+
Sbjct: 367  EFGNHHLYQFEKLGDDDEELEFSSDDFPTDSRASYNPVYFHPRPLENLVLVESMDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D +IANL  E+APQI+T+CG   RS+ R+L+ GL VSE+  S+LPG P+AVWT K    
Sbjct: 427  IDCKIANLTGEDAPQIYTVCGNRARSTFRMLKHGLEVSEIVASELPGTPAAVWTTKLTKY 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            DE+D YIV+SF NATLVLSIGETVEEV++SGFL + P+LAV  +G++ L+QVHP GIRHI
Sbjct: 487  DEYDGYIVLSFTNATLVLSIGETVEEVTESGFLTSVPTLAVQQLGEEGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
             + GR+NEW  P  R+IV   +N  QVVIALS GE++YFE+D  G L E  EK EMSG V
Sbjct: 547  VQ-GRVNEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADGSLAEYDEKKEMSGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEG +RS FLAVG  D T+RILSLDP+  +++ S+Q+++S P SLL + ++ 
Sbjct: 606  TSLSLGRVPEGLRRSSFLAVGCDDCTVRILSLDPESTLEMKSIQALTSAPSSLLVMAMED 665

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S GG        +L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P KLF V V  +
Sbjct: 666  STGG-------MTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQNQ 718

Query: 705  AAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              +L LSSRPWLGY       F +TPL Y  LE+  +FSS+QC+EG+V +  N LR+FTI
Sbjct: 719  PCVLALSSRPWLGYTDPITKNFSMTPLIYSELEFGWNFSSEQCLEGMVGIHANFLRIFTI 778

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            ERLG+T  + ++PL YTP+R V  P++     IE+D   L  E R     +  E +G   
Sbjct: 779  ERLGDTMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTLPPELR----AQLLEQSG-AV 833

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQD 880
            NG+  +              L  E +GYP+A + +W SCI V+DP     + L  ++ + 
Sbjct: 834  NGDAAI--------------LPPEDFGYPRA-TGRWASCISVVDPLGEEPSVLQRIDFEG 878

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S   V F  +E  + L VGT K +   P R    GYIH+YRF E+G+ LE +HKT
Sbjct: 879  NEAAVSAAVVPFSSQEGESFLIVGTGKDMVLNP-RKFSEGYIHVYRFHEDGRDLEFIHKT 937

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +VE  P+AL  FQGRLLAGIG  LR+YDLG ++LLRK + ++ P  IVS+ T   RI VG
Sbjct: 938  KVEEPPMALIPFQGRLLAGIGKTLRVYDLGLRQLLRKAQGEVAPQLIVSLQTQGSRIIVG 997

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+Q+   +  Y+ + N+L  FADD++ RW T    +D++++AG DKFGNI+ +R  +  S
Sbjct: 998  DVQQGITYVVYKPESNKLLPFADDTINRWTTCTTMVDYESVAGGDKFGNIWILRCSERAS 1057

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
             E +E  +  ++   +  L+GA +++  +  F+  D+ TS+ K +LV GG + +++  + 
Sbjct: 1058 QESDEPGSEIQLLHARNYLHGAQSRLSAMAHFYTQDLPTSIVKTNLVVGGQDVLVWSGIQ 1117

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G ++ F SR+DVDFF +LE HMR E PPL GRDH+ YR  Y PVK VIDGDLCE+F 
Sbjct: 1118 GTVGVLIPFVSREDVDFFQNLESHMRAEDPPLAGRDHLIYRGYYVPVKGVIDGDLCERFS 1177

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1178 LLPNDKKQMIAGELDRSVREIERKISDIRTR 1208


>gi|408400551|gb|EKJ79630.1| hypothetical protein FPSE_00190 [Fusarium pseudograminearum CS3096]
          Length = 1212

 Score = 1187 bits (3071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1232 (48%), Positives = 833/1232 (67%), Gaps = 50/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT +  A+ G F+GT+   I+   G  L LLRP+ S G++ TL+S ++FG
Sbjct: 7    MFLYSLTVQPPTNVTQAVLGQFAGTREQLIITGAGSQLSLLRPDPSQGKVITLLSHDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDY+++ SDSGRI I+EY P++N F ++H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSLAAFRLAGSNKDYLIIASDSGRITIIEYLPAQNRFQRLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYSNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE DQDSTGQA  E    L +YELDLGLNHV RKWS+PVD  A++L  VPG
Sbjct: 187  VFAALEIDYSEVDQDSTGQAMEELDTQLVYYELDLGLNHVVRKWSDPVDPTASILFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENITYRHSNQETFRVAIPRRRGATEDPNRKRTIVSGIMHKLKGNTGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FK++++   D E      V  LK+KYFDT+PV +S+C+LKSG+L+ A+
Sbjct: 307  FFFLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKVKYFDTVPVASSLCILKSGFLYVAT 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN++ YQF+ +G  D ++E  S     + +  ++PV+F PR  +NL  +E + ++ P+
Sbjct: 367  QFGNYSFYQFEKLGDDDEELEFYSDDFPADPKASYEPVYFHPRPTENLALVESIPAMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T+CG GPRSS R+L+ GL V+E+  S+LPG+PSAVWT+K N +
Sbjct: 427  LDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWTLKLNRS 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P+LA  L+GDD L+QVHP GIRHI
Sbjct: 487  EQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G +NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGNVNEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D T+RILSLDP+  ++  SVQ++++ P SL      A
Sbjct: 606  TCLSLGDVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  ED +   ++L+L+ GL +GV  RTV+D +TG+L+D+R +FLG +  +LF V V G+
Sbjct: 660  IIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTVQGK 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   I +G F++TPL+Y  LE+  +FSS+QC EG+V + G +LR+F 
Sbjct: 720  TCVLGLSSRPWLGYADPITKG-FVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFN 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I+RLGET  + ++PL YTP++ V  P + L   IE D   L  E R         A  + 
Sbjct: 779  IDRLGETLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELR---------AQLLA 829

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
            + G      + NGD +     L  E +GYPK  + +W SCI V+DP S     L  ++L+
Sbjct: 830  DPG------VVNGDSK----VLPPEDFGYPKG-TRRWASCINVIDPLSEEGQVLQTIDLE 878

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V+F  +++ + L +GT K +   P R+   GY+HIYRF+E G+ LE +HK
Sbjct: 879  NNEAAVSAAIVSFSSQDNESFLVIGTGKDMVVNP-RSFSEGYLHIYRFLEGGRELEFIHK 937

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  PLAL  FQGR+L  +G  LR+YDLG +++LRK + ++    IVS+NT   RI V
Sbjct: 938  TKVEEPPLALLAFQGRVLVAVGTSLRIYDLGMRQMLRKSQAEVATQQIVSLNTQGSRIIV 997

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q+   +  Y+   N+L  F DD++ RW T    +D++++AG DKFGN++ VR P+  
Sbjct: 998  GDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKA 1057

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S+E +E+ +G  +   +  L+G P+++  +  F+  D+ TS+ KASLV GG E +++  +
Sbjct: 1058 SEEADEEQSGLHLINARDYLHGTPHRVSLMCHFYTQDIPTSITKASLVVGGQEVLLWSGI 1117

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            MG++G  + F SR+D DFF +LE H+R E PPL GRDH+ YR  Y PVK VIDGDLCE++
Sbjct: 1118 MGTIGVFIPFVSREDADFFQNLEQHLRTEDPPLAGRDHLMYRGYYAPVKGVIDGDLCERY 1177

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1178 NLLPNDKKQMIAGELDRSVREIERKISDIRTR 1209


>gi|407919154|gb|EKG12409.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
            phaseolina MS6]
          Length = 1210

 Score = 1184 bits (3062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/1228 (49%), Positives = 810/1228 (65%), Gaps = 44/1228 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            +++YSLT+Q PT +  AI G F+GTK  +I+ A G  L L R +  + RI  +++  +FG
Sbjct: 7    LFMYSLTIQPPTAVHQAILGQFAGTKEQQIITASGSRLVLHRADAQAQRISPVLTHHVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR+LA FRL GS KDYI+V SDSGRI ILEYNP KN+F ++  ETFGKSG RR++PGQY
Sbjct: 67   VIRALAAFRLAGSSKDYIIVASDSGRIAILEYNPQKNIFTQLKLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA MI + EK KLVYVLNRD+ A LTISSPLEAH+  T V+S+ G+D G++NP
Sbjct: 127  LATDPKGRACMIASIEKNKLVYVLNRDSNANLTISSPLEAHRPQTFVFSLIGLDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DY + DQD TG+ A+  QK L +YELDLGLNHV RKWS+ VD  ANML  VPG
Sbjct: 187  IFAALEVDYDDVDQDHTGEVAASKQKELVYYELDLGLNHVVRKWSDAVDRTANMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTLFFF 297
            G DGPSGVLVC E  + Y++      R  IPRR  A    +R   I +   H+ +  FFF
Sbjct: 247  GQDGPSGVLVCGEESITYRHINQDPFRVPIPRRKGATENPQRKRYITAGVMHKMRGAFFF 306

Query: 298  LLQTEYGDIFKVTLEHDNEH-------VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            LLQTE GD+FKVT++   +        VS LKIKYFDT+PV +S+C+LKSGYLF  +E G
Sbjct: 307  LLQTEDGDLFKVTIDMVEDEQGQPTGDVSRLKIKYFDTVPVASSLCILKSGYLFVTAESG 366

Query: 351  NHALYQFQAIG-ADPDVEASSSTLM-ETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            NH  YQF+ +G  D ++E  S     E +  ++PVFF PRG +N+   + V S+ P +  
Sbjct: 367  NHHFYQFEKLGDDDEELEFISDNFSPEPDAPYEPVFFHPRGAENISLAQSVPSMNPTLGC 426

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
            ++ANL +++APQI+T+CG G RS+ + L  GL VSE+  S+LP VP AVWT K    DE+
Sbjct: 427  KVANLTDDDAPQIYTVCGTGARSTFKTLTHGLEVSEIVESELPSVPEAVWTTKIRTGDEY 486

Query: 469  DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            DAYI++SF+N TLVLSIGETVEEV+D+GFL +T +LAV L+G+D+L+QVHP GIRHI+  
Sbjct: 487  DAYIILSFSNGTLVLSIGETVEEVTDTGFLSSTRTLAVQLLGEDALIQVHPKGIRHIQAG 546

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACL 587
            GRINEW  P  RTIV   +N  QV +ALS GE++YFE+D+ G L E  EK EMSG V CL
Sbjct: 547  GRINEWPAPQHRTIVAATTNERQVAVALSSGEIVYFEMDVDGSLAEYDEKKEMSGTVTCL 606

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  
Sbjct: 607  SLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSSS 666

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
            G       ++L+L+ GL +GV  RTV+D +TG+L+D+R+RFLG +  KLF V V  ++A+
Sbjct: 667  GG------STLYLHIGLYSGVYLRTVIDEITGELTDTRTRFLGAKGVKLFRVTVQDQSAI 720

Query: 708  LCLSSRPWLGYIHR--GRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            L  SSR WLGY  +    F LTPL+Y  LE+  SF+S+QC +G+V + G  LR+FTIE L
Sbjct: 721  LATSSRSWLGYSDQQTKAFTLTPLAYAPLEWGWSFNSEQCTQGMVGIQGQHLRIFTIENL 780

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
                    +PL YTPR  V  P + L  +IE+D G L +  R+    +         NG+
Sbjct: 781  SNNLLFENIPLMYTPRNLVRHPTEPLFYVIESDNGVLASSTRQQLLND-----PAAVNGD 835

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
              +              L  E++GYP+AE   W SCI+V+DP S+      LEL++NE+A
Sbjct: 836  AKI--------------LPPEEFGYPRAEG-HWASCIQVVDPISSKEVVHTLELEENESA 880

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
             S+C   F  +   T L VGTAK L   P R+   GY+HIYR  E G+ LE +HKT++E 
Sbjct: 881  VSVCLAPFTSQNDETFLVVGTAKDLVVAP-RSYNCGYVHIYRLQENGRELEFIHKTKMEA 939

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN-KLFPNTIVSINTYRDRIYVGDIQ 1003
             P+AL  FQG+LL G+   LRLYDLG ++LLRK +   + PN ++ + T   RI   D+Q
Sbjct: 940  PPMALLPFQGKLLVGVEADLRLYDLGLRQLLRKAQALNVVPNILIGLQTQGSRIVCSDVQ 999

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            ES  +  Y+  EN+L  F DDS+ RW +    +D++T AG DKFGNI+ VR P   S+E 
Sbjct: 1000 ESVTYVVYKHLENRLIQFCDDSIHRWTSCTAMVDYETTAGGDKFGNIWLVRCPPKASEEA 1059

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL 1123
            +E+ +G  +  E+  L G PN+++ +  F+  D+ TS+QK +LV GG E +++  + G+L
Sbjct: 1060 DEEGSGLHLINERPYLQGTPNRLDLLAHFYTQDIPTSIQKTALVAGGRELLLWSGLQGTL 1119

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
            G  + F SR+DVDFF  LE  +R E PP+ GRDH+AYRS Y PVK VIDGDLCE+F  L 
Sbjct: 1120 GIFIPFVSREDVDFFQSLEQQLRTEDPPIAGRDHLAYRSYYVPVKGVIDGDLCERFLRLP 1179

Query: 1184 LDLQRKIADELDRTPGEILKKLEEIRNK 1211
             D +  IA ELDR+  E+ +K+ + R +
Sbjct: 1180 RDKKETIAAELDRSVREVERKIGDQRTR 1207


>gi|171685748|ref|XP_001907815.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942835|emb|CAP68488.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1235

 Score = 1183 bits (3061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1258 (49%), Positives = 829/1258 (65%), Gaps = 79/1258 (6%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLT+Q PT I  A+ G FSGTK  +I+ A G  L LL+P+   G++ T++S ++FG
Sbjct: 7    MFLYSLTIQPPTTISQALLGQFSGTKEQQIITASGSRLTLLQPDPRQGKVNTILSQDVFG 66

Query: 60   AIRSLAQFRLTGSQK---DYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP 116
             IR++A FRL GS K   DYI++ +DSGRI I+EY P  N F++IH ETFGKSG RR+VP
Sbjct: 67   IIRAIASFRLAGSHKGNLDYIILATDSGRIAIIEYLPKTNRFNRIHLETFGKSGVRRVVP 126

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            GQYLA DPKGRA +I + EK KLVYVLNR+  A LTISSPLEAHK   +V S+  +D G+
Sbjct: 127  GQYLAADPKGRACLIASLEKNKLVYVLNRNAQAELTISSPLEAHKPGVLVLSLVALDVGY 186

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVT 236
             NP+FAA+ELDY+EADQD TGQA  E +  L +YELDLGLNHV RKWS+ VD  +++L  
Sbjct: 187  ANPVFAALELDYTEADQDPTGQAGQEPEAQLVYYELDLGLNHVVRKWSDAVDPTSSLLFQ 246

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE---RGVLIVSAATHRQKT 293
            VPGG DGPSGVLVC E  V Y++      R  IPRR   P E   R   IVS   H+ K 
Sbjct: 247  VPGGSDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRRG-PTEDPQRKRTIVSGVMHKLKG 305

Query: 294  ---LFFFLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYL 343
                FFFLLQTE GD+FKVTL   E DN +    V  LKIKYFDTIP+  S+C+LKSG+L
Sbjct: 306  SAGAFFFLLQTEDGDLFKVTLDMVEDDNGNPTGEVKRLKIKYFDTIPIATSLCILKSGFL 365

Query: 344  FAASEFGNHALYQFQAIGADPDVEASSSTLMETEE--GFQPVFFQPRGLKNLVRIEQVES 401
            F ASEFGNH+LYQF+ +G D +    SS    T+    + PV+FQPR L+NL  +E ++S
Sbjct: 366  FVASEFGNHSLYQFEKLGDDDEELEFSSEEFPTDSRAAYNPVYFQPRPLENLTLVESIDS 425

Query: 402  LMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK 461
            + P +D ++ANL  E+APQI+++CG G RSS R+L+ GL VSE+  S+LPG P+AVWT K
Sbjct: 426  MNPQIDCKVANLTGEDAPQIYSVCGNGARSSFRMLKHGLEVSEIVASELPGTPAAVWTTK 485

Query: 462  KNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSG 521
                DE+DAYIV+SF NATLVLSIGETVEEVSDSGFL T P+LAV  +G++ L+QVHP G
Sbjct: 486  LTKYDEYDAYIVLSFTNATLVLSIGETVEEVSDSGFLTTVPTLAVQQLGEEGLIQVHPKG 545

Query: 522  IRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEM 580
            IRHI + GR+NEW  P  R+IV   +N  QVVIALS GE++YFE+D  G L E  EK EM
Sbjct: 546  IRHIVQ-GRVNEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADGSLAEYDEKKEM 604

Query: 581  SGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFL 640
            SG V  L +  VPEG +RS FLAVG  D T+RILSLDP+  +++ S+Q++++ P SL  +
Sbjct: 605  SGTVTSLSLGRVPEGLRRSSFLAVGCDDCTVRILSLDPESTLEMKSIQALTAAPASLSIM 664

Query: 641  EVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVV 700
             ++ S GG        +L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P KLF V 
Sbjct: 665  SMEDSFGG-------TTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVS 717

Query: 701  VGGRAAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
            V GR  +L L+SRPWLGY   I +G F++TPLSY  LEY  +FSS+QC+EG+V +  N L
Sbjct: 718  VQGRPCVLALNSRPWLGYTDPITKG-FVMTPLSYVDLEYGWNFSSEQCLEGMVGIHANFL 776

Query: 758  R-VFTI---------------------ERLGETFNETALPLRYTPRRFVLQPKKKLMVII 795
            R VF +                       LG+   + ++PL YTP+R V  P++     I
Sbjct: 777  RYVFNLFLLPLLYDDKRDSYAIAMRVDYDLGDNMIQKSIPLTYTPKRLVKHPEQPYFYTI 836

Query: 796  ETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAES 855
            E D   L  E R          A +    N N D             L  E++GYPKA  
Sbjct: 837  EADNNTLPPELR----------AQLLAQSNTNGDAAI----------LPPEEFGYPKAR- 875

Query: 856  DKWVSCIRVLDPRSANTTCL--LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWP 913
            ++W SCI ++DP S   + L  ++L +NEAA S   V+F  ++  + L VGT K +   P
Sbjct: 876  NRWASCISIVDPVSDEPSVLNRVDLDNNEAAISAAVVSFASQDGESFLIVGTGKDMILSP 935

Query: 914  KRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKR 973
             R    GYIH+YRF ++G+ LE +HKT++E  P+AL  FQGRLLAGIG  LR+YDLG K+
Sbjct: 936  -RQFSEGYIHVYRFHDDGRDLEFIHKTKIEEPPMALIPFQGRLLAGIGKTLRIYDLGLKQ 994

Query: 974  LLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAA 1033
            LLRK + ++ P  IVS+ T  +RI VGD+Q+   +  Y+ + N+L  +ADD++ RW T  
Sbjct: 995  LLRKAQAEIAPQLIVSLQTQGNRIVVGDVQQGITYAVYKPESNKLLAWADDTINRWTTCT 1054

Query: 1034 HHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFH 1093
              +D++++AG DKFGN++ +R P+  S E +E  +  ++   +  L+GAPN+   +  F+
Sbjct: 1055 AMVDYESVAGGDKFGNVWILRAPERASQESDEPGSEIQLVHAKSYLHGAPNRTALMAHFY 1114

Query: 1094 VGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLC 1153
              D+ TS+ K +LV GG + +++  + G++G ++ F SR+DVDFF  LE HMR E PPL 
Sbjct: 1115 TQDLPTSITKTNLVVGGQDVLLWSGIQGTVGVLIPFVSREDVDFFQSLESHMRAEDPPLA 1174

Query: 1154 GRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            GRDH+ YR  Y PVK VIDGDLCE+F  L+ D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1175 GRDHLIYRGYYVPVKGVIDGDLCERFALLANDKKQMIAGELDRSVREIERKISDIRTR 1232


>gi|432863837|ref|XP_004070177.1| PREDICTED: splicing factor 3B subunit 3-like [Oryzias latipes]
          Length = 1146

 Score = 1182 bits (3058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/1004 (58%), Positives = 759/1004 (75%), Gaps = 31/1004 (3%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           M+LY++TLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1   MFLYNITLQRATGISHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +RSL  FRLTG  KDYIVVGSDSGRIVILEY+PSKN+F+KIHQETFGKSGCRRIVPGQY
Sbjct: 61  IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQY 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRAVMIGA EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121 LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SE ++   N L+TVPG
Sbjct: 181 MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 240 GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
           G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241 GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           FFL QTE GDIFKVTLE D E V+E+++KYFDTIPV  +MCVLK+G+LF ASEFGNH LY
Sbjct: 300 FFLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
           Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++ E++ PIM  +IA+L  
Sbjct: 360 QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDEQENMSPIMSCQIADLAN 417

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
           E+ PQ++  CGRGP+S+LR+LR GL VSEMAVS+LPG P+AVWTV+++V DEFDAYI+VS
Sbjct: 418 EDTPQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVS 477

Query: 476 FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
           F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+G+D+L+QV+P GIRHIR D R+NEW+
Sbjct: 478 FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536 TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
           TPGK+TIV+   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538 TPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595 GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
           G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E    +GG +  D 
Sbjct: 598 GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVE----MGGVEKQDE 653

Query: 655 PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                    L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654 LGEKGTMGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709 CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
            +SSR WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714 AMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769 FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
           FN+ A PL+YTPR+FV+ P+   +V+IETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774 FNQVAFPLQYTPRKFVIHPETNNLVLIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825 NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
               +      +EN    L +  +G PKA + +W S +R+++P    T   ++L+ NEAA
Sbjct: 834 LA-AEMAAAFLNEN----LPESIFGAPKAGAGQWASLVRLVNPIQGTTLDQVQLEQNEAA 888

Query: 885 FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
           FS+    F +      + VG A+ +   P R++  G+I+ YR    G+ LE +HKT VE 
Sbjct: 889 FSVAVCRFLNTGDDWYVLVGVARDMILNP-RSVSGGFIYTYRLTGGGEKLEFVHKTPVED 947

Query: 945 IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK--LFPNT 986
           +PLA+  FQGR+L G+G +LR+YDLGKK+LLRKCENK  L PNT
Sbjct: 948 VPLAIAPFQGRVLIGVGKLLRIYDLGKKKLLRKCENKVRLPPNT 991



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 92/159 (57%), Positives = 124/159 (77%)

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
            VRLP + SD+++EDPTG K  W++G LNGA  K E +V +HVG+ V SLQK +L+PGG E
Sbjct: 985  VRLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEVVVNYHVGETVLSLQKTTLIPGGSE 1044

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
            S++Y T+ G +G ++ F+S +D DFF HLEMHMR E PP+CGRDH+++RS YFPVK+VID
Sbjct: 1045 SLVYTTLSGGIGILVPFTSHEDHDFFQHLEMHMRSEFPPICGRDHLSFRSYYFPVKNVID 1104

Query: 1173 GDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            GDLCEQF ++    Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 1105 GDLCEQFNSMDTHKQKSVAEELDRTPPEVSKKLEDIRTR 1143


>gi|443896643|dbj|GAC73987.1| predicted DNA methylase [Pseudozyma antarctica T-34]
          Length = 1285

 Score = 1182 bits (3058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/1237 (49%), Positives = 827/1237 (66%), Gaps = 53/1237 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPEN-SGRIETLVSTEIFG 59
            M+LY+LTLQ    + A   G FSGT+  EIVVA+G  LELLRP+  +G++E +VS++ FG
Sbjct: 68   MHLYNLTLQPSGSVHATAVGQFSGTRQQEIVVAKGSRLELLRPDTQTGKVEIIVSSDAFG 127

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRLTG  KDY++VGSDSGRIVILEY PS N FDK+HQETFG+SG RRIVPGQY
Sbjct: 128  VIRSLAAFRLTGGSKDYLIVGSDSGRIVILEYQPSSNSFDKVHQETFGRSGSRRIVPGQY 187

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA MIGA EK KLVY+LNRD  A LTISSPLEAH+ + I++ I G+D GF+NP
Sbjct: 188  LATDPKGRATMIGAMEKAKLVYILNRDAEANLTISSPLEAHRPNGIIHHIVGVDVGFENP 247

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+D SE+D+D++G+A  EA+K LT+YELDLGLNHV R+W+EPVD  +N+L+ VPG
Sbjct: 248  LFACLEVDNSESDRDASGRAFEEAEKTLTYYELDLGLNHVVRRWAEPVDPRSNLLIQVPG 307

Query: 240  G-------GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAER-----GVLIVSAA 287
            G        DGPSGVLVC+E+++ YK+Q  P+ R  IP+R + P ER     G LIV++ 
Sbjct: 308  GYNQNQEKWDGPSGVLVCSEDYITYKHQDQPEHRVPIPKRLN-PIERPNERRGTLIVASV 366

Query: 288  THRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
             H+ K  FFFL+QTE GD+FKVT++H ++ +  L+IKYFDT+PV + +C+L+SG+LF AS
Sbjct: 367  LHKMKNAFFFLVQTEDGDLFKVTMDHQDDEIRALRIKYFDTVPVASGLCILRSGFLFVAS 426

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMET----EEGFQPVFFQPRGLKNLVRIEQVESLM 403
            EFG   LY FQ +G D ++    ST  +         Q   F PR L NL+++++V SL 
Sbjct: 427  EFGPQLLYSFQKLGDDDELPEYISTDYDDYGAGRRRPQLPTFTPRPLDNLMQVDEVPSLD 486

Query: 404  PIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            PI+D    N    ++PQIF  CGRG RSS ++LR GL   E   S LPGVPSAVWT K  
Sbjct: 487  PILDATPLNPLASDSPQIFAACGRGARSSFKMLRHGLEALEAVSSDLPGVPSAVWTTKIT 546

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
              DE+D+YIV+SF N TL+LSIGET+EEVSDSG L ++ +LAV  +G+D+L+QVHP GIR
Sbjct: 547  RRDEYDSYIVLSFVNGTLLLSIGETIEEVSDSGLLTSSSTLAVQQLGEDALLQVHPHGIR 606

Query: 524  HIREDGRINEWRTPG-----KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EK 577
            HI  D +INEW TP      + TIV   +N  QVV+ALS  EL+YFE+DM GQL E  E+
Sbjct: 607  HILVDKQINEWVTPSLPNGRQTTIVATCTNERQVVVALSSNELVYFELDMDGQLNEYQER 666

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
              M   V  + +   PEGR+R+ +LAVG  D+T+RI+SL+P   +  +S+Q++++P  S+
Sbjct: 667  KAMGAPVLTMSMPECPEGRQRTAYLAVGCGDSTVRIVSLEPSSTLASISIQALTAPASSI 726

Query: 638  LFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
               E+  S        H A+ F+N GLQNGVL RTV+D VTGQL+D+R+RFLG +  +L 
Sbjct: 727  CMAEMHDSTVDR----HHATTFVNIGLQNGVLLRTVLDGVTGQLTDTRTRFLGSKAVRLV 782

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
               V G+ A++ LS+R WL + ++ R   TPL ++ L++A SFS++ C +G++ + G+ L
Sbjct: 783  RTRVHGQTAVMALSTRTWLSFTYQSRVQFTPLIFDALDHAWSFSAELCPDGLIGIVGSTL 842

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKK-LMVIIETDQGALT--AEER--EAAKK 812
            R+FTI  L     + ++ L YTPRR    P  + L  + E D   L+  A+ R  EA  K
Sbjct: 843  RIFTIASLASKLKQDSVALSYTPRRMASHPDGQGLFYVAEADHRTLSPGAQRRRVEALDK 902

Query: 813  ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT 872
            E      +  +  G +D             L   ++G  +AE+  W SC+RV+D  +A T
Sbjct: 903  E------LKPHQRGVLD-------------LDPAEFGSIRAEAGNWASCVRVVDGVNAQT 943

Query: 873  TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK 932
            T  +EL DNEAAFSI  V F   +    + VG+A  +   P R+    Y+  YR    G+
Sbjct: 944  THRIELDDNEAAFSIAVVPFASADKQLFVVVGSAVEVVMSP-RSFKKAYLTTYRLGNGGR 1002

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINT 992
             LE++HKT+V+ +PL L  FQGRLLAG+G VLR+Y+LGKK+LLRKCEN+ FP  IV+++ 
Sbjct: 1003 ELEVVHKTEVDDVPLVLRAFQGRLLAGVGKVLRIYELGKKKLLRKCENRSFPTAIVALDA 1062

Query: 993  YRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
               RI VGD+QES  F  Y+  EN+L  FADD +PR++T    +D+DT+A ADKFGN+Y 
Sbjct: 1063 QGSRIVVGDMQESVIFASYKPLENRLVTFADDIMPRYVTRCTMLDYDTVAAADKFGNVYV 1122

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
            VR+  D S  ++ED TG     E+  L GA +K   +  + VGD++TSL +A +VPGG E
Sbjct: 1123 VRIDADTSRSVDEDVTGMTTMHEKPLLMGAAHKATLLAHYFVGDIITSLSRAVMVPGGRE 1182

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
             ++Y  + G++GA++ F S++DVD  + LEM +RQ+   L GRDH+AYRS+Y PVK VID
Sbjct: 1183 VLLYTGISGTIGALVPFVSKEDVDTMTTLEMQLRQQSDSLVGRDHLAYRSSYAPVKHVID 1242

Query: 1173 GDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            GDLCE F  L    Q  +A ELDR P E+ KKL ++R
Sbjct: 1243 GDLCESFGLLPPAKQSAVAQELDRKPSEVNKKLAQLR 1279


>gi|46125735|ref|XP_387421.1| hypothetical protein FG07245.1 [Gibberella zeae PH-1]
          Length = 1208

 Score = 1181 bits (3054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1226 (48%), Positives = 827/1226 (67%), Gaps = 50/1226 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT +  A+ G F+GT+   I+   G  L LLRP+ S G++ TL+S ++FG
Sbjct: 7    MFLYSLTVQPPTNVTQAVLGQFAGTREQLIITGAGSQLSLLRPDPSQGKVITLLSHDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDY+++ SDSGRI I+EY P++N F ++H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSLAAFRLAGSNKDYLIIASDSGRITIIEYLPAQNRFQRLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYSNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE DQDSTGQA  E    L +YELDLGLNHV RKWS+PVD  A++L  VPG
Sbjct: 187  VFAALEIDYSEVDQDSTGQAMEELDTQLVYYELDLGLNHVVRKWSDPVDPTASILFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENITYRHSNQEAFRVAIPRRRGATEDPNRKRTIVSGIMHKLKGNTGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FK++++   D E      V  LK+KYFDT+PV +S+C+LKSG+L+ A+
Sbjct: 307  FFFLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKVKYFDTVPVASSLCILKSGFLYVAT 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN++ YQF+ +G  D ++E  S     + +  ++PV+F PR  +NL  +E + ++ P+
Sbjct: 367  QFGNYSFYQFEKLGDDDEELEFYSDDFPADPKASYEPVYFHPRPTENLALVESIPAMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T+CG GPRSS R+L+ GL V+E+  S+LPG+PSAVWT+K N +
Sbjct: 427  LDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWTLKLNRS 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P+LA  L+GDD L+QVHP GIRHI
Sbjct: 487  EQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G +NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGNVNEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D T+RILSLDP+  ++  SVQ++++ P SL      A
Sbjct: 606  TCLSLGDVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  ED +   ++L+L+ GL +GV  RTV+D +TG+L+D+R +FLG +  +LF V V G+
Sbjct: 660  IIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTVQGK 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   I +G F++TPL+Y  LE+  +FSS+QC EG+V + G +LR+F 
Sbjct: 720  TCVLGLSSRPWLGYADPITKG-FVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFN 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I+RLGET  + ++PL YTP++ V  P + L   IE D   L  E R         A  + 
Sbjct: 779  IDRLGETLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELR---------AQLLA 829

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
            + G      + NGD       L  E +GYPK  + +W SCI V+DP S     L  ++L+
Sbjct: 830  DPG------VVNGDSR----VLPPEDFGYPKG-TRRWASCINVIDPLSEEGQVLQTIDLE 878

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V F  +++ + L +GT K +   P R+   GY+HIYRF+E G+ LE +HK
Sbjct: 879  NNEAAVSAAIVPFSSQDNESFLVIGTGKDMVVNP-RSFSEGYLHIYRFLEGGRELEFIHK 937

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  PLAL  FQGR+L  +G  LR+YDLG +++LRK + ++    IVS+NT   RI V
Sbjct: 938  TKVEEPPLALLAFQGRVLVAVGTSLRIYDLGMRQMLRKSQAEVATQQIVSLNTQGSRIIV 997

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q+   +  Y+   N+L  F DD++ RW T    +D++++AG DKFGN++ VR P+  
Sbjct: 998  GDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKA 1057

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S+E +E+ +G  +   +  L+G P+++  +  F+  D+ TS+ KASLV GG E +++  +
Sbjct: 1058 SEEADEEQSGLHLINARDYLHGTPHRVSLMCHFYTQDIPTSITKASLVVGGQEVLLWSGI 1117

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            MG++G  + F SR+D DFF +LE H+R E PPL GRDH+ YR  Y PVK VIDGDLCE++
Sbjct: 1118 MGTIGVFIPFVSREDADFFQNLEQHLRTEDPPLAGRDHLMYRGYYAPVKGVIDGDLCERY 1177

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKL 1205
              L  D ++ IA ELDR+  EI +K+
Sbjct: 1178 NLLPNDKKQMIAGELDRSVREIERKI 1203


>gi|340520436|gb|EGR50672.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1212

 Score = 1181 bits (3054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/1231 (48%), Positives = 832/1231 (67%), Gaps = 48/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT ++ A+ G F+GTK   I+   G  L LLRP++S G++ T++S +IFG
Sbjct: 7    MFLYSLTIQPPTNVVQAVLGQFAGTKEQLIITGAGSRLALLRPDSSQGKVITVLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDY+++ +DSGRI I+EY P +N F K+H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSLAAFRLAGSNKDYLILATDSGRITIIEYLPKENRFSKLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASIEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+E DQDSTG+A  + +  L +YELDLGLNHV RKWSEPVD+ A++L  VPG
Sbjct: 187  VFAALEIDYTEVDQDSTGEALRDLETQLVYYELDLGLNHVVRKWSEPVDSTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   I+S   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRTIISGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FKVT++   D+E      V  LKIKYFDT+P  AS+C+LKSG+L+ AS
Sbjct: 307  FFFLLQTEDGDMFKVTIDMVEDDEGNTTGEVRRLKIKYFDTVPPAASLCILKSGFLYVAS 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN + YQF+ +G  D ++E +S    ++ +  + PV+F PR L+NLV +E + S+ P+
Sbjct: 367  QFGNFSFYQFEKLGDDDEELEFTSDDFPVDAQASYDPVYFYPRPLENLVLVESIPSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D +IANL  E+APQI+T+CG G RS+ R L+ GL ++E+  S+LPG+PSAVWT+K N N
Sbjct: 427  LDCKIANLTGEDAPQIYTICGNGARSTFRTLKHGLEINEIVSSELPGIPSAVWTLKLNRN 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P+LA  L+G+D L+QVHP GIRHI
Sbjct: 487  EQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G++N+W  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGQVNQWDAPQHRSIVAATTNAHQVAIALSSGEIVYFEMDDDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D T+RILSLDP+  ++  SVQ++++ P SL      A
Sbjct: 606  TCLSLGEVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  ED +   ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V GR
Sbjct: 660  IISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGR 719

Query: 705  AAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              +L LSSRPWLGY       F++TPL+Y  LE+  +F+S+QC EG+V + G  LR+F++
Sbjct: 720  TCVLGLSSRPWLGYADPITKTFVVTPLNYVDLEWGWNFTSEQCEEGIVGIQGQTLRIFSV 779

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            +RLG+T  ++++PL YTP++ V  P + L  +IE D   L+          C +      
Sbjct: 780  DRLGDTLIQSSIPLTYTPKKMVKHPDQPLFYVIEADNHTLSP-------ALCAQLLADPA 832

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQD 880
              NG+               L  E++G+P+  + +W SCI V+DP + +   L  ++L++
Sbjct: 833  RVNGDSKV------------LPPEEFGHPRG-NRRWASCISVVDPLAEDGQVLQRIDLEE 879

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S+  V F  +E+ T L VGT K +   P R+    ++HIYRF  +G+ L  +HKT
Sbjct: 880  NEAAVSLAIVTFASQENETFLVVGTGKDMVLNP-RSFSDAFVHIYRFERDGRGLVFIHKT 938

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +VE  P+A+  FQGR+L GIG +LR+YDLG ++LLRK + ++ P  IVS+N    RI VG
Sbjct: 939  KVEEPPMAMIPFQGRVLVGIGKMLRIYDLGMRQLLRKSQAEVAPQQIVSLNAQGSRIVVG 998

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+Q+   +  +++  N+L  F DD+V RW T +  +D++T AG DKFGNI+ VR PQ  S
Sbjct: 999  DVQQGITYVVFKQQTNKLIPFVDDTVARWTTCSTMVDYETTAGGDKFGNIFIVRAPQKAS 1058

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            +E +E+P G  +   +  L+G  ++++ +   +  D+ TS+ K SLV GG E +++  +M
Sbjct: 1059 EEADEEPAGLHLLNARSYLHGTSHRLDLMCHLYTQDIPTSITKTSLVVGGQEVLLWSGLM 1118

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G ++ F +R+D DFF  LE H+R E PPL GRDH+ YRS Y P+K VIDGDLCE++ 
Sbjct: 1119 GTIGVLIPFVTREDADFFQSLEQHLRAEDPPLAGRDHLMYRSYYAPMKGVIDGDLCERYA 1178

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1179 LLPNDKKQMIAGELDRSVREIERKISDIRTR 1209


>gi|358378986|gb|EHK16667.1| hypothetical protein TRIVIDRAFT_40938 [Trichoderma virens Gv29-8]
          Length = 1212

 Score = 1180 bits (3053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1231 (48%), Positives = 831/1231 (67%), Gaps = 48/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT ++ A+ G F+GTK   I+   G  L LLRP+ S G++ TL+S +IFG
Sbjct: 7    MFLYSLTIQPPTNVVQAVLGQFAGTKEQLIITGAGSRLALLRPDPSQGKVITLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDY+++ +DSGRI I+EY P +N F K+H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSLAAFRLAGSNKDYLILATDSGRITIIEYLPKENRFTKLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASIEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+EADQD+TG+A  E +  L +YELDLGLNHV RKWSEPVD+ A++L  VPG
Sbjct: 187  VFAALEMDYTEADQDATGEAMRELETQLVYYELDLGLNHVVRKWSEPVDSTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   I+S   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRTIISGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FKVT++   D+E      V  LKIKYFDT+P  AS+C+LKSG+L+ AS
Sbjct: 307  FFFLLQTEDGDMFKVTIDMVEDDEGNTTGEVRRLKIKYFDTVPAAASLCILKSGFLYVAS 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN + YQF+ +G  D ++E +S    ++ +  + PV+F PR L+NLV +E + S+ P+
Sbjct: 367  QFGNFSFYQFEKLGDDDEELEFTSDDFPVDAQASYNPVYFYPRPLENLVLVESIPSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T+CG G RS+ R L+ GL ++E+  S+LPG+PSAVWT+K N  
Sbjct: 427  LDCKVANLTNEDAPQIYTICGNGARSTFRTLKHGLEINEIVSSELPGIPSAVWTLKLNRT 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P+LA  L+GDD L+QVHP GIRHI
Sbjct: 487  EQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G++N+W  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGQVNQWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDDDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D T+RILSLDP+  ++  SVQ++++ P SL      A
Sbjct: 606  TCLSLGEVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  ED +   ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V G+
Sbjct: 660  IISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGK 719

Query: 705  AAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              +L LSSRPWLGY       F++TPL+Y  LE+  +F+S+QC EG+V + G  LR+F++
Sbjct: 720  TCVLGLSSRPWLGYADPITKTFVVTPLNYVDLEWGWNFTSEQCEEGIVGIQGQTLRIFSV 779

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            +RLG+T  ++++PL YTP++ V  P   L  +IE D   L     E   K   + A +  
Sbjct: 780  DRLGDTLIQSSIPLTYTPKKMVKHPDHPLFYVIEADNHTLAP---ELCAKLLADPARV-- 834

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQD 880
                      NGD +     L  E++G+P+  + +W SCI V+DP + +   L  ++L++
Sbjct: 835  ----------NGDTK----ILPAEEFGHPRG-NRRWASCISVVDPLAEDGQVLQRIDLEE 879

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S+  V F  +E+ T L VGT K +   P R+    ++HIYRF  +G+ L  +HKT
Sbjct: 880  NEAAVSVAIVTFASQENETFLVVGTGKDMVVNP-RSFSDAFVHIYRFERDGRGLVFIHKT 938

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +VE  P+A+  FQGR+L GIG  LR+YDLG ++LLRK + ++ P  I+S++T   RI VG
Sbjct: 939  KVEEPPMAMIPFQGRVLVGIGKTLRIYDLGMRQLLRKAQAEVAPQQIISLSTQGSRIVVG 998

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+Q+   +  Y++  N+L  F DD+V RW T    +D++T+AG DKFGNI+ VR PQ  S
Sbjct: 999  DVQQGITYAVYKQSTNKLIPFVDDTVARWTTCTTMVDYETVAGGDKFGNIFIVRSPQKAS 1058

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            +E +E+  G  +   +  L+G  ++++ +      D+ TS+ K SLV GG + +++  +M
Sbjct: 1059 EEADEEQAGLHLLNARDYLHGTSHRLDLMCHLFTQDIPTSIAKTSLVVGGQDVLLWSGLM 1118

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G ++ F +R+D DFF  LE HMR E PPL GRDH+ YRS Y P+K +IDGDLCE++ 
Sbjct: 1119 GTIGVLIPFITREDTDFFQSLEQHMRAEDPPLAGRDHLMYRSYYAPMKGIIDGDLCERYA 1178

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1179 LLPNDKKQMIAGELDRSVREIERKISDIRTR 1209


>gi|358391805|gb|EHK41209.1| hypothetical protein TRIATDRAFT_135379 [Trichoderma atroviride IMI
            206040]
          Length = 1212

 Score = 1178 bits (3047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1231 (48%), Positives = 836/1231 (67%), Gaps = 48/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT ++ A+ G F+GTK   I+   G  L LLRP+ S G++ TL+S +IFG
Sbjct: 7    MFLYSLTIQPPTNVVQAVLGQFAGTKEQLIITGAGSRLALLRPDPSQGKVITLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDY+++ +DSGRI I+EY P +N F ++H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSLAAFRLAGSNKDYLILATDSGRITIIEYLPRENRFSRLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA ++ + EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLVASIEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+E DQDSTG+A  E +  L +YELDLGLNHV RKWSEPVD+ A++L  VPG
Sbjct: 187  VFAALEIDYTEVDQDSTGEALRELETQLVYYELDLGLNHVVRKWSEPVDSTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRTIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FKVT++   D E      V  LKIKYFDT+P  +++C+LKSG+L+ AS
Sbjct: 307  FFFLLQTEDGDMFKVTIDMVEDEEGNTTGEVRRLKIKYFDTVPAASNLCILKSGFLYVAS 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN + YQF+ +G  D ++E +S    ++ +  + PV+F PR L+NLV +E + S+ P+
Sbjct: 367  QFGNFSFYQFEKLGDDDEELEFTSDDFPVDAQASYTPVYFYPRPLENLVLVESIPSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D +IANL  E+APQI+T+CG G RS+ R L+ GL ++E+  S+LPG+PSAVWT+K N +
Sbjct: 427  LDCKIANLTGEDAPQIYTVCGNGARSTFRTLKHGLEINEIVSSELPGIPSAVWTLKLNRS 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P+LA  L+GDD L+QVHP GIRHI
Sbjct: 487  EQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G++N+W  P  R+IV   +N  QV IALS GE++YFE+D  G L E  +K EM G V
Sbjct: 547  R-NGQVNQWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDDDGSLAEYDDKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D T+RILSLDP+  ++  SVQ++++ P SL      A
Sbjct: 606  TCLSLGEVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  ED +   ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V GR
Sbjct: 660  IISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGR 719

Query: 705  AAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              +L LSSRPWLGY       F++TPLSY  LE+  +F+S+QC EG+V + G  LR+F++
Sbjct: 720  TCVLGLSSRPWLGYADPITKSFVVTPLSYVDLEWGWNFTSEQCEEGIVGIQGQTLRIFSV 779

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            +RLG+T  + ++PL YTP++ V  P+  L  +IE D   L+    +   K   + A +  
Sbjct: 780  DRLGDTLIQNSIPLTYTPKKMVKHPEHPLFYVIEADNHTLSP---DLCAKLLADPARV-- 834

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQD 880
            NG+  +              LS E++G+P+  + +W SCI V+DP + +   L  ++L +
Sbjct: 835  NGDAKV--------------LSPEEFGHPRG-NRRWASCISVVDPLAEDGQALQKIDLDE 879

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S+  V F  +++ T L VGT K +   P R+    Y+HIYRF +EG+ L  +HKT
Sbjct: 880  NEAAVSLAIVTFASQDNETFLVVGTGKDMVVNP-RSFSDAYVHIYRFEQEGRGLVFIHKT 938

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +VE  P+A+  FQGR+L GIG +LR+YDLG ++LLRK + ++ P  I S++T  +RI VG
Sbjct: 939  KVEEPPMAIIPFQGRVLVGIGKILRIYDLGMRQLLRKTQAEVAPQLINSLSTQGNRIIVG 998

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+Q+   +  Y++  N+L  F DD+V RW T +  +D++T+AG DKFGNI+ VR PQ  S
Sbjct: 999  DVQQGITYVVYKQTTNKLIPFVDDTVARWTTCSTMVDYETVAGGDKFGNIFVVRSPQKAS 1058

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            +E +E+  G  +   +  L+G  ++++ +   +  D+ TS+ K SLV GG + +++  +M
Sbjct: 1059 EEADEEQAGLHLLNARDYLHGRSHRLDLMCHLYTQDIPTSITKTSLVVGGQDVLLWSGLM 1118

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G ++ F +R+D DFF  LE+H+R E PPL GRDH+ YRS Y PVK VIDGDLCE++ 
Sbjct: 1119 GTIGVLIPFVTREDTDFFQSLELHLRAEDPPLAGRDHLMYRSYYAPVKGVIDGDLCERYT 1178

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1179 LLPNDKKQMIAAELDRSVREIERKISDIRTR 1209


>gi|346971485|gb|EGY14937.1| pre-mRNA-splicing factor RSE1 [Verticillium dahliae VdLs.17]
          Length = 1230

 Score = 1177 bits (3044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/1250 (47%), Positives = 830/1250 (66%), Gaps = 68/1250 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT +  A+ G F+GT+   I+ A G  + L+RP+ + G++ T++S ++FG
Sbjct: 7    MFLYSLTVQPPTNVTLAVLGQFAGTREQHIITASGSRITLVRPDAAQGKVVTVLSHDVFG 66

Query: 60   AIRSLAQFRLTGSQK------------------DYIVVGSDSGRIVILEYNPSKNVFDKI 101
             IRS+A FR+ GS K                  +Y+++ +DSGRI I+EY P++N F ++
Sbjct: 67   IIRSMAAFRIAGSNKGKSLVVPRPFLPLPFRGFNYLILATDSGRIAIIEYLPAQNRFQRL 126

Query: 102  HQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHK 161
            H ETFGKSG RR+VPG++LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK
Sbjct: 127  HLETFGKSGIRRVVPGEFLACDPKGRACLIASLEKNKLVYVLNRNSQAELTISSPLEAHK 186

Query: 162  SHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR 221
                V S+  +D G+ NP+FAA+E DY+EADQD TGQAA + +  L +YELDLGLNHV R
Sbjct: 187  PGVHVLSMVALDVGYANPVFAALETDYTEADQDPTGQAALDVETQLVYYELDLGLNHVVR 246

Query: 222  KWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAER 279
            KWSEPVDN A++L  VPGG DGPSGVLVC E  + Y++      R  +PRR  A     R
Sbjct: 247  KWSEPVDNTASLLFQVPGGNDGPSGVLVCGEENITYRHSNQEAFRVPVPRRRGATEDPSR 306

Query: 280  GVLIVSAATHRQKT---LFFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTI 329
               IV+   H+ K     FFFLLQTE GD+FK+T++       +    V  LKIKYFDTI
Sbjct: 307  KRCIVAGVMHKLKGSAGAFFFLLQTEDGDLFKITIDMIEDRDGNPTGEVKRLKIKYFDTI 366

Query: 330  PVTASMCVLKSGYLFAASEFGNHALYQFQAIGAD-PDVEASSSTL-METEEGFQPVFFQP 387
            PV +S+C+LKSG+L+ AS+FGN+  YQF+ +G D  ++E SS     + ++ ++ VFF P
Sbjct: 367  PVASSLCILKSGFLYVASQFGNYQFYQFEKLGDDDEELEFSSDDFPTDPKQSYEAVFFHP 426

Query: 388  RGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAV 447
            R L+NL  +E ++S+ P++D ++ANL  E+APQI+T CG G RS+ RIL+ GL V+E+  
Sbjct: 427  RELENLALVESIDSMNPLIDCKVANLTGEDAPQIYTACGNGARSTFRILKHGLEVNEIVA 486

Query: 448  SQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVS 507
            S+LPG+PSAVWT+K +  D++DAYIV+SF NATLVLSIGETVEEV+DSGFL + P+LA  
Sbjct: 487  SELPGIPSAVWTLKLSRGDQYDAYIVLSFTNATLVLSIGETVEEVNDSGFLTSVPTLAAQ 546

Query: 508  LIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD 567
            L+G + L+QVHP GIRHIR +G++NEW  P  R+IV   +N  QV +ALS GE++YFE+D
Sbjct: 547  LLGGEGLIQVHPKGIRHIR-NGQVNEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMD 605

Query: 568  MTGQLLEV-EKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILS 626
              G L E  EK EM G V CL +  VPEGR RS FLAVG  D+T+R+LSLDP+  ++  S
Sbjct: 606  SDGSLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGCDDSTVRVLSLDPETTLESKS 665

Query: 627  VQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRS 686
            VQ++++PP SL      A +  ED +   ++L+L+ GL +GV  RTV+D VTG+L+D+R 
Sbjct: 666  VQALTAPPTSL------AVIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQ 719

Query: 687  RFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSD 743
            +FLG +P KLF V V GR  +L LSSRPWLGY   I +G F++TPL+Y  LE+  +FSS+
Sbjct: 720  KFLGPKPVKLFQVTVQGRTCVLGLSSRPWLGYADPITKG-FVVTPLNYVDLEWGWNFSSE 778

Query: 744  QCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT 803
            QC EGVV + G +LR+F IE+LG+T  + ++PL YTPRR V  P+  +   IE+D   L 
Sbjct: 779  QCEEGVVGIQGQSLRIFAIEKLGDTLTQKSIPLTYTPRRMVKHPEHPMFYTIESDNNTLP 838

Query: 804  AEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIR 863
             E R     +                 + NGD       L   ++GYP+A+  +W SCI 
Sbjct: 839  PELRAQLLAD---------------PSVVNGDART----LPPAEFGYPRAKG-RWASCIS 878

Query: 864  VLDPRSANTTCL--LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGY 921
            V+DP S     L  ++L +NEAA S   V F  +++ + L VGT K +   P R    GY
Sbjct: 879  VIDPLSEELQTLQTVDLDNNEAAVSAAIVPFTSQDNESFLVVGTGKDMIVNP-RQFTEGY 937

Query: 922  IHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
            IHIYRF E+G+ LE +HKT+VE  P AL  FQGRL+AG+G  LR+YDLG+K++LRK +  
Sbjct: 938  IHIYRFSEDGRELEFIHKTKVEEPPTALLAFQGRLVAGVGKTLRIYDLGQKQMLRKAQAD 997

Query: 982  LFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTM 1041
            + P  IVS++T   RI VGD+Q+   +  Y+   N+L  F DD+V RW+T    +D++++
Sbjct: 998  VAPQLIVSLSTQGSRIVVGDVQQGVTYVVYKPLSNKLIPFVDDTVARWMTCTTMVDYESV 1057

Query: 1042 AGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSL 1101
            AG DKFGNI+ VR P+  S E +E+  G  +   +  L+G P+++  +  F+  DV+TS+
Sbjct: 1058 AGGDKFGNIFIVRAPEKASQEADEEGAGLHLTNTRDYLHGTPHRLSLVSHFYSQDVLTSI 1117

Query: 1102 QKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
             K SLV GG + +++  + G++G  + F +R+D DFF  LE H+R E  PL GRDH+ YR
Sbjct: 1118 TKTSLVVGGQDVLLWSGISGTIGVFIPFVTREDADFFQTLEQHLRTEDAPLAGRDHLMYR 1177

Query: 1162 SAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              Y PVK VIDGDLCE++  L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1178 GYYAPVKGVIDGDLCERYTLLPNDKKQMIAGELDRSVREIERKISDIRTR 1227


>gi|322707263|gb|EFY98842.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
          Length = 1212

 Score = 1177 bits (3044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/1232 (48%), Positives = 824/1232 (66%), Gaps = 50/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q P  ++ A+ G F+GTK   I+   G  L LLRP+ S G++ T++S  +FG
Sbjct: 7    MFLYSLTVQPPNNVVQAVLGQFAGTKEQLIITGAGSQLTLLRPDPSLGKVTTVLSHNVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDY+++ SDSGRI ++EY P++N F ++H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSLAAFRLAGSNKDYLIIASDSGRITVVEYLPAQNRFSRLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR   A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASTEKNKLVYVLNRSAQAELTISSPLEAHKPGVLVISMVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE DQDS+GQA  E +  L +YELDLGLNHV RKWSEPVD  A++L  VPG
Sbjct: 187  VFAALEMDYSEVDQDSSGQALEEVETQLVYYELDLGLNHVVRKWSEPVDPTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEESITYRHSNQDAFRVPIPRRKGATEDPSRKRTIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FKVT++   D E      V  LKIKYFDT+PV  S+C+LKSG+L+ AS
Sbjct: 307  FFFLLQTEDGDLFKVTIDMVEDEEGSPTGEVKRLKIKYFDTVPVATSLCILKSGFLYIAS 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN + YQF+ +G  D ++E SS    ++ +  + PV+F PR  +NL  +E + S+ P+
Sbjct: 367  QFGNFSFYQFEKLGDDDAELEFSSDDFPVDPQASYDPVYFHPRPAENLALVESIPSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T+CG G RS+ R+LR GL V+E+  S+LPG+PSAVWT+K N  
Sbjct: 427  LDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIVASELPGIPSAVWTLKLNRG 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++DAYIV+SF N TLVLSIGETVEEVSDSGF  + P+LA  L+GDD L+QVHP GIRHI
Sbjct: 487  EQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFSTSVPTLAAQLLGDDGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G++NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGKVNEWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D T+RILSLDP+  ++  SVQ++++ P SL      A
Sbjct: 606  TCLSLGEVPEGRVRSSFLAVGCDDCTVRILSLDPESTLESKSVQALTAAPSSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  +D +   ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V G 
Sbjct: 660  IIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGT 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   I +G F++TPL+Y  LE+  +FSS+QC EGVV + G +LR+F+
Sbjct: 720  TCVLGLSSRPWLGYSDPITKG-FVVTPLNYVDLEWGWNFSSEQCEEGVVGIQGQSLRIFS 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I+RLG+T  + A+ L YTP++ +  P++ L   IE+D   L  + R         A  M 
Sbjct: 779  IDRLGDTLTQKAVSLTYTPKKLIKHPEQPLFYTIESDNNTLPPDLR---------AQLMA 829

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
            +        + NGD       L  E +GYPK  + +W SCI V+DP S     +  ++L+
Sbjct: 830  DPA------VVNGDATV----LPPEDFGYPKG-NRRWASCINVIDPVSEEPQVVQTVDLE 878

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V F  +++ + L VGT K +   P RN    YI++YRF EEG+ LE +HK
Sbjct: 879  NNEAAVSAAIVPFASQDNESFLIVGTGKDVVVNP-RNFSEAYIYVYRFQEEGRELEFIHK 937

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T++E   LAL  FQG+LLAG+G  LR+YDLG +++LRK + ++ P  IVS+NT   RI V
Sbjct: 938  TKIEEPALALIPFQGKLLAGVGKTLRVYDLGMRQMLRKAQAEVAPQQIVSLNTQGSRIIV 997

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GDIQ+   +  Y+   N+L  FADD++ RW T    +D++++AG DKFGN++ VR P   
Sbjct: 998  GDIQQGVTYVTYKPTTNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPPKA 1057

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S+E +E+ +G  +   +  L+G   +++ +  F+  D+ TS+ K SLV GG + +++  +
Sbjct: 1058 SEEADEEQSGLHLMNARDYLHGTSQRLDLMCHFYTQDIPTSMAKTSLVVGGQDVLLWSGL 1117

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            MG++G  +   SR+D DFF  LE H+R E PPL GRDH+ YRS Y PVK +IDGDLCE++
Sbjct: 1118 MGTIGVFIPLISREDADFFQSLESHLRTEDPPLAGRDHLMYRSYYAPVKGIIDGDLCERY 1177

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1178 TLLPNDKKQMIAGELDRSVREIERKISDIRTR 1209


>gi|302916981|ref|XP_003052301.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733240|gb|EEU46588.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1212

 Score = 1172 bits (3033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1232 (48%), Positives = 829/1232 (67%), Gaps = 50/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT ++ A+ G F+GT+   I+   G  L LLRP+ S G++ TL+S +IFG
Sbjct: 7    MFLYSLTVQPPTNVVQAVLGQFAGTREQLIITGAGSQLTLLRPDPSQGKVITLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDY+++ +DSGRI I+EY P++N F ++H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSLAAFRLAGSNKDYLILATDSGRITIIEYLPAQNRFQRLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYSNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE DQDS+GQA  + +  L +YELDLGLNHV R+WS+PVD  A++L  VPG
Sbjct: 187  VFAALEIDYSEVDQDSSGQAMEDLETQLVYYELDLGLNHVVRRWSDPVDPTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENITYRHSNQEAFRVAIPRRRGATEDPNRKRTIVSGIMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FK++++       +    V  LKIKYFDT+PV +S+C+LKSG+L+ AS
Sbjct: 307  FFFLLQTEDGDLFKLSIDMVEDEDGNPTGEVKRLKIKYFDTVPVASSLCILKSGFLYVAS 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN++ YQF+ +G  D ++E  S     +    + PV+F PR  +NL  +E + ++ P+
Sbjct: 367  QFGNYSFYQFEKLGDDDEELEFISDDFPADPRASYDPVYFHPRPTENLALVESIPAMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T+CG G RS+ R+L+ GL V+E+  S+LPG+PSAVWT+K N +
Sbjct: 427  LDCKVANLTGEDAPQIYTICGNGARSTFRMLKHGLEVNEIVASELPGIPSAVWTLKLNRS 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P+LA  L+G+D L+QVHP GIRH+
Sbjct: 487  EQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKGIRHV 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G INEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGHINEWAAPQHRSIVAASANAHQVAIALSSGEIVYFEMDADGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D T+RILSLDPD  ++  SVQ++++ P SL      A
Sbjct: 606  TCLSLGDVPEGRLRSSFLAVGCDDCTVRILSLDPDSTLENKSVQALTAAPTSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  ED +   ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V G+
Sbjct: 660  IIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKEVRLFQVTVQGK 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   I +G F++TPL+Y  LE+  +FSS+QC EG+V + G +LR+F 
Sbjct: 720  TCVLGLSSRPWLGYPDPITKG-FVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFN 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I+RLG+T  + ++PL YTP++ V  P++ L   IE D   L  E R          A + 
Sbjct: 779  IDRLGDTLIQKSIPLTYTPKKLVKHPEQPLFYTIEADNNTLPPELR----------AQLL 828

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
             + N     + NGD +     L  E +GYP+A + +W SCI V+DP S     L  +  +
Sbjct: 829  ADPN-----VVNGDSQ----VLPPEDFGYPRA-NRRWASCINVVDPLSEEGQVLQTVHFE 878

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V+F  +++   L VGT K +   P+ +   GY++IYRFVE+G+ LE +HK
Sbjct: 879  NNEAAVSATVVSFASQDNENFLVVGTGKDMIVNPQ-SYSEGYLYIYRFVEDGRELEFIHK 937

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T++E  PLAL  FQG++   +G  LR+YDLG +++LRK + ++    IVS+NT   RI V
Sbjct: 938  TKIEEPPLALLPFQGKVAVAVGTQLRIYDLGMRQMLRKAQAEVSAQRIVSLNTQGSRIVV 997

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q+      Y+   N+L  FADD+V RW T    +D++++AG DKFGN++ VR P+  
Sbjct: 998  GDVQQGVTLVVYKSATNKLIPFADDTVARWTTCTTMVDYESIAGGDKFGNMFIVRCPEKA 1057

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S+E +E+ +G  +   +  L+G P+++  +  F+  DV TS+ K SLV GG E +++  +
Sbjct: 1058 SEEADEEQSGLHLINARDYLHGTPHRLGLMCHFYTQDVPTSITKTSLVVGGQEILLWSGI 1117

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            MG++G  + F SR+D DFF +LE H+R E PPL GRDH+ YR  Y PVK VIDGDLCE++
Sbjct: 1118 MGTIGVFIPFVSREDADFFQNLEQHLRTEDPPLAGRDHLMYRGYYAPVKGVIDGDLCERY 1177

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1178 NLLPNDKKQMIAGELDRSVREIERKISDIRTR 1209


>gi|322693432|gb|EFY85292.1| Pre-mRNA-splicing factor RSE1 [Metarhizium acridum CQMa 102]
          Length = 1221

 Score = 1172 bits (3033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1233 (48%), Positives = 824/1233 (66%), Gaps = 50/1233 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q P  ++ A+ G F+GTK   I+   G  L LLRP+ S G++ T++S  +FG
Sbjct: 7    MFLYSLTVQPPNNVVQAVLGQFAGTKEQLIITGAGSQLTLLRPDPSLGKVTTVLSHNVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDY+++ SDSGRI I+EY P++N F ++H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSLAAFRLAGSNKDYLIIASDSGRITIVEYLPAQNRFSRLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR   A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASTEKNKLVYVLNRSAQAELTISSPLEAHKPGVLVISMVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYS+ DQDS+GQA  E +  L +YELDLGLNHV RKWSEPVD  A++L  VPG
Sbjct: 187  VFAALEMDYSDVDQDSSGQALEEVETQLVYYELDLGLNHVVRKWSEPVDPTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R  +IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEESITYRHSNQDAFRVPIPRRKGATEDPSRKRIIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FKVT++   D E      V  LKIKYFDT+PV  S+C+LKSG+L+ AS
Sbjct: 307  FFFLLQTEDGDLFKVTIDMVEDEEGSPTGEVRRLKIKYFDTVPVATSLCILKSGFLYIAS 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN + YQF+ +G  D ++E SS    ++ +  + PV+F PR  +NL  +E + S+ P+
Sbjct: 367  QFGNFSFYQFEKLGDDDEELEFSSDDFPVDPQASYDPVYFHPRPAENLALVESIPSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T+CG G RS+ R+LR GL V+E+  S+LPG+PSAVWT+K N  
Sbjct: 427  LDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIVASELPGIPSAVWTLKLNRG 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++DAYIV+SF N TLVLSIGETVEEVSDSGF  + P+LA  L+GDD L+QVHP GIRH+
Sbjct: 487  EQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFSTSVPTLAAQLLGDDGLIQVHPKGIRHV 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G++NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGKVNEWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D T+RILSLDP+  ++  SVQ++++ P SL      A
Sbjct: 606  TCLSLGEVPEGRARSSFLAVGCDDCTVRILSLDPESTLESKSVQALTAAPSSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  +D +   ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V G 
Sbjct: 660  IIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGT 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   I +G F++TPL+Y  LE+  +FSS+QC EG+V + G +LR+F+
Sbjct: 720  TCVLGLSSRPWLGYSDPITKG-FVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFS 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I+RLG+T  + A+ L YTP++ +  P++ L   IE+D   L  + R     +        
Sbjct: 779  IDRLGDTLTQKAISLTYTPKKLIKHPEQPLFYTIESDNNTLPPDLRAQLIAD-------- 830

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
                     + NGD +     L  E++GYPK  + +W SCI V+DP S     +  ++L+
Sbjct: 831  -------PAVVNGDTKV----LPPEEFGYPKG-NRRWASCINVIDPVSEEPQVVQTVDLE 878

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V F  +++ + L VGT K +   P RN    YI++YRF EEG+ LE +HK
Sbjct: 879  NNEAAVSAAIVPFASQDNESFLIVGTGKDIVVNP-RNFSEAYIYVYRFQEEGRELEFIHK 937

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T++E   LAL  FQG+LLAG+G  LR+YDLG +++LRK + ++ P  IVS+NT   RI V
Sbjct: 938  TKIEEPALALIPFQGKLLAGVGKTLRVYDLGMRQMLRKAQAEVAPQQIVSLNTQGSRIIV 997

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q+   +  Y+   N+L  FADD + RW+T    +D++++AG DKFGN++ VR P   
Sbjct: 998  GDVQQGVTYVTYKPTTNKLIPFADDIIARWITCTTMVDYESVAGGDKFGNMFIVRCPPKA 1057

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S+E +E+ +G  +   +  L+G   +++ +  F+  D+ TS+ K SLV GG + +++  +
Sbjct: 1058 SEEADEEQSGLHLMNARDYLHGTSQRLDLMCHFYTQDIPTSMAKTSLVVGGQDVLLWSGL 1117

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            MG++G  +   SR+D DFF  LE H+R E PPL GRDH+ YRS Y PVK +IDGDLCE++
Sbjct: 1118 MGTIGVFIPLISREDADFFQSLESHLRTEDPPLAGRDHLMYRSYYAPVKGIIDGDLCERY 1177

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
              L  D ++ IA ELDR+  EI +K+    +K+
Sbjct: 1178 TLLPNDKKQMIAGELDRSVREIERKISVSNSKL 1210


>gi|389638952|ref|XP_003717109.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
 gi|148887431|sp|Q52E49.2|RSE1_MAGO7 RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|351642928|gb|EHA50790.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
          Length = 1216

 Score = 1167 bits (3019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1236 (48%), Positives = 816/1236 (66%), Gaps = 54/1236 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSL++Q P+ I  AI G FSGTK  +IV A G  L L RP+   G++  L+S ++FG
Sbjct: 7    MFLYSLSIQPPSTITRAILGQFSGTKEQQIVAASGSRLTLYRPDPTQGKVVPLMSHDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR LA FRL GS KDY+++ SDSGRI I+EY P++N F +IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRDLASFRLAGSSKDYLIIASDSGRITIVEYLPAQNRFSRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + E+ KLVYVLNR++ A LTISSPLEAHK+ T+  S+  +D G+ NP
Sbjct: 127  LAADPKGRACLIASVERCKLVYVLNRNSQAELTISSPLEAHKNGTLTLSLVALDVGYSNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE DQD  G AA   +  L +YELDLGLNHV RKW + VD+ A+ML  VPG
Sbjct: 187  VFAALEVDYSEVDQDPKGDAAQNVETVLNYYELDLGLNHVVRKWFDVVDSTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKT---L 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GSDGPSGVLVCGEENITYRHSNQDAFRVPIPRRKGATEDPSRKRNIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FKVT++   D E      V  LKIKYFDTIPV+ ++C+LKSG+LF AS
Sbjct: 307  FFFLLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTIPVSNNLCILKSGFLFVAS 366

Query: 348  EFGNHALYQFQAIGAD-PDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D  ++E  SS   ++ +E ++PV+F PR  +NL  +E ++S+ P+
Sbjct: 367  EFGNHLFYQFEKLGDDDEELEFFSSDFPVDPKEPYEPVYFYPRPTENLALVESIDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            MD+++ANL EE+APQI+T+ G+G RS+ R+L+ GL V+E+  SQLPG PSAVWT K   +
Sbjct: 427  MDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEIVASQLPGTPSAVWTTKLRRD 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            DE+DAYIV+SF N TLVLSIGETVEEVSD+GFL + P+LAV  +GDD L+QVHP GIRHI
Sbjct: 487  DEYDAYIVLSFTNGTLVLSIGETVEEVSDTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G +NEW +P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGVVNEWSSPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEGR RS +LAVG  D T+RILSLDP+  ++  SVQ++++ P +L  + +  
Sbjct: 606  TSLSLGEVPEGRLRSSYLAVGCDDCTVRILSLDPESTLESKSVQALTAAPSALSIMSM-- 663

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
                ED +    +L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V  R
Sbjct: 664  ----EDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQKR 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSR WLG+   + +G F +TPL+YE LE+  +F S+QC EG+V V G  LR+F 
Sbjct: 720  TCVLALSSRSWLGFSDPVTKG-FTMTPLNYEELEWGWNFVSEQCEEGMVGVNGQFLRIFA 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+LG+   + ++PL YTPR+    P +++   IE D   L  E RE        AA   
Sbjct: 779  IEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFYTIEADNNTLAPELREQ-----LMAAPTA 833

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR------SANTTCL 875
             NG+  +              L  +++GYP+    +W SCI V+DP              
Sbjct: 834  VNGDARV--------------LPPDEFGYPRGNG-RWASCISVVDPLGDGEELEPGVVQR 878

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            ++L +NEAA S+  V+F  ++  + L VGT K +   P+R    GYIH+YRF E+G+ LE
Sbjct: 879  IDLDNNEAALSMAVVSFASQDGESFLVVGTGKDMVVNPRR-FTEGYIHVYRFSEDGRELE 937

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
             +HKT+VE  P AL  FQGRL+AGIG +LR+YDLG ++LLRK + ++ P  IVS+NT   
Sbjct: 938  FIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEVAPQLIVSLNTQGS 997

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            RI VGD+Q    +  Y+ + N+L  FADD++ RW T    +D+D+ AGADKFGN++ +R 
Sbjct: 998  RIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRC 1057

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
            P+  S E +E  +   +   +  L+G  N++  +   +  D+ TS+ K +LV GG E ++
Sbjct: 1058 PEKASQESDEPGSEVHLVHSRDYLHGTSNRLALMAHVYTQDIPTSICKTNLVVGGQEVLL 1117

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDL 1175
            +G   G++G ++ F SR+D DFF  LE H+R E PPL GRDH+ YR  Y PVK VIDGDL
Sbjct: 1118 WGGFQGTIGVLIPFVSREDADFFQSLEQHLRSEDPPLAGRDHLMYRGCYVPVKGVIDGDL 1177

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            CE++  L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1178 CERYTMLPNDKKQMIAGELDRSVREIERKISDIRTR 1213


>gi|400597418|gb|EJP65151.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
          Length = 1212

 Score = 1166 bits (3016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/1231 (48%), Positives = 826/1231 (67%), Gaps = 48/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT ++ A+ G F+GTK   I+   G  L +LRP+ + G++  L+S +IFG
Sbjct: 7    MFLYSLTIQPPTNVVQAVLGQFAGTKEQLIITGSGSQLTILRPDPAQGKVIPLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RS+A FRL GS KDYI++ +DSGRI +LEY PS N F ++H ETFGK+G RR+VPG+Y
Sbjct: 67   VLRSIAVFRLAGSSKDYIILATDSGRITVLEYLPSPNRFSRLHMETFGKTGIRRVVPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I A EK KLVYVLNR++ A LTISSPLEAHK   +V ++  +D G+ NP
Sbjct: 127  LACDPKGRACLISAVEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVIALTALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+E DQD+TG+A SE + +L +YELDLGLNHV RKWS+PVD  A++L  VPG
Sbjct: 187  VFAALEIDYTEVDQDNTGEALSEVETHLVYYELDLGLNHVVRKWSDPVDPTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  V Y++     +R  IPRR  A     R   IV+   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENVTYRHSNQDALRVPIPRRRGATEDPSRKRNIVAGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FK+T++   D E      V  +KIKYFDT+PV  S+C+LKSG+L+ AS
Sbjct: 307  FFFLLQTDDGDLFKITIDMVEDEEGAPTGEVQRMKIKYFDTVPVATSLCILKSGFLYVAS 366

Query: 348  EFGNHALYQFQAIGADPD-VEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN+A YQF+ +G D D +E SS    ++    ++PV+F PR  +NL  ++ + ++ P+
Sbjct: 367  QFGNYAFYQFEKLGDDDDELEFSSDDFPVDPLAAYEPVYFYPRPAENLALVDSIPAMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+++CG G RS+ R ++ GL V+E+  S+LPGVPSAVWT+K N +
Sbjct: 427  LDCKVANLTGEDAPQIYSICGNGARSTFRTIKHGLEVNEIVASELPGVPSAVWTLKLNSD 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++D YIV+SF N TLVLSIGETVEEVSDSGFL + P++A  L+G D L+QVHP GIRHI
Sbjct: 487  EQYDTYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTIAAQLLGTDGLIQVHPRGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G +NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGNVNEWSAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEGR RS FLAVG  D T+RILSLDP+  ++  SVQ++++ P SL  + +  
Sbjct: 606  TALSLGEVPEGRVRSSFLAVGCDDATVRILSLDPESTLENKSVQALTAAPTSLAIIPM-- 663

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
                +D +   ++L+L+ GL +GV  RTV+D +TG LSD+R +FLG +P +LF V VGGR
Sbjct: 664  ----DDSSSGGSTLYLHIGLHSGVYLRTVLDEITGDLSDTRQKFLGPKPVRLFQVSVGGR 719

Query: 705  AAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              +L LSSRPWLGY       F +TPL+Y  LE+  +FSS+QC +GVV + G +LR+F+I
Sbjct: 720  TCVLGLSSRPWLGYADPITNSFEITPLNYVDLEWGWNFSSEQCEDGVVGIQGQSLRIFSI 779

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            +RLGET  ++++PL YTP++FV  P + L   IE D   L  + +  AK     AA    
Sbjct: 780  DRLGETLIQSSIPLTYTPKKFVKHPSEPLFYTIEADNHTLPPDLQ--AKLLADPAA---V 834

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQD 880
            NG+  +              L  E++G+P+    +W SCI V+DP S   + L  ++ ++
Sbjct: 835  NGDAKV--------------LPPEEFGHPRGNR-RWASCISVVDPVSEEPSVLQKVDFEN 879

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S   V+F  +++ + L VGT K +   P R+    YI+IYRF E G+ LE +HKT
Sbjct: 880  NEAAVSAAVVSFASQDNESFLVVGTGKDMILNP-RSSSEAYIYIYRFQEGGRELEFIHKT 938

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            ++E   +AL  FQG+LLAGIG  LR+YDLG ++LLRK + ++ P  IVS+NT   RI VG
Sbjct: 939  KIEEPAMALLAFQGKLLAGIGKTLRMYDLGMRQLLRKAQAEVVPQQIVSLNTQGSRIVVG 998

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+Q+      Y+   N+L  FADD++ RW T    +D++++AG DKFGN++ VR P   S
Sbjct: 999  DVQQGVTLVVYKPASNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNMFIVRSPAKAS 1058

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            +E +E+  G  +   +  L+GA +++E +  F   DV TS+ K SLV GG + +++  +M
Sbjct: 1059 EEADEEQAGLHLVNARDYLHGAQHRLELMCHFFTQDVPTSINKTSLVVGGQDVLLWSGIM 1118

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G  + F SR+D DFF  LE H+R E  PL GRDH+ YRS Y PVK VIDGDLCE+F 
Sbjct: 1119 GTIGVFIPFVSREDADFFQSLEQHLRTEDAPLAGRDHLMYRSYYAPVKGVIDGDLCERFA 1178

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             L  D ++ +A ELDR+  EI +K+ +IR +
Sbjct: 1179 ALPNDKKQMMAGELDRSVREIERKISDIRTR 1209


>gi|336469942|gb|EGO58104.1| pre-mRNA splicing factor RSE1 [Neurospora tetrasperma FGSC 2508]
          Length = 1192

 Score = 1165 bits (3015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1232 (49%), Positives = 809/1232 (65%), Gaps = 70/1232 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLT+Q PT +  A+ G FSGTK  +I+ A G  L LL+P+   G++ TL+S +IFG
Sbjct: 7    MFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R++A FRL GS KDYI++ +DSGRI I+EY P  N F +IH ETFGKSG RR++PGQY
Sbjct: 67   IVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I A EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LAADPKGRACLISALEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+ELDY++ADQD TGQA  E +  L +YELDLGLNHV RKWS+ VD  +++L  VPG
Sbjct: 187  VFAALELDYTDADQDPTGQAREEVETQLVYYELDLGLNHVVRKWSDTVDRTSSLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKT---L 294
            G DGPSGVLVC E  V Y++      R  IPRR  A    +R  +IV+   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRSGATEDPQRKRVIVAGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FKVT++       +    V  LKIKYFDTIPV  S+C+LKSG+LFAAS
Sbjct: 307  FFFLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTIPVATSLCILKSGFLFAAS 366

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D +    SS    T+    + PV+F PR L+NLV +E ++S+ P 
Sbjct: 367  EFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESIDSMNPQ 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+++CG G RS+ R+L+ GL VSE+  S+LPG PSAVWT K    
Sbjct: 427  VDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTPSAVWTTKLTKY 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D                  IGETVEEVSDSGFL T P+LAV  +G+D L+QVHP GIRHI
Sbjct: 487  DH-----------------IGETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVHPKGIRHI 529

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
             + GR+NEW  P  R+IV   +N  QVVIALS GE++YFE+D  G L E  EK EMSG V
Sbjct: 530  VQ-GRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYDEKKEMSGTV 588

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEG KRS FLAVG  D T+RILSLDPD  +++ S+Q++++ P +L  + ++ 
Sbjct: 589  TSLSVGQVPEGLKRSSFLAVGCDDCTVRILSLDPDSTLEMKSIQALTAAPSALSIMSMED 648

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S GG       ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P KLF V V  +
Sbjct: 649  SFGG-------STLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQDQ 701

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   + +G F++TPLSY  LEY  +FSS+QC+EG+V +  N LR+F+
Sbjct: 702  PCVLALSSRPWLGYTDPLTKG-FMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRIFS 760

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+LG+   + ++PL YTP+  V  P++     IE+D   L  E R              
Sbjct: 761  IEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKL----------- 809

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
                  ++Q  NGD       L  E +GYP+A+  +W SCI ++DP S     L  ++L 
Sbjct: 810  ------LEQQSNGDATV----LPPEDFGYPRAKG-RWASCISIIDPISEEPRVLQRIDLD 858

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V F  +E  + L VGT K +   P R    GYIH+YRF E+G+ LE +HK
Sbjct: 859  NNEAAVSAAIVPFASQEGESFLVVGTGKDMVLDP-RQFTEGYIHVYRFHEDGRDLEFIHK 917

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  PLAL  FQGRLLAG+G  LR+YDLG K+LLRK +  + P  IVS+ +  +RI V
Sbjct: 918  TRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIV 977

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q+   +  Y+ + N+L  FADD++ RW T    +D++++AG DKFGNIY VR P+ V
Sbjct: 978  GDLQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERV 1037

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S E +E  +   +   +  L+G PN++   V F+  D+ TS+ K SLV GG + +++  +
Sbjct: 1038 SQETDEPGSEIHLMHARNYLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGL 1097

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G++G  + F SR+DVDFF +LE HMR E PPL GRDH+ YR  Y PVK VIDGDLCE+F
Sbjct: 1098 QGTVGVFIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGVIDGDLCERF 1157

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1158 SLLPNDKKQMIAGELDRSVREIERKISDIRTR 1189


>gi|164429062|ref|XP_957282.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
 gi|157072394|gb|EAA28046.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
          Length = 1192

 Score = 1165 bits (3014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1232 (49%), Positives = 809/1232 (65%), Gaps = 70/1232 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSLT+Q PT +  A+ G FSGTK  +I+ A G  L LL+P+   G++ TL+S +IFG
Sbjct: 7    MFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R++A FRL GS KDYI++ +DSGRI I+EY P  N F +IH ETFGKSG RR++PGQY
Sbjct: 67   IVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I A EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LAADPKGRACLISALEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+ELDY++ADQD TGQA  E +  L +YELDLGLNHV RKWS+ VD  +++L  VPG
Sbjct: 187  VFAALELDYTDADQDPTGQAREEVETQLVYYELDLGLNHVVRKWSDTVDRTSSLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKT---L 294
            G DGPSGVLVC E  V Y++      R  IPRR  A    +R  +IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRSGATEDPQRKRVIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FKVT++       +    V  LKIKYFDTIPV  S+C+LKSG+LFAAS
Sbjct: 307  FFFLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTIPVATSLCILKSGFLFAAS 366

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D +    SS    T+    + PV+F PR L+NLV +E ++S+ P 
Sbjct: 367  EFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESIDSMNPQ 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+++CG G RS+ R+L+ GL VSE+  S+LPG PSAVWT K    
Sbjct: 427  VDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTPSAVWTTKLTKY 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D                  IGETVEEVSDSGFL T P+LAV  +G+D L+QVHP GIRHI
Sbjct: 487  DH-----------------IGETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVHPKGIRHI 529

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
             + GR+NEW  P  R+IV   +N  QVVIALS GE++YFE+D  G L E  EK EMSG V
Sbjct: 530  VQ-GRVNEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYDEKKEMSGTV 588

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEG KRS FLAVG  D T+RILSLDPD  +++ S+Q++++ P +L  + ++ 
Sbjct: 589  TSLSVGQVPEGLKRSSFLAVGCDDCTVRILSLDPDSTLEMKSIQALTAAPSALSIMSMED 648

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S GG       ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P +LF V V  +
Sbjct: 649  SFGG-------STLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTRLFQVSVQDQ 701

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   + +G F++TPLSY  LEY  +FSS+QC+EG+V +  N LR+F+
Sbjct: 702  PCVLALSSRPWLGYTDPLTKG-FMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRIFS 760

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+LG+   + ++PL YTP+  V  P++     IE+D   L  E R              
Sbjct: 761  IEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKL----------- 809

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
                  ++Q  NGD       L  E +GYP+A+  +W SCI ++DP S     L  ++L 
Sbjct: 810  ------LEQQSNGDATV----LPPEDFGYPRAKG-RWASCISIIDPISEEPRVLQRIDLD 858

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V F  +E  + L VGT K +   P R    GYIH+YRF E+G+ LE +HK
Sbjct: 859  NNEAAVSAAIVPFASQEGESFLVVGTGKDMVLDP-RQFTEGYIHVYRFHEDGRDLEFIHK 917

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  PLAL  FQGRLLAG+G  LR+YDLG K+LLRK +  + P  IVS+ +  +RI V
Sbjct: 918  TRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSLQSQGNRIIV 977

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q+   +  Y+ + N+L  FADD++ RW T    +D++++AG DKFGNIY VR P+ V
Sbjct: 978  GDLQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERV 1037

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S E +E  +   +   +  L+G PN++   V F+  D+ TS+ K SLV GG + +++  +
Sbjct: 1038 SQETDEPGSEIHLMHARNYLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGL 1097

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G++G  + F SR+DVDFF +LE HMR E PPL GRDH+ YR  Y PVK VIDGDLCE+F
Sbjct: 1098 QGTVGVFIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGVIDGDLCERF 1157

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1158 SLLPNDKKQMIAGELDRSVREIERKISDIRTR 1189


>gi|346327528|gb|EGX97124.1| pre-mRNA splicing factor RSE1 [Cordyceps militaris CM01]
          Length = 1206

 Score = 1165 bits (3013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1231 (48%), Positives = 824/1231 (66%), Gaps = 48/1231 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT ++ A+ G F+GTK   I+   G  L LLRP+ + G++  L+S +IFG
Sbjct: 1    MFLYSLTIQPPTNVVQAVLGQFAGTKEQLIITGSGSQLTLLRPDPAQGKVIALLSHDIFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +RS+A FRL GS KDYI++ +DSGRI ILEY P  N F+++H ETFGKSG RR+VPG+Y
Sbjct: 61   ILRSIAVFRLAGSNKDYIILATDSGRITILEYLPGPNRFNRLHMETFGKSGIRRVVPGEY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I A EK KLVYVLNR++ A LTISSPLEAHK   +V ++  +D G+ NP
Sbjct: 121  LACDPKGRACLISAVEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVIAMVALDVGYANP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E++Y+E DQD TG+A SE +  L +YELDLGLNHV RKWS+PVD  A++L  VPG
Sbjct: 181  VFAALEIEYTEVDQDITGEALSEVETQLVYYELDLGLNHVVRKWSDPVDPTASLLFQVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++     +R  IPRR  A     R   IV+   H+ K     
Sbjct: 241  GNDGPSGVLVCGEENITYRHSNQDALRVPIPRRRGATEDPSRKRNIVAGVMHKLKGSAGA 300

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQ++ GD+FK+T++   D E      V  +KIKYFDT+PV  S+C+LKSG+L+ AS
Sbjct: 301  FFFLLQSDDGDLFKITIDMVEDEEGAPTGEVQRMKIKYFDTVPVATSLCILKSGFLYVAS 360

Query: 348  EFGNHALYQFQAIGADPD-VEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN+A YQF+ +G D D VE SS    ++    ++PV+F PR  +NL  ++ + ++ P+
Sbjct: 361  QFGNYAFYQFEKLGDDDDEVEFSSEDFPVDPLAAYEPVYFYPRLAENLALVDSIPAMNPL 420

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQIFT+CG G RS+ R L+ GL V+E+  S+LPGVPSAVWT+K N +
Sbjct: 421  LDCKVANLTGEDAPQIFTICGNGARSTFRTLKHGLEVNEIVASELPGVPSAVWTLKLNSD 480

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P++A  L+G D L+QVHP GIRHI
Sbjct: 481  EQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTIAAQLLGTDGLIQVHPRGIRHI 540

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G +NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK EM G V
Sbjct: 541  R-NGNVNEWSAPQHRSIVAASTNSHQVAIALSSGEIVYFEMDSDGSLAEYDEKKEMFGTV 599

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEGR RS FLAVG  D+T+RILSLDP+  ++  SVQ++++ P SL  + +  
Sbjct: 600  TALSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPESTLENKSVQALTAAPTSLAIIPM-- 657

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
                +D +   ++L+L+ GL +GV  RTV+D +TG+L+D+R +FLG +P +LF V VGGR
Sbjct: 658  ----DDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPVRLFQVTVGGR 713

Query: 705  AAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              +L LSSRPWLGY +     F +TPLSY  LE+  +FSS+QC +GVV + G +LR+F+I
Sbjct: 714  TCVLGLSSRPWLGYANPITSSFEITPLSYVDLEWGWNFSSEQCEDGVVGIQGQSLRIFSI 773

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            +RLGET  ++++PL YTP++FV  P + L   IE D   L  + +  AK     AA    
Sbjct: 774  DRLGETLLQSSIPLTYTPKKFVKHPDEPLFYTIEADNHTLPPDLQ--AKLLADPAA---V 828

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQD 880
            NG+  +              L  E +G+P+    +W SCI V+DP S   + L  ++ ++
Sbjct: 829  NGDAKV--------------LPPEDFGHPRGNR-RWASCISVVDPVSEEPSVLQRVDFEN 873

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA S+  V+F  +++ + L VGT K +   P R+    YI+IYRF + G+ LE +HKT
Sbjct: 874  NEAAVSVAVVSFASQDNESFLVVGTGKDIVLNP-RSSSEAYIYIYRFQQGGRELEFIHKT 932

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            ++E    AL  FQG+LLAGIG  LR+YDLG ++LLRK + ++ P  IVS+NT   RI V 
Sbjct: 933  KIEEPATALLPFQGKLLAGIGKTLRMYDLGMRQLLRKAQAEVVPQQIVSLNTQGSRIVVS 992

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+Q+      Y+   N+L  F DDS+ RW T    +D++++AG DKFGN++ VR P   S
Sbjct: 993  DVQQGVTLVVYKSASNKLIPFVDDSIARWSTCTTMVDYESVAGGDKFGNMFIVRSPAKAS 1052

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            +E +ED  G  +   +  L+G  +++E +  F   D++TS+ K  LV GG + +++  +M
Sbjct: 1053 EEADEDAAGLHLVNARDYLHGTQHRLELMCHFFTQDILTSINKTGLVVGGQDVLLWSGIM 1112

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++G  + F SR+D DFF  LE H+R E  PL GRDH+ YRS Y PVK VIDGDLCE+F 
Sbjct: 1113 GTIGVFIPFVSREDTDFFQSLEQHLRTEDGPLAGRDHLMYRSYYAPVKGVIDGDLCERFS 1172

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1173 ILPNDKKQMIAGELDRSVREIERKISDIRAR 1203


>gi|440478305|gb|ELQ59147.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae P131]
          Length = 1223

 Score = 1162 bits (3006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1230 (48%), Positives = 812/1230 (66%), Gaps = 54/1230 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSL++Q P+ I  AI G FSGTK  +IV A G  L L RP+   G++  L+S ++FG
Sbjct: 7    MFLYSLSIQPPSTITRAILGQFSGTKEQQIVAASGSRLTLYRPDPTQGKVVPLMSHDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR LA FRL GS KDY+++ SDSGRI I+EY P++N F +IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRDLASFRLAGSSKDYLIIASDSGRITIVEYLPAQNRFSRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + E+ KLVYVLNR++ A LTISSPLEAHK+ T+  S+  +D G+ NP
Sbjct: 127  LAADPKGRACLIASVERCKLVYVLNRNSQAELTISSPLEAHKNGTLTLSLVALDVGYSNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE DQD  G AA   +  L +YELDLGLNHV RKW + VD+ A+ML  VPG
Sbjct: 187  VFAALEVDYSEVDQDPKGDAAQNVETVLNYYELDLGLNHVVRKWFDVVDSTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKT---L 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GSDGPSGVLVCGEENITYRHSNQDAFRVPIPRRKGATEDPSRKRNIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FKVT++   D E      V  LKIKYFDTIPV+ ++C+LKSG+LF AS
Sbjct: 307  FFFLLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTIPVSNNLCILKSGFLFVAS 366

Query: 348  EFGNHALYQFQAIGAD-PDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D  ++E  SS   ++ +E ++PV+F PR  +NL  +E ++S+ P+
Sbjct: 367  EFGNHLFYQFEKLGDDDEELEFFSSDFPVDPKEPYEPVYFYPRPTENLALVESIDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            MD+++ANL EE+APQI+T+ G+G RS+ R+L+ GL V+E+  SQLPG PSAVWT K   +
Sbjct: 427  MDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEIVASQLPGTPSAVWTTKLRRD 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            DE+DAYIV+SF N TLVLSIGETVEEVSD+GFL + P+LAV  +GDD L+QVHP GIRHI
Sbjct: 487  DEYDAYIVLSFTNGTLVLSIGETVEEVSDTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G +NEW +P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGVVNEWSSPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEGR RS +LAVG  D T+RILSLDP+  ++  SVQ++++ P +L  + +  
Sbjct: 606  TSLSLGEVPEGRLRSSYLAVGCDDCTVRILSLDPESTLESKSVQALTAAPSALSIMSM-- 663

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
                ED +    +L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V  R
Sbjct: 664  ----EDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQKR 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSR WLG+   + +G F +TPL+YE LE+  +F S+QC EG+V V G  LR+F 
Sbjct: 720  TCVLALSSRSWLGFSDPVTKG-FTMTPLNYEELEWGWNFVSEQCEEGMVGVNGQFLRIFA 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+LG+   + ++PL YTPR+    P +++   IE D   L  E RE        AA   
Sbjct: 779  IEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFYTIEADNNTLAPELREQ-----LMAAPTA 833

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR------SANTTCL 875
             NG+  +              L  +++GYP+    +W SCI V+DP              
Sbjct: 834  VNGDARV--------------LPPDEFGYPRGNG-RWASCISVVDPLGDGEELEPGVVQR 878

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            ++L +NEAA S+  V+F  ++  + L VGT K +   P+R    GYIH+YRF E+G+ LE
Sbjct: 879  IDLDNNEAALSMAVVSFASQDGESFLVVGTGKDMVVNPRR-FTEGYIHVYRFSEDGRELE 937

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
             +HKT+VE  P AL  FQGRL+AGIG +LR+YDLG ++LLRK + ++ P  IVS+NT   
Sbjct: 938  FIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEVAPQLIVSLNTQGS 997

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            RI VGD+Q    +  Y+ + N+L  FADD++ RW T    +D+D+ AGADKFGN++ +R 
Sbjct: 998  RIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRC 1057

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
            P+  S E +E  +   +   +  L+G  N++  +   +  D+ TS+ K +LV GG E ++
Sbjct: 1058 PEKASQESDEPGSEVHLVHSRDYLHGTSNRLALMAHVYTQDIPTSICKTNLVVGGQEVLL 1117

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDL 1175
            +G   G++G ++ F SR+D DFF  LE H+R E PPL GRDH+ YR  Y PVK VIDGDL
Sbjct: 1118 WGGFQGTIGVLIPFVSREDADFFQSLEQHLRSEDPPLAGRDHLMYRGCYVPVKGVIDGDL 1177

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKL 1205
            CE++  L  D ++ IA ELDR+  EI +K+
Sbjct: 1178 CERYTMLPNDKKQMIAGELDRSVREIERKI 1207


>gi|440473070|gb|ELQ41892.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae Y34]
          Length = 1229

 Score = 1161 bits (3004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1230 (48%), Positives = 812/1230 (66%), Gaps = 54/1230 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LYSL++Q P+ I  AI G FSGTK  +IV A G  L L RP+   G++  L+S ++FG
Sbjct: 7    MFLYSLSIQPPSTITRAILGQFSGTKEQQIVAASGSRLTLYRPDPTQGKVVPLMSHDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR LA FRL GS KDY+++ SDSGRI I+EY P++N F +IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRDLASFRLAGSSKDYLIIASDSGRITIVEYLPAQNRFSRIHLETFGKSGVRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + E+ KLVYVLNR++ A LTISSPLEAHK+ T+  S+  +D G+ NP
Sbjct: 127  LAADPKGRACLIASVERCKLVYVLNRNSQAELTISSPLEAHKNGTLTLSLVALDVGYSNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE DQD  G AA   +  L +YELDLGLNHV RKW + VD+ A+ML  VPG
Sbjct: 187  VFAALEVDYSEVDQDPKGDAAQNVETVLNYYELDLGLNHVVRKWFDVVDSTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKT---L 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GSDGPSGVLVCGEENITYRHSNQDAFRVPIPRRKGATEDPSRKRNIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FKVT++   D E      V  LKIKYFDTIPV+ ++C+LKSG+LF AS
Sbjct: 307  FFFLLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTIPVSNNLCILKSGFLFVAS 366

Query: 348  EFGNHALYQFQAIGAD-PDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D  ++E  SS   ++ +E ++PV+F PR  +NL  +E ++S+ P+
Sbjct: 367  EFGNHLFYQFEKLGDDDEELEFFSSDFPVDPKEPYEPVYFYPRPTENLALVESIDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            MD+++ANL EE+APQI+T+ G+G RS+ R+L+ GL V+E+  SQLPG PSAVWT K   +
Sbjct: 427  MDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEIVASQLPGTPSAVWTTKLRRD 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            DE+DAYIV+SF N TLVLSIGETVEEVSD+GFL + P+LAV  +GDD L+QVHP GIRHI
Sbjct: 487  DEYDAYIVLSFTNGTLVLSIGETVEEVSDTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G +NEW +P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGVVNEWSSPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEGR RS +LAVG  D T+RILSLDP+  ++  SVQ++++ P +L  + +  
Sbjct: 606  TSLSLGEVPEGRLRSSYLAVGCDDCTVRILSLDPESTLESKSVQALTAAPSALSIMSM-- 663

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
                ED +    +L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V  R
Sbjct: 664  ----EDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQKR 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSR WLG+   + +G F +TPL+YE LE+  +F S+QC EG+V V G  LR+F 
Sbjct: 720  TCVLALSSRSWLGFSDPVTKG-FTMTPLNYEELEWGWNFVSEQCEEGMVGVNGQFLRIFA 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+LG+   + ++PL YTPR+    P +++   IE D   L  E RE        AA   
Sbjct: 779  IEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFYTIEADNNTLAPELREQ-----LMAAPTA 833

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS------ANTTCL 875
             NG+  +              L  +++GYP+    +W SCI V+DP              
Sbjct: 834  VNGDARV--------------LPPDEFGYPRGNG-RWASCISVVDPLGDGEELEPGVVQR 878

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            ++L +NEAA S+  V+F  ++  + L VGT K +   P+R    GYIH+YRF E+G+ LE
Sbjct: 879  IDLDNNEAALSMAVVSFASQDGESFLVVGTGKDMVVNPRR-FTEGYIHVYRFSEDGRELE 937

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
             +HKT+VE  P AL  FQGRL+AGIG +LR+YDLG ++LLRK + ++ P  IVS+NT   
Sbjct: 938  FIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLRQLLRKAQAEVAPQLIVSLNTQGS 997

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            RI VGD+Q    +  Y+ + N+L  FADD++ RW T    +D+D+ AGADKFGN++ +R 
Sbjct: 998  RIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRC 1057

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
            P+  S E +E  +   +   +  L+G  N++  +   +  D+ TS+ K +LV GG E ++
Sbjct: 1058 PEKASQESDEPGSEVHLVHSRDYLHGTSNRLALMAHVYTQDIPTSICKTNLVVGGQEVLL 1117

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDL 1175
            +G   G++G ++ F SR+D DFF  LE H+R E PPL GRDH+ YR  Y PVK VIDGDL
Sbjct: 1118 WGGFQGTIGVLIPFVSREDADFFQSLEQHLRSEDPPLAGRDHLMYRGCYVPVKGVIDGDL 1177

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKL 1205
            CE++  L  D ++ IA ELDR+  EI +K+
Sbjct: 1178 CERYTMLPNDKKQMIAGELDRSVREIERKI 1207


>gi|320587625|gb|EFX00100.1| nuclear mRNA splicing factor protein [Grosmannia clavigera kw1407]
          Length = 1220

 Score = 1160 bits (3001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1225 (49%), Positives = 819/1225 (66%), Gaps = 48/1225 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLTLQ PT I  AI G FSGTK  +I+ A G  L LLRP+ S G++ TL++ ++FG
Sbjct: 8    MFLYSLTLQPPTNINQAILGQFSGTKEQQILTASGSRLSLLRPDPSQGKVITLLTHDVFG 67

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+A FRL GS KDY+++ +DSGRI I+EY P+ N F +IH ETFGKSG RR+VPGQY
Sbjct: 68   IIRSIAAFRLAGSNKDYVILATDSGRITIIEYIPADNRFQRIHLETFGKSGVRRVVPGQY 127

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR+  A LTISSPLEAHK   IV S+  +D G+ NP
Sbjct: 128  LAADPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHKPGVIVISLVALDVGYANP 187

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+ELDY+E+DQD TG+A  EA+  L +YELDLGLNHV R+WS+ VD+ A+ML  VPG
Sbjct: 188  VFAALELDYAESDQDPTGEAYREAETLLVYYELDLGLNHVVRRWSDTVDSTASMLFQVPG 247

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 248  GSDGPSGVLVCGEENITYRHSNQEAYRVPIPRRRGATEDPNRKRTIVSGVMHKLKGSAGA 307

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+ K+TL+   D++      V  LKIKYFDTIPV +S+C+LKSG+LF+AS
Sbjct: 308  FFFLLQTEDGDLLKLTLDMVEDDDGNPTGEVLRLKIKYFDTIPVASSLCILKSGFLFSAS 367

Query: 348  EFGNHALYQFQAIGADPD-VEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D D +E SS     E +  ++PV+F PR  +NL  +E +ES+ P+
Sbjct: 368  EFGNHQFYQFEKLGDDDDELEFSSDNFPHEPKAPYEPVYFYPRPAENLALVESIESMNPM 427

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL +++ PQI+++CG G RS+ R+L+  L V+E+  SQLPG P+AVWT K   +
Sbjct: 428  LDCKVANLTDDDVPQIYSVCGNGARSTFRMLKHALEVNEIVASQLPGTPTAVWTTKVRRD 487

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +E+DA+IV+SFNN TLVLSIGETVEEV+D+GFL + P+LAV  +GDD L+QVHP GIRHI
Sbjct: 488  EEYDAFIVLSFNNGTLVLSIGETVEEVTDTGFLSSVPTLAVQQLGDDGLIQVHPKGIRHI 547

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R DGR+NEW  P  R+IV   +N  QVV+ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 548  R-DGRVNEWAAPQHRSIVAAATNERQVVVALSSGEIVYFEMDTDGSLAEYDEKKEMFGTV 606

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL + +VPEGR RS +LAVG  D T+RILSLDP+  +  +S+Q++++ P SLL + +  
Sbjct: 607  TCLSLGAVPEGRLRSSYLAVGCDDCTVRILSLDPETTLDNMSIQALTAAPSSLLIMAMDD 666

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
            S  G        +L+L+ GL +GV  RTV+D VTG+L+D+R RFLG +  +LF V V  R
Sbjct: 667  SSAGG------TALYLHIGLHSGVYLRTVLDEVTGELTDTRQRFLGPKLVRLFQVSVQRR 720

Query: 705  AAMLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              +L LSSRPWLGY       F +T L Y  LE+  +FSS+QC EG+V + GN LR+F+I
Sbjct: 721  VCVLALSSRPWLGYDDSKAKNFAMTRLDYSELEWGWNFSSEQCEEGMVGIHGNFLRIFSI 780

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+LG+   + + PL YTPRR V  P+  +   IE D   L+ + R    ++  EA G+  
Sbjct: 781  EKLGDALIQKSFPLTYTPRRLVKHPEFGIFYTIEADNNTLSPDLR----RQLIEAPGV-T 835

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP--RSANTTCLLELQD 880
            NG+ ++              L  E +GYP+    +W SCI V+DP       T  +EL+ 
Sbjct: 836  NGDASV--------------LPPEDFGYPRGNG-RWASCISVVDPVGEDPGVTQTIELEG 880

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA  +   +F  +   + L VGT + +   P R    GYIH YRFV++G  LEL+HKT
Sbjct: 881  NEAAVCMAVASFVSRGGESYLIVGTGRNMILSP-RQFSEGYIHAYRFVKDGTQLELVHKT 939

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            +VE  P AL  FQGR+L GIG VLR+YDLG K++LRK ++++    IVS+ T   R+ VG
Sbjct: 940  KVEEPPTALLAFQGRILVGIGNVLRIYDLGIKQMLRKAQSEVSSKLIVSLQTQGSRVVVG 999

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D++E   +  Y+ + N+L  F DD++ RW T    +D+ ++AG DKFGN++ +R+    S
Sbjct: 1000 DVEEGVTYVVYKPEINKLLPFVDDTIKRWTTCTTMVDYQSVAGGDKFGNLWILRVSDKAS 1059

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
             + +E  +  ++   +G L+GAPN++  +   +  DV  S+ KASLV GG E +++  + 
Sbjct: 1060 QDADEPGSELQLVHARGYLHGAPNRLALMAHVYTQDVPMSICKASLVVGGQEVLVWSGLQ 1119

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++GA++ F SRDD DFF +LE HMRQE  PL GRDH+ YRS Y PVK VIDGDLCE+F 
Sbjct: 1120 GTVGALVPFVSRDDADFFQNLETHMRQEDAPLAGRDHLMYRSYYVPVKGVIDGDLCERFN 1179

Query: 1181 TLSLDLQRKIADELDRTPGEILKKL 1205
             L  + ++ IA ELDR+  EI +K+
Sbjct: 1180 LLPREKKQMIAGELDRSVREIERKI 1204


>gi|402077250|gb|EJT72599.1| pre-mRNA-splicing factor RSE1 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1216

 Score = 1157 bits (2993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1236 (48%), Positives = 813/1236 (65%), Gaps = 54/1236 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q P+ I  AI G F+GTK  +IV A G  L LLRP+ + G+I  ++S ++FG
Sbjct: 7    MFMYSLTIQPPSNINIAILGQFTGTKEQQIVTASGSRLTLLRPDPTLGKILPIISQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR LA FRL GS KDYI++ SDSGRI I+EY P+KN F +IH ETFGKSG RR++PGQY
Sbjct: 67   IIRDLASFRLAGSNKDYIIIASDSGRITIIEYLPAKNRFHRIHLETFGKSGVRRVIPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + E+ KLVYVLNR++ A LTISSPLEAHK+ T+  S+  +D G+ NP
Sbjct: 127  LAADPKGRACLIASVERCKLVYVLNRNSQAELTISSPLEAHKNGTLTLSLVALDVGYSNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY++ADQDS   A    +  L +YELDLGLNHV RKW + VD  ANML  VPG
Sbjct: 187  VFAALEIDYTDADQDSKSDATQNVETVLNYYELDLGLNHVVRKWFDVVDPTANMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKT---L 294
            G DGPSGVLVC +  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GSDGPSGVLVCGQENITYRHSNQDAFRVPIPRRKGATEDPNRKRNIVSGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FKVT++   D E      V  LKIKYFDTIPV++++C+LKSG+LF AS
Sbjct: 307  FFFLLQTEDGDLFKVTIDMLEDAEGNTTGEVQRLKIKYFDTIPVSSNLCILKSGFLFVAS 366

Query: 348  EFGNHALYQFQAIGAD-PDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            EFGNH  YQF+ +G D  ++E SS     +  E ++P +F PR  +NL  +E VES+ P+
Sbjct: 367  EFGNHHFYQFEKLGDDDEELEFSSENFPSDPAEPYEPAYFYPRPTENLALVESVESMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            MD+++ANL +E+APQI+T+ G G RS+ R+L+ GL V+E+  SQLPG PSAVWT K   +
Sbjct: 427  MDLKVANLTDEDAPQIYTVSGNGARSTFRMLKHGLEVNEIVASQLPGTPSAVWTTKIARD 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D++D+YIV+SF N TLVLSIGETVEEVSD+GFL +  +LAV  +G+D L+QVHP GIRHI
Sbjct: 487  DQYDSYIVLSFTNGTLVLSIGETVEEVSDTGFLSSVSTLAVQQLGEDGLVQVHPRGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R  G +NEW TP  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ EMSG V
Sbjct: 547  RS-GVVNEWPTPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDERKEMSGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
              L +  VPEGR RS FLAVG  D T+RILSLDP+  ++  SVQ++++ P +L  + +  
Sbjct: 606  TSLSLGEVPEGRLRSSFLAVGCDDCTVRILSLDPETTLESKSVQALTAAPSALSIMAM-- 663

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
                ED +    +L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V G 
Sbjct: 664  ----EDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQGM 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSR WLGY   I +G F +TPLSYE LE+A +F S+QC EG+V V G  LR+  
Sbjct: 720  TCVLALSSRSWLGYSDPISKG-FTMTPLSYEELEWAWNFRSEQCEEGMVGVQGQFLRICA 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I +LG++  + ++ L YTP++ +  P   +   IE +   L  E RE        AA   
Sbjct: 779  IGKLGDSMIQKSISLAYTPKKLIKNPTHPIFYTIEAENNTLPPELREQ-----LLAAPTA 833

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP------RSANTTCL 875
             NG+  +              L  E++GYP+    +W SCI V+DP      R  +    
Sbjct: 834  VNGDTKV--------------LPPEEFGYPRGNG-RWASCISVVDPLGDGEEREPSVLQQ 878

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            + L++NEA  S+  V F  ++  + L VGT K +   P R    GYIH+YRF+E+G+ LE
Sbjct: 879  IHLENNEATVSVAVVPFASQDSESFLVVGTGKDMVLNP-RCFTEGYIHVYRFLEDGRELE 937

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
             +HKT+VE  P+AL  FQG+L+AG+G  LR+YDLG ++LLRK ++++ P  IVS+ T   
Sbjct: 938  FIHKTKVEEPPMALLAFQGKLVAGVGRSLRIYDLGLRQLLRKAQSEVAPRVIVSLQTQGS 997

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            RI VGD Q    +  Y+++ N+L  FADDS+ RW T +  +D+++ AG DKFGNI+ +R 
Sbjct: 998  RIVVGDSQHGLIYVAYKQEANKLIAFADDSIQRWTTCSTMVDYESTAGGDKFGNIWILRC 1057

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
            P+  S E ++  +   +   +  L+G  N++  +   +  D+ TS+ K +LV GG E ++
Sbjct: 1058 PEKASQEADQPGSEVHLMHARDYLHGTSNRLALMAHVYTQDIATSICKTNLVVGGQEVLL 1117

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDL 1175
            +G + G++G ++ F SR+D DFF  LE HMR E PPL GRDH+ YRS Y PVK VIDGDL
Sbjct: 1118 WGGIQGTIGVLIPFVSREDADFFQTLEQHMRSEDPPLAGRDHLMYRSYYVPVKGVIDGDL 1177

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            CE+F  L  D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 1178 CERFTMLPNDKKQMIAGELDRSVREIERKISDIRTR 1213


>gi|315053737|ref|XP_003176243.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
 gi|311338089|gb|EFQ97291.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
          Length = 1181

 Score = 1156 bits (2990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/1222 (49%), Positives = 794/1222 (64%), Gaps = 79/1222 (6%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M++YSLT+Q PT I  AI G FSGTK  +IV A G  L + R E S G+++TL S ++FG
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGAKLAIHRTEPSQGKVQTLFSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDYI++GSDSGRI I+EY P++N F++IH ETFGKSG RR+VPGQY
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIVEYVPAQNRFNRIHLETFGKSGIRRVVPGQY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  T+V+++  +D G++NP
Sbjct: 127  LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++Y+E DQD TGQA  + +K L +YELDLGLNHV R+W++PVD  A+ML  VPG
Sbjct: 187  IFAALEVEYTEVDQDPTGQAYDDTEKMLVYYELDLGLNHVVRRWADPVDRTASMLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFF 296
            G DGPSGVLVCAE+ ++Y++      R  IPRR    + P ER   I +   H+ +  FF
Sbjct: 247  GADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENP-ERKRCITAGVMHKMRGAFF 305

Query: 297  FLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            FLLQ+E GD+FKVT+   E +NE+    V  LK+KYFDT+P+ +S+C+LKSG+LF ASE 
Sbjct: 306  FLLQSEDGDLFKVTMEMVEDENENATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365

Query: 350  GNHALYQFQAIGADPD-VEASSSTLMET-EEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
            GN   YQF+ +G D D +E  S        E   PV+F+PR  +NL  +E + SL P+M 
Sbjct: 366  GNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
              + N+ EE+APQI+TLCG G RSS R L+ GL VSE+  S+LP VPSAVWT K + ND+
Sbjct: 426  ASVTNVTEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQ 485

Query: 468  FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
            +DAYIV+SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  
Sbjct: 486  YDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 545

Query: 528  DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVAC 586
            D R+NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK +MSG V C
Sbjct: 546  DQRVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTC 605

Query: 587  LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
            L +  VP+                      D  D   +  +  V                
Sbjct: 606  LSLGEVPK----------------------DDVDFCPVCPIHHV---------------- 627

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
               D       + L+ GL +G+  RTV+D VTG+LSD+R+RFLG++P KLFSV V  + A
Sbjct: 628  --HDRFTLRVDVILHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 685

Query: 707  MLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
            +L LSSR WLGY  +    F LTPL+Y  LE++ +FSS+QCVEG+V + G  LR+F+IE+
Sbjct: 686  VLALSSRSWLGYSDLQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEK 745

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
            L     +  +PL YTPR FV  P+  L  +I +D   L+   +         A  +GE+ 
Sbjct: 746  LDNNLLQEPIPLAYTPRNFVRHPEYPLFYVIGSDNNVLSPSTK---------AKLLGEST 796

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLELQDNEA 883
              N D  E          L  E +GYP+  ++ W SCI V+DP  + +    LEL+DNEA
Sbjct: 797  AVNGDSAE----------LPPEDFGYPRG-TNHWASCIEVVDPINTKSVLSKLELEDNEA 845

Query: 884  AFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE 943
            A SI  V+F  +E  T L VGT K +   P R    G+IHIYRF EEGK LE +HKT+VE
Sbjct: 846  AVSIAAVSFTSQEDETFLVVGTGKDMVVSP-RTYTCGFIHIYRFQEEGKELEFIHKTKVE 904

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
              PLAL  FQGRLLAG+GP LR+YDLG ++LLRKC+ ++ P  IV + T   RI V D+Q
Sbjct: 905  QPPLALLGFQGRLLAGVGPDLRIYDLGMRQLLRKCQAQITPRVIVGLQTQGSRIIVSDVQ 964

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            ES  +  Y+  EN L  FADD + RW T    +D++T+AG DKFGNI+ +R P   S+E 
Sbjct: 965  ESVTYVVYKYQENALIPFADDIISRWTTCTTMVDYETVAGGDKFGNIWLLRCPTKASEEA 1024

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL 1123
            +ED +G  +  E+  L GAPN++  +V F+  D+ TS+QK  LV GG + +++  + G++
Sbjct: 1025 DEDGSGAHLIHERQYLQGAPNRLSLVVHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTV 1084

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
            G  + F +RDDVDFF  LEM +  ++ PL GRDH+ YR  Y P K VIDGDLCE F  L 
Sbjct: 1085 GMFVPFITRDDVDFFQTLEMQLASQNAPLAGRDHLIYRGYYAPCKGVIDGDLCETFLLLP 1144

Query: 1184 LDLQRKIADELDRTPGEILKKL 1205
             D ++ IA ELDR+  EI +K+
Sbjct: 1145 NDKKQAIAGELDRSVREIERKI 1166


>gi|321249291|ref|XP_003191408.1| U2 snRNA binding protein [Cryptococcus gattii WM276]
 gi|317457875|gb|ADV19621.1| U2 snRNA binding protein, putative [Cryptococcus gattii WM276]
          Length = 1217

 Score = 1155 bits (2987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1237 (48%), Positives = 813/1237 (65%), Gaps = 51/1237 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLR-PENSGRIETLVSTEIF 58
            M+L +LTL  PT +  A+ G+FSG+K+ EI+  RG   LE+ +    +G+++T+VSTE F
Sbjct: 1    MHLLNLTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY--NPSKNVFDKIHQETFGKSGCRRIVP 116
            G IR++A FRL G  KDYI+  SDSGR+ ILE+  +P+ + F+ ++QE FGKSG RRIVP
Sbjct: 61   GTIRNIAGFRLAGMTKDYILATSDSGRLSILEFVISPTPH-FESLYQEVFGKSGSRRIVP 119

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            GQ+LAVDPKGR+ ++G+ EK KLVYVLNR+T  +L  SSPLEAHK+HT+V  + G+D G+
Sbjct: 120  GQFLAVDPKGRSCLVGSLEKTKLVYVLNRNTEGKLYPSSPLEAHKNHTLVTHVIGVDQGY 179

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVT 236
            DNP++AA+E+DYSE+DQD TG+A   AQK+LTFYELDLGLNHV RKWSEP D  AN+LV 
Sbjct: 180  DNPLYAALEIDYSESDQDPTGEAYENAQKHLTFYELDLGLNHVVRKWSEPTDRRANLLVQ 239

Query: 237  VPGGGD-------GPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE-----RGVLIV 284
            VPGG +       GPSGVLVC E+ +I+K+      R  IPRR +   +     RG++IV
Sbjct: 240  VPGGQNANSDRFEGPSGVLVCTEDHIIWKHMDVDAHRIPIPRRRNPLVQRGDKSRGLIIV 299

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
            SA  H+ K  FFFLLQ+E GD++KV +EH+ E V  LKIKYFDT+PV  S+C+LK GY++
Sbjct: 300  SAVMHKIKGAFFFLLQSEDGDLYKVWIEHNGEDVVALKIKYFDTVPVANSLCILKRGYIY 359

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETE---EGFQP-VFFQPRGLKNLVRIEQVE 400
             ASEF +  LYQFQ++  D   +  SST        +G  P  FF P+ L+NL+ ++ V 
Sbjct: 360  VASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNIDGPLPFAFFDPQPLRNLLLVDSVP 419

Query: 401  SLMPIMDMRIANLF--EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVW 458
            SL PI D  + NL     + PQI+  CGRG RS+ R L+ GL V+EM  S LPGVP+ VW
Sbjct: 420  SLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVTEMVSSPLPGVPTNVW 479

Query: 459  TVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            T+K   +DE+D+YIV+SF N TLVLSIGET+EEV+D+GFL + P+LAV  +G+  L+QVH
Sbjct: 480  TLKLTEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVH 539

Query: 519  PSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EK 577
            P G+RHIR   R++EW  P  +TIV   +N+ QVVIALS  EL+YFE+D  G L E  EK
Sbjct: 540  PYGLRHIRAADRVDEWPAPPGQTIVAATTNQRQVVIALSTAELVYFELDPEGSLSEYQEK 599

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
              + G+  C+ IA VPEGR+R+ FLAVG  + T+ I+SL+PD  +  LS+Q++++PP S+
Sbjct: 600  KALPGNATCVTIAEVPEGRRRTPFLAVGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSI 659

Query: 638  LFLEV-QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
               E+   S+       + A++FLN GL NGVL RTVVD V G LSD+R RFLG +PPKL
Sbjct: 660  CLAEIFDTSID-----KNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKL 714

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                V G+ +++  SSR WL Y ++      PL Y+TLEYA S S+  C +G++ ++GN 
Sbjct: 715  VRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNT 774

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT--AEEREAAKKEC 814
            LR+F+I +LGE   + + PL YTPR+F+  P   +  +IE D    +  A ER   +KE 
Sbjct: 775  LRIFSIPKLGEKLKQDSTPLTYTPRKFISHPFNPVFYMIEADHRTYSKGAIERIVKQKES 834

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                             E    +     L   ++G P+A +  W SC+RVLDP +  T  
Sbjct: 835  -----------------EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIM 877

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
              +L ++EAAFSI    F        L VGT       PK     GY+ +Y   E+G+ L
Sbjct: 878  TFDLDEDEAAFSIAIAYFERGGGEPFLVVGTGVKTTLQPK-GCKEGYLRVYAIKEQGRVL 936

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
            E LHKT+ + IPL L  FQG LLAG+G  LRLY++GKK LLRKCEN  FP  +V+IN   
Sbjct: 937  EFLHKTKTDDIPLCLAGFQGFLLAGVGKSLRLYEMGKKALLRKCENNGFPTAVVTINVQG 996

Query: 995  DRIYVGDIQESFHFCKYRR-DENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
             RI VGD+QES  +C YR     QL IFADDS PRW+T    +D++T+A  DKFGNI+  
Sbjct: 997  ARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFIN 1056

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES 1113
            RL   +S+++++DPTG  I  E+  L GA +K E I  +++G VVTS+ K  LV GG + 
Sbjct: 1057 RLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIAHYNIGSVVTSITKIPLVAGGRDV 1116

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDG 1173
            ++Y T+ G++GA++ F S DD++F S LEMHMR +   L GRDH+AYR  Y P+K V+DG
Sbjct: 1117 LVYTTISGAVGALVPFVSPDDIEFMSTLEMHMRTQDISLVGRDHIAYRGYYVPIKGVVDG 1176

Query: 1174 DLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            DLCE F  L    Q+ IA +LDR+ G++LKKLE++R 
Sbjct: 1177 DLCESFSLLPYPKQQAIASDLDRSVGDVLKKLEQMRT 1213


>gi|58258783|ref|XP_566804.1| U2 snRNA binding protein [Cryptococcus neoformans var. neoformans
            JEC21]
 gi|338819361|sp|P0CR23.1|RSE1_CRYNB RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|338819362|sp|P0CR22.1|RSE1_CRYNJ RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|57222941|gb|AAW40985.1| U2 snRNA binding protein, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1217

 Score = 1154 bits (2985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/1237 (48%), Positives = 811/1237 (65%), Gaps = 51/1237 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLR-PENSGRIETLVSTEIF 58
            M+L +LTL  PT +  A+ G+FSG+K+ EI+  RG   LE+ +    +G+++T+VSTE F
Sbjct: 1    MHLLNLTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY--NPSKNVFDKIHQETFGKSGCRRIVP 116
            G IR++A FRL G  KDYI+  SDSGR+ ILE+  +P+ + F+ ++QE FGKSG RRIVP
Sbjct: 61   GTIRNIAGFRLAGMTKDYILATSDSGRLSILEFVISPTPH-FESLYQEVFGKSGSRRIVP 119

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            GQ+LAVDPKGR+ ++G+ EK KLVYVLNR+T  +L  SSPLEAHK+HT+V  I G+D G+
Sbjct: 120  GQFLAVDPKGRSCLVGSLEKTKLVYVLNRNTEGKLYPSSPLEAHKNHTLVTHIVGVDQGY 179

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVT 236
            DNP++AA+E DYSE+DQDSTG+A    QK+LTFYELDLGLNHV RKWSEP D  AN+LV 
Sbjct: 180  DNPLYAALETDYSESDQDSTGEAYENTQKHLTFYELDLGLNHVVRKWSEPTDRRANLLVQ 239

Query: 237  VPGGGD-------GPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE-----RGVLIV 284
            VPGG +       GPSGVLVC E+ +I+K+      R  IPRR +   +     RG++IV
Sbjct: 240  VPGGQNANSDRFEGPSGVLVCTEDHIIWKHMDVEAHRIPIPRRRNPLVQRGDKSRGLIIV 299

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
            SA  H+ K  FFFLLQ+E GD++KV +EH+ E V  LKIKYFDT+PV  S+C+LK GY++
Sbjct: 300  SAVMHKIKGAFFFLLQSEDGDLYKVWIEHNGEDVVALKIKYFDTVPVANSLCILKRGYIY 359

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETE---EGFQP-VFFQPRGLKNLVRIEQVE 400
             ASEF +  LYQFQ++  D   +  SST        +G  P  FF P+ L+NL+ ++ V 
Sbjct: 360  VASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNIDGPLPFAFFDPQPLRNLLLVDTVP 419

Query: 401  SLMPIMDMRIANLF--EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVW 458
            SL PI D  + NL     + PQI+  CGRG RS+ R L+ GL V+EM  S LPGVP+ VW
Sbjct: 420  SLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMVSSPLPGVPTNVW 479

Query: 459  TVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            T+K   +DE+D+YIV+SF N TLVLSIGET+EEV+D+GFL + P+LAV  +G+  L+QVH
Sbjct: 480  TLKLTEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVH 539

Query: 519  PSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EK 577
            P G+RHIR   R++EW  P  +TIV   +NR QVVIALS  EL+YFE+D  G L E  EK
Sbjct: 540  PYGLRHIRAADRVDEWPAPPGQTIVAATTNRRQVVIALSTAELVYFELDPEGSLSEYQEK 599

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
              + G+  C+ IA VPEGR+R+ FLAVG  + T+ I+SL+PD  +  LS+Q++++PP S+
Sbjct: 600  KALPGNATCVTIAEVPEGRRRTSFLAVGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSI 659

Query: 638  LFLEV-QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
               E+   S+       + A++FLN GL NGVL RTVVD V G LSD+R RFLG +PPKL
Sbjct: 660  CLAEIFDTSID-----KNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKL 714

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                V G+ +++  SSR WL Y ++      PL Y+TLEYA S S+  C +G++ ++GN 
Sbjct: 715  VRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNT 774

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGAL--TAEEREAAKKEC 814
            LR+F I +LGE   + +  L YTPR+F+  P   +  +IE D      +A ER   +KE 
Sbjct: 775  LRIFNIPKLGEKLKQDSTALTYTPRKFISHPFNSVFYMIEADHRTYSKSAIERIVKQKES 834

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                             E    +     L   ++G P+A +  W SC+RVLDP +  T  
Sbjct: 835  -----------------EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIM 877

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
             L+L ++EAAFSI    F        L VGT       PK     GY+ +Y   E+G+ L
Sbjct: 878  TLDLDEDEAAFSIAIAYFERGGGEPFLVVGTGVKTTLQPK-GCKEGYLRVYAIKEQGRIL 936

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
            E LHKT+ + IPL L  FQG LLAGIG  LRLY++GKK LLRKCEN  FP  +V+IN   
Sbjct: 937  EFLHKTKTDDIPLCLAGFQGFLLAGIGKSLRLYEMGKKALLRKCENNGFPTAVVTINVQG 996

Query: 995  DRIYVGDIQESFHFCKYRR-DENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
             RI VGD+QES  +C YR     QL IFADDS PRW+T    +D++T+A  DKFGNI+  
Sbjct: 997  ARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFIN 1056

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES 1113
            RL   +S+++++DPTG  I  E+  L GA +K E I  +++G VVTS+ K  LV GG + 
Sbjct: 1057 RLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIGHYNIGSVVTSITKIPLVAGGRDV 1116

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDG 1173
            ++Y T+ G++GA++ F S DD++F S LEMHMR +   L GRDH+AYR  Y P+K V+DG
Sbjct: 1117 LVYTTISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISLVGRDHIAYRGYYVPIKGVVDG 1176

Query: 1174 DLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            DLCE F  L    Q+ IA +LDR+ G++LKKLE++R 
Sbjct: 1177 DLCESFSLLPYPKQQAIALDLDRSVGDVLKKLEQMRT 1213


>gi|167522323|ref|XP_001745499.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775848|gb|EDQ89470.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1172

 Score = 1154 bits (2984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1173 (49%), Positives = 788/1173 (67%), Gaps = 25/1173 (2%)

Query: 47   GRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETF 106
            G    + +TEIFG IR L  FRLTG  KDY++V +DSGRI IL+Y+ + N  +++H ETF
Sbjct: 14   GHCGLIAATEIFGLIRDLRAFRLTGGTKDYLIVSTDSGRITILQYDVTANKLERVHMETF 73

Query: 107  GKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIV 166
            GKSGCRRIVPGQYLA DPKGRAVM+GA EKQKLVY+LNRD AARLTISSPLEAHK H++V
Sbjct: 74   GKSGCRRIVPGQYLATDPKGRAVMVGAVEKQKLVYILNRDAAARLTISSPLEAHKGHSLV 133

Query: 167  YSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP 226
            Y + G+D GF+NP+FA +ELDY + D+D +G+A     + L FYELDLGLNHV RK S  
Sbjct: 134  YDMVGVDVGFENPLFACLELDYEDVDEDPSGEALELLAQTLVFYELDLGLNHVVRKESIE 193

Query: 227  VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRAD-LPAERGVLIV 284
            +D+ AN L+ VPGG DGPSGVLVC +  + ++  G H  +   IPRR D     R  +I 
Sbjct: 194  LDSFANKLIPVPGGADGPSGVLVCGDGQITWRTVGEHTPISVSIPRRLDPFRQPRSTIIN 253

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
            +   H+ K  FFFLLQTE GD+FK+T+ HD + V  + +KYFDT+PV  SM +LK G LF
Sbjct: 254  AFCMHKTKKTFFFLLQTEEGDLFKLTMVHDEDEVQGMILKYFDTVPVAKSMVLLKIGLLF 313

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
             ASE G+H LYQ   +G + D      + + TE   + ++F+PR L NL  ++ +ESL P
Sbjct: 314  IASEHGDHQLYQIAQLGDNKD----EPSFLSTEPEDKVLYFRPRPLLNLAPLDVIESLAP 369

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            +MD ++A+  +++ PQ++ LCGRG  SSLR+LR GL VS MA S LPG PSAVW+VK++V
Sbjct: 370  VMDCQLADAGQQDGPQLYALCGRGSGSSLRVLRHGLEVSAMAESPLPGNPSAVWSVKRHV 429

Query: 465  NDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             DE D YIV+SF +ATLVL IGETVEEV+DSGFL +  +L+ S IGDD+L+Q+H  GIRH
Sbjct: 430  EDEADTYIVMSFVDATLVLGIGETVEEVTDSGFLGSVATLSASRIGDDALLQIHAMGIRH 489

Query: 525  IREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGD 583
            I  DGRINEW+ P +  I     N  Q V+ALS GEL+YFE+D +GQL+E  E+ EMS  
Sbjct: 490  ILHDGRINEWKAPDRTKISHCAVNERQAVVALSNGELVYFELDRSGQLIEHSERVEMSSQ 549

Query: 584  VACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQ 643
            V  L +A +PEG + +RFLA+G  D T+R++SLD  DC+  LS+Q++     SL  +EV+
Sbjct: 550  VTALALAPIPEGAQTARFLALGLDDQTVRLMSLDKSDCLAPLSMQALPGAAASLCMVEVR 609

Query: 644  ASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG 703
             + G       P+ L L  GL NGVL R+ VD +T  LSD+R+R+LG R  KLF V V  
Sbjct: 610  GTHG------EPSGLSLAIGLGNGVLMRSRVDTLTADLSDTRTRYLGARAVKLFPVKVAE 663

Query: 704  RAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIE 763
              A+L LS++PWL Y ++G   +TPLSY+ LEYA++FSSDQC EGV +VAGN LR+F  E
Sbjct: 664  EPAVLALSTKPWLSYRYQGHSRITPLSYDALEYASAFSSDQCPEGVAAVAGNTLRIFAFE 723

Query: 764  RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGEN 823
            +LG+ F++ ++PL YT RR +L P+  L  I E DQG L+      AK E        + 
Sbjct: 724  KLGQVFHQNSIPLEYTGRRLLLDPEASLAFIAEGDQGCLSV----TAKAERLSRIASHQA 779

Query: 824  GNGNMDQMENGDDENK----YDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
            G    +Q +  +D        +PL  +Q+G   A  + W S IRV++     TTCL+ L 
Sbjct: 780  GTAMAEQTDPQEDLTSPAALAEPLDVKQFGQSYAGDNLWASNIRVVNLAQGETTCLVPLA 839

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
             +E   S+  V F    +   +  G  KG +  PK+  + G   +  F  +G  + LLH+
Sbjct: 840  QDEMVMSLARVRFASSPNDKHIVAGVVKGWK--PKQQSMDGAF-LLTFQVQGDQVVLLHR 896

Query: 940  TQVEG-IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            T V+G +P AL +F G++LAG+G  LR++DLGKK+LL K EN+  P+ +V I T   RI 
Sbjct: 897  TAVDGGLPCALAEFAGKVLAGVGNTLRIFDLGKKKLLLKTENRQLPSQVVHITTMGTRIC 956

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
              D + SF + KY+  EN L IFADD+ PRW T    +D+ T+AGADKFGN    RL  D
Sbjct: 957  AADQKHSFVWLKYKPAENALTIFADDTNPRWCTRGVLLDYQTVAGADKFGNFVVARLGTD 1016

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            ++D+I++DPTG K  W +G LNGA  KM+ +  +HVG+ + SLQK +LVPGG E ++Y T
Sbjct: 1017 LTDQIDDDPTGSKAFWSRGILNGASQKMDILCNYHVGETILSLQKVTLVPGGAECILYTT 1076

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            + G +G  L FS+RDD +FF+ LE+H+RQEH PLCGRDH+ YRSAYFPVK VIDGDLCEQ
Sbjct: 1077 MSGGIGLFLPFSNRDDFEFFTSLELHLRQEHAPLCGRDHLHYRSAYFPVKSVIDGDLCEQ 1136

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +P LS  ++ ++A+ L+R   +++KK+E+IRN+
Sbjct: 1137 YPLLSASVKNEVAEGLERPTTDVIKKIEDIRNR 1169


>gi|357496593|ref|XP_003618585.1| Splicing factor 3B subunit [Medicago truncatula]
 gi|355493600|gb|AES74803.1| Splicing factor 3B subunit [Medicago truncatula]
          Length = 702

 Score = 1153 bits (2982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/726 (78%), Positives = 629/726 (86%), Gaps = 55/726 (7%)

Query: 484  SIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIV 543
            S+ ETV+EV+D+GFLDTTPSL+VSLIGDDSLMQVHP+GIRHIREDG INEWRTPGKRTI 
Sbjct: 30   SVRETVKEVTDNGFLDTTPSLSVSLIGDDSLMQVHPNGIRHIREDGHINEWRTPGKRTIA 89

Query: 544  KVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLA 603
            KVGSNRLQVVIAL+GGELIYFEVD+TGQL+EVEKHEMSGDVACLDIA VPEGR+RSRFLA
Sbjct: 90   KVGSNRLQVVIALNGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLA 149

Query: 604  VGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAG 663
            VGSYD TIRILSLDPDDCMQ L +QS+SS  ESLLFLEVQASVGGEDG            
Sbjct: 150  VGSYDKTIRILSLDPDDCMQTLGIQSLSSASESLLFLEVQASVGGEDG------------ 197

Query: 664  LQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGR 723
              NGVL RTVVDMVTG LSDSRS FLGLRPPKLF +VV G+ AMLCLSSRPWLGYIH+G 
Sbjct: 198  --NGVLSRTVVDMVTGLLSDSRSPFLGLRPPKLFPIVVRGKRAMLCLSSRPWLGYIHQGH 255

Query: 724  FLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRF 783
            FLLTPLSYETLE+AASFSSDQCVEGVV++AG ALR+FTIERLGETFNET +PLRYTP +F
Sbjct: 256  FLLTPLSYETLEFAASFSSDQCVEGVVALAGEALRIFTIERLGETFNETVIPLRYTPMKF 315

Query: 784  VLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPL 843
            VLQPK+KL+V+IE+DQGA TAEEREA               NG       G+DE+K DPL
Sbjct: 316  VLQPKRKLLVVIESDQGAFTAEEREA---------------NG-------GEDEDKDDPL 353

Query: 844  SDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAV 903
            SDE YGYPKAESDKW SCIR+LDP++ NTTCLLELQDNEAAFS CTVNFHDKE+GTLL V
Sbjct: 354  SDEHYGYPKAESDKWASCIRILDPKTGNTTCLLELQDNEAAFSGCTVNFHDKEYGTLLDV 413

Query: 904  GTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPV 963
            GTAKGLQF P+R++ AG+IHIYRF+E+G+SLELLHKTQVEG+PLAL QFQGRLLAGIGPV
Sbjct: 414  GTAKGLQFTPRRSLTAGFIHIYRFLEDGRSLELLHKTQVEGVPLALSQFQGRLLAGIGPV 473

Query: 964  LRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFAD 1023
            LR YDLGK+RLLRK ENKLFPNTIVSI TYRDRIYVGD QESFH+CKYR DENQLYIFAD
Sbjct: 474  LRFYDLGKRRLLRKYENKLFPNTIVSIQTYRDRIYVGDTQESFHYCKYRWDENQLYIFAD 533

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAP 1083
            D VPRWLTA++HIDFDTMAG                   IEEDPTGG+IKWEQGKLNGAP
Sbjct: 534  DCVPRWLTASYHIDFDTMAG-------------------IEEDPTGGRIKWEQGKLNGAP 574

Query: 1084 NKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEM 1143
            NK+EEIVQFHVGDV++ LQKASL+PGGGE ++ GTVMGS+GA+ AF+SRDDVDFFSHLEM
Sbjct: 575  NKVEEIVQFHVGDVISCLQKASLIPGGGECILNGTVMGSIGALHAFTSRDDVDFFSHLEM 634

Query: 1144 HMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILK 1203
            HMRQ++PPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL +DLQRKIADELDRT GEILK
Sbjct: 635  HMRQDNPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTRGEILK 694

Query: 1204 KLEEIR 1209
            KLEE +
Sbjct: 695  KLEEYK 700


>gi|405117821|gb|AFR92596.1| pre-mRNA-splicing factor RSE1 [Cryptococcus neoformans var. grubii
            H99]
          Length = 1217

 Score = 1150 bits (2976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1237 (48%), Positives = 811/1237 (65%), Gaps = 51/1237 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLR-PENSGRIETLVSTEIF 58
            M+L +LTL  PT +  A+ G+FSG+K+ EI+  RG   LE+ +    +G+++T+VSTE F
Sbjct: 1    MHLLNLTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY--NPSKNVFDKIHQETFGKSGCRRIVP 116
            G IR++A FRL G  KDYI+  SDSGR+ ILE+  +P+ + F+ ++QE FGKSG RRIVP
Sbjct: 61   GTIRNIAGFRLAGMTKDYILATSDSGRLSILEFVISPTPH-FESMYQEVFGKSGSRRIVP 119

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            GQ+LAVDPKGR+ ++G+ EK KLVYVLNR+T  +L  SSPLEAHK+HT+V  + G+D G+
Sbjct: 120  GQFLAVDPKGRSCLVGSLEKTKLVYVLNRNTEGKLYPSSPLEAHKNHTLVTHVVGVDQGY 179

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVT 236
            DNP++AA+E+DYSE+DQD TG+A    QK+LTFYELDLGLNHV RKWSEP D  AN+LV 
Sbjct: 180  DNPLYAALEIDYSESDQDPTGEAYENTQKHLTFYELDLGLNHVVRKWSEPTDRRANLLVQ 239

Query: 237  VPGGG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE-----RGVLIV 284
            VPGG        +GPSGVLVC E+ +I+K+      R  IPRR +   +     RG++IV
Sbjct: 240  VPGGQSANSDRFEGPSGVLVCTEDHIIWKHMDVEAHRIPIPRRRNPLVQRGDKSRGLIIV 299

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
            SA  H+ K  FFFLLQ+E GD++KV +EH+ E V  LKIKYFDT+PV  S+C+LK GY++
Sbjct: 300  SAVMHKIKGAFFFLLQSEDGDLYKVWIEHNGEDVVALKIKYFDTVPVANSLCILKRGYIY 359

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETE---EGFQP-VFFQPRGLKNLVRIEQVE 400
             ASEF +  LYQFQ++  D   +  SST        +G  P  FF P+ L+NL+ ++ V 
Sbjct: 360  VASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNIDGPLPFAFFDPQPLRNLLLVDTVP 419

Query: 401  SLMPIMDMRIANLF--EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVW 458
            SL PI D  + NL     + PQI+  CGRG RS+ R L+ GL V+EM  S LPGVP+ VW
Sbjct: 420  SLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMVSSPLPGVPTNVW 479

Query: 459  TVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            T+K   +DE+D+YIV+SF N TLVLSIGET+EEV+D+GFL + P+LAV  +G+  L+QVH
Sbjct: 480  TLKLTEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVH 539

Query: 519  PSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EK 577
            P G+RHIR   R++EW  P  +TIV   +N+ QVVIALS  EL+YFE+D  G L E  EK
Sbjct: 540  PYGLRHIRAADRVDEWPAPPGQTIVAATTNQRQVVIALSTAELVYFELDPEGSLSEYQEK 599

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
              + G+  C+ IA VPEGR+R+ FLAVG  + T+ I+SL+PD  +  LS+Q++++PP S+
Sbjct: 600  KALPGNATCVTIAEVPEGRRRTPFLAVGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSI 659

Query: 638  LFLEV-QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
               E+   S+       + A++FLN GL NGVL RTVVD V G LSD+R RFLG +PPKL
Sbjct: 660  CLAEIFDTSID-----KNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKL 714

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                V G+ +++  SSR WL Y ++      PL Y+TLEYA S S+  C +G++ ++GN 
Sbjct: 715  VRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNT 774

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGAL--TAEEREAAKKEC 814
            LR+F+I +LGE   + +  L YTPR+F+  P   +  +IE D      +A ER   +KE 
Sbjct: 775  LRIFSIPKLGEKLKQDSTALTYTPRKFISHPFNSVFYMIEADHRTYSKSAIERIVKQKES 834

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                             E    +     L   ++G P+A +  W SC+RVLDP +  T  
Sbjct: 835  -----------------EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIM 877

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
             L+L ++EAAFSI    F        L VGT       PK     GY+ +Y   E+G+ L
Sbjct: 878  TLDLDEDEAAFSIAIAYFERGGGEPFLVVGTGVKTTLQPK-GCKEGYLRVYAIKEQGRVL 936

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
            E LHKT+ + IPL L  FQG LLAG+G  LRLY++GKK LLRKCEN  FP  +V+IN   
Sbjct: 937  EFLHKTKTDDIPLCLAGFQGFLLAGVGKSLRLYEMGKKALLRKCENNGFPTAVVTINVQG 996

Query: 995  DRIYVGDIQESFHFCKYRR-DENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
             RI VGD+QES  +C YR     QL IFADDS PRW+T    +D++T+A  DKFGNI+  
Sbjct: 997  ARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFIN 1056

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES 1113
            RL   +S+++++DPTG  I  E+  L GA +K E I  +++G VVTS+ K  LV GG + 
Sbjct: 1057 RLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIAHYNIGSVVTSITKIPLVAGGRDV 1116

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDG 1173
            ++Y T+ G++GA++ F S DD++F S LEMHMR +     GRDH+AYR  Y P+K V+DG
Sbjct: 1117 LVYTTISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISPVGRDHIAYRGYYVPIKGVVDG 1176

Query: 1174 DLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            DLCE F  L    Q+ IA +LDR+ G++LKKLE++R 
Sbjct: 1177 DLCESFSLLPYPKQQAIATDLDRSVGDVLKKLEQMRT 1213


>gi|299751161|ref|XP_001830098.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
 gi|298409248|gb|EAU91763.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
          Length = 1205

 Score = 1148 bits (2969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1232 (48%), Positives = 816/1232 (66%), Gaps = 56/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPEN-SGRIETLVSTEIFG 59
            M+LY+ TLQ  + I+ A  GNFSG +  EI+V+ G  LELL+ +N SG++ T+   ++FG
Sbjct: 1    MHLYNYTLQPSSAIVQAAVGNFSGLRQQEILVSNGTRLELLQVDNDSGKLSTVAGADVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +IRSLA FRLTG  KDY +VGSDSGRIVILEY+P  NVF+K+HQET+GKSG RRIVPGQY
Sbjct: 61   SIRSLAAFRLTGGSKDYAIVGSDSGRIVILEYDPKTNVFNKLHQETYGKSGTRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DP+GR+VMI A E  KLVYVLNRD A  LTISSPL AH++ TIV+ + G+D GFDNP
Sbjct: 121  LATDPRGRSVMIAAMENSKLVYVLNRDVATNLTISSPLGAHRASTIVHDVVGVDVGFDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            ++AA+E+DYS++DQD TG A   A+K LT+YELDLGLNHV RKWSEP D  AN+LV VPG
Sbjct: 181  VYAALEVDYSQSDQDPTGNALRRAEKLLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG 240

Query: 240  G-------GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE--RGVLIVSAATHR 290
            G        DGPSGVLVC EN +IY++   P  R  IPRR D  A+  + V+IV+A  H+
Sbjct: 241  GQSTNGATHDGPSGVLVCCENHIIYQHGDAPSHRVPIPRRQDPVADPNQDVIIVAAVMHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             K        TE GD+FK T++H++  VS LKIKYF+T+PV +++C+LK G LF ASEFG
Sbjct: 301  MK--------TEDGDVFKATVDHEDGVVSSLKIKYFETVPVASNLCILKQGLLFVASEFG 352

Query: 351  NHALYQFQAIGADPDV-EASSST-----LMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
            NH LY+F  +G D D  E SSS+     + E E+      F PR ++NL+ I+++ SL P
Sbjct: 353  NHHLYRFCKLGDDDDQPEFSSSSYPSYGMAEPEQPLPRASFDPRPMENLMLIDELSSLNP 412

Query: 405  IMDMRIAN-LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPG--VPSAVWTVK 461
            ++D +I     + EAP+IF  CGRGP SS +IL  GL V EMA S+LPG   P ++W+ K
Sbjct: 413  VLDAKILKPSLDSEAPKIFAACGRGPASSFKILSHGLEVDEMASSELPGFLAPHSLWSTK 472

Query: 462  KNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSG 521
            +   D +D  +V+SF NAT+VLSIGE++EEV DSGFL + P+LAV  IG++ L+QVH  G
Sbjct: 473  RMQTDHYDNLLVMSFQNATIVLSIGESMEEVKDSGFLTSMPTLAVQQIGENGLIQVHTHG 532

Query: 522  IRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHE-M 580
            IRH+  D ++NEW+ P  +TIV   +NR QVV+ALS  E++YFE+D  GQL E +  + M
Sbjct: 533  IRHLV-DSQVNEWKVPQGQTIVAANTNRRQVVVALSSAEIVYFELDQEGQLNEYQDMKAM 591

Query: 581  SGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL-LF 639
               V  L +  VPEGR R  +LAVG  D T+R++SLDPD  ++ +S+Q++++PP S+ + 
Sbjct: 592  GSTVLALGLGEVPEGRLRFPYLAVGCEDQTVRVMSLDPDSTLETISLQALTAPPSSICIA 651

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
              + AS+          S+F+N GL NGVL RTV+D   GQL+D+R+RFLG +P +L  V
Sbjct: 652  YMLDASINKVQ-----RSMFVNIGLANGVLLRTVLDGTNGQLTDTRTRFLGTKPVRLLRV 706

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
             + G  A+L +SSR WL Y H+ +   TPL+ ET E A+SF+ + C EG++S+A N L +
Sbjct: 707  KLKGEDAILAISSRVWLNYSHQQKMEFTPLACETPECASSFTGESCPEGIISIAKNTLSI 766

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAG 819
             T+ +LG    + ++PL +TPR+FV  P  +   +IE+DQ  L+ EE +           
Sbjct: 767  STVSKLGMKLKQESVPLAFTPRKFVTHPGNRFFYLIESDQRTLSEEEEKK---------- 816

Query: 820  MGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
                    +  +    D++    L  + +G  +A +  W S I + DP  A T   L L+
Sbjct: 817  -------KLADLNISRDDHPILQLPAKIFGRTRASAGHWASRIHIFDPMEAKTVATLPLK 869

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
             NEAAFSI  V F        L VGTA      P +   A Y+ +Y+ V EG  LELLH+
Sbjct: 870  ANEAAFSIAVVPFASTGGEYHLVVGTAMHHLVTPPQ-ASASYLKVYKIVNEGTGLELLHE 928

Query: 940  TQVEG--IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRI 997
            T ++   +P AL  FQGRLLAG+G  LR+YDLGKK+LLRK E K  P  IVS+ T   RI
Sbjct: 929  TPIQDSELPRALLAFQGRLLAGVGKALRIYDLGKKKLLRKAETK-SPTAIVSLATQGSRI 987

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             +GD+QES  F  Y+  EN+L IF DD+ PRW++A   +D++T+A  DKFGNI+  RL  
Sbjct: 988  VIGDMQESTLFAVYKEAENRLLIFGDDTQPRWVSAMTMVDYNTVAVGDKFGNIFVNRLDS 1047

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYG 1117
             +SD+++EDPTG  I  E+  LNGAP+K + +  FHVGD++TS+ K SLV GG E ++Y 
Sbjct: 1048 TISDQVDEDPTGAGILHEKATLNGAPHKTKMLAHFHVGDIITSIHKVSLVVGGREVLLYT 1107

Query: 1118 TVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCE 1177
             + G++G ++  +S++D++F + LE H+R E   L GRDH+++R  Y PVK VIDGDLCE
Sbjct: 1108 GLQGTIGILVPLTSKEDIEFLTMLEQHIRNEQGSLVGRDHLSWRGYYVPVKAVIDGDLCE 1167

Query: 1178 QFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
             +  LS   Q  IA ELDRT G++LKKL+++R
Sbjct: 1168 TYGGLSSSKQSAIASELDRTVGDVLKKLDQMR 1199


>gi|403370717|gb|EJY85226.1| Spliceosomal protein sap, putative [Oxytricha trifallax]
          Length = 1203

 Score = 1146 bits (2965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/1226 (47%), Positives = 797/1226 (65%), Gaps = 36/1226 (2%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-PENSGRIETLVSTEIFG 59
            MYLYSLTL Q T I  ++ GNFSG K  EIVV++GK++E+LR  E + +++ +   E+FG
Sbjct: 1    MYLYSLTLNQATAINNSVYGNFSGPKQHEIVVSKGKIMEMLRLDEATQKLQVVYRQEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR +  FRL G QKD++VVGSDSG+IVILEY+   N F KIHQETFGK+GCRRIVPG+Y
Sbjct: 61   LIRKMIPFRLLGMQKDFLVVGSDSGKIVILEYDGEHNKFVKIHQETFGKTGCRRIVPGEY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            +A DPKGRA+MIGA EKQK V++LNRD+  +LTISSPLEAHK HTI +++ G+D G +NP
Sbjct: 121  IAADPKGRAIMIGAVEKQKFVFILNRDSQNKLTISSPLEAHKPHTITFAMVGVDVGIENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FA +E+DY EAD   +     + QK L FYE+DLGLNHV RK+S PVDN A+ML+ VPG
Sbjct: 181  QFACLEVDYGEADSTYSAVVTGQHQKMLVFYEMDLGLNHVVRKYSTPVDNSAHMLIAVPG 240

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
               GPSG+LV  EN + YK   H D    IP R +   + G    + +T+  K +FFFLL
Sbjct: 241  EPYGPSGILVVCENMISYKKVDHDDRECSIPIRNEQADKNGTFFTAHSTYTSKDMFFFLL 300

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
              E+GDIFK+ L   N  V  + I+YFDT   T  M +L+ G LF ASEF NH LY F  
Sbjct: 301  SNEFGDIFKINLNFTNAQVHGMTIQYFDTTTPTVCMNILRPGQLFCASEFSNHTLYTFLD 360

Query: 360  IGA-DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
            IG  DP+   +SS   +         + PR   NL  +++  +L  I DM++ +L  E  
Sbjct: 361  IGENDPNPIITSSADRKPHGQQTLTTYNPREFLNLQAVDEFPNLASINDMKVEDLTGEGN 420

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNN 478
            PQI+   GRG +  LR+LR GL + E AV+ +P  P  V TVK    D FD Y++VSF  
Sbjct: 421  PQIYLASGRGAQGCLRVLRHGLTIIEKAVTAMPQKPLNVITVKGKTTDVFDKYMIVSFQQ 480

Query: 479  ATLVLSIG-ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG---RINEW 534
             TLVLSIG E V EV DSGF+D   +L V ++ D+S +QV P  I H++ D    +  +W
Sbjct: 481  QTLVLSIGQEKVSEVKDSGFVDNERTLHVGILEDNSYIQVTPKSIIHVKGDQQNRKRAKW 540

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD-MTGQLLEVEKHEMSGDVACLDIASVP 593
             + G+  IVK  SN+ QV +++ GG+++YFE+D M+G L EVE      +VAC+DIA VP
Sbjct: 541  DS-GQGKIVKACSNQRQVAVSIEGGQIVYFELDEMSGTLNEVESRFYDSEVACIDIADVP 599

Query: 594  EGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGAD 653
            EGR+R RFLAVG  D T++I+SLDP+ C+Q +S+Q++ + PES+  +  Q     ++ A 
Sbjct: 600  EGRQRCRFLAVGYADKTVKIMSLDPESCLQRISMQALPAHPESVALISFQR----DEVAQ 655

Query: 654  HPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
                LFL+ GL NGVL RT+VD VTG LSDSR+RFLG     L  V  G   A++ L ++
Sbjct: 656  QQQQLFLHVGLVNGVLLRTLVDNVTGVLSDSRTRFLGTNSISLAKVRQGNTNALVALCNK 715

Query: 714  PWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVE-GVVSVAGNALRVFTIERLGETFN 770
            PWL Y H    +  +TPLSYE LE A+SF S++C + G+V+++GN LR+ T+ERLGE F 
Sbjct: 716  PWLCYTHMSTNKVNITPLSYEMLEVASSFCSEKCPDGGIVAISGNTLRIITVERLGENFT 775

Query: 771  ETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQ 830
               +PLRYTP +  +  +   +VI+E D  + +  ER   K+E                 
Sbjct: 776  HKVMPLRYTPTKIQIHRETNYLVILEKDHNSYSYSERLRMKEEI---------------- 819

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTV 890
             +N +DEN Y  L + +  YP+A  +K+ SCIR++DP    T  L+E ++NE  FS    
Sbjct: 820  AKNTEDEN-YLALDESRISYPRAGQNKFASCIRIVDPYLLQTLELIEFENNEVVFSHFIA 878

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
                    T L +GTA  + F P R+   G+I  Y+FV  G+SL+L+H T  E IP+A  
Sbjct: 879  TTLGNPGETHLILGTALNVTFQP-RSCSVGFIKTYKFVNNGQSLQLMHSTPCEDIPMAFN 937

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
            +++GRL+AG+GP+LR+Y+LG+K+LLRK ENK F   I+ I     RIY GD+QES H  K
Sbjct: 938  EYKGRLIAGVGPILRIYELGQKKLLRKVENKNFQAPIIQIQVDEGRIYAGDLQESVHVLK 997

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            Y+ ++ QLYIF+DD + RWLT+   +D DT+AG DKF N++  RLP    D+ E+DPT  
Sbjct: 998  YKPEDVQLYIFSDDILNRWLTSFCLLDHDTIAGVDKFENVFINRLPVGCEDDAEDDPTAT 1057

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGG---ESVIYGTVMGSLGAML 1127
            K KWE G LNGA  KM+ I QF  G+V T +QK SL    G   E +++GT  GSLGA+L
Sbjct: 1058 KFKWENGYLNGAAFKMDPICQFFTGEVGTCIQKCSLNTLSGTNSEIILFGTTSGSLGALL 1117

Query: 1128 AFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQ 1187
             F +R+++DFF HLEM++R E  PLCGRDH+ +RS+Y PVKDV+DGDLCEQF +L  + Q
Sbjct: 1118 PFETREEIDFFVHLEMYLRIEAQPLCGRDHVTFRSSYVPVKDVVDGDLCEQFASLEFNKQ 1177

Query: 1188 RKIADELDRTPGEILKKLEEIRNKIV 1213
            R +A+E+DRTP E++KKLE +RNKI+
Sbjct: 1178 RVLAEEMDRTPPEVMKKLENMRNKIL 1203


>gi|406698009|gb|EKD01256.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 8904]
          Length = 1216

 Score = 1145 bits (2963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1239 (48%), Positives = 816/1239 (65%), Gaps = 50/1239 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLRPE-NSGRIETLVSTEIF 58
            M+L +LTLQ  T + AA  G+FSG K  EI+  RG   LE+L+   ++G+++++ S+E F
Sbjct: 1    MHLLNLTLQPATSVTAAAVGSFSG-KGQEILAVRGSTRLEILKLNPSTGQLDSICSSEAF 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY--NPSKNVFDKIHQETFGKSGCRRIVP 116
            G +R++A FRL G  KDYIV+ SDSGR+ I+E   +P+ + F+ ++QE +GKSG RR +P
Sbjct: 60   GTVRNVAAFRLAGMGKDYIVLSSDSGRLSIIELVISPTPH-FESLYQEVYGKSGSRRTIP 118

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            GQ+LAVDPKGR+ M GA EKQKL Y+LNR+T  ++  SSPLEAHK+HT+V ++   D G+
Sbjct: 119  GQFLAVDPKGRSAMFGAVEKQKLCYILNRNTEGKVYPSSPLEAHKNHTLVVNMIACDTGY 178

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVT 236
            DNP+FAA+ELDY ++D D+TG+A   A+K+LTFYELDLGLNHV RKWSEP D  AN+LV 
Sbjct: 179  DNPMFAALELDYGDSDHDATGEAYRAAEKHLTFYELDLGLNHVVRKWSEPTDRRANLLVQ 238

Query: 237  VPGGG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE-----RGVLIV 284
            VPGG        DGP GVLVC E++VI+K+      R  IPRR +  A+     RG++IV
Sbjct: 239  VPGGQNANTDRFDGPGGVLVCTEDYVIWKHMDAEAHRVPIPRRRNPMAKPGQSSRGIIIV 298

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
            +A TH+ K  FFFLLQ+E GD+FK T+EH+ E V  L+IKYFDT+PV  S+C+LKSGYLF
Sbjct: 299  AAVTHKIKGSFFFLLQSEDGDLFKATIEHEGEDVRALRIKYFDTVPVATSLCILKSGYLF 358

Query: 345  AASEFGNHALYQFQAIGADPDVEASSST----LMETEEGFQPVFFQPRGLKNLVRIEQVE 400
             ASEFG+  LYQFQ++  D      SST        EE     FFQPR L+NL+  + + 
Sbjct: 359  VASEFGDQGLYQFQSLADDDGEREWSSTDYPGFGLGEEHLPYAFFQPRPLQNLLLADTLS 418

Query: 401  SLMPIMDMRIANLF--EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVW 458
            SL PI+D ++ NL     + PQI+  CGRGPRS+ R L+ GL V+ +  S LPGVP+AVW
Sbjct: 419  SLDPILDAQVVNLLGNASDTPQIYAACGRGPRSTFRSLKHGLDVNVLVESPLPGVPNAVW 478

Query: 459  TVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            T+K + +DE+D+YIV+SF N TLVLSIGET+EEV+D+GFL + P+LAV  +G   L+QVH
Sbjct: 479  TLKLSEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGSAGLLQVH 538

Query: 519  PSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EK 577
            P+G+RHIR   R++EW  P   TIV   +N+ QVVIALS  EL+YFE+D  G L E  E+
Sbjct: 539  PAGLRHIRAADRVDEWNAPAGTTIVSATTNKNQVVIALSTQELVYFELDEEGSLNEYQER 598

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
              + G+  C+ IA VPEGR+R+ +LAVG  + T+ I+SL+PD+ ++ LS+Q++++PP  +
Sbjct: 599  KSLPGNATCVSIADVPEGRRRTPYLAVGCDNQTVHIISLEPDNTLETLSLQALTAPPSDI 658

Query: 638  LFLEV-QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
               E+   S+       + A++FL  GL NGVL RTVVD V G LSD+R RFLG +PP++
Sbjct: 659  CLAEIFDTSID-----KNRATMFLTIGLLNGVLLRTVVDPVDGSLSDTRLRFLGSKPPRI 713

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                V G  A++  SSR WL Y ++      PL Y+ LEYA + S+  C +G++ ++GN 
Sbjct: 714  VRSAVHGSPAVMAFSSRTWLLYTYQDLLQTQPLIYDMLEYACNLSAAMCPDGLIGISGNT 773

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFE 816
            LR+FTI RLG    + ++PL YTPR+FV  P   +   IE D    +A+  E A +E   
Sbjct: 774  LRIFTIPRLGTKLKQDSMPLSYTPRKFVSYPYNTVFYGIEADHRVWSAQAMEKATEE--- 830

Query: 817  AAGMGENGNGNMDQMENGDDEN-KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL 875
                         +   GD++      L   ++G  +A +  W S IRV+DP    T   
Sbjct: 831  -------------KKREGDEKALAVLELPPAEFGRVRAPAGHWGSLIRVIDPLQNTTLQT 877

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            LEL ++EAAFS+    F        L VGT       PK     G++ +Y   +EGK LE
Sbjct: 878  LELDEDEAAFSLAVCYFERMGGEPSLVVGTGVKTTLMPK-GCKEGWLRVYAIRDEGKRLE 936

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
             +HKT+ + +PLA+  FQG LLAG+G  LRLY++GKK LLRKCEN  FP  + +IN    
Sbjct: 937  FMHKTKTDDVPLAVAAFQGYLLAGVGKSLRLYEMGKKALLRKCENNGFPTGVATINVVGA 996

Query: 996  RIYVGDIQESFHFCKYRR-DENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            RI VGD+QES  +C YR     QL IFADDS PR+LTA  ++D+DT+  ADKFGNI+  R
Sbjct: 997  RIIVGDLQESTFYCVYRSIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGNIFVNR 1056

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESV 1114
            L + VS+++++DPTG  I  E+G L G+ NK + I  ++VG VVTSL K S+ PGG + V
Sbjct: 1057 LEERVSEKVDDDPTGAVILHEKGFLMGSANKTDLIAHYNVGSVVTSLTKVSVAPGGRDVV 1116

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGD 1174
            +Y T+ G++GA++ F S DDV+F + LEMH+R  +  L GRDH+AYR  Y PVK V+DGD
Sbjct: 1117 VYTTISGAVGALVPFISNDDVEFMTTLEMHIRSLNTSLVGRDHLAYRGYYAPVKAVVDGD 1176

Query: 1175 LCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            LCE F  L    Q+ IA +LDR  GE+LKKLE++R   V
Sbjct: 1177 LCESFNMLPYPQQQAIAADLDRNVGEVLKKLEQLRTGSV 1215


>gi|170580631|ref|XP_001895346.1| splicing factor 3B subunit 3 [Brugia malayi]
 gi|158597745|gb|EDP35799.1| splicing factor 3B subunit 3, putative [Brugia malayi]
          Length = 1181

 Score = 1145 bits (2962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1233 (48%), Positives = 807/1233 (65%), Gaps = 77/1233 (6%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGT-KTPEIVVARGKVLELLRPE-NSGRIETLVSTEIF 58
            MYLY+LTLQ  + I  AI+G+F G  K  E+ +ARG +L+LL  +  +G+I  L S   F
Sbjct: 1    MYLYNLTLQGSSAINQAIHGSFCGLPKQQEVCIARGNLLQLLFCDPKTGKIHVLCSHNAF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G IRSL  FRLTG  KDYIV+GSD+GRIVILEYN  K  F+++HQETFGK+GCRRIVPGQ
Sbjct: 61   GIIRSLLAFRLTGGSKDYIVIGSDAGRIVILEYNAQKVCFERVHQETFGKTGCRRIVPGQ 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            +LAVDPKGRA++IGA E+QKLVY++NRD +A LTISSPLEAHKSH I YS+ G+D GF+N
Sbjct: 121  FLAVDPKGRAILIGAVERQKLVYIMNRDASANLTISSPLEAHKSHCICYSVVGVDVGFEN 180

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P FA +E+DY E D D TG  A++  + LTFYELDL                      VP
Sbjct: 181  PTFACLEVDYEEVDHDPTGHLATKIPQTLTFYELDL----------------------VP 218

Query: 239  GGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLF 295
            GG DGPSGV+VC EN+++YKN G  PD++  +PRR +     +R V+IV +ATH+ K ++
Sbjct: 219  GGQDGPSGVIVCCENYLVYKNLGDQPDIKCPVPRRRNELDDCDRTVIIVCSATHKTKLMY 278

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            FFL+QT+ GDIFKVTLE +++ V+ELKIKYFDTIPV+ +MC+LK+G+LF ASEFGNH LY
Sbjct: 279  FFLVQTDQGDIFKVTLESEHDIVTELKIKYFDTIPVSNAMCILKTGFLFTASEFGNHHLY 338

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIM--DMRIANL 413
            Q   +G D D E   S+ M+ EEG +  FF PRGL NL  ++Q++SL P++    R    
Sbjct: 339  QIAHLG-DEDDEPEFSSRMQLEEG-ETFFFAPRGLTNLAIVDQMDSLSPLIFFPTRTRCT 396

Query: 414  FEEEA-PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            F  ++  Q F   G+    SL  L                +P+AVWTVK+N++D+FD++I
Sbjct: 397  FSSQSIAQWFG--GKRKWLSLNCLV---------------IPNAVWTVKRNIDDKFDSHI 439

Query: 473  VVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED---- 528
            VVSF NATLVLSIGETVEEV+DSGFL TTP+L  +LIGDD+L       IR + +     
Sbjct: 440  VVSFVNATLVLSIGETVEEVTDSGFLGTTPTLGCALIGDDALC------IRTVFDILGLI 493

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACL 587
            G +   R      ++K   NR QV IAL+GGEL+YFE+D+TGQL E  E+ E+  DV C+
Sbjct: 494  GELMSGRHLVNVQLLKCALNRRQVAIALAGGELVYFELDVTGQLNEYTERRELPADVLCM 553

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL-----SVQSVSSPPESLLFLEV 642
             ++ +PEG  RSRFL VG  D T+RI+SLDP DC+  L     S+Q++ S PES++ LE+
Sbjct: 554  SLSEIPEGELRSRFLTVGLADKTVRIISLDPQDCLSPLQLISFSMQALPSEPESIIVLEM 613

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
                G E      +++ LN GLQNG L RT VD VTG+L+D+R+R+LG +  KLF V + 
Sbjct: 614  ---FGTE--TQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKLFRVRIQ 668

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
             + A++  SSR WL Y ++ RF LTPLSY  LE+AA FSS+QC EG+V++A N LR+ ++
Sbjct: 669  SKDAIMAASSRAWLLYDYQSRFHLTPLSYAALEFAAGFSSEQCPEGIVAIAENTLRILSL 728

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTA----EEREAAKKECFEAA 818
            E+LG  FN    PL YTPRR V+      ++IIE D  A T     E R+    E  E A
Sbjct: 729  EKLGAVFNHVVHPLDYTPRRMVVHKASGNLIIIENDHAAFTVKGKMERRKQLADELMEVA 788

Query: 819  GMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLEL 878
               E  +     ++   D  + + + +  YG PK +  KW S +R++      T      
Sbjct: 789  KEAEEAD--QQAVKEMADAIRTEKVDERVYGSPKNQKGKWASTVRIMRSNDGETLSHFPF 846

Query: 879  QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
             ++EAAF+I  V F ++     + VG    LQ  P R    G I+ +     G +L+LLH
Sbjct: 847  AEDEAAFAIAMVQFQNQSDTQFVLVGCGCDLQLKP-RKANGGCIYTFLLAANGTTLQLLH 905

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            +T  + +  A+  F+G  LAG+G  +RLYDLGK++LL KCEN+  P  +V I +   RI 
Sbjct: 906  RTPTDEVVNAIHDFRGMALAGVGKKVRLYDLGKRKLLAKCENRQIPTQVVDIRSMGQRIV 965

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            V D QES HF +Y++ + QL IF D++ PR++T    +D+DT+A  D+FGN+  +RLP+ 
Sbjct: 966  VSDSQESVHFMRYKKQDGQLSIFCDETSPRYVTCVCLLDYDTVAVGDRFGNVAVLRLPKG 1025

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            V++E++EDPTG +  W++G LNGA  K+E I   ++GD +TS+QK SLVPG  + + Y T
Sbjct: 1026 VTEEVQEDPTGVRALWDRGNLNGASQKLEAIAHLYIGDAITSMQKTSLVPGANDCLSYTT 1085

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            + G +G ++ F SRD+ +FF +LEMHMR E+PPLCGRDH+AYRS YFPVK VIDGDLCEQ
Sbjct: 1086 ISGIIGILVPFMSRDEFEFFQNLEMHMRVEYPPLCGRDHLAYRSYYFPVKSVIDGDLCEQ 1145

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +  + LD Q+ + +EL R P EI KKLE+IR +
Sbjct: 1146 YSLMPLDKQKSVGEELGRKPTEIHKKLEDIRTR 1178


>gi|401883281|gb|EJT47496.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 2479]
          Length = 1216

 Score = 1145 bits (2962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/1239 (48%), Positives = 816/1239 (65%), Gaps = 50/1239 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLRPE-NSGRIETLVSTEIF 58
            M+L +LTLQ  T + AA  G+FSG K  EI+  RG   LE+L+   ++G+++++ S+E F
Sbjct: 1    MHLLNLTLQPATSVTAAAVGSFSG-KGQEILAVRGSTRLEILKLNPSTGQLDSICSSEAF 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY--NPSKNVFDKIHQETFGKSGCRRIVP 116
            G +R++A FRL G  KDYIV+ SDSGR+ I+E   +P+ + F+ ++QE +GKSG RR +P
Sbjct: 60   GTVRNVAAFRLAGMGKDYIVLSSDSGRLSIIELVISPTPH-FESLYQEVYGKSGSRRTIP 118

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            GQ+LAVDPKGR+ M GA EKQKL Y+LNR+T  ++  SSPLEAHK+HT+V ++   D G+
Sbjct: 119  GQFLAVDPKGRSAMFGAVEKQKLCYILNRNTEGKVYPSSPLEAHKNHTLVVNMIACDTGY 178

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVT 236
            DNP+FAA+ELDY ++D D+TG+A   A+K+LTFYELDLGLNHV RKWSEP D  AN+LV 
Sbjct: 179  DNPMFAALELDYGDSDHDATGEAYRAAEKHLTFYELDLGLNHVVRKWSEPTDRRANLLVQ 238

Query: 237  VPGGG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE-----RGVLIV 284
            VPGG        DGP GVLVC E++VI+K+      R  IPRR +  A+     RG++IV
Sbjct: 239  VPGGQNANTDRFDGPGGVLVCTEDYVIWKHMDAEAHRVPIPRRRNPMAKPGQSSRGIIIV 298

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
            +A TH+ K  FFFLLQ+E GD+FK T+EH+ E V  L+IKYFDT+PV  S+C+LKSGYLF
Sbjct: 299  AAVTHKIKGSFFFLLQSEDGDLFKATIEHEGEDVRALRIKYFDTVPVATSLCILKSGYLF 358

Query: 345  AASEFGNHALYQFQAIGADPDVEASSST----LMETEEGFQPVFFQPRGLKNLVRIEQVE 400
             ASEFG+  LYQFQ++  D      SST        EE     FFQPR L+NL+  + + 
Sbjct: 359  VASEFGDQGLYQFQSLADDDGEREWSSTDYPGFGLGEEHLPYAFFQPRPLQNLLLADTLS 418

Query: 401  SLMPIMDMRIANLF--EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVW 458
            SL PI+D ++ NL     + PQI+  CGRGPRS+ R L+ GL ++ +  S LPGVP+AVW
Sbjct: 419  SLDPILDAQVVNLLGNASDTPQIYAACGRGPRSTFRSLKHGLDINVLVESPLPGVPNAVW 478

Query: 459  TVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            T+K + +DE+D+YIV+SF N TLVLSIGET+EEV+D+GFL + P+LAV  +G   L+QVH
Sbjct: 479  TLKLSEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGSAGLLQVH 538

Query: 519  PSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EK 577
            P+G+RHIR   R++EW  P   TIV   +N+ QVVIALS  EL+YFE+D  G L E  E+
Sbjct: 539  PAGLRHIRAADRVDEWNAPAGTTIVSATTNKNQVVIALSTQELVYFELDEEGSLNEYQER 598

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
              + G+  C+ IA VPEGR+R+ +LAVG  + T+ I+SL+PD+ ++ LS+Q++++PP  +
Sbjct: 599  KSLPGNATCVSIADVPEGRRRTPYLAVGCDNQTVHIISLEPDNTLETLSLQALTAPPSDI 658

Query: 638  LFLEV-QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
               E+   S+       + A++FL  GL NGVL RTVVD V G LSD+R RFLG +PP++
Sbjct: 659  CLAEIFDTSID-----KNRATMFLTIGLLNGVLLRTVVDPVDGSLSDTRLRFLGSKPPRI 713

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                V G  A++  SSR WL Y ++      PL Y+ LEYA + S+  C +G++ ++GN 
Sbjct: 714  VRSAVHGSPAVMAFSSRTWLLYTYQDLLQTQPLIYDMLEYACNLSAAMCPDGLIGISGNT 773

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFE 816
            LR+FTI RLG    + ++PL YTPR+FV  P   +   IE D    +A+  E A +E   
Sbjct: 774  LRIFTIPRLGTKLKQDSMPLSYTPRKFVSYPYNTVFYGIEADHRVWSAQAMEKATEE--- 830

Query: 817  AAGMGENGNGNMDQMENGDDEN-KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL 875
                         +   GD++      L   ++G  +A +  W S IRV+DP    T   
Sbjct: 831  -------------KKREGDEKALAVLELPPAEFGRVRAPAGHWGSLIRVIDPLQNTTLQT 877

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            LEL ++EAAFS+    F        L VGT       PK     G++ +Y   +EGK LE
Sbjct: 878  LELDEDEAAFSLAVCYFERMGGEPSLVVGTGVKTTLMPK-GCKEGWLRVYAIRDEGKRLE 936

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
             +HKT+ + +PLA+  FQG LLAG+G  LRLY++GKK LLRKCEN  FP  + +IN    
Sbjct: 937  FMHKTKTDDVPLAVAAFQGYLLAGVGKSLRLYEMGKKALLRKCENNGFPTGVATINVVGA 996

Query: 996  RIYVGDIQESFHFCKYRR-DENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            RI VGD+QES  +C YR     QL IFADDS PR+LTA  ++D+DT+  ADKFGNI+  R
Sbjct: 997  RIIVGDLQESTFYCVYRSIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGNIFVNR 1056

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESV 1114
            L + VS+++++DPTG  I  E+G L G+ NK + I  ++VG VVTSL K S+ PGG + V
Sbjct: 1057 LEERVSEKVDDDPTGAVILHEKGFLMGSANKTDLIAHYNVGSVVTSLTKVSVAPGGRDVV 1116

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGD 1174
            +Y T+ G++GA++ F S DDV+F + LEMH+R  +  L GRDH+AYR  Y PVK V+DGD
Sbjct: 1117 VYTTISGAVGALVPFISNDDVEFMTTLEMHIRSLNTSLVGRDHLAYRGYYAPVKAVVDGD 1176

Query: 1175 LCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            LCE F  L    Q+ IA +LDR  GE+LKKLE++R   V
Sbjct: 1177 LCESFNMLPYPQQQAIAADLDRNVGEVLKKLEQLRTGSV 1215


>gi|392580116|gb|EIW73243.1| hypothetical protein TREMEDRAFT_37240 [Tremella mesenterica DSM 1558]
          Length = 1214

 Score = 1143 bits (2956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1235 (47%), Positives = 811/1235 (65%), Gaps = 50/1235 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLRPENS-GRIETLVSTEIF 58
            M+L+++TLQ PT +  A  G+FSGTK  EI+V RG   LE+L+   S G+++T+ + E F
Sbjct: 1    MHLFNITLQPPTNVTLAAVGSFSGTKGQEILVVRGGTRLEILKLNTSTGQLDTICTAEAF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY--NPSKNVFDKIHQETFGKSGCRRIVP 116
            G +RS+A FRL G  KDYI++ SDSGR+ I+E+   P+ + F+ ++QE FGKSG RR+VP
Sbjct: 61   GTVRSVAGFRLAGMTKDYILLSSDSGRMSIIEFVVTPTPH-FESLYQEVFGKSGSRRVVP 119

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            GQ+LAVDPKGR+ M  A    KLVYVLNR++  +L  SSPLEAHK+H ++  + G+D G+
Sbjct: 120  GQFLAVDPKGRSCMFAA---SKLVYVLNRNSEGKLFPSSPLEAHKNHALITHVIGVDQGY 176

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVT 236
            DNP++AA+E+DYSE+D+D TG A   A+K+L FYELDLGLNHV RKWSEP D  AN+LV 
Sbjct: 177  DNPLYAALEVDYSESDEDPTGAAFEAAEKHLVFYELDLGLNHVVRKWSEPTDRRANLLVQ 236

Query: 237  VPGGGD-------GPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERG-----VLIV 284
            VPGG +       GPSGVLVC E+ VI+K+      R  IPRR +  A+RG     ++IV
Sbjct: 237  VPGGQNATSDRFEGPSGVLVCCEDHVIWKHMDAEAHRVPIPRRRNPLAQRGEISRGMIIV 296

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
            SA  H+ +  FFFLLQ E GD++K+ ++H  E V  +KIKYFDT+PV+ S+C+LKSGYLF
Sbjct: 297  SAVMHKIRGAFFFLLQNEDGDLYKLWIDHQGEDVVAVKIKYFDTVPVSNSLCILKSGYLF 356

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLM----ETEEGFQPVFFQPRGLKNLVRIEQVE 400
            AASEFG+  LYQFQ +  D D +  SST       T       FF PR L+NL+ ++ + 
Sbjct: 357  AASEFGDQNLYQFQNLAEDDDEQEWSSTDYPDNGNTTGALPYAFFNPRPLQNLLLVDTLS 416

Query: 401  SLMPIMDMRIANLF--EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVW 458
            SL PI+D ++ NL     + PQI+  CGRGPRS+ R L+ GL + ++  S LPGVP+AVW
Sbjct: 417  SLDPILDAQVVNLLGQSSDTPQIYAACGRGPRSTFRTLKHGLEIQQIVASPLPGVPNAVW 476

Query: 459  TVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            T+K    DEFD+YIV+SF N TLVLSIGET+EEV+D+GFL + P+LAV  +GD  L+QVH
Sbjct: 477  TLKLTEEDEFDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGDAGLLQVH 536

Query: 519  PSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-K 577
            P G+RHIR   R++EW  P    I    +N+ QVVIALS  EL+YFE+D  G L E + K
Sbjct: 537  PYGLRHIRAADRVDEWACPPGSAITAATTNKRQVVIALSTAELVYFELDPEGSLSEYQDK 596

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
              + G+  C+ IA VPEGR+R+ FLAVG  + T+ ++SL+P+  +  LS+Q++++PP S+
Sbjct: 597  KSLPGNATCVSIAEVPEGRRRTPFLAVGCDNQTVHVISLEPESTLTTLSLQALTAPPASI 656

Query: 638  LFLEV-QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
               E+   S+       + A++FLN GL NGVL RTVVD V G LSD+R RFLG +PPKL
Sbjct: 657  CLAEIFDTSID-----KNRATMFLNIGLMNGVLLRTVVDPVEGSLSDTRLRFLGAKPPKL 711

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                + G  +++  SSR WL Y ++      PL Y+ LEYA++ S+  C EG++ ++GN 
Sbjct: 712  VRSSIHGSPSVMAFSSRAWLLYTYQDMLQTQPLIYDALEYASTLSAAMCPEGLIGISGNT 771

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFE 816
            LR+FTI RLGE   + ++ L YTPR+F+  P   +  +IE+D   L  +   A ++   +
Sbjct: 772  LRIFTIPRLGEKLKQDSMSLTYTPRKFISHPFSTIFYMIESDHRVLGPK---AIQRIVSQ 828

Query: 817  AAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLL 876
                G+  +G++ +            L   ++G P+A    W S IR+LDP +  T   +
Sbjct: 829  KKAAGDRVDGSILE------------LPPSEFGRPRAGPGHWASLIRILDPLTNQTVSTI 876

Query: 877  ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLEL 936
            EL ++EAAFS+    F +      L VGTA      P R    G++ +Y   E G++LE 
Sbjct: 877  ELDEDEAAFSLTIAYFENMAGEPSLVVGTAVKTTLTP-RGCKEGWLRVYAIKENGRTLEF 935

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDR 996
            +HKT+++ IPL +  FQG LL G G  LRLY+ GKK LLRKCEN  FP  I +IN    R
Sbjct: 936  MHKTKLDEIPLCVAGFQGYLLVGAGKSLRLYEAGKKALLRKCENNSFPTVIATINVIGAR 995

Query: 997  IYVGDIQESFHFCKYRR-DENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            I VGD+QES  FC YR     QL +F DD+ PR+LT   ++D+DT+A  DKFGN++  R+
Sbjct: 996  IIVGDMQESTFFCVYRSIPTRQLLVFGDDTQPRFLTCVTNVDYDTVACGDKFGNVFVNRM 1055

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
             Q VS+++++DPTG  I  E+G L GA +K   I  + VG VVTSL K SLVPGG + ++
Sbjct: 1056 DQAVSEKVDDDPTGAGILHEKGFLMGAAHKTTLIAHYQVGSVVTSLTKVSLVPGGRDVLV 1115

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDL 1175
            Y T+ G++GA++ F S DDV+F + LEMHMR ++  L GRDH+AYR  Y PV  V+DGDL
Sbjct: 1116 YTTISGAVGALVPFISMDDVEFMTTLEMHMRSQNISLVGRDHLAYRGYYAPVMGVVDGDL 1175

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            C+ + +L    Q  IA+ELDR+ G++LKKLE++R 
Sbjct: 1176 CDAYSSLPYTKQSSIANELDRSVGDVLKKLEQMRT 1210


>gi|297816810|ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322126|gb|EFH52547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 633

 Score = 1141 bits (2952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/628 (85%), Positives = 597/628 (95%), Gaps = 3/628 (0%)

Query: 589  IASVPEGRKRSR--FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
            +A +   R++++   LAVGSYDNT+RILSLDPDDC+QILSVQSVSS PESLLFLEVQAS+
Sbjct: 6    LADIALFRRKTKVSLLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASI 65

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
            GGEDGADHPA+LFLN+GLQNGVLFRTVVDMVTGQLSDSRSRFLGL+PPKLFS+ V GR+A
Sbjct: 66   GGEDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSA 125

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
            MLCLSSRPWLGYIHRG F LTPLSYETLE+AA FSSDQC EGVVSVAG+ALR+F I+RLG
Sbjct: 126  MLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLG 185

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
            ETFNET +PLRYTPR+FVLQPK+KL+VIIE+DQGA TAEEREAA+KECFEA G+GENGNG
Sbjct: 186  ETFNETVVPLRYTPRKFVLQPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNG 245

Query: 827  NMDQMENG-DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
            N DQMENG DDE+K DPLSDEQYGYPKAES+KWVSCIRVLDP++A TTCLLELQDNEAA+
Sbjct: 246  NADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAY 305

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            S+CTVNFHDKE+GTLLAVGT KG+QFWPK+N+VAG+IHIYRFVEEGKSLELLHKTQVEG+
Sbjct: 306  SVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEEGKSLELLHKTQVEGV 365

Query: 946  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQES 1005
            PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI+SI TYRDRIYVGDIQES
Sbjct: 366  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQES 425

Query: 1006 FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE 1065
            FH+CKYRRDENQLYIFADD VPRWLTA+HH+DFDTMAGADKFGN+YFVRLPQD+S+EIEE
Sbjct: 426  FHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEE 485

Query: 1066 DPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGA 1125
            DPTGGKIKWEQGKLNGAPNK++EIVQFHVGDVVT LQKAS++PGG ES++YGTVMGS+GA
Sbjct: 486  DPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGA 545

Query: 1126 MLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLD 1185
            + AF+SRDDVDFFSHLEMHMRQE+PPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL +D
Sbjct: 546  LHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMD 605

Query: 1186 LQRKIADELDRTPGEILKKLEEIRNKIV 1213
            LQRKIADELDRTP EILKKLE+ RNKI+
Sbjct: 606  LQRKIADELDRTPAEILKKLEDARNKII 633


>gi|342885857|gb|EGU85809.1| hypothetical protein FOXB_03657 [Fusarium oxysporum Fo5176]
          Length = 1189

 Score = 1141 bits (2952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/1232 (47%), Positives = 813/1232 (65%), Gaps = 73/1232 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT +  A+ G F+GT+   I+ A G  L LLRP+ S G++ TL+S ++FG
Sbjct: 7    MFLYSLTVQPPTNVTQAVLGQFAGTREQLIITAAGSQLSLLRPDPSQGKVITLLSHDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRSLA FRL GS KDY+++ SDSGRI I+EY P++N F ++H ETFGKSG RR++PG+Y
Sbjct: 67   IIRSLAAFRLAGSNKDYLIIASDSGRITIIEYLPAQNRFHRLHLETFGKSGVRRVIPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK   +V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYSNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DYSE DQDSTGQA  E    L +YELDLGLNHV RKWS+PVD  A++L  VPG
Sbjct: 187  VFAALEIDYSEIDQDSTGQAMEELDTQLVYYELDLGLNHVVRKWSDPVDPTASILFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  IPRR  A     R   IVS   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENITYRHSNQEAFRVAIPRRRGATEDPNRKRTIVSGIMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQT+ GD+FK++++   D E      V  LKIKYFDT+PV +S+C+LKSG+L+ AS
Sbjct: 307  FFFLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKIKYFDTVPVASSLCILKSGFLYVAS 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN++ YQF+ +G  D ++E  S     +    ++PV+F PR  +NL  +E + ++ P+
Sbjct: 367  QFGNYSFYQFEKLGDDDEELEFYSDDFPADPRASYEPVYFHPRPTENLALVESIPAMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T+CG GPRSS R+L+ GL V+E+  S+LPG+PSAVWT+K N +
Sbjct: 427  LDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWTLKLNRS 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +++DAYIV+SF N TLVLSIGETVEEVSDSGFL + P+LA  L+GDD L+QVHP GIRH+
Sbjct: 487  EQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHV 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G +NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGHVNEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D T+RILSLDP+  ++  SVQ++++ P SL      A
Sbjct: 606  TCLSLGDVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  +D +   ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +  +LF V V G+
Sbjct: 660  IIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKEVRLFQVTVQGK 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   I +G F++TPL+Y  LE+  +FSS+QC EG+V + G +LR+F 
Sbjct: 720  TCVLGLSSRPWLGYADPITKG-FVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFN 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I+RLG+T  + ++PL YTP++ V  P + L   IE D   L  E R     +        
Sbjct: 779  IDRLGDTLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLAD-------- 830

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
                    ++ NGD       L  E +GYPK  + +W SCI V+DP S     +  ++L+
Sbjct: 831  -------PKIVNGDSR----VLPPEDFGYPKG-TRRWASCINVIDPLSEEGQVVQTIDLE 878

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V+F  +++ + L VGT K +   P R+   GY+HIYRF + G++L LL  
Sbjct: 879  NNEAAVSAAIVSFSSQDNESFLVVGTGKDMVVNP-RSYSEGYLHIYRFQDGGENLTLL-- 935

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
                        FQGR+   +G  LR+YDLG +++LRK + ++    IVS+NT   RI V
Sbjct: 936  -----------AFQGRVAVAVGTQLRIYDLGMRQMLRKSQAEVAAQQIVSLNTQGSRIIV 984

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+Q+   +  Y+   N+L  F DD++ RW T    +D++++AG DKFGN++ VR P+  
Sbjct: 985  GDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKA 1044

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S+E +E+ TG  +   +  L+G P++          D+ TS+ K SLV GG E +++  +
Sbjct: 1045 SEEADEEQTGLHLINAREYLHGTPHR----------DIPTSITKTSLVVGGQEILLWSGI 1094

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            MG++G  + F SR+D DFF +LE H+R E PPL GRDH+ YR  Y PVK VIDGDLCE++
Sbjct: 1095 MGTIGVFIPFISREDADFFQNLEQHLRTEDPPLAGRDHLMYRGYYAPVKGVIDGDLCERY 1154

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              L  D +  IA ELDR+  EI +K+ +IR +
Sbjct: 1155 NLLPNDKKLMIAGELDRSVREIERKISDIRTR 1186


>gi|74190887|dbj|BAE28225.1| unnamed protein product [Mus musculus]
          Length = 937

 Score = 1127 bits (2916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/950 (59%), Positives = 718/950 (75%), Gaps = 29/950 (3%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1   MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61  VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121 LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181 MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240 GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
           G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241 GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           FFL QTE GDIFK+TLE D + V+E++IKYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300 FFLAQTEQGDIFKITLETDEDMVTEIRIKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
           Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360 QIAHLG-DDDEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
           E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418 EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476 FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
           F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478 FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536 TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
           TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538 TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595 GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
           G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E    +GG +  D 
Sbjct: 598 GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVE----MGGTEKQDE 653

Query: 655 PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                    L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654 LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709 CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
            +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714 AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769 FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENG 824
           FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E  
Sbjct: 774 FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERE 833

Query: 825 NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
               +      +EN    L +  +G PKA + +W S IRV+ P   NT  L++L+ NEAA
Sbjct: 834 LA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMSPIQGNTLDLVQLEQNEAA 888

Query: 885 FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
           FS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ L
Sbjct: 889 FSVAVCRFSNTGEDWYVLVGVAKDLILSP-RSVAGGFVYTYKLVNNGEKL 937


>gi|291000406|ref|XP_002682770.1| predicted protein [Naegleria gruberi]
 gi|284096398|gb|EFC50026.1| predicted protein [Naegleria gruberi]
          Length = 1216

 Score = 1123 bits (2904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 591/1247 (47%), Positives = 814/1247 (65%), Gaps = 70/1247 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTK----------TPEIVVARGKVLELLRPENSGRIE 50
            M+LY  TL +P  I  AI+G FSG K            EIV+A+G +LEL   E +G ++
Sbjct: 1    MHLYHFTLVKPGSINQAISGCFSGKKYDILTEKHYRPTEIVMAKGNILELYECEENGNLK 60

Query: 51   TLVSTEIFGAIRSLAQFRLTGS-QKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKS 109
             L+S ++FG IRS+  F+ + + +KDYI +GSDSG IVILE N + N F +IH ET+GK+
Sbjct: 61   CLISQDVFGVIRSITSFKFSNTVEKDYIAIGSDSGSIVILEVNSNLNKFTQIHHETYGKT 120

Query: 110  GCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSI 169
            GCRRIVPGQYLA DPKGRA+MIGA EKQK VYVLN D    LTISSPLE H  +T+VYS+
Sbjct: 121  GCRRIVPGQYLAADPKGRALMIGAVEKQKFVYVLNMD-GDHLTISSPLEGHSQNTLVYSM 179

Query: 170  CGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDN 229
             G+D GFDNP FA IE++Y  AD+     A    +K LT YELDLG N + +K SE +D 
Sbjct: 180  VGLDVGFDNPAFACIEVNYEGADESDV--AYQSLKKMLTIYELDLGKNTIVKKSSEEIDR 237

Query: 230  GANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH 289
             AN+L+ +P   +   GVLVC+EN++ YK +G  DVR+ IPRR+ +P ERG++I+++   
Sbjct: 238  SANLLIQIP---EPLGGVLVCSENYITYKKEGQDDVRSPIPRRSGMPQERGLMIINSNLK 294

Query: 290  RQKTLFFFLL-QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
             +K    FLL Q E GD+++V+   D   VS + ++YFDTIPV+ S   LK+G LF ASE
Sbjct: 295  VKKGGDIFLLAQNELGDLYRVSFNKDGNRVSSVSLQYFDTIPVSNSFLALKNGNLFCASE 354

Query: 349  FGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKN------------LVRI 396
            FG+H  Y+   I  +   E   S   ET   F P   +   L +            L  +
Sbjct: 355  FGDHKCYKITKIEPNEYPETYESIGSETFPTFTPPMNRFEALMSDNDQPSTTNVTCLELV 414

Query: 397  EQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSA 456
             +++SL P+ DM++ +L  E  PQI+ L GRGP SSLR LR GL V+E   + L    +A
Sbjct: 415  NEIKSLAPVTDMKVTDLMGEGTPQIYCLNGRGPTSSLRSLRYGLPVNEEVAAPLDQQATA 474

Query: 457  VWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDD-SLM 515
            ++TVK+++ND FD YI++SF+  T+VLS+GE V EV++SGFL TT ++  S IG+    +
Sbjct: 475  IFTVKESMNDTFDKYIILSFSEFTMVLSVGENVAEVTESGFLTTTKTIYASNIGESGEFV 534

Query: 516  QVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT-GQLLE 574
            QVHP GIRHI  D R+NEW + G + I K   N  Q+V++LSGGE+IYFE D + G L+E
Sbjct: 535  QVHPKGIRHIHPD-RVNEWNS-GNKIIEKAAVNGYQIVVSLSGGEIIYFEYDTSSGNLIE 592

Query: 575  VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPP 634
             E++++S DVACL ++ + +GR R RFLAVG YD T+R++SL   D M ILS Q++ + P
Sbjct: 593  TERNDLSQDVACLALSPIQDGRTRGRFLAVGFYDKTVRLISLGEYDMMSILSRQALPADP 652

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
            ESL  +E+Q+    ++      SL+LN GL NG+L R+ VD  TG+LSD+RSRFLG +  
Sbjct: 653  ESLSLIELQSGHSRDE-----TSLYLNIGLSNGILLRSTVDSSTGELSDTRSRFLGTKGV 707

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
            KL +V V G  A+L LSS+PWLG    G+  +TPLSY  L  A +FSS+Q  +G+VS+  
Sbjct: 708  KLRNVKVRGDNAILALSSKPWLGNSINGKIEMTPLSYPALNSACNFSSEQIRDGLVSITA 767

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
              LR+ TI  L + F    +PL YTPR+FV+  +   M+I++TD     ++E    + + 
Sbjct: 768  EHLRIITISSLLDKFTPEIIPLNYTPRKFVVHDETSHMIILQTDHNV--SKENSTDRPDY 825

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDP-LS-DEQYG--YPKAESDKWVSCIRVLDPRSA 870
             +                   DE++ DP LS D +YG    K +S+ W S IRV  P+  
Sbjct: 826  IKV------------------DESQKDPSLSKDVEYGAIKTKPKSNLWASYIRVYSPKKQ 867

Query: 871  NTTCLLELQDNEAAFSICTVNFHD-----KEHGTLLAVGTAKGLQFWPKRNIVAGYIHIY 925
                  E++DNEAAFSI T  F       K + +L+ VGTAK ++ +P R    GYI+++
Sbjct: 868  ANLDEFEIEDNEAAFSITTCKFSTSLSGAKSNESLIIVGTAKNMKLYPTRTCDCGYINVF 927

Query: 926  RFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPN 985
            +  E+GK L+L+HKT+VE +P AL  F+GRLL G+  +LR+YDLGKK+LLRKCENK FPN
Sbjct: 928  QISEDGK-LQLIHKTEVEDVPYALHAFRGRLLVGVKNMLRIYDLGKKKLLRKCENKSFPN 986

Query: 986  TIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD 1045
             I SI    +RI+VGDI ESFHF K+   EN L IFAD++ PRWLTA+  +D +T+AG D
Sbjct: 987  FITSIAVDGNRIFVGDITESFHFVKFNSSENSLTIFADNTTPRWLTASALVDHNTIAGGD 1046

Query: 1046 KFGNIYFVRLPQDVSDEIEEDPTGG-KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKA 1104
            KFGN +  RLP DVSDE+E+  TG  K  WE+G LNGAP K  EIV+F+VG ++TS+ K 
Sbjct: 1047 KFGNFFISRLPSDVSDELEDSSTGKEKWIWERGLLNGAPQKATEIVKFYVGSMITSIYKT 1106

Query: 1105 SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY 1164
            SL+ GG   +IY T+ G++G    F+S+ D++FF+ LEMH+R+++PPLCGRDH+AYRS Y
Sbjct: 1107 SLIAGGPSILIYTTITGAVGVFFPFTSKKDIEFFTQLEMHLREKNPPLCGRDHLAYRSYY 1166

Query: 1165 FPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            FPVK V+DGDL EQF  + L  + KI+++L RT  EI KK+E+++N+
Sbjct: 1167 FPVKSVVDGDLIEQFNDVDLQTKTKISEDLQRTINEIAKKIEDMKNQ 1213


>gi|134106833|ref|XP_777958.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50260658|gb|EAL23311.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1218

 Score = 1122 bits (2903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/1245 (47%), Positives = 804/1245 (64%), Gaps = 66/1245 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLR-PENSGRIETLVSTEIF 58
            M+L +LTL  PT +  A+ G+FSG+K+ EI+  RG   LE+ +    +G+++T+VSTE F
Sbjct: 1    MHLLNLTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAF 60

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY--NPSKNVFDKIHQETFGKSGCRRIVP 116
            G IR++A FRL G  KDYI+  SDSGR+ ILE+  +P+ + F+ ++QE FGKSG RRIVP
Sbjct: 61   GTIRNIAGFRLAGMTKDYILATSDSGRLSILEFVISPTPH-FESLYQEVFGKSGSRRIVP 119

Query: 117  GQYLAVDPKGRAVMIGACE-----KQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICG 171
            GQ+LAVDPKGR+ ++G+ E     + KLVYVLNR+T  +L  SSPLEAHK+HT+V  I G
Sbjct: 120  GQFLAVDPKGRSCLVGSLENAIAVRTKLVYVLNRNTEGKLYPSSPLEAHKNHTLVTHIVG 179

Query: 172  IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGA 231
            +D G+DNP++AA+E DYSE+DQDSTG+A    QK+LTFYELDLGLNHV RKWSEP D  A
Sbjct: 180  VDQGYDNPLYAALETDYSESDQDSTGEAYENTQKHLTFYELDLGLNHVVRKWSEPTDRRA 239

Query: 232  NMLV---TVPGGGD-------GPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERG- 280
            N+LV    VPGG +       GPSGVLVC E+ +I+K+      R  IPRR +   +RG 
Sbjct: 240  NLLVQALKVPGGQNANSDRFEGPSGVLVCTEDHIIWKHMDVEAHRIPIPRRRNPLVQRGD 299

Query: 281  ----VLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMC 336
                ++IVSA  H+ K  FFFLLQ+E GD++KV +EH+ E V  LKIKYFDT+PV  S+C
Sbjct: 300  KSRGLIIVSAVMHKIKGAFFFLLQSEDGDLYKVWIEHNGEDVVALKIKYFDTVPVANSLC 359

Query: 337  VLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETE---EGFQP-VFFQPRGLKN 392
            +LK GY++ ASEF +  LYQFQ++  D   +  SST        +G  P  FF P+ L+N
Sbjct: 360  ILKRGYIYVASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNIDGPLPFAFFDPQPLRN 419

Query: 393  LVRIEQVESLMPIMDMRIANLF--EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
            L+ ++ V SL PI D  + NL     + PQI+  CGRG RS+ R L+ GL V+EM  S L
Sbjct: 420  LLLVDTVPSLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMVSSPL 479

Query: 451  PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
            PGVP+ VWT+K   +       V+SF N TLVLSIGET+EEV+D+GFL + P+LAV  +G
Sbjct: 480  PGVPTNVWTLKLTED-------VLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLG 532

Query: 511  DDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG 570
            +  L+QVHP G+RHIR   R++EW  P  +TIV   +NR QVVIALS  EL+YFE+D  G
Sbjct: 533  NAGLLQVHPYGLRHIRAADRVDEWPAPPGQTIVAATTNRRQVVIALSTAELVYFELDPEG 592

Query: 571  QLLEV-EKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQS 629
             L E  EK  + G+  C+ IA VPEGR+R+ FLAVG  + T+ I+SL+PD  +  LS+Q+
Sbjct: 593  SLSEYQEKKALPGNATCVTIAEVPEGRRRTSFLAVGCDNQTVSIISLEPDSTLDTLSLQA 652

Query: 630  VSSPPESLLFLEV-QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRF 688
            +++PP S+   E+   S+       + A++FLN GL NGVL RTVVD V G LSD+R RF
Sbjct: 653  LTAPPTSICLAEIFDTSID-----KNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRF 707

Query: 689  LGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEG 748
            LG +PPKL    V G+ +++  SSR WL Y ++      PL Y+TLEYA S S+  C +G
Sbjct: 708  LGAKPPKLVRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDG 767

Query: 749  VVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT--AEE 806
            ++ ++GN LR+F I +LGE   + +  L YTPR+F+  P   +  +IE D    +  A E
Sbjct: 768  LIGISGNTLRIFNIPKLGEKLKQDSTALTYTPRKFISHPFNSVFYMIEADHRTYSKSAIE 827

Query: 807  REAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLD 866
            R   +KE                  E    +     L   ++G P+A +  W SC+RVLD
Sbjct: 828  RIVKQKES-----------------EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLD 870

Query: 867  PRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYR 926
            P +  T   L+L ++EAAFSI    F        L VGT       PK     GY+ +Y 
Sbjct: 871  PLANETIMTLDLDEDEAAFSIAIAYFERGGGEPFLVVGTGVKTTLQPK-GCKEGYLRVYA 929

Query: 927  FVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNT 986
              E+G+ LE LHKT+ + IPL L  FQG LLAGIG  LRLY++GKK LLRKCEN  FP  
Sbjct: 930  IKEQGRILEFLHKTKTDDIPLCLAGFQGFLLAGIGKSLRLYEMGKKALLRKCENNGFPTA 989

Query: 987  IVSINTYRDRIYVGDIQESFHFCKYRR-DENQLYIFADDSVPRWLTAAHHIDFDTMAGAD 1045
            +V+IN    RI VGD+QES  +C YR     QL IFADDS PRW+T    +D++T+A  D
Sbjct: 990  VVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGD 1049

Query: 1046 KFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKAS 1105
            KFGNI+  RL   +S+++++DPTG  I  E+  L GA +K E I  +++G VVTS+ K  
Sbjct: 1050 KFGNIFINRLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIGHYNIGSVVTSITKIP 1109

Query: 1106 LVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF 1165
            LV GG + ++Y T+ G++GA++ F S DD++F S LEMHMR +   L GRDH+AYR  Y 
Sbjct: 1110 LVAGGRDVLVYTTISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISLVGRDHIAYRGYYV 1169

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            P+K V+DGDLCE F  L    Q+ IA +LDR+ G++LKKLE++R 
Sbjct: 1170 PIKGVVDGDLCESFSLLPYPKQQAIALDLDRSVGDVLKKLEQMRT 1214


>gi|388582014|gb|EIM22320.1| hypothetical protein WALSEDRAFT_60013 [Wallemia sebi CBS 633.66]
          Length = 1208

 Score = 1121 bits (2899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/1231 (45%), Positives = 814/1231 (66%), Gaps = 50/1231 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            ++LY+LTL+ P  I  +I G FSGTK+ EI V +  +LE+ R    + ++E + S+ +F 
Sbjct: 3    LHLYNLTLEDPQNINESIVGQFSGTKSQEIAVNKSNILEIYRLNLETIKLELIASSRLFS 62

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+  F+LTGS+KD+IVV SDSG++ +LE    K V   +H ET+GK+G RRI+PGQ+
Sbjct: 63   IIRSIKAFKLTGSKKDFIVVSSDSGKLTVLELVGDKLVV--LHSETYGKTGVRRIIPGQF 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            L  DPKGR++MI + +K KLVY+LNRD  A LTISSPLEA+++++I + I  +D G++NP
Sbjct: 121  LTCDPKGRSLMIASLDKSKLVYILNRDNQANLTISSPLEANRNNSITHHITAVDTGYENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FAA+E DY E DQD TG+A   + K +TFYELDLGLNHV +KWSEP D  ANML+ VPG
Sbjct: 181  QFAALETDYEEIDQDPTGEALINSNKLITFYELDLGLNHVVKKWSEPTDPKANMLIQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAER----GVLIVSAAT 288
            G        DGPSGVL+C  +++I+        R  IP+R+  P E     G +I+SA  
Sbjct: 241  GQSASTDTFDGPSGVLICTVDYLIWYRPESESHRVPIPKRSH-PLENNTSDGTIIISAVL 299

Query: 289  HRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
            H+ K  FFFLLQ+E GD+FK+T+E + E V  L+IKYFDTIP + S+ +LKSGYLFA+SE
Sbjct: 300  HKMKGAFFFLLQSEQGDLFKLTMELNGEDVISLRIKYFDTIPPSNSINILKSGYLFASSE 359

Query: 349  FGNHALYQFQAIGADPD-VEASSSTL-------METEEGFQPVFFQPRGLKNLVRIEQVE 400
            F NH LYQFQ +G D + +E SSS+        +E     +  +F PRGL NLV +++++
Sbjct: 360  FSNHNLYQFQKLGDDDNELEYSSSSYENNGMPSLENPLPIESAYFTPRGLDNLVPVDEIQ 419

Query: 401  SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
            SL PI+D ++ +++  + PQI+T  G G RSSLR++R GL V E   S+LP  P+ +WT+
Sbjct: 420  SLAPILDAKVQSIYAGDTPQIYTASGVGSRSSLRVMRHGLDVIEAVSSELPAPPNGIWTL 479

Query: 461  KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPS 520
            K+N  D +D+ IV+SF N TLVL IGE++EEVSD+G   +  +L+V  +G+DS++QV P 
Sbjct: 480  KQNAQDMYDSLIVLSFVNGTLVLGIGESIEEVSDTGLATSVSTLSVDQLGEDSMIQVFPQ 539

Query: 521  GIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHE 579
            GIRHI  D R+NEW++P    I    +N  QV +ALS GEL+YFE+D  GQL E  E+  
Sbjct: 540  GIRHILNDKRVNEWKSPSDTYITASTTNSRQVCVALSNGELVYFEMDNEGQLNEFQERKS 599

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLF 639
            M   V  + I  VP+GR+R  +LA+G  D TIRI+SLDP++ ++++SVQ+V++ P S+  
Sbjct: 600  MESTVTTMSIGEVPQGRQRCPYLALGCDDQTIRIVSLDPENTLEVVSVQAVTAQPSSICV 659

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
             E+      +    +  +LF+N GL NGVL RTV+D V G L+D+R+RFLG +P  L  V
Sbjct: 660  AEIL----DKSLDKYNPTLFVNIGLANGVLLRTVLDTVNGSLADTRTRFLGAKPVVLRRV 715

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
             V  + A++ LS+R +L Y H  +   TPL YE L+  +SF+++ C +G++ ++   LR+
Sbjct: 716  TVDKQQAVMALSTRTFLNYAHGDQMYFTPLLYEPLDQVSSFNAELCPDGLIGISDTVLRI 775

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAG 819
            FT+  +G+   + ++ L YTPR+ +L P   L + IE+D   + + ER+A   E   + G
Sbjct: 776  FTLPNVGQRMKQDSVALSYTPRKILLHPTAPLFLTIESDHRTI-SRERQA---ELLTSKG 831

Query: 820  MGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
                            +E+ +D +   Q+G  + E+  W SC+R++DP +  T   +EL 
Sbjct: 832  YNP-------------EEHNFDAV---QFGNVRMEAGNWASCVRMIDPVTLTTVNKVELD 875

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAAFS   V +   E  T L VGTAK     P+ +  A Y+ +Y+  ++ + LELLHK
Sbjct: 876  NNEAAFSAAFVQWAGHEDETHLVVGTAKDRMMMPQSHKEA-YLRVYKVTQDSQ-LELLHK 933

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T ++ +P A+  F+GRLLAG+G  LRLYDLGKKRLLRKCENK F   IV++N    RIYV
Sbjct: 934  TDIDDVPYAIHAFKGRLLAGVGKALRLYDLGKKRLLRKCENKSFAAGIVNLNVVGSRIYV 993

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+QES  F  Y+  EN+L +FADD + RW T A  +D+DT+AG DKFGNI+  R+ +  
Sbjct: 994  GDMQESVSFAVYKAPENRLLVFADDIMSRWTTTATPVDYDTVAGGDKFGNIFITRVDKST 1053

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            S+ ++ED +GG +   +G  +GAPN+ + +  F+VGD+VTS+ K+ L  GG + ++Y  +
Sbjct: 1054 SEWVDEDESGGGLLHARGLYHGAPNRSKLLAHFYVGDIVTSITKSQLSAGGRDVLVYTCL 1113

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G++G ++ F+S+DD++F S LE+HMRQE P L GRDH+ +RS Y P K  +DGDLCE +
Sbjct: 1114 HGTVGMIIPFASKDDIEFMSTLELHMRQESPSLVGRDHLGFRSYYIPCKAFVDGDLCELY 1173

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
             +L +  Q+ IA+ELDRT GE+LKK+E +R+
Sbjct: 1174 ASLPVTKQQAIANELDRTSGEVLKKIESLRS 1204


>gi|156051126|ref|XP_001591524.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980]
 gi|154704748|gb|EDO04487.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1147

 Score = 1120 bits (2897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1148 (50%), Positives = 782/1148 (68%), Gaps = 48/1148 (4%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFGA 60
            +LYSLT+  PT I  AI G F+GTK  +IV A G  L L RP+ S G+I T +S ++FG 
Sbjct: 8    FLYSLTINPPTAITQAILGQFAGTKEQQIVTASGSRLTLHRPDPSQGKIITALSHDVFGI 67

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IR++A FRL GS KDYI++ SDSGRI I+E+ P++N F+++H ETFGKSG RR+VPGQYL
Sbjct: 68   IRAIAAFRLAGSNKDYIIITSDSGRITIVEFIPAQNKFNRLHLETFGKSGVRRVVPGQYL 127

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            AVDPKGRA +  + EK KLVYVLNR++ A LTISSPLEAHK+ T+V+++  +D G+ NP+
Sbjct: 128  AVDPKGRACLTASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALVALDVGYANPV 187

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAA+E+DY E+DQD TGQA  + +K L +YELDLGLNHV RKWS+PVD  AN+L  VPGG
Sbjct: 188  FAALEVDYGESDQDPTGQAYEDIEKQLVYYELDLGLNHVVRKWSDPVDRTANILFQVPGG 247

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TLF 295
             DGPSGVLVC E+ + Y++      R  IPRR  A    +R   IV+   H+ K     F
Sbjct: 248  TDGPSGVLVCGEDNITYRHSNQEAFRVAIPRRRGATEDPQRKRNIVAGVMHKLKGAAGAF 307

Query: 296  FFLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
            FFLLQT+ GD+FK+T+   E DN      V  LKIKYFDT+PV AS+C+LKSG+LF ASE
Sbjct: 308  FFLLQTDDGDLFKITIEMVEDDNGQPTGEVKRLKIKYFDTVPVAASLCILKSGFLFVASE 367

Query: 349  FGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPIM 406
            FGNH  YQF+ +G  D ++E  S      T E + PV+F PR  +NL  +E ++S+ P+M
Sbjct: 368  FGNHQFYQFEKLGDDDEEIEFVSDDFPTGTNESYTPVYFHPRPAENLSLVESIDSMNPLM 427

Query: 407  DMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
            D ++ANL +E+APQI+++CG G RS+ R L+ GL VSE+  S+LPGVPSAVWT K   ND
Sbjct: 428  DCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPGVPSAVWTTKLTRND 487

Query: 467  EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
             +DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHIR
Sbjct: 488  VYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIR 547

Query: 527  EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVA 585
             D R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V 
Sbjct: 548  ADRRVNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGTVT 607

Query: 586  CLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQAS 645
            CL +  VPEGR+RS+FLAVG  D+T+RILSLDPD  ++  SVQ+++SPP +L  + +  S
Sbjct: 608  CLSLGEVPEGRQRSQFLAVGCDDSTVRILSLDPDSTLENKSVQALTSPPNALSIMAMSDS 667

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
              G       ++L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ 
Sbjct: 668  SSGG------STLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVSVQGQT 721

Query: 706  AMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            A+L LSSRPWLGY   + +G F+LTPL Y  LE+  +FSS+QC EG+V + G  LR+F+I
Sbjct: 722  AVLALSSRPWLGYSDPVTKG-FMLTPLDYPALEWGWNFSSEQCTEGMVGIQGQNLRIFSI 780

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E+L     + ++PL YTPRRFV  P+  L  ++E D   L+     A K++  E   +  
Sbjct: 781  EKLTNNLLQESIPLTYTPRRFVRHPEHPLFYVVEADNNILSP----ATKQKLLEDPSV-V 835

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDN 881
            NG+  +              L  E++GYP+  ++ W SCI V+DP +       + L+DN
Sbjct: 836  NGDATV--------------LPAEEFGYPRG-TNHWASCISVVDPVTEKKVLATIHLEDN 880

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            E+A S+  V F  +E  T L VGT K L   P R+  AG+IH+YRF E+GK LE +HKT+
Sbjct: 881  ESAVSVAVVAFASQEDETFLVVGTGKDLVVSP-RSSSAGFIHVYRFHEDGKELEFIHKTK 939

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            VE  P+AL  FQGRLLAG+G  LR+YDLG ++LLRK ++++ PN IV + T   RI V D
Sbjct: 940  VEEPPMALLAFQGRLLAGVGKDLRIYDLGMRQLLRKAQSEIAPNMIVGLQTQGSRIIVSD 999

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QES     Y+  EN+L  F DD++ RW +    +D++T+AG DKFGN++ +R P   S+
Sbjct: 1000 VQESITMVVYKFQENRLIPFVDDTIARWTSCTTMVDYETVAGGDKFGNLWLLRCPPKASE 1059

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            E +E+ +G  +  E+  L GAP+++  +   +  D+  S+QK +LV GG + +++  + G
Sbjct: 1060 EADEEGSGAHLLHERQYLAGAPHRLTLMAHNYAQDIPMSIQKTNLVAGGRDCLLWAGLQG 1119

Query: 1122 SLGAMLAF 1129
            +LG ++ F
Sbjct: 1120 TLGILIPF 1127


>gi|393236715|gb|EJD44262.1| hypothetical protein AURDEDRAFT_137476 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1244

 Score = 1119 bits (2894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 564/1195 (47%), Positives = 789/1195 (66%), Gaps = 77/1195 (6%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M+LY+LTLQ P+ +  AI GNFSG +  EI+V+RG       P+  SG++ ++++ ++FG
Sbjct: 1    MHLYNLTLQAPSAVPQAIVGNFSGARHQEIIVSRG-------PDPTSGKLTSVLTHDVFG 53

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            A+RSL  FRLTG  KDY +VGSDSGRI IL+Y+P  N F +++ ET+GKSG RRIV GQY
Sbjct: 54   AVRSLVAFRLTGGTKDYAIVGSDSGRIFILDYDPKANEFKRLYTETYGKSGARRIVAGQY 113

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             AVDPKGRAVMI A EK KLVY+LNRD A  LTISSPLE H++ +I++ I G+D GF+NP
Sbjct: 114  FAVDPKGRAVMIAAMEKSKLVYILNRDAATNLTISSPLEVHRNQSILFHITGVDVGFENP 173

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY ++DQD TG+A   A+K LTFYELDLGLNHV RKWSEP D  AN LV VPG
Sbjct: 174  LFAALEIDYGKSDQDPTGEAFHNAEKMLTFYELDLGLNHVVRKWSEPTDPRANFLVQVPG 233

Query: 240  GG--------DGPSGVLVCAENFVIYKNQGHPDVRAVIP-RRADLPA-ERGVLIVSAATH 289
            G         DGPSGVLVC EN +IY++  HP  R  +P RRA L + ERG++IV+A  H
Sbjct: 234  GTSASSPDKFDGPSGVLVCCENHIIYRHMDHPQHRVPVPRRRAPLDSEERGLIIVAAVMH 293

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            +                 KVT++H ++ V+ LKIKYFDT+PV++S+C+LKSG+LF AS+F
Sbjct: 294  K----------------MKVTIDHQDDEVTSLKIKYFDTVPVSSSLCILKSGFLFVASDF 337

Query: 350  GNHALYQFQAIG-ADPDVEASSST-----LMETEEGFQPVFFQPRGLKNLVRIEQVESLM 403
            G H LYQFQ +G  D + E SSS+     + + +E     +FQPR L+NL+  + ++S+ 
Sbjct: 338  GPHHLYQFQKLGDDDAETEFSSSSYPKNGMADPDEALPSAYFQPRPLENLLLCDSLDSIN 397

Query: 404  PIMDMRIANLFE--EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLP-GVPSAVWTV 460
            PI+D ++ NL     + PQ +  CGRG RSS R+LR GL V E   S LP G+P+AVWT 
Sbjct: 398  PIIDAKVLNLMPTISDTPQFYVACGRGARSSFRLLRHGLEVEENISSDLPSGIPNAVWTT 457

Query: 461  KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPS 520
            K   +D FD YIV+SF N TLVL+IGET+EE  ++GFL   P+L V  IGDD+L+QV+P 
Sbjct: 458  KIRADDPFDTYIVLSFVNGTLVLTIGETIEECQETGFLSAEPTLGVQQIGDDALLQVYPH 517

Query: 521  GIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
            GIRHI  D R+NEW+ P  +TIV+  +N  QVV+AL+  EL+YFE+D+ GQL E +  + 
Sbjct: 518  GIRHILADKRVNEWKVPSGKTIVQAATNSRQVVVALNSAELVYFELDLDGQLNEYQDRKA 577

Query: 581  SGDVA-CLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLF 639
             G V   L +A VPEGR+R+ +LAVG  D T+RI+SLDPD+ ++ +S+Q++++PP ++  
Sbjct: 578  MGSVVLALSMAEVPEGRQRTPYLAVGCEDQTVRIISLDPDNTLETISLQALTAPPSAICI 637

Query: 640  LE-VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
            +  + A+V          +LF+N GL +G+  RTV+D VTG+L+D+R+RFLG RP +L  
Sbjct: 638  VAIIDAAVNKIS-----ETLFVNIGLTSGLFLRTVLDPVTGELTDTRTRFLGTRPIRLNR 692

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
            V + G+ A+L LSSR WL Y H+    LTPL ++ L+Y + F++D C +G + + G+ ++
Sbjct: 693  VTIAGKPALLALSSRMWLNYAHQEALHLTPLIFDPLDYVSGFTADLCPDGFIGLKGSTIK 752

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAA 818
            +F I ++G+      +PL YTPR+  + P   L  I E+D    + E    A ++     
Sbjct: 753  IFQITKIGQRLKHEVMPLSYTPRKIAVHPMNGLFYIAESDHRTHSQEAVHGALQQ----- 807

Query: 819  GMGENGNGNMDQMENGDDENKYD----PLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                             D  KYD     L  E +G+P+A +  W SC+R+++P    T  
Sbjct: 808  ----------------PDLKKYDRDVLELLPEVFGHPRAPACVWASCVRIVNPVELTTIY 851

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
             L+L +NEAAF I  V F  +++   L VGTAK   F   R+  +GY+  YR +++G+ L
Sbjct: 852  RLDLDNNEAAFLIALVPFSARDNELTLVVGTAKD-AFLAPRSCTSGYLRTYRVLDDGRGL 910

Query: 935  ELLHKTQVEGIPLALCQFQGRLL-AGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTY 993
            ELLHKT+ + IPL+L  FQG LL AGIG  LR+YD+GKK+LLRK E+KLF   I S++T 
Sbjct: 911  ELLHKTECDDIPLSLLAFQGNLLVAGIGKCLRIYDMGKKKLLRKAESKLFTTAITSLSTQ 970

Query: 994  RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
              RI  GD Q+S  FC Y+  EN+L +FADDS  RW T+   +D++T+   DKFGN++  
Sbjct: 971  GARIIAGDAQQSIFFCVYKATENRLLVFADDSQQRWTTSQVMLDYNTVVAGDKFGNVFVN 1030

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES 1113
            RL   VS+ +++DPTG  +  E+G   GAP+K   +  FHVGD++ SLQ+ SLVPGG E 
Sbjct: 1031 RLSDHVSNLVDDDPTGTGLLHEKGMFMGAPHKTSMLCHFHVGDIIMSLQRTSLVPGGREV 1090

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK 1168
            ++Y  + G++G ++ F+S++DVDFF+ LE HMR E+  L  RD +A+R  Y PVK
Sbjct: 1091 IVYFGLHGTIGMLVPFASKEDVDFFTPLEQHMRSENLSLVSRDILAWRGYYVPVK 1145


>gi|164656549|ref|XP_001729402.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
 gi|159103293|gb|EDP42188.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
          Length = 1207

 Score = 1102 bits (2849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/1235 (45%), Positives = 794/1235 (64%), Gaps = 60/1235 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            M LY+LTLQ  + +  A+ G F+GT+  ++++ RG  LE+   + NSG++   ++   F 
Sbjct: 1    MQLYNLTLQPSSNVTTAVVGQFAGTREQQVLLVRGSRLEMYHIDTNSGQMTRSLAQHTFS 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS A FRL G  KDY+++GSD+GRIV+LEYN S N F+K+H+ETFG+SG RRIVPGQY
Sbjct: 61   NIRSAASFRLMGGSKDYLILGSDAGRIVVLEYNGSLNQFEKVHEETFGRSGNRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRAV+IGA EK KL+Y+LNRDT A LTISSPLEAH+   IV  I G+D G++NP
Sbjct: 121  LATDPKGRAVLIGAVEKSKLIYILNRDTDAHLTISSPLEAHRHSAIVQCIVGVDVGYENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA++E DY++AD D TG+A +  ++ LT+YELDLGLNHV R+W+EPV + A+ L+ VPG
Sbjct: 181  LFASLETDYADADADPTGEAYARTEQMLTYYELDLGLNHVVRRWTEPVASSAHHLIPVPG 240

Query: 240  G-------GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD--LPAERGVLIVSAATHR 290
            G        DGPSGVLVC +++++YK+ G P+ R  IP R        RG +IV++  H+
Sbjct: 241  GYNHATERWDGPSGVLVCMDDYIVYKHPGQPEHRVPIPVREQHGFGQSRGSMIVASVLHK 300

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
             KT FF L+Q E GD+FKV+++H++E V  L+I+YFDT+PV A++C+L+SG+L  ASE G
Sbjct: 301  MKTSFFLLVQNEDGDLFKVSVDHEDEQVEALRIRYFDTVPVAATLCILRSGFLLVASETG 360

Query: 351  NHALYQFQAIGADPD---VEASSSTLMETEEGFQPV----FFQPRGLKNLVRIEQVESLM 403
               LY FQ +G D D    E  S+    ++ G  P+     F PR L NL    ++++L 
Sbjct: 361  AQQLYAFQKLGDDDDERFPEYISTDYGSSDAGPSPLPSLPTFCPRPLDNLALAYELDALD 420

Query: 404  PIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            P++D +++N    + PQI+  CGRG RSS + LR GL VSE+  S LPGVP AVW+ K  
Sbjct: 421  PLLDAKVSNPLHSDVPQIYAACGRGARSSFKRLRHGLEVSEVVSSDLPGVPEAVWSTKLR 480

Query: 464  VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             +D++D YIV+SF N TLVLSIGET+EEV DSGFL T  +LAV  +G D+L+QVHP GIR
Sbjct: 481  SSDQYDGYIVLSFVNGTLVLSIGETIEEVEDSGFLTTERTLAVQQLGTDALLQVHPRGIR 540

Query: 524  HIREDGRINEWRTP----GKRT-IVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EK 577
            HI  + ++NEW TP    G  T IV   +N  QVV+AL   E++YFE+DM GQL E  E+
Sbjct: 541  HILSNKQVNEWTTPSCQDGSPTQIVAATTNERQVVLALDSQEIVYFELDMDGQLNEFQER 600

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
             ++  D+  L I++ PEG +R+ ++A+   D T+RI+SLDPD  +  +S+Q++++PP S+
Sbjct: 601  RDIEADIVALSISACPEGSQRTPYVAIACADQTVRIVSLDPDSTLAPMSLQALTAPPSSI 660

Query: 638  LFLE-VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
               E + AS+       H  ++F+  GL NGV  RTV+D  TGQL+D+R+RFLG RP +L
Sbjct: 661  SVCEMLDASLD-----RHHLTMFVCIGLANGVYIRTVLDPSTGQLTDTRTRFLGGRPVRL 715

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                V G  AM+ LS+R WL Y        TPL  E L + ++F ++ C +G++ + GNA
Sbjct: 716  VRTQVHGDTAMMALSTRSWLAYTLHSHLHFTPLMLEALTHVSTFHTELCPDGLLGIEGNA 775

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKK-KLMVIIETDQGALTAEEREAAKKECF 815
            LR+ T+ RLG      +L L YTPR+  + P++  L  +IE+D        R     +  
Sbjct: 776  LRILTVPRLGSELKMDSLRLTYTPRKLAVHPQQASLFYVIESDH-------RVVPPTDVV 828

Query: 816  EAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL 875
              A                     +DP+   Q+G+ +A +  W SC+RV+D  +  T   
Sbjct: 829  SQA------------------RTAWDPV---QFGHVRASAGHWASCLRVVDGTTMQTCAE 867

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
              L+ +EAA S+  V F    +   L VG+A G+   P     A ++  YR  + G  L 
Sbjct: 868  YALEKDEAALSMALVPFAACGNELFLVVGSALGVTHAPL-TWRAAFLSTYRLTDNGCGLA 926

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
            L+HKT+V+ +PLAL  F GRLLAG GP +R++D+G K+LLRKC+++ FP+ +VS+     
Sbjct: 927  LVHKTEVDHVPLALRAFHGRLLAGTGPYVRIFDMGTKKLLRKCQSRPFPSKVVSLQVQGY 986

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAA-HHIDFDTMAGADKFGNIYFVR 1054
            R+ VGD+QES H+  Y+   N L  FADD +PRW T+A   +D+DT+   DKFGN++ +R
Sbjct: 987  RVIVGDMQESVHYSVYKPATNTLVAFADDIMPRWTTSALLMLDYDTVMAGDKFGNVFVLR 1046

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESV 1114
            +    S   +EDPTG  ++ E+  L GA ++ + +  +HVGD++TSL   SLVPGG   V
Sbjct: 1047 IDSSASLSADEDPTGLMLQNERSYLMGAAHRAQLLAHYHVGDIITSLSMESLVPGGRPVV 1106

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGD 1174
            +Y  V G++GA++ F SR+DV  F+ LEMHMRQE+  L GRDH+AYR  Y PVK V+D D
Sbjct: 1107 LYTCVNGTIGALVPFISREDVRLFTTLEMHMRQENLSLTGRDHLAYRGHYTPVKAVVDAD 1166

Query: 1175 LCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            LCE +  L  + Q  IADELDRTP +I KKL  +R
Sbjct: 1167 LCELYTALPHEKQESIADELDRTPADIAKKLAYMR 1201


>gi|401407861|ref|XP_003883379.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
 gi|325117796|emb|CBZ53347.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
          Length = 1233

 Score = 1099 bits (2842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/1245 (45%), Positives = 805/1245 (64%), Gaps = 49/1245 (3%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTLQ+PT I+ A+ GNFS  +  E+VV+RG+VLELLRP++ G+++ + STE+FG IR
Sbjct: 4    LYHLTLQKPTAIVHALQGNFSAPRAQEVVVSRGRVLELLRPDDQGKLQAIASTEVFGIIR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            S+A FRLTG+ +DY+ +GSDSGR+VI++++  KN F+++H ET+GK+G RR+VPG+YLAV
Sbjct: 64   SIAAFRLTGANRDYLAIGSDSGRLVIVQFSAEKNEFERVHCETYGKTGIRRVVPGEYLAV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGR +M+ A E+QK VY++NRD  A+LTISSPLEAHKSH I + +CGID GFDNP+FA
Sbjct: 124  DPKGRTLMVAAVERQKFVYIVNRDNKAQLTISSPLEAHKSHAICHDLCGIDMGFDNPLFA 183

Query: 183  AIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGD 242
            ++E +    D+       +   K +  +E+DLGLNHV +K + PV   A+ L+ VPGGG 
Sbjct: 184  SLEQNVESTDRKPATPGVT-VPKGVCLWEMDLGLNHVIKKATLPVPPSAHCLIPVPGGGG 242

Query: 243  GPSG--VLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
                  VLVC  NF++YK   H +V   IPRR +  ++RG+++V+ A HR K  FF L+Q
Sbjct: 243  ADGPSGVLVCCGNFLLYKKPDHEEVSCAIPRRLETGSDRGLVVVAFAVHRMKDFFFILIQ 302

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            TEYGDI+K+ + HD   V E+  +YFDT+PV  ++CVLKSGYLF ASEFGNH  YQF  I
Sbjct: 303  TEYGDIYKIEISHDEGVVREIVCRYFDTVPVANALCVLKSGYLFVASEFGNHLFYQFTGI 362

Query: 361  GADP-DVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            G+D  D   SSS  +  E     + F+PR LKNL  +++++SL PI D+++ +     AP
Sbjct: 363  GSDASDPRCSSSHPLGRE---AIIAFKPRPLKNLALVDELQSLSPITDLKVLDAQGTGAP 419

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            Q++ LCG+GPRS+LRIL+ GL V EMA ++LPG   AVWT K +    FD YI+V+F  +
Sbjct: 420  QVYVLCGKGPRSALRILQHGLGVEEMADNELPGRARAVWTTKLSHQSAFDGYIIVAFEGS 479

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
            +LVL IG+TVEEV+DS FL    SL V+L+ DDS +QVH +GIRHI +  R+NEWRTPG 
Sbjct: 480  SLVLQIGDTVEEVTDSLFLTNVSSLLVALMYDDSFIQVHETGIRHILKSKRVNEWRTPGG 539

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            R I    +N  Q+VI+L+GGELI FEVD +  L+E  +  ++ +  C+ + ++P+GR R+
Sbjct: 540  RRIKAADANERQLVISLAGGELILFEVDESHTLVETARRNINVETTCMSMQAIPKGRLRA 599

Query: 600  RFLAVGSYDNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQASVGGEDGADHPAS 657
             FLAVG  DN +RILSL+ D  ++ L+ Q +  ++ PES+    +     G  G D   S
Sbjct: 600  SFLAVGGLDNMVRILSLEKDRNLRQLATQLLPNNATPESVCLATLTGL--GAHGKDAGKS 657

Query: 658  -----LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSS 712
                 L+L+ GL  GV+ R+VVD V G L D RSRFLG R  +  +V + G+ A+L LS 
Sbjct: 658  EDNGVLYLHVGLNTGVMIRSVVDPVLGTLLDQRSRFLGGRAVRFHAVTLQGQPAILALSE 717

Query: 713  RPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNET 772
            + WL Y  + +   TPL+Y+ LE  ASF S+QC +G V++AG +LR+F  +RLGETF++T
Sbjct: 718  KSWLCYTFQHKLHCTPLNYDPLECVASFCSEQCTDGFVAIAGGSLRIFRCQRLGETFSQT 777

Query: 773  ALPLRYTPRRFVLQP--------------------KKKLMVIIETDQGALTAEEREAAKK 812
             LPL +TPR     P                    +   + I+E D  A      E+ K 
Sbjct: 778  LLPLSFTPRAMAALPHISATESQGAVDAAGVGPSRRAAALAIVEADHNAYD----ESTKA 833

Query: 813  ECFEAA-GMGENGNGNMDQMENGD---DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR 868
            E   A  G+  N     ++ E  D   +E +   L ++QYG  KA   KW SCIR+++P 
Sbjct: 834  EIRRALRGIKVNQEEEEEKEETDDMQLEEKEQHDLPEDQYGTFKAGPGKWGSCIRIVNPL 893

Query: 869  SANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV 928
             A T   + L+ +EAA S C   + + E   LL VGT   +   P R +    I ++ + 
Sbjct: 894  MAMTIDKVSLETDEAALSCC---YCEMEGLPLLVVGTVTAMTLKP-RKVPQASIKVFSY- 948

Query: 929  EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIV 988
            ++  SL L+H T VE  P+AL  F+G LLAG+G  LRLY LGKKRLL+KCE K  P  + 
Sbjct: 949  DDKFSLNLVHSTPVEDYPMALAPFRGMLLAGVGHKLRLYALGKKRLLKKCEYKNLPCGVA 1008

Query: 989  SINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
             I    DR++VGD++ES H  +YR  EN  Y+ ADD VPRWLT    +D+ T   ADKF 
Sbjct: 1009 FIRVAGDRLFVGDLRESVHVMRYRLSENLFYVLADDVVPRWLTKGEVLDYHTFVAADKFD 1068

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP 1108
            +++  R+P +   +   D TG +++ +   L     K++ ++ FH+G+VVT+L++A+L  
Sbjct: 1069 SVFICRVPSEAKQDELGDTTGLRLRGDTTYLTDKCFKLQSLLHFHIGEVVTALERATLTA 1128

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK 1168
            G  ES+IYGT+MGS+GA   F ++ ++D F+HLEM +R E PPL GR+H+ +RS Y P K
Sbjct: 1129 GASESIIYGTIMGSIGAFSPFLTKHELDLFTHLEMVLRSEKPPLGGREHIMFRSYYHPAK 1188

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            + +DGDLCE +  L  D+Q++IA + ++TP +ILK LE+IRN+I+
Sbjct: 1189 NTVDGDLCESYALLPYDVQKRIAQDFEKTPADILKHLEDIRNRIL 1233


>gi|237837399|ref|XP_002367997.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
 gi|211965661|gb|EEB00857.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
 gi|221488748|gb|EEE26962.1| splicing factor 3B subunit, putative [Toxoplasma gondii GT1]
 gi|221509241|gb|EEE34810.1| splicing factor 3B subunit, putative [Toxoplasma gondii VEG]
          Length = 1233

 Score = 1083 bits (2802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/1244 (44%), Positives = 795/1244 (63%), Gaps = 47/1244 (3%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTLQ+PT I+ A+ GNFS  +  E+VV+RG+VLELLRP++ G+++ + STE+FG IR
Sbjct: 4    LYHLTLQKPTAIVHALQGNFSAPRAQEVVVSRGRVLELLRPDDQGKLQAISSTEVFGIIR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            S+A FRLTG+ +DY+ +GSDSGR+ I++++  KN F+++H ET+GK+G RR+VPG+YLAV
Sbjct: 64   SIAAFRLTGANRDYLAIGSDSGRLAIVQFSAEKNEFERVHCETYGKTGIRRVVPGEYLAV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGR +M+ A E+QK VY++NRD  A+LTISSPLEAHKSH I + +CG+D GFDNP+FA
Sbjct: 124  DPKGRTLMVAAVERQKFVYIVNRDNKAQLTISSPLEAHKSHAICHDLCGVDMGFDNPLFA 183

Query: 183  AIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGD 242
            ++E +   +D+       +   K L  +E+DLGLNHV +K + PV   A+ L+ VPGGG 
Sbjct: 184  SLEQNVESSDRKPATPGVT-VPKGLCLWEMDLGLNHVIKKATLPVPASAHCLIPVPGGGG 242

Query: 243  GPSG--VLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
                  +LVC  NF++YK   H ++   IPRR +  ++RG+ +V+ A HR K  FF L+Q
Sbjct: 243  ADGPSGLLVCCGNFLLYKKPDHEEICCAIPRRLETGSDRGLAVVAFAVHRMKDFFFILIQ 302

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            TEYGDI+KV + H+   V E+  +YFDT+PV  ++CVLKSGYLF ASEFGNH  YQF  I
Sbjct: 303  TEYGDIYKVEISHEEGVVREVVCRYFDTVPVANALCVLKSGYLFVASEFGNHLFYQFTGI 362

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
            G+D      SST     E    + F+PR L+NL  +++++SL PI D+++ +     APQ
Sbjct: 363  GSDASDPRCSSTHPLGREAI--IAFKPRPLRNLALVDELQSLSPITDLKVLDAQGTGAPQ 420

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            ++ LCG+GPRS+LRIL+ GL V EMA ++LPG   AVWT K +  + FD YI V+F+ ++
Sbjct: 421  VYVLCGKGPRSTLRILQHGLGVEEMADNELPGRARAVWTTKLSHQNAFDGYIFVAFDGSS 480

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVL IG+TVEEV+DS FL    SL V+L+ DDS +QVH +GIRHI +  R+NEWR PG R
Sbjct: 481  LVLQIGDTVEEVTDSAFLTNVSSLLVALMYDDSFIQVHETGIRHILKSKRVNEWRAPGGR 540

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
             I    +N  Q+VI+L+GGEL+ FEVD    L+E  +  ++ +  C+ + ++P+GR R+ 
Sbjct: 541  RIKAAAANERQLVISLAGGELVLFEVDDAHTLVETARRNINVESTCMSMQAIPKGRLRAS 600

Query: 601  FLAVGSYDNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQASVGGEDGADHPAS- 657
            FLAVG  DN +RILSL+ D  ++ LS Q +   + PES+    +     G +  D   S 
Sbjct: 601  FLAVGGLDNMVRILSLEKDRNLRQLSTQLLPNDATPESVCLATLTGL--GANSTDAGKSQ 658

Query: 658  ----LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
                L+L+ GL  GV+ R+VVD V G L D RSRFLG R  +  +V + G+ A+L LS +
Sbjct: 659  DNGVLYLHVGLNTGVMIRSVVDPVLGTLLDQRSRFLGGRAVRFHAVTLQGQPAILALSEK 718

Query: 714  PWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETA 773
             WL Y  + +    PL+Y+ LE  ASF S+QC +G V++AG +LR+F  +RLGETF +T 
Sbjct: 719  SWLCYTFQHKLHCIPLNYDPLECVASFCSEQCTDGFVAIAGGSLRIFRCQRLGETFGQTV 778

Query: 774  LPLRYTPRRFVLQP--------------------KKKLMVIIETDQGAL----TAEEREA 809
            LPL +TPR     P                    +   + I+E D  A      AE R A
Sbjct: 779  LPLSFTPRAMAALPHPSAAESQAGGDAAGADPSRRASALAIVEADHNAYDESTKAEIRRA 838

Query: 810  AKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS 869
             K          +    +  Q+E  + ++    L ++ YG  KA   KW SCIR+++P  
Sbjct: 839  LKGIKVNQEEEEDKEETDDMQLEEKEQQD----LPEDHYGTFKAGPGKWGSCIRIVNPLM 894

Query: 870  ANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVE 929
            A T   + L+ +EAA S C   F + E   LL VGT   +   PK+ +    I ++ + +
Sbjct: 895  AMTIDKVSLETDEAALSCC---FCEMEGLPLLVVGTVTAMTLKPKK-VPHASIKVFSY-D 949

Query: 930  EGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVS 989
            +  SL L+H T VE  P+AL  F+G LLAG+G  LRLY LG+KRLL+KCE K  P  +  
Sbjct: 950  DKFSLSLVHSTPVEDYPMALTAFRGMLLAGVGHKLRLYALGRKRLLKKCEYKNLPCGVAF 1009

Query: 990  INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGN 1049
            I    DR++VGD++ES H  +YR  EN  Y+ ADD VPRWLT    +D+ T   ADKF +
Sbjct: 1010 IRVAGDRLFVGDVRESVHVMRYRLSENLFYVLADDVVPRWLTKGEVLDYHTFVAADKFDS 1069

Query: 1050 IYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPG 1109
            ++  R+P +  ++   D TG +++ +   L     K++ ++ FH+G++VT+L++A+L   
Sbjct: 1070 VFICRVPSEAKEDELGDTTGLRLRGDTTYLTDKCFKLQSLLHFHIGEIVTALERATLTSA 1129

Query: 1110 GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKD 1169
              ES++YGT+MGS+G+   F ++ ++D F+HLEM MR E PPL GR+H+ +RS Y P K+
Sbjct: 1130 ASESIVYGTIMGSIGSFSPFLTKHELDLFTHLEMVMRSEKPPLAGREHIMFRSYYHPAKN 1189

Query: 1170 VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
             +DGDLCE +  L  + Q++IA + ++TP +ILK LE+IRN+I+
Sbjct: 1190 TVDGDLCESYALLPYEDQKRIAQDFEKTPADILKHLEDIRNRIL 1233


>gi|124359136|gb|ABD32504.2| CPSF A subunit, C-terminal; WD40-like [Medicago truncatula]
          Length = 632

 Score = 1083 bits (2800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/695 (77%), Positives = 589/695 (84%), Gaps = 65/695 (9%)

Query: 515  MQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE 574
            MQVHP+GIRHIREDG INEWRTPGKRTI KVGSNRLQVVIAL+GGELIYFEVD+TGQL+E
Sbjct: 1    MQVHPNGIRHIREDGHINEWRTPGKRTIAKVGSNRLQVVIALNGGELIYFEVDVTGQLME 60

Query: 575  VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPP 634
            VEKHEMSGDVACLDIA VPEGR+RSRFLAVGSYD TIRILSLDPDDCMQ L +QS+SS  
Sbjct: 61   VEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDKTIRILSLDPDDCMQTLGIQSLSSAS 120

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
            ESLLFLEVQAS                    NGVL RTVVDMVTG LSDSRS FLGLRPP
Sbjct: 121  ESLLFLEVQAS--------------------NGVLSRTVVDMVTGLLSDSRSPFLGLRPP 160

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
            KLF +VV G+ AMLCLSSRPWLGYIH+G FLLTPLSYETLE+AASFSSDQCVEGVV++AG
Sbjct: 161  KLFPIVVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCVEGVVALAG 220

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
             ALR+FTIERLGETFNET +PLRYTP +FVLQPK+KL+V+IE+DQGA TAEEREAAKK  
Sbjct: 221  EALRIFTIERLGETFNETVIPLRYTPMKFVLQPKRKLLVVIESDQGAFTAEEREAAKK-- 278

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                                 DE+K DPLSDE YGYPKAESDKW SCIR+LDP++ NTTC
Sbjct: 279  ---------------------DEDKDDPLSDEHYGYPKAESDKWASCIRILDPKTGNTTC 317

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
            LLELQDNEAAFS CTVNFHDKE+GTLL VGTAKGLQF P+R++ AG+IHIYRF+E+G+SL
Sbjct: 318  LLELQDNEAAFSGCTVNFHDKEYGTLLDVGTAKGLQFTPRRSLTAGFIHIYRFLEDGRSL 377

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
            ELLHKTQVEG+PLAL QFQGRLLAGIGPVLR YDLGK+RLLRK ENKLFPNTIVSI TYR
Sbjct: 378  ELLHKTQVEGVPLALSQFQGRLLAGIGPVLRFYDLGKRRLLRKYENKLFPNTIVSIQTYR 437

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            DRIYVGD QESFH+CKYR DENQLYIFADD VPRWLTA++HIDFDTMA            
Sbjct: 438  DRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTASYHIDFDTMA------------ 485

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESV 1114
                      EDPTGG+IKWEQGKLNGAPNK+EEIVQFHVGDV++ LQKASL+PGGGE +
Sbjct: 486  ----------EDPTGGRIKWEQGKLNGAPNKVEEIVQFHVGDVISCLQKASLIPGGGECI 535

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGD 1174
            + GTVMGS+GA+ AF+SRDDVDFFSHLEMHMRQ++PPLCGRDHMAYRSAYFPVKDVIDGD
Sbjct: 536  LNGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRSAYFPVKDVIDGD 595

Query: 1175 LCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            LCEQFPTL +DLQRKIADELDRT GEILKKLEE +
Sbjct: 596  LCEQFPTLPMDLQRKIADELDRTRGEILKKLEEYK 630


>gi|37359734|dbj|BAC97845.1| mKIAA0017 protein [Mus musculus]
          Length = 1122

 Score = 1066 bits (2756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/825 (62%), Positives = 655/825 (79%), Gaps = 19/825 (2%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1   MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61  VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121 LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181 MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240 GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
           G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241 GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 300 FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 359

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
           Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 360 QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 417

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
           E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 418 EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 477

Query: 476 FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
           F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 478 FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 537

Query: 536 TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
           TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 538 TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 597

Query: 595 GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
           G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E    +GG +  D 
Sbjct: 598 GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVE----MGGTEKQDE 653

Query: 655 PAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                    L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L
Sbjct: 654 LGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVL 713

Query: 709 CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
            +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  
Sbjct: 714 AMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 773

Query: 769 FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKE 813
           FN+ A PL+YTPR+FV+ P+   ++IIETD  A T   +   K++
Sbjct: 774 FNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQ 818



 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 170/310 (54%), Positives = 231/310 (74%)

Query: 902  AVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIG 961
            A    +  Q    R++  G+++ Y+ V  G+ LE LHKT VE +P A+  FQGR+L G+G
Sbjct: 810  ATKAQRKQQILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 869

Query: 962  PVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIF 1021
             +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QESF + +Y+R+ENQL IF
Sbjct: 870  KLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIF 929

Query: 1022 ADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNG 1081
            ADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W++G LNG
Sbjct: 930  ADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNG 989

Query: 1082 APNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHL 1141
            A  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +D DFF H+
Sbjct: 990  ASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSYEDHDFFQHV 1049

Query: 1142 EMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEI 1201
            EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++ELDRTP E+
Sbjct: 1050 EMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEV 1109

Query: 1202 LKKLEEIRNK 1211
             KKLE+IR +
Sbjct: 1110 SKKLEDIRTR 1119


>gi|300120114|emb|CBK19668.2| unnamed protein product [Blastocystis hominis]
          Length = 1240

 Score = 1062 bits (2747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/1236 (43%), Positives = 790/1236 (63%), Gaps = 56/1236 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LY+LTL + + +   I GNFS  K  E V++RG ++EL RP+++G I  + S E++G 
Sbjct: 1    MHLYNLTLHKASSVQRVIYGNFSSAKVEEFVISRGNIIELWRPDDNGNINVICSFEVYGL 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IR+L  FRL+G+  D++++GSDSGRIV+L+Y+  KN F+KIHQETFGK G  R +PGQYL
Sbjct: 61   IRALKPFRLSGNNTDFVLIGSDSGRIVVLKYDTEKNTFEKIHQETFGKVGVIRGLPGQYL 120

Query: 121  AVDPKGRAVMI----------GACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSIC 170
            AVDP GRA MI          GA EKQ LVYVLNRD+   +TISSPLEAHKS TIV +  
Sbjct: 121  AVDPNGRAFMISGFLFHVSSLGAIEKQNLVYVLNRDSRGNVTISSPLEAHKSQTIVLTTE 180

Query: 171  GIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNG 230
            G+D G+DNP+FA +EL+Y EAD+DSTG+AA + +K LT+Y+LDLGLNHV RKWS+ V+  
Sbjct: 181  GLDVGYDNPMFACLELNYGEADEDSTGEAAQQTEKVLTYYQLDLGLNHVIRKWSKTVERS 240

Query: 231  ANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHR 290
            AN+L  VP G  GP GVLV AEN+V+Y N+ HP++RA IPRR  LP  RG +I++AA  +
Sbjct: 241  ANLLARVP-GDSGPGGVLVFAENWVMYCNENHPEIRAPIPRREFLPENRGTMIITAALFQ 299

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            ++   F+L+Q+EYGD++K+TL  D+ HV +L +KYFDTIP   ++ + K G+L A SE G
Sbjct: 300  REGNLFYLVQSEYGDLYKITLSFDSSHVHDLVVKYFDTIPAATTLHITKKGFLLATSEVG 359

Query: 351  NH-----------ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQV 399
            +              YQF A+G D   +AS    ++ +   Q   F PR L NL  ++ +
Sbjct: 360  DQYALPLALLTGSCFYQFIALGDDDSAQASFLGSLQPDGSVQVPVFSPRALTNLRPVDTL 419

Query: 400  ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
             SL P++ +   +L  +  PQ+F LCGR  RS L++L+ GLA+S ++ + LP  PS +WT
Sbjct: 420  PSLSPLVKIHAEDLRGDGTPQLFALCGRSSRSQLKVLQQGLAISLLSQNPLPYAPSGLWT 479

Query: 460  VKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP 519
            ++     +   ++V+SFNNAT+VL++G++VE+V D+GF     +LA  ++  +S +QV+P
Sbjct: 480  LRDARTGQ-HRFMVISFNNATIVLAVGKSVEQVMDTGFKLDESTLATGVLEGNSFLQVYP 538

Query: 520  SGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHE 579
             G R I EDG    W  P +R+I     N  Q+V+ALS GE++YFE+D   + +E E   
Sbjct: 539  GGFRQIFEDGHTKVWEPPSRRSITAAAMNLRQIVVALSNGEVLYFELDERLEWVERESMN 598

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLF 639
               +V CLD+ ++     R+ FLAVG  D + R+ SL P+  ++ LS+Q++++ P +L  
Sbjct: 599  HREEVICLDLPALAPNSLRAPFLAVGYGDRSCRVYSLAPNSLLEELSMQALNAMPSNLTL 658

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRS-RFLGLRPPKLFS 698
              ++       G+    +L L  G++NG+L R  VD V+G+LS++RS RFLG RP +LF 
Sbjct: 659  DTMRMG----SGSLARETLLLTVGMENGILMRVEVDPVSGKLSNARSTRFLGPRPVRLFK 714

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
            ++ GG   +L LS +PWL Y       LT L  + L+ AA F ++ C EG+V VAG  L 
Sbjct: 715  ILAGGNPCVLALSVKPWLCYCANNTLTLTSLVSDPLDLAAPFCNEDCSEGIVCVAGTNLN 774

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAA 818
            +  I+ L + F  T++PL YTPR  V+ P +  ++++ETD  A +  E+++         
Sbjct: 775  IIRIDDLTQPFTATSIPLSYTPRELVVYPGQPRLLLLETDHNAYSELEKQS--------- 825

Query: 819  GMGENGNGNMDQMENGDDENKYDPLSDEQYGYP-KAESDKWVSCIRVLDPRSANTTCLLE 877
                       Q  N    N+YD       G P  AE DKW SCIRV+D  S  T   LE
Sbjct: 826  ---------FYQQHNVSYVNEYD------CGAPIPAEPDKWASCIRVVDAISLQTLERLE 870

Query: 878  LQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELL 937
            L DNEAAFS+C   F  K     + +GTAK L+  P R+   G+I ++RFV EG SL+LL
Sbjct: 871  LADNEAAFSMCVCRFASKGDEPFVVIGTAKNLKIHP-RSCSQGFISVFRFV-EGHSLQLL 928

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRI 997
            H+T+V+ +P ALC+F G+L AGIG  +R+YDLGKK+LLRKCENK  P+ +  +    +R+
Sbjct: 929  HRTEVDEVPAALCEFDGKLAAGIGRSVRVYDLGKKKLLRKCENKAMPHFVTKLRAMGERL 988

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
            Y GD+ ++  F K+R+  NQL  FAD  +PR +TA   +D++T+   DK GN++  R+  
Sbjct: 989  YAGDLTDNVSFVKFRKGTNQLVEFADGGIPRSITALDVLDYNTVVCGDKGGNLFVERVDP 1048

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYG 1117
             V D+I  +PTG +  W  G L+ APNK E+    ++G++VTS+QK  L+PGG E V+YG
Sbjct: 1049 KVDDDI-ANPTGSRSLWNSGLLSAAPNKAEQAASIYLGEIVTSVQKTVLIPGGDEVVLYG 1107

Query: 1118 TVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCE 1177
            T+ G++GA+L   SRDD+    H+EM++R++ P L GRD +++RSAY P+K +IDG+LCE
Sbjct: 1108 TIFGTIGALLPMPSRDDLHHLMHIEMYIRKQEPSLVGRDILSWRSAYTPMKGIIDGNLCE 1167

Query: 1178 QFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
             F  L    Q +IA+ L  +   I+KK+E++R++++
Sbjct: 1168 TFSMLPQIKQEEIANALVLSVSSIVKKMEDLRSRVM 1203


>gi|443922899|gb|ELU42250.1| splicing factor 3B subunit 3 [Rhizoctonia solani AG-1 IA]
          Length = 1212

 Score = 1060 bits (2740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/1279 (44%), Positives = 775/1279 (60%), Gaps = 143/1279 (11%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LY+LTLQ PT I  AI GNFSG +  EI+++RG +LELLRP++S G++ T+++ ++FG
Sbjct: 1    MHLYNLTLQAPTAITQAIVGNFSGIRQQEIIISRGTILELLRPDSSTGKVSTVLAQDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+A FRLTG  KDY +VGSDSGRI++LEY+P  N F K+ QETFGKSG RRIVPG+ 
Sbjct: 61   TIRSIAAFRLTGGTKDYCIVGSDSGRIIVLEYDPKTNSFTKLQQETFGKSGSRRIVPGEM 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LAVDPKGR+VMI A EK KLVYVLNRD AA LTISSPLEAH++  I+++I G+D GF+NP
Sbjct: 121  LAVDPKGRSVMISAVEKSKLVYVLNRDAAANLTISSPLEAHRNGAIIHAIVGVDVGFENP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E+DY+E+D D TGQA   A+K LTFYELDLGLNHV RK SEP D  AN+LV VPG
Sbjct: 181  LFAALEVDYTESDADPTGQAFRNAEKMLTFYELDLGLNHVVRKSSEPTDRRANLLVQVPG 240

Query: 240  GG-------DGPSGVLVCAENFVIYK----NQGHPDVRAVIPRRADLPA---ERGVLIVS 285
            G        DGPSGVLVC E+ +IY+    + G    R  IPRR        ERG++I S
Sbjct: 241  GQSATTNAFDGPSGVLVCCEDHIIYRPVDLDGGAVSHRVPIPRRRTPWGGDEERGLIITS 300

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
            A  H+ K            D++KVTLEH++E V  + IKYFDT+P   S+C+LKSG+LF 
Sbjct: 301  AVMHKMKVC----------DLYKVTLEHEDEIVKSMTIKYFDTVPTATSLCILKSGFLFV 350

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQ-----PVFFQPRGLKNLVRIEQVE 400
            A+E GNH LYQFQ +G D D E   ++   +  G       P +F+P  L NLV  +++ 
Sbjct: 351  AAEGGNHHLYQFQKLG-DDDAEPEFTSNSYSNNGISSSPLPPCYFRPHPLDNLVLADEMT 409

Query: 401  SLMPIMDMRIANLF------------------------------EEEAPQIFTLCGRGPR 430
            S  PI+D RI NLF                              + + PQ +  CGRG R
Sbjct: 410  SFCPILDARILNLFGPTSGGMSAFTQRSDEPSLIVSYRIVPATLQSDTPQFYLACGRGAR 469

Query: 431  SSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVE 490
            SS R+LR GL V E   S+LPGVP+ VWTVK N  D++D YI++SF N TLVLSIGET+E
Sbjct: 470  SSFRMLRHGLEVEESVSSELPGVPNGVWTVKVNDGDQYDKYIILSFVNGTLVLSIGETIE 529

Query: 491  EVSDSGFLDTTPSLAVSLIGDD-SLMQVHPSGIRHIR-------EDGRINEWRTPGKRTI 542
            EV+D+GFL + P+LAV  + D+  L+QVHP G+RH+R           + EWR P  R +
Sbjct: 530  EVADTGFLSSAPTLAVQQLADNGGLIQVHPGGVRHVRPSQGDLASTAGVTEWRAPQGRQV 589

Query: 543  VKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACLDIASVPEGRKRSRF 601
                +N  QV +AL+ GEL+YFE+D+ G L E  E   +   V C+ IA VPEGR+    
Sbjct: 590  ASATTNTRQVCVALNSGELVYFELDLNGVLQEYGEMRAVGSAVVCMSIAEVPEGRQ---- 645

Query: 602  LAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLN 661
                                           P  S  FL  +  +G            L 
Sbjct: 646  -------------------------------PNGSNHFLGPRVDLGNH----------LV 664

Query: 662  AGLQNGVLFRTV-----VDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
             GL   V    V       +V    + +   FLG RP +L  V V     +L LSSR WL
Sbjct: 665  TGLSRHVWMLVVGLTNETSVVGAHGTSNVYFFLGTRPVRLTRVSVQRNTCILALSSRSWL 724

Query: 717  GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
             Y H+     +PL YE L++A SFS++ C EG++ +AG+ LR+F I +L +   +  +PL
Sbjct: 725  NYTHQNLLRFSPLIYENLDHAWSFSAELCPEGLIGIAGSVLRIFQIPKLSDKLKQVTMPL 784

Query: 777  RYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDD 836
             YTPR+  + P+ +L  +IE+D     +E +     E   A          +DQ      
Sbjct: 785  SYTPRKIAVHPEHQLFYVIESDHRTWGSEAKNKRLAELVRAG-------RQIDQ------ 831

Query: 837  ENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLL---ELQDNEAAFSICTVNFH 893
              +   L  E +G P+A + +W SCIR++DP     +  L   EL +NE+AFS+  V F 
Sbjct: 832  --ELVDLPAEDFGLPRAGAGQWASCIRIIDPTEVFCSATLFKIELDNNESAFSVAVVPFA 889

Query: 894  DKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK---TQVEGIPLALC 950
             +E+   L VGTAK     P++ +  G +     V+ G S  +L +   T+V+ +PLAL 
Sbjct: 890  ARENELFLVVGTAKDTNVLPRQCV--GAVTSGSLVKLGWSTHILTRPIQTEVDDVPLALL 947

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
              +GRL AG+G  LR+Y++GKK+LLRK ENK F   IV++ +   RI VG++QES H+  
Sbjct: 948  GIKGRLCAGVGKALRIYEMGKKKLLRKSENKGFATAIVTLTSQGSRIIVGEMQESVHYAT 1007

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            Y+ + N+L +FADD+  RW+T+A  +D+DT+A  DKFGNI+  RLP ++S ++++DPTG 
Sbjct: 1008 YKPESNRLLVFADDTSARWVTSAALVDYDTVAVGDKFGNIFVNRLPANISQQVDDDPTGA 1067

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFS 1130
             I  E+  L+GAP+K + +  ++VGD+VTS+ +A+LVPGG + V Y  + G++G ++  +
Sbjct: 1068 GIMHEREFLHGAPHKTKLLAHYNVGDIVTSVHRAALVPGGRDVVAYTGLHGTIGVLIPLA 1127

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
            S++DVDF + LE HMR EH  L GRDH+AYR  Y PVK V+DGDLCE+F  L    Q+ I
Sbjct: 1128 SKEDVDFITTLEQHMRSEHSSLVGRDHLAYRGYYVPVKAVVDGDLCERFAMLPSTKQKSI 1187

Query: 1191 ADELDRTPGEILKKLEEIR 1209
            A ELDRT GE+LKKLE +R
Sbjct: 1188 AGELDRTVGEVLKKLEGLR 1206


>gi|358060450|dbj|GAA93855.1| hypothetical protein E5Q_00501 [Mixia osmundae IAM 14324]
          Length = 1153

 Score = 1055 bits (2729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/1156 (45%), Positives = 755/1156 (65%), Gaps = 46/1156 (3%)

Query: 71   GSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVM 130
            G  KDYIV+GSDSGRIV+L Y+ + N F K+HQETFGKSG RR+VPGQYLAVDPKGR+VM
Sbjct: 21   GGSKDYIVLGSDSGRIVVLSYDATTNTFVKLHQETFGKSGSRRVVPGQYLAVDPKGRSVM 80

Query: 131  IGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSE 190
            I A EK KLVY+LNRD AA LTISSPLEA+K+H I++SI G+D GF+NP+FAA+E+DYSE
Sbjct: 81   IAAMEKTKLVYILNRDAAANLTISSPLEANKAHAIIHSIVGLDVGFENPLFAALEVDYSE 140

Query: 191  ADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGG-------DG 243
            +DQD TG A   A+K LT+YELDLGLNHV R+W++P D  ANML+ +PGG        DG
Sbjct: 141  SDQDDTGAAFEAAEKMLTYYELDLGLNHVIRRWTDPTDVRANMLIALPGGQSTTSEHFDG 200

Query: 244  PSGVLVCAENFVIYKNQGHPDVRAVIPRRAD--LPAERGVLIVSAATHRQKTLFFFLLQT 301
            PSGVLVC EN++IYK+QG P+ R  IP+R    L  +RG+LI ++  HR K  FF L+Q+
Sbjct: 201  PSGVLVCTENYIIYKHQGVPEHRVPIPKRDHPLLDPDRGLLITASVMHRMKGDFFILVQS 260

Query: 302  EYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIG 361
            E GD++KVT+E   E V  LKIKYFDT+PV +S+C+L+SG+LF ASEFGNH +YQF  +G
Sbjct: 261  EEGDLYKVTVERQEEEVLALKIKYFDTVPVASSLCILRSGFLFVASEFGNHNVYQFDKLG 320

Query: 362  ADPDVEASSSTL----METEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE 417
             D D E SS+      ME EE     FF+PR L+NLV +++++SL PI+D ++AN+   +
Sbjct: 321  DDGD-EVSSADYPSFGMEREE--PATFFKPRPLENLVLVDELDSLCPIVDAKVANVLGAD 377

Query: 418  APQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFN 477
            APQI T CGRG RSSL++LR GL V EM  S L   P+ +WT K   +D +D+YIV+S  
Sbjct: 378  APQIITACGRGHRSSLKMLRHGLEVEEMVSSGLGFEPTGLWTTKLKSDDTYDSYIVLSAP 437

Query: 478  NATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTP 537
             AT+VL+IGE++E+ S+SG ++   +L V  +GDDS++QVHP+G   +R DG    W   
Sbjct: 438  AATIVLTIGESIEQASNSGLVENQRTLCVQQVGDDSIVQVHPAGFLRVRADGSKEVWPLA 497

Query: 538  GKRTIVKVG-SNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG-DVACLDIASVPEG 595
             +R  + V  +N+ Q+V+A + G++IY   ++ G++   +  +  G  V  + I  + E 
Sbjct: 498  PERVNLAVACANQRQIVLATTSGDIIYLRCELDGEITVFDDRKQLGVSVTSMSIGELSED 557

Query: 596  RKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHP 655
            R ++ +L VG  D T+RI+SL   +C++ +S+Q++++ P S+   E+  S   +     P
Sbjct: 558  RLQTDYLCVGCEDQTVRIISLQEQNCLETISIQALTALPSSICIAEILDSSVDKT---RP 614

Query: 656  ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPW 715
             + F+N GLQNGVL RTV+D ++G+L+D+R+RFLG RP KL  + +G  + +L +SSR W
Sbjct: 615  TT-FVNIGLQNGVLLRTVLDPMSGRLTDTRTRFLGTRPVKLRRLAIGDSSGVLSISSRTW 673

Query: 716  LGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
            + Y H+G     PL  + L++A    ++ C EG++ V G+ LR+FT+ ++G      ++P
Sbjct: 674  VNYTHQGLLQFDPLISDPLDHATGLRAEVCPEGIIGVTGDTLRIFTLPKIGTKVKMDSIP 733

Query: 776  LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGD 835
            L  TPRR    P   L+ +I++D   L+   +E   K+  E +        N        
Sbjct: 734  LSLTPRRTAFHPAGTLLYMIQSDHRTLSPITQEEKAKDLMEPSEAMWTAEIN-------- 785

Query: 836  DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN--TTCLLELQDNEAAFSICTVNFH 893
                         G  +AE+ +W SCI ++DP      T   + L +NEAAFS+    F 
Sbjct: 786  -------------GLMRAEAGQWSSCISIIDPTEPENATVTQIYLDNNEAAFSVAVAQFA 832

Query: 894  DKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQ 953
            ++     L VGTA+     P R    G+I  Y   E G+SLELLHKT+++ +PL++  FQ
Sbjct: 833  ERPGKWFLLVGTAQDTTVSP-RTCTHGFIRTYEITEAGRSLELLHKTELDDVPLSIAAFQ 891

Query: 954  GRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRR 1013
            GR + G+G  LRLY +GK RLLRK ENK FP  +VS+     RIY  D Q+S +F  Y+ 
Sbjct: 892  GRAVVGVGRALRLYTMGKSRLLRKSENKSFPAAVVSLQVQGSRIYASDAQDSVYFVAYKA 951

Query: 1014 DENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIK 1073
             +N+L IFADD+  RW+T    +D+DT+A  DKFGN++  R+ + VS++++ED TG  I 
Sbjct: 952  ADNRLLIFADDTQQRWITCNTVVDYDTVASGDKFGNVFVSRVDKLVSEDVDEDQTGAGIL 1011

Query: 1074 WEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRD 1133
             E+    GAP++++ +  F+VGD++T +QK SLV GG E ++Y  + G++G ++ F S++
Sbjct: 1012 HEKPLFMGAPHRLQLLTHFNVGDILTCIQKVSLVAGGREILLYTCLGGTVGMLIPFISKE 1071

Query: 1134 DVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADE 1193
            DV+F S LEMHMR E+P + GRDH+AYR  Y P K  +DGDLCE F  L +  Q +IA E
Sbjct: 1072 DVEFSSTLEMHMRAENPSIVGRDHLAYRGYYVPQKATVDGDLCETFALLPMQKQAQIAGE 1131

Query: 1194 LDRTPGEILKKLEEIR 1209
            LDR+  E+LKK++ +R
Sbjct: 1132 LDRSVSEVLKKIDSMR 1147


>gi|390357128|ref|XP_001198237.2| PREDICTED: splicing factor 3B subunit 3-like [Strongylocentrotus
            purpuratus]
          Length = 949

 Score = 1053 bits (2723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/955 (53%), Positives = 690/955 (72%), Gaps = 21/955 (2%)

Query: 269  IPRR---ADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKY 325
            IPRR    D P ERG++ V +ATH+ K++FFFL QTE GDIFK+TLE D++ V+E+++KY
Sbjct: 3    IPRRRNDLDDP-ERGMIFVCSATHKTKSMFFFLAQTEQGDIFKITLETDDDMVTEIRMKY 61

Query: 326  FDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDV-EASSSTLMETEEGFQPVF 384
            FDT+PV  SM VLK+G+LF ASE+GNH LYQ   +G D D  E SS+T +E  + F   F
Sbjct: 62   FDTVPVATSMNVLKTGFLFIASEYGNHYLYQIAHLGDDDDEPEFSSATPLEEGDTF---F 118

Query: 385  FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSE 444
            F PR L+NL  ++Q+ESL PI+  +IA+L  E+ PQ++  CGRGPRSS+R+LR GL VSE
Sbjct: 119  FAPRTLRNLEEVDQLESLSPILSCQIADLASEDTPQLYVACGRGPRSSMRVLRHGLEVSE 178

Query: 445  MAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSL 504
            MAVS+LPG P+AVWTVKK  +DE+DAYI+VSF NATLVLSIGETVEEV+DSGFL TTP+L
Sbjct: 179  MAVSELPGNPNAVWTVKKKSDDEYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTL 238

Query: 505  AVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYF 564
            + SLIGDD+L+Q++P GIRHIR D R+NEW+TPGK++IVK   N+ QVVIAL+GGE++YF
Sbjct: 239  SSSLIGDDALLQIYPDGIRHIRADKRVNEWKTPGKKSIVKCAVNQRQVVIALTGGEMVYF 298

Query: 565  EVDMTGQLLE-VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQ 623
            E+D TGQL E  E+ EM+ DV C+ +A+VP G +R+RFLAVG  DNT+R++SLD  DC+Q
Sbjct: 299  EMDPTGQLNEYTERKEMNADVKCMSLATVPSGEQRARFLAVGLDDNTVRVISLDQSDCLQ 358

Query: 624  ILSVQSVSSPPESLLFLEVQASVGGEDGADHPAS--LFLNAGLQNGVLFRTVVDMVTGQL 681
             LS+Q++ +P E+L  +E+  +   E+  +  +S  LFLN GLQNGVL R V+D VTG L
Sbjct: 359  PLSMQALPAPAEALCIIEMGGTEAREETGERGSSGGLFLNIGLQNGVLLRMVLDSVTGDL 418

Query: 682  SDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFS 741
            SD+R+R+LG RP KLF + + G  A+L +SSR WL Y ++ RF LTPLSYETLE+A+ F+
Sbjct: 419  SDTRTRYLGSRPVKLFRINMQGSEAVLAMSSRSWLSYWYQSRFHLTPLSYETLEFASGFA 478

Query: 742  SDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGA 801
            S+QC EG+V+++ N LR+  +E+LG  FN+ +  L+YTPR+F +  +   +V+IETD   
Sbjct: 479  SEQCPEGIVAISTNTLRILALEKLGAVFNQVSTQLKYTPRKFAVHLENNNIVVIETDHNT 538

Query: 802  LT----AEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDK 857
             T    A+ ++   +E  EAAG  E      +      +    + L +  +  PKA S  
Sbjct: 539  YTDSTKAQRKQQMAEEMVEAAGEEEK-----ELAAEMAEAFLQEELPESTFSSPKAGSGM 593

Query: 858  WVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNI 917
            W S IR+L+P    T  ++EL+ NEAAFS+  V F ++E  T + VGTAK +   P R  
Sbjct: 594  WASTIRLLNPVQGQTLDMVELEQNEAAFSLALVKFANREDETHVLVGTAKDVTLSP-RTC 652

Query: 918  VAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK 977
              G IH Y   EEGK LE LHKT V+ +P ++  FQGR+L GIG +LR+YDLGKK+LLRK
Sbjct: 653  SGGAIHTYLLTEEGKKLEFLHKTLVDDVPSSIAAFQGRVLIGIGRLLRIYDLGKKKLLRK 712

Query: 978  CENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHID 1037
            CENK  PN I +I T  +R+ + D+QES HF KY+R ENQ+ IFADDS PRW+TA   +D
Sbjct: 713  CENKHIPNFITNILTTGNRVIISDVQESLHFLKYKRQENQMVIFADDSNPRWITATCLLD 772

Query: 1038 FDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDV 1097
             DT+  ADKFGNI  +RLP  V+D ++EDPTG K  W++G LNGA  K + +  F +G+ 
Sbjct: 773  HDTVMCADKFGNITVLRLPTSVNDNLDEDPTGVKALWDRGLLNGASQKTDVVSSFFIGET 832

Query: 1098 VTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDH 1157
            V SLQKA+L+PGG ESV+Y T+ G++G ++ F++ +D DFF HLEMHMR E+ PLCGRDH
Sbjct: 833  VLSLQKATLIPGGSESVVYTTLSGAIGVLVPFTAHEDHDFFQHLEMHMRSEYAPLCGRDH 892

Query: 1158 MAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            ++YRS Y+PVK+VIDGDLCEQ+ ++ L  QR +A+ELDR P E+ KKLE+IR + 
Sbjct: 893  LSYRSYYYPVKNVIDGDLCEQYNSMELSKQRTVAEELDRNPSEVSKKLEDIRTRF 947


>gi|118400837|ref|XP_001032740.1| CPSF A subunit region family protein [Tetrahymena thermophila]
 gi|89287084|gb|EAR85077.1| CPSF A subunit region family protein [Tetrahymena thermophila SB210]
          Length = 1197

 Score = 1047 bits (2707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/1232 (45%), Positives = 784/1232 (63%), Gaps = 55/1232 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE--NSGRIETLVSTEIF 58
            M LYSLTL QPT I+ A+ GNFSG K  EI VA+GKVLE+L P+  NSG++  + S E+F
Sbjct: 2    MNLYSLTLLQPTAILKAVYGNFSGPKAQEIAVAKGKVLEILTPDENNSGKLRVVHSEEVF 61

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G IR++  FRL G  +DYI+VGSDSGRIVIL++N  K  F+K+HQET+GK+GCRRIVPGQ
Sbjct: 62   GIIRTINIFRLHGQTQDYIIVGSDSGRIVILKFNKEKGEFEKVHQETYGKTGCRRIVPGQ 121

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            Y+AVDPKGRA M  A EKQK VY+LNRD   +LTISSPLEAHKSHT+ Y I GID G++N
Sbjct: 122  YIAVDPKGRACMFAAIEKQKFVYILNRDNEDKLTISSPLEAHKSHTLCYDIIGIDVGYEN 181

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
              FA IE DY E +Q  +     + QK LT YELD GLNHV +K SEP+   A+ML+ VP
Sbjct: 182  SQFACIECDYGEVEQKDSAVHTGQIQKQLTIYELDFGLNHVVKKSSEPIPETAHMLLPVP 241

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKT----L 294
            G  DGP GVL+  E+ +IYK     +++   P+R    +   ++I S    +QK+    L
Sbjct: 242  GLPDGPGGVLIACEDMLIYKGNNQ-ELKCRYPQRF---STSKIMINSFGFLKQKSKNQNL 297

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
             FFLLQTE GD+FK+ ++  ++ V  L ++YFD+IP   S+C+ K+G+LFAA E G+H L
Sbjct: 298  SFFLLQTELGDLFKLQIKSTDDKVHGLTLQYFDSIPTAISICITKTGHLFAACEKGDHLL 357

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
            Y+F+++G   +   + +T  + E   Q   F PR L NL +++ +++L  I D+++ +L 
Sbjct: 358  YRFKSLGEQEE-RPTKTTSADFE---QQAIFIPRKLVNLEQVDSLDNLSAISDIKVNDLT 413

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
             E  PQI+ LC  G RS+LRILR GL VSE A S+LP  P+ +WT+K+  ++    YIV+
Sbjct: 414  GEGNPQIYALCAAGSRSTLRILRHGLQVSEYATSRLPLRPNGIWTIKQRHDEGLTKYIVL 473

Query: 475  SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEW 534
            S +  T VLSI +T+  V+DS     + +L   ++ ++ ++QV P   R IR D R+  +
Sbjct: 474  SSSKKTYVLSIKDTISAVNDSSLDTNSQTLHAGILENNCIIQVTPESFRQIR-DNRVTLY 532

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGG------ELIYFEVDMTGQLLEVE-KHEMSGDVACL 587
            +T   +  VK  SN  Q+ +AL GG      ++IYFE D+ GQL  +E K +++ D+ C+
Sbjct: 533  KTESNK-FVKACSNSRQIALALQGGQGQPGGDIIYFEFDLGGQLKRIEEKAKLTSDIECI 591

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
            DI  VP GR + +FLAVG  D T+RILSL+ D  +Q LS+Q++   PES+  +E++   G
Sbjct: 592  DIGEVPIGRPKFKFLAVGCKDQTVRILSLEQDQYLQRLSLQALPGIPESVSLIEMKRGTG 651

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
             E  A+    L+L  GLQNG+L R  VD VTG LSD R+R L   P +    VV G+ A+
Sbjct: 652  TEQEAEE-YQLYLFVGLQNGILLRATVDQVTGSLSDVRTRVLSAAPIRTCKYVVQGQPAL 710

Query: 708  LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF------SSDQCVEGVVSVAGNALRVFT 761
            L LS+RPW+ Y + G++ + P+SY+ LEYAA           QC+   VS +G ++R+  
Sbjct: 711  LALSTRPWICYTYLGKYQMVPISYDMLEYAAPAVFNMQGEQKQCI---VSTSGESVRIIE 767

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
             ++ G+  N+  + LRY+PR+  +  +   +V+IE+D         E+ KK+  E     
Sbjct: 768  PQKYGDLLNQQVIKLRYSPRKMAIHERSHNIVLIESDNKVYN----ESQKKQLIEQYYSN 823

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
            +N          GD   + D L+        A S  W SC+R++DP +  T  + EL++N
Sbjct: 824  QN---------KGDLATQVDLLT--------APSGNWASCVRIVDPVTRKTLNIYELENN 866

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            E A S+C VNF +K+  T + VGT K  Q  P RN    YI+ ++  E+  +LELLHKT+
Sbjct: 867  EHALSMCMVNFDNKDE-TYVCVGTVKDYQVHPNRNFSVCYINTFQLNEKLNTLELLHKTE 925

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            +  IP AL   +G+LLAG G  LR Y+LGKK+LL+K E K   + +  I T+ DRIYV  
Sbjct: 926  IFEIPGALHAHKGKLLAGCGTFLRYYELGKKKLLKKAEIKGLQSPVNGIQTFGDRIYVSM 985

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            + +S H  KYR  +   Y   DD +PRW+++   +D+ T  G DKF N +  R+P +  +
Sbjct: 986  VADSVHVLKYRSKDQTFYEVCDDILPRWMSSFQVLDYHTYIGGDKFENAFVCRVPSNADE 1045

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
            E+EE+P   K++WE G LNGAP K E+I  F+ G+V+T+LQKASLV  G E V+YGT MG
Sbjct: 1046 EMEENPMAYKLRWETGYLNGAPFKTEQICHFYAGEVITTLQKASLVSTGNEIVLYGTSMG 1105

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPT 1181
            S+GA L F +++D+DFF HLEM++R +  PL GRDH+ +RS Y PVK VIDGDLCEQF  
Sbjct: 1106 SIGAYLPFQTKEDIDFFIHLEMYLRLDVLPLAGRDHVMFRSFYGPVKSVIDGDLCEQFIK 1165

Query: 1182 LSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            LS   Q+ +ADE+DR P E+ KKL+EIRNKI+
Sbjct: 1166 LSSGKQKVLADEMDRHPHEVHKKLDEIRNKIL 1197


>gi|156095699|ref|XP_001613884.1| Splicing factor 3B subunit 3 [Plasmodium vivax Sal-1]
 gi|148802758|gb|EDL44157.1| Splicing factor 3B subunit 3, putative [Plasmodium vivax]
          Length = 1230

 Score = 1046 bits (2705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/1244 (44%), Positives = 799/1244 (64%), Gaps = 50/1244 (4%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTLQ+PT I     GNFSG K  EIVV++G+VLELLR +  G++  + S +IFG IR
Sbjct: 4    LYHLTLQKPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIASKDIFGIIR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
             L  FRLTGS KDY+V+GSDSGR+ IL+++  KN F ++H ET+GKSG RRI+PG+Y+AV
Sbjct: 64   CLQTFRLTGSNKDYVVIGSDSGRLTILQFSNEKNDFVRVHCETYGKSGLRRIIPGEYIAV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGRA+MI A E+QK VY+LNRDT  +LTISSPL+AHKSHTI + + G+D GF+NP+FA
Sbjct: 124  DPKGRALMICAIERQKFVYILNRDTKEQLTISSPLDAHKSHTICHDVVGMDVGFENPMFA 183

Query: 183  AIELDYSEADQD--STGQAASEAQKN-LTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +IE +Y   D+   +T +  S  +K  L+ +E+DLGLNHV RK++ P+D  A++L+ +PG
Sbjct: 184  SIEQNYEALDKQVTNTSEIDSYTRKTLLSLWEMDLGLNHVIRKYTFPIDASAHLLIPIPG 243

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
            G  GPSGV+VC +NF++YK   H DV    PRR +   E+ + IV +  HR +  FF L+
Sbjct: 244  GQQGPSGVIVCCDNFLVYKKVDHADVYCAYPRRLETGQEKNLSIVCSTLHRIRKFFFILI 303

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            Q+E GD++K+ +EH++  V E+  KYFDT+PV  ++CV+KSG LF A+EFGNH  YQF  
Sbjct: 304  QSELGDLYKIEMEHEDGVVKEITCKYFDTVPVANAICVMKSGSLFVAAEFGNHFFYQFSG 363

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            IG D D EA  ++   +      + F+ + L NL  I+QV SL PI+DM++ +     +P
Sbjct: 364  IG-DEDNEAMCTSKHPSGRN-AIIAFRTKKLTNLFLIDQVYSLSPILDMKVIDAKNASSP 421

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QI+ LCGRGPRSSLRIL+ GL++ E+A ++LPG P  +WT+KK+   ++D YI+VSF  +
Sbjct: 422  QIYALCGRGPRSSLRILQHGLSIEELADNELPGRPKFIWTIKKDNASDYDGYIIVSFEGS 481

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR-INEWRTPG 538
            TL+L IGETVEEV DS  L    ++ V+++ D+SL+QVH +GIRHI  +G+ I+EW  P 
Sbjct: 482  TLILEIGETVEEVVDSLLLTNVTTIHVNILYDNSLIQVHDAGIRHI--NGKVIHEWVPPK 539

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
             + I    SN  Q+VI+LSGGEL+YFE+D +  L+E  +  ++ +  CL I  V E + R
Sbjct: 540  NKQIKAATSNCAQIVISLSGGELLYFEIDESHTLVETFRKNLNVETLCLSIQQVQENKLR 599

Query: 599  SRFLAVGSYDNTIRILSLDPDDCMQILS--VQSVSSPPESLLFLEVQASVGGEDGADHPA 656
            + FLAVG  DN +R+LS++ +     LS  +   +S  + +   E+      E G D   
Sbjct: 600  ANFLAVGCLDNVVRLLSIEKEKYFNQLSTFILPNNSSAQDICITEM-----SELGNDKER 654

Query: 657  S-LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPW 715
              LFLN GL NGVL R+VVD +TG L++  S++LG +  K+  V V   AA+L L  + +
Sbjct: 655  KLLFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHVKKNAALLVLCEKTY 714

Query: 716  LGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
            L Y+H+G+++ +PL+Y+ LEYA+SF S+QC +G V+++G++LR+F   RLGE F++  L 
Sbjct: 715  LCYVHQGKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRIFRFYRLGEVFSQNILH 774

Query: 776  LRYTPRRFV------------------LQPKKKLMVIIETDQGAL---TAEEREAAKKEC 814
            L +TPR+ V                   Q   +++ IIE D  +    T  E + A K  
Sbjct: 775  LTFTPRKIVPLPFPSLFYDHDTSLEIERQKNIRMLAIIEADHNSYDENTLSEIQRALKGI 834

Query: 815  FEAAGMGENGNGNMDQM-ENGD-DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT 872
                   + G+ ++ Q+ ENGD +E + + L  ++ G  KA   KW SCI+++ P +  T
Sbjct: 835  QLDGEDAQGGSASVQQLRENGDAEEEEEEELLYDRIGTVKAGPGKWGSCIKIIHPVNLQT 894

Query: 873  TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK 932
               + L+  EAA S+C       E    L VGT   L     R+  A  + +Y + +   
Sbjct: 895  IDKISLEMEEAALSVCACEL---EALHCLIVGTTTSLSL-KNRSAPAAALRVYTY-DINY 949

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINT 992
             L LLH T VE  P   C F GRLLA IG  LR+Y LGKK+LL+KCE K  P  I+SI  
Sbjct: 950  KLNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYALGKKKLLKKCEYKDIPEAIISIKV 1009

Query: 993  YRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
              DRI+  DI+ES     Y  + N L + +DD +PRW+T +  +D  T+  ADKF +++ 
Sbjct: 1010 SGDRIFASDIRESVLIFFYDANMNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFV 1069

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNK---MEEIVQFHVGDVVTSLQKASLVPG 1109
            +R+P++     EE     K  W  G++    NK   +E I+ FHVG++VTSLQK  L P 
Sbjct: 1070 LRVPEEAKQ--EEYGISNKC-WYGGEIMAGSNKNRRLEHIMSFHVGEIVTSLQKVKLSPT 1126

Query: 1110 GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKD 1169
              E +IY T+MG++GA + + ++++++   HLE+ +R E+PPLCGR+H+ +RS Y PV+ 
Sbjct: 1127 SSECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTENPPLCGREHIFFRSYYHPVQH 1186

Query: 1170 VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            VIDGDLCEQF +L  D+QRK+A +L+RTP +IL+KLE+IRNKI+
Sbjct: 1187 VIDGDLCEQFSSLPYDVQRKVAADLERTPDDILRKLEDIRNKIL 1230


>gi|197246825|gb|AAI68883.1| Sf3b3 protein [Rattus norvegicus]
          Length = 908

 Score = 1040 bits (2688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/917 (55%), Positives = 674/917 (73%), Gaps = 23/917 (2%)

Query: 306  IFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPD 365
            IFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LYQ   +G D D
Sbjct: 1    IFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDD-D 59

Query: 366  VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLC 425
             E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  E+ PQ++  C
Sbjct: 60   EEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQLYVAC 118

Query: 426  GRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI 485
            GRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VSF NATLVLSI
Sbjct: 119  GRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSI 178

Query: 486  GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKV 545
            GETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+TPGK+TIVK 
Sbjct: 179  GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKC 238

Query: 546  GSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPEGRKRSRFLAV 604
              N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP G +RSRFLAV
Sbjct: 239  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 298

Query: 605  GSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPAS------L 658
            G  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  D          L
Sbjct: 299  GLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDELGERGSIGFL 354

Query: 659  FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGY 718
            +LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L +SSR WL Y
Sbjct: 355  YLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSY 414

Query: 719  IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRY 778
             ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  FN+ A PL+Y
Sbjct: 415  SYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQY 474

Query: 779  TPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENGNGNMDQMENG 834
            TPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E      +     
Sbjct: 475  TPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELA-AEMAAAF 533

Query: 835  DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD 894
             +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAAFS+    F +
Sbjct: 534  LNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSN 589

Query: 895  KEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQG 954
                  + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE +P A+  FQG
Sbjct: 590  TGEDWYVLVGVAKDLILSP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQG 648

Query: 955  RLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRD 1014
            R+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QESF + +Y+R+
Sbjct: 649  RVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRN 708

Query: 1015 ENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKW 1074
            ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W
Sbjct: 709  ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 768

Query: 1075 EQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDD 1134
            ++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +D
Sbjct: 769  DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHED 828

Query: 1135 VDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADEL 1194
             DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++EL
Sbjct: 829  HDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEEL 888

Query: 1195 DRTPGEILKKLEEIRNK 1211
            DRTP E+ KKLE+IR +
Sbjct: 889  DRTPPEVSKKLEDIRTR 905


>gi|302406266|ref|XP_003000969.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
 gi|261360227|gb|EEY22655.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
          Length = 1059

 Score = 1038 bits (2685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/1075 (49%), Positives = 726/1075 (67%), Gaps = 51/1075 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M+LYSLT+Q PT +  A+ G F+GT+   I+ A G  + L+RP+ + G++ T++S ++FG
Sbjct: 7    MFLYSLTVQPPTNVTLAVLGQFAGTREQYIITASGSRITLVRPDAAQGKVVTVLSHDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+A FR+ GS KDY+++ +DSGRI I+EY P++N F ++H ETFGKSG RR+VPG++
Sbjct: 67   IIRSMAAFRIAGSNKDYLILATDSGRIAIIEYLPAQNRFQRLHLETFGKSGIRRVVPGEF 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA +I + EK KLVYVLNR++ A LTISSPLEAHK    V S+  +D G+ NP
Sbjct: 127  LACDPKGRACLIASLEKNKLVYVLNRNSQAELTISSPLEAHKPGVHVLSMVALDVGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FAA+E DY+EADQD TGQAA + +  L +YELDLGLNHV RKWSEPVDN A++L  VPG
Sbjct: 187  VFAALETDYTEADQDPTGQAALDVETQLVYYELDLGLNHVVRKWSEPVDNTASLLFQVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
            G DGPSGVLVC E  + Y++      R  +PRR  A     R   IV+   H+ K     
Sbjct: 247  GNDGPSGVLVCGEENITYRHSNQEAFRVPVPRRRGATEDPSRKRSIVAGVMHKLKGSAGA 306

Query: 295  FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            FFFLLQTE GD+FK+T++       +    V  LKIKYFDTIPV +S+C+LKSG+L+ AS
Sbjct: 307  FFFLLQTEDGDLFKITIDMIEDRDGNPTGEVKRLKIKYFDTIPVASSLCILKSGFLYVAS 366

Query: 348  EFGNHALYQFQAIG-ADPDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            +FGN+  YQF+ +G  D ++E SS     + ++ ++ VFF PR L+NL  +E ++S+ P+
Sbjct: 367  QFGNYQFYQFEKLGDDDEELEFSSDDFPTDPKQSYEAVFFHPRELENLALVESIDSMNPL 426

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D ++ANL  E+APQI+T CG G RS+ RIL+ GL V+E+  S+LPG+PSAVWT+K +  
Sbjct: 427  IDCKVANLTGEDAPQIYTACGNGARSTFRILKHGLEVNEIVASELPGIPSAVWTLKLSRG 486

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D++DAYIV+SF NATLVLSIGETVEEV+DSGFL + P+LA  L+G + L+QVHP GIRHI
Sbjct: 487  DQYDAYIVLSFTNATLVLSIGETVEEVNDSGFLTSVPTLAAQLLGGEGLIQVHPKGIRHI 546

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDV 584
            R +G++NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM G V
Sbjct: 547  R-NGQVNEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMFGTV 605

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
             CL +  VPEGR RS FLAVG  D+T+R+LSLDP+  ++  SVQ++++PP SL      A
Sbjct: 606  TCLSLGEVPEGRLRSSFLAVGCDDSTVRVLSLDPETTLESKSVQALTAPPTSL------A 659

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             +  ED +   ++L+L+ GL +GV  RTV+D VTG+L+D+R +FLG +P KLF V V GR
Sbjct: 660  VIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPVKLFQVTVQGR 719

Query: 705  AAMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
              +L LSSRPWLGY   I +G F++TPL+Y  LE+  +FSS+QC EGVV + G +LR+F 
Sbjct: 720  TCVLGLSSRPWLGYADPITKG-FVVTPLNYVDLEWGWNFSSEQCEEGVVGIQGQSLRIFA 778

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            IE+L +T  + ++PL YTPRR V  P+  +   IE+D   L  E R     +        
Sbjct: 779  IEKLSDTLTQKSIPLTYTPRRMVKHPEHPMFYTIESDNNTLPPELRAQLLAD-------- 830

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQ 879
                     + NGD       L   ++GYP+A+  +W SCI V+DP S     L  ++L 
Sbjct: 831  -------PSVVNGDART----LPPVEFGYPRAKG-RWASCISVIDPLSEELQTLQTVDLD 878

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
            +NEAA S   V F  +++ + L VGT K +   P R    GYIHIYRF E+G+ LE +HK
Sbjct: 879  NNEAAVSAAIVPFTSQDNESFLVVGTGKDMIVNP-RQFTEGYIHIYRFSEDGRELEFIHK 937

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
            T+VE  P AL  FQGRL+AG+G  LR+YDLG+K++LRK +  + P  IVS++T   RI V
Sbjct: 938  TKVEEPPTALLAFQGRLVAGVGKTLRIYDLGQKQMLRKAQADVAPQLIVSLSTQGSRIVV 997

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            GD+Q+   +  Y+   N+L  F DD+V RW+T    +D+++ +  DKF ++Y  R
Sbjct: 998  GDVQQGVTYVVYKALSNKLIPFVDDTVARWMTCTTMVDYES-SLRDKFAHLYRAR 1051


>gi|68531971|ref|XP_723667.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23478038|gb|EAA15232.1| Drosophila melanogaster CG13900 gene product [Plasmodium yoelii
            yoelii]
          Length = 1235

 Score = 1036 bits (2680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/1252 (43%), Positives = 800/1252 (63%), Gaps = 61/1252 (4%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTLQ+PT I   + GNFSG K  EIVVA+G+VLELLR +  G++  +VS ++FG IR
Sbjct: 4    LYHLTLQKPTAITRTVYGNFSGPKAHEIVVAKGQVLELLRADKQGKLNVIVSKDVFGIIR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            SL  FRL GS KDYI +GSDSGR+VIL+Y+  KN F ++H ET+GKSG RRI+PG+Y+A+
Sbjct: 64   SLEIFRLLGSNKDYIAIGSDSGRLVILKYDDEKNDFIRVHCETYGKSGIRRIIPGEYIAI 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGRA+M+ A EKQK VY+LNRD    LTISSPLEAHKSH+I +++  ++ GF+NP+F 
Sbjct: 124  DPKGRALMLCAIEKQKFVYILNRDNKENLTISSPLEAHKSHSICHAVVALNVGFENPMFV 183

Query: 183  AIELDYSEADQ---DSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +IE +Y   D+   ++  Q     +K L F+E+DLGLNHV +K + P+D  A++L+ +PG
Sbjct: 184  SIEQNYENLDKQVLNANEQIMEYPKKGLCFWEMDLGLNHVIKKHTIPIDITAHLLIPLPG 243

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
            G  GPSG++VC EN+++YK   H D+    PRR ++  E+ + IV    HR KT FF L+
Sbjct: 244  GQQGPSGLIVCCENYLVYKKIDHDDIFCSYPRRLEVGEEKNISIVCWTIHRIKTFFFILI 303

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            Q+EYGD++K+ + H++  V E+  KYFDT+P+  S+CVLKSG LF A+EFGNH  YQF  
Sbjct: 304  QSEYGDLYKIEVNHEDGIVKEIICKYFDTVPIANSICVLKSGALFVAAEFGNHFFYQFSG 363

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            IG D +    +S     +     + F+ + LKNL  ++Q+ SL PI+DM+I +      P
Sbjct: 364  IGNDSNDAMCTSNHPSGKNAI--IAFKTQKLKNLYLVDQIYSLSPIVDMKILDAKNSNLP 421

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QI+ LCGRGPRSSLRIL+ GL++ E+A ++LPG P  +WTVKK+ + E+D YI+VSF   
Sbjct: 422  QIYALCGRGPRSSLRILQHGLSIEELANNELPGKPRYIWTVKKDNSSEYDGYIIVSFEGN 481

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI-NEWRTPG 538
            TL+L IGETVEEV DS  L    ++ ++L+ D+S +QV+ +GIRHI  +G+I  EW  P 
Sbjct: 482  TLILEIGETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTGIRHI--NGKIVQEWIPPK 539

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
             + I    SN  Q+V++LSGGELIYFE+D +  L E+ +  ++ ++ CL I  + + + R
Sbjct: 540  NKQINAATSNGSQIVVSLSGGELIYFEIDESHTLTEIFRKNINVEILCLSIQQIQQNKLR 599

Query: 599  SRFLAVGSYDNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQASVGGEDGADHPA 656
            + FLAVG  DN +R+LS++ D   + LS   +  +S P+ +   E++  +G +   +H  
Sbjct: 600  ASFLAVGCLDNVVRLLSIEKDQYFKQLSTYILPNNSSPQDICISEMK-ELGNQ--KEHTI 656

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
             L+LN GL  GVL R+V+D + G LS+  S++LG +  K+  V V    A+L LS + +L
Sbjct: 657  -LYLNIGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPALLVLSEKTYL 715

Query: 717  GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
             Y+++G+++ +PL+Y+ LEYA+SF S+QC +G V+++GN+LR+F   RLGE F++  L L
Sbjct: 716  CYVYQGKYIYSPLNYDVLEYASSFYSEQCSDGYVAISGNSLRIFRFYRLGEVFSQNILHL 775

Query: 777  RYTPRRFV--------------LQPKK----KLMVIIETDQGAL---TAEEREAAKKECF 815
             +TPR+ V              L+ K+    +++ IIE D  A    T +E + A ++  
Sbjct: 776  TFTPRKIVPLPFPSLFYDNDTSLEIKRIKNIQMLAIIEADHNAYDENTQQEIQKALRD-I 834

Query: 816  EAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL 875
            +  G GE  +G  D+ EN ++E  YD +     G PKA   KW SCI++++P +      
Sbjct: 835  KLEGKGETQDGG-DEQENDEEELLYDRI-----GTPKAGLGKWGSCIKIINPINLQIIDK 888

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            + L+  EAA S+C       E    L VGT   +     RN+ +  + +Y + +    L 
Sbjct: 889  ISLELEEAALSVCACEL---EALHCLIVGTTTNMTL-KNRNVPSASLRVYTY-DINYKLN 943

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
            LLH T +E  P   C F GR++  +G  LR+Y LGKK+LL+KCE K  P  IVSI    D
Sbjct: 944  LLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYALGKKKLLKKCEYKDIPEAIVSIKVSGD 1003

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            RI+  DI+ES     Y  ++N + + +DD +PRW+T +  +D  T+  ADKF +++ +R+
Sbjct: 1004 RIFASDIRESVLIFFYDSNQNLIRLISDDIIPRWITCSEILDHHTIIAADKFDSVFILRV 1063

Query: 1056 P----------QDVSDEIEEDPTGGKIK-WEQGKLNGAPN---KMEEIVQFHVGDVVTSL 1101
                         V +E +++  G   K W  G++  +     KME I+ FH+G++VTSL
Sbjct: 1064 SLLTFFITPFCHLVPEEAKQEEYGIANKCWYGGEVINSSTKNRKMEHIMSFHIGEIVTSL 1123

Query: 1102 QKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
            QK  L P   E +IY T+MG++GA + + S+++++   HLE+ +R E   LCGR+H+ +R
Sbjct: 1124 QKVKLSPTSSECIIYSTIMGTIGAFIPYDSKEELELTQHLEIILRTEKHSLCGREHIFFR 1183

Query: 1162 SAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            S Y PV+ VIDGDLCEQF +L  ++QRKI  +L++TP EIL+KLE+IRNKI+
Sbjct: 1184 SYYHPVQHVIDGDLCEQFSSLPFEVQRKIGSDLEKTPDEILRKLEDIRNKIL 1235


>gi|154295205|ref|XP_001548039.1| pre-mRNA splicing factor 3b [Botryotinia fuckeliana B05.10]
          Length = 1020

 Score = 1031 bits (2666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/1016 (51%), Positives = 696/1016 (68%), Gaps = 48/1016 (4%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFGA 60
           +LYSLT+  PT I  AI G F+GTK  +IV A G  L L RP+ S G+I T +S ++FG 
Sbjct: 8   FLYSLTINPPTAITQAILGQFAGTKEQQIVTASGSRLTLHRPDPSQGKIITALSHDVFGI 67

Query: 61  IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
           IR++A FRL GS KDYI++ SDSGRI I+E+ P++N F+++H ETFGKSG RR+VPGQYL
Sbjct: 68  IRAIAAFRLAGSNKDYIIITSDSGRITIVEFVPAQNKFNRLHLETFGKSGVRRVVPGQYL 127

Query: 121 AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
           AVDPKGRA +  + EK KLVYVLNR++ A LTISSPLEAHK+ T+V+++  +D G+ NP+
Sbjct: 128 AVDPKGRACLTASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALVALDVGYANPV 187

Query: 181 FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
           FAA+E+DY E+DQD TGQA  E +K L +YELDLGLNHV RKWSEPVD  AN+L  VPGG
Sbjct: 188 FAALEIDYGESDQDPTGQAYDEIEKQLVYYELDLGLNHVVRKWSEPVDRTANILFQVPGG 247

Query: 241 GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TLF 295
            DGPSGVLVC E+ + Y++      R  IPRR  A    +R   IV+   H+ K     F
Sbjct: 248 TDGPSGVLVCGEDNITYRHSNQEAFRVAIPRRRGATEDPQRKRNIVAGVMHKLKGAAGAF 307

Query: 296 FFLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
           FFLLQT+ GD+FK+T+   E DN      V  LKIKYFDT+PV  S+C+LKSG+LF ASE
Sbjct: 308 FFLLQTDDGDLFKITIEMVEDDNGQPTGEVRRLKIKYFDTVPVATSLCILKSGFLFVASE 367

Query: 349 FGNHALYQFQAIGADPDVEASSSTLMET--EEGFQPVFFQPRGLKNLVRIEQVESLMPIM 406
           FGNH  YQF+ +G D +     S    T   E + P++F PR  +NL  +E ++S+ P+M
Sbjct: 368 FGNHQFYQFEKLGDDDEETEFVSDDFPTGAHESYTPIYFHPRPAENLSLVESIDSMNPLM 427

Query: 407 DMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
           D ++ANL +E+APQI+++CG G RS+ R L+ GL VSE+  S+LPGVPSAVWT K    D
Sbjct: 428 DCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPGVPSAVWTTKLTRGD 487

Query: 467 EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
            +DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHIR
Sbjct: 488 TYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIR 547

Query: 527 EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVA 585
            D R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V 
Sbjct: 548 ADHRVNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGTVT 607

Query: 586 CLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQAS 645
           CL +  VPEGR+RS+FLAVG  D+T+RILSLDPD  ++  SVQ+++SPP +L  + +  S
Sbjct: 608 CLSLGEVPEGRQRSQFLAVGCDDSTVRILSLDPDSTLENKSVQALTSPPNALSIMAMSDS 667

Query: 646 VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
             G       ++L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KLF V V G+ 
Sbjct: 668 SSGG------STLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVAVQGQT 721

Query: 706 AMLCLSSRPWLGY---IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
           A+L LSSRPWLGY   + +G F+LTPL Y  LE+  +FSS+QC EG+V + G  LR+F+I
Sbjct: 722 AVLALSSRPWLGYSDPVTKG-FMLTPLDYPALEWGWNFSSEQCTEGMVGIQGQNLRIFSI 780

Query: 763 ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
           E+L +   + ++PL YTPRRFV  P+     +IE D   L+     A K++  E   +  
Sbjct: 781 EKLTDNLLQESIPLTYTPRRFVRHPEHACFYVIEADNNILSP----ATKQKLLEDPSV-T 835

Query: 823 NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT-CLLELQDN 881
           NG+  +              L  E++GYP+  ++ W SCI V+DP +       + L+DN
Sbjct: 836 NGDATV--------------LPPEEFGYPRG-TNHWASCISVVDPVTEKKVLSTIHLEDN 880

Query: 882 EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
           E A SI  V F  +E  T L VGT K +   P R+  AG+IH+YRF E+GK LE +HKT+
Sbjct: 881 ECAVSIAVVAFASQEDETFLCVGTGKDMVVSP-RSFSAGFIHVYRFHEDGKELEFIHKTK 939

Query: 942 VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRI 997
           VE  P+AL  FQGRLLAG+G  LR+YDLG ++LLRK ++++ PN IV + T   RI
Sbjct: 940 VEEPPMALLAFQGRLLAGVGKDLRIYDLGMRQLLRKAQSEVAPNMIVGLQTQGSRI 995


>gi|389586447|dbj|GAB69176.1| splicing factor 3B subunit 3 [Plasmodium cynomolgi strain B]
          Length = 1286

 Score = 1030 bits (2662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 549/1298 (42%), Positives = 793/1298 (61%), Gaps = 102/1298 (7%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTLQ+PT I     GNFSG K  EIVV++G+VLELLR +  G++  + S ++FG IR
Sbjct: 4    LYHLTLQKPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIASKDVFGIIR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
             L  FRLTGS KDY+V+GSDSGR+VIL+++  KN F ++H ET+GKSG RRI+PG+Y+AV
Sbjct: 64   CLQTFRLTGSNKDYVVIGSDSGRLVILQFSNEKNDFVRVHCETYGKSGLRRIIPGEYIAV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGRA+MI A E+QK VY+LNRDT  +LTISSPL+AHKSHTI + + G+D GF+NPIFA
Sbjct: 124  DPKGRALMICAIERQKFVYILNRDTKEQLTISSPLDAHKSHTICHDVVGMDVGFENPIFA 183

Query: 183  AIELDYSEADQDSTGQAASEA---QKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +IE +Y   D+  T     +    +  L  +E+DLGLNHV RK + P+D+ A++L+ +PG
Sbjct: 184  SIEQNYEMYDKQVTNTNEIDGCTRKTLLCLWEMDLGLNHVIRKHTLPIDSSAHLLIPIPG 243

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
            G  GPSGV+VC +N+++YK   H DV    PRR +   E+ + IV +A HR +  FF L+
Sbjct: 244  GQQGPSGVIVCCDNYLVYKKVEHVDVYCAYPRRLETGQEKNISIVCSALHRIRKFFFILI 303

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            Q+E+GD++K+ ++H++  V E+  KYFDT+PV  ++CV+KSG LF A+EFGNH  YQF  
Sbjct: 304  QSEFGDLYKIEMDHEDGIVKEITCKYFDTVPVANAICVMKSGSLFVAAEFGNHFFYQFSG 363

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            IG D D EA  ++   +      + F+ + L NL  I+QV SL PI+DM+I +     +P
Sbjct: 364  IG-DDDNEAMCTSKHPSGRN-AIIAFRTKKLTNLFLIDQVYSLSPILDMKILDAKNANSP 421

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QI+ LCGRGPRSSLRIL+ GL++ E+A ++LPG P  +WT+KK+   ++D YI+VSF  +
Sbjct: 422  QIYALCGRGPRSSLRILQHGLSIEELADNELPGRPKFIWTIKKDNASDYDGYIIVSFEGS 481

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR-INEWRTPG 538
            TL+L IGETVEEV DS  L    ++ V+++ D++L+QVH +GIRHI  +G+ ++EW  P 
Sbjct: 482  TLILEIGETVEEVVDSLLLTNVTTIHVNILYDNTLIQVHDTGIRHI--NGKVVHEWVPPK 539

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
             + I    SN  Q+VI+LSGGELIYFE+D +  L+E+ +  ++ +  CL I  V E + R
Sbjct: 540  NKQIKAATSNSTQIVISLSGGELIYFEIDESHTLVEIFRKNLNVETLCLSIQQVEENKLR 599

Query: 599  SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
            + FLAVG  DN +R+LS++ +     LS   +   P +    ++  S   E G D    L
Sbjct: 600  ANFLAVGCLDNVVRLLSIEKEKYFNQLSTFIL---PNNSSAQDICISQMCELGNDKERKL 656

Query: 659  -FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLG 717
             FLN GL NGVL R+VVD +TG L++  S++LG +  K+  V +   +A+L L  + +L 
Sbjct: 657  IFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHLKKNSALLVLCEKTYLC 716

Query: 718  YIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLR 777
            Y+H+G+++ +PL+Y+ LEYA+SF S+QC +G V+++G++LR+F   RLGE F++  L L 
Sbjct: 717  YVHQGKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRIFRFYRLGEVFSQNILHLT 776

Query: 778  YTPRRFV------------------LQPKKKLMVIIETDQGA-----------------L 802
            +TPR+ V                   Q   +++ IIE D  A                 L
Sbjct: 777  FTPRKIVPLPFPSLFYDHDTSIEIERQKNIRMLAIIEADHNAYDENTLREIQRALKGIHL 836

Query: 803  TAEEREAAKKECFEAAG-------------MGENGNGNMDQMENGDDENKYDPLSDEQYG 849
              EE   A      + G              G + N ++D+++   +      L +   G
Sbjct: 837  EGEEHTGADGPPSHSVGSDLQRNLPNGAHKQGHSANQHVDRLDQAGNTEMESALVENASG 896

Query: 850  YP-------------------------------KAESDKWVSCIRVLDPRSANTTCLLEL 878
            +                                KA   KW SCI+++ P S  T   + L
Sbjct: 897  HQHREENGDAGEEEGEEEEEEEEELLYDRIGTFKAGPGKWGSCIKIIHPISLQTIDKISL 956

Query: 879  QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
            +  EAA S+C       E    L VGT   L     R   A  + +Y + +    L LLH
Sbjct: 957  EMEEAALSVCACEL---EALHCLIVGTTTNLSL-KNRTAPAAALRVYTY-DINYKLNLLH 1011

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
             T VE  P   C F GRLLA IG  LR+Y LGKK+LL+KCE K  P  I+SI    DRI+
Sbjct: 1012 ITPVEDQPFCFCPFNGRLLASIGNKLRIYALGKKKLLKKCEYKDIPEAIISIKVSGDRIF 1071

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
              DI+ES     Y  + N L + +DD +PRW+T +  +D  T+  ADKF +++ +R+P++
Sbjct: 1072 ASDIRESVLIFFYDSNMNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFVLRVPEE 1131

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNK---MEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
                 EE     K  W  G++    NK   +E I+ FHVG++VTSLQK  L P   E +I
Sbjct: 1132 AKQ--EEYGISNKC-WYGGEIMAGSNKNRRLEHIMSFHVGEIVTSLQKVKLSPTSSECII 1188

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDL 1175
            Y T+MG++GA + + ++++++   HLE+ +R E+PPLCGR+H+ +RS Y PV+ VIDGDL
Sbjct: 1189 YSTIMGTIGAFIPYDNKEELELTQHLEIILRTENPPLCGREHIFFRSYYHPVQHVIDGDL 1248

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            CEQF +L  D+QRK+A +L+RTP +IL+KLE+IRNKI+
Sbjct: 1249 CEQFSSLPYDVQRKVAADLERTPDDILRKLEDIRNKIL 1286


>gi|221061705|ref|XP_002262422.1| splicing factor 3b, subunit 3, 130kd [Plasmodium knowlesi strain H]
 gi|193811572|emb|CAQ42300.1| splicing factor 3b, subunit 3, 130kd, putative [Plasmodium knowlesi
            strain H]
          Length = 1276

 Score = 1028 bits (2658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/1288 (43%), Positives = 794/1288 (61%), Gaps = 92/1288 (7%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTLQ+PT I     GNFSG K  EIVV++G+VLELLR +  G++  +VS +IFG IR
Sbjct: 4    LYHLTLQKPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIVSKDIFGIIR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
             L  FRLTGS KDY+V+GSDSGR+VIL+++  KN F ++H ET+GKSG RRI+PG+Y+AV
Sbjct: 64   CLQTFRLTGSNKDYVVIGSDSGRLVILQFSNEKNDFVRVHCETYGKSGLRRIIPGEYIAV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGRA+MI A E+QK VY+LNRD   +LTISSPL+AHKSHTI + + G+D GF+NP+FA
Sbjct: 124  DPKGRALMICAIERQKFVYILNRDNKEQLTISSPLDAHKSHTICHDVVGMDVGFENPMFA 183

Query: 183  AIELDYSEADQDSTGQAASEA---QKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +IE +Y   D+  T     +A   +  L  +E+DLGLNHV RK + P+D  A++L+ +PG
Sbjct: 184  SIEQNYEMYDKQVTNTTEIDACTRKTLLCLWEMDLGLNHVIRKHTLPIDMSAHLLIPIPG 243

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
            G  GPSGV+VC +N+++YK   H DV    PRR +   E+ + IV +  HR +  FF L+
Sbjct: 244  GQQGPSGVIVCCDNYLVYKKVEHVDVYCAYPRRLETGQEKNISIVCSTVHRIRKFFFILI 303

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            Q+EYGD++K+ ++H +  V E+  KYFDT+PV  ++CV+KSG LF A+EFGNH  YQF  
Sbjct: 304  QSEYGDLYKIEMDHQDGVVKEITCKYFDTVPVANAICVMKSGSLFVAAEFGNHFFYQFSG 363

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            IG D D EA  ++   +      + F+ + L NL  I+QV SL PI+DM+I +     +P
Sbjct: 364  IG-DDDNEAMCTSKHPSGRN-AIIAFRTKKLTNLFLIDQVYSLSPILDMKILDAKNANSP 421

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QI+ LCGRGPRSSLRIL+ GL++ E+A ++LPG P  +WT+KK+   ++D YI+VSF  +
Sbjct: 422  QIYALCGRGPRSSLRILQHGLSIEELADNELPGRPKYIWTIKKDNASDYDGYIIVSFEGS 481

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR-INEWRTPG 538
            TL+L IGETVEEV D+  L    ++ V+++ D+SL+QVH +GIRHI  +G+ INEW  P 
Sbjct: 482  TLILEIGETVEEVVDTLLLTNVTTIHVNILYDNSLIQVHDTGIRHI--NGKVINEWVPPK 539

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
             + +    SN  Q+VI+LSGGELIYFE+D +  L+E+ +  ++ ++ CL I  V E + R
Sbjct: 540  NKQVKAATSNATQIVISLSGGELIYFEIDESHSLVEIFRKSLNVEILCLSIQEVEENKVR 599

Query: 599  SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPAS- 657
            + FLAVG  DN +R+LS++ +     LS   +   P +    ++  S   E G D     
Sbjct: 600  ANFLAVGCLDNVVRLLSIEKEKYFNQLSTFIL---PNNSSAQDICISEMCELGNDKERKL 656

Query: 658  LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLG 717
            LFLN GL NGVL R+VVD +TG L++  S++LG +  K+  V V    A+L L  + +L 
Sbjct: 657  LFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHVKKNPALLVLCEKTYLC 716

Query: 718  YIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLR 777
            Y+H+G+++ +PL+Y+ LEYA+SF S+QC +G V+++G++LR+F   RLGE F++  L L 
Sbjct: 717  YVHQGKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRIFRFYRLGEVFSQNILHLS 776

Query: 778  YTPRRFV------------------LQPKKKLMVIIETDQGAL---TAEEREAAKK--EC 814
            +TPR+ V                   Q   +++ IIE D  A    T  E + A K  + 
Sbjct: 777  FTPRKIVPLPFPSLFYDHDTSIEIERQKNIRMLAIIEADHNAYDENTLREIQRALKGIQL 836

Query: 815  FEAAGMGENG--------------NGNMDQ---------------------MENGD-DEN 838
                  G NG              NG  +Q                      +NG+ D N
Sbjct: 837  EGEEHTGSNGPSHSDGRDLQDNLPNGTKNQGHSKNQLLEQEENEQMENASSRQNGEVDHN 896

Query: 839  ----------KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
                      + + L  ++ G  KA   KW SCI+++ P S  T   + L+  EAA S+C
Sbjct: 897  DGEEDEEADDEEEELLYDRIGTVKAGPGKWGSCIKIIHPVSLQTIDKISLEMEEAALSVC 956

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
                   E    L VGT   L     R      + +Y + +    L LLH T VE  P  
Sbjct: 957  ACEL---EALHCLIVGTTTNLSL-KNRTATTAALRVYTY-DINYKLNLLHITPVEDQPFC 1011

Query: 949  LCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHF 1008
               F GRLLA +G  LR+Y LGKK+LL+KCE K  P  I+SI    DRI+  DI+ES   
Sbjct: 1012 FSPFNGRLLASVGNKLRIYALGKKKLLKKCEYKDIPEAIISIKVSGDRIFASDIRESVLV 1071

Query: 1009 CKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1068
              Y  + N L + +DD +PRW+T +  +D  T+  ADKF +++ +R+P++     EE   
Sbjct: 1072 FFYDANMNALRLISDDIIPRWITCSEILDHHTIMAADKFDSVFVLRVPEEAKQ--EEYGI 1129

Query: 1069 GGKIKWEQGKLNGAPNK---MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGA 1125
              K  W  G++    NK   +E I+ FHVG++VTSLQK  L P   E +IY T+MG++GA
Sbjct: 1130 SNKC-WYGGEMMAGSNKNRRLEHIMNFHVGEIVTSLQKVKLSPTSSECIIYSTIMGTIGA 1188

Query: 1126 MLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLD 1185
             + + ++++++   HLE+ +R E+PPLCGR+H+ +RS Y PV+ VIDGDLCEQF +L  D
Sbjct: 1189 FIPYDNKEELELTQHLEIILRTENPPLCGREHIFFRSYYHPVQHVIDGDLCEQFSSLPYD 1248

Query: 1186 LQRKIADELDRTPGEILKKLEEIRNKIV 1213
            +QRK+A +L+RTP +IL+KLE+IRNKI+
Sbjct: 1249 IQRKVAADLERTPDDILRKLEDIRNKIL 1276


>gi|193786710|dbj|BAG52033.1| unnamed protein product [Homo sapiens]
          Length = 897

 Score = 1023 bits (2646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/905 (55%), Positives = 665/905 (73%), Gaps = 23/905 (2%)

Query: 318  VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETE 377
            V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LYQ   +G D D E   S+ M  E
Sbjct: 2    VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDD-DEEPEFSSAMPLE 60

Query: 378  EGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILR 437
            EG    FFQPR LKNLV +++++SL PI+  ++A+L  E+ PQ++  CGRGPRSSLR+LR
Sbjct: 61   EG-DTFFFQPRPLKNLVLVDELDSLSPILFCQMADLANEDTPQLYVACGRGPRSSLRVLR 119

Query: 438  PGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGF 497
             GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VSF NATLVLSIGETVEEV+DSGF
Sbjct: 120  HGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDSGF 179

Query: 498  LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALS 557
            L TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+TPGK+TIVK   N+ QVVIAL+
Sbjct: 180  LGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALT 239

Query: 558  GGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSL 616
            GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP G +RSRFLAVG  DNT+RI+SL
Sbjct: 240  GGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISL 299

Query: 617  DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPAS------LFLNAGLQNGVLF 670
            DP DC+Q LS+Q++ + PESL  +E+    GG +  D          L+LN GLQNGVL 
Sbjct: 300  DPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQDELGERGSIGFLYLNIGLQNGVLL 355

Query: 671  RTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLS 730
            RTV+D VTG LSD+R+R+LG RP KLF V + G+ A+L +SSR WL Y ++ RF LTPLS
Sbjct: 356  RTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLS 415

Query: 731  YETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
            YETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  FN+ A PL+YTPR+FV+ P+  
Sbjct: 416  YETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESN 475

Query: 791  LMVIIETDQGALT----AEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDE 846
             ++IIETD  A T    A+ ++   +E  EAAG  E      +      +EN    L + 
Sbjct: 476  NLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELA-AEMAAAFLNEN----LPES 530

Query: 847  QYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTA 906
             +G PKA + +W S IRV++P   NT  L++L+ NEAAFS+    F +      + VG A
Sbjct: 531  IFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVA 590

Query: 907  KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRL 966
            K L   P R++  G+++ Y+ V  G+ LE LHKT VE +P A+  FQGR+L G+G +LR+
Sbjct: 591  KDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRV 649

Query: 967  YDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSV 1026
            YDLGKK+LLRKCENK   N I  I T   R+ V D+QESF + +Y+R+ENQL IFADD+ 
Sbjct: 650  YDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTY 709

Query: 1027 PRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKM 1086
            PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W++G LNGA  K 
Sbjct: 710  PRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKA 769

Query: 1087 EEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR 1146
            E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +D DFF H+EMH+R
Sbjct: 770  EVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLR 829

Query: 1147 QEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLE 1206
             EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++ELDRTP E+ KKLE
Sbjct: 830  SEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLE 889

Query: 1207 EIRNK 1211
            +IR +
Sbjct: 890  DIRTR 894


>gi|294875343|ref|XP_002767276.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
 gi|239868839|gb|EEQ99993.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
          Length = 1258

 Score = 1023 bits (2646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/1291 (43%), Positives = 791/1291 (61%), Gaps = 114/1291 (8%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            + Y++TL + + +  A+ GNFS  K  EIVVARG  LELLRP+   R++T++S   FG I
Sbjct: 3    HFYNMTLSKTSAVTCAVYGNFSAPKAQEIVVARGSTLELLRPDEQNRLQTVISVNCFGLI 62

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLA 121
            RSL  FRL G+ +DY++VGSDSGRIVILEYN +KN+FDK+HQET+GK+GCRR VPGQYLA
Sbjct: 63   RSLETFRLVGANRDYLLVGSDSGRIVILEYNTTKNIFDKVHQETYGKTGCRRTVPGQYLA 122

Query: 122  VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIF 181
            VDPKGR+ M+ A E+QK VY+LNRD  +RLTISSPLEAHKS+TIV++  G+D GFDNP F
Sbjct: 123  VDPKGRSCMVSAVERQKFVYILNRDLQSRLTISSPLEAHKSYTIVFATVGLDVGFDNPQF 182

Query: 182  AAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGG 241
            AAIE  Y     D  G+     QK LT YE+DLG+NHV+RK S+ +   A+ L+ VPGG 
Sbjct: 183  AAIECQY-----DDFGKKGPNPQKLLTIYEMDLGVNHVTRKHSDKIPFTAHDLIPVPGGT 237

Query: 242  DGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQT 301
            DGP GVL+C ENF+ Y  QGHP +   +PRR D PAE+G+++V  + H+ K  FFFL+Q+
Sbjct: 238  DGPGGVLLCCENFLSYYKQGHPVLSCAMPRRLDTPAEKGLMVVCWSRHKLKNFFFFLIQS 297

Query: 302  EYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIG 361
            EYGD++KVTL H    VSE++  YFD+IPV  S+CVLK+G+LFAASEFGNHALYQF ++G
Sbjct: 298  EYGDLYKVTLSHKEGVVSEIQCSYFDSIPVAISICVLKTGFLFAASEFGNHALYQFASLG 357

Query: 362  ADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP-- 419
               DV  +  T          V F+PR LKNL   +++ SL PI DM++ + F  +    
Sbjct: 358  ---DVTPALVTSSHPNRENAVVAFKPRTLKNLTPFDELSSLAPITDMKVMDCFSTQTQVL 414

Query: 420  -------------------QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
                               QI+ L GRGPRS+LRILR GL + E   S+LPG P+A++T+
Sbjct: 415  QADGSGMQQTVTTGMSVGCQIYALSGRGPRSALRILRHGLTLGEAGASELPGQPNALFTI 474

Query: 461  K---------KNVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIG 510
            K              E D YIVVSF + TL L +  + + EV+DSGF    P+L    + 
Sbjct: 475  KPFGASYAPVAEGEVESDRYIVVSFVDQTLTLLVTSDNIHEVTDSGFAKEQPTLFAMRMQ 534

Query: 511  DDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV--DM 568
            D S +QV P+GIRH+    R  EWR P  R +    SN  QVVIALSGGE+  FE+  D 
Sbjct: 535  DKSAIQVMPTGIRHVAAGRRTTEWRAPPGRQVTMAASNGSQVVIALSGGEIQLFELDADT 594

Query: 569  TGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQ 628
             G L EV K ++  +VA L +  +  GR RS+F+AV   D+++R+LSLD D  ++ L+ Q
Sbjct: 595  NGHLSEVAKRDIGCEVAALTVQPLSSGRTRSQFMAVAGVDSSVRVLSLDSDRPLRQLAAQ 654

Query: 629  SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRF 688
            ++ +   S+  L+         G    A+++L  GL++GVL R+VVD VTGQLSD R R 
Sbjct: 655  ALRTTASSVCMLQF--------GEGTTATIYLAIGLEDGVLVRSVVDGVTGQLSDQRQRV 706

Query: 689  LGLRPPKLFSVVV-GGRAAMLCLSSRPWLGY---------IHRGRFLLTPLS----YETL 734
            LG R   L  + V GGR AM+ +SSRP+L +            G++   PL+        
Sbjct: 707  LGPRRVTLCPITVDGGRPAMVAMSSRPFLCFQANDYSAAGASGGQYQCVPLTKIPALPRF 766

Query: 735  EYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRF----------- 783
            ++AA FS + C EG+ + +   LR+ ++ERL ETFN+  +PL YT R+F           
Sbjct: 767  DHAAPFSIENCQEGICTTSQRVLRIVSVERLNETFNQVMVPLSYTGRKFLPLPPPRLLSG 826

Query: 784  ---VLQPKKKLMV-IIETDQGALTAEE----REAAKKECFEAAGMGENGNGNMDQMENGD 835
                 Q   ++M+ ++E+D      E     R+A +K   +A   GE  + +MD      
Sbjct: 827  QMDAAQMDNRIMLAVMESDHNTYNEETKTEIRDALRKIKVDA---GEEEDADMDP----P 879

Query: 836  DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD- 894
             E++ + L     G   A   KW SCIRV+DP +A+T+  L+L  +EAA ++    F+  
Sbjct: 880  PESQVNSL----VGTYIAGQGKWGSCIRVVDPLTASTSFKLDLDVDEAATAMTVCYFYQL 935

Query: 895  KEHGTLLAVGTAKGLQ-FWPKRNIVAG-YIHIYRFVEEGKSLELLHKTQVEGIPLALCQF 952
            K++   L VGTA G+    P R+     YI  Y + +E  +L+L+H T +EG+P A+  F
Sbjct: 936  KDNRPCLVVGTATGVDPHNPSRSAHGKCYIKTYLY-DESYNLQLIHVTPLEGVPSAMYPF 994

Query: 953  QGRLLAG------IGPVLRLYDLGKKRLLRKCENKLFPNT--IVSINTYRDRIYVGDIQE 1004
            +GRLL        + PVLR+Y+LGKKRLL+KCE K  P +  I+ ++  +DRI+  D ++
Sbjct: 995  EGRLLVALRGSPTVAPVLRIYELGKKRLLKKCEYKFLPESGGIMWLDVNKDRIFAADSRD 1054

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S    ++R  +NQ+ + +DD+ PR +TAA  +D++T+   DKF NI  +R+P D  D   
Sbjct: 1055 SILVLRWRYSDNQMQVISDDTYPRCITAAAVLDYNTIVVGDKFDNIAVLRVPGDAKD--- 1111

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
                 G    +    +G   KM+ I  FHVG+ +TSLQ+ ++V GG E VIY TV+G++G
Sbjct: 1112 ----AGAWGRDNDYASGNTFKMDLIGHFHVGETITSLQRVTMVAGGAEIVIYSTVLGTIG 1167

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQ--EHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL 1182
            A+  FSS+ +  F   LEMHMR     P L GR+H+ YRS Y P+K+ +D DLCE +  L
Sbjct: 1168 ALYPFSSKREHGFLQALEMHMRNTAASPSLTGREHVMYRSFYHPIKNFVDADLCEVYYQL 1227

Query: 1183 SLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
              + QR+IA ++D+TP E++KKLE+IRN+++
Sbjct: 1228 PAEKQRQIAVDMDKTPQEVMKKLEDIRNRVL 1258


>gi|68075683|ref|XP_679761.1| splicing factor 3b, subunit 3, 130kD [Plasmodium berghei strain ANKA]
 gi|56500578|emb|CAH95367.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium berghei]
          Length = 1216

 Score = 1018 bits (2631), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/1238 (42%), Positives = 793/1238 (64%), Gaps = 52/1238 (4%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTLQ+PT I   + GNFSG K  EIVVA+G+VLELLR +  G++  + S +IFG IR
Sbjct: 4    LYHLTLQKPTAITRTVYGNFSGPKAHEIVVAKGQVLELLRADKQGKLNVITSKDIFGIIR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            SL  FRL GS KDYI +GSDSGR+VIL+Y+  KN F ++H ET+GKSG RRI+PG+Y+A+
Sbjct: 64   SLEIFRLMGSNKDYIAIGSDSGRLVILKYDDEKNDFIRVHCETYGKSGIRRIIPGEYIAI 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGRA+M+ A EKQK VY+LNRD    LTISSPLEAHKSH+I +++ G++ GF+NP+F 
Sbjct: 124  DPKGRALMLCAIEKQKFVYILNRDNKENLTISSPLEAHKSHSICHAVVGLNVGFENPMFV 183

Query: 183  AIELDYSEADQ---DSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +IE +Y   D+   ++  Q     +K L F+E+DLGLNHV +K + P+D  A++L+ +PG
Sbjct: 184  SIEQNYEALDKQVLNTNEQIMEYPKKGLCFWEMDLGLNHVIKKHTIPIDITAHLLIPLPG 243

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
            G  GPSG++VC EN+++YK   H D+    PRR ++  E+ + IV    HR KT FF L+
Sbjct: 244  GQQGPSGLIVCCENYLVYKKIDHDDIYCSYPRRLEVGEEKNISIVCWTIHRIKTFFFILI 303

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            Q+EYGD++K+ + H++  V E+  KYFDT+P+  S+CVLKSG LF A+EFGNH  YQF  
Sbjct: 304  QSEYGDLYKIEVNHEDGIVKEIICKYFDTVPIANSICVLKSGALFVAAEFGNHFFYQFSG 363

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            IG D +    +S     +     + F+ + LKNL  ++Q+ SL PI+DM+I +      P
Sbjct: 364  IGNDSNESMCTSNHPSGKNAI--IAFKTQKLKNLYLVDQIYSL-PIVDMKILDAKNSNIP 420

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QI+ LCGRGPRSSLRIL+ GL++ E+A ++LPG P  +WT+KK+ + E+D YI+VSF   
Sbjct: 421  QIYALCGRGPRSSLRILQHGLSIEELANNELPGKPRYIWTIKKDNSSEYDGYIIVSFEGN 480

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI-NEWRTPG 538
            TL+L IGETVEEV DS  L    ++ ++L+ D+S +QV+ +GIRHI  +G+I  EW  P 
Sbjct: 481  TLILEIGETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTGIRHI--NGKIVQEWVPPK 538

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
             + I    SN  Q+VI+LSGGELIYFE+D +  L E+ +  ++ ++ CL I  + + + R
Sbjct: 539  NKQINAATSNGSQIVISLSGGELIYFEIDESHTLTEIFRKNINVEILCLSIQQIQQNKLR 598

Query: 599  SRFLAVGSYDNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQASVGGEDGADHPA 656
            + FLAVG  DN +R+LS++ D   + LS   +  +S P+ +   E++  +G +   +H  
Sbjct: 599  ASFLAVGCLDNVVRLLSIEKDQYFKQLSTYILPNNSSPQDICISEMK-ELGSQ--KEHTI 655

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
             L+LN GL  GVL R+V+D + G LS+  S++LG +  K+  V V    A+L LS + +L
Sbjct: 656  -LYLNIGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPALLVLSEKTYL 714

Query: 717  GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
             Y+++G+++ +PL+Y+ LEYA+SF S+QC +G V+++GN+LR+F   RLGE F++  L L
Sbjct: 715  CYVYQGKYIYSPLNYDVLEYASSFYSEQCSDGYVAISGNSLRIFRFYRLGEVFSQNILHL 774

Query: 777  RYTPRRFV--------------LQPKK----KLMVIIETDQGALTAEEREAAKKECFEAA 818
             +TPR+ V              L+ K+    +++ +IE D  A     ++  +K   +  
Sbjct: 775  TFTPRKIVPLPFPSLFYDNDTSLEIKRIKNIQMLAVIEADHNAYDENTQQEIQKALRDIK 834

Query: 819  GMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLEL 878
              G+      D++EN ++E  YD +     G PKA   KW SCI++++P +      + L
Sbjct: 835  LEGK--GEAEDELENDEEELLYDRI-----GTPKAGLGKWGSCIKIINPINLQVIDKISL 887

Query: 879  QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
            +  EAA S+C       E    L VGT   +     RN+ +  + +Y + +    L LLH
Sbjct: 888  ELEEAALSVCACEL---EALHCLIVGTTTNMTL-KSRNVPSASLRVYTY-DINYKLNLLH 942

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
             T +E  P   C F G+++  +G  LR+Y LGKK+LL+KCE K  P  IVSI    +RI+
Sbjct: 943  ITPIEDQPYCFCPFNGKVIVSVGNKLRIYALGKKKLLKKCEYKDIPEAIVSIKV-SNRIF 1001

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
              DI+ES     Y  ++N + + +DD +PRW+T +  +D  T+  ADKF +++ +R+P++
Sbjct: 1002 ASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTIIAADKFDSVFILRVPEE 1061

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPN---KMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
                 EE     K  W  G++  +     KME I+ FH+G++VTSLQK  L P   E +I
Sbjct: 1062 AKQ--EEYGIANKC-WYGGEVINSSTKNRKMEHIMSFHIGEIVTSLQKVKLSPVSSECII 1118

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDL 1175
            Y T+MG++GA + + ++++++   HLE+ +R E   LCGR+H+ +RS Y PV+ VIDGDL
Sbjct: 1119 YSTIMGTIGAFIPYDNKEELELTQHLEIILRTEKHALCGREHIFFRSYYHPVQHVIDGDL 1178

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            CEQF +L  ++QRKI  +L++TP EIL+KLE+IRNKI+
Sbjct: 1179 CEQFSSLPFEVQRKIGSDLEKTPDEILRKLEDIRNKIL 1216


>gi|145549784|ref|XP_001460571.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428401|emb|CAK93174.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1178

 Score = 1016 bits (2627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/1217 (42%), Positives = 768/1217 (63%), Gaps = 43/1217 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            M LYSLTLQ+ TGI  AI GNFSG K  EIVV++ K +ELL+  +S G++ET+ S E+FG
Sbjct: 1    MQLYSLTLQKSTGIQKAIYGNFSGPKAQEIVVSKVKHIELLKINDSNGKLETIASQEVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+  FR  G+ +D +V+GSDSGR+V+L ++  KN+F K+HQET+GK+GCRRIVPGQY
Sbjct: 61   IIRSIHSFRFPGNNRDNLVIGSDSGRVVVLGFDGQKNMFVKVHQETYGKTGCRRIVPGQY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA MI A EK K VY+L R+   ++TISSPLEA KSHTIV+ I G+D G+DN 
Sbjct: 121  LACDPKGRAFMISAVEKHKFVYILTRENE-KITISSPLEAPKSHTIVFDIVGLDAGYDNA 179

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FAAIE DY +     +        K LT YE+D GLN V R+ S+P+   ++ L+ VP 
Sbjct: 180  QFAAIESDYGDWQDKDSAVCTGIQTKFLTIYEMDFGLNTVRRQRSDPIHISSHSLLMVPN 239

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
              DGP GV+V  E+F+ Y+   + +++   P+   +PA+RG +I S   ++QK+ F +LL
Sbjct: 240  APDGPGGVIVLCEDFLHYRGPKNQEMKVPYPKNQGMPADRGAMISSFGFYKQKSSFLYLL 299

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            Q+EYGD+F+++L+   + V  +++ YFDTIPV  S+C+++S +LFAA E GNH  Y++Q 
Sbjct: 300  QSEYGDLFELSLQFTKDEVHSIRMIYFDTIPVANSLCLMRSKHLFAACEKGNHCFYKYQR 359

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
                 ++  + S++   E+    +FF+P+ LK+L  ++++ +   I D+++A+L +E  P
Sbjct: 360  EETSTNIICTDSSMALEEQ----IFFKPQKLKHLSLLQELNNFSCISDLKVADLAKEGNP 415

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            QI+  C  G RS+LR+LR GL ++++A + L   P  +WT+K+   D    YIV+S+ N 
Sbjct: 416  QIYICCAAGNRSTLRVLRHGLEITQLANTNLQAKPLGIWTLKERYEDPVHKYIVISYINK 475

Query: 480  TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
            TLVL IGE VE+V D+G   T  ++ V  + DDS +Q+  +G RHIR++    ++   GK
Sbjct: 476  TLVLKIGEKVEQVHDTGLEGTKQTIHVGTLIDDSQIQILTNGYRHIRKNKPPTDYIIDGK 535

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMT---GQLLEVEKHEMSGDVACLDIASVPEGR 596
              ++K  SN  QV  AL+GG++ YFE+D T   G L+E+ K +M  ++  L++  + EGR
Sbjct: 536  --VIKGVSNEKQVAFALAGGDVYYFELDTTSVSGNLIEITKDQMDNEIKALELGPIEEGR 593

Query: 597  KRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPA 656
            +R +FL V   D TIR+LSL+P+ C +  ++Q++ S  ESL  +E+ +   G+       
Sbjct: 594  QRCKFLCVALSDQTIRLLSLEPESCFERGAMQALPSEAESLCMMEMASEQEGQQS--FTK 651

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
             LFL  GL NG+L RT VD ++G LSD+R+R+LG +P K   +    + AML LSSR WL
Sbjct: 652  QLFLFIGLNNGLLMRTSVDQLSGGLSDTRTRYLGTKPVKCLRITANQQQAMLALSSRSWL 711

Query: 717  GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
             Y + GR  + PLSY+ L+YA++F + +  +G+V    + LR+   ER GE FN+ +L L
Sbjct: 712  CYNNSGRIFMQPLSYDYLDYASAFLAKE-FQGIVGTNQSTLRIIMPERFGEIFNQQSLDL 770

Query: 777  RYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDD 836
             Y+PR+ +     K + IIE+D  +    +++   +E ++   +                
Sbjct: 771  TYSPRKMIFHEPSKAIFIIESDNRSYNNIQQKV--QEVYQTEEL---------------- 812

Query: 837  ENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE 896
                     EQ+   +AE  KW S IR++D     T  + +  +N+ A SIC + F    
Sbjct: 813  --------PEQWNQIQAEQYKWASLIRIVDATKLETVNVHQFYENQHACSICYIQFAGYP 864

Query: 897  HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRL 956
                + VGT K L   P R    G+IH   FV + K+L+L H T ++ IP AL  ++GRL
Sbjct: 865  E-QYICVGTVKDLVNEPSRKFSQGFIHT--FVYDNKTLKLKHSTPIDEIPYALAAWRGRL 921

Query: 957  LAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN 1016
            L G G  LR+Y++G +R+L+K E K   + I SI    DRIYV ++ +S H  +Y   + 
Sbjct: 922  LVGAGCNLRVYEMGNQRILKKAEIKNLNSFITSIMVKEDRIYVAEVADSIHLLRYNIRDQ 981

Query: 1017 QLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ 1076
                 ADD +PR++TA+  +D+ T+   DKF NI+  R+P D+ +E EE P   K+K +Q
Sbjct: 982  TFMELADDILPRYVTASTVLDYHTVIAGDKFENIFVSRVPLDIDEEQEEHPYEYKMKMDQ 1041

Query: 1077 GKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
            G +NGAP KM++I  F+VG+V+TSLQK +LV    E V+YGT MGS+ A+  F +++D+D
Sbjct: 1042 GCMNGAPFKMDQICNFYVGEVITSLQKIALVSTSSEVVVYGTSMGSIAALYPFDNKEDID 1101

Query: 1137 FFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
            FF HLEM++R EH PL GRDHM +RSAY P K +IDGDLC+QF  +  + QR +A+E DR
Sbjct: 1102 FFLHLEMYLRVEHQPLSGRDHMQFRSAYGPCKSIIDGDLCDQFGNMQYNKQRAVAEEFDR 1161

Query: 1197 TPGEILKKLEEIRNKIV 1213
            TP +I+KKLE+IRNKI+
Sbjct: 1162 TPADIIKKLEDIRNKIL 1178


>gi|124806507|ref|XP_001350742.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium falciparum
            3D7]
 gi|23496869|gb|AAN36422.1|AE014849_41 splicing factor 3b, subunit 3, 130kD, putative [Plasmodium falciparum
            3D7]
          Length = 1329

 Score = 1015 bits (2624), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 549/1343 (40%), Positives = 801/1343 (59%), Gaps = 149/1343 (11%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTLQ+PT I   + GNFSG +  EI+VA+G+VLELLR +  G++  ++S +IFG IR
Sbjct: 4    LYHLTLQKPTAITKTVYGNFSGPRFHEIIVAKGQVLELLRSDKQGKLNVIISKDIFGIIR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            S++ FRLTGS KDYIV+GSDSGR+VILEYN  KN F ++H ET+GK+G RRI+PG+Y+AV
Sbjct: 64   SISTFRLTGSNKDYIVIGSDSGRLVILEYNNEKNDFVRVHCETYGKTGIRRIIPGEYIAV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGRA+MI A EKQK VY+LNRD    LTISSPLEAHKSH+I + + G++ GF+NP+F 
Sbjct: 124  DPKGRALMICAVEKQKFVYILNRDNKENLTISSPLEAHKSHSICHDVVGLNVGFENPMFV 183

Query: 183  AIELDYSEADQ---------------------------------DSTGQAAS--EAQKNL 207
            +IE +Y   D+                                 D+     S   A+K L
Sbjct: 184  SIEQNYESLDKQINEELENENDDEDKSDEERKDNNDIINDKNVKDNKDNDFSLDYAKKVL 243

Query: 208  TFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRA 267
             F+ELDLGLNHV +K   P+D  A++L+ +PGG  GPSGVL+C ENF++YK   H D+  
Sbjct: 244  CFWELDLGLNHVIKKHILPIDITAHLLIPLPGGQQGPSGVLICCENFLVYKKVDHEDIYC 303

Query: 268  VIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFD 327
              PRR ++  ++ + I+    HR K  FF L+Q+EYGD++K+ ++H++  V E+  KYFD
Sbjct: 304  AYPRRLEIGQDKNISIICWTMHRIKKFFFILIQSEYGDLYKIEVDHEDGIVKEIVCKYFD 363

Query: 328  TIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQP 387
            T+P+  S+ VLKSG LF A+EFGNH  YQF  IG D      +S     +     + F+ 
Sbjct: 364  TVPIGNSISVLKSGSLFVAAEFGNHYFYQFSGIGDDNKQFMCTSNHPLGKNAI--IAFKT 421

Query: 388  RGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAV 447
              LKNL  ++Q+ SL PI+DM+I +      PQI+TLCGRGPRSSLRIL+ GL++ E+A 
Sbjct: 422  NKLKNLYLVDQIYSLSPILDMKIIDAKNTHTPQIYTLCGRGPRSSLRILQHGLSIEELAD 481

Query: 448  SQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVS 507
            ++LPG P  +WT+KK+   E+D YIVVSF   TL+L IGE+VEEVSD+  L+   +L ++
Sbjct: 482  NELPGKPKYIWTIKKDNLSEYDGYIVVSFEGNTLILEIGESVEEVSDTLLLNNVTTLHIN 541

Query: 508  LIGDDSLMQVHPSGIRHIREDGRI-NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV 566
            ++ D+S +QV+ +GIRHI  +G++  EW  P  + I    SN  Q+VI+LSGGELIYFE+
Sbjct: 542  ILYDNSFIQVYDTGIRHI--NGKVVQEWVAPKNKQIKAASSNSSQIVISLSGGELIYFEI 599

Query: 567  DMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILS 626
            D +  L+E+ +  ++ +V CL I  +P  R R+ FLAVG  DN +R+LS++ D   + LS
Sbjct: 600  DESHTLVEIFRKNLNVEVLCLSIQQIPPNRVRANFLAVGCLDNVVRLLSIEKDKYFKQLS 659

Query: 627  VQSV--SSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDS 684
               +  +S P+ +   E+       +       +FLN GL  GVL R+++D V G LS+ 
Sbjct: 660  THLLPNNSSPQDICISEMN---DNGNTMKERNIIFLNIGLNTGVLLRSIIDPVAGTLSNH 716

Query: 685  RSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQ 744
             S++LG +  K+  V V    A+L L  + +L Y+H+G+FL +PL+Y+ LEYA+SF S Q
Sbjct: 717  YSKYLGAKSIKICPVNVNKNPALLVLCEKTYLCYMHQGKFLYSPLNYDMLEYASSFYSPQ 776

Query: 745  CVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFV----------------LQPK 788
            C +G V+++ N+LR+F   RLGE F++  L L +TPR+ V                L+ K
Sbjct: 777  CSDGYVAISSNSLRIFRFYRLGEVFSQNILHLTFTPRKIVPLPFPSLFYDHDSSLELERK 836

Query: 789  KK--LMVIIETDQGAL---TAEEREAAKKE-----------------------------C 814
            KK  ++ IIE D  +    T  E + A K+                              
Sbjct: 837  KKIRMLAIIEADHNSYDENTQREIQKALKDIKLSDTERRKENDNENNNIYSNGDVDNIDV 896

Query: 815  FEAAGMGE--NGNGNMDQMENGDDENKYDPLSDEQY------------------------ 848
             ++A M E  N N N+   +N   +  Y+   +EQ+                        
Sbjct: 897  NDSANMNEEFNSNDNISLAQNHKKDVSYNK-EEEQFTDNNKNDTENVIETYENNASLNES 955

Query: 849  --------------GYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD 894
                          G  KA   KW SCI++++P +      + L   EAA S+C      
Sbjct: 956  NDEENEDEYYYDRIGTFKAGQGKWGSCIKIINPVNLQILDKISLDMEEAALSVCACEL-- 1013

Query: 895  KEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQG 954
             E    L VGT   L    K ++ +  + +Y +  + K L LLH T +E  P   C + G
Sbjct: 1014 -EALHCLIVGTTTNLSLKTK-SLTSASLRVYTYDIQYK-LNLLHITPIEEQPYCFCSYNG 1070

Query: 955  RLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRD 1014
            +L+A IG  LR+Y LGKK+LL+KCE K  P  IVSI    +RI+  DI+ES     Y  +
Sbjct: 1071 KLIASIGNKLRIYALGKKKLLKKCEYKDIPEAIVSIKISGNRIFACDIRESVLIFFYDPN 1130

Query: 1015 ENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIK- 1073
            +N L + +DD +PRW+T +  +D  T+  ADKF +++ +R+P+    E ++D  G   K 
Sbjct: 1131 QNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFILRVPE----EAKQDEYGITNKC 1186

Query: 1074 WEQGKLNGAPNK---MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFS 1130
            W  G++  +  K   +E ++ FH+G++VTS+QK  L P   E +IY T+MG++GA + + 
Sbjct: 1187 WYGGEIMNSSTKNRKLEHMMSFHIGEIVTSMQKVRLSPTSSECIIYSTIMGTIGAFIPYD 1246

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
            ++++++   HLE+ +R E PPLCGR+H+ +RS Y PV++V+DGDLCEQF +LS D Q+KI
Sbjct: 1247 NKEELELTQHLEIILRTEKPPLCGREHIFFRSYYHPVQNVVDGDLCEQFSSLSYDAQKKI 1306

Query: 1191 ADELDRTPGEILKKLEEIRNKIV 1213
            A++L+RTP +IL+KLE+IRNKI+
Sbjct: 1307 ANDLERTPEDILRKLEDIRNKIL 1329


>gi|145510432|ref|XP_001441149.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408388|emb|CAK73752.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1174

 Score = 1012 bits (2616), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/1216 (42%), Positives = 765/1216 (62%), Gaps = 45/1216 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M LYSLTLQ+ TGI  AI GNFSG K  EIVV++ K +ELL+   S   +T+ S E+FG 
Sbjct: 1    MQLYSLTLQKSTGIQKAIYGNFSGPKAQEIVVSKVKHIELLKINES---KTIASQEVFGI 57

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRS+  FR  G+ +D +V+GSDSGR+V+L ++  KN+F K+HQET+GK+GCRRIVPGQYL
Sbjct: 58   IRSIHSFRFPGNNRDNLVIGSDSGRVVVLGFDGLKNMFVKVHQETYGKTGCRRIVPGQYL 117

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A DPKGRA MI A EK K VY+L R+   ++TISSPLEA KSHTIV+ I G+D G+DN  
Sbjct: 118  ACDPKGRAFMISAVEKHKFVYILTRENE-KITISSPLEAPKSHTIVFDIVGLDAGYDNAQ 176

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAAIE DY +     +        K LT YE+D GLN V R+ S+P+   ++ L+ VP  
Sbjct: 177  FAAIESDYGDWQDKDSAVCTGIQTKFLTIYEMDFGLNTVRRQRSDPIHISSHALLMVPNA 236

Query: 241  GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
             DGP GV+V  E+F+ Y+   + +++   P+   +P +RG +I S   ++QK+ F +LLQ
Sbjct: 237  PDGPGGVIVLCEDFLHYRGPKNQEMKVPYPKNQGMPTDRGAMISSFGFYKQKSSFLYLLQ 296

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            +EYGD+F+++L+   + V  +++ YFDTIPV  S+C+++S +LFAA E GNH  Y++Q  
Sbjct: 297  SEYGDLFELSLQFTKDEVHSIRMIYFDTIPVANSLCLMRSKHLFAACEKGNHCFYKYQRE 356

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
              + ++  + S++   E+    +FF+P+ LK+L  ++++ +   I D+++A+L +E  PQ
Sbjct: 357  ETNTNIICTDSSMALEEQ----IFFKPQKLKHLSLLQELNNFSCISDLKVADLAKEGNPQ 412

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            I+  C  G RS+LR+LR GL ++++A + L   P  +WT+K+   D    YIV+S+ N T
Sbjct: 413  IYICCAAGNRSTLRVLRHGLEITQLANTNLQAKPLGIWTLKERYEDPVHKYIVISYINKT 472

Query: 481  LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            LVL IGE VE+V D+G   T  ++ V  + DDS +Q+  +G RHIR++    ++   GK 
Sbjct: 473  LVLKIGEKVEQVHDTGLEGTKQTIHVGTLIDDSQIQILTNGYRHIRKNKPPTDYIIDGK- 531

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMT---GQLLEVEKHEMSGDVACLDIASVPEGRK 597
             ++K  SN  QV  AL+GG++ YFE+D T   G L+E+ K +M  ++  L++  + EGR+
Sbjct: 532  -VIKGVSNEKQVAFALAGGDVYYFELDTTSFQGNLIEITKDQMDNEIKALELGPIEEGRQ 590

Query: 598  RSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPAS 657
            R +FL V   D TIR+LSL+P+ C +  ++Q++ S  ESL  +E+ +   G+        
Sbjct: 591  RCKFLCVALSDQTIRLLSLEPESCFERGAMQALPSEAESLCMMEMASEQEGQQS--FTKQ 648

Query: 658  LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLG 717
            LFL  GL NG+L RT VD ++G LSD+R+R+LG +P K   +    + AML LSSR WL 
Sbjct: 649  LFLFIGLNNGLLMRTSVDQLSGGLSDTRTRYLGTKPVKCLRINANQQQAMLALSSRSWLC 708

Query: 718  YIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLR 777
            Y + GR  + PLSY+ L+YA++F + +  +G+V    + LR+   ER GE FN+ +L L 
Sbjct: 709  YNNSGRIFMQPLSYDYLDYASAFLAKE-FQGIVGTNQSTLRIIMPERFGEIFNQQSLDLT 767

Query: 778  YTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDE 837
            Y+PR+ +     K + IIE+D  +    E++   +E ++   +                 
Sbjct: 768  YSPRKMIFHEPSKAIFIIESDNRSYNNVEQKV--QEVYQTQEI----------------- 808

Query: 838  NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEH 897
                    EQ+   +AE  KW S IR++D     T  + +  +N+ A SIC + F     
Sbjct: 809  -------PEQWNQVQAEQYKWASLIRIVDATKLETINVHQFYENQHACSICYIQFAGYPE 861

Query: 898  GTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLL 957
               + VGT K L   P R    G+IH   F+ + K+L+L H TQ++ IP AL  ++GRLL
Sbjct: 862  -QYVCVGTVKDLVNEPTRKFSQGFIHT--FIYDNKTLKLKHSTQIDEIPYALAAWRGRLL 918

Query: 958  AGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQ 1017
             G G  LR+Y++G +R+L+K E K   + I SI    DRIYV ++ +S H  +Y   +  
Sbjct: 919  VGAGCNLRVYEMGNQRILKKAEIKNLNSFITSIMVKEDRIYVAEVSDSIHLLRYNIRDQT 978

Query: 1018 LYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQG 1077
                ADD +PR++TA+  +D+ T+   DKF NI+  R+P D+ +E EE P   K+K +QG
Sbjct: 979  FMELADDILPRYVTASTVLDYHTVIAGDKFENIFVSRVPLDIDEEQEEHPYEYKMKMDQG 1038

Query: 1078 KLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDF 1137
             +NGAP KM++I  F+VG+V+TSLQK +LV    E V+YGT MGS+ A+  F +++D+DF
Sbjct: 1039 CMNGAPFKMDQICNFYVGEVITSLQKIALVSTSSEVVVYGTSMGSIAALYPFDNKEDIDF 1098

Query: 1138 FSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            F HLEM++R EH PL GRDHM +RSAY P K +IDGDLCEQF  +  + QR +A+E DRT
Sbjct: 1099 FLHLEMYLRVEHQPLSGRDHMQFRSAYGPCKSIIDGDLCEQFGNMQYNKQRTVAEEFDRT 1158

Query: 1198 PGEILKKLEEIRNKIV 1213
            P +I+KKLE+IRNKI+
Sbjct: 1159 PADIIKKLEDIRNKIL 1174


>gi|391867503|gb|EIT76749.1| splicing factor 3b, subunit 3 [Aspergillus oryzae 3.042]
          Length = 1034

 Score = 1012 bits (2616), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/1059 (48%), Positives = 703/1059 (66%), Gaps = 42/1059 (3%)

Query: 169  ICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVD 228
            +  +D G++NPIFAA+E+DYSE+DQD TGQA  EA+K L +YELDLGLNHV RKW++PVD
Sbjct: 1    MSALDVGYENPIFAALEVDYSESDQDPTGQAYEEAEKLLVYYELDLGLNHVVRKWADPVD 60

Query: 229  NGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSA 286
              ++ML  VPGG DGPSGVLVCAE+ V Y++      R  IPRR+      ER   I + 
Sbjct: 61   RTSSMLFQVPGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGPTENPERKRFITAG 120

Query: 287  ATHRQKTLFFFLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLK 339
              H+ +  FFFLLQTE GD+FK+ +   E DN      V  LKIKYFDT+PV +S+ +LK
Sbjct: 121  VMHKMRGAFFFLLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILK 180

Query: 340  SGYLFAASEFGNHALYQFQAIGAD-PDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIE 397
            SG+L+ ASE GNH  YQF+ +G D  ++E SS     +     +P++F+PR  +NL  +E
Sbjct: 181  SGFLYVASEAGNHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVE 240

Query: 398  QVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAV 457
             + SL P++D ++ANL EE+APQI+T+ G G RS+ R L+ GL VSE+  S+LP VPSAV
Sbjct: 241  TINSLNPLIDSKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAV 300

Query: 458  WTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQV 517
            WT K    DEFDAYI++SF N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+Q+
Sbjct: 301  WTTKLTRADEFDAYIILSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQI 360

Query: 518  HPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-E 576
            HP GIRHI  D R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E
Sbjct: 361  HPRGIRHIMADRRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDE 420

Query: 577  KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPES 636
            + +MSG V CL +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ++++ P +
Sbjct: 421  RRQMSGTVTCLSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTAAPSA 480

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            L  + +  S  G        +L+L+ GL +GV  RTV+D VTG+LSD+R+RFLG +P KL
Sbjct: 481  LNIMSMSDSSSGG------TTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKL 534

Query: 697  FSVVVGGRAAMLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
            F V V G+ A+L LSSRPWLGY  I    F+LTPL Y  LE+  +FSS+QC+EG+V + G
Sbjct: 535  FQVSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQG 594

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
              LR+F+IE+L     + ++ L YTPRRF+  P++ L  +IE+D   L+   R    ++ 
Sbjct: 595  QNLRIFSIEKLDNNMLQQSISLAYTPRRFLKHPEQPLFYVIESDNNVLSPSTRAKLLEDS 654

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                G                DE    P   E++GYP+  S  W SCI+V+DP  A    
Sbjct: 655  KARTG----------------DETVLPP---EEFGYPRG-SGHWASCIQVVDPVHAKAVV 694

Query: 875  -LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKS 933
              +EL++NEAA S+  V F  ++  T L VGTAK +   P  +   GYIHIYRF E+G+ 
Sbjct: 695  STIELEENEAAVSVAAVPFTSQDDETFLVVGTAKDMNVNPPSS-AGGYIHIYRFQEDGRE 753

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTY 993
            LE +HKT+VE  PLAL  FQGRL+AGIGP+LR+YDLG K+LLRKC  ++ P TIV + T 
Sbjct: 754  LEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIYDLGMKQLLRKCNAQVVPKTIVGLQTQ 813

Query: 994  RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
              RI V D++ES  +  Y+  EN L  F DDSV RW T+   +D++T AG DKFGNI+ +
Sbjct: 814  GSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNIWML 873

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES 1113
            R P+ +S++ +ED +G  +  E+G L+G PN++E ++  +  D+ T+L K  LV GG + 
Sbjct: 874  RCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLHKTQLVAGGRDI 933

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDG 1173
            +++    G++G ++ F SR+DVDFF +LEM +  ++PPL GRDH+ YRS Y PVK VIDG
Sbjct: 934  LVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQNPPLAGRDHLIYRSYYAPVKGVIDG 993

Query: 1174 DLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            DLCE +  L  D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 994  DLCETYFLLPNDTKMMIAAELDRSVREIERKISDMRTRV 1032


>gi|19115326|ref|NP_594414.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
            pombe 972h-]
 gi|73919127|sp|Q9UTT2.1|RSE1_SCHPO RecName: Full=Pre-mRNA-splicing factor prp12; AltName:
            Full=Pre-mRNA-processing protein 12; AltName:
            Full=Spliceosome-associated protein 130
 gi|6451681|dbj|BAA86918.1| Prp12p/SAP130 [Schizosaccharomyces pombe]
 gi|7981404|emb|CAB92100.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
            pombe]
          Length = 1206

 Score = 1004 bits (2597), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/1234 (43%), Positives = 772/1234 (62%), Gaps = 63/1234 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
            ++LYSLT+Q    + ++   + SG K  EIV+A    L + + + + GR+  +++   FG
Sbjct: 7    LFLYSLTIQNSNYVQSSCAASLSGKKAQEIVIATESRLLIYKVDATDGRMNCILNQNCFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR++A  RLTG ++DY+VV SDSGRI ILEYN  KN    I+QETFGKSG RR+VPG+Y
Sbjct: 67   IIRNVAPLRLTGFKRDYLVVTSDSGRITILEYNVEKNKLVPIYQETFGKSGIRRVVPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+D KGRA MI + EK KLVYVLNRD+ A LTISSPLEAHK++ I + + G+D G+ NP
Sbjct: 127  LAIDAKGRAAMIASVEKNKLVYVLNRDSEANLTISSPLEAHKANNICFHLIGLDTGYANP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E+DYSE D DST +A + ++K L++YELDLGLNHV ++WS+ VD  + ML+ VPG
Sbjct: 187  IFAALEVDYSEIDHDSTREAFTSSEKVLSYYELDLGLNHVVKRWSKVVDRNSYMLIPVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAER---------------GVLIV 284
            G DGPSG LV +  ++ Y++      +  I RR    A                 G LIV
Sbjct: 247  GNDGPSGTLVISNGWISYRHLQKAFHQIPILRRQAASANAISTPWNQVNSNSANDGPLIV 306

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIPVTASMCVLKSGYL 343
            SA  H+ K  FF+LLQT  GD+ K+T+EHD + +V EL++KYFDT+P+   + +LK+G+L
Sbjct: 307  SAVLHKMKGSFFYLLQTGDGDLLKLTIEHDGQGNVVELRLKYFDTVPLAVQLNILKTGFL 366

Query: 344  FAASEFGNHALYQFQAIGADPD-VEASSSTLM--ETEEGFQPVFFQPRGLKNLVRIEQVE 400
            F A+EFGNH LYQF+ +G D D +E +S      + E G + V F  RGL+NL  +E++ 
Sbjct: 367  FVATEFGNHQLYQFENLGIDDDELEITSLDFQAQDNEVGTKNVHFGVRGLQNLSLVEEIP 426

Query: 401  SLMPIMDMRIANLFEE-EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
            SL  + D  +       EA Q++T+CGRG  SSLR LR GL  +E+  S+LPG P A+WT
Sbjct: 427  SLYSLTDTLLMKAPSSGEANQLYTVCGRGSNSSLRQLRRGLETTEIVASELPGAPIAIWT 486

Query: 460  VKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP 519
            +K N  D +D+YI++SF N TLVLSIGETVEE+SDSGFL +  +L    +G DSL+Q+HP
Sbjct: 487  LKLNQTDVYDSYIILSFTNGTLVLSIGETVEEISDSGFLSSVSTLNARQMGRDSLVQIHP 546

Query: 520  SGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD---MTGQLLEV- 575
             GIR+IR + + +EW+ P    +V+   N +Q+V+ALS GEL+YFE+      GQL E  
Sbjct: 547  KGIRYIRANKQTSEWKLPQDVYVVQSAINDMQIVVALSNGELVYFEMSDDVEGGQLNEYQ 606

Query: 576  EKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPE 635
            E+  ++ +V  L +  V EG +RS F+ +   D T+R+LSLD    ++ LSVQ++SSP  
Sbjct: 607  ERKTLTANVTSLALGPVQEGSRRSNFMCLACDDATVRVLSLDLYTTLENLSVQALSSPAN 666

Query: 636  SLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPK 695
            SL  + +  +V G       ++L+L+ GL NGV  RTV+D+ +GQL D+R+RFLG R  K
Sbjct: 667  SLCIIPM--NVNG------VSTLYLHIGLMNGVYLRTVIDVTSGQLLDTRTRFLGPRAVK 718

Query: 696  LFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGN 755
            ++ + +  +  +L +SSR +L Y ++    L+P++Y  +++A+SF+S+QC EG+V++  N
Sbjct: 719  IYPITMKNQNTVLAVSSRTFLAYSYQQNLQLSPIAYSAIDHASSFASEQCPEGIVAIQKN 778

Query: 756  ALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECF 815
             L++FT++ L +       PL  TPR+ V  P   ++ I+++++             + F
Sbjct: 779  TLKIFTVDSLQDDLKSDIYPLICTPRKIVKHPNFPVLYILQSERNF-----------DSF 827

Query: 816  EAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL 875
            + A             ENGD  + Y      ++      S  WVS I V D  S      
Sbjct: 828  KYA------------QENGDVGSSYTKEKQNEH-----TSKSWVSFISVFDMISKKIIHE 870

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
              L DNEAAFS+    F +++   L+A G+A  +     R    G   +YRF +EGK LE
Sbjct: 871  SPLGDNEAAFSMTAAFFKNRDEFFLVA-GSATNMDL-ECRTCSHGNFRVYRFHDEGKKLE 928

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
            L+  T+++GIP+AL  FQGR+LAG+G  LR+YDLG K++LRK E    P  I  I     
Sbjct: 929  LISHTEIDGIPMALTPFQGRMLAGVGRFLRIYDLGNKKMLRKGELSAVPLFITHITVQAS 988

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            RI V D Q S  F  Y+ ++N L  FADD++ RW T    +D+DT+AG DKFGNI+ +R 
Sbjct: 989  RIVVADSQYSVRFVVYKPEDNHLLTFADDTIHRWTTTNVLVDYDTLAGGDKFGNIWLLRC 1048

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
            P+ VS   +E+ +  K+  E+  LN  P+K++ +  F   D+ TSLQK  LV G  E ++
Sbjct: 1049 PEHVSKLADEENSESKLIHEKPFLNSTPHKLDLMAHFFTNDIPTSLQKVQLVEGAREVLL 1108

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDL 1175
            +  ++G++G    F +++DV FF  LE  +R+E PPL GRDH+AYRS Y PVK VIDGDL
Sbjct: 1109 WTGLLGTVGVFTPFINQEDVRFFQQLEFLLRKECPPLAGRDHLAYRSYYAPVKCVIDGDL 1168

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            CE + +L   +Q  IA+ELDRT  E+ KK+E+ R
Sbjct: 1169 CEMYYSLPHPVQEMIANELDRTIAEVSKKIEDFR 1202


>gi|399216895|emb|CCF73582.1| unnamed protein product [Babesia microti strain RI]
          Length = 1232

 Score =  991 bits (2563), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/1247 (42%), Positives = 760/1247 (60%), Gaps = 54/1247 (4%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTL++PT ++ A+ GNFS +K  EI +ARG  LELL+ ++ G++  + STE++G IR
Sbjct: 4    LYHLTLKKPTAVVTAVVGNFSNSKKQEIALARGHTLELLQADDQGKLNCVYSTEVYGIIR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGC-------RRIV 115
             +A FRLTG+ +DY+VV SDSGRIVILE+N +KN FD++H ET+GKSG        RRIV
Sbjct: 64   CIAPFRLTGASRDYLVVTSDSGRIVILEFNTAKNNFDRVHCETYGKSGNNGYNLGNRRIV 123

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
            PG +L VDPKGRA+M+ A E+QK VY+LNRD  + LTISSPLEAHKSH+I + + GID G
Sbjct: 124  PGHFLGVDPKGRALMLAALERQKFVYILNRDNKSNLTISSPLEAHKSHSICHYLTGIDVG 183

Query: 176  FDNPIFAAIELDYSEADQD-STGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANML 234
            FDNPIF  IE +Y+  + D S+     E++K L+F+E+DLGLNHV++K S   D  A+ML
Sbjct: 184  FDNPIFVTIEQNYATVNGDLSSSSVGDESKKYLSFWEMDLGLNHVTKKISMQTDATAHML 243

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            V + GG DGP GVLVC EN++IY    HP++    PRR +   + G+LI +   H+    
Sbjct: 244  VPICGGTDGPGGVLVCCENYLIYTKPDHPELCCAYPRRLECSQDTGILINAWVVHKMVDF 303

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
            FF LLQTEYGD+ KV +  +++ V E+  +YFDT+P+  S+CVLK+GYLF  SEFGNH  
Sbjct: 304  FFILLQTEYGDLLKVEIVSNDQTVKEIVCRYFDTVPIANSLCVLKTGYLFVGSEFGNHCF 363

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
            YQF ++G D   E ++ T +  E G   V F PR  KNL+ ++++ SL P++DM+IA+  
Sbjct: 364  YQFISLGND---ETTACTSLHPEGGNAIVAFNPRSPKNLLLVDELTSLSPVVDMKIADAR 420

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
              +  +I+  CGRG RS+ +ILRPG++V E+A ++LPG P  V+++K    D+   YI+V
Sbjct: 421  GLDTSEIYLACGRGSRSTFQILRPGISVEELANNELPGYPRYVFSLKDKNADDCVGYIIV 480

Query: 475  SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEW 534
             F   TLVLS+G+ VEEVS+S F   T +L   L+ DDS +Q+H  GIRHI  D  ++EW
Sbjct: 481  VFEGNTLVLSVGDAVEEVSNSFFNTETTTLCAMLMYDDSFIQIHEGGIRHII-DNHVSEW 539

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPE 594
            + P  + I    +N  Q++IALSGGE+IYFE+D +  L+E+ K     D+ C+ I +VP 
Sbjct: 540  KPPTSKRIKCCSANTRQILIALSGGEVIYFEIDESHALVEIFKRNFGVDITCMAIQAVPT 599

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQASVGGEDGA 652
             R  S F A+   DN ++++SL+ +  ++ LS Q +  ++  ES+   ++ + V      
Sbjct: 600  DRVYSSFGAISGLDNVVKLISLEKEKGLKQLSTQLLPNNATAESVCIAQIDSLVRDAGHM 659

Query: 653  DHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSS 712
               +SLFL  GL  GV+ R+ +D +TG LSD  SRFLG R  +   V VG     + +S 
Sbjct: 660  RRNSSLFLVVGLNTGVMIRSNIDAITGALSDQHSRFLGARAVRFSLVKVGDGMGFMAMSD 719

Query: 713  RPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNET 772
            + WL Y H+G+   + ++Y+ +E+ ASF S  C +G V+++GN+LR++    LG+ F+++
Sbjct: 720  KSWLCYAHQGKLFTSYINYDMVEHVASFCSSHCSDGFVAISGNSLRIYRCLNLGQEFSQS 779

Query: 773  ALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC----FEAAGMGENGNGNM 828
              PL YTPR+  + P    +    T+ G +T      A  EC    ++     E   G  
Sbjct: 780  VAPLTYTPRKISILPSLSPITDNGTETG-VTKNRHMLAIVECDHNTYDELTRTEIKKGLE 838

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
            + M  G+         D + G  KA   KW SC+R++DP + +T   L L  +EAA S C
Sbjct: 839  NIMPEGEQA------EDVELGLYKAGEGKWGSCVRIIDPTTLSTAAKLLLDTDEAAISCC 892

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLEL--LHKTQVEGIP 946
                 D E    LAVGT  G   W   N  +   HI R    G + E+  LH T+V GIP
Sbjct: 893  AC---DLEGYRCLAVGTVTG---WNLANSNSNSCHI-RMYAYGPNFEITFLHSTKVTGIP 945

Query: 947  LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK-----------LFPNTI-------- 987
             AL  ++GRLLAG+GP + LY LGK++LL+K E +             P TI        
Sbjct: 946  RALLAYEGRLLAGVGPDVILYALGKRQLLKKAEYRGGVIDIQGYGVATPRTIGNGGLFGV 1005

Query: 988  VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKF 1047
            + +    +RI+VGDI+ES    K+     +L +  DD  PRW+T A  +D  T+A  DKF
Sbjct: 1006 MWLGASGNRIFVGDIRESITVLKFDEQMAKLSLICDDIRPRWITGATVLDHHTVALVDKF 1065

Query: 1048 GNIYFVRLPQDVS-DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL 1106
                  R+P + S   +      G ++     + G  NK E+  QFH+GD+ T + K +L
Sbjct: 1066 DTFAVCRVPSEASASNLSSALNSGSLEAVMPTILGVGNKFEQEAQFHLGDLSTCIDKVTL 1125

Query: 1107 VPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFP 1166
              G  E+V+Y T++GS+GA++ F S D++D   HLE+ M  E+PPL GR+H  YRS Y P
Sbjct: 1126 CSGCTEAVVYATILGSIGALIPFISSDELDTLQHLELLMANENPPLSGREHSIYRSYYGP 1185

Query: 1167 VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            V+ VIDGDLCE+F +L    Q +IA ++D+T  EI+KKL +IR++++
Sbjct: 1186 VQHVIDGDLCEEFESLDSITQSRIAAKIDKTVTEIIKKLRDIRSRLI 1232


>gi|429329284|gb|AFZ81043.1| CPSF A subunit region domain-containing protein [Babesia equi]
          Length = 1175

 Score =  981 bits (2537), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/1229 (42%), Positives = 762/1229 (62%), Gaps = 75/1229 (6%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTL++PTGI  A+ G+FS  K  EIVVAR  +LELL P+++G+++++   ++FG +R
Sbjct: 4    LYHLTLKRPTGITQAVQGSFSAPKAQEIVVARSHILELLSPDSNGKLQSICVCDVFGIVR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            +++ F LTG+Q+DY+VVGSDSGR+V+LE+      F +IH ETFGK+G RRIVPGQYLAV
Sbjct: 64   TMSTFCLTGTQRDYLVVGSDSGRLVVLEFCAVSRSFKRIHCETFGKTGIRRIVPGQYLAV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGRAV+IGA E+QK VY+LNRD  A LTISSPLEAHKSH+I + + G+D GF+NP+FA
Sbjct: 124  DPKGRAVIIGAVERQKFVYILNRDAKANLTISSPLEAHKSHSICFDLVGLDVGFENPVFA 183

Query: 183  AIELDYSEADQ---DSTGQAASEA-QKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            +IE  Y   D    D   +   +A +K ++F+ELDLGLNHV +K + P+D  A++L+ VP
Sbjct: 184  SIEQSYEAVDALQIDLDEELTDDALRKGVSFWELDLGLNHVVKKVTLPIDLSAHLLIPVP 243

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
            GG      V+VC ENF++YKN  H +V    PRR ++P E+ ++IV+ A HR K  FF L
Sbjct: 244  GGDGPGG-VVVCCENFLVYKNVEHAEVACAYPRRLEMPQEKSLIIVAYAVHRMKDFFFIL 302

Query: 299  LQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            +Q+E+GD++KV L ++   V E+  +YFDT+PV+ S+C+L+SGYLF ASEFGNH LYQF 
Sbjct: 303  IQSEFGDVYKVELTYEEGVVKEIVCRYFDTVPVSVSLCILRSGYLFVASEFGNHHLYQFT 362

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
             +G D      +S           + F+PR L+NL  ++++ SL  I DM++A++     
Sbjct: 363  GLGTDERDPLCTSLHPHGRSAI--IAFKPRALQNLQLVDELSSLSAITDMKVADIQGLGQ 420

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNN 478
             QIF  CGRG RSSLR+LR G+A+  +A S+LPG P +VWTV+ +    +D +I+V F  
Sbjct: 421  HQIFLGCGRGSRSSLRVLRYGIAIEGLASSELPGRPKSVWTVRSSFESAYDGFIIVGFEG 480

Query: 479  ATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPG 538
             TLVLS+GE VEEV+DS FL +  +L V+L+GD S +QVH +GIRH+  D R+ EWR P 
Sbjct: 481  NTLVLSVGEAVEEVTDSCFLTSITTLHVALMGDGSFIQVHDAGIRHVY-DQRVKEWRAPS 539

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
             + +    SN  QV++ LSGG++IYFE+D +G L+E  K  +S +++CLD+   P+GR  
Sbjct: 540  SKRVKVAASNDRQVILGLSGGDVIYFEIDDSGNLVEYAKKSLSVEISCLDLQPTPKGRIL 599

Query: 599  SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVS--SPPESLLFLEVQASVGGEDGADHPA 656
            + F+A+G+ DN++R+L+LD    ++++S Q +S  S PES+   E   +VG        +
Sbjct: 600  ANFMAIGTLDNSVRVLTLDKS--LKVVSTQILSNNSTPESVCISEF--AVGDS------S 649

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
             ++L+ GL  GV+ R+ VD ++G LSD  SRFLG R  K   V +G   A++ LS +PWL
Sbjct: 650  LVYLHVGLNTGVMLRSTVDPISGALSDQESRFLGGRAVKFRRVSLGSSFAIVALSDKPWL 709

Query: 717  GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
             Y HRG  L++P++  TLE A S  S  C +G V+V+GN LR+F    LGETF E+ LPL
Sbjct: 710  IYTHRGILLVSPINVGTLESADSLISPICPDGFVAVSGNTLRIFRCTSLGETFAESQLPL 769

Query: 777  RYTPRRFVLQPKKK--------LMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
             YTPR+ VL P +         ++ I+E+D      ++    K      AG+        
Sbjct: 770  TYTPRKLVLMPSEAPSVGSLNYMLAIVESDHARYNEDQSLEIKNV---HAGI-------- 818

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
                    E   D      Y   KAE  KW SC+R+++P +  T   L  + +EAA    
Sbjct: 819  --------ELPSDYCESLDYTDFKAEPGKWGSCLRIVNPLTLETVAKLLFETDEAAMCAQ 870

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             V     +    L VGTA G+      + V+GY+ +Y +      + LLH T + G+P A
Sbjct: 871  VVVLDGIQ---CLVVGTAIGMNLKGDPDSVSGYLRVYAY-GANYEIRLLHATPITGVPRA 926

Query: 949  LCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNT-IVSINTYRDRIYVGDIQESFH 1007
            L  ++G+L+  +G  LRLY LGK++LL K E++   +   + I+    RI+ GDI+E F 
Sbjct: 927  LAGYEGKLICALGSRLRLYALGKRQLLLKAEHRTCTDHGFIWISVCGSRIFAGDIREGFQ 986

Query: 1008 FCK---YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
              +   Y  D  +       + PRWL+    +D+ T+ G DKF +++  R+PQ       
Sbjct: 987  LLRLRFYAEDAAEFEWIGHSTGPRWLSCCEQLDYHTVIGGDKFDSLFIARVPQ------- 1039

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
            E+ T                + E   QFH+GD+ T++ K S        VIY T++GS+G
Sbjct: 1040 EEFTKA-------------TQFENHAQFHLGDLPTAISKVSFNNMSQPIVIYSTILGSIG 1086

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
            A + ++++D++D   HLEM M  EHPPLCGR+H  +RS Y+PV++++DGDLCEQ  TL  
Sbjct: 1087 AFIPYANKDELDLMQHLEMIMANEHPPLCGREHAFFRSYYYPVQNIVDGDLCEQVKTLPE 1146

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKIV 1213
             +QRKIA +LD     +L+K++++RN+I+
Sbjct: 1147 AVQRKIATQLDTNVHTLLRKVDDVRNRIL 1175


>gi|308505958|ref|XP_003115162.1| CRE-TEG-4 protein [Caenorhabditis remanei]
 gi|308259344|gb|EFP03297.1| CRE-TEG-4 protein [Caenorhabditis remanei]
          Length = 1013

 Score =  977 bits (2525), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/1007 (49%), Positives = 667/1007 (66%), Gaps = 39/1007 (3%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGT-KTPEIVVARGKVLELLRPEN-SGRIETLVSTEIF 58
           M+LY+LTLQ  T I  AI GNFSGT K+ EIV+ RG  LELL  +  +G+I+ +   +IF
Sbjct: 1   MHLYNLTLQGQTAINQAIQGNFSGTPKSQEIVIGRGSALELLTLDTVTGKIKVMCHQDIF 60

Query: 59  GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
           G +RSL  FRLT   +D+I VGSDSGRIVIL+YN  K  F+++HQETFGK+GCRRIVPG 
Sbjct: 61  GIVRSLLAFRLTAGTRDFIAVGSDSGRIVILQYNAEKTCFERLHQETFGKTGCRRIVPGH 120

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
           YLA DP+GRA+MIGA E+QKLVY++NRD+ A LTISSPLEAHK HT+ Y++ G+D GF+N
Sbjct: 121 YLAGDPRGRALMIGAVERQKLVYIMNRDSEAHLTISSPLEAHKHHTLCYAMVGVDVGFEN 180

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
           P FA +E DY ++D D TG+AA   Q+ LTFYELDLGLNHV RK++EP+++  N+L+ VP
Sbjct: 181 PTFACLEFDYEDSDNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLNDPGNLLIAVP 240

Query: 239 GGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLF 295
           GG DGPSGV+VC EN+++YKN G  PD+R  IPRR +    A+R +LI++ ATH+ + +F
Sbjct: 241 GGNDGPSGVIVCCENYLVYKNLGDQPDIRCPIPRRRNELDDADRTMLIIATATHKTRNMF 300

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           FFL+Q E GDIFKVTLE D + V+E+K+KYFDT+P   +MC+LK+G+LF A+EFGNH LY
Sbjct: 301 FFLVQAENGDIFKVTLETDEDLVTEMKLKYFDTVPPANAMCILKAGFLFIAAEFGNHELY 360

Query: 356 QFQAIGADPDVEASSSTLMETEEGF---QPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
           Q  ++G   D E SS+       GF      FF+P  L++L+ I+ ++SL P+ D  I +
Sbjct: 361 QIASLGEGGDDEFSSAM------GFGENDAAFFEPHELRSLIPIDSMDSLSPLTDAVIGD 414

Query: 413 LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
           +  E+A Q++TL GRG RS +++LR GL +SEMAVS LPG P+AVWTVKKN+ D++D+YI
Sbjct: 415 IAREDAAQLYTLIGRGSRSHMKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYI 474

Query: 473 VVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQV-----HPSGIRHIRE 527
           VVSF NATL L+IG+TVEE SDSGFL TTP++  S+IGDDSL+QV     +  GIRHIR 
Sbjct: 475 VVSFVNATLALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQVIRNQIYSEGIRHIRA 534

Query: 528 DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVAC 586
           D RINEW+ P +R IVK   NR QV +ALSGGEL+YFE+D+ G L E  E+   + D+AC
Sbjct: 535 DKRINEWKVPPRRQIVKCAVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIAC 594

Query: 587 LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
           +  + + EG   SRFLA+G+ DN +RI+SLDP+D +  LS Q++  PPES+L ++     
Sbjct: 595 MTFSEISEGELNSRFLALGTVDNAVRIISLDPNDMLMPLSTQNLPCPPESILLIDTP--- 651

Query: 647 GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
             EDG    A++ LN GLQNG LFR  VD VTG + D+R+R+LG RP KLF V   GR+A
Sbjct: 652 -NEDGKG-VAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQCQGRSA 709

Query: 707 MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
           +LC SSR WL Y  + RF LTPLSY  LEYAASF S+QC EG+V+++ + LR+   E+LG
Sbjct: 710 ILCTSSRSWLLYHFQRRFHLTPLSYANLEYAASFCSNQCAEGIVAISASTLRIIAAEKLG 769

Query: 767 ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC---FEAAGMGEN 823
             FN  +   + TPRR  + P    +V+IETD  A T   +   + +     EA    EN
Sbjct: 770 VAFNVQSFEHKLTPRRVAVHPTMPCLVVIETDHAAYTEVTKGLKRNQMALDVEAMASDEN 829

Query: 824 GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEA 883
                 ++     E + D   +  YG P+A   KW S I ++   +       EL  NE 
Sbjct: 830 EAQLAREIATNLREKQLD---ERVYGAPRAGYGKWASAISLVSATTGQKFTHFELPQNEN 886

Query: 884 AFSICTVNFHDKEHGTLLAVGTAKGLQFW--------PKRNIVAGYIHIYRFVEEGKSLE 935
           A  +  V F       ++ VG                P    V G ++ +     G   +
Sbjct: 887 AKCLALVQFSKHPDAVMVLVGCGVNELLNTQEVNPEDPNYRQVRGCVYTFHLSPSGDRFD 946

Query: 936 LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL 982
            LH+T+      A+  F+G  L G G  LR+YD+G+K+LL KCENK+
Sbjct: 947 FLHRTETPLPVGAIHDFRGMALVGFGRFLRMYDIGQKKLLAKCENKV 993


>gi|341886293|gb|EGT42228.1| CBN-TEG-4 protein [Caenorhabditis brenneri]
          Length = 1006

 Score =  972 bits (2513), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/997 (49%), Positives = 660/997 (66%), Gaps = 26/997 (2%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGT-KTPEIVVARGKVLELLRPENS-GRIETLVSTEIF 58
           M+LY+LTLQ  T I  A+ GNFSG  K  EIVV RG  LELL  +   G+I+ +   +IF
Sbjct: 1   MHLYNLTLQGQTAINQAVQGNFSGVPKAQEIVVGRGSALELLTLDTLTGKIKVMCHQDIF 60

Query: 59  GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
           G +RSL  FRLT   +D+I VGSDSGRIVIL+YN  K  F+++HQETFGK+GCRRIVPG 
Sbjct: 61  GIVRSLLAFRLTAGTRDFIAVGSDSGRIVILQYNADKTCFERLHQETFGKTGCRRIVPGH 120

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
           YLA DP+GRA+MIGA E+QKLVY++NRD  A LTISSPLEAHK HT+ Y++ G+D GF+N
Sbjct: 121 YLAGDPRGRALMIGAVERQKLVYIMNRDAEAHLTISSPLEAHKQHTLCYAMVGVDVGFEN 180

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
           P FA +E DY +AD D TG+AA   Q+ LTFYELDLGLNHV RK++EP+ +  N+L+ VP
Sbjct: 181 PTFACLEFDYEDADNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLTDPGNLLIAVP 240

Query: 239 GGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLF 295
           GG DGPSGV+VC EN+++YKN G  PD+R  IPRR +    A+R +LI++ ATH+ K +F
Sbjct: 241 GGNDGPSGVIVCCENYLVYKNLGDQPDIRCPIPRRRNELDDADRTMLIIATATHKTKNMF 300

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           FFL+Q E GD+FKVTLE D + V+E+K+KYFDT+P   +MC+LKSG+LF A+EFGNH LY
Sbjct: 301 FFLVQAENGDVFKVTLETDEDLVTEMKLKYFDTVPPANAMCILKSGFLFVAAEFGNHELY 360

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
           Q  ++G   D E SS+      +     FF+P  L++L+ I+ ++SL P+ D  I ++  
Sbjct: 361 QIASLGEGGDDEFSSAMGFGENDA---AFFEPHELRSLIPIDSMDSLSPLTDAVIGDVAR 417

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
           E+A Q++TL GRG RS+L++LR GL +SEMAVS LPG P+AVWTVKKN+ D++D+YIVVS
Sbjct: 418 EDAAQLYTLVGRGARSNLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVVS 477

Query: 476 FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
           F NATL L+IG+TVEE SDSGFL TTP++  S+IGDDSL+Q++  GIRHIR D RINEW+
Sbjct: 478 FVNATLALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYAEGIRHIRADKRINEWK 537

Query: 536 TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
            P +R IVK   NR QV +ALSGGEL+YFE+D+ G L E  E+   + D+AC+  + + E
Sbjct: 538 APPRRQIVKCCVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIACMTFSEISE 597

Query: 595 GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
           G   SRFLA+G+ DN +RI+SLDP+D +  LS Q++  PPES+L ++        D    
Sbjct: 598 GELNSRFLALGTVDNAVRIISLDPNDMLMPLSTQNLPCPPESILLIDTP-----NDDGKG 652

Query: 655 PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
            A++ LN GLQNG LFR  VD VTG + D+R+R+LG RP KLF V V GR+A+LC SSR 
Sbjct: 653 VAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQVQGRSAILCTSSRS 712

Query: 715 WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
           WL Y  + RF LTPLSY  LEYAASF S+QC EG+V+++ + LR+   E+LG  FN  + 
Sbjct: 713 WLLYHFQRRFHLTPLSYVNLEYAASFCSNQCAEGIVAISSSTLRIIAAEKLGVAFNVQSF 772

Query: 775 PLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC---FEAAGMGENGNGNMDQM 831
             + TPRR  + P    +V IET+  A T   +   + +     EA    E       ++
Sbjct: 773 EQKMTPRRIAVHPTLPCLVAIETEHAAYTESTKNLKRDQMARDVEAMASDEQEAQLAKEI 832

Query: 832 ENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVN 891
                E K D   +  YG P+A   KW S I ++   +       EL  +E A  +  V 
Sbjct: 833 ATNLREKKLD---ERIYGAPRAARGKWASAISLISATTGEKKTYFELPQDENAKCLALVQ 889

Query: 892 FHDKEHGTLLAVGTAKGLQFWPK------RNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
           F       ++ VG     +  P          + G ++ +     G   + LH+T+    
Sbjct: 890 FSKHPDAVMILVGCGVNERLNPSVADPEDTRHIRGCVYTFHMSPTGDRFDFLHRTETPLP 949

Query: 946 PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL 982
             A+  F+G  L G G  LR+YD+G+K+LL KCENK+
Sbjct: 950 VGAIHDFRGMALVGFGRYLRMYDIGQKKLLAKCENKV 986


>gi|341886300|gb|EGT42235.1| hypothetical protein CAEBREN_28831 [Caenorhabditis brenneri]
          Length = 1005

 Score =  971 bits (2511), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/999 (49%), Positives = 660/999 (66%), Gaps = 32/999 (3%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGT-KTPEIVVARGKVLELLRPENS-GRIETLVSTEIF 58
           M+LY+LTLQ  T I  A+ GNFSG  K  EIVV RG  LELL  +   G+I+ +   +IF
Sbjct: 1   MHLYNLTLQGQTAINQAVQGNFSGVPKAQEIVVGRGSALELLTLDTLTGKIKVMCHQDIF 60

Query: 59  GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
           G +RSL  FRLT   +D+I VGSDSGRIVIL+YN  K  F+++HQETFGK+GCRRIVPG 
Sbjct: 61  GIVRSLLAFRLTAGTRDFIAVGSDSGRIVILQYNADKTCFERLHQETFGKTGCRRIVPGH 120

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
           YLA DP+GRA+MIGA E+QKLVY++NRD  A LTISSPLEAHK HT+ Y++ G+D GF+N
Sbjct: 121 YLAGDPRGRALMIGAVERQKLVYIMNRDAEAHLTISSPLEAHKQHTLCYAMVGVDVGFEN 180

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
           P FA +E DY +AD D TG+AA   Q+ LTFYELDLGLNHV RK++EP+ +  N+L+ VP
Sbjct: 181 PTFACLEFDYEDADNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLTDPGNLLIAVP 240

Query: 239 GGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLF 295
           GG DGPSGV+VC EN+++YKN G  PD+R  IPRR +    A+R +LI++ ATH+ K +F
Sbjct: 241 GGNDGPSGVIVCCENYLVYKNLGDQPDIRCPIPRRRNELDDADRTMLIIATATHKTKNMF 300

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           FFL+Q E GD+FKVTLE D + V+E+K+KYFDT+P   +MC+LKSG+LF A+EFGNH LY
Sbjct: 301 FFLVQAENGDVFKVTLETDEDLVTEMKLKYFDTVPPANAMCILKSGFLFVAAEFGNHELY 360

Query: 356 QFQAIGADPDVEASSSTLMETEEGF---QPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
           Q  ++G   D E SS+       GF      FF+P  L++L+ I+ ++SL P+ D  I +
Sbjct: 361 QIASLGEGGDDEFSSAM------GFGENDAAFFEPHELRSLIPIDSMDSLSPLTDAVIGD 414

Query: 413 LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
           +  E+A Q++TL GRG RS+L++LR GL +SEMAVS LPG P+AVWTVKKN+ D++D+YI
Sbjct: 415 VAREDAAQLYTLVGRGARSNLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYI 474

Query: 473 VVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN 532
           VVSF NATL L+IG+TVEE SDSGFL TTP++  S+IGDDSL+Q++  GIRHIR D RIN
Sbjct: 475 VVSFVNATLALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYAEGIRHIRADKRIN 534

Query: 533 EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIAS 591
           EW+ P +R IVK   NR QV +ALSGGEL+YFE+D+ G L E  E+   + D+AC+  + 
Sbjct: 535 EWKAPPRRQIVKCCVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIACMTFSE 594

Query: 592 VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
           + EG   SRFLA+G+ DN +RI+SLDP+D +  LS Q++  PPES+L ++        D 
Sbjct: 595 ISEGELNSRFLALGTVDNAVRIISLDPNDMLMPLSTQNLPCPPESILLIDTP-----NDD 649

Query: 652 ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
               A++ LN GLQNG LFR  VD VTG + D+R+R+LG RP KLF V V GR+A+LC S
Sbjct: 650 GKGVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQVQGRSAILCTS 709

Query: 712 SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
           SR WL Y  + RF LTPLSY  LEYAASF S+QC EG+V+++ + LR+   E+LG  FN 
Sbjct: 710 SRSWLLYHFQRRFHLTPLSYVNLEYAASFCSNQCAEGIVAISSSTLRIIAAEKLGVAFNV 769

Query: 772 TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC---FEAAGMGENGNGNM 828
            +   + TPRR  + P    +V IET+  A T   +   + +     EA    E      
Sbjct: 770 QSFEQKMTPRRIAVHPTLPCLVAIETEHAAYTESTKNLKRDQMARDVEAMASDEQEAQLA 829

Query: 829 DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
            ++     E K D   +  YG P+A   KW S I ++   +       EL  +E A  + 
Sbjct: 830 KEIATNLREKKLD---ERIYGAPRAARGKWASAISLISATTGEKKTYFELPQDENAKCLA 886

Query: 889 TVNFHDKEHGTLLAVGTAKGLQFWPK------RNIVAGYIHIYRFVEEGKSLELLHKTQV 942
            V F       ++ VG     +  P          + G ++ +     G   + LH+T+ 
Sbjct: 887 LVQFSKHPDAVMILVGCGVNERLNPSVADPEDTRHIRGCVYTFHMSPTGDRFDFLHRTET 946

Query: 943 EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
                A+  F+G  L G G  LR+YD+G+K+LL KCENK
Sbjct: 947 PLPVGAIHDFRGMALVGFGRYLRMYDIGQKKLLAKCENK 985


>gi|241560031|ref|XP_002400960.1| spliceosomal protein sap, putative [Ixodes scapularis]
 gi|215501812|gb|EEC11306.1| spliceosomal protein sap, putative [Ixodes scapularis]
          Length = 1019

 Score =  957 bits (2473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/1073 (47%), Positives = 673/1073 (62%), Gaps = 108/1073 (10%)

Query: 190  EADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLV 249
            EAD D TG+AA    + LTFYELDLGLNHV RK+SEP++   N L+ VPGG DGPSGVL+
Sbjct: 1    EADSDPTGEAAQNTHQTLTFYELDLGLNHVVRKYSEPLEEHGNFLIAVPGGSDGPSGVLI 60

Query: 250  CAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFFFLLQTEYGD 305
            C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +A H+ K++FFFL QTE GD
Sbjct: 61   CSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSANHKTKSMFFFLAQTEQGD 119

Query: 306  IFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPD 365
            IFK+TLE D + V+E+K+KYFDTIPV ASMCVLK+G+LF A+EFGNH LYQ   +G + D
Sbjct: 120  IFKITLETDEDMVTEIKLKYFDTIPVAASMCVLKTGFLFVAAEFGNHCLYQIARLGEE-D 178

Query: 366  VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLC 425
             E   S+ +  EEG    FF PR L+NL+ +E+++SL P M   IA+L  E+ PQ++  C
Sbjct: 179  EEPEFSSAIPLEEG-DTFFFAPRALRNLLPVEELDSLSPAMGCTIADLANEDTPQLYVAC 237

Query: 426  GRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI 485
            GRGPRS LR+LR GL  S                                  +A ++L +
Sbjct: 238  GRGPRSCLRVLRHGLEASV---------------------------------HAEVLLCV 264

Query: 486  GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKV 545
             E + +   +      P LAV         QV+P GIRHIR D R+NEWRTPGK+ IVK 
Sbjct: 265  LEWLIDCDQN-----VPILAVH-------WQVYPEGIRHIRADKRVNEWRTPGKKAIVKC 312

Query: 546  GSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPEGRKRSRFLAV 604
              N+ QVVIAL+GGEL+YFE+D TGQL E  ++ EMS D+ C+ +ASVP G +RSRFLAV
Sbjct: 313  AVNQRQVVIALTGGELVYFEMDPTGQLNEYTDRREMSADIICMSLASVPVGEQRSRFLAV 372

Query: 605  GSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGL 664
            G  DNT+RI+SLDP DC+  LS+Q++ + PESL  +E+  +   E        L+LN GL
Sbjct: 373  GLADNTVRIISLDPSDCLSPLSMQALPATPESLSIVEMGLA---EMDPSSQGVLYLNIGL 429

Query: 665  Q-------------NGVLF-----------RTVVDMVTGQLSDS---------RSRFLGL 691
            Q             N V               +V  V   L  S          S FLG 
Sbjct: 430  QVSEMAVSELPGNPNAVWTVKRKADEDFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGT 489

Query: 692  RPPKLFSVVVGGRAAM--LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGV 749
             P  L    +G  A +  L +SSR WL Y ++ RF LTPLSYETLE+A+ FSS+QC EG+
Sbjct: 490  TP-TLSCAQIGDDALVQALAMSSRSWLSYYYQNRFHLTPLSYETLEFASGFSSEQCPEGI 548

Query: 750  VSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AE 805
            V+++ N LR+  +E+LG  FN+ + PL YTPR+FV+      +V++ETD  A T     +
Sbjct: 549  VAISTNTLRILALEKLGAVFNQVSTPLEYTPRKFVVNHDTNHLVVVETDHNAYTEKMKVQ 608

Query: 806  EREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVL 865
             ++   +E  EAAG GE      +           + L +  +G PKA S  W S IRVL
Sbjct: 609  RKQQMAEEMVEAAGEGEQ-----ELAAEMAAAFLSETLPEAVFGAPKAGSGMWASVIRVL 663

Query: 866  DPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIY 925
            +P    + C + L+ NEAA S+  V F        + VG A+ +Q  P+     G +  Y
Sbjct: 664  NPSDGQSLCKVALEQNEAALSVALVRFTSHPDEQFVVVGAAREMQLNPRVCRGGGLLLTY 723

Query: 926  RFVEEGK-------SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC 978
            R     +        LEL+H T VE  P ALC FQGRLLAG+G  LRLYDLG+K+LLRKC
Sbjct: 724  RLAPNPEEPMAGPTQLELVHATPVEEAPTALCPFQGRLLAGVGKCLRLYDLGRKKLLRKC 783

Query: 979  ENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDF 1038
            ENK  PN IVSI    +R+ V D+QESF F +Y+R ENQL IFADDSVPRW+TA+  +D+
Sbjct: 784  ENKYIPNAIVSIQAMGNRVVVSDVQESFFFLRYKRQENQLVIFADDSVPRWITASCMLDY 843

Query: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
            +T+AGADKFGN+  +RLP  +SD+++EDPTG K  W++G L G+  K + I  FH+G+ V
Sbjct: 844  ETVAGADKFGNVSIIRLPSSISDDVDEDPTGIKSLWDRGWLGGSSQKADVISNFHIGETV 903

Query: 1099 TSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHM 1158
             SLQKA+L+PGG ES++Y T+ G++G ++ F++ +D DFF HLEMHMR E+PPLCGRDH+
Sbjct: 904  LSLQKATLIPGGSESLVYVTLSGTVGVLVPFTAHEDHDFFQHLEMHMRYENPPLCGRDHL 963

Query: 1159 AYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            ++RS+YFPVK+VIDGDLCEQF +L    Q+ IA+ELDR P E+ KKLE+IR +
Sbjct: 964  SFRSSYFPVKNVIDGDLCEQFNSLDPSKQKSIAEELDRNPSEVSKKLEDIRTR 1016


>gi|451852814|gb|EMD66108.1| hypothetical protein COCSADRAFT_34693 [Cochliobolus sativus ND90Pr]
          Length = 1235

 Score =  954 bits (2467), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/1242 (41%), Positives = 738/1242 (59%), Gaps = 45/1242 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGR-IETLVSTEIFG 59
            M LY+LT++QPT    AI+G+F G    +I+ A G  L +L      +  + L S ++FG
Sbjct: 1    MSLYALTVKQPTATQDAISGDFLGNGKQQILTASGSRLAILEVSRRQKGFQELYSQDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR +A+FR+ G  KD+IV+ +DSGR+V  EY P ++ F  +H ETFGKSG RR+VPG+Y
Sbjct: 61   IIRRIAKFRIAGGTKDHIVITTDSGRLVTYEYLPDEHTFKTLHFETFGKSGIRRVVPGEY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA+MI + EK KLVY+L R     + ISSPLEAHK  T+VY + G+D G+DNP
Sbjct: 121  LAADPKGRAIMIASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DYS ++ D TG+A  E +K L +YELDLGLNH+ RKWSEPVD  AN L  VPG
Sbjct: 181  MFATLEVDYSNSETDPTGEAYEEIKKELVYYELDLGLNHIVRKWSEPVDRTANTLFRVPG 240

Query: 240  GGDGPSGVLVCAENFVIYK---NQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK-T 293
            G   PSGVL C E+ + Y+   N      R  IPRR  A     R  +IV+   +  K  
Sbjct: 241  GPSAPSGVLCCGEDSITYRRIFNNKSSVRRLAIPRREGATEDPNRKRMIVAGTLYSLKGG 300

Query: 294  LFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
             FF+LLQTE GD+FK+T++  N  V  +KIKYFDTIPVT S+C+L++G+++AA E G+  
Sbjct: 301  DFFYLLQTEDGDVFKLTVDAPNGTVENIKIKYFDTIPVTTSICILRAGFVYAACESGDRI 360

Query: 354  LYQFQAIGADPD--VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
            LY+ +++G + D  V  SS   ++ E  F P FF+PR L NL  +E + SL PIMDM +A
Sbjct: 361  LYELESLGDETDDPVFESSQFPVDPEASFAPPFFRPRALVNLTAVEAMPSLNPIMDMEVA 420

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            N   E+APQI+T+ G G RSS R  R  L V ++  S LP   S VWT K    DE D  
Sbjct: 421  NPALEDAPQIYTINGTGGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTSEDETDTL 480

Query: 472  IVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR----- 526
            IV+  ++ TLVL IG+ VEE S++GFL  T +L V   G+D ++Q+HP GIRHI+     
Sbjct: 481  IVLCLHSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQFP 540

Query: 527  ------EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-E 579
                      + +W+ P  RTIV   +N  QV IALS G+++YFE D  G L   E+   
Sbjct: 541  NDDASATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAEEEIV 600

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPD---DCMQILSVQSVSSPPES 636
            +   + CL +  VPEG  R+ FLAVG  D T+RI +L PD   + ++ +SVQ+++SPP  
Sbjct: 601  LESTINCLAMPDVPEGSVRAFFLAVGCSDQTVRIYNLSPDMEGNILRSISVQALTSPPSD 660

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            L    +       D +    S FL+ GL++GV  R+V+D +TG + D+R RFLG  P K 
Sbjct: 661  LTINLMT------DKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKF 714

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
              V V G  A+L ++SRPWLGY H   G   LTPL+Y + + A +F   Q  +G++ V+ 
Sbjct: 715  AKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYISFKSAWNFDGSQ-FKGIICVSA 773

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
            N LR+FT   L +     ++PL+YTPR+ V    + +  +I++D   ++A+ R+    + 
Sbjct: 774  NELRIFTFNDLTDNTTYESIPLKYTPRKMVGYHDQGVFYVIQSDNNTISADRRQQLIAQS 833

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT-T 873
                  G NG+   +Q     D +++ P  D  +GYP+A+   W SCI+V+DP +  T T
Sbjct: 834  CGKKEDGTNGSMETEQSNGAADSDEF-PAVD--FGYPRAQG-SWASCIQVVDPVTEKTVT 889

Query: 874  CLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKS 933
              +EL  N +  S   V F  +     LAVGTAK L F P +   +  I IY+    G+ 
Sbjct: 890  HTVELNGNISLVSAALVFFESRNDEAFLAVGTAKDLSFTPYK-FSSASIQIYKINPTGRE 948

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN-KLFPNTIVSINT 992
            LE  H+T V   PLAL  F+G+LLAG+G  L LYD G K +LRK +     P  I  + T
Sbjct: 949  LEFFHETTVSDPPLALLAFKGKLLAGVGRHLCLYDCGMKSVLRKAQAPNCVPTRITGLKT 1008

Query: 993  YRDRIYVGDIQESFHFCKYRRD--ENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
               R+ V D  +S  +  ++     N+L  F DD++ R  TA+  +D+DT  G DKFGNI
Sbjct: 1009 QGSRLVVSDQAQSVTYVVHKDQVHPNRLIPFVDDTIARHTTASEMLDYDTTVGGDKFGNI 1068

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG 1110
            + VR PQ VS+  +E P G  +  ++  L G PN+++ I  +   D+  S+QK  L+ GG
Sbjct: 1069 WLVRCPQKVSESSDESPDGSDLLVDKSYLGGTPNRLDLIAHYFTNDIPVSIQKTVLLSGG 1128

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDV 1170
               V +  + G+LGA++ F+SR     F  LE+ +R +  PL GRDH+A+RS + PVK V
Sbjct: 1129 ERVVFWAGLQGTLGALIPFNSRRSHKMFQQLELQLRSDDKPLSGRDHLAFRSYFAPVKSV 1188

Query: 1171 IDGDLCEQFPTLSLDLQRKIADEL---DRTPGEILKKLEEIR 1209
            IDGDL E+F  L  D +  IA ++   + TP +I + +  +R
Sbjct: 1189 IDGDLIERFLVLPRDKRESIAGQITGSEWTPSQIDESIWNMR 1230


>gi|452002380|gb|EMD94838.1| hypothetical protein COCHEDRAFT_1128717 [Cochliobolus heterostrophus
            C5]
          Length = 1235

 Score =  954 bits (2465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/1244 (42%), Positives = 743/1244 (59%), Gaps = 49/1244 (3%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGR-IETLVSTEIFG 59
            M LY+LT++QPT    AI+G+F G    +I+ A G  L +L      +  + L S ++FG
Sbjct: 1    MSLYALTVKQPTATQDAISGDFLGNGKQQILTASGSRLAILEVSRRQKGFQELYSQDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR +A+FR+ G  KD+IV+ +DSGR+V  EY P ++ F  +H ETFGKSG RR+VPG+Y
Sbjct: 61   IIRRIAKFRIAGGTKDHIVITTDSGRLVTYEYLPDEHTFKTLHFETFGKSGIRRVVPGEY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA+MI + EK KLVY+L R     + ISSPLEAHK  T+VY + G+D G+DNP
Sbjct: 121  LAADPKGRAIMIASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DYS ++ D TG+A  E +K L +YELDLGLNH+ RKWSEPVD  AN L  VPG
Sbjct: 181  MFATLEVDYSNSETDPTGEAYEEIKKELVYYELDLGLNHIVRKWSEPVDRTANTLFRVPG 240

Query: 240  GGDGPSGVLVCAENFVIYK---NQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK-T 293
            G   PSGVL C E+ + Y+   N      R  IPRR  A     R  +IV+   +  K  
Sbjct: 241  GPSAPSGVLCCGEDSITYRRIFNNKSSVRRLAIPRREGATEDPNRKRMIVAGTLYSLKGG 300

Query: 294  LFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
             FF+LLQTE GD+FK+T++  N  V  +KIKYFDTIPVT S+C+L++G+++AA E G+  
Sbjct: 301  DFFYLLQTEDGDVFKLTVDAPNGTVENIKIKYFDTIPVTTSICILRAGFVYAACESGDRI 360

Query: 354  LYQFQAIGADPD--VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
            LY+ +++G + D  V  SS   ++ E  F P FF+PR L NL  +E + SL PIMDM +A
Sbjct: 361  LYELESLGDETDDPVFESSQFPVDPEASFAPPFFRPRALVNLTAVEAMPSLNPIMDMEVA 420

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            N   E+APQI+T+ G G RSS R  R  L V ++  S LP   S VWT K    DE D  
Sbjct: 421  NPALEDAPQIYTINGTGGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTSEDETDTL 480

Query: 472  IVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR----- 526
            IV+  ++ TLVL IG+ VEE S++GFL  T +L V   G+D ++Q+HP GIRHI+     
Sbjct: 481  IVLCLHSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQFP 540

Query: 527  ------EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-E 579
                      + +W+ P  RTIV   +N  QV IALS G+++YFE D  G L   E+   
Sbjct: 541  NDDASATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAEEEIV 600

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPD---DCMQILSVQSVSSPPES 636
            +   + CL +  VPEG  R+ FLAVG  D T+RI +L PD   + ++ +SVQ+++SPP  
Sbjct: 601  LDSTINCLAMPDVPEGSVRAFFLAVGCSDQTVRIYNLSPDMEGNILRSISVQALTSPPSD 660

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            L    +       D +    S FL+ GL++GV  R+V+D +TG + D+R RFLG  P K 
Sbjct: 661  LTVNLMT------DKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKF 714

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
              V V G  A+L ++SRPWLGY H   G   LTPL+Y + + A +F   Q  +G++ V+ 
Sbjct: 715  AKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYISFKSAWNFDGSQ-FKGIICVSA 773

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
            N LR+FT   L +     ++PL+YTPR+ V    + +  +I++D   ++A+ R+   +  
Sbjct: 774  NELRIFTFNDLTDNTTYESIPLKYTPRKMVGYHDQGVFYVIQSDNNTISADRRQ---QLI 830

Query: 815  FEAAGMGENG-NGNMD-QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT 872
             ++ G  E+G NG+M+ +  NG  ++   P  D  +GYP+A+   W SCI+V+DP +   
Sbjct: 831  AQSGGKKEDGTNGSMETEQSNGATDSDEFPAVD--FGYPRAQG-SWASCIQVVDPVTEKA 887

Query: 873  -TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
             T  +EL  N +  S   V F  +     LAVGTAK L F P +   +  I IY+    G
Sbjct: 888  VTHTIELNGNISLVSAALVFFESRNDEAFLAVGTAKDLSFTPYK-FSSASIQIYKINPTG 946

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN-KLFPNTIVSI 990
            + LE  H+T V   PLAL  F+G+LLAGIG  L LYD G K +LRK +     P  I  +
Sbjct: 947  RELEFFHETTVSDPPLALLAFKGKLLAGIGRHLCLYDCGMKSVLRKAQAPNCVPTRITGL 1006

Query: 991  NTYRDRIYVGDIQESFHFCKYRRD--ENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
             T   R+ V D  +S  +  ++     N+L  F DD+V R  TA+  +D+DT  G DKFG
Sbjct: 1007 KTQGSRLVVSDQAQSVTYVVHKDQVHPNRLIPFVDDTVARHTTASEMLDYDTTVGGDKFG 1066

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP 1108
            NI+ VR PQ VS+  +E P G  +  ++  L G PN+++ I  +   D+  S+QK  L+ 
Sbjct: 1067 NIWLVRCPQKVSESSDESPDGSDLLVDKSYLGGTPNRLDLIAHYFTNDIPVSIQKTVLLS 1126

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK 1168
            GG   V +  + G+LGA++ F+SR     F  LE+ +R +  PL GRDH+A+RS + PVK
Sbjct: 1127 GGERVVFWAGLQGTLGALIPFNSRRSHKMFQQLELQLRSDDKPLSGRDHLAFRSYFAPVK 1186

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADEL---DRTPGEILKKLEEIR 1209
             VIDGDL E+F  L  D +  IA ++   + TP +I + +  +R
Sbjct: 1187 SVIDGDLIERFLVLPRDKRESIAGQITGSEWTPSQIDESIWNMR 1230


>gi|396488712|ref|XP_003842924.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
 gi|312219502|emb|CBX99445.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
          Length = 1236

 Score =  946 bits (2445), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/1244 (41%), Positives = 749/1244 (60%), Gaps = 54/1244 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGR-IETLVSTEIFG 59
            M LY+LT++ P+    AI+G+F G    +I+ A G  L +L      +  + L S ++FG
Sbjct: 7    MSLYALTVKHPSATQDAISGDFLGNGKQQILTANGSRLAILEVSRRQKGFQELYSQDMFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R +A+FR+ G  KD+IV+ +DSGR+V  EY P ++ F  +H ET+GKSG RR+VPG+Y
Sbjct: 67   IVRRIAKFRIAGGTKDHIVITTDSGRLVTYEYLPDEHAFKTVHFETYGKSGIRRVVPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA+M+ + EK KLVY+L R     + ISSPLEAHK  T+VY + G+D G+DNP
Sbjct: 127  LAADPKGRAIMLASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA+IE+DYS ++ D +G+A  E +K + +YELDLGLNH+ RKWSEP+D  AN L  VPG
Sbjct: 187  MFASIEVDYSSSETDPSGEAYDEIKKEVVYYELDLGLNHIVRKWSEPIDRTANTLFRVPG 246

Query: 240  GGDGPSGVLVCAENFVIYK---NQGHPDVRAVIPRRADLPAE---RGVLIVSAATHRQK- 292
            G + PSGVLVC E+ + Y+   NQ     R  IPRR + P E   R  +IV+   +  K 
Sbjct: 247  GANAPSGVLVCGEDNITYRRIFNQKENVHRLAIPRR-EGPTEDPNRKRMIVAGTLYSLKG 305

Query: 293  TLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
              FF+LLQTE GD+FK+T+E  N  V ++KIKYFDTIPV  S+C+L++G+++AA E G+ 
Sbjct: 306  GDFFYLLQTEDGDVFKLTVEASNGKVEKIKIKYFDTIPVCTSICILRAGFVYAACESGDR 365

Query: 353  ALYQFQAIG---ADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR 409
             LY+ +++G    DP + +S    ++T+  F P +F+PR L NL  +EQ+ SL PIM M 
Sbjct: 366  ILYELESLGDETEDP-LFSSDQFPVDTDAKFAPPYFKPRALTNLTAVEQMPSLNPIMGME 424

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
            +AN   E+APQI+T+ G G RSS R  R  L V ++  S LP   S VWT K   +DE D
Sbjct: 425  VANPALEDAPQIYTINGTGGRSSFRSTRNALEVLDLIESPLPQNASDVWTTKLTSDDETD 484

Query: 470  AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR--- 526
              IV+  ++ TLVL IG+ VEE S++GFL  T +L V   G+D ++Q+HP GIRHI+   
Sbjct: 485  TLIVLCLHSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQ 544

Query: 527  --------EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH 578
                        + +W+ P  RTIV   +N  QV IALS G+++YFE D  G L   E+ 
Sbjct: 545  FPDNDANATHQSLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAEEE 604

Query: 579  -EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPD---DCMQILSVQSVSSPP 634
              +   + CL +  VPEG  R+ FLAVG  D T+RI +L PD   + ++ +SVQ+++SPP
Sbjct: 605  IALDSTINCLAMPDVPEGSVRAFFLAVGCSDQTVRIFNLSPDMEGNILRSISVQALTSPP 664

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
              L    +       D +    S FL+ GL++GV  R+V+D +TG + D+R RFLG  P 
Sbjct: 665  SDLTINLMS------DKSPRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPI 718

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSV 752
            K   V V G  A+L ++SRPWLGY H   G   LTPL+Y   + A +F   Q  +G++ V
Sbjct: 719  KFAKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYIAFKSAWNFDGSQ-FKGIICV 777

Query: 753  AGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK 812
            + N LR+FT   L +      +PL+YTPR+ V   ++ +  IIE++   L A+ R+   +
Sbjct: 778  SANELRIFTFNDLTDNTTYENIPLKYTPRKMVGYHEQGIFYIIESECNTLNADTRQNLIQ 837

Query: 813  ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT 872
               +A+   ENGNG   +  NG +E+   P  D  +GYP+A+  +W SCI+ +DP S   
Sbjct: 838  ---KASKQDENGNG---EATNGTEESDELPAVD--FGYPRAQG-RWASCIQAVDPVSEKA 888

Query: 873  -TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
             T  +EL+ N++  S   V F  +     LAVGTAK L F P +   A  I IY+    G
Sbjct: 889  VTHTIELKTNQSLVSAALVFFESRGEDAFLAVGTAKDLSFTPYKYSGAS-IQIYKISPNG 947

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN-KLFPNTIVSI 990
            +  E  H+T+V   PLAL  F+G+L+AG+G  L LYD G K +LRK +        I  I
Sbjct: 948  REFEFFHETEVGEPPLALLAFKGKLIAGVGRHLCLYDCGMKSVLRKAQAPNCVATRITDI 1007

Query: 991  NTYRDRIYVGDIQESFHFCKYRRD--ENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
             T   R+ V D  +S  +  ++     N+L  FADD+VPR  +A+  +D++T  G DKFG
Sbjct: 1008 KTQGSRLVVSDQAQSVTYVVHKDQVHPNRLIPFADDTVPRHTSASDMLDYETTVGGDKFG 1067

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP 1108
            NI+ VR P  VS+  +E P G  +  ++  L G PN+++ +  +   D+  S+QK  L+ 
Sbjct: 1068 NIWLVRCPPKVSEASDESPDGSDLLVDKSFLGGTPNRLDLVAHYFANDIPVSIQKTVLLS 1127

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK 1168
            GG   + +  + G+LGA++ F+SR     F  LE+ +RQ+  PL GRDH+AYRS + PVK
Sbjct: 1128 GGERIIFWAGLQGTLGALIPFNSRRQHKMFQQLELQLRQDDKPLSGRDHLAYRSYFAPVK 1187

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADEL---DRTPGEILKKLEEIR 1209
             VIDGDL E+F  LS D +  IA ++   + TP  I + +  +R
Sbjct: 1188 CVIDGDLIERFLVLSRDKRESIAGQMTGAEWTPSMIDEAIWNMR 1231


>gi|213405251|ref|XP_002173397.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
            yFS275]
 gi|212001444|gb|EEB07104.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
            yFS275]
          Length = 1166

 Score =  940 bits (2430), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/1219 (40%), Positives = 740/1219 (60%), Gaps = 73/1219 (5%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
            ++LYSLT Q    + ++     +G K  EIV+A G  + + R + N GR+  ++S   +G
Sbjct: 7    LFLYSLTAQNSNYVQSSCVAQLTGKKAQEIVIATGSRVHVYRIDPNEGRMNLMISQNCYG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             +R++A  RLTG +KDY+V+ SDSGR  ILEY+  KN    ++QE FGKSG RRIVPG+Y
Sbjct: 67   IVRNIAPLRLTGFKKDYLVLTSDSGRFTILEYDIGKNKLVSVYQEAFGKSGIRRIVPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA+D KGRA M+ + EK KLVYVLNRD+ A LTISSPLEAHK+ TI + + G+D G++NP
Sbjct: 127  LALDAKGRAAMVASTEKNKLVYVLNRDSEANLTISSPLEAHKAGTICFDLVGLDTGYENP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFAA+E++YS+ D D  G+    ++K LT+YELDLGLNHV ++WS+ VD  A  L+ VPG
Sbjct: 187  IFAALEVEYSDLDHDPLGELYKHSEKVLTYYELDLGLNHVVKRWSKVVDRSAYKLIRVPG 246

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVL--IVSAATHRQKTLFFF 297
            G DGPSGV+V +  ++ Y++         IP R         L  IVSA  H+ +  FF+
Sbjct: 247  GNDGPSGVIVISTGWISYRHLQRQSHFVPIPTRETKATTNTALPIIVSAVMHKMRDSFFY 306

Query: 298  LLQTEYGDIFKVTLE-HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            LLQ   GD+ K+T+E  D+  V EL+IKYFDTIP  A + +LKSG LFA  E GNH LYQ
Sbjct: 307  LLQNSDGDLLKLTMELDDHSQVKELRIKYFDTIPFAAILNILKSGLLFAGCEGGNHHLYQ 366

Query: 357  FQAIGADPD-VEASSSTLMETEEGFQP--VFFQPRGLKNLVRIEQVESLMPIMDMRIANL 413
            F+++  D D  E SS+   E +    P  + ++   L+N+  ++++ SL P+ D  +   
Sbjct: 367  FESLAIDDDEPEFSSANFSEEQSKHSPKKLTYKLHPLQNISLLDEIPSLFPLTDAIVTRT 426

Query: 414  FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIV 473
              +   Q++TLCGR   +SLR+L+ G++ +E+ +S+LPG P A+WTVK+ +ND +D Y+V
Sbjct: 427  STDANSQLYTLCGRHKEASLRLLKRGVSATEVVLSELPGAPIAIWTVKQKLNDPYDKYMV 486

Query: 474  VSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINE 533
            +SF N TLVLSIGETVEEV DSG L +  +L V  +G  S++Q+H  GIR I  +  + E
Sbjct: 487  LSFTNGTLVLSIGETVEEVLDSGLLSSVSTLNVRQLGRSSVVQIHSKGIRCISANKEVTE 546

Query: 534  WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV-DMTGQLLEV-EKHEMSGDVACLDIAS 591
            W+TP    I     N  Q+V++LS  EL YFE+ D  GQL E  E+  ++  V  L +  
Sbjct: 547  WKTPADTVITNSAINEQQIVVSLSNDELAYFEMDDEYGQLNEYQERKLLTSPVTALALGP 606

Query: 592  VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
            VP+G KRS FL + S D+T+RI+SLDP   ++ LSVQ++S+P  SL  + ++ + G E  
Sbjct: 607  VPQGSKRSNFLCLASEDSTVRIVSLDPYTTLENLSVQALSAPASSLCMVNMEVT-GYE-- 663

Query: 652  ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
                 +L+L+ GL NGV  RTVVD+ +GQL D+R+RFLG RP +L  ++V G+ ++L ++
Sbjct: 664  -----TLYLHIGLSNGVYLRTVVDVTSGQLIDTRTRFLGPRPIRLSPIIVRGKQSVLAIA 718

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
            +R +L Y +     ++PL Y  LEYA SF+S QC EG+V +  N L++FT+E   +   +
Sbjct: 719  NRSYLSYSNEQTLQVSPLLYSPLEYADSFASHQCPEGIVGIHQNILKIFTVEATHDDLKQ 778

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQM 831
               PL  TP+R +  P+  ++ I++++             + C                 
Sbjct: 779  DVFPLSCTPKRVIKHPELDILYILQSE-------------RHC----------------- 808

Query: 832  ENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE-LQDNEAAFSICTV 890
                               P + +++W++ + + D    N   ++E L  NEA+F +C  
Sbjct: 809  -------------------PNS-TNEWITVLSIFD---MNEKKMIEGLTFNEASFDLCYA 845

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
             F  +  G  L   +A       K++   G + +Y   + G SL+ + +T+ +     L 
Sbjct: 846  FFRSRNEG-FLVCSSAINYDI-SKQSCSNGVLRVYSLNDGGLSLKCISETETDSFARVLK 903

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
             F GRL+AG+GP LR+YDLG K+LLRK E +  PN I +I T   RI V D Q S  F  
Sbjct: 904  PFHGRLIAGVGPFLRVYDLGNKKLLRKSEVRAVPNFITTIQTQGYRIIVTDAQHSAFFVV 963

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            ++ ++N+  +FADD V RW TA   +D+DT+ G DKF N++ +R P+ VS   +E+ +G 
Sbjct: 964  FKPEDNRYIVFADDCVARWATATAMVDYDTVVGGDKFSNLWLLRCPESVSQLADEENSGS 1023

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFS 1130
            K+  E+  L+ +P+K++ +    V D+ TS+QK  LV G  + +++  ++G++G +  F 
Sbjct: 1024 KLLHEKPFLHSSPHKLDLMAHTFVNDIPTSIQKVQLVEGARDVIMWTGLLGTIGVLSPFV 1083

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
            +R+DV FF  LE  +R E   + GRDH+AYRS Y PVK V+DGDLCEQ+  L  D Q  I
Sbjct: 1084 NREDVRFFQQLESLLRAEDLSIVGRDHLAYRSYYVPVKCVVDGDLCEQYYNLPRDKQESI 1143

Query: 1191 ADELDRTPGEILKKLEEIR 1209
            A+ELDRT  E+ KK+E++R
Sbjct: 1144 ANELDRTVIEVCKKIEDLR 1162


>gi|330932624|ref|XP_003303845.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
 gi|311319874|gb|EFQ88052.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
          Length = 1247

 Score =  932 bits (2410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/1253 (40%), Positives = 738/1253 (58%), Gaps = 53/1253 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGR-IETLVSTEIFG 59
            M LY+LT++QPT    AI+G+F G    +I+ A G  L +L      +  + L S ++FG
Sbjct: 1    MSLYALTVKQPTATQDAISGDFLGNGKQQILTASGSRLAILEVSRRQKGFQELYSQDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR +A+FR+ G  KD+IV+ +DSGR+V  EY P +  F  +H ETFGKSG RR+VPG+Y
Sbjct: 61   IIRGIAKFRIAGGTKDHIVITTDSGRLVTYEYLPDEQSFKTVHFETFGKSGIRRVVPGEY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA+MI + EK KLVY+L R     + ISSPLEAHK  T+VY + G+D G+DNP
Sbjct: 121  LAADPKGRAIMIASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DYS ++ D TG+A  E +K L +YELDLGLNH+ RKWSEPVD  AN L  VPG
Sbjct: 181  MFATLEVDYSSSETDPTGEAYDEIKKELVYYELDLGLNHIVRKWSEPVDRTANTLFRVPG 240

Query: 240  GGDGPSGVLVCAENFVIYK---NQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKT 293
            G + PSGVL C E+ + Y+   N      R  IPRR    + P  + ++I       +  
Sbjct: 241  GPNAPSGVLCCGEDSITYRRIFNNKSNVHRLAIPRREGATEDPNRKRMIIAGTLYSLKGG 300

Query: 294  LFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
             FF+LLQTE GD+FK+T+E  +  V ++KIKYFDTIP+  S+C+L++G+++AA E G+  
Sbjct: 301  DFFYLLQTEDGDVFKLTVEAPSGTVDKIKIKYFDTIPIATSICILRAGFVYAACESGDRI 360

Query: 354  LYQFQAIG---ADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI 410
            LY+ +++G    DP  E S    ++ E  F P FF+PR L NL  +E + SL PIM M +
Sbjct: 361  LYELESLGDETEDPVFE-SDQFPVDPEASFAPPFFKPRALVNLTAVESMPSLNPIMGMEV 419

Query: 411  ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA 470
            AN   E+APQ++T+ G   RSS R  R  L V ++  S LP   S VWT K    DE D 
Sbjct: 420  ANPALEDAPQVYTINGTSGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTSEDEADT 479

Query: 471  YIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR---- 526
             IV+  ++ TLVL IG+ VEE S++GFL  T +L V   G+D ++Q+HP GIRHI+    
Sbjct: 480  LIVLCLHSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQF 539

Query: 527  -------EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH- 578
                       + +W  P  RTIV   +N  QV IALS G+++YFE D  G L   E+  
Sbjct: 540  PNDDAGATHANLMDWHPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAEEEI 599

Query: 579  EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPD---DCMQILSVQSVSSPPE 635
             +   + CL +  VPEG  R+ FLAVG  D T+RI +L PD   + ++ +SVQ+++SPP 
Sbjct: 600  SLDSTINCLAMPDVPEGSVRAFFLAVGCSDQTVRIFNLSPDMDGNILRSISVQALTSPPS 659

Query: 636  SLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPK 695
             L    +       D +    S FL+ GL++GV  R+V+D +TG + D+R RFLG  P K
Sbjct: 660  DLTINLMT------DRSPRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIK 713

Query: 696  LFSVVVGGRAAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVA 753
               V V G   +L ++SRPWLGY H   G   LTPL+Y   + A +F   Q  +G++ V+
Sbjct: 714  FAKVTVAGEPGILAMTSRPWLGYTHPRTGVLQLTPLNYIPFKSAWNFDGSQ-FKGIICVS 772

Query: 754  GNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREA---- 809
             N LR+FT   L +      + LRYTPR+ V    + +  +I++D   ++A+ R+     
Sbjct: 773  ANELRIFTFNDLTDNTTYENISLRYTPRKMVGYHDQGVFYVIQSDNNTISADRRQQLIAQ 832

Query: 810  --AKKECFEAAGMGENGNGNMDQMENGDDEN---KYDPLSDEQYGYPKAESDKWVSCIRV 864
               KKE  +     +   G      NGD  N   + + L    +GYP+AE   W SCI+V
Sbjct: 833  ANMKKEDSDMKQENDTKGGMELAQINGDAANGSAESEELPAIDFGYPRAEG-SWASCIQV 891

Query: 865  LDPRSANTTC-LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIH 923
            +DP +  +    +E+  N++  S   V F  + +   LAVG AK + F P +   +  I 
Sbjct: 892  VDPVTEKSVIHTVEINGNQSLVSAALVFFESRGNEAFLAVGLAKDMSFQPFK-FSSASIQ 950

Query: 924  IYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN-KL 982
            +Y+   +G+ LEL ++T V   PLAL  F+G+L+AG+G  L LYD G K LLRK +    
Sbjct: 951  VYKISPDGRELELFNETAVSEPPLALLAFKGKLIAGVGRHLCLYDCGMKSLLRKAQAPNS 1010

Query: 983  FPNTIVSINTYRDRIYVGDIQESFHFCKYRRD--ENQLYIFADDSVPRWLTAAHHIDFDT 1040
             P  IV I T   R+ V D  +S  +  ++     N+L  F DDS+ R  +A+  +D+DT
Sbjct: 1011 VPTRIVDIKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSISRHTSASEMLDYDT 1070

Query: 1041 MAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTS 1100
              G DKFGNI+ VR P+++S+  +E P G  +  ++  L G PN+++ I  +   D+  S
Sbjct: 1071 TIGGDKFGNIWLVRCPKEISESSDESPDGSDLLVDKSYLGGTPNRLDLIAHYFTNDIPVS 1130

Query: 1101 LQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY 1160
            +QKA+L+ GG + + +  + G+LGA++ F+SR +   F  LE+ +R E  PL GRDH+ Y
Sbjct: 1131 IQKANLISGGDKVIFWAGLQGTLGALIPFTSRRNHKLFQQLELSLRSEDKPLSGRDHLTY 1190

Query: 1161 RSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADEL---DRTPGEILKKLEEIRN 1210
            RS Y PVK VIDGDL E++  LS D +  IA ++   + TP  I +++  +R+
Sbjct: 1191 RSYYAPVKSVIDGDLIERYLVLSRDKRESIAAQMTGSEWTPSSIDEQIWGMRS 1243


>gi|156084934|ref|XP_001609950.1| splicing factor 3b, subunit 3, 130kD [Babesia bovis T2Bo]
 gi|154797202|gb|EDO06382.1| splicing factor 3b, subunit 3, 130kD, putative [Babesia bovis]
          Length = 1169

 Score =  931 bits (2405), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/1231 (42%), Positives = 759/1231 (61%), Gaps = 85/1231 (6%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
             + LTLQ+PTGI  A+ GNFS  K  EIVV R   +ELL P++SG++ +L  +E+FG +R
Sbjct: 4    FFHLTLQRPTGITQAVQGNFSAPKAQEIVVVRSHTIELLSPDDSGKLRSLCVSEVFGIVR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
             ++ FRLTG+Q+DY+VV SDSGR+VILEY      F ++H ET+GK+G RRIVPGQYLAV
Sbjct: 64   VVSTFRLTGTQRDYLVVCSDSGRLVILEYCNVSATFKRVHCETYGKTGIRRIVPGQYLAV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGRA+++GA EK+K VY+LNRD+ A LTISSPLEAHKS +I +++ G+D GF+NPIF 
Sbjct: 124  DPKGRALIVGAVEKEKFVYILNRDSKANLTISSPLEAHKSRSICHALVGLDVGFENPIFV 183

Query: 183  AIELDYSEADQ---DSTGQAASE-AQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            +IE  Y   D    D   +   +  +K L+F+E+DLGLNHV RK + PVD  A+ L+ +P
Sbjct: 184  SIEESYEAVDAAQVDEDEEVTDDIIKKGLSFWEMDLGLNHVVRKMTLPVDISAHHLIPIP 243

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
             GGDGP GV+VC ENF++Y+   HP+V    PRR ++  ++ +++VS+A H+ +  FF L
Sbjct: 244  -GGDGPGGVIVCCENFLLYRKIDHPEVLCAYPRRLEMAQDKPLMMVSSALHKMRDFFFVL 302

Query: 299  LQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            +Q+EYGDI+K+ L H+   V+E+  +YFDT+P+  S+C+L++GYLF A+EFG+H LYQF 
Sbjct: 303  VQSEYGDIYKIELFHEEGKVNEIVCRYFDTVPLGNSICILRAGYLFVAAEFGDHQLYQFT 362

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
             IG + +    SS   + ++    V F+PR  +NL  ++++ SL  I D+++ ++     
Sbjct: 363  GIGTNENDPLCSSIHPQGKDAI--VAFKPRVNQNLQLVDELSSLSAITDLKVIDVQGLGQ 420

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNN 478
             QIF  CG+G RS+LR+LR GL+V E+A ++LPG P  VWTV   V+  +D +I+V F  
Sbjct: 421  QQIFLGCGKGERSTLRVLRHGLSVEELADNELPGRPKQVWTVPTGVDSIYDGFILVGFEG 480

Query: 479  ATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPG 538
             TLVLS+GE VEEV+DS FL +  +L VS++GD S +QVH  G+RH+  D ++ EW+TP 
Sbjct: 481  NTLVLSVGEAVEEVTDSCFLTSITTLHVSMMGDGSYIQVHDGGVRHVY-DMKVREWKTPT 539

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
             + +    SN+ Q+V+ALSGGEL+YFE+D +  L+EV K  ++ ++ CL +    +GR  
Sbjct: 540  AKRVKVAASNQHQLVLALSGGELVYFELDESHTLVEVAKRSLNVEITCLSLQPTAKGRLM 599

Query: 599  SRFLAVGSYDNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQASVGGEDGADHPA 656
            + F++VG+ DN +R+LSLD    ++  S Q +  +S PES+   E Q          HP 
Sbjct: 600  ANFMSVGALDNLVRVLSLDRQ--LKQYSTQLLPNNSTPESVCIAEFQIGT-------HPV 650

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
             L L  GL  GV+ R  +D V+G LSD  +RFLG R  K   +    +  ++  S RPWL
Sbjct: 651  -LMLVVGLNTGVMIRATIDAVSGALSDQYTRFLGSRAVKFKYI----KNQVIGTSDRPWL 705

Query: 717  GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
             Y ++G     PLSY+TLE  ASFSS  C +G V+++G+ LR+F   RLGETF+E  LPL
Sbjct: 706  LYEYQGVVQCLPLSYDTLESVASFSSPLCNDGYVAISGSNLRIFRCCRLGETFSEHRLPL 765

Query: 777  RYTPRRFVLQPKKK--------LMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
             YTPR+ V+ P +         ++ ++E+D  A   E      K           G+  +
Sbjct: 766  DYTPRKLVMMPNEAPNVGGLNYMVAVVESDHNAYGPENVAEISKAL---------GDIKL 816

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
            D  E GD      PL++      KA + +W SC+R+++P +  T   L  + NEAA +  
Sbjct: 817  DN-EVGD----LLPLANY-----KAGTGRWASCVRIVNPLNLTTAAKLLFETNEAATAAA 866

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE--LLHKTQVEGIP 946
             V     +    L +GT  G       + V  YI +Y +   G + E  LLH T+V G+ 
Sbjct: 867  VVVLDGMQ---CLCIGTTVGYDL-KNTDDVESYIRVYCY---GANFEIRLLHVTRVGGVV 919

Query: 947  LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNT-IVSINTYRDRIYVGDIQES 1005
             A   ++GRLLA +G  +RLY LGKK+LL K E++   +   + +N    RI+ GDI+E 
Sbjct: 920  RAFTGYEGRLLASVGKRIRLYALGKKQLLLKAEHRTCSDHGFIWLNAVGSRIFAGDIREG 979

Query: 1006 FHFCK---YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
                +   Y  +  +       + PRWLT+   +D+ T+   DKF +I+  R+PQ+ S  
Sbjct: 980  IQILRIKFYSEEAAEFEWVGGATGPRWLTSCAQLDYSTVIAGDKFDSIFVTRVPQEESTR 1039

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGS 1122
                                  ++E + QFH+GD+ T++ KA+L       V+YGTVMGS
Sbjct: 1040 --------------------HIQLENVCQFHLGDLPTAMDKAAL-SQSTHVVLYGTVMGS 1078

Query: 1123 LGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL 1182
            +GA++ F S+D++DF  HLEM M  E PPLCGR+H  YRS Y PV+ V+DGDLCEQF  L
Sbjct: 1079 IGALVPFQSKDELDFLQHLEMLMATEAPPLCGREHSFYRSYYVPVQQVVDGDLCEQFRHL 1138

Query: 1183 SLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            +   QRK+A +LD T   +L+KL++I+N+I+
Sbjct: 1139 TEAQQRKVAQQLDTTVNNVLRKLDDIKNRIM 1169


>gi|189208368|ref|XP_001940517.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
            Pt-1C-BFP]
 gi|187976610|gb|EDU43236.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
            Pt-1C-BFP]
          Length = 1247

 Score =  927 bits (2395), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/1254 (40%), Positives = 744/1254 (59%), Gaps = 55/1254 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGR-IETLVSTEIFG 59
            M LY+LT++QPT    AI+G+F GT   +I+ A G  L +L      +  + L S ++FG
Sbjct: 1    MSLYALTVKQPTATQDAISGDFLGTGKQQILTASGSRLAILEVSRRQKGFQELYSQDVFG 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR +A+FR+ G  KD+IV+ +DSGR+V  EY P +  F  +H ETFGKSG RR+VPG+Y
Sbjct: 61   IIRGIAKFRIAGGTKDHIVITTDSGRLVTYEYLPDEKTFKTVHFETFGKSGIRRVVPGEY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA+MI + EK KLVY+L R     + ISSPLEAHK  T+VY + G+D G+DNP
Sbjct: 121  LAADPKGRAIMIASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA +E+DYS ++ D TG+A  E +K L +YELDLGLNH+ RKWSEPVD  AN L  VPG
Sbjct: 181  MFATLEVDYSSSETDPTGEAYDEIKKELVYYELDLGLNHIVRKWSEPVDRTANTLFRVPG 240

Query: 240  GGDGPSGVLVCAENFVIYK---NQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKT 293
            G + PSGVL C E+ + Y+   N      R  IPRR    + P  + ++I       +  
Sbjct: 241  GPNAPSGVLCCGEDSITYRRIFNNKSNVHRLAIPRREGATEDPNRKRMIIAGTLYSLKGG 300

Query: 294  LFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
             FF+LLQTE GD+FK+T++  +  V ++KIKYFDTIP+  S+C+L++G+++AA E G+  
Sbjct: 301  DFFYLLQTEDGDVFKLTVDAPSGTVEKIKIKYFDTIPIVTSICILRAGFVYAACESGDRI 360

Query: 354  LYQFQAIGADPD--VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
            LY+ +++G + D  V  S    ++ +  F P FF+PR L N   +E + SL PIM M +A
Sbjct: 361  LYELESLGDETDDPVFESDQFPVDPDTSFAPPFFKPRALVNFTPVESMPSLNPIMGMEVA 420

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            N   E+APQ++T+ G   RSS R  R  L V ++  S LP   S VWT K    DE D  
Sbjct: 421  NPALEDAPQVYTINGTSGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTSGDEADTL 480

Query: 472  IVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR----- 526
            IV+  ++ TLVL IG+ VEE S++GFL  T +L V   G+D ++Q+HP GIRHI+     
Sbjct: 481  IVLCLHSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQFP 540

Query: 527  ------EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-E 579
                      + +W  P  RTIV   +N  QV IALS G+++YFE D  G L   E+   
Sbjct: 541  NDDADATHANLMDWHPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAEEEIS 600

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPD---DCMQILSVQSVSSPPES 636
            +   + CL +  VPEG  R+ FLAVG  D T+RI +L PD   + ++ +SVQ+++SPP  
Sbjct: 601  LDSTINCLAMPDVPEGSVRAFFLAVGCSDQTVRIFNLSPDMDGNILRSISVQALTSPPSD 660

Query: 637  LL--FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
            L   F++ ++  G         S FL+ GL++GV  R+V+D +TG + D+R RFLG  P 
Sbjct: 661  LTINFMKDRSPRG--------ESQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPI 712

Query: 695  KLFSVV-VGGRAAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVS 751
            K   V  V G   +L ++SRPWLGY H   G   LTPL+Y   + A +F   Q  +G++ 
Sbjct: 713  KFAKVNDVAGSPGILAMTSRPWLGYTHPRTGVLQLTPLNYIPFKSAWNFDGSQ-FKGIIC 771

Query: 752  VAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREA-- 809
            V+ N LR+FT   L +      + L+YTPR+ V   ++ +  +I++D   ++A+ R+   
Sbjct: 772  VSTNELRIFTFNDLTDNTTYENISLKYTPRKMVGYHEQGVFYVIQSDNNTISADRRQQLI 831

Query: 810  AKKECFEAAGMGE--NGNGNMDQMENGDDENKYDPLSDE----QYGYPKAESDKWVSCIR 863
            A+    E + + +  + NG M+ +E   D       S+E     +GYP+AE   W SCI+
Sbjct: 832  AQGNTKEDSNVEQENDTNGGMELVETNGDAADGSTESEEFPAIDFGYPRAEG-SWASCIQ 890

Query: 864  VLDPRSANTTC-LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYI 922
            V+DP +       +E+  N++  S   V F  + +   LAVG AK L F P +   +  I
Sbjct: 891  VVDPVTEKAVVHTVEINGNQSLVSAALVFFESRGNEAFLAVGLAKDLSFQPFK-FSSASI 949

Query: 923  HIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN-K 981
             +Y+   +G+ +EL ++T V   PLAL  F+G+L+AG+G  L LYD G K LLRK +   
Sbjct: 950  QVYKISPDGREIELFNETAVSEPPLALLAFKGKLIAGVGRHLCLYDCGMKSLLRKAQAPN 1009

Query: 982  LFPNTIVSINTYRDRIYVGDIQESFHFCKYRRD--ENQLYIFADDSVPRWLTAAHHIDFD 1039
              P  IV I T   R+ V D  +S  +  ++     N+L  F DDSV R  +A+  +D+D
Sbjct: 1010 SVPTRIVDIKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSVARHTSASEMLDYD 1069

Query: 1040 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVT 1099
            T  G DKFGNI+ VR P+++S+  +E P G  +  ++  L G PN+++ I  +   D+  
Sbjct: 1070 TTIGGDKFGNIWLVRCPKEISESSDESPDGSDLLVDKSYLGGTPNRLDLIAHYFTNDIPV 1129

Query: 1100 SLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMA 1159
            S+QKA+L+ GG + + +  + G+LGA++ F+SR     F  LE+ +R E  PL GRDH+ 
Sbjct: 1130 SIQKANLISGGDKVIFWAGLQGTLGALIPFTSRRTHKLFQQLELTLRSEDKPLSGRDHLT 1189

Query: 1160 YRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADEL---DRTPGEILKKLEEIRN 1210
            YRS Y PVK VIDGDL E++  LS D +  IA ++   + TP  I +++  +R+
Sbjct: 1190 YRSYYAPVKSVIDGDLIERYLVLSSDKRESIAGQMTGSEWTPSSIDEQIWGMRS 1243


>gi|444722328|gb|ELW63026.1| Splicing factor 3B subunit 3 [Tupaia chinensis]
          Length = 840

 Score =  926 bits (2393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/929 (51%), Positives = 624/929 (67%), Gaps = 103/929 (11%)

Query: 294  LFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
            +FFFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH 
Sbjct: 1    MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 60

Query: 354  LYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANL 413
            LYQ   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+       
Sbjct: 61   LYQIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPIL------- 111

Query: 414  FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIV 473
                       C                VSEMAVS+LPG P+AVWTV++++ DEFDAYI+
Sbjct: 112  ----------FC---------------QVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 146

Query: 474  VSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINE 533
            VSF NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NE
Sbjct: 147  VSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNE 206

Query: 534  WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASV 592
            W+TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+V
Sbjct: 207  WKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANV 266

Query: 593  PEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGA 652
            P G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E+    GG +  
Sbjct: 267  PPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEM----GGTEKQ 322

Query: 653  DHPAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
            D          L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP KLF V + G+ A
Sbjct: 323  DELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 382

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
            +L +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG
Sbjct: 383  VLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLG 442

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGE 822
              FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E
Sbjct: 443  AVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDE 502

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
                  +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NE
Sbjct: 503  RELA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNE 557

Query: 883  AAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
            AAFS+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT V
Sbjct: 558  AAFSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPV 616

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDI 1002
            E +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+
Sbjct: 617  EEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDV 676

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
            QESF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE
Sbjct: 677  QESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDE 736

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGS 1122
            ++EDPTG K  W++G LNGA  K                                     
Sbjct: 737  VDEDPTGNKALWDRGLLNGASQK------------------------------------- 759

Query: 1123 LGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL 1182
                       D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++
Sbjct: 760  -----------DHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSM 808

Query: 1183 SLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 809  EPNKQKNVSEELDRTPPEVSKKLEDIRTR 837


>gi|169599248|ref|XP_001793047.1| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
 gi|160704565|gb|EAT90655.2| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
          Length = 1246

 Score =  920 bits (2378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/1247 (40%), Positives = 734/1247 (58%), Gaps = 50/1247 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGR-IETLVSTEIFG 59
            M LY+LT++QPT    A+ G+F G    +I+ A G  L +L      +    + S ++FG
Sbjct: 7    MSLYALTVKQPTSTQDALTGDFIGNGKQQILTASGSRLAILEVSRRQKGFNEVYSQDVFG 66

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IR +A+FR+ G  KD+IV+ +DSGR+V  EY   +  F  +H ET+GKSG RR+VPG+Y
Sbjct: 67   IIRRIAKFRIAGGTKDHIVITTDSGRLVTYEYVADEQTFKTVHFETYGKSGIRRVVPGEY 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            LA DPKGRA+MI + EK KLVY+L R     + ISSPLEAHK  T+VY++ G+D G+DNP
Sbjct: 127  LAADPKGRAIMIASIEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYTLIGLDVGYDNP 186

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA++ELD+S ++ D TG+A  E +K L +YELDLGLNH+ RKWSEPVD  AN L  VPG
Sbjct: 187  MFASLELDFSSSETDPTGEAFDELKKELVYYELDLGLNHIVRKWSEPVDRTANALYRVPG 246

Query: 240  GGDGPSGVLVCAENFVIYK---NQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKT 293
            G + PSGVL C  + + Y+   N      R  IPRR    + P  +  ++       +  
Sbjct: 247  GPNAPSGVLCCGLDNITYRRIFNTNSNVHRLAIPRREGATEDPNRKRSIVAGTLYSLKGG 306

Query: 294  LFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
             FF+LLQT+ GD+FK+T++  +  V  +KIKYFDTIPV  S+C+L++G+++AA E G+  
Sbjct: 307  DFFYLLQTDDGDVFKLTVDAPSGTVERIKIKYFDTIPVATSICILRAGFVYAACESGDRI 366

Query: 354  LYQFQAIGADPD--VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
            LY+ +++G + D  +  S    ++ E  F P FF+PR L NL  +E + SL PIM M IA
Sbjct: 367  LYELESLGDETDDPMFESGQFPVDPEAVFAPPFFKPRALTNLTAVETMPSLNPIMGMEIA 426

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            N   E+APQI+T+ G G RS+ R  R  L V ++  S LP   S VWT K  + DE D  
Sbjct: 427  NPMLEDAPQIYTINGAGGRSTFRTTRNALEVLDLIESPLPQNASDVWTTKLTLEDETDTL 486

Query: 472  IVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR----- 526
            IV+  ++ TLVL IGE VEE S++GF+  T +L V   G+D ++QVHP GIRHI+     
Sbjct: 487  IVLCLHSRTLVLKIGEDVEEASNTGFMADTNTLGVQQFGEDCIIQVHPKGIRHIQGIQFP 546

Query: 527  EDGRI------NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-E 579
            EDG +       +W+ P  RTIV   +N  QV IALS G+++YFE D  G L   E+   
Sbjct: 547  EDGAVATHTSLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDADGSLAMAEEEIA 606

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPD---DCMQILSVQSVSSPPES 636
            +   + CL I  VPEG  R+ F+AVG  D T+RI +L PD   + ++ +SVQ+++SPP  
Sbjct: 607  LDSTINCLAIPDVPEGSVRAFFMAVGCSDQTVRIFNLSPDMEGNILRSISVQALTSPPSG 666

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            L    +       D +    S FL+ GL++GV  R+V+D +TG + D+R RFLG  P K 
Sbjct: 667  LTINMMS------DKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKF 720

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
              V V G  A+L ++SRPWLGY H   G   LTPL+Y   + A +F   Q  +G++ V+ 
Sbjct: 721  AKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYIAFKSAWNFEGSQ-FKGIICVSA 779

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
            N LR+FT   L +      + L+YTPR+ V   ++ +  +I+++   L+A+ R+   K  
Sbjct: 780  NELRIFTFNDLTDNTTYETIQLKYTPRKMVGYHEQGVFYVIQSENNTLSADTRQ---KLI 836

Query: 815  FEAAGMGENGNGNMDQME--NGDDEN---KYDPLSDEQYGYPKAESDKWVSCIRVLDPRS 869
             EA    E+ +    ++E  NG+  N     D L    +GYP+A+ + W SCI+V+DP +
Sbjct: 837  AEADTKQEDEDDAPMEIEGANGETTNGRATSDELPPTAFGYPRAQGN-WASCIQVVDPVT 895

Query: 870  ANT-TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV 928
                T  +E+  N++  S   V F  + +   LAVGTAK L F P     A  I +Y+  
Sbjct: 896  EKAVTHTVEINANQSLVSAALVYFESRGNDAFLAVGTAKDLSFQPYHYSSAS-IQVYKIS 954

Query: 929  EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCE-NKLFPNTI 987
             +G+ LE  H+T+V   P AL  F+G+++AG+G  L LYD G + +LRK +     P  I
Sbjct: 955  PDGRELEFFHETEVTEPPTALLAFKGKMVAGVGRNLALYDCGMRSVLRKAQATNCVPTRI 1014

Query: 988  VSINTYRDRIYVGDIQESFHFCKYRRD--ENQLYIFADDSVPRWLTAAHHIDFDTMAGAD 1045
            V + T   R+ V D  +S  +  ++     N++  F DD++ R  T    +D+DT  G D
Sbjct: 1015 VDLKTQGSRLVVSDSVQSVTYVVHKDQIHPNRMIPFIDDTIQRHTTCTEMLDYDTTVGGD 1074

Query: 1046 KFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKAS 1105
            KFGN++ VR PQ VS+  +E P G  I  ++  L G  N+++ +  +   D+  S+QK  
Sbjct: 1075 KFGNLWLVRCPQKVSESSDESPDGSDILVDKSYLGGTANRLDSVAHYFANDIPISIQKTH 1134

Query: 1106 LVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF 1165
            L+ G    + +  + G+LGA++ F+SR     F  LE+ +R +  P+ GRDH+A+RS + 
Sbjct: 1135 LLSGAERIIFWAGLQGTLGALIPFNSRRQHKMFQQLELQLRSDDKPMSGRDHLAFRSYFN 1194

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADEL---DRTPGEILKKLEEIR 1209
            PVK VIDGDL E+F  LS D +  I  +L   + TPG I + +  +R
Sbjct: 1195 PVKSVIDGDLIERFLVLSRDKRESIVGQLTGAEWTPGMIDEAIWNMR 1241


>gi|320037168|gb|EFW19106.1| pre-mRNA-splicing factor rse1 [Coccidioides posadasii str. Silveira]
          Length = 970

 Score =  914 bits (2363), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/995 (47%), Positives = 643/995 (64%), Gaps = 42/995 (4%)

Query: 233  MLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHR 290
            ML  VPGG DGPSGVLVC+E  + Y++      R  IPRR+      ER   I +   H+
Sbjct: 1    MLFQVPGGADGPSGVLVCSEGNITYRHSNQDAFRVPIPRRSGPTENPERKRYITAGVVHK 60

Query: 291  QKTLFFFLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSGYL 343
             +  FF LLQTE GD+FKVT+   E +N      V  LK+KYFDT+PV +S+C+LK+G+L
Sbjct: 61   MRRAFFCLLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCILKNGFL 120

Query: 344  FAASEFGNHALYQFQAIGAD-PDVEASSSTL-METEEGFQPVFFQPRGLKNLVRIEQVES 401
            F ASE GNH  YQF+ +G D  + E SS     +  E   PV+F+PR  +NL  +E + S
Sbjct: 121  FVASETGNHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLVESINS 180

Query: 402  LMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK 461
            L P+M  +I NL E++APQ +TL G G RS+ R L+ GL VSE+  S+LP VPSAVWT K
Sbjct: 181  LNPLMSCKITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTK 240

Query: 462  KNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSG 521
               ND++DAYI++SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP G
Sbjct: 241  LTRNDQYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKG 300

Query: 522  IRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEM 580
            IRHI  D R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EM
Sbjct: 301  IRHIHADRRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREM 360

Query: 581  SGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFL 640
            SG V CL +  +P GR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  +
Sbjct: 361  SGTVTCLSLGEIPPGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIM 420

Query: 641  EVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVV 700
             +  S  G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLGL+  KLFSV 
Sbjct: 421  SMVDSTSGG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKSVKLFSVS 474

Query: 701  VGGRAAMLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
            V  + A+L LSSRPWLGY  +    F+LTPL Y  LE++ +FSS+QCVEG+V + G  LR
Sbjct: 475  VKEQRAVLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLR 534

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAA 818
            +F+IE+L     +  +PL YTPR FV  P++ L  +IE D   L+   +    ++   A 
Sbjct: 535  IFSIEKLDNNLLQETIPLAYTPRHFVRHPEQPLFYVIEADNNILSPSTKAKLLQDSKAA- 593

Query: 819  GMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLLE 877
                  NG + +            L  E +GYP+  +  W SCI+V+DP  S      +E
Sbjct: 594  ------NGEVAE------------LPPEDFGYPRG-TGHWASCIQVVDPINSKAVISRIE 634

Query: 878  LQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELL 937
            L++NEAA S+  V F  ++  T L VGT K +  +P  +   G+IHIYRF E+GK LE +
Sbjct: 635  LEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVYPPSS-SCGFIHIYRFQEDGKELEFI 693

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRI 997
            HKT+VE  P AL  FQGRLLAGIG  LR+YDLG K+LLRKC+ ++ P  IV + T   RI
Sbjct: 694  HKTKVESPPHALLAFQGRLLAGIGRNLRIYDLGMKQLLRKCQAEVVPRLIVGLQTQGSRI 753

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             V D+QES  +  Y+  EN+L  FADD + RW T    +D++T+AG DKFGN++ +R PQ
Sbjct: 754  IVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFGNLWLLRCPQ 813

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYG 1117
              S+E +ED +G  +  E+  L GAPN++  +V F+  D+ TS+QK  LV GG + +++ 
Sbjct: 814  KASEEADEDGSGAHLIHERQYLQGAPNRLSLMVHFYPQDIPTSIQKTQLVAGGRDILVWT 873

Query: 1118 TVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCE 1177
             + G++G ++ F SR+DVDFF  LEM +  + PPL GRDH+ YRS Y P K  IDGDLCE
Sbjct: 874  GLQGTVGMLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDHLIYRSYYAPAKGTIDGDLCE 933

Query: 1178 QFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             + TL  D +  IA ELDR+  EI +K+ ++R K+
Sbjct: 934  TYFTLPNDKKLMIAGELDRSVREIERKISDMRTKV 968


>gi|335310432|ref|XP_003362030.1| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
          Length = 701

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/677 (64%), Positives = 543/677 (80%), Gaps = 20/677 (2%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1   MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61  VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121 LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+S+ +    + L+TVPG
Sbjct: 181 MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSQIIAE-FHFLLTVPG 239

Query: 240 GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
           G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 240 GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 298

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGNH LY
Sbjct: 299 FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLY 358

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
           Q   +G D D E   S+ M  EEG    FFQPR LKNLV +++++SL PI+  +IA+L  
Sbjct: 359 QIAHLGDD-DEEPEFSSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLSPILFCQIADLAN 416

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
           E+ PQ++  CGRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV++++ DEFDAYI+VS
Sbjct: 417 EDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVS 476

Query: 476 FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
           F NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+QV+P GIRHIR D R+NEW+
Sbjct: 477 FVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWK 536

Query: 536 TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPE 594
           TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  E+ EMS DV C+ +A+VP 
Sbjct: 537 TPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPP 596

Query: 595 GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
           G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  +E    +GG +  D 
Sbjct: 597 GEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVE----MGGTEKQDE 652

Query: 655 PAS------LFLNAGLQ 665
                    L+LN GLQ
Sbjct: 653 LGERGSIGFLYLNIGLQ 669


>gi|378730761|gb|EHY57220.1| pre-mRNA-splicing factor rse1, variant [Exophiala dermatitidis
            NIH/UT8656]
          Length = 914

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/939 (47%), Positives = 606/939 (64%), Gaps = 43/939 (4%)

Query: 289  HRQKTLFFFLLQTEYGDIFKVTL---EHDNEH----VSELKIKYFDTIPVTASMCVLKSG 341
            H+ K  FF LLQTE GD+FKVT+   E DN      V  LKIKYFDT+PV  S+ +LKSG
Sbjct: 2    HKMKGQFFLLLQTEDGDLFKVTIDMVEDDNGQLTGEVRALKIKYFDTVPVANSLHILKSG 61

Query: 342  YLFAASEFGNHALYQFQAIGADPDVE--ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQV 399
            +LF ASE GNH  YQF+ +G D +     S     +    + P FF  R L NL  ++ V
Sbjct: 62   FLFVASESGNHHFYQFEKLGDDDEETEFTSDDYPADPTAAYTPAFFHVRPLSNLNLVQSV 121

Query: 400  ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
            ++  P++D ++ANL +E+APQI+++CG G RSS + L+ GL+VSE+  S+LP  P AVWT
Sbjct: 122  DAANPLLDCKVANLLDEDAPQIYSICGAGARSSFKTLKHGLSVSEIVESELPDKPEAVWT 181

Query: 460  VKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP 519
             K   +D++DAYI++SF   TLVLSIGETVEEV+D+GFL T P+LAV  +G+D+L+QVHP
Sbjct: 182  TKLTRDDQYDAYIILSFRTGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDALVQVHP 241

Query: 520  SGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKH 578
             GIRHIR D R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  E+ 
Sbjct: 242  KGIRHIRADKRVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDERR 301

Query: 579  EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLL 638
            EM+G V CL +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L 
Sbjct: 302  EMTGTVTCLSLGDVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALS 361

Query: 639  FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
             + +  S  G        +++L+ GL +GV  RTV+D +TG+LSD+R+RFLGLRP KLF 
Sbjct: 362  IMAMADSTSGG------TTMYLHIGLYSGVYLRTVLDEITGELSDTRTRFLGLRPAKLFR 415

Query: 699  VVVGGRAAMLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
            V V G+ A++ LSSRPWLGY       F+LTPL Y  L+Y  +F+S+QC EG+V + G  
Sbjct: 416  VSVKGQNAVMALSSRPWLGYTDTQTNGFMLTPLDYVPLQYVWNFTSEQCPEGMVGIQGQN 475

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFE 816
            LR+F+IE L     +  +PL YTPR+FV  P + L  +IE D   L    R+    E   
Sbjct: 476  LRIFSIEDLSRNLLQENIPLPYTPRKFVKHPDQPLFYVIEADNNVLAPATRQKLLNE--- 532

Query: 817  AAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL- 875
                  NG+  +              L  E++GYPKA +  W SCI+V+DP +  +    
Sbjct: 533  --STAVNGDAVI--------------LPPEEFGYPKA-TGHWASCIQVVDPVNTKSVVFT 575

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            LEL+DNE A SI T  F  ++    L VGTAK L   P R+  AG++H+YRF E+GK LE
Sbjct: 576  LELEDNECATSITTAPFASQDDEVFLIVGTAKDLVVSP-RSFSAGFLHVYRFHEDGKELE 634

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
             +HKT+VE  P AL  FQGRLLAG+GP LR+YDLG K++LRKC+    PN IV + T   
Sbjct: 635  FIHKTKVEQPPTALLAFQGRLLAGVGPDLRIYDLGMKQMLRKCQVTT-PNLIVGLQTQGS 693

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            RI V DIQES  +C Y+  EN+L  F DD + RW T    +D++T+AG DKFGN++ +R 
Sbjct: 694  RIIVSDIQESVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGDKFGNLWMLRC 753

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
            PQ VS+E +ED +G  +  E+G LNG PN++  ++ +  GD+ TS+QK +LV GG + V 
Sbjct: 754  PQKVSEEADEDNSGVHLLHERGYLNGTPNRLSLMIHYFPGDIPTSIQKTNLVAGGRDVVF 813

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQE--HPPLCGRDHMAYRSAYFPVKDVIDG 1173
            +    G+LG ++ F SR+DVDFF  LEM +     +PPL GRDH+ YRS Y P K VIDG
Sbjct: 814  WTGFQGTLGILVPFVSREDVDFFQSLEMQLASSNGNPPLLGRDHLIYRSYYAPSKGVIDG 873

Query: 1174 DLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            DLCE F  L  D +  IA ELDR+  EI +K+ ++R ++
Sbjct: 874  DLCETFFLLPNDKKLMIAGELDRSVREIERKISDMRTRV 912


>gi|219110831|ref|XP_002177167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411702|gb|EEC51630.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1303

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/1290 (39%), Positives = 752/1290 (58%), Gaps = 91/1290 (7%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVAR-GKVLELLR----------------- 42
            M L  + LQ  T I+ ++ G F+     EI   + G ++E+ R                 
Sbjct: 28   MKLLDVRLQPATAILTSVTGEFTDVGRHEIAALKAGGMIEIYRIVTVVTEDADGEDDASN 87

Query: 43   PENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH 102
              +   I+ ++  E    +RS A  R  G ++D + V +DSG + IL++  S      +H
Sbjct: 88   ATSKTVIKLILRVETRSVLRSCAVVRFPGEKRDVLAVTADSGALSILDFLNSTCKI--LH 145

Query: 103  QETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNR---DTAARLTISSPLEA 159
               FGK+ CRR  PGQY+A DPKGRAV++ A EK+KLVYVLN    + AA   ++SPLEA
Sbjct: 146  CAVFGKTACRRATPGQYVASDPKGRAVLVAATEKRKLVYVLNNRSAENAATSLVASPLEA 205

Query: 160  HKSHTIVYSICGIDCGFDNPIFAAIELDYSEA-DQDSTGQAASEAQKNLTFYELDLGLNH 218
            H++ TI + + GID G+DNPIFAA+EL Y E  D  +T   AS  +K L +YELDLGLNH
Sbjct: 206  HRARTITFDVVGIDNGYDNPIFAALELQYPEQEDAAATTWTASAVEKQLAYYELDLGLNH 265

Query: 219  VSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP-------DVRAVIPR 271
            VSR+W+      A  L  +PGG DGP GVLV  E++V Y ++          ++   IPR
Sbjct: 266  VSRRWATTTHRSACCLAALPGGADGPGGVLVGGEDWVEYVHEAASTSSNHIRNLACSIPR 325

Query: 272  RADLPAERGVLIVSAATHRQK-TLFFFLLQTEYGDIFKVTL---EHDNEHVSELKIKYFD 327
            R   P+++G+LI S   HRQK + FF L Q+E GD++K+ +   E D   V  ++I   D
Sbjct: 326  RELHPSDKGILITSIVVHRQKKSKFFALAQSELGDVYKIIVQLNEPDKTKVVGMEIALLD 385

Query: 328  TIPVTASMCVLKSGYLFAASEFGNHALYQFQAIG-----------ADPDVEASSSTLMET 376
            T+P   ++ V K G LFAA+ FG+H LYQF+ I            A   + AS ST++ T
Sbjct: 386  TLPNVNALNVSKLGMLFAAASFGDHHLYQFERIDLPDAPKNTSDEATKALTASGSTVLTT 445

Query: 377  EEGFQPVF-FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE-APQIFTLCGRGPRSSLR 434
                +    F P  L+NL +I  +++  P   + +  L   E +PQI+ L G GP S+LR
Sbjct: 446  ALASEIASKFVPTVLQNLRKIHSLDNPSPTTGVLVGELAGNEVSPQIYALTGSGPTSALR 505

Query: 435  ILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN---DEFDAYIVVSFNNATLVLSIGETVEE 491
            + R G +V+E+AVS+LPGVP A++T+         + D +IVVSF +ATLVLS+GETVEE
Sbjct: 506  VTRHGASVTELAVSELPGVPGAIFTIGTGNTAGGKKLDQFIVVSFADATLVLSVGETVEE 565

Query: 492  V-SDSGFLDTTPSLAVSLIGDD-SLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNR 549
            V  +SGFL  +P+LA S +G D +L QVHP G+RHI ++G+  +W  PG + I    +N 
Sbjct: 566  VGKESGFLTNSPTLACSALGSDGALCQVHPVGVRHI-QNGQAKQWHCPGLKRIECASANE 624

Query: 550  LQVVIALSGGELIYFEVD-MTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYD 608
             QV++AL+GGE+IYFE+D M+G L+E    EM  DV CLD+ ++P+GR RS F  VG  D
Sbjct: 625  SQVIVALAGGEIIYFELDPMSGNLMESATREMGADVCCLDVGTIPKGRSRSLFAVVGCRD 684

Query: 609  NTIRILSLDPDDCMQILSVQS---VSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQ 665
             T+R++SL+PD   +ILS +S   + + P S+    + A V   +      +L +  GL 
Sbjct: 685  QTVRVISLEPDK-TKILSQRSSTALKARPHSVALQMMNAGVANSNANVDDLTLII--GLD 741

Query: 666  NGVLFRTVVDMVTGQLSDSRSR-FLGLRPPKLFSVVVGGRAAMLCLSSRPWLGY--IHRG 722
            +G   R  +D +TG +  S +R FLG RP  +  + +    A L LSSRPW+       G
Sbjct: 742  DGSSLRASIDPITGSIGTSPTRRFLGARPVAVSRISLESNPATLLLSSRPWITRRDAASG 801

Query: 723  RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG------ETFNETALPL 776
            + ++ PLSY  L++  SFSSD   EG+V+ AG  LR+ +IE  G      E FN   +PL
Sbjct: 802  KHIMAPLSYAPLDHGCSFSSDAVSEGIVATAGKTLRILSIESSGMEGGDDEAFNTNKIPL 861

Query: 777  RYTPRRFVL--------QPKKKLMVIIETD---QGALTAEEREAAKKECFEAAGMGENGN 825
            RYTPR+  L        Q +K ++V++E+D    G  T  + + A     +  G  E+ N
Sbjct: 862  RYTPRQMTLMSATPSNAQERKVVLVVVESDCNEYGEKTGGKEDDAMDVDSDDEGRKEDLN 921

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAA 884
               D+ +  +   +   +     G   +    W SC+R+LDP ++ TT   +E+  NEAA
Sbjct: 922  QGDDEDDEEEKAMRRTSI----RGPVPSSPGHWGSCVRLLDPSNSCTTLDCIEMGRNEAA 977

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
                +V FH K    LLAVGT  G+   P +   + +I IYR V  G   +LLH+T V+ 
Sbjct: 978  LCCASVRFHSKGGEPLLAVGTVTGMTMHPLKQD-SSHIVIYRIVN-GDRFQLLHRTSVDD 1035

Query: 945  IP-LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
             P L+L  FQGRLL GIG  LRLY++GK++LLRK E + FP  + ++ T  +R Y+GD+ 
Sbjct: 1036 GPVLSLAHFQGRLLVGIGTTLRLYEMGKRQLLRKSELRNFPTFVKTVQTVGERAYIGDMM 1095

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            +S    +Y    N+L + A+D+ PR +     +D++T+A  DKFGNI  +RLP+  +D  
Sbjct: 1096 QSIQIVRYDVSANRLVLIANDASPRPIVCQELLDWNTVAVGDKFGNISVMRLPRG-ADTS 1154

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL 1123
              D TG +  W+  + +  P K+E + Q++VG+VVTS+ ++SLV GG ES+IY TV G +
Sbjct: 1155 AIDVTGQRALWDSSREDMIP-KLELLCQYYVGEVVTSMTRSSLVAGGAESLIYVTVSGRI 1213

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
            GA + F++R+DVDF+S LE  +R +     GRD  +YRS Y P+  V+DGDLC+ F +L 
Sbjct: 1214 GAFVPFTNRNDVDFYSQLESELRGDASRPTGRDPQSYRSYYAPMMHVVDGDLCDAFNSLG 1273

Query: 1184 LDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
             + Q KIA++LDRT GEI+KKLE+ RN ++
Sbjct: 1274 PEKQNKIAEKLDRTVGEIMKKLEDTRNALL 1303


>gi|453087531|gb|EMF15572.1| splicing factor 3B subunit 3 [Mycosphaerella populorum SO2202]
          Length = 1223

 Score =  865 bits (2235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/1244 (38%), Positives = 722/1244 (58%), Gaps = 66/1244 (5%)

Query: 3    LYSLTLQQPTGIIAAINGN-FSGTKT--PEIVVARGKVLELLRPENSG-----RIETLVS 54
             Y+LTL+ P+   AA+  N   G K    +I  ARG+ + L R   S      +I T+  
Sbjct: 10   FYALTLEAPSAPTAAVLCNVIPGLKAGDQQIFEARGQHVLLHRITESADRTERKITTVCD 69

Query: 55   TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRI 114
             ++FG +R +A FR+  +  D +V+ SDSGR+ +L+Y+  K+ F ++H ET+GKSG RR 
Sbjct: 70   QDVFGIVRGVAAFRIPATATDQLVISSDSGRVAMLQYDNEKSAFKRVHLETYGKSGVRRT 129

Query: 115  VPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC 174
            +PGQYLA DP+GR +M+ + EK K+VY+LNRD+   + ISSP EA++  ++ +++C +D 
Sbjct: 130  IPGQYLASDPRGRCIMMASVEKNKVVYMLNRDSNGTILISSPHEANQWGSLCFALCALDT 189

Query: 175  GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANML 234
            G++ PIFA +E++Y+EA+ D TG+A  + +K L +Y +D+GLNHV + WSEPVD  ANML
Sbjct: 190  GWEPPIFATLEVEYTEAEGDPTGEAYEKREKQLVYYTVDMGLNHVVKTWSEPVDYSANML 249

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK 292
              VPGG DGPSG LVC E+ + YK+     +   IPRR  A    ER   IV+   H  K
Sbjct: 250  FGVPGGQDGPSGTLVCCEDRIYYKHDKAASLCIAIPRREGATEDKERKRQIVAGCLHLAK 309

Query: 293  TL--FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYL 343
            T   FFF LQTE GD+FK+T+               ++ +KY+DT PV   M + K G+L
Sbjct: 310  TRHEFFFFLQTEDGDVFKLTITMATDAQGRQTADPEQITMKYYDTFPVARQMLLHKKGFL 369

Query: 344  FAASEFGNHALYQFQAIGADPDVE-----ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQ 398
            + A+E GN  L+    +  DPD E      S     + EE  +P +F+PR L        
Sbjct: 370  YIATEDGNSKLFHIDDLADDPDFEPHNTFTSDGVSADPEEPIEPTYFKPRELTMTHLAVD 429

Query: 399  VESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP-SAV 457
            V  L P+M  R+ NL  E+APQI+ + G+G RS  + +R GL V  +  + +  VP   +
Sbjct: 430  VPGLHPLMKTRVDNLTGEDAPQIYGIQGKGNRSQFKTIRHGLDVEVLINNSMGNVPYDNI 489

Query: 458  WTVKKNVNDEFDAYIVVSFN--NATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLM 515
            WT K    DE   Y+++S N  + T+  SIG++VE++ +S FL+   ++    +GD  L+
Sbjct: 490  WTFKHRTTDEHHRYLLLSSNYGDLTIACSIGDSVEQIENSNFLENRATVHAEQMGDAVLV 549

Query: 516  QVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV 575
            QVH  GIR I +DG++NEW TP  RT V   +N+ Q+++ LS  EL +F +     L+++
Sbjct: 550  QVHARGIRSIYQDGKLNEWNTPAHRTCVVASANQRQLLLGLSSAELCFFWMGEDEILVQL 609

Query: 576  EKH-EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPP 634
            E+  EMSG +  + + S P+GR+++++  VG  D TIR+LS++ D  ++  SVQ++S+ P
Sbjct: 610  EEMPEMSGKITAISVGSTPKGRQQAKYAVVGCDDCTIRVLSIELDSPLEARSVQALSAVP 669

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             SL  +E+       D A       ++ GLQ+G+  R ++D  TG+L D R++FLG + P
Sbjct: 670  TSLEVVEML------DPASGTTVNVVHIGLQSGLYLRAIIDETTGELGDVRTKFLGTKAP 723

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSV 752
            +L  V V     +L  S+RPW+GY H   G++ +TPL  E +E A SF S   + G+ ++
Sbjct: 724  RLCPVQVEDEECVLACSTRPWVGYNHPQTGQYTITPLIAEKMEAARSFISPD-LSGLCAI 782

Query: 753  AGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK 812
             G++L +F +  +    + +++ L  TPR     P  ++   +++D   L+   R     
Sbjct: 783  QGSSLLIFQLPSVEGRLSHSSVQLNNTPRGMARHPYYQIWYTVQSDGNTLSKATR----- 837

Query: 813  ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQY-GYPKAESDKWVSCIRVLDP--RS 869
                            DQ+     ++  + ++ E++ G P+  +  W SCI+ +DP  R 
Sbjct: 838  ----------------DQLRGSPIDDDEEAMALERHLGLPRGNT-HWASCIQAIDPINRQ 880

Query: 870  ANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNI-VAGYIHIYRFV 928
            A     +E+ DNEAA     V F  +     LAVGT  G    P   +  AGY+HI++  
Sbjct: 881  A-VVSTVEMGDNEAALCCACVAFESRNWEVFLAVGT--GQHMSPGTGLQAAGYVHIFKLE 937

Query: 929  EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIV 988
            E+G  L  +HKT+ +    AL  F GRL  G+G  L +YD+G+K LLRK   +  PN IV
Sbjct: 938  EDGTKLTFVHKTKFDQPVYALLPFHGRLALGVGNELFIYDIGQKALLRKARGQATPNQIV 997

Query: 989  SINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
            S+ ++  RI  GD+ E   +  Y+   N+L  F DD V RW T    ID++T AG DKFG
Sbjct: 998  SLESHGQRIICGDVSEGVTYMVYKPGYNRLIPFVDDVVQRWTTGTTMIDYETTAGGDKFG 1057

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP 1108
            N++ VR P+  S E +E+  GG I  E+  L GAP +++    ++  D+  SLQ+ +LV 
Sbjct: 1058 NLWVVRCPEQPSQEADEEGAGGFIMNERSYLGGAPYRLDLRAHYYCQDIPMSLQRTALVA 1117

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK 1168
            GG E + +  + G+LG ++ F +R+DV+FF+ LE  +R E PPL GRDH+ YRS Y PVK
Sbjct: 1118 GGQEVLFWSGLQGTLGMLVPFVTREDVEFFTSLEQQLRIEDPPLAGRDHLMYRSYYVPVK 1177

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             VIDGDLCE+F  LS D ++K+A E+DR+  EI KK++E+R ++
Sbjct: 1178 GVIDGDLCERFMALSYDSKQKVAAEVDRSVKEIEKKVQEMRTRV 1221


>gi|398407593|ref|XP_003855262.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
 gi|339475146|gb|EGP90238.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
          Length = 1218

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/1242 (38%), Positives = 722/1242 (58%), Gaps = 62/1242 (4%)

Query: 3    LYSLTLQQPTGIIAAINGN-FSGTKTP--EIVVARGKVLELLR-PENSGRIE----TLVS 54
             Y+LT++ P+    A+  N   G K    +I  ARG+ + L R  E++ R E    T+  
Sbjct: 5    FYALTVEAPSAPTHAVTCNAIPGLKATDQQIFEARGEHILLHRIVESADRTERSIVTVCD 64

Query: 55   TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRI 114
              +FG +R +A FR+ G+  D +VV SDSGR+ +L Y+  K  F ++H ET+GKSG RR 
Sbjct: 65   QNVFGIVRGVAAFRIPGTATDQLVVSSDSGRVTMLTYDADKQNFKRVHLETYGKSGIRRT 124

Query: 115  VPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC 174
            +PG YLA D +GR +M+ + EK K+VY+LNR     + ISSP EA++  ++ + IC +D 
Sbjct: 125  IPGHYLASDSRGRCIMLASVEKNKVVYMLNRHADGNIIISSPHEANQMGSLCFGICALDT 184

Query: 175  GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANML 234
            G+D PIFAA+E++Y+EA+ D +G A    +K L +Y +D+GLNHV + W++ VD  ANM+
Sbjct: 185  GWDAPIFAALEVEYTEAEADPSGDAFKRREKQLVYYTVDMGLNHVVKSWTDTVDYTANMI 244

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE---RGVLIVSAATHRQ 291
            + VPGG DGPSGVLVCAE+ + Y++  HP +   IPRR + P E   R   IV+   H  
Sbjct: 245  IGVPGGQDGPSGVLVCAEDRIYYRHDKHPALSITIPRR-NGPTEDSARKRTIVAYCLHLA 303

Query: 292  KTL--FFFLLQTEYGDIFKVTLEHD-------NEHVSELKIKYFDTIPVTASMCVLKSGY 342
            KT   FFF LQTE GD+FK+ ++ +           S + +KY+DT P+   M +LK GY
Sbjct: 304  KTRHEFFFFLQTEDGDVFKLNMQMELDDQGRQTARPSAIVMKYYDTFPIARQMLLLKKGY 363

Query: 343  LFAASEFGNHALYQFQAIGADPDVE-----ASSSTLMETEEGFQPVFFQPRGLKNLVRIE 397
            L+ A+E GN  L     +  DPD E      S     + ++   P +FQPR L       
Sbjct: 364  LYIATENGNSHLLHVDDLADDPDFEPHNTFTSDGVPSDPQDPTDPTYFQPRELTMTHVAC 423

Query: 398  QVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP-SA 456
             V  L P++  ++ NL  E+APQI+ + G G +S  + +R GL V E+  + +  VP   
Sbjct: 424  DVPGLHPLIKTKVDNLTSEDAPQIYAIQGTGNKSQFKTIRHGLNVEEIINNSMGNVPYDN 483

Query: 457  VWTVKKNVNDEFDAYIVVS--FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSL 514
            +WT K    DEF  Y+++S  + + T+  SIG++VE++ +S FL+   ++    +GD +L
Sbjct: 484  IWTFKHRSTDEFHRYLLLSSSYGDLTIACSIGDSVEQIENSSFLENRATVHAQQMGDATL 543

Query: 515  MQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE 574
            +QVH  GIR I E G +NEW TP  RT+V   +N  Q+++ALS  EL +F +   G L++
Sbjct: 544  VQVHARGIRSILESGALNEWPTPAHRTVVVASANERQLLLALSSAELAFFFMQDDGILVQ 603

Query: 575  VEKH-EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP 633
            +E+  EMSG V  L +   P+GR+++++  VG  D TIR+LS++ D  ++  SVQ++S+ 
Sbjct: 604  LEEMPEMSGKVTALSVGRTPKGRQQAKYAVVGCDDCTIRVLSIELDSPLEPRSVQALSAV 663

Query: 634  PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
            P SL  +E+       D + +     ++ GLQ+G+  R V+D  TG+L D R++FLG RP
Sbjct: 664  PTSLEVVEMH------DPSSNSYVNVVHIGLQSGLYLRAVIDETTGELGDVRTKFLGTRP 717

Query: 694  PKLFSVVVGGRAAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVS 751
            P+L  V +  +  +L  SSRPWLGY H    ++ +TPL  E +E A SF S   V G+ +
Sbjct: 718  PRLCPVEINDQECVLACSSRPWLGYNHPQSQQYTVTPLIAEPIEAARSFISPDLV-GLCA 776

Query: 752  VAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAK 811
            + G++L +  +  +    + + + L YTPR     P   +    + D   L+   R+  +
Sbjct: 777  IQGSSLLIMQVPSIEGRLSSSTIDLNYTPRAMDRNPLYPIWYTAQADGNTLSKAMRDQLR 836

Query: 812  KECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
             +                     DD+ +   L ++  G  +  +  W SCI+ +DP +  
Sbjct: 837  GKSI-------------------DDDEEATAL-EKHLGVSRG-TGHWASCIQAIDPITQK 875

Query: 872  T-TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEE 930
              T  +EL +NEAA  I  V F  ++    LAVGT + +     +    G++HIYR +EE
Sbjct: 876  AVTHTIELGENEAALCIACVPFTSRQDEVFLAVGTGQHMSPGTSQP-STGFVHIYRLLEE 934

Query: 931  GKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI 990
            G  LE +H+TQ +    ALC+F GRL  G+G  L +YD+G K LLRK      PN I  I
Sbjct: 935  GTKLEFVHRTQFDSPIYALCKFNGRLALGVGNELFIYDMGMKHLLRKARGTAVPNLITHI 994

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             +  +R+   D+ ES  +  Y+   N+L  F DD++ RW TA   +D++T+AGADKFGN+
Sbjct: 995  TSVGNRLICADVSESVTYVVYKPAFNRLIPFVDDTIQRWTTATALVDYETVAGADKFGNL 1054

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG 1110
            + VR P+  S E +ED  GG I  E+  L GAP ++E    F   D+ TSLQ+ SLV GG
Sbjct: 1055 WVVRCPEATSTEADEDGAGGYIMNERSYLGGAPYRLELRSHFFANDIPTSLQRTSLVAGG 1114

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDV 1170
             E + +  + G+LG ++ F SR+DV+FF+ LE  MRQE PPL GRDH+ YRS Y PVK V
Sbjct: 1115 AEVIFWSGLQGTLGMLVPFVSREDVEFFTALESQMRQEDPPLAGRDHLMYRSYYVPVKGV 1174

Query: 1171 IDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            IDGDLCE++  L  D++ KIA E+DR+  E+ KK++E+R ++
Sbjct: 1175 IDGDLCERYLGLREDVKGKIAAEVDRSVKEVEKKVQEMRGRV 1216


>gi|224004656|ref|XP_002295979.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
            associated protein [Thalassiosira pseudonana CCMP1335]
 gi|209586011|gb|ACI64696.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
            associated protein [Thalassiosira pseudonana CCMP1335]
          Length = 1212

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/1249 (39%), Positives = 735/1249 (58%), Gaps = 128/1249 (10%)

Query: 56   EIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIV 115
            E    +RS++  R++G ++D +VVGSDSG + ++++   + V   +H   FGK GCRR  
Sbjct: 1    ETRSVLRSVSAVRVSGGKRDVVVVGSDSGCLAVIDFG-EEGVGRVLHCPVFGKVGCRRDT 59

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
            PGQY+A DP+GRA MI + EK+KLVYVLNRDT+  +T++SPLEAH+  T+V+ + G+D G
Sbjct: 60   PGQYIATDPRGRATMISSIEKRKLVYVLNRDTSGNVTMASPLEAHRPRTVVFDLVGVDNG 119

Query: 176  FDNPIFAAIELDY------------SEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW 223
            +DNPIFA++E+ Y             E D    G+      K L +YELDLGLNHVSR+W
Sbjct: 120  YDNPIFASLEVQYEDYEDEDGRNGRGEEDNVPLGKLGDGFTKQLAYYELDLGLNHVSRRW 179

Query: 224  SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQG--------------HPDVRAV- 268
            +      A  L  +PGG DGPSGVLV  E+++ Y ++G               P  R + 
Sbjct: 180  ATTTHRTACCLAAIPGGADGPSGVLVGGEDYIEYLHEGMASPPIPNGAKVGKFPPKRLIC 239

Query: 269  -IPRRADLPAERGVLIVSAATHRQKT-LFFFLLQTEYGDIFKVTLEHDNEH---VSELKI 323
             IPRR   P  +G+LI      RQK   FF L Q+E GD++KVTL+   E    V  + +
Sbjct: 240  AIPRRELHPESKGILITHMTVLRQKKGKFFALAQSELGDVYKVTLQMSKEDKTIVQHMTV 299

Query: 324  KYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPV 383
               DT+PV   + + K   LF  +EFG+H LYQF AI    D+E S+      +E  +  
Sbjct: 300  CLLDTLPVGTGLNISKLALLFVPAEFGDHGLYQFDAI----DIEDSAVNASSGDENAEDA 355

Query: 384  F-------------FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE-APQIFTLCGRGP 429
            F             F+P  L+NL ++  ++SL P++ + +  L   E +PQ++ LCGRGP
Sbjct: 356  FYSTSEMAASIAPTFRPTVLRNLHKVYTLDSLAPVISVLVGELAGNEVSPQLYALCGRGP 415

Query: 430  RSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN---VNDEF-DAYIVVSFNNATLVLSI 485
             SSLR+LR GL+V+E+AVS+LPGVP AV+ V+ +    N +F D YIVVSF +ATLVLS+
Sbjct: 416  TSSLRVLRHGLSVTELAVSELPGVPGAVFNVRDDQAAKNGKFYDRYIVVSFADATLVLSV 475

Query: 486  GETVEEVS-DSGFLDTTPSLAVSLIGDDS-------LMQVHPSGIRHIREDGRINEWRTP 537
            GETVEE+  +SGFL T P+LA S +G+         ++QV+P G+RHI+  G +++W  P
Sbjct: 476  GETVEEMGKESGFLTTEPTLACSALGNGGNGEQEGGIVQVYPGGVRHIQR-GSVSQWHVP 534

Query: 538  GKRTIVKVGSNRLQVVIALSGGELIYFEVD-MTGQLLEVEKHEMSGDVACLDIASVPEGR 596
            G + I    +N  Q++IAL GGELIYFE+D ++G L+E    ++  DV  LD+ +VP+G+
Sbjct: 535  GIKKIECASANESQILIALVGGELIYFELDPLSGNLMEAATKDVGADVCSLDVGAVPKGK 594

Query: 597  KRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSV-SSPPESLLFLEVQASVGGEDGADHP 655
             RS F AVG  D+T+R+LSL P   ++  S  ++ ++ P S+       ++    G+D  
Sbjct: 595  SRSLFAAVGCRDSTVRLLSLAPGSLLEQKSSTTLGTTRPHSV-------ALSNGVGSDGA 647

Query: 656  ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSR-FLGLRPPKLFSVVVGGRAAMLCLSSRP 714
              + L+ GL +G   R  VD +TG +S S SR FLG RP  +  V++ G  + L LSSRP
Sbjct: 648  GEITLSVGLDDGSALRAGVDPITGAMSTSPSRRFLGARPVAVSRVMIEGSPSTLLLSSRP 707

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG-------- 766
            W+G   +GR  L P+SY  L++  SFS++   EG+V+ +G+ LR+ ++   G        
Sbjct: 708  WIGRAGQGRHALAPMSYAPLDHGCSFSNEAVREGIVATSGSTLRILSVGESGGNDVVLGA 767

Query: 767  ---ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGEN 823
               E FN T + LRYTPR+  L                L+A+  EA++K        G++
Sbjct: 768  EDDEAFNSTRIGLRYTPRQMCL----------------LSAKVSEASRKIVLAVKAKGDD 811

Query: 824  GNGNMDQMENGDDEN-----------------KYDPLSDEQYGYPKAESDKWVSCIRVLD 866
               +MD+  + DD N                 +  P+     G   A   +W SC+R++D
Sbjct: 812  EAMDMDEDSDEDDTNMDEKKVDGDDDDEDDTTRLTPIR----GPVPAVQGRWGSCVRLVD 867

Query: 867  PRSANTTC-LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIY 925
            P    TT   +E+  NEAA    +V FH +   +LLAVGT  G+   P R+  + ++ +Y
Sbjct: 868  PADGCTTLDCIEMNRNEAALCCASVRFHSRGGESLLAVGTVTGMTMNPLRH-SSSHVVLY 926

Query: 926  RFVEEGKSLELLHKTQVEGIP-LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP 984
            R V  G+ L+LLH+T V+  P L+L  FQGRLL G+G  +RLY++GK++LL+KCE +  P
Sbjct: 927  RVVN-GERLQLLHRTTVDDGPVLSLVHFQGRLLVGVGKTVRLYEMGKRQLLKKCELRGMP 985

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
              + ++    DR +VGD+ +S  F +Y    N+L + A D  PR +T    +D +T+A  
Sbjct: 986  TMVKTLQAAGDRAFVGDMMQSMQFIRYDSTANRLVLVAKDRNPRPITCQELLDINTVAVG 1045

Query: 1045 DKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKA 1104
            DKFGN+  +RLP+  +D    D TG +  W+  + +  P K+E +  +HVG+VVTS+ +A
Sbjct: 1046 DKFGNVTILRLPRG-ADAGAIDVTGTRALWDSARDDATP-KLETLCTYHVGEVVTSMTRA 1103

Query: 1105 SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY 1164
            SLV GG ES+IY TV G +GA + F+SRDDV+F++ LE  +R E P   GRD  +YRS Y
Sbjct: 1104 SLVAGGAESLIYVTVTGRVGAFVPFTSRDDVEFYTSLEGFLRTETPRPTGRDPQSYRSYY 1163

Query: 1165 FPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
             P+K ++DGDLC+ F  L  + ++KIA+ LDR+ GE++KKLE+ RN ++
Sbjct: 1164 APMKHIVDGDLCDAFAQLPYETKQKIAESLDRSVGEVMKKLEDTRNALL 1212


>gi|302654421|ref|XP_003019018.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
 gi|291182708|gb|EFE38373.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
          Length = 802

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/778 (55%), Positives = 557/778 (71%), Gaps = 23/778 (2%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
           M++YSLT+Q PT I  AI G FSGTK  +IV A G  L L R + S G+++TL S ++FG
Sbjct: 7   MFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPSQGKVQTLFSQDVFG 66

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRSLA FRL GS KDYI++GSDSGRI I+EY P++N F++IH ETFGKSG RR+VPGQY
Sbjct: 67  IIRSLAAFRLAGSSKDYIIIGSDSGRITIVEYVPAQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  T+V+++  +D G++NP
Sbjct: 127 LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYENP 186

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           IFAA+E++Y+E DQD TGQA  E +K L +YELDLGLNHV R+W++PVD  A+ML  VPG
Sbjct: 187 IFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRRWADPVDRTASMLFQVPG 246

Query: 240 GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFF 296
           G DGPSGVLVCAE+ ++Y++      R  IPRR    + P ER   I +   H+ +  FF
Sbjct: 247 GADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENP-ERKRCITAGVMHKMRGAFF 305

Query: 297 FLLQTEYGDIFKVTL---EHDNE----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
           FLLQ+E GD+FKVT+   E +NE     V  LK+KYFDT+P+ +S+C+LKSG+LF ASE 
Sbjct: 306 FLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365

Query: 350 GNHALYQFQAIGADPD-VEASSSTLMET-EEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
           GN   YQF+ +G D D +E  S        E   PV+F+PR  +NL  +E + SL P+M 
Sbjct: 366 GNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425

Query: 408 MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
             IAN+ EE+APQI+TLCG   RSS R L+ GL VSE+  S+LP VPSAVWT K + ND+
Sbjct: 426 ASIANITEEDAPQIYTLCGTSARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQ 485

Query: 468 FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
           FDAYIV+SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  
Sbjct: 486 FDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 545

Query: 528 DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVAC 586
           D R+NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK +MSG V C
Sbjct: 546 DQRVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTC 605

Query: 587 LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
           L +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S 
Sbjct: 606 LSLGEVPEGRGRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDST 665

Query: 647 GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLG++P KLFSV V  + A
Sbjct: 666 SGG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 719

Query: 707 MLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
           +L LSSR WLGY  +    F LTPL+Y  LE++ +FSS+QCVEG+V + G  LR  +I
Sbjct: 720 VLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRYVSI 777


>gi|452986188|gb|EME85944.1| hypothetical protein MYCFIDRAFT_59215 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1223

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/1242 (38%), Positives = 723/1242 (58%), Gaps = 62/1242 (4%)

Query: 3    LYSLTLQQPTGIIAAINGN-FSGTKT--PEIVVARGKVLELLR-----PENSGRIETLVS 54
             Y+LTL+QP+   AA+  N   G K    +I  ARG+ + L R          ++ T+  
Sbjct: 10   FYALTLEQPSAPAAAVLCNAIPGLKAGDQQIFEARGQHVMLHRIVQGVDGGDRKLVTVCD 69

Query: 55   TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRI 114
             ++FG +R +A FR+ G+  D +V+ SDSGR+ +L Y   K  F + H ET+GKSG RR 
Sbjct: 70   QDVFGIVRGVAAFRIPGTSTDQLVIASDSGRVTMLTYEHDKQKFKREHLETYGKSGVRRT 129

Query: 115  VPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC 174
            +PGQYLA D +GR +M+ + EK K+VY+LNR     + ISSP EA++  ++ ++IC +D 
Sbjct: 130  IPGQYLASDTRGRCIMLASVEKNKVVYMLNRAADGNILISSPHEANQWGSLCFAICALDT 189

Query: 175  GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANML 234
            G++ PIFAA+E++Y+EA+ D +G+A    +K L +Y +D+GLNHV + WSEPVD  ANML
Sbjct: 190  GWEPPIFAALEVEYTEAESDPSGEAYERREKQLVYYTVDMGLNHVVKTWSEPVDYSANML 249

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATH--R 290
            + VPGG +GPSGVLVC E+ + YK+     +   IPRR  A     R   IV++  H   
Sbjct: 250  IGVPGGQNGPSGVLVCCEDRIYYKHDKAASLAIPIPRRKGATEDPNRKRYIVASCLHLAA 309

Query: 291  QKTLFFFLLQTEYGDIFK--VTLEHDNE-----HVSELKIKYFDTIPVTASMCVLKSGYL 343
             +  FFFLLQTE GD+FK  +T+  D +        ++ +KY+DT P+   M + K G+L
Sbjct: 310  SRKEFFFLLQTEDGDVFKLNITMAVDAQGRQTADPEQIILKYYDTFPIAKQMLLHKKGFL 369

Query: 344  FAASEFGNHALYQFQAIGADPDVE-----ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQ 398
            + A+E GN  LY    +  D + E      S     +  E ++P +FQPR L        
Sbjct: 370  YIATENGNSQLYHVDDLADDLEFEPHNNFTSDGVSPDPAEAYEPTYFQPRELTMTHLAVD 429

Query: 399  VESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP-SAV 457
            V  L P+M  ++ NL  E+APQI+ + G G +S  + +R GL V  M  + +  VP   +
Sbjct: 430  VPGLHPLMRTKVDNLTGEDAPQIYGIQGTGNKSLFKTIRHGLDVEIMIDNNMGNVPYDGI 489

Query: 458  WTVKKNVNDEFDAYIVVS--FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLM 515
            WT K   +DE   Y+++S  + + T+  SIG++VE++ +S FL+   ++    +GD +L+
Sbjct: 490  WTFKHRSSDEHHKYLIISSSYGDLTVACSIGDSVEQIENSPFLENRATVHAQQMGDSTLV 549

Query: 516  QVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV 575
            QVH  GIR I E G  NEW TP  RT+    +N  Q+++ALS  EL +F +   G L+++
Sbjct: 550  QVHARGIRSILETGAFNEWPTPPHRTVAAASANERQLLLALSSAELAFFFMGEDGILIQL 609

Query: 576  EKH-EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPP 634
            E+  EMSG +  + +   P+GR+++++  VG  D TIR+LS++ D  ++  SVQ++S+ P
Sbjct: 610  EEMPEMSGKITAISVGQTPKGRQQAKYAVVGCEDCTIRVLSIELDSPLEARSVQALSAVP 669

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             SL  +E+       D A       ++ GL++G+  R ++D  TG+L D R++FLG +PP
Sbjct: 670  TSLEVVEML------DPASGTTVNVVHIGLRSGLYLRAIIDETTGELGDVRTKFLGTKPP 723

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSV 752
            +L  V V G   +L  SSRPWLGY H     + +TPL  E +E A SFSS + ++G+ ++
Sbjct: 724  RLCPVEVDGEDCVLACSSRPWLGYNHPQSKLYTVTPLIAEPMEAARSFSSPE-LKGLCAI 782

Query: 753  AGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK 812
             G++L +F+I  +    + +++ L+YTPR     P   L  + +++   L+   R+  + 
Sbjct: 783  QGSSLLIFSIPSIEGRLSHSSVSLQYTPRSMTRNPWYPLWYVAQSEGNTLSQATRDQLRG 842

Query: 813  ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSA-N 871
            +                     DDE K     +   G P+     W SCI+ +DP     
Sbjct: 843  KSI-----------------GDDDEAK---AMERHLGLPRGNG-HWASCIQAVDPIGGRE 881

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNI-VAGYIHIYRFVEE 930
             TC +EL +NEAA S   V F  K     LAVGT + +Q  P   +  AGY+HIY+ +++
Sbjct: 882  VTCTIELGENEAALSCACVAFESKNWEVYLAVGTGQHMQ--PGTGVQTAGYVHIYKLLKD 939

Query: 931  GKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI 990
            G  LE +HKT+ E    AL  F+GRL  G+G  L +YD+G K LLRK  N   PN IVS+
Sbjct: 940  GAELEFVHKTKFELPVYALMPFRGRLALGVGNELFIYDMGMKALLRKARNIAVPNQIVSL 999

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             +  +RI  GD+ E   +  Y+   N+L  F DD+V RW T    +D++T AG DKFGN+
Sbjct: 1000 ESQGNRIICGDVSEGVTYLVYKPTFNRLIPFVDDTVQRWTTTTTMVDYETAAGGDKFGNL 1059

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG 1110
            + VR P+  S E +E+  GG I  E+  LNGAP +++    +   D+  S+Q+ +LV GG
Sbjct: 1060 WIVRCPEQPSQEADEEGAGGYIMNERSYLNGAPYRLDLRAHYFCQDIPMSMQRTALVAGG 1119

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDV 1170
             E + +  + G+LG ++ F +R+DV+FF+ LE  MR E PPL GRDH+ YRS Y PVK V
Sbjct: 1120 QEVLFWSGLQGTLGILIPFVTREDVEFFTALEQQMRTEDPPLAGRDHLMYRSYYVPVKGV 1179

Query: 1171 IDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            IDGDL E+F  LS D ++KIA E+DR+  EI KK++E+R ++
Sbjct: 1180 IDGDLLERFMGLSYDTKQKIAAEVDRSVKEIEKKVQEMRTRV 1221


>gi|361131929|gb|EHL03544.1| putative Pre-mRNA-splicing factor rse1 [Glarea lozoyensis 74030]
          Length = 967

 Score =  849 bits (2193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/1049 (43%), Positives = 638/1049 (60%), Gaps = 107/1049 (10%)

Query: 184  IELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDG 243
            +E+DY ++DQD TGQA  E +K L +YELDLGLNHV RKW++ VD  A++L  VPGG DG
Sbjct: 2    LEVDYGDSDQDPTGQAYEEIEKTLVYYELDLGLNHVVRKWADAVDRTASVLFQVPGGTDG 61

Query: 244  PSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQKTL---FFFL 298
            PSGVLVC ++ + Y++      R  IPRR  A    +R   IV+   H+ K     FFFL
Sbjct: 62   PSGVLVCGDDNITYRHSNQEAFRVAIPRRRGATEDPQRKRSIVAGVMHKLKGAAGAFFFL 121

Query: 299  LQTEYGDIFKVTLE--HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            LQTE GD+FK+T+E   D++      V  LKIKYFDT+PV +S+C+LKSG+LF ASEFG+
Sbjct: 122  LQTEDGDLFKITIEMVEDDQGQPTGEVKRLKIKYFDTVPVASSLCILKSGFLFVASEFGD 181

Query: 352  HALYQFQAIGADPDVEASSSTLMETE--EGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR 409
            H  YQF+ +G D +     S    T+  E + PV+F PR  +NL  +E ++S+ P+MD +
Sbjct: 182  HQFYQFEKLGDDDEETEFVSDDFPTDPTEPYTPVYFHPRQAENLSLVESIDSMNPLMDCK 241

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
            +ANL   +APQI+++CG G RS+ R L+ GL VSE+  S+LPGVPSAVWT K    D +D
Sbjct: 242  VANLTNADAPQIYSICGTGARSTFRSLKHGLEVSEIVESELPGVPSAVWTTKLTQGDTYD 301

Query: 470  AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG 529
            AYI++SF+N TLVLSIGETVEEV+D+GFL T  +LAV  +G+D L+QVHP GIRHIR D 
Sbjct: 302  AYIILSFSNGTLVLSIGETVEEVTDTGFLSTASTLAVQQLGEDGLIQVHPKGIRHIRADR 361

Query: 530  RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACLD 588
            R+NEW  P  R+IV   +N  QV +ALS GE++YFE+D  G L E  EK EMSG V CL 
Sbjct: 362  RVNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGTVTCLS 421

Query: 589  IASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGG 648
            +  VPEGR RS +LAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S  G
Sbjct: 422  LGDVPEGRVRSPYLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSSSG 481

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                   ++L+L+ GL +GV  RTV+D VTG+L+D+R RFLG +P KLF V V G+ A+L
Sbjct: 482  G------STLYLHIGLYSGVYLRTVLDEVTGELTDTRLRFLGPKPAKLFKVSVQGQTAVL 535

Query: 709  CLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
             LSSRPWLGY       F+LTPL+Y  LE+  +FSS+QC EG+V + G  LR+F+IE+L 
Sbjct: 536  ALSSRPWLGYTDPVTKAFMLTPLNYPALEWGWNFSSEQCTEGMVGIQGQNLRIFSIEKLT 595

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
            +   + ++PL YTPRRFV  P++ L   IE+D   L+     A K++  E   +  NG+ 
Sbjct: 596  DNLLQESIPLTYTPRRFVRHPEQPLFYTIESDNNVLSP----ATKQKLLEDPSV-VNGDA 650

Query: 827  NMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDNEAAF 885
             +              L  E++GYP+     W SCI V+DP +       +  + NEAA 
Sbjct: 651  AV--------------LPPEEFGYPRGRG-HWASCISVVDPVTEKKVLHTIHFEGNEAAV 695

Query: 886  S---ICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
                +  + F     G LLA G  K L                R  + G   +LL K+Q 
Sbjct: 696  EEPPMALLGF----QGRLLA-GVGKDL----------------RIYDLGMK-QLLRKSQA 733

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDI 1002
            E                                      + PN IV + T   RI V D+
Sbjct: 734  E--------------------------------------VVPNLIVGLRTQGSRIIVSDV 755

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
            QES     Y+  EN+L  F DD++ RW + +  +D++T+AG DKFGN++ +R P   S+E
Sbjct: 756  QESVVMVVYKFQENRLIPFVDDTIARWTSCSTMVDYETVAGGDKFGNLWLLRCPAKASEE 815

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGS 1122
             +E+ +G  +  E+  L GAP+++  +  F+  D+  S+QK +LV GG + +++  + G+
Sbjct: 816  ADEEGSGAHLLHERQYLQGAPHRLTLMAHFYSQDIPMSIQKTNLVVGGPDCLLWAGLQGT 875

Query: 1123 LGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL 1182
            LG ++ F  R+DVDFF  LE HMR E  PL GRDH+ YRS Y PVK +IDGDLCE++  L
Sbjct: 876  LGILIPFVGREDVDFFQTLEQHMRNEDAPLAGRDHLIYRSYYVPVKGMIDGDLCERYTLL 935

Query: 1183 SLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              D ++ IA ELDR+  EI +K+ +IR +
Sbjct: 936  PTDKKQMIAGELDRSVREIERKISDIRTR 964


>gi|452845193|gb|EME47126.1| hypothetical protein DOTSEDRAFT_69180 [Dothistroma septosporum NZE10]
          Length = 1223

 Score =  845 bits (2183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/1242 (37%), Positives = 719/1242 (57%), Gaps = 62/1242 (4%)

Query: 3    LYSLTLQQPTGIIAAINGN-FSGTKTP--EIVVARGKVLELLR-PENSGRIETLVST--- 55
             Y LTL+Q +   +AI  N   G KT   +I  ARG+ + L R  EN+ R E  V+T   
Sbjct: 10   FYGLTLEQASAPTSAILCNAIPGLKTADQQIFEARGQHISLHRITENADRTERKVTTVLD 69

Query: 56   -EIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRI 114
              +FG +R +  FR+ G+  D ++V SDSGR+ ++ Y+  KN F+K+H ET+GKSG RR 
Sbjct: 70   QNVFGIVRGVTAFRIPGTSTDQLIVSSDSGRVAVVNYDAEKNRFNKVHLETYGKSGVRRT 129

Query: 115  VPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC 174
            +PGQYLA D +GR +M+ + EK K+VY++NR+    + ISSP EA++  ++ +++C +D 
Sbjct: 130  IPGQYLASDTRGRCIMLASAEKNKVVYMMNRNADGTIQISSPHEANQWGSLCFAVCALDT 189

Query: 175  GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANML 234
            G++ P+FAA+E+DY+EA+ D TG    + +K L +Y +DLGLNHV + WS+ VD  ANM+
Sbjct: 190  GWEPPVFAALEVDYTEAESDPTGTMHEKREKQLVYYTVDLGLNHVVKSWSDTVDYTANMI 249

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE--RGVLIVSAATHRQK 292
              VPGG DGPSGVLVCAE+ + Y++  +  +   IPRR     +  R   IV+   H  K
Sbjct: 250  FGVPGGQDGPSGVLVCAEDRIYYRHDKNASLSIPIPRRKGSTEDPNRKRTIVAGCLHLAK 309

Query: 293  TL--FFFLLQTEYGDIFKVTLE-------HDNEHVSELKIKYFDTIPVTASMCVLKSGYL 343
            T   FFFLLQTE GD+FK+++            +   + +KY+DT PV   M + K GYL
Sbjct: 310  TRHEFFFLLQTEDGDVFKLSMAMGEDAQGRTTSNPERIILKYYDTFPVARQMLLHKKGYL 369

Query: 344  FAASEFGNHALYQFQAIGADPDVE-----ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQ 398
            + A+E GN  L+    +  D + E      S     E  + ++P++FQPR L        
Sbjct: 370  YVATENGNSQLFHIDDLADDLEFEPHNTFTSDDISPEPGDRYEPMYFQPRELTMTHLAVD 429

Query: 399  VESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP-SAV 457
            +  L P++  ++ NL  E+APQI+ + G G +S  + +R GL V  +  + +  VP   +
Sbjct: 430  IPGLHPLLKTKVDNLTNEDAPQIYAIQGTGNKSQFKTIRHGLDVEVLINNSMGNVPYDNI 489

Query: 458  WTVKKNVNDEFDAYIVVS--FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLM 515
            WT K   +D+   Y+++S  + + T+  SIG++VE++  S FL+   ++    +GD +L+
Sbjct: 490  WTFKHRSSDDHHKYLLLSSSYGDLTIACSIGDSVEQIESSPFLENRATVHAQQMGDATLV 549

Query: 516  QVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV 575
            QVH  GIR I E G  NEW++P  RT+V   +N  Q+++ALS  EL +F +   G L ++
Sbjct: 550  QVHARGIRSILESGAHNEWQSPAHRTVVVASANERQLLLALSSAELAFFFMGDDGILNQL 609

Query: 576  EKH-EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPP 634
            E+  EMSG +  L +   P GR+++R+  VG  D TIR+LS++ D  ++  SVQ++S+ P
Sbjct: 610  EEMPEMSGKITALSVGQTPRGRQQARYAVVGCDDCTIRVLSIELDSPLEPRSVQALSAIP 669

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             SL  +E+       D A +     ++ GLQ+G+  R ++D  TG+L D R++FLG +PP
Sbjct: 670  TSLEVVEML------DPASNTIVNVVHIGLQSGLYLRAIIDETTGELGDVRTKFLGTQPP 723

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIH--RGRFLLTPLSYETLEYAASFSSDQCVEGVVSV 752
            +L  V V  +  +L  SSRPWLG+ H     + +TPL  E +  A SF S   + G+ ++
Sbjct: 724  RLCPVEVNDQDCILACSSRPWLGFNHPQNNLYTVTPLITEPINAARSFISPD-LSGLCAI 782

Query: 753  AGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK 812
             G++L +FT+  +    + + + L YTPR     P   +  I E+D  AL+   R+  + 
Sbjct: 783  QGSSLLIFTVPSIEGRLSHSTIDLNYTPRSMTRNPWYPIWYIAESDGNALSKATRDQLRG 842

Query: 813  ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT 872
            +  E                    E++     ++  G P+     W SCI+ +DP + N 
Sbjct: 843  KSIE--------------------EDEGATALEKHLGLPRG-VQHWASCIQAVDPVTKNA 881

Query: 873  TC-LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFVEE 930
                +EL +NEAA     V F  ++    LAVGT + +Q  P   + A GY+HIY+ VE+
Sbjct: 882  VVSTVELAENEAALCCTCVAFESRDWEVFLAVGTGQHMQ--PGTGVQAVGYVHIYKLVED 939

Query: 931  GKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI 990
            G  LE +HKT+ +     +  F GRL  G+G  L +YD+G K +LRK      PN IVS+
Sbjct: 940  GTKLEFVHKTKFDLPVYTVLAFNGRLALGVGNELFIYDMGIKAMLRKARGTATPNQIVSL 999

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
                +RI  GD+ E   +  Y+   N++  F DD V RW T    +D++T AG DKFGN+
Sbjct: 1000 EAQGNRIVCGDVSEGITYVVYKPKFNRMIPFVDDVVQRWTTCTTMVDYETAAGGDKFGNL 1059

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG 1110
            + VR P+  S E +E+  GG I  E+  LNGAP +++    +   D+ TS+Q+ +LV GG
Sbjct: 1060 WVVRCPEQPSQEADEEGAGGFIMNERSYLNGAPYRLDLRAHYFCQDIPTSMQRTALVAGG 1119

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDV 1170
             E + +  + G+LG ++ F +R+DV+FF+ LE  MR E PPL GRDH+ YRS Y PVK V
Sbjct: 1120 QELLFWSGLQGTLGMLVPFVTREDVEFFTQLEQQMRAEDPPLAGRDHLMYRSYYVPVKGV 1179

Query: 1171 IDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            IDGDLCE+F  LS D ++KIA E+DR   EI KK++E+R ++
Sbjct: 1180 IDGDLCERFMHLSYDGKQKIAAEVDRGVKEIEKKIQEMRTRV 1221


>gi|297820284|ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323863|gb|EFH54284.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 454

 Score =  845 bits (2183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/453 (87%), Positives = 437/453 (96%), Gaps = 1/453 (0%)

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I+RLGETFNET +PLRYTPR+FVLQPK+KL+VIIE+DQGA TAEEREAA+KECFEA G+G
Sbjct: 2    IDRLGETFNETVVPLRYTPRKFVLQPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVG 61

Query: 822  ENGNGNMDQMENG-DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
            ENGNGN DQMENG DDE+K DPLSDEQYGYPKAES+KWVSCIR+LDP++A TTCLLELQD
Sbjct: 62   ENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRILDPKTATTTCLLELQD 121

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
            NEAA+S+CTVNFHDKE+GTLLAVGT KG+QFWPK+N+VAG+IHIYRFVEEGKSLELLHKT
Sbjct: 122  NEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEEGKSLELLHKT 181

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            QVEG+PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI+SI TYRDRIYVG
Sbjct: 182  QVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVG 241

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            DIQESFH+CKYRRDENQLYIFADD VPRWLTA+HH+DFDTMAGADKFGN+YFVRLPQD+S
Sbjct: 242  DIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLS 301

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            +EIEEDPTGGKIKWEQGKLNGAPNK++EIVQFHVGDVVT LQKAS++PGG ES++YGTVM
Sbjct: 302  EEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVM 361

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            GS+GA+ AF+SRDDVDFFSHLEMHMRQE+PPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP
Sbjct: 362  GSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 421

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            TL +DLQRKIADELDRTP EILKKLE+ RNKI+
Sbjct: 422  TLPMDLQRKIADELDRTPAEILKKLEDARNKII 454


>gi|449296290|gb|EMC92310.1| hypothetical protein BAUCODRAFT_151722 [Baudoinia compniacensis UAMH
            10762]
          Length = 1224

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/1242 (38%), Positives = 727/1242 (58%), Gaps = 61/1242 (4%)

Query: 3    LYSLTLQQPTGIIAAINGN-FSGTKTP--EIVVARGKVLELLR-PENSGR----IETLVS 54
             YSLTL+ P+ + AA+  N   G KT   +I  ARG+ + L R  EN  R    + T+V 
Sbjct: 10   FYSLTLEPPSAVTAAVTCNAIPGLKTADQQIFEARGQRIYLHRIVENEDRTVIKLSTVVE 69

Query: 55   TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRI 114
             ++FG +R +A FR+ G+  D ++V SDSGRI +L Y+ +KN F ++H ETFGKSG RR 
Sbjct: 70   QDVFGIVRGVAAFRIPGTPIDQLIVSSDSGRIALLNYDSAKNAFKRVHLETFGKSGIRRT 129

Query: 115  VPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC 174
            +PGQYLA DP+GR  M+ + EK K+VY++NR+  A + ISSP EA++  ++ + IC +D 
Sbjct: 130  IPGQYLANDPRGRCCMLASVEKNKVVYIVNRNAEAEVVISSPHEANQWASLCFGICALDT 189

Query: 175  GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANML 234
            G+++PIFAA+E+DY+EA+ D +G    + +K L +Y +DLGLNHV + W++ VD  AN++
Sbjct: 190  GWEHPIFAALEVDYNEAESDPSGAMYEQREKQLVYYTVDLGLNHVVKSWTDAVDYTANIM 249

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE---RGVLIVSAATHRQ 291
              VPGG DGPSGVLVC E+ + Y++     +   IPRR   P E   R  +IVS   H Q
Sbjct: 250  FGVPGGQDGPSGVLVCCEDRIYYRHDKTSPLCIPIPRRKG-PTEDPNRKRIIVSGCLHLQ 308

Query: 292  KTL--FFFLLQTEYGDIFKVTLEHDNEHVSE-------LKIKYFDTIPVTASMCVLKSGY 342
            K+   FFFLLQTE GD+FK T+E   +           L +KY+DT P    M +++ GY
Sbjct: 309  KSRHEFFFLLQTEDGDVFKFTMEMAKDAQDRPTMEPVRLHMKYYDTYPPAKQMLLIRKGY 368

Query: 343  LFAASEFGNHALYQFQAIGADPDVE-----ASSSTLMETEEGFQPVFFQPRGLKNLVRIE 397
            ++ A+E GN  LY    +  DP+VE      S     +    ++P +F PRGL       
Sbjct: 369  IYVAAENGNSKLYHVNDLAEDPEVEPHNNFTSDGVSSDPAATYEPTYFTPRGLTFTSLAY 428

Query: 398  QVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP-SA 456
             V  L P+M  ++ NL  E+APQI+ + G G  S L+ +R GL ++E+  S L  +    
Sbjct: 429  DVPGLNPLMRTKVDNLTGEDAPQIYAIQGTGNSSVLKTMRHGLEINEIVSSPLGNLQYDN 488

Query: 457  VWTVKKNVNDEFDAYIVVS--FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSL 514
            +W++K    D++ +Y+++S  + + T+VLSIG+ VE + +S FL    ++  + +GD +L
Sbjct: 489  LWSLKHRAVDDYHSYLLLSSGYGDKTIVLSIGDEVETMENSPFLTNRATITANQMGDATL 548

Query: 515  MQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE 574
            +QVH  GI  + E G +NEW  P  RTIV   SN  Q+++ LS  EL +F +   G L +
Sbjct: 549  VQVHARGILSVLESGALNEWPAPAHRTIVAASSNDRQLLLGLSSSELAFFFMGDDGVLNQ 608

Query: 575  VEKH-EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP 633
            +E+  EMSG +  L +   P G++++++  VG  D TIR+ S++ +  ++  SVQ++S+ 
Sbjct: 609  LEEMPEMSGKITALSVGQTPRGQQQAKYAVVGCDDCTIRVYSIELETALEPRSVQALSAV 668

Query: 634  PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
            P S+  +E+       D + +    +++ GLQ+G+  R V+D VTG+L + R+RFLG RP
Sbjct: 669  PTSIEVVEML------DPSSNVLVNYVHIGLQSGLYLRAVIDDVTGELGEVRTRFLGARP 722

Query: 694  PKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVA 753
             ++F V +     ++  SSRPWLGY ++G + LTPL    +E A  F ++  + G  +V 
Sbjct: 723  TRIFPVEIAEEQGIVASSSRPWLGYNNKGTYTLTPLVTGQVEAARPFVTEH-LRGFCAVQ 781

Query: 754  GNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKE 813
            G +L +FT+       + + + L+YTPR     P   +  + ++D   L     +  K +
Sbjct: 782  GQSLLIFTLPTTDGRLSSSEVGLKYTPRAMTRHPYSPVWYVAQSDGNTLA----QGTKDQ 837

Query: 814  CFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT- 872
               A           D   NG DE+       +Q G  ++ +  W SCI+ +DP  A   
Sbjct: 838  LLSA-----------DGAMNGVDED-----VSKQLGLSRS-AGHWASCIQAVDPIFAKAA 880

Query: 873  TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQ--FWPKRNIVAGYIHIYRFVEE 930
            T  +E  DNEAA     V F  K     LAVGT + L+     K     GY+HIY+ +E+
Sbjct: 881  THTIEFTDNEAALCCAAVPFESKNWEVYLAVGTGQHLRPGVSAKGQAPRGYVHIYKLLED 940

Query: 931  GKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI 990
            G+++EL+HKT  +    A+  FQGRL  G+G  L LYD+G K LLRK    +  NTI SI
Sbjct: 941  GRNMELVHKTPFDAPIYAVHAFQGRLALGVGADLFLYDVGLKSLLRKSRGTVVANTITSI 1000

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
            ++  +R+   D+ ES  +  ++   N++  F DD + RW T A  ID++T AG DKFGN+
Sbjct: 1001 DSRGNRLICADVSESITYVVFKPKHNRMIGFVDDVIQRWTTTAAMIDYETSAGGDKFGNL 1060

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG 1110
            + VR P+  S E +E+  GG I  E+  L GAP ++E    F   D+  S+Q+ +LV GG
Sbjct: 1061 WVVRCPEQASKESDEEGLGGYIVNERSYLGGAPYRLELRSHFFTQDIPMSIQRTALVAGG 1120

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDV 1170
             E + +  + G+LG ++ F SR+DV+FF+ LE  +R E PPL GRDH+ YRS Y PVK V
Sbjct: 1121 QEVLFWSGLQGTLGMLVPFVSREDVEFFTQLETLIRAEEPPLAGRDHLMYRSYYVPVKGV 1180

Query: 1171 IDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            IDGDLCE+F  LS D ++KIA E++R   E+ +K++E+R ++
Sbjct: 1181 IDGDLCERFMKLSFDGKQKIAAEVEREVKEVERKVQEMRTRV 1222


>gi|440907208|gb|ELR57379.1| Splicing factor 3B subunit 3 [Bos grunniens mutus]
          Length = 1133

 Score =  842 bits (2176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/784 (53%), Positives = 555/784 (70%), Gaps = 40/784 (5%)

Query: 458  WTVKKNVN-DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQ 516
            W VK  +  DEFDAYI+VSF NATLVLSIGETVEEV+DSGFL TTP+L+ SL+GDD+L+Q
Sbjct: 357  WLVKVLITTDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQ 416

Query: 517  VHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-V 575
            V+P GIRHIR D R+NEW+TPGK+TIVK   N+ QVVIAL+GGEL+YFE+D +GQL E  
Sbjct: 417  VYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYT 476

Query: 576  EKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPE 635
            E+ EMS DV C+ +A+VP G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PE
Sbjct: 477  ERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPE 536

Query: 636  SLLFLEVQASVGGEDGADHPAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFL 689
            SL  +E+    GG +  D          L+LN GLQNGVL RTV+D VTG LSD+R+R+L
Sbjct: 537  SLCIVEM----GGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYL 592

Query: 690  GLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGV 749
            G RP KLF V + G+ A+L +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+
Sbjct: 593  GSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGI 652

Query: 750  VSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AE 805
            V+++ N LR+  +E+LG  FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+
Sbjct: 653  VAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQ 712

Query: 806  EREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVL 865
             ++   +E  EAAG  E      +      +EN    L +  +G PKA + +W S IRV+
Sbjct: 713  RKQQMAEEMVEAAGEDERELA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVM 767

Query: 866  DPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIY 925
            +P   NT  L++L+ NEAAFS+    F +      + VG AK L   P R++  G+++ Y
Sbjct: 768  NPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTY 826

Query: 926  RFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLF-- 983
            + V  G+ LE LHKT VE +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK F  
Sbjct: 827  KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKAFLA 886

Query: 984  ----------------PNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVP 1027
                             N I  I T   R+ V D+QESF + +Y+R+ENQL IFADD+ P
Sbjct: 887  DGSSSVFPMYVAVRHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYP 946

Query: 1028 RWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKME 1087
            RW+T A  +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W++G LNGA  K E
Sbjct: 947  RWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAE 1006

Query: 1088 EIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ 1147
             I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +D DFF H+EMH+R 
Sbjct: 1007 VIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRS 1066

Query: 1148 EHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEE 1207
            EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++ELDRTP E+ KKLE+
Sbjct: 1067 EHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLED 1126

Query: 1208 IRNK 1211
            IR +
Sbjct: 1127 IRTR 1130



 Score =  524 bits (1350), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 248/361 (68%), Positives = 303/361 (83%), Gaps = 6/361 (1%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1   MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61  VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121 LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181 MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240 GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
           G DGPSGVL+C+EN++ YKN G  PD+R  IPRR    D P ERG++ V +ATH+ K++F
Sbjct: 241 GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSATHKTKSMF 299

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           FFL QTE GDIFK+TLE D + V+E+++KYFDT+PV A+MCVLK+G+LF ASEFGN  L 
Sbjct: 300 FFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNQWLV 359

Query: 356 Q 356
           +
Sbjct: 360 K 360


>gi|302504587|ref|XP_003014252.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
 gi|291177820|gb|EFE33612.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
          Length = 762

 Score =  837 bits (2163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/760 (55%), Positives = 546/760 (71%), Gaps = 23/760 (3%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
           M++YSLT+Q PT I  AI G FSGTK  +IV A G  L L R + + G+++TL S ++FG
Sbjct: 7   MFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPAQGKVQTLFSQDVFG 66

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRSLA FRL GS KDYI++GSDSGRI I+EY P++N F++IH ETFGKSG RR+VPGQY
Sbjct: 67  IIRSLAAFRLAGSSKDYIIIGSDSGRITIVEYVPAQNRFNRIHLETFGKSGVRRVVPGQY 126

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRA +I + EK KLVYVLNR+  A LTISSPLEAH+  T+V+++  +D G++NP
Sbjct: 127 LAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYENP 186

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           IFAA+E++Y+E DQD TGQA  E +K L +YELDLGLNHV R+W++PVD  A+ML  VPG
Sbjct: 187 IFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRRWADPVDRTASMLFQVPG 246

Query: 240 GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFF 296
           G DGPSGVLVCAE+ ++Y++      R  IPRR    + P ER   I +   H+ +  FF
Sbjct: 247 GADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENP-ERKRCITAGVMHKMRGAFF 305

Query: 297 FLLQTEYGDIFKVTL---EHDNE----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
           FLLQ+E GD+FKVT+   E +NE     V  LK+KYFDT+P+ +S+C+LKSG+LF ASE 
Sbjct: 306 FLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVASET 365

Query: 350 GNHALYQFQAIGADPD-VE-ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
           GN   YQF+ +G D D +E  S        E   PV+F+PR  +NL  +E + SL P+M 
Sbjct: 366 GNQHFYQFEKLGDDDDEIEFISDDCSAVISEPLPPVYFRPRPAENLNLVESIASLNPLMA 425

Query: 408 MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
             IAN+ EE+APQI+TLCG G RSS R L+ GL VSE+  S+LP VPSAVWT K + ND+
Sbjct: 426 ASIANITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQ 485

Query: 468 FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
           FDAYIV+SF+N TLVLSIGETVEEV+D+GFL + P+LAV  +G+DSL+QVHP GIRHI  
Sbjct: 486 FDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHA 545

Query: 528 DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVAC 586
           D R+NEW  P  R+IV   +N  QV IALS GE++YFE+D  G L E  EK +MSG V C
Sbjct: 546 DQRVNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTC 605

Query: 587 LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
           L +  VPEGR RS FLAVG  D+T+RILSLDPD  ++  SVQ+++S P +L  + +  S 
Sbjct: 606 LSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDST 665

Query: 647 GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
            G       ++L+L+ GL +G+  RTV+D VTG+LSD+R+RFLG++P KLFSV V  + A
Sbjct: 666 SGG------STLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 719

Query: 707 MLCLSSRPWLGY--IHRGRFLLTPLSYETLEYAASFSSDQ 744
           +L LSSR WLGY  +    F LTPL+Y  LE++ +FSS+Q
Sbjct: 720 VLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSSEQ 759


>gi|428180132|gb|EKX49000.1| hypothetical protein GUITHDRAFT_105085 [Guillardia theta CCMP2712]
          Length = 1207

 Score =  835 bits (2157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/1240 (38%), Positives = 742/1240 (59%), Gaps = 60/1240 (4%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LYSLTLQ+P+ I  A+ GNF+G    EIVVA G+ +ELL+ +  GRI +L + E F  
Sbjct: 1    MHLYSLTLQRPSAITFAVRGNFTGCGNHEIVVAHGRAIELLQVDEQGRILSLCNMECFAI 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +R++A  RL G  KD + + SDSG++ I+EYN   N F++++ ET+GKSGCRR+VPGQ+L
Sbjct: 61   VRAMAASRLPGYDKDCVFLTSDSGKLAIIEYNHVMNQFERVYLETYGKSGCRRMVPGQHL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD-NP 179
            A D  GRA++IG+ EK  + + +  D A ++ +  P+++     +   I  +D   +  P
Sbjct: 121  AADMYGRALVIGSLEKNLIGFQVQLDDANQVVLPPPIKSSSPQRVFVHITSLDRREELPP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA+IE+DY +   D   Q    + + +  YE+D+  N +  ++++ +DN +N+L+ V  
Sbjct: 181  MFASIEVDYVDNPNDEF-QDPVVSSRRVCLYEVDMANNSLEVRYNDFIDNSSNLLIPVYN 239

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHR-QKTLFFFL 298
               G  GVL+CAEN +  K+    ++  +IPRR+ LP E+ V+I S      Q  L  F+
Sbjct: 240  HLSGLFGVLICAENKIALKSPDAEEIVLLIPRRSMLPLEQSVIITSYVLMGIQDDLSIFI 299

Query: 299  LQTEYGDIFKVT--LEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
             Q + GD++K+T  L    +HV  L I+Y DT+PV  SM +++  YL   SEFGNH L+ 
Sbjct: 300  AQNDIGDLYKITVSLRCTQDHV--LGIEYLDTVPVAQSMIIVRDQYLLLCSEFGNHILFS 357

Query: 357  FQA--IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
            F A  +G        +S   + E    P F  P  L+    +E++ESL PI+ M++ +L+
Sbjct: 358  FSASEVGQVTSTIGLTSVQFDDENIDIPNFL-PHNLQYFRVVEEIESLSPIVGMKVMDLY 416

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
             E   Q+FTLCG+GPRSS+R+LR GL+V EMA+SQLP VP AVWT+K N  D  D YIVV
Sbjct: 417  SEGNFQVFTLCGKGPRSSIRVLRHGLSVVEMAISQLPTVPVAVWTLKANSTDPHDRYIVV 476

Query: 475  SFNNA---TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI 531
            S  ++   TLVLSIGETVE V++ G L    S++++ +GD  ++QVH +GI+ ++    I
Sbjct: 477  SLAHSSVQTLVLSIGETVEAVANHGLLPHAKSISIATMGD-CMIQVHTNGIQVMKGGKNI 535

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVAC-LDIA 590
                      I+ V +N  Q+++  + G   Y E++ TG L E  K  ++    C +++ 
Sbjct: 536  PSPFASSNPVILSV-NNEQQMLVTQTDGVTSYLEMEGTGTLREKGKININAQEVCAVEVT 594

Query: 591  SVPEGRKRSRFLAVGSY-DNT--IRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
             +   +   +F  +G++ DN   + ++SLD      ++  Q + + P S+  L+  +   
Sbjct: 595  PLSASQTLGKFAIMGAFMDNAWFLCVVSLDASSFSSVVGRQVLQARPSSIALLQSYSRSS 654

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDS-RSRFLGLRPPKLFSVVVGGRAA 706
             E G    +  FL  GL+NGVL R   +  TG++S   R+R LG  P KL  V V  + A
Sbjct: 655  REPGR---SVFFLYVGLENGVLMRMSFNAETGEISQEFRTRSLGSNPVKLVRVKVQEKEA 711

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
            +L LSSR WL Y H+G+  L PLSY+ L++A +FSS QC EG V ++  +LR+ ++ER+G
Sbjct: 712  LLALSSRSWLAYHHQGKQCLDPLSYDMLDFAWNFSSQQCPEGFVCISQGSLRILSLERVG 771

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
            E F++    L +TPR+        +M++IE+D                 +A    ++G  
Sbjct: 772  EIFSQATAKLAHTPRQCAPIKGTTMMMVIESDHNT--------------DANKALQDGAN 817

Query: 827  NMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFS 886
             +D ME  D E   D LS E +G  +A +  W S +RV+D  S  +  ++   D+EAA S
Sbjct: 818  KVD-MEGQDGEA--DKLSYEMFGVQRAGNGCWASSLRVIDMDSLVSRQIINYSDDEAALS 874

Query: 887  ICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIP 946
            +C+    + EH  L+ VGT+ GL+   K +  +G+++ Y     G  L L HKT ++GIP
Sbjct: 875  LCSSVGANGEH--LVLVGTSVGLRMGEK-HASSGFVYTYSV--SGSHLHLEHKTPMDGIP 929

Query: 947  LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESF 1006
             A+C +QGR+L G+G  LR+Y++GKK+LLRKCE++ FPN I SI+T  DRI+VGD  ESF
Sbjct: 930  RAICNYQGRVLVGVGSALRMYEIGKKKLLRKCESRKFPNLICSIHTQGDRIFVGDSAESF 989

Query: 1007 HFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEED 1066
               ++    N   +FA+D+  RWLTA+  +DFDT+AGADKFGN++  R+P++ + E+EE+
Sbjct: 990  SLLRFNSLSNSFELFAEDARARWLTASCPLDFDTVAGADKFGNLFICRIPEEAASELEEE 1049

Query: 1067 PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAM 1126
                 ++ +     GA +K++E+   +VG+ V  LQ+++LV GG E+VIYGT++G LGA+
Sbjct: 1050 GE--AVQTDSVLHRGAKHKLDEVAHQYVGEAVLGLQRSALVQGGTEAVIYGTILGGLGAL 1107

Query: 1127 LAFSSRDDVDFFSHLEMHMRQ-------------EHPPLCGRDHMAYRSAYFPVKDVIDG 1173
              F S++DVDFF  LEM +R              ++P LCG D + +RS + P++ V+DG
Sbjct: 1108 QPFVSKEDVDFFLRLEMLLRGNLGVRESVNDKSFDNPSLCGNDQLGFRSYFAPMRGVVDG 1167

Query: 1174 DLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            DLCE F TL    Q K+A EL +TP E+ KK+E++R +++
Sbjct: 1168 DLCETFHTLDSGRQHKVAAELGKTPEEVAKKIEDMRTRLL 1207


>gi|452820919|gb|EME27955.1| splicing factor 3B subunit 3 [Galdieria sulphuraria]
          Length = 1294

 Score =  827 bits (2135), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/1307 (38%), Positives = 733/1307 (56%), Gaps = 141/1307 (10%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M+LY+LTLQ+P+ I  +++G+FS  +  E+V+ R   LEL+RP+  G +++L   EI+G 
Sbjct: 1    MFLYNLTLQRPSAIYFSVHGSFSAPRAIELVLGRQTSLELVRPDEQGHLKSLCFQEIYGI 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IRSL  FRLTG+++DY+++GSDSG+I +L YNPS   F+++H ETFGKSGCRRIVPG+YL
Sbjct: 61   IRSLKAFRLTGAKRDYLLIGSDSGKITVLLYNPSTYCFERVHIETFGKSGCRRIVPGEYL 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            A DPKGRA MIGA EKQK VYV NRD    LTISSPLEAHKS  I   I G+D GF+NPI
Sbjct: 121  ATDPKGRACMIGAIEKQKFVYVFNRDALENLTISSPLEAHKSSFICNDIIGLDVGFENPI 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            FAA+E  Y             E+ K L FYELDLGLNHV RK + PV+  A  ++ VPGG
Sbjct: 181  FAALERAYD----------PPESPKTLVFYELDLGLNHVVRKLATPVEADAYKVLPVPGG 230

Query: 241  GDGPSGVLVCAENFVIYKN--QGHPDVRAVIPRRAD--LPAERGVLIVSAATHRQKTLFF 296
             DGP GV+VC+   + YK      PD    IP R     P ERG L+V+ A HRQK LFF
Sbjct: 231  RDGPGGVIVCSLQHIRYKTLQNNLPDYICSIPLREKNISPTERGNLVVAFALHRQKGLFF 290

Query: 297  FLLQTEYGDIFKV-----TLEHDNEH----VSELKIKYFDTIPVTAS-MCVLKSGYLFAA 346
            +LL TE GD+FK+     T+E + E     + E++I+Y D++P   + MC+L++G+LF A
Sbjct: 291  YLLCTELGDLFKLEMDCTTIEEEEEGSDIVMKEMRIRYLDSLPCPVNDMCILRNGFLFVA 350

Query: 347  SEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR-GLKNLVRIEQVESLMPI 405
            SE+GNH  YQF+++G + D       + +++   +PV+F     L+NL+ IE++ESL P+
Sbjct: 351  SEYGNHGFYQFRSLGREQDF--CCVGVEDSKWSNEPVYFSLHNNLENLLLIEEIESLAPL 408

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
               +I + + E +PQI    GR  R S + LR G   +EMAVS+LPG P  V+TV++   
Sbjct: 409  TCWQIGDFYGEGSPQIVVGSGRRHRGSWKTLRLGYRWTEMAVSELPGYPVGVFTVREQQQ 468

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            D +D+YI+VSF NA+LVLS+GETVEEVSDSGF     ++ V L  ++S++QVH  GIRHI
Sbjct: 469  DSYDSYIIVSFVNASLVLSVGETVEEVSDSGFSTFVSTIFVQLFSNNSIVQVHAQGIRHI 528

Query: 526  REDGR-INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEK------- 577
            R D + ++EW+ P    I     N  Q+VI L+  +L+YFE+D TG L E+++       
Sbjct: 529  RPDLQTVHEWKPPKGLFIQVADGNASQLVIILNSKQLLYFELDETGMLTEIQEVELIQDQ 588

Query: 578  -HEMSGDVACLDIASVPEGRKRSRFLAVGS-YDNTIRILSLDPDDCMQILSVQSVSSPPE 635
             +E S  + C+ IA +  G+ ++ F+AV        R+ SL  + C++ +S+Q++ +   
Sbjct: 589  SYESSSFLPCVSIAPLVAGQSKASFVAVSDGISYYTRLYSLKKESCLKPISLQALDTVAN 648

Query: 636  SLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPK 695
            S+L + + A       A   + L L  G  +G+  R +VD +TG LS+ +SR +G +P +
Sbjct: 649  SVLLIGLSAP------ASSRSELVLLIGSHSGIYIRALVDPITGALSEQQSRLVGTQPVR 702

Query: 696  LFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLT-PLSYE-TLEYAASFSSDQCVEGVVSVA 753
            L  + + G+   L +SSR +L Y+     L T P+ Y+   ++   F S+QC +GV++  
Sbjct: 703  LQRIEIQGKPVALVVSSRSYLVYLDNHLLLQTLPIGYDWVFDHVVGFCSEQCPDGVIACC 762

Query: 754  GNALRVFTIERLGETFNETAL------PLRYTPRRFV----------LQPKKKLMVIIET 797
            G++L + + E   + F  T L      P  YTPRR V              +  ++ +E 
Sbjct: 763  GSSLCILSFEEDRDLFQTTHLFHSDTQPSLYTPRRLVDREDILSSSITNYTRNRILTLEC 822

Query: 798  DQGALTAEEREAAKKECFEAAG--MGENGNGN--MDQMENGDDE--NKYDPLSDEQYGYP 851
            DQ  + + +   +        G  +G  G+ +  + QM   D++  N  DP+        
Sbjct: 823  DQQIVISPQDIVSHSSSLRQTGYPLGPIGSWSCAIQQMTFMDNQFPNHEDPV-------- 874

Query: 852  KAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVG------- 904
            ++ S +W     + +  +            E   SIC + F        L VG       
Sbjct: 875  ESTSCRWQQKCEIYNSET-----------KEYISSICCIRFSHDSSSLYLCVGVVMDYAL 923

Query: 905  -TAKGLQFWPKRNIV----------AGYIHIYRFVEEGKSLELLHKTQVEG--------- 944
                 L+  P ++ +             I +YR+ E     E +H T ++          
Sbjct: 924  QVTNPLEKNPTKDNIDIQRESIVFPRSEIRVYRWNE--TQWEYIHTTPIQDASSHRMEWN 981

Query: 945  -------------------IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN-KLFP 984
                               I   +  FQG LL  +G  LR+YDLGKK+LL+K ++ +  P
Sbjct: 982  YDYGASHLSFHAASRYRNEIITTMASFQGHLLVAVGTSLRMYDLGKKQLLKKTQHPRATP 1041

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
            + I  I T  DRI++ D+QES    +Y   +N     ADD +P+W T    +D+DT+A  
Sbjct: 1042 HKITCIETCYDRIFLSDVQESVFLYRYSAADNLFLCIADDYLPKWCTTMCLLDYDTVAIG 1101

Query: 1045 DKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKA 1104
            DK GNI  +RLP +    IE+DPTGG +  E      AP+  +    ++VG V+  L K 
Sbjct: 1102 DKMGNISILRLPPEAGTFIEQDPTGGLLSKE------APHHFQLEACYYVGSVIQCLSKV 1155

Query: 1105 SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY 1164
                G    + YGT+ G++G M+   S  D++ F  LE+ +R+   PLCGR H+AYRS +
Sbjct: 1156 EWTTGDVPLLFYGTLDGAIGVMIPLRSTLDMELFQALELQLREYRSPLCGRHHLAYRSYF 1215

Query: 1165 FPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            FPV+ VIDGDLCE+F  LSL+ Q KI  ELDR+  ++ +KLE+ R +
Sbjct: 1216 FPVRHVIDGDLCEEFYRLSLEQQEKIVKELDRSIVDVHRKLEDYRER 1262


>gi|358253751|dbj|GAA53701.1| splicing factor 3B subunit 3, partial [Clonorchis sinensis]
          Length = 726

 Score =  823 bits (2127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/638 (62%), Positives = 503/638 (78%), Gaps = 9/638 (1%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           MYLY++TLQ+ +GI  A++GNFSGTK  EI VARGK++ELLRP+ NSG++ TL++ E FG
Sbjct: 4   MYLYNITLQRASGITHAVHGNFSGTKQQEIAVARGKIIELLRPDPNSGKVYTLLTCEAFG 63

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRS   FRLTGS KDY++VGSDSGR+V+LEY PSKN F+K+ QETFGKSGCRRIVPGQY
Sbjct: 64  IIRSFMPFRLTGSSKDYLIVGSDSGRVVVLEYIPSKNAFEKLQQETFGKSGCRRIVPGQY 123

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAV+PKGRA MIGA EKQKLVY++NRD+ ARLTISSPLEAHKS+T+VY + G+D GF+NP
Sbjct: 124 LAVNPKGRAFMIGAVEKQKLVYIMNRDSQARLTISSPLEAHKSNTLVYHMVGVDVGFENP 183

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FA IE+DY +ADQDSTG+AA  A + LT+YELDLGLNHV RK+SEP++  AN L+ VPG
Sbjct: 184 LFACIEMDYEDADQDSTGEAARGANQLLTYYELDLGLNHVVRKYSEPLEEHANFLIAVPG 243

Query: 240 GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIP-RRADL-PAERGVLIVSAATHRQKTLFF 296
           G +GPSG+L+C+EN++ YKN G  PD+R  IP RR +L   +RG+L V +A+H+ K LFF
Sbjct: 244 GNEGPSGILICSENYITYKNFGDQPDIRCPIPQRRNNLDDPDRGILFVCSASHKTKNLFF 303

Query: 297 FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
           FL QTE GDIFK+ LE D++ V+E+K+KYFDT+PV ++MCVLK+G+LF ASEFGNH+LYQ
Sbjct: 304 FLAQTEQGDIFKINLEVDDDMVTEIKLKYFDTLPVASAMCVLKTGFLFVASEFGNHSLYQ 363

Query: 357 FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
              +G D D E   S+ M  EEG    +F PR LKNL+ ++ +E+L PIM   IA+   E
Sbjct: 364 IAHLGDDDD-EPEFSSAMPLEEG-DTFYFAPRALKNLIEVDVLENLSPIMHYHIADFANE 421

Query: 417 EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
           + PQ+  LCGRGP S+ R+LR GL VSEMA S LPG P+AVWTVK+N  +E+DAYI+VSF
Sbjct: 422 DTPQLAVLCGRGPGSTFRLLRHGLEVSEMAKSDLPGNPNAVWTVKRNSEEEYDAYIIVSF 481

Query: 477 NNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRT 536
            NATLVLSIGETVEEV+DSGFL TTP+L  S +GDD+L+QV+P GIRHIR D R+N WR 
Sbjct: 482 VNATLVLSIGETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHIRADKRVNVWRA 541

Query: 537 PGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDVACLDIASVPEG 595
           PGK+ IV+   NR QVVIAL+GGEL+YFE+DMTGQL E  E+ EM  DV C+ +  +P  
Sbjct: 542 PGKKMIVRCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPADVICMALGRIPTS 601

Query: 596 RKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP 633
            +RSRFLAVG  DNT+RILSLDP   +  +S +  S+P
Sbjct: 602 EQRSRFLAVGLADNTVRILSLDPS--VSRVSCERFSTP 637


>gi|67600754|ref|XP_666354.1| CG13900 gene product [Cryptosporidium hominis TU502]
 gi|54657334|gb|EAL36124.1| CG13900 gene product [Cryptosporidium hominis]
          Length = 1318

 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/1337 (35%), Positives = 737/1337 (55%), Gaps = 148/1337 (11%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFGA 60
            + YSLTL+    I++AI G++S  K  EIVV RG+ LELLR + N+ +I ++   + F  
Sbjct: 3    HFYSLTLESHGSILSAIQGSYSAAKAHEIVVNRGRSLELLRLDVNAAQIRSICLMDTFSL 62

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +RS++  RL GS KD IVV SDSG IVIL++N  KN F++IH E +GKSGCRRIVPG YL
Sbjct: 63   VRSISNLRLIGSGKDLIVVTSDSGNIVILDFNKDKNQFERIHSEPYGKSGCRRIVPGHYL 122

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDT--AARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            AVDP GR++MI A E+QKLVY L R    A  L ISSP+EAHKSH + +++  +D GFDN
Sbjct: 123  AVDPMGRSIMIAAIERQKLVYTLTRKNKDADILDISSPMEAHKSHMVCFALVAMDVGFDN 182

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P+FA IE  YS  +++       + +K+L F+E+DLGLN+VSRK S+ + + ++ L++VP
Sbjct: 183  PMFATIEQSYSTENEE-----LQQTKKHLIFWEVDLGLNYVSRKSSQVITDSSHTLISVP 237

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
            GG DGPSGVLVC    +IY   GH ++    P R    +E G +IV+++ H+ K  F  L
Sbjct: 238  GGNDGPSGVLVCDYKGIIYCKVGHSNIFCPYPFRFGDSSEYGTMIVASSLHKLKGFFLIL 297

Query: 299  LQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            +QTE GDI+++ L H+   V E++I Y+DTIPV  S+ +L+SG+LFA+ EFGNH  YQ  
Sbjct: 298  VQTELGDIYRINLIHNEGIVKEMRIYYYDTIPVCNSLLLLRSGFLFASHEFGNHTNYQIV 357

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
            ++G D     +SS  +      + V+F+PR  + + + E++ SL PI D+++ +   +  
Sbjct: 358  SLGDDKTDPCTSS--LPDSNDLKRVYFRPRNCQCIRKSEEILSLSPITDIKVIDTNNDGT 415

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN------------- 465
            PQI   CGRGPRS+LR+   G  V E+A + LPG P  +WT+K  ++             
Sbjct: 416  PQIVATCGRGPRSTLRVCSYGKNVEEIAENPLPGRPRCIWTLKNGIDPSLSGSQAEAAIL 475

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRH 524
            D    YI++SF + +LVL+IGE VEE +D+ F L+ T   A S+I  +S +QV  + ++ 
Sbjct: 476  DNIHHYIIISFIDRSLVLTIGEHVEETNDTLFTLNETTMYAASMIFYNSFLQVLETHVKL 535

Query: 525  IREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT----------GQLLE 574
            I +D RI +W+TP  R I+   SN  QV +AL GG ++  E+++           G L+E
Sbjct: 536  IIQD-RIYDWKTPDSRKIIAADSNGRQVSLALEGGLIVILELNVNGVSGITNTGIGGLVE 594

Query: 575  VEKHEMSGDVACLDIASVP-EGRKRSRFLAVG-SYDNTIRILSLDPDD------CMQILS 626
            V + E++ ++ C+ I  +   G+ RS ++ VG S +N +R+  +D  +      C QIL 
Sbjct: 595  VCRREITCEIICIGIQQLSYSGQMRSDYVVVGTSTENALRLYKIDSAEKRLKQTCTQILP 654

Query: 627  VQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRS 686
              + +S PE++              ++    L L  GL  GV+    VD   G +SD RS
Sbjct: 655  --NSNSIPENVQLYH----------SNKYGHLILFVGLTTGVILSCKVDASNGSISDPRS 702

Query: 687  RFLGLRPPKLFSVV---VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSD 743
            ++LG R   +  ++    GG  +++C+SSRPWL          TPL Y  ++  A  ++ 
Sbjct: 703  KYLGNRGVNICRIMREDFGGEMSLVCMSSRPWLVDSQTSGVNFTPLQYRCIDSIAPLNTH 762

Query: 744  QCVEGVVSVAGNALRVFTIER-LGETFNETALPLRYTPRRFVLQ---------------- 786
            Q   G V+V+G+ L +F + +  GE+F+++++ L YTPR+ +                  
Sbjct: 763  QVNNGYVAVSGSTLLIFQVTQGFGESFSQSSINLSYTPRKLLTLPSPQLFTGLETLMSSG 822

Query: 787  ----PKKKLMVIIETDQGAL---TAEEREAAKKECFEAAGMGENGNGNMDQM-------- 831
                PK +++ I+ETD  +    T +E  +A ++ +    +  N +  M+++        
Sbjct: 823  TLDIPKDQMIAIVETDHNSFDFGTKKEIISALQKLYNDKPLENNTDVKMEEVEEDEEKQK 882

Query: 832  ------ENGDD--------------ENKYDPLSDE-----QYGYPKAESD---------K 857
                  E+GD+              + K + +  E     + G   AES+         K
Sbjct: 883  NDLKVKEDGDNLVMDIAQDEAQDSEKTKIEKMLSEIGIPGESGVLLAESEVGGFFAGEGK 942

Query: 858  WVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQF------ 911
            W  C+R+++ +S  T  L+ L  NE   S C   F D+     L +GT  G++       
Sbjct: 943  WGGCVRIVNLKSMETIQLIPLDTNEGCISACVCKF-DELDLPCLVLGTVYGMKLNRGYNN 1001

Query: 912  ---------------WPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRL 956
                               +     I I+++ +   + EL+H T +E    AL  ++GRL
Sbjct: 1002 NNNSNNNTDSAKNNDKENHDSFGAAIKIFKY-DSNYNFELVHITPIENSATALTGWRGRL 1060

Query: 957  LAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN 1016
            L GI   LR+Y LGKKRLLRK E +  P  +  I    DRI+ GDI       K+    N
Sbjct: 1061 LVGINKTLRVYSLGKKRLLRKSEYRNIPQGLTWIKVVNDRIFAGDISNGVLVFKFNNTSN 1120

Query: 1017 QLYIFADDSVPRWLTAAHHI-DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWE 1075
            Q  + A D +PRWLT+A  + D+ T+A +DKF NI   R+P + SD+     +       
Sbjct: 1121 QFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSRVPVEASDDFSFVTSFTDNNNS 1180

Query: 1076 QGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDV 1135
            Q       +++  + QFH+GD+VT LQK+ L P   E++IYGTV+GS+G++    + +D+
Sbjct: 1181 QSSALMRTHQINTVAQFHLGDIVTCLQKSQLTPTSAEAIIYGTVLGSIGSLSPILNNEDI 1240

Query: 1136 DFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELD 1195
            +  S LE+ +R++   L  RDH+ +RS Y PV +VIDGD C+ F  L   +Q +IA +LD
Sbjct: 1241 ELLSKLEILLRKQKSTLLSRDHLMFRSYYSPVHNVIDGDFCQTFTILDSKIQSEIASKLD 1300

Query: 1196 RTPGEILKKLEEIRNKI 1212
             T  EI KKL++ + ++
Sbjct: 1301 VTVEEIYKKLDDYKTRL 1317


>gi|66361481|ref|XP_627314.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
 gi|46228697|gb|EAK89567.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
          Length = 1317

 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/1336 (35%), Positives = 740/1336 (55%), Gaps = 147/1336 (11%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFGA 60
            + YSLTL+    I++AI G++S  K  EIVV RG+ LELLR + N+ +I+++   + F  
Sbjct: 3    HFYSLTLESHGSILSAIQGSYSAAKAHEIVVNRGRSLELLRLDVNAAQIQSICLMDTFSL 62

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +RS++  RL GS KD IVV SDSG IVIL++N  KN F++IH E +GKSGCRRIVPG YL
Sbjct: 63   VRSISNLRLIGSGKDLIVVTSDSGNIVILDFNKDKNQFERIHSEPYGKSGCRRIVPGHYL 122

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDT--AARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            AVDP GR++MI A E+QKLVY L R    A  L ISSP+EAHKSH + +++  +D GFDN
Sbjct: 123  AVDPMGRSIMIAAIERQKLVYTLTRKNKDADILDISSPMEAHKSHMVCFALVAMDVGFDN 182

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P+FA IE  YS  +++       + +K+L F+E+DLGLN+VSRK S+ +   ++ L++VP
Sbjct: 183  PMFATIEQSYSTENEE-----LQQTKKHLIFWEVDLGLNYVSRKSSQVITESSHTLISVP 237

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
            GG DGPSGVLVC    +IY   GH ++    P R    +E G +IV+++ H+ K  F  L
Sbjct: 238  GGNDGPSGVLVCDYKGIIYCKMGHSNIFCPYPFRFGDSSEYGTMIVASSLHKLKGFFLIL 297

Query: 299  LQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            +QTE GDI+++ L H+   V E++I Y+DTIPV  S+ +L+SG+LFA+ EFGNH  YQ  
Sbjct: 298  VQTELGDIYRINLIHNEGIVKEMRIYYYDTIPVCNSLLLLRSGFLFASHEFGNHTNYQIV 357

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
            ++G D   +  +S+L ++ +  + V+F+PR  + + + E++ SL PI D+++ +   +  
Sbjct: 358  SLG-DDKTDPYTSSLPDSND-LKRVYFRPRNCQCIRKSEEILSLSPITDIKVIDTNNDGT 415

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN------------- 465
            PQI   CGRGPRS+LR+   G  V E+A + LPG P  +WT+K  ++             
Sbjct: 416  PQIVATCGRGPRSTLRVCSYGKNVEEIAENPLPGRPRCIWTLKNGIDPSLSGSQAEAAIL 475

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRH 524
            D    YI++SF + +LVL+IGE VEE +D+ F L+ T   A S+I  +S +QV  + ++ 
Sbjct: 476  DNIHHYIIISFIDRSLVLTIGEHVEETNDTLFTLNETTMYAASMIFYNSFLQVLETHVKL 535

Query: 525  IREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT----------GQLLE 574
            I +D RI +W+TP  R I+   SN  QV +AL GG ++  E+++           G L+E
Sbjct: 536  IIQD-RIYDWKTPDSRKIIAADSNGRQVSLALEGGLIVILELNVNGVSGITNTGMGGLVE 594

Query: 575  VEKHEMSGDVACLDIASVP-EGRKRSRFLAVG-SYDNTIRILSLDPDD------CMQILS 626
            V + E++ ++ C+ I  +   G+ RS ++ VG S +N +R+  +D  +      C QIL 
Sbjct: 595  VCRREITCEIICIGIQQLSYSGQMRSDYVVVGTSTENALRLYKIDSAEKRLKQTCTQILP 654

Query: 627  VQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRS 686
              + +S PE++              ++    L L  GL  GV+    VD   G +SD RS
Sbjct: 655  --NSNSIPENVQLYH----------SNKYGHLILFVGLTTGVILSCKVDASNGSISDPRS 702

Query: 687  RFLGLRPPKLFSVV---VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSD 743
            ++LG R   +  ++    GG  +++C+SSRPWL          TPL Y  ++  A  ++ 
Sbjct: 703  KYLGNRGVNICRIMREDFGGEMSLVCMSSRPWLVDSQTSGVNFTPLQYRCIDSIAPLNTH 762

Query: 744  QCVEGVVSVAGNALRVFTIER-LGETFNETALPLRYTPRRFVLQ---------------- 786
            Q   G V+V+G+ L +F + +  GE+F+++++ L YTPR+ +                  
Sbjct: 763  QVNNGYVAVSGSTLLIFQVTQGFGESFSQSSINLSYTPRKLLTLPSPQLFTGLETLMSSG 822

Query: 787  ----PKKKLMVIIETDQGAL---TAEEREAAKKECFEAAGMGENGNGNMDQM-------- 831
                PK +++ I+ETD  +    T +E   A ++ +    +  N +  M+++        
Sbjct: 823  TLDIPKDQMIAIVETDHNSFDFGTKKEIILALQKLYNDKPLENNTDVKMEEVEEDEEKQK 882

Query: 832  ------ENGDD--------------ENKYDPLSDE-----QYGYPKAESD---------K 857
                  E+GD+              + K + +  E     + G   AES+         K
Sbjct: 883  NDLKVKEDGDNLVMDIAQDEVQDSEKTKIEKMLSEIGIPGESGVLLAESEVGGFFAGEGK 942

Query: 858  WVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQF------ 911
            W  C+R+++ +S  T  L+ L  NE   S C   F D+     L +GT  G++       
Sbjct: 943  WGGCVRIVNLKSMETIQLIPLDTNEGCISACVCKF-DELDLPCLVLGTVYGMKLNRGYNN 1001

Query: 912  --------------WPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLL 957
                              +     I I+++ +   + EL+H T +E    AL  ++GRLL
Sbjct: 1002 NNSNNSTDSAKNNDKENHDSFGAAIKIFKY-DSNYNFELVHITPIENSATALTGWRGRLL 1060

Query: 958  AGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQ 1017
             GI   LR+Y LGKKRLLRK E +  P  +  I    DRI+ GDI       K+    NQ
Sbjct: 1061 VGINKTLRVYSLGKKRLLRKSEYRNIPQGLTWIKVVNDRIFAGDISNGVLVFKFNNTSNQ 1120

Query: 1018 LYIFADDSVPRWLTAAHHI-DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ 1076
              + A D +PRWLT+A  + D+ T+A +DKF NI   R+P + SD+     +       Q
Sbjct: 1121 FILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSRVPAEASDDFSFVTSFTDNNNSQ 1180

Query: 1077 GKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
                   +++  + QFH+GD+VT LQK+ L P   E++IYGTV+GS+G++    + +D++
Sbjct: 1181 SSALMRTHQINTVAQFHLGDIVTCLQKSQLTPTSAEAIIYGTVLGSIGSLSPILNNEDIE 1240

Query: 1137 FFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
              S LE+ +R++   L  RDH+ +RS Y PV +VIDGD C+ F  L   +Q +IA +LD 
Sbjct: 1241 LLSKLEILLRKQKSTLLSRDHLMFRSYYSPVHNVIDGDFCQTFTILDSQIQSEIASKLDV 1300

Query: 1197 TPGEILKKLEEIRNKI 1212
            T  EI KKL++ + ++
Sbjct: 1301 TVEEIYKKLDDYKTRL 1316


>gi|71028348|ref|XP_763817.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350771|gb|EAN31534.1| hypothetical protein TP04_0182 [Theileria parva]
          Length = 1231

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/1295 (37%), Positives = 728/1295 (56%), Gaps = 153/1295 (11%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY+LTL++PTG+ A++ G+FS  K  E VVAR  VLEL     SG+++ LVS E FG +R
Sbjct: 4    LYNLTLKKPTGVTASVPGSFSAPKAQEFVVARAHVLELYGLNASGKLQQLVSVEAFGIVR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            +LA FRLTG+Q+DY+VV SDSGRIVILEY+   N F ++H ET+GK+G RRIVPGQYLAV
Sbjct: 64   ALAAFRLTGAQRDYLVVTSDSGRIVILEYSTQTNSFKRLHCETYGKTGVRRIVPGQYLAV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGRA+MIGA E+QK VY+LNRD+ A LTISSPLEAHKSH++ + +  ++ G+DNPIFA
Sbjct: 124  DPKGRALMIGAVERQKFVYILNRDSKANLTISSPLEAHKSHSVCFDLVALEVGYDNPIFA 183

Query: 183  AIELDYSEAD---QDSTGQAASEAQ-----KNLTFYELDLGLNHVSRKWSEPVDNGANML 234
            ++E  Y   D    D   +   E +     K L+F+E+DLGLNHV +K + PVD  A++L
Sbjct: 184  SLEQSYEAIDTVQMDIQTKLTKEMETDLLRKGLSFWEMDLGLNHVVKKVTLPVDLSAHLL 243

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            V VP    GP GVLVC EN+++YKN  HPDV    PRR  +     +LI++ + HR K  
Sbjct: 244  VPVP---GGPGGVLVCCENYLVYKNLEHPDVFCSYPRRLQMAETDSLLIINYSVHRMKDF 300

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
            FF LL +EYGD++K+ L HD+  VSE+ ++YFDT+ V ++MC+L+SGYLF  SE G+H L
Sbjct: 301  FFILLLSEYGDLYKIELSHDDTTVSEIVVRYFDTVDVASTMCILRSGYLFVGSESGDHKL 360

Query: 355  YQFQAI-GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANL 413
            YQF A+   D DV  +S   +  +     + F+PR L+NL  ++++ S+   +DM++ ++
Sbjct: 361  YQFTALENGDKDVICTS---LHPDAKNAIIAFKPRKLQNLAVVDRMNSMALAVDMKVVDV 417

Query: 414  FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIV 473
                   IF  CGR   S L+ LR G    E+A ++LPG P AV+T+ K++   +D YI+
Sbjct: 418  LGLNNYDIFVACGRWYDSRLKCLRYGFNTEELAFNELPGRPKAVFTI-KSLESNYDEYII 476

Query: 474  VSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-------LMQVHPSGIRHIR 526
            +SF   TLVLSIGE VEEV+DS FL +  +L    +G  S        +QVH  G R++ 
Sbjct: 477  ISFQGNTLVLSIGEAVEEVTDSFFLTSITTLHSCHMGSTSGSVGGGIFVQVHDGGFRYLT 536

Query: 527  EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG--QLLEVEKHEMSGDV 584
             D  + EW+    + +    +N  Q+V+ L+GGE+IYF++      +L+EV +  +S +V
Sbjct: 537  GD-VVKEWKVQTTKRVKLADNNNTQLVLVLTGGEVIYFQLTEADVLELVEVGRRNLSTEV 595

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEV 642
             CL +     G K + F   GS DN +R++ LD    +++ S Q +  +S PES+  L  
Sbjct: 596  TCLAVQHQVSGNK-AEFCCCGSIDNIVRVMKLDK--TLKLCSSQILGNNSLPESVALLTT 652

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
                           L+L  GL NGVL R  VD V G LSD  SRFLG +P +L  V   
Sbjct: 653  SVD-----------ELYLYVGLNNGVLIRNTVD-VAGNLSDQESRFLGAKPLRLKLVQYL 700

Query: 703  GRAAMLCLSSRPWL-----------------GYIH--RGRFLLTP----LSYETLEYAAS 739
             R  +L L+ + ++                  YI+       L+P    LS ++++   +
Sbjct: 701  DRQCLLLLTVKTFIVVPNYPTSGNGNLEILPVYINSTNATVTLSPSNAMLSVDSID---T 757

Query: 740  FSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK--------- 790
            F+S  C+ G VS+ GN+L++F     G+ F+E  +PL YTPR+ +L P            
Sbjct: 758  FNSLLCLNGFVSILGNSLKIFRCLVNGDVFSEITIPLEYTPRKLILLPSSTLTQGALNTG 817

Query: 791  ----------------LMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENG 834
                            L++++E+D  +   E+ E   KE                Q+E G
Sbjct: 818  VNPAVPQGPVPGQLNVLLLVVESDYNSYNTEQVEEINKEMTSI------------QLE-G 864

Query: 835  DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD 894
            D    ++P+  + Y   +A   KW SCIR+++P +  T   L   +NEAA +  +   + 
Sbjct: 865  D---HFEPMELKNY---RAGPGKWSSCIRIINPVNMETIAKLLFTENEAATAAYSCVLNG 918

Query: 895  KEHGTLLAVGTAKGLQFWPKRNI-----VAGYIHIYRFVEE-------GKSLELLHKTQV 942
            ++   LL VGT K    +P  N      V   I +Y +          G S++LLH T  
Sbjct: 919  QQ---LLVVGTIKNAHLYPSNNDDGNDEVESSIRVYEYDSNYANLGNTGFSIKLLHVTNT 975

Query: 943  EGIPLALCQFQGR-LLAGIGPVLRLYDLGKKRLLRKCENK-LFPNTIVSINTYRDRIYVG 1000
            +G       ++ + LL  IG  LR+Y LG+K++L K E++ L  N  + I     RIY G
Sbjct: 976  KGWIRCFNNYENKLLLCAIGSKLRMYALGRKQMLLKGEHRSLTSNGFMDIKVVGSRIYCG 1035

Query: 1001 DIQESFHFCK---YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
            DI+ES    +   Y  D  +  +    + PRWL+    +D+ T+   DKF +++  R+P 
Sbjct: 1036 DIRESVQLLRLKFYGEDLGEFELTTTSTGPRWLSTMELLDYSTVIAGDKFDSLFVSRVPH 1095

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYG 1117
            +      ED                 N  E   QFH+GD+VTSLQ+  + P   E V+Y 
Sbjct: 1096 N------EDVV-------------RSNYFEYHNQFHLGDIVTSLQRVRINPIHSEVVLYT 1136

Query: 1118 TVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCE 1177
            T+MGS+G ++ F S+D++DF  HLEM +  +   + GR+   +RS YFPV++++DGDLCE
Sbjct: 1137 TLMGSIGVLIPFVSKDELDFLQHLEMLLCNQIDTVTGREVQMFRSYYFPVQNIVDGDLCE 1196

Query: 1178 QFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             F  L  D +  +A++L+    E++KKL+ IRN++
Sbjct: 1197 MFTALG-DEKFNVANQLNLKVAEVVKKLKNIRNRV 1230


>gi|209875989|ref|XP_002139437.1| spliceosomal protein SAP 130 [Cryptosporidium muris RN66]
 gi|209555043|gb|EEA05088.1| spliceosomal protein SAP 130, putative [Cryptosporidium muris RN66]
          Length = 1300

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/1326 (37%), Positives = 740/1326 (55%), Gaps = 142/1326 (10%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFGA 60
            Y YSLTL+    I+ AI G++S  +  E+VV RG+ LELL+ + S GRI ++   E+F  
Sbjct: 3    YFYSLTLEPQGAILGAIQGSYSAARAHEVVVNRGRSLELLQIDTSTGRIGSVCRMEVFSL 62

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IR +A FRL GS +D+IV  SDSG IV+LEY     +F ++H E +GKSGCRRIVPGQYL
Sbjct: 63   IRCIANFRLIGSSRDFIVATSDSGNIVLLEYKKENKLFVQLHSEPYGKSGCRRIVPGQYL 122

Query: 121  AVDPKGRAVMIGACEKQKLVYVLN---RDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
             VDP GR++MI A E+QK VY LN   +DT + + ISSP+E HKS+ I +S+  +D G+D
Sbjct: 123  GVDPGGRSIMISAIERQKFVYTLNFENKDTKS-INISSPIEVHKSNMICFSLVAVDVGYD 181

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTV 237
            NP+FA IE  Y     D T       Q+ L F+E+DLGLNHV RK +  +   ++++++V
Sbjct: 182  NPMFATIEQAYDTQIDDCT-------QRQLIFWEVDLGLNHVIRKSAFNISLTSHLVLSV 234

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
            PGG +GP GVLVC +  + Y N  H  +    P+R   P + G  IVS+A H+ +  FF 
Sbjct: 235  PGGSEGPGGVLVCDQKGLYYYNIDHTVLFCSYPQRFGAPNDAGTAIVSSALHKLRKFFFI 294

Query: 298  LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            L+Q+E GDI++V   H+   V+++KI Y+DTIP+  SM VL+SG+LFAA EFGNH+ YQF
Sbjct: 295  LIQSECGDIYRVQFMHNEGIVNKIKIYYYDTIPLCNSMLVLRSGFLFAAHEFGNHSNYQF 354

Query: 358  QAIGADPDVEASSSTLM---ETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
              +G D +   SSS  +    T   ++ VFF+PR    + +++ + SL PI+DM+IA+  
Sbjct: 355  LTLGDDENDSYSSSISVLAGNTINSYEKVFFRPRNCHCIRKVDIMHSLSPIIDMKIADSS 414

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK------------ 462
             E  PQI+  CGRGPRS+LRI   G AV EMA + LPG P  +WT+KK            
Sbjct: 415  GEFGPQIYVACGRGPRSTLRICTYGKAVEEMAETPLPGRPRFIWTLKKGGTSYILNKETS 474

Query: 463  -NVNDE--FDAYIVVSFNNATLVLSIGETVEEVSDSGF-LDTTPSLAVSLIGDDSLMQVH 518
              + DE  + ++I++SF + TLVLS+GE VEE+SDS F L  +   A S+   +S +Q+ 
Sbjct: 475  ETLEDEGNYHSFIIISFIDRTLVLSVGEQVEEISDSPFTLSESTIYASSMELKNSYLQIL 534

Query: 519  PSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD----MTGQ--- 571
             + ++ I E+ +I EW+ P  R IV   SN  Q+ +ALSGG ++  E++    ++G    
Sbjct: 535  ETYVKLITEE-KIYEWKAPDGRHIVAADSNGRQISLALSGGYIVILEMNTIDLISGTTNS 593

Query: 572  ---LLEVEKHEMSGDVACLDIASVPEGRKRSR-FLAVG-SYDNTIRILSLD-PDDCMQIL 625
               L E+   E+S D+ C+ I  +    K  R ++AVG S DN++R+  ++  D  ++  
Sbjct: 594  IMGLTELCHREVSYDIICISIQQLIYPTKLCREYVAVGTSTDNSVRVYWINTADKKLKQT 653

Query: 626  SVQ---SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLS 682
            S Q   + SS PE+++  +     G  D      SL+L  GL NGVL   +VD + G LS
Sbjct: 654  STQVMPNASSIPENIVLYK----PGLND------SLYLLIGLNNGVLLCCIVDELNGTLS 703

Query: 683  DSRSRFLGLRPPKLFSVVVG--GRAAMLCLSSRPWLGYIHRGRFL-LTPLSYETLEYAAS 739
            D+RSRFLG +  K+  V +G   + +  C+++RPW+   H GR L   P+ Y TL+  A 
Sbjct: 704  DNRSRFLGGKSIKMVRVGIGEYNKLSTFCMANRPWI-VNHNGRSLNYIPIQYRTLDTVAP 762

Query: 740  FSSDQCVEGVVSVAGNALRVFTIERLGE-TFNETALPLRYTPRRFVLQ------------ 786
            F + Q   G V+V+G  L +F +      TF  + + L YTPR+ +              
Sbjct: 763  FHTKQFKNGFVAVSGTTLVIFQVLYDDSGTFTHSIIKLNYTPRKLLFLPPPQLFCGLETL 822

Query: 787  --------PKKKLMVIIETDQGALTAEEREAAKKECFEA-AGMGENGNGNMDQ------- 830
                    PK +++ IIETD  A         KKE  EA   M ++ N ++++       
Sbjct: 823  MVSGILDIPKSQMIAIIETDHNAFDYN----TKKEIIEALQKMYDDDNKSLEEIGTKNEV 878

Query: 831  ---------------------MENGDDEN--KYDPLSDEQYGYPKAES------------ 855
                                 M+  D  N  K +   D+  G P +++            
Sbjct: 879  LTEVKHELSSHSTINTADEGVMDVDDTTNSAKQEDSIDKILGIPGSDNALLPESEVGSFL 938

Query: 856  ---DKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFW 912
                 W SCIRV++  +  T  LL L  NE   S C   F D+     L VGT  G++  
Sbjct: 939  AGDGIWGSCIRVVNSTTKTTEQLLYLDVNEGCISACVCKF-DEMDLPCLVVGTTYGMKLR 997

Query: 913  PKRN----IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYD 968
             + N     +   I +Y + +   +L+L+H T +E +   +  ++GRLL  I   LR+Y 
Sbjct: 998  KEYNENSSTLGATIKVYNY-DTNFNLKLVHVTPIENVATCMIGWRGRLLVSINKTLRIYS 1056

Query: 969  LGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPR 1028
            LGKK+LL+KCE +  P  +V +    DRI+ GDI+      KY   +N+L I A+D +PR
Sbjct: 1057 LGKKKLLKKCEYRNIPEVLVWLKVINDRIFAGDIRHGVIIFKYHSVQNRLSIIANDIMPR 1116

Query: 1029 WLTAAHHI-DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKME 1087
            WLT+A  I D+ T+  +DKF N+   R+P + S     D T              P ++ 
Sbjct: 1117 WLTSACEILDYHTVITSDKFDNLIVCRVPTEASSNY--DFTSNFNSQTNTSSYMKPYQIN 1174

Query: 1088 EIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ 1147
             +  FHVGD+VT + K  L P G E++I+GT++GS+G +   +++DDVD    LE+ +R 
Sbjct: 1175 PVAHFHVGDLVTCIHKNQLSPLGVETLIFGTILGSIGTLTPITNKDDVDLLCKLELLLRN 1234

Query: 1148 EHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEE 1207
            E P L  RDH+ +RS Y PV +VIDGDLCE F + S D+Q +IA  LD +  EI KKL++
Sbjct: 1235 ESPSLMSRDHLMFRSYYAPVLNVIDGDLCETFTSYSSDVQARIASSLDISIQEIFKKLDD 1294

Query: 1208 IRNKIV 1213
            +R +++
Sbjct: 1295 LRTRVL 1300


>gi|403224220|dbj|BAM42350.1| splicing factor 3b subunit [Theileria orientalis strain Shintoku]
          Length = 1272

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/1327 (36%), Positives = 725/1327 (54%), Gaps = 176/1327 (13%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
            LY LTL++PTGI   + G+FS  K  EIVVAR  +LEL   +++G+++T+ S E+FG +R
Sbjct: 4    LYHLTLKKPTGITTCVQGSFSAPKAQEIVVARSHILELYSLDSNGKLQTVASAEVFGIVR 63

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            +++ FRLTGSQKDY+VVGSDSG++VILE++     F ++H ET+GK+G RRIVPGQYL V
Sbjct: 64   AISAFRLTGSQKDYLVVGSDSGKLVILEFSLELKTFKRVHCETYGKTGVRRIVPGQYLGV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DPKGRAVM+GA E+QK VY++NRD+ A LTISSPLEAHKSH++ + + G++ GF+NPIFA
Sbjct: 124  DPKGRAVMVGAVERQKFVYIMNRDSKANLTISSPLEAHKSHSVCFDLVGLEVGFENPIFA 183

Query: 183  AIELDYSEADQ---DSTGQAASEA-QKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            +IE  Y   D    D   +   EA +K ++F+E+DLGLNHV +K + PVD  A+MLV VP
Sbjct: 184  SIEQSYENVDSLQIDLDEELTDEALKKGVSFWEMDLGLNHVVKKVTLPVDLTAHMLVPVP 243

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
                GP GV+VC ENF++YKN  H DV    PRR ++     +LI S A H+ K  FF L
Sbjct: 244  ---GGPGGVIVCCENFLVYKNLDHGDVYCAYPRRLEVSEHAKLLITSYAVHKMKDFFFIL 300

Query: 299  LQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            LQ+EYGD++KV L +D+  V E+ ++YFDT+ +  SMC+L+SGYLF ASEFG+H +YQF 
Sbjct: 301  LQSEYGDLYKVDLNYDDAQVKEIVVRYFDTVELATSMCILRSGYLFVASEFGDHHVYQFT 360

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
             +G++      +S    ++     + F+PR L+NL   +++ SL  I+DM++ ++     
Sbjct: 361  DLGSNEKDPMCTSLHPHSKSAI--IAFKPRVLQNLYETDKLPSLSSIVDMKVVDVMGTGD 418

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNN 478
             +    CGR   S L+ LR GL+  E+A ++LPG P AV+T+K ++   +D +I+VSF  
Sbjct: 419  YEFIMGCGRWYNSRLKSLRYGLSTEELAFNELPGRPRAVFTIK-SLESNYDEFIIVSFQG 477

Query: 479  ATLVLSIGETVEEVSDSGFLDTTPSLAVSL-----------------IGDDSLMQVHPSG 521
             TLVLSIGE VEEV+DS FL +  +L                     + D   +QVH SG
Sbjct: 478  NTLVLSIGEAVEEVTDSFFLTSITTLHSCYMSNYHATESLEGRFEGGVSDGIFVQVHDSG 537

Query: 522  IRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMS 581
             R+      + EW+ P  + +    +N  Q+++ LSGGE++YFE+ +   L EV K  +S
Sbjct: 538  FRY-SHGQVVKEWKVPSTKRVKLADNNLNQLLLVLSGGEVVYFEL-VDNDLEEVAKRNLS 595

Query: 582  GDVACLDIASVPEGR-----KRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPES 636
             ++ C+ +   P  +     ++  F  VGS DN IR+L LD    M    + S ++ PES
Sbjct: 596  TEITCVALQHTPASKAGERVRKGEFCCVGSIDNIIRVLKLDKTLKMCSSQLLSNNALPES 655

Query: 637  LLFLEVQASVGGEDGADHPASL---FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
            L  +  +   G   G+         +L  GL NG+L R  VD + G LSD  SRF+G + 
Sbjct: 656  LALVTAETGSGSGGGSSGGLGESESYLYVGLNNGILIRNNVDSL-GNLSDQESRFMGTKA 714

Query: 694  PKLFSVVVGGRAAMLCLSSRPWLGYIH-----RGRFLLTPL--------SY-ETLEYAAS 739
             KL  V    R  +L ++++ ++   +          + PL        SY  T++   +
Sbjct: 715  VKLKLVHYLQRQCLLLMTTKTYIVIPNYPTNTTNNMEILPLHLTTGSGGSYGTTVDSIDT 774

Query: 740  FSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK--------L 791
            F+S  C+ G V +  N L++F      + F+E+++ L YTPR+ VL P +         L
Sbjct: 775  FNSLLCLNGFVCIMNNNLKIFKCIVNDDVFSESSVDLDYTPRKLVLMPSEAPSAGSLNYL 834

Query: 792  MVIIETDQGALTAEEREAAKKE---------CFEAAGMGENGNGNMDQMENGDDENKYDP 842
            + ++ETD  + + E+ E   KE         CFE                          
Sbjct: 835  LALVETDHNSYSTEQAEEINKELSSITLESDCFELKAA---------------------- 872

Query: 843  LSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLA 902
               + Y   +A   KW SC+R+++P +  T   L   +NEAA +  T   ++K+   LL 
Sbjct: 873  ---KNY---RAGPGKWSSCVRIVNPMNLETVVKLLFTENEAATTAYTCVLNNKQ---LLV 923

Query: 903  VGTAKGLQFWPKRNI--------------------------------------------- 917
            V T K +  +P+  +                                             
Sbjct: 924  VATVKNVHLYPQNKVYGSSGASGANGSYGNSGITGANGTNGSSGSSGFSGSDQGYQDNDE 983

Query: 918  VAGYIHIYRF-------VEEGKSLELLHKTQVEGIPLALCQFQGR-LLAGIGPVLRLYDL 969
            V G I +Y +          G +++LLH T  +G       ++ + LL  IG  LR+Y L
Sbjct: 984  VEGCIRVYEYNSNYSNLATSGMNIKLLHVTNTKGWIRCFNNYENKLLLCAIGTRLRMYAL 1043

Query: 970  GKKRLLRKCENKLFPNT-IVSINTYRDRIYVGDIQESFHFCK---YRRDENQLYIFADDS 1025
            GKK+LL K E++   N   + I     RIY GDI+ES    +   Y  +  +  + A  +
Sbjct: 1044 GKKQLLLKGEHRSLTNYGFMDIKVIGSRIYCGDIRESVQLLRIKFYGEETGEFEMTATST 1103

Query: 1026 VPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNK 1085
             PRWL+    +D+ T+  ADKF +++  R+P +      ED                 N 
Sbjct: 1104 GPRWLSTMELLDYSTVMAADKFDSVFVARVPNN------EDVVRN-------------NY 1144

Query: 1086 MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHM 1145
             E   QFH+ D+VTSL K  L    GE V+Y T++GSLGA + F+S+D+VDF  HLEM +
Sbjct: 1145 FEYQNQFHLSDLVTSLSKVKLNSVYGELVVYSTILGSLGAFVTFTSKDEVDFLQHLEMLL 1204

Query: 1146 RQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKL 1205
              E   L GR+   +RS YFPV++VIDGDLCE +  LS DL+ KIA++L+    E++KKL
Sbjct: 1205 ANELDTLSGREAQMHRSYYFPVQNVIDGDLCELYFNLSSDLKAKIANQLNVKVAEVVKKL 1264

Query: 1206 EEIRNKI 1212
            + IRN++
Sbjct: 1265 KNIRNRV 1271


>gi|414882040|tpg|DAA59171.1| TPA: hypothetical protein ZEAMMB73_269016 [Zea mays]
          Length = 690

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/471 (80%), Positives = 428/471 (90%)

Query: 348 EFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
           EFGNHALYQF+ IG D DVE+SS+TLMET+EGFQPVFFQPR LKNL+RI+++ESLMP+MD
Sbjct: 211 EFGNHALYQFRDIGRDADVESSSATLMETKEGFQPVFFQPRALKNLMRIDEIESLMPVMD 270

Query: 408 MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
           MR+ANLF+EE PQ+FT CGRGPRS+LRILRPGLA+SEMA S LP  P AVWTVKKN+ND 
Sbjct: 271 MRVANLFDEETPQLFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDM 330

Query: 468 FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
           FDAYIVVSF N TLVLSIGET+EEVSDS FLDTT SLAV+L+G+DSLMQVHP+GIRHIRE
Sbjct: 331 FDAYIVVSFTNVTLVLSIGETIEEVSDSQFLDTTHSLAVTLLGEDSLMQVHPNGIRHIRE 390

Query: 528 DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACL 587
           DGR+NEWRTPGK+TI KVGSNRLQVVIALSGGELIYFE+DMTGQL+EVEK +MSGDVACL
Sbjct: 391 DGRVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACL 450

Query: 588 DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
            IA VPEGR+RSRFL VGSYDNTI ILSLDPDDC+Q LSVQSVSS PESLLFLEVQASVG
Sbjct: 451 AIAPVPEGRQRSRFLVVGSYDNTIGILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVG 510

Query: 648 GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
           GEDGAD+PA+LFLNAGLQNGVLFRT VDMVTGQLSD+RSRFLGLRPPKLF  +V  R A 
Sbjct: 511 GEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAK 570

Query: 708 LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGE 767
           LCLSSRPWLGYIH+G FLLTPLS +TLE A+SFSSDQC EGVV+VAG+ALR+FT+ERLGE
Sbjct: 571 LCLSSRPWLGYIHQGHFLLTPLSCDTLESASSFSSDQCSEGVVAVAGDALRIFTVERLGE 630

Query: 768 TFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAA 818
           TFNET +PLRYTPR+FV+ PKKK + +IE+D+GA +AEEREAAKKEC +  
Sbjct: 631 TFNETTIPLRYTPRKFVILPKKKYIPVIESDKGAFSAEEREAAKKECLDGC 681


>gi|320581947|gb|EFW96166.1| hypothetical protein HPODL_2449 [Ogataea parapolymorpha DL-1]
          Length = 1203

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/1245 (35%), Positives = 691/1245 (55%), Gaps = 81/1245 (6%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTK-TPEIVVARGKVLELLR-PENSGRIETLVSTEIF 58
            ++LY+LT++     +    GNF+G +   E+V A    LEL +   N+G    +V+   F
Sbjct: 7    LFLYNLTIRPSVTAVKCCIGNFTGNRRQQEVVRATATTLELWKLNRNNGDFYKVVAQNTF 66

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              IRS+   + +GS KD +++ SDSG + +LE N  K  F+ +  E + K+G RRI PG+
Sbjct: 67   SHIRSIEALKSSGSDKDLLIITSDSGNLTVLEMNNEKGRFESVSNEPYFKTGLRRISPGE 126

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            Y+AVD + RA MI A EK K VY    D  +RL +SSPLEA+KS  + + +CG+D GF+N
Sbjct: 127  YIAVDGRSRAAMISAIEKNKFVYKFTSDHRSRLQVSSPLEANKSKVLTFGVCGMDVGFEN 186

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P FAA+E DYS+ ++    +   +  K L +YELD+GLNHV +K+SE     +N L+ +P
Sbjct: 187  PQFAALECDYSDFEE----KLDKKMHKTLCYYELDIGLNHVVKKYSEEASFSSNFLLPLP 242

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRA-DLPAERGVLIVSAATHRQKTLFFF 297
            GG  GPSGVL+C+E  + YK          IPRR+ D    R   IV    H  K  FF 
Sbjct: 243  GGTQGPSGVLLCSEGIIQYKCLSKMTHTIPIPRRSGDKTRSR---IVCGVVHTLKNSFFA 299

Query: 298  LLQTEYGDIFKVTLEH---DNEH-------VSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            LLQ+E GD+FK+TL++   D++        V+ ++I+YFDT+PV  S+ + ++G+L+A  
Sbjct: 300  LLQSELGDLFKITLDYVVQDSDESRGEAGMVNSMEIQYFDTMPVCTSLLIFRAGFLYANC 359

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETEEGF--QPVFFQPRGLKNLVRIEQVESLMPI 405
            E G+  LYQF  +G +   + SS    +       +   F+PR L+NL  +  VE++ P+
Sbjct: 360  ESGDQYLYQFDKLGDENQRKFSSQDYPDEVAVLSDETTLFEPRPLENLNLVNIVENINPL 419

Query: 406  MDMRIANLFEEEA-PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            +D ++ N  E  + P I++LCG GPRS+L++L   L  SE+   +LP V   V+  K N 
Sbjct: 420  IDAKLYNSNETTSLPVIYSLCGTGPRSALKVLNHELPFSEVVTQELPSVVQKVFVSKLNR 479

Query: 465  NDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
            +DE+D YIV+SF + TLVL IGE VEEV +SG +  T +L V  +G  +L+QVHP+G+R 
Sbjct: 480  DDEYDKYIVLSFVDGTLVLRIGEDVEEVENSGLVLDTNTLGVFQVGSTALVQVHPNGVRQ 539

Query: 525  I----REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-E 579
            +        +  +W  P    ++   +   Q+ IALS  E++YFE+D   +L+E  +H E
Sbjct: 540  VFYVDETPQKTIDWAPPAGIRVLHCSATNSQLAIALSNREIVYFELDDLDKLIEYNEHKE 599

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLF 639
            ++  +  L +  V  G  R  +L V   D T+ + S DP+  ++I+  + +SS   SL+ 
Sbjct: 600  LAAQITALTLGEVQAGTARFPYLLVACQDKTLTVFSTDPESTLEIVGEEILSSAASSLMA 659

Query: 640  LEVQASV------GGEDGADHP----ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFL 689
              ++ +        GED  D P    + L+++ G+++GV  R  +D  TG+LS+ R+++ 
Sbjct: 660  FYMKDTAIVLNKDAGEDDEDEPELATSLLYVHIGMESGVYARLQMDPQTGELSNPRNKYT 719

Query: 690  GLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVE-G 748
            G RP +L  +   G+ A+   S+R +LGY     F +TPL+    ++A SF S+   E G
Sbjct: 720  GPRPVQLSKIEAVGQNAVCIFSARTYLGYTRPSEFKITPLTKPVFQHACSFRSEDIPENG 779

Query: 749  VVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEERE 808
            V++V GN+L + TI++L       ++ LR TP+                           
Sbjct: 780  VLAVYGNSLTIMTIDQLENDTIIESIALRNTPKYMC------------------------ 815

Query: 809  AAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR 868
                +C +  GM     G++D   + ++E        +Q+GYP+A    W SCI+ +   
Sbjct: 816  ----DCTDKNGMMYVLEGDIDTKRDIEEERI---EEYQQFGYPRAPG-AWASCIQTVVVA 867

Query: 869  SANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV 928
              +    ++L D E AF  C VNF  +     LAV +AK  Q  P RN  A YIH+YR  
Sbjct: 868  DKSVVQTIDLGD-ETAFRACWVNFESRPGEPFLAVSSAKNQQLSPPRNDGA-YIHLYRIS 925

Query: 929  EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIV 988
              G +LEL   T+ E + LAL  FQG+LL G    L LYD+G+K+L+++   +L    IV
Sbjct: 926  SNG-TLELFQTTKTEHLSLALTAFQGKLLVGAKNELILYDIGQKQLVKRSSTRLECYEIV 984

Query: 989  SINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
             + T   R+ V D+++S  +  Y+  EN    F DD++ R +T    +D+DT+   DKFG
Sbjct: 985  DLKTQGFRVIVSDVRDSVRYTVYKPLENSFVDFIDDTMQRHVTRTLLLDYDTVVVGDKFG 1044

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP 1108
            NI  +R P+ +S+  +ED  G  +K  + KL+         V ++VGD+ T  QK SL  
Sbjct: 1045 NISVLRCPEQISEMSDEDNHGFLVKMRRTKLDNP-------VNYYVGDMPTFFQKGSLTI 1097

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK 1168
            GG ES+IYG + G +G +    S  +++FF  L+  +  E   L  R+++ ++  Y P K
Sbjct: 1098 GGAESIIYGCLQGQMGCLYPMKSLSEINFFKELQRLIIHEFTSLTDREYLKFKGYYNPPK 1157

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            + IDGDL E++  L  + + +IA ++DR P +I +++ ++R++IV
Sbjct: 1158 NSIDGDLIEEYYRLGPEKRIRIATKMDRLPRDIDRRISDMRSRIV 1202


>gi|150863836|ref|XP_001382447.2| hypothetical protein PICST_54680 [Scheffersomyces stipitis CBS 6054]
 gi|149385092|gb|ABN64418.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 1228

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/1253 (35%), Positives = 701/1253 (55%), Gaps = 77/1253 (6%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSG-TKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIF 58
            +YLY LTL+ P+   +++ G F G  K+ EI+V+    L+LLRP   +G+IE + S    
Sbjct: 8    LYLYHLTLRAPSNFTSSVLGQFLGEKKSQEILVSSVSTLQLLRPNAETGKIEVVASQNTL 67

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G I  + + R+ G+QKD  VV  +SG++V LE++   + F  + QE + K+G  R+ PG+
Sbjct: 68   GVIHKIEKIRIVGTQKDLAVVVGESGKVVFLEFDVDLHRFVPVLQEPYAKTGFGRVNPGE 127

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YLAVDP+ R + +GA E+ KL++ +  D+  ++ +SSPLEAH  HT+  S+  +D  F N
Sbjct: 128  YLAVDPQSRCIFLGAIERNKLIFKVETDSQGKVELSSPLEAHSKHTLTLSVVALDTQFSN 187

Query: 179  PIFAAIELDYSEADQDSTGQ-AASEAQKNLTFYELDLGLNH-VSRKWSEPVDNGANMLVT 236
            P+FAAIE DYS    D   Q  A  +   L +YELD GLNH V +K +  + + A  L+ 
Sbjct: 188  PVFAAIECDYSNYHSDGKVQFDADSSPLLLNYYELDQGLNHIVKKKSTNTIPSSATHLIP 247

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            +P       GV VC +N++IY N      R  +P      +E  V++       +K  FF
Sbjct: 248  LPS---HVGGVFVCCKNYIIYDNLHKNLERLYLPLPLRKDSEYTVVVSHVVHKLKKNNFF 304

Query: 297  FLLQTEYGDIFKVTLEH--DNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
             LLQ+  GD+FKVT+E+  D E + +++I YFDTIPV++S+ +LKSG+LFA     +   
Sbjct: 305  VLLQSSMGDLFKVTVEYNSDKELIEDIQIGYFDTIPVSSSLNILKSGFLFANVLNNDKLY 364

Query: 355  YQFQAIGADPD---VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
            YQF+ +G D +   ++AS       EE      F  + L NL  +E   SL PI D  I 
Sbjct: 365  YQFEKLGDDDENIQLKASPDISSIDEEDRSNRTFTVKALDNLALVEIFTSLSPITDAGIV 424

Query: 412  -NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA 470
             ++    A  +  +      S L+ L  G+  S +  S LP +P+ V T K   +   D 
Sbjct: 425  ESISSGTADSLQQMITASSHSHLKSLVHGIQTSTLVSSPLPIIPTGVLTTKLFADSRSDE 484

Query: 471  YIVVSFNNA--TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR-- 526
            Y+V+S   A  TLVLSIGE VEEV +S F++  P+LAV  +G  S++Q++ +GIRH++  
Sbjct: 485  YLVISSTVASRTLVLSIGEVVEEVENSQFVNDQPTLAVQQVGTSSVVQIYTNGIRHVKHT 544

Query: 527  --EDG------RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT-GQLLEVE- 576
              ED       +I +W  P   TIV   ++R QV+IALS  E+ YFEVD T  QL+E + 
Sbjct: 545  RTEDKEQSISRKITDWYPPAGITIVNASTHREQVIIALSNAEICYFEVDATDDQLIEYQD 604

Query: 577  KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPES 636
            + EMS  +  + I       K++ F  VG  D TI++LSL P +C++ LS+Q++S+   S
Sbjct: 605  RVEMSNSITSIAICE-ETANKKNLFAVVGCSDETIQVLSLQPHNCLETLSLQALSANSTS 663

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            L  L+            +  +  ++ G+ NG+  RT ++ ++G LSD+R ++LG +P  L
Sbjct: 664  LSMLQ------------NDNTTMVHIGMDNGLYVRTSIEEISGNLSDTRIKYLGSKPVTL 711

Query: 697  -FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSS-DQCVEGVVSVAG 754
              + +  G  A+L +SSRPW+ Y +R  F +TPL    +   ASFSS D   EG+V+++ 
Sbjct: 712  SVTKLPNGSKAILAISSRPWICYYNRSEFKVTPLLGVKILKGASFSSEDIGGEGIVALSD 771

Query: 755  NALRVFTIER------LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEERE 808
            N L VFTI +      + +  N   + LRYTPR+ ++    K      +    + A + E
Sbjct: 772  NNLIVFTIGKEDVEFDINQDVNIEKIRLRYTPRKLIIDDDGK-----SSKVNYIYALQSE 826

Query: 809  AAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR 868
               K  F  + +        D  E+  D++ YD      +GY + E DKW SCI+V+D  
Sbjct: 827  YGTKSPFSPSNLNSE-----DDPESEIDQDYYDA-----FGY-ETEVDKWASCIQVVDFE 875

Query: 869  SANTTCLLELQDNEAAFSICTVNFHDKEHGTL--LAVGTAKGLQFWPKRNIVAGYIHIYR 926
            +++    +E   NE+A S+  ++F     G +  L +G     +F  K ++   Y+  ++
Sbjct: 876  NSSIIQTVEFSSNESAISMAKLHFVSSGKGNMEHLIIGVTTDRKFL-KNSVGKSYLFTFK 934

Query: 927  FVE-----EGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
              +       K LE LHKT+++  P  +  F GRLL G+G  LRLYD+G ++LLRK    
Sbjct: 935  IQKNTRKSNKKRLEYLHKTEIDCSPTVMIPFNGRLLVGMGKYLRLYDIGHRQLLRKSSTN 994

Query: 982  L-FPNTIVS-INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD 1039
            + + ++IV  ++T  +RI  GD   S  F K+   EN+   FADD + R +TA   +D+D
Sbjct: 995  IDYISSIVDLVHTGGERIAFGDSHSSIVFAKFDSAENRFVPFADDIMKRQITAVAALDYD 1054

Query: 1040 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVT 1099
            T+ G DKFGN++  R+P  VS + +ED     +K ++  LN +P++ + + +F + D  T
Sbjct: 1055 TVIGGDKFGNVFVSRVPDSVSKKSDED--WSLLKVQESYLNASPSRTKNLCEFFLSDTPT 1112

Query: 1100 SLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP-PLCGRDHM 1158
            S  K S+  GG + +IY  + G++G +L  S++ +V F + LE  +RQ+    L G DH+
Sbjct: 1113 SFTKGSMTIGGHDGIIYTGIQGTVGLLLPLSTKSEVQFINSLEQSLRQQMGFNLLGMDHL 1172

Query: 1159 AYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             +RS Y PVK+VIDGDL E++  LS  L+ KIA EL+RTP E+ KK+ ++RN+
Sbjct: 1173 KFRSYYNPVKNVIDGDLIEKYYELSQSLKIKIARELNRTPKEVEKKISDLRNR 1225


>gi|294654658|ref|XP_456718.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
 gi|218511767|sp|Q6BYK1.2|RSE1_DEBHA RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|199429049|emb|CAG84677.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
          Length = 1256

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/1281 (35%), Positives = 709/1281 (55%), Gaps = 105/1281 (8%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTK-TPEIVVARGKVLELLRPE-NSGRIETLVSTEIF 58
            +YLY+LT++ P+  IA+I G F G K + EI++A    +EL + + N+G++E +     F
Sbjct: 8    LYLYNLTIKHPSSCIASIVGQFLGNKKSQEIILANSTSIELWKADSNTGKLEKIYQQASF 67

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G I+ + + RL G+QKDY+V+ SDSG++V+LE++  K  F  + QE   K+G RR  PG+
Sbjct: 68   GIIQGIDKIRLVGTQKDYVVITSDSGKLVVLEFDIEKLQFVPLFQEPHSKNGLRRTSPGE 127

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YL VDP  RA++IGA EK KLVY +  +   +L +SSPLE    HT+   IC +D GF+N
Sbjct: 128  YLCVDPHNRAILIGAIEKNKLVYKVQSNDEGKLELSSPLETFSKHTLTLQICAMDTGFEN 187

Query: 179  PIFAAIELDYSEADQDS-TGQAASEAQKNLTFYELDLGLNHVSR-KWSEPVDNGANMLVT 236
            P+FAAIE DY+   QD+   + A EA   L +YELD GLNHV + K +E +   ++ L+ 
Sbjct: 188  PMFAAIECDYNARQQDNGEEEDAGEASLLLNYYELDQGLNHVVKHKSNEKIPGSSSHLIP 247

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHR-QKTLF 295
            +P   D   G+LVC+++ +IY +     +   IP R++       LIV+   HR +K  F
Sbjct: 248  LP---DFIGGLLVCSKSTIIYAHPSKDKLYLPIPIRSN---TNETLIVNHVIHRLKKNNF 301

Query: 296  FFLLQTEYGDIFKVTLEHD--NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
            F L+Q++ GD FK+T++HD  NE +  + I YFDTIP++ S+ + KSG+LFA     N  
Sbjct: 302  FILVQSQLGDCFKITIDHDEVNESIENINITYFDTIPLSQSLNIFKSGFLFANVATNNKL 361

Query: 354  LYQFQAIGADPDVEASSSTLMETE-EGFQPVF--------FQPRGLKNLVRIEQVESLMP 404
             YQF+ +G D     +++TL       +  +F        F+  GL+NL  ++ +E+L P
Sbjct: 362  FYQFEKLGDD----NNNTTLQSCNFSDYNSIFELDISKRSFKVAGLENLALVDIMETLNP 417

Query: 405  IMDMRIANLFEEEAPQIFT-LCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            I D  +      E P  F  L      S L+ L  G++ + +  S LP  P+A+ T +  
Sbjct: 418  ITDGALIETLRPEVPDPFKQLTALSSHSYLKTLTHGISTNTVVSSPLPIKPTAIHTTRIF 477

Query: 464  VNDEFDAYIVVS--FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSG 521
                 D Y+V+S   ++ TLVLSIGE VEEV+DS F+   P++ V  +G  S++Q++ +G
Sbjct: 478  AESANDEYLVISSTLSSQTLVLSIGEVVEEVNDSQFVTNEPTINVQQVGKSSVVQIYSNG 537

Query: 522  IRHIRE-------DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD-MTGQLL 573
            IRHI+        + +  +W  P   +I++  +N  QV+I LS  E+ YFE+D    QL+
Sbjct: 538  IRHIKHTMRNDTIEKKYTDWYPPAGISIIQASTNNEQVIIGLSNREICYFEIDPHDDQLV 597

Query: 574  EV-EKHEMSGDVACLDIASVPEGRK---RSRFLAVGSYDNTIRILSLDPDDCMQILSVQS 629
            E  E+ EMSG        S     K   +S +  VG  D TI+ +SL P +C++I+++Q+
Sbjct: 598  EYQERLEMSGGSISALAISSSSISKLQRKSSYAIVGCSDETIQAISLKPHNCLEIVTLQA 657

Query: 630  VSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFL 689
            +S+   S+  +             H  S  ++ G++NG+  R  +D +TG+LSD+R +FL
Sbjct: 658  LSANSSSIAMVP------------HGYSTSVHIGMENGLYVRVTIDEITGKLSDTRIQFL 705

Query: 690  GLRPPKLFSVVVG----GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQ 744
            G +P +L   V+G     +  +L +SSRPW+GY  +G F +TPL    +   ASF S D 
Sbjct: 706  GSKPVQL--SVIGLPQLQQNGLLAISSRPWIGYYSKGDFKMTPLLNTNISNGASFYSEDI 763

Query: 745  CVEGVVSVAGNALRVFTI-----ERLGETFNE----TALPLRYTPRRF-VLQPKKKLMVI 794
              EG+V +  N L + TI     E  G   N+     ++ LRY PR+  V  P    +  
Sbjct: 764  GGEGIVGIDDNNLIILTISNTDGEESGLNVNDDFIINSVKLRYLPRKMNVDSPGDNEISS 823

Query: 795  IETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAE 854
                    +     +            E+ N N+D  E   D++ YD      +G+ ++ 
Sbjct: 824  SSYIYIIESEYGITSPFPVTVLPDNQKESTNENIDTPE--IDQDYYDA-----FGFERSR 876

Query: 855  SDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE--HGTLLAVGTAKGLQFW 912
               W SC+ V+D  +      +EL  NE+A S+C + F  ++  +   L +GT +  +F 
Sbjct: 877  H-SWASCVEVIDFNNQEIVQTIELPKNESAISLCRLQFESQQTKNQEYLIIGTTQDQKFL 935

Query: 913  PKRNIVAGYIHIYRFVE-------EGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLR 965
            P  +    Y++ +   +       + + LE +HKT+++  P A+  F GRLL G+   LR
Sbjct: 936  P-NSYSNNYLYTFTINKSSNKNKSQNEILEFVHKTELDYQPTAIIPFNGRLLVGMSNFLR 994

Query: 966  LYDLGKKRLLRKCENKL--FPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFAD 1023
            LYDLG+++LLRK  + +    N I   +    RI VGD   S  F KY   ENQ   FAD
Sbjct: 995  LYDLGQRQLLRKASSNIEYLKNIIRLTHQGGSRIVVGDSSMSTTFVKYDSTENQFIPFAD 1054

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAP 1083
            D + R +TA   +D+DT+ G DKFGNI+  R+P+ +S + ++D     +++++  LNG+ 
Sbjct: 1055 DIMKRQITALVTLDYDTIIGGDKFGNIFVSRVPETISQQSDKD--WSLLRYQESYLNGSG 1112

Query: 1084 NKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEM 1143
            ++++ I +F++ D+ TS  K SLV GG ES+IY  + G+LG +L  S+ ++V F   L++
Sbjct: 1113 SRLKNICEFYLQDIPTSFTKGSLVMGGKESIIYTGIQGTLGLLLPLSTENEVKFLGDLQL 1172

Query: 1144 HMRQEHP-------------PLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKI 1190
             +R+                 L G+DH+ +RS Y PVK+V+DGDL E+F  LS  ++ +I
Sbjct: 1173 LLRKYFDYNFDDFDKDKNGYNLLGKDHLKFRSYYNPVKNVMDGDLIERFYELSQSMKIRI 1232

Query: 1191 ADELDRTPGEILKKLEEIRNK 1211
              EL+RTP EI KK+ E+R++
Sbjct: 1233 GTELNRTPREIEKKISEMRHR 1253


>gi|448111975|ref|XP_004201977.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
 gi|359464966|emb|CCE88671.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
          Length = 1249

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/1275 (34%), Positives = 711/1275 (55%), Gaps = 100/1275 (7%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTK-TPEIVVARGKVLELLRPE-NSGRIETLVSTEIF 58
            +YLY++TL++P+  I+++ G FSGTK   EI +A    +EL RP  ++G+++ +    +F
Sbjct: 8    LYLYNITLKRPSYAISSVTGQFSGTKKVQEICIATSLTIELWRPNIDTGKLDKICVHNVF 67

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              I+SL + RLTGSQKDY+VV SDSG++ IL+Y+  +N    + QE   K+G RR  PG 
Sbjct: 68   SVIQSLEKVRLTGSQKDYLVVTSDSGKLAILQYDTGRNRLVTVFQEPHSKTGFRRNTPGP 127

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YL  DP+ RA++IGA E+ KL+Y ++ D    + ISSPLE+   HTI  ++C +D G++N
Sbjct: 128  YLLTDPQNRAILIGALERNKLIYKVHSDDKGGMQISSPLESQIRHTITLAMCALDTGYEN 187

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTF--YELDLGLNHVSRK-WSEPVDNGANMLV 235
            P+F AIE +Y   D        S+A + L F  YELD GLNHV R+  +  +   A  L+
Sbjct: 188  PVFVAIEAEYGALDSKEYS-IDSQAHQTLLFTSYELDQGLNHVVRRVVNNKLPISATHLI 246

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLF 295
             +P       GVL+C E++ IY+   +  +    P R     E  V+I       +K+ +
Sbjct: 247  PLPS---PVGGVLICCESYAIYERFDYKRLYLPFPIRQG--TENTVIINHVFQKFKKSNY 301

Query: 296  FFLLQTEYGDIFKVTLEHDN--EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
              L QT+ GD  K +L +++  E + ++ + YFDTIPV+ S+ +L+SG+LFA +  GN  
Sbjct: 302  LILAQTQLGDCLKFSLHYNDEREQLDDITVSYFDTIPVSNSLNILRSGFLFANTAHGNKL 361

Query: 354  LYQFQAIG-ADPDVEASSSTLME--TEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI 410
             YQF+ +G  D D+    S   E  T        F+P+GL+NL  ++ ++SL P+ D  +
Sbjct: 362  FYQFEKLGEEDNDLTLRCSDHYEQMTTIDHSKREFKPKGLENLALVDVMDSLNPVTDATL 421

Query: 411  ANLFEEEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
                  E+P     + TL  R     ++IL  G+ V+++  S LP  PS ++T KK    
Sbjct: 422  LETRMSESPDPLINLVTLSSR----FIKILTHGMPVNQLVTSPLPIHPSLIFTTKKFNES 477

Query: 467  EFDAYIVVS--FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
              D Y+V+S   ++ TLVLSIGE VEEVSDS F+   P++ V   G  S++QV  +GIR 
Sbjct: 478  VNDDYLVISSELSSQTLVLSIGEVVEEVSDSEFVTNQPTIHVQQTGKSSIVQVFSNGIRS 537

Query: 525  IR-------EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT-GQLLEV- 575
            IR       E  +  +W  P   +++K   N  Q++I +S  E+ YFE+D    QL+E  
Sbjct: 538  IRHIKNGDEEIKKTTDWYPPAGISVIKASGNNTQLIIGMSNREVCYFEIDSADDQLIEYQ 597

Query: 576  EKHEMS-GDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPP 634
            E+ E+S G ++ L I S  +  KRS    +GS D TI+++SL   +C+ I+++Q++SS  
Sbjct: 598  ERLEVSGGSISSLAILSSKDPEKRSSHAIIGSSDETIQVVSLKRHNCLSIVALQALSSKS 657

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             S+L +            +H  S++++ G++NG+  RT++D V+G+LSD+R +FLG +  
Sbjct: 658  TSILMI------------NHNDSVYVHIGMENGLYVRTMIDEVSGKLSDTRIKFLGSKSV 705

Query: 695  KLFSVVVGGRA----AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVEGV 749
            +L  + V G +     +L LSSRPW GY   GRF L+PL   +L +  SF + D   EG+
Sbjct: 706  RLSPIKVPGNSGEENGILALSSRPWYGYFAEGRFKLSPLINCSLTHGTSFYAEDISGEGI 765

Query: 750  VSVAGNALRVFTI------------ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET 797
            V ++ + L + TI                + F    + LRY P++ +++   +     E 
Sbjct: 766  VGISESNLVILTIGSSDDDVSDDTKGSFKDDFTSREVKLRYLPKKMIIENNTE-----EN 820

Query: 798  DQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN-GDDENKYDPLSDEQYGYPKAESD 856
            ++  +   E E+  +  F    + E G   +D  ++   D++ YD      +GY + ++ 
Sbjct: 821  NRSWIYVLESESGIRAPFIPTKLAE-GEEIIDNTDDKAIDQDYYDV-----FGY-EHKNG 873

Query: 857  KWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTA-----KGLQF 911
             W SCI+V D +       +E  ++E   S C + F+  +  + L VGT      K  + 
Sbjct: 874  SWASCIQVFDYKLNKIVKTIEFSNDERILSSCEIKFNSSDSSSYLIVGTTRNSFDKNAKH 933

Query: 912  WPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGK 971
            +     VAG  +     +  K+L  +HKT+ E  PLA+ +F  RLL G   +LRLYD+G 
Sbjct: 934  YLYTFKVAGSRNSSHSQKGQKTLLFIHKTESEFAPLAMIEFNNRLLIGTKNLLRLYDIGH 993

Query: 972  KRLLRKCENKL--FPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRW 1029
            K+LLRK  + +  F N I       +RI   D   S  F KY + ENQ +  ADD + R 
Sbjct: 994  KQLLRKASSSIDYFENIIKLAYMGGNRIMAADASMSSTFVKYDQVENQFFPLADDVMKRK 1053

Query: 1030 LTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEI 1089
            +T+   +D+DT+ G DKFGN++  R+P+ +S ++++D   G I+ +   LNGA ++++ +
Sbjct: 1054 ITSMCPLDYDTIVGGDKFGNVFVSRIPEFLSKQVDQD--WGLIRHQDSYLNGAASRLKNL 1111

Query: 1090 VQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR--- 1146
             +F+ GD+ TS  K SL+ G  ES+ Y  +MG++GA++   ++++V FF  LE  +R   
Sbjct: 1112 CEFYSGDIPTSFSKGSLILGSEESIFYTGLMGTVGALIPLVTKNEVQFFIELEAELRSYF 1171

Query: 1147 ----------QEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
                      +    L G+DH+ +RS Y PVK+VIDGDL E+F  +S + + +IA++LDR
Sbjct: 1172 DYNFDNFDEQKNGHNLLGKDHLKHRSYYNPVKNVIDGDLIERFSEVSYNNKIRIANKLDR 1231

Query: 1197 TPGEILKKLEEIRNK 1211
            TP +I KK+ EIRN+
Sbjct: 1232 TPKDIDKKISEIRNR 1246


>gi|448114553|ref|XP_004202604.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
 gi|359383472|emb|CCE79388.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
          Length = 1248

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/1278 (34%), Positives = 713/1278 (55%), Gaps = 107/1278 (8%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTK-TPEIVVARGKVLELLRPE-NSGRIETLVSTEIF 58
            +YLY++TL++P+  I+++ G+FSGTK   EI +A    +EL RP  ++G+++ +    +F
Sbjct: 8    LYLYNVTLKRPSYAISSVTGHFSGTKKVQEICIATSLTIELWRPNIDTGKLDKICVHNVF 67

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              I+SL + RL GSQKDY+V+ SDSG++ IL+Y+  +N F  + QE   K+G RR  PG 
Sbjct: 68   SVIQSLEKIRLMGSQKDYLVITSDSGKLAILQYDTGRNRFITMFQEPHSKTGFRRNTPGA 127

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YL  DP+ RA++IGA E+ KL+Y ++ D    + ISSPLE+   HTI  ++C +D G++N
Sbjct: 128  YLLTDPQNRAILIGALERNKLIYKVHSDDKGGMQISSPLESQTRHTITLAMCALDTGYEN 187

Query: 179  PIFAAIELDYSEAD-QDSTGQAASEAQKNLTFYELDLGLNHVSRK-WSEPVDNGANMLVT 236
            P+F AIE DY   D ++ +    +     LT YELD GLNHV R+  +  +   A  L+ 
Sbjct: 188  PVFVAIEADYGALDSKEHSIDPQAHQSLLLTSYELDQGLNHVVRRVVNNKLPMTATHLIP 247

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            +P       GVL+C E++ IY+   +  +    P R D   E  V+I   +   +K+ + 
Sbjct: 248  LPSPA---GGVLICCESYAIYEPFEYKRLYLPFPIRQD--RENTVIINHVSQKFKKSNYL 302

Query: 297  FLLQTEYGDIFKVTLEHDN--EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
             L QT+ GD  K +L +++  E + ++ + YFDTIPV+ S+ +L+SG+LFA +  GN   
Sbjct: 303  ILAQTQLGDCLKFSLHYNDEREQLDDITVSYFDTIPVSNSLNILRSGFLFANTAHGNKLF 362

Query: 355  YQFQAIGA---DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
            YQF+ +G    D  +  S      T        F+P+GL+NL  ++ ++SL P+ D  + 
Sbjct: 363  YQFEKLGEEGNDLTLRCSDHYEQVTTIDHSKRDFKPKGLENLALVDVMDSLNPVTDATLL 422

Query: 412  NLFEEEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
                 E+P     +FTL  R     ++IL  G+ V+++  S LP  PS ++  KK  N  
Sbjct: 423  ETRTSESPDPLINLFTLSSR----FIKILTHGMPVNQLVTSPLPIHPSLIFATKKFNNSV 478

Query: 468  FDAYIVVS--FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
             D Y+V+S   ++ TLVLSIGE VEEVSDS F+   P++ V   G+ S++QV  +GIR I
Sbjct: 479  NDDYLVISSELSSQTLVLSIGEVVEEVSDSEFVTDQPAIHVQQTGNSSIVQVFSNGIRSI 538

Query: 526  R-------EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD-MTGQLLEV-E 576
            R       E  +  +W  P   ++ K   N  Q++I +S  E+ YFE+D +  QL+E  E
Sbjct: 539  RHIRNGDEEIKKTTDWYPPAGISVTKASGNSTQLIIGMSNREVCYFEIDPVDDQLVEYQE 598

Query: 577  KHEMS-GDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPE 635
            + E+S G ++ L I S  +  +RS    +GS D TI+++SL   +C+ ++++Q++SS   
Sbjct: 599  RLEVSGGSISSLAILSSKDPEQRSAHAIIGSSDETIQVVSLKRHNCLSVVALQALSSKST 658

Query: 636  SLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPK 695
            S+L L             H  S++++ G++NG+   T++D V+G+LSD+R +FLG +  +
Sbjct: 659  SILMLR------------HEDSIYVHIGMENGLYVCTMIDEVSGKLSDTRIKFLGSKSVR 706

Query: 696  LFSVVVGGRA----AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVEGVV 750
            L  + V G A     +L LSSRPW GY   GRF L+PL   +L +  SF + D   EG+V
Sbjct: 707  LSPIKVPGSAGEEDGILALSSRPWYGYFAEGRFKLSPLINCSLTHGTSFYAEDISGEGIV 766

Query: 751  SVAGNALRVFTIER------------LGETFNETALPLRYTPRRFVLQPKKKLMVIIETD 798
             ++ N L + TI                + F    + LRY P++ +++   +     E +
Sbjct: 767  GISENNLVILTIGSSDDDASDDTRGDFKDDFTSREVKLRYLPKKMIIESNSE-----ENN 821

Query: 799  QGALTAEEREAAKKECFEAAGM--GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESD 856
            +  +   E E   +  F    +  GE    N+D  +   D++ YD      +GY + ++ 
Sbjct: 822  RSWIYVLESENGIRAPFGPTKLVEGEEITDNVD--DKAIDQDYYDV-----FGY-EHKNG 873

Query: 857  KWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN 916
             W SCI+V D +       +E  ++E   S C + F+  ++ + L VGT +       +N
Sbjct: 874  SWASCIQVFDYKLNKIVKTVEFFNDERILSSCEIKFNSSDNSSYLIVGTTRN---SLDKN 930

Query: 917  IVAGYIHIYRFV-------EEG-KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYD 968
            I   Y++ ++         ++G K+L  +HKT+ E  P A+ +F  RLL G   +LRLYD
Sbjct: 931  I-RHYLYTFKVTSSRNSHSQKGQKTLLFIHKTESEFAPFAMIEFNNRLLIGTKNLLRLYD 989

Query: 969  LGKKRLLRKCENKL--FPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSV 1026
            +G K+LLRK  + +  F N I       +RI   D   S  F KY + ENQ +  ADD +
Sbjct: 990  IGHKQLLRKASSSIDYFENIIKLTYMGGNRIMAADANISSTFVKYDQVENQFFPLADDIM 1049

Query: 1027 PRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKM 1086
             R +T+   +D+DT+ G DKFGNI+  R+P+ +S + ++D   G I+ +   LNGA +++
Sbjct: 1050 KRKITSMCSLDYDTIVGGDKFGNIFVSRIPEVLSKQADQD--WGLIRHQDSYLNGAVSRL 1107

Query: 1087 EEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR 1146
            + + +F+ GD+ TS  K SL+ G  ES+ Y  +MG++GA++   ++ +V FF  LE  +R
Sbjct: 1108 KNLCEFYSGDIPTSFSKGSLILGSEESIFYTGLMGTVGALIPLVTKSEVQFFIELEAELR 1167

Query: 1147 -------------QEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADE 1193
                         +    L G+DH+ +RS Y PVK+VIDGDL E+F  +S + + +IA++
Sbjct: 1168 GYFDYNFDNFDEQKNGYNLLGKDHLKHRSYYNPVKNVIDGDLIERFSEVSYNNKIRIANK 1227

Query: 1194 LDRTPGEILKKLEEIRNK 1211
            LDRTP +I KK+ EIRN+
Sbjct: 1228 LDRTPKDIDKKISEIRNR 1245


>gi|342888540|gb|EGU87812.1| hypothetical protein FOXB_01669 [Fusarium oxysporum Fo5176]
          Length = 1408

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/924 (41%), Positives = 557/924 (60%), Gaps = 63/924 (6%)

Query: 180  IFA---AIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVT 236
            IFA    +E DYSE+DQDS+GQ ++  +  L +YELDLGLN V RKWSE VD  A++L  
Sbjct: 524  IFARPWTLETDYSESDQDSSGQVSAHVE--LVYYELDLGLNRVVRKWSETVDPTASLLSQ 581

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR----ADLPAERGVLIVSAATHRQK 292
            V GG DGP  VLV AE  + Y +     +R  IPRR     DLP +R   I+    H+ K
Sbjct: 582  VLGGDDGPGSVLVFAEESITYHHLNQDPLRVPIPRRRGATEDLPRKR--TIIGGVMHKLK 639

Query: 293  TL---FFFLLQTEYGDIFKVTLE-HDNE-----HVSELKIKYFDTIPVTASMCVLKSGYL 343
                 FFFLLQTE GD+ K+T + HD+E      V  +KIKYFDT+PV +S+C+LK+G+L
Sbjct: 640  NTADAFFFLLQTEDGDLLKLTFDMHDSEGSLAGEVRRIKIKYFDTVPVASSLCILKTGFL 699

Query: 344  FAASEFGNHALYQFQAIGADPDVEA--SSSTLMETEEG-FQPVFFQPRGLKNLVRIEQVE 400
            F A+EFGNH  YQ + +G D D E   +S        G +QPV+F PR LKNL  +E ++
Sbjct: 700  FVAAEFGNHHFYQIEKLGEDDDAEPVITSDDFSTGPRGAYQPVYFDPRPLKNLALLESID 759

Query: 401  SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
            SL P++D  +A+   E  PQI++  G G RS   +L+ GL ++++A S LPG  S VWT 
Sbjct: 760  SLSPLLDCEVADPTGEGPPQIYSESGNGARSHFWMLKHGLEINKVASSDLPGTVSGVWTT 819

Query: 461  KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPS 520
            +   +D+FD+YI+++ ++ T+V+S+G+ VE+VSDSGFL T  +LA+  IGDD ++Q+H  
Sbjct: 820  RMTRHDKFDSYIILTSSDGTVVMSVGDEVEQVSDSGFLTTVTTLAIQQIGDDGIVQIHSK 879

Query: 521  GIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHE- 579
            GIRH+R  G+INEW  P  R+IV V +N+ Q+ IALS GE++YFEVD  G L E ++ + 
Sbjct: 880  GIRHLRA-GQINEWPAPQHRSIVAVTTNKRQIAIALSSGEIVYFEVDSDGSLAEYDETKV 938

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLF 639
            +S  V CL +  VPEGR RS  L VG  D T+RIL L+PD  ++  S++++++ P +L+ 
Sbjct: 939  ISTTVTCLSLGPVPEGRLRSPLLVVGCEDCTVRILGLNPDSMLESNSIKTLTAVPSALII 998

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
            + ++  +    G      L L+ GL +GV  RT ++ +TG+LSD+++RFLGL+  KLF V
Sbjct: 999  MAMEHPLTSSSG------LCLHIGLSSGVYLRTGMNEITGELSDTQTRFLGLKAIKLFQV 1052

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGR-FLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
             V G+  +L L S+PW+GYI   R F +TPL  E L +A+SFSS+QC EG++++  N L 
Sbjct: 1053 TVKGQTCVLALGSKPWMGYIDPKRGFTMTPLECEELHWASSFSSEQCQEGIIAIHANFLH 1112

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAA 818
            +F++E L       ++PL YTPR FV  P +     IE D   L+ E R           
Sbjct: 1113 IFSVENLHNNVVRKSIPLTYTPRHFVKHPAEPYFYTIEVDNNTLSPELRA---------- 1162

Query: 819  GMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLEL 878
                       Q+   DD      L  E +GYP+    +W SCI ++DP        ++L
Sbjct: 1163 -----------QLLAVDDHGDDKVLPPELFGYPRGNG-RWASCISIIDPIGEQVLQRIDL 1210

Query: 879  QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
            + NEAA SI    F  ++    L VGT K +   P+++   GYIH+YRF + G+ L+ +H
Sbjct: 1211 EGNEAAISIAVAPFTSQDGEIFLLVGTGKDMILNPRQS-SGGYIHVYRFHQNGRELQFIH 1269

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            KT+VE  P+AL  F+ RL  G+G  L +YDLG K+LLRK   +  P  IVS++T  DRI 
Sbjct: 1270 KTKVEEPPMALVAFRDRLAVGLGKDLCIYDLGLKQLLRKAHIEAAPQLIVSLDTQGDRIV 1329

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+Q+      +  +E +L  F DD + RW T    +D++++ G DKFGNI+ VR P+ 
Sbjct: 1330 VGDVQQGMTMVMFNHEEQRLIPFVDDIIARWTTCTTMVDYESVVGGDKFGNIWIVRCPKK 1389

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGA 1082
             S  + +        + +  LNGA
Sbjct: 1390 TSHHVGD--------YARNYLNGA 1405


>gi|340508225|gb|EGR33979.1| splicing factor subunit 130kda, putative [Ichthyophthirius
           multifiliis]
          Length = 983

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/734 (48%), Positives = 502/734 (68%), Gaps = 17/734 (2%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRP-ENSGRIETLVSTEIFG 59
           M LYSLTL QPT I+ AI GNFSG K  E+ VA+GK+LE+L P E +G+++T+ S E+FG
Sbjct: 2   MNLYSLTLLQPTCIVKAIYGNFSGPKAQELAVAKGKILEILSPDEETGKLKTVHSEEVFG 61

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IR+++ FRL G +KDYI++GSDSGRIVIL YN  K  F+K+HQET+GK+GCRRIVPGQY
Sbjct: 62  LIRTISTFRLPGFKKDYIIIGSDSGRIVILNYNKKKGEFEKLHQETYGKTGCRRIVPGQY 121

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           +AVDPKGR  MI A EKQK V++LNR+   +LTISSPLEAHKSHTI Y ICGID G++N 
Sbjct: 122 IAVDPKGRVCMIAALEKQKFVFILNREND-KLTISSPLEAHKSHTICYDICGIDVGYENA 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            FA IE DY E DQ  +       QK LT YELD GLNHV +K SE V   A++L+++PG
Sbjct: 181 QFACIECDYGEKDQKDSPMNNGIIQKQLTIYELDFGLNHVVKKSSENVPESAHLLISIPG 240

Query: 240 GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
           G +GP GV++  E+F+IYK      +    P+R        ++I +   H+QK  FFFLL
Sbjct: 241 GQEGPGGVVIVCEDFLIYKGTKGERI-CQFPKRFSADTNSKIMINTFGFHKQKEFFFFLL 299

Query: 300 QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
           QTE GD+FK+ ++   + V  + ++YFD+IP + S+CV+++GYLFAA E GNH LY+F++
Sbjct: 300 QTELGDLFKLEIQSTKDDVHSISLQYFDSIPPSISICVMRNGYLFAACEKGNHLLYRFKS 359

Query: 360 IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
           IG   + EA+S     T++   PV F PR LKNL +++Q+E+L  I D+++++L  E  P
Sbjct: 360 IG---EKEANSVRTDSTQDQKMPVLFIPRKLKNLQQVDQLENLSAISDIKVSDLTGEGHP 416

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
           QI+TLC  G RSSLRILR GL V+E+A S+LPGVP+ +WT+K   ++ F  YI++SF+  
Sbjct: 417 QIYTLCSAGYRSSLRILRHGLQVNEVAASRLPGVPTGIWTIKSRYDENFSKYIILSFSKQ 476

Query: 480 TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
           TLVLSI + V++V+DSG      ++  +L+ D++++QV P G RHIR D R+ + +T GK
Sbjct: 477 TLVLSISDRVQQVTDSGIDLNKQTIHANLLEDNAIIQVMPDGFRHIRVDKRVQQLKTEGK 536

Query: 540 RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
             IVK  SN+ Q+ I+L GG++IYFE+D  GQL+EV K  +  ++ C+DI  VP GR++S
Sbjct: 537 --IVKAVSNQKQIAISLQGGDIIYFELDYAGQLIEVAKTNLQEEIECMDIGEVPFGRQKS 594

Query: 600 RFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
           +FL+VG  D+++RILSL+ D C+Q +S+Q++    E++  +E++   G E  A+    L+
Sbjct: 595 KFLSVGCSDHSVRILSLENDTCLQKISIQALPGIAENVSLIEMKRGSGLEQEAEQ-YQLY 653

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS-------- 711
           L  GL+NG+L R  VD +TG LSD+R+R L   P +     V G+ A+L L         
Sbjct: 654 LYVGLKNGILLRASVDQITGSLSDTRTRVLSGAPVRTCKYQVQGQPALLALKLIHKTEVD 713

Query: 712 SRPWLGYIHRGRFL 725
             P   + H+G+ L
Sbjct: 714 DIPGSLHAHKGKLL 727



 Score =  302 bits (774), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 139/281 (49%), Positives = 199/281 (70%)

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINT 992
            +L+L+HKT+V+ IP +L   +G+LLAG G  LR YD+GKK+LL+K E K   + I  I T
Sbjct: 703  ALKLIHKTEVDDIPGSLHAHKGKLLAGCGTFLRYYDIGKKKLLKKSEVKGLQSPINGIQT 762

Query: 993  YRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
            + DRI+V  + ++ H  K+++ E   Y   DD +PRW++A   +D+ T  G DKF N++ 
Sbjct: 763  FGDRIFVSMVGDAVHIMKHKQKEQTFYEVCDDVLPRWMSAFQVLDYSTYIGGDKFENMFV 822

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
             R+PQ+  +E++E+P   K++WE G LNGAP K E+I QF+VG+VVT+ QKA LV  G E
Sbjct: 823  CRIPQNAEEEMDENPMSYKLRWESGYLNGAPYKTEQICQFYVGEVVTTFQKACLVSTGNE 882

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
             +IYGT MGS+GA   F +++D+DFF HLEM++R +  PL GRDH+ +R+ Y PVK VID
Sbjct: 883  CIIYGTSMGSIGAFYPFQTKEDIDFFVHLEMYLRIDVLPLAGRDHVMFRAFYGPVKSVID 942

Query: 1173 GDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            GDLCEQF  +    Q+ +A+E++RTP E+ KKL+EIRNKI+
Sbjct: 943  GDLCEQFMRIGQGKQKVLAEEMERTPAEVHKKLDEIRNKIL 983


>gi|149038189|gb|EDL92549.1| splicing factor 3b, subunit 3 (predicted) [Rattus norvegicus]
          Length = 650

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/657 (51%), Positives = 460/657 (70%), Gaps = 21/657 (3%)

Query: 566  VDMTGQLLE-VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQI 624
            +D +GQL E  E+ EMS DV C+ +A+VP G +RSRFLAVG  DNT+RI+SLDP DC+Q 
Sbjct: 1    MDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQP 60

Query: 625  LSVQSVSSPPESLLFLEVQASVGGEDGADHPAS------LFLNAGLQNGVLFRTVVDMVT 678
            LS+Q++ + PESL  +E+    GG +  D          L+LN GLQNGVL RTV+D VT
Sbjct: 61   LSMQALPAQPESLCIVEM----GGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVT 116

Query: 679  GQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAA 738
            G LSD+R+R+LG RP KLF V + G+ A+L +SSR WL Y ++ RF LTPLSYETLE+A+
Sbjct: 117  GDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFAS 176

Query: 739  SFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETD 798
             F+S+QC EG+V+++ N LR+  +E+LG  FN+ A PL+YTPR+FV+ P+   ++IIETD
Sbjct: 177  GFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETD 236

Query: 799  QGALT----AEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAE 854
              A T    A+ ++   +E  EAAG  E      +      +EN    L +  +G PKA 
Sbjct: 237  HNAYTEATKAQRKQQMAEEMVEAAGEDERELA-AEMAAAFLNEN----LPESIFGAPKAG 291

Query: 855  SDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPK 914
            + +W S IRV++P   NT  L++L+ NEAAFS+    F +      + VG AK L   P 
Sbjct: 292  NGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILSP- 350

Query: 915  RNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL 974
            R++  G+++ Y+ V  G+ LE LHKT VE +P A+  FQGR+L G+G +LR+YDLGKK+L
Sbjct: 351  RSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKL 410

Query: 975  LRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAH 1034
            LRKCENK   N I  I T   R+ V D+QESF + +Y+R+ENQL IFADD+ PRW+T A 
Sbjct: 411  LRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTAS 470

Query: 1035 HIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHV 1094
             +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W++G LNGA  K E I+ +HV
Sbjct: 471  LLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHV 530

Query: 1095 GDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCG 1154
            G+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +D DFF H+EMH+R EHPPLCG
Sbjct: 531  GETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCG 590

Query: 1155 RDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            RDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 591  RDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTR 647


>gi|260947152|ref|XP_002617873.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
 gi|238847745|gb|EEQ37209.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
          Length = 1242

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/1270 (34%), Positives = 700/1270 (55%), Gaps = 124/1270 (9%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSG-TKTPEIVVARGKVLELLRPEN-SGRIETLVSTEIF 58
            ++LY+LTLQ P+    ++ G FSG  KT E+V+A    +E+ RP+   G++  L+    F
Sbjct: 35   LFLYNLTLQPPSSAHKSLVGQFSGQKKTQELVLATSTTIEIYRPDTEKGKLRKLMVQHAF 94

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              ++++ + RLTG+QKD +++ SDSG++V+ E+N + + F  I QE   K+G RR+ PG+
Sbjct: 95   AIVQNIDKIRLTGTQKDLLIITSDSGKVVVAEFNEALSKFVPIVQEPHSKNGLRRVTPGE 154

Query: 119  YLAVDPKGRAVMIGACEKQKLVY-VLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            YL V+P  RAVMI A E+ KLVY V  ++ +  L +SSPLE    +T+  ++C +D  ++
Sbjct: 155  YLCVEPDNRAVMIAAVERNKLVYKVEMQNESGILKLSSPLENTSKNTLTLNLCALDTNYE 214

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
            NP++AAIE+DYS  +       +S  Q  L +YELD  LNH+  K S+P +D  AN+L+ 
Sbjct: 215  NPLWAAIEIDYSNYENREYDSQSSPLQ--LNYYELDQSLNHIILKKSKPDIDASANLLIP 272

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQ-GHPDVRAVIPRRADLPAERGVLIVSAATHR-QKTL 294
            +P       GVL+C ++++IY++  G        P R+D      V+I +   H+ +K  
Sbjct: 273  LPAPA---GGVLICCKSYLIYESTPGGTRKYLQFPVRSDTSE---VVITNFYVHKLKKKE 326

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
            FF L+Q+  GD+FK+T+  + E ++     YFDTIPV  S+ +  SG+LFA S   N   
Sbjct: 327  FFVLVQSSLGDLFKITVSIEGETLTAFYATYFDTIPVCTSLNIFNSGFLFANSTDNNKFF 386

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
            YQF+++G   D   ++S++ E  +     FF  RGLKNL  +E + SL P++D  +   +
Sbjct: 387  YQFESLGEADD--TTTSSVSEKSDFPTKTFFDSRGLKNLSLVEVLGSLSPLVDSTMLETY 444

Query: 415  EEEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV---KKNVNDE 467
              E P    Q+ TL      S ++ L  G+ VSE+  S +P  P++++T    KK++ND+
Sbjct: 445  SSEFPDPLKQLVTLAS---NSYMKTLTYGVPVSELVSSPVPINPTSIFTTKISKKSINDD 501

Query: 468  FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
            +   +  S    ++VLSIGE VEEVSDSGF     ++AV  IG  SL+QVH +GIRHIR 
Sbjct: 502  Y-LVLTSSLTMKSMVLSIGEVVEEVSDSGFALDQHTIAVQQIGQHSLVQVHNNGIRHIRN 560

Query: 528  ---------DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD-MTGQLLEV-E 576
                       R   W  P    I+   +N  QV++ LS  E+ YFE+D    QL+E  E
Sbjct: 561  FFDDSDNVTSKRETNWYPPAGIVILHASTNNEQVLVGLSNREVCYFEIDPADDQLIEYQE 620

Query: 577  KHEMS-GDVACLDIAS--VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP 633
            + E++ G +  L +AS  V EG ++S F  +G+ + TI+++SL P  C +I+++Q++S+ 
Sbjct: 621  RLEVTGGSITALALASKFVTEGDRKSNFAVIGTSEETIQVISLLPKTCFEIVTLQALSAN 680

Query: 634  PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
              SLL + +              + F++ G+ NGV  R  +D+V+G+L DSR ++LG +P
Sbjct: 681  CFSLLMMPLDKD-----------NYFVHIGMINGVYARVRIDVVSGKLGDSRLKYLGTQP 729

Query: 694  PKLFSVVVGGRAA--MLCLSSRPWLGYIHR-GRFLLTPLSYETLEYAASF-SSDQCVEGV 749
              L S+ +   A+  +L +SSRPW+GY +    F LTPL   +++  ++F S D  +E V
Sbjct: 730  VSLRSLALPNVASSGILAISSRPWIGYFNNESNFKLTPLIDISIKDGSAFYSEDIGIESV 789

Query: 750  VSVAGNALRVFTI-ERLGETFNET------ALPLRYTPRRFVLQPKKKLMVIIETDQGAL 802
            V +    + +FT+    GE F+ T      ++ LRY PR+ +         +IE++ G +
Sbjct: 790  VGIRDGEITIFTVGGEEGEGFDVTNDLTISSIKLRYAPRKQLKDSLTDYFFVIESEFGVI 849

Query: 803  TAE-EREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSC 861
            +   E +    E FE                               +GY K E + W SC
Sbjct: 850  SPYLESKEVDAEYFEV------------------------------FGYKKKE-NSWASC 878

Query: 862  IRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGY 921
            ++++D   +      E  +NE   S+ ++   D+E+   L VGT + L + P        
Sbjct: 879  LQIVDVAGSGIEYTHEFTNNECTISLASIKIRDEEY---LIVGTTENLVYSPHY-YSGNS 934

Query: 922  IHIYRFVEEGKS---LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC 978
            I+ +R     K    L  LHKT +E  P +LC F  +LL G G  LRLYD+G+K+LLRK 
Sbjct: 935  IYTFRIKRNAKKKPELVYLHKTTIEFPPSSLCAFNEKLLVGAGNQLRLYDVGRKQLLRKT 994

Query: 979  ENKLFPNTIVSINTYR----DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAH 1034
              K+  + +  IN  +    D I V D  ES  F ++ + +NQ   F +D+  R +TA  
Sbjct: 995  STKI--DFLRRINKIQHIAGDVIVVCDSSESVSFMRFDQTKNQFIAFCNDTAKRQITALE 1052

Query: 1035 HIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHV 1094
             +D  T+   D+FGNI+  R+P++V++++E +     +K+E+  L  + ++++++  F+ 
Sbjct: 1053 VLDSRTVIAGDRFGNIFVSRIPKNVAEQLENNVL---MKFEEETLGASSSRLDKLCDFYT 1109

Query: 1095 GDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR-------- 1146
             D+VTSL K S V GG ES+IY  + G++G +L  ++  +VD    LE  +R        
Sbjct: 1110 QDIVTSLHKGSFVVGGSESIIYTGLQGTVGILLPLATTQEVDLLMKLENSLRDYFNDSFD 1169

Query: 1147 -----QEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEI 1201
                 ++   L GR+H+ +R  Y PV++VIDGD  E+F  L+   Q K+A  LD++P +I
Sbjct: 1170 DFDNTKQGFNLVGREHLKFRGYYNPVENVIDGDFIERFFELNPSAQVKLAGRLDKSPRDI 1229

Query: 1202 LKKLEEIRNK 1211
             +K+ ++RN+
Sbjct: 1230 ERKIYDLRNR 1239


>gi|119572189|gb|EAW51804.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_b [Homo sapiens]
          Length = 635

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/642 (51%), Positives = 450/642 (70%), Gaps = 20/642 (3%)

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLF 639
            MS DV C+ +A+VP G +RSRFLAVG  DNT+RI+SLDP DC+Q LS+Q++ + PESL  
Sbjct: 1    MSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCI 60

Query: 640  LEVQASVGGEDGADHPAS------LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
            +E+    GG +  D          L+LN GLQNGVL RTV+D VTG LSD+R+R+LG RP
Sbjct: 61   VEM----GGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRP 116

Query: 694  PKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVA 753
             KLF V + G+ A+L +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++
Sbjct: 117  VKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAIS 176

Query: 754  GNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREA 809
             N LR+  +E+LG  FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++ 
Sbjct: 177  TNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQ 236

Query: 810  AKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS 869
              +E  EAAG  E      +      +EN    L +  +G PKA + +W S IRV++P  
Sbjct: 237  MAEEMVEAAGEDERELA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQ 291

Query: 870  ANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVE 929
             NT  L++L+ NEAAFS+    F +      + VG AK L   P R++  G+++ Y+ V 
Sbjct: 292  GNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVN 350

Query: 930  EGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVS 989
             G+ LE LHKT VE +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  
Sbjct: 351  NGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISG 410

Query: 990  INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGN 1049
            I T   R+ V D+QESF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGN
Sbjct: 411  IQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGN 470

Query: 1050 IYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPG 1109
            I  VRLP + +DE++EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PG
Sbjct: 471  ICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPG 530

Query: 1110 GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKD 1169
            G ES++Y T+ G +G ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+
Sbjct: 531  GSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKN 590

Query: 1170 VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            VIDGDLCEQF ++  + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 591  VIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTR 632


>gi|147854459|emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/514 (69%), Positives = 381/514 (74%), Gaps = 85/514 (16%)

Query: 462 KNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSG 521
           KNVN       VVSF NATL+ SIG+ VE+VSDSGFLDTT SLAVSLIGDDSLMQ+H SG
Sbjct: 56  KNVN-------VVSFANATLMPSIGDEVEKVSDSGFLDTTLSLAVSLIGDDSLMQIHNSG 108

Query: 522 IRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMS 581
           IRHIRE  RINEWRTPGKRTIVKVGSNRLQV  A SGGELIYFE+DMTG           
Sbjct: 109 IRHIREGRRINEWRTPGKRTIVKVGSNRLQVAFAPSGGELIYFEMDMTG----------- 157

Query: 582 GDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE 641
                         R+RSRFLAVGS DNTIR LSLDPDDCMQIL +QSVSSPPESLLFLE
Sbjct: 158 --------------RQRSRFLAVGSCDNTIRSLSLDPDDCMQILGLQSVSSPPESLLFLE 203

Query: 642 VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
           VQA VGGEDGADHPAS                      QLSDS SRFLGLR  KLFSV+V
Sbjct: 204 VQALVGGEDGADHPAS----------------------QLSDSCSRFLGLRDLKLFSVIV 241

Query: 702 GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
            GR AMLCLSS PWLGYIHRG FLLT LS ETL++AASFSSDQC EGVV VAG+ALRVF 
Sbjct: 242 RGRRAMLCLSSSPWLGYIHRGHFLLTLLSCETLKFAASFSSDQCAEGVVVVAGDALRVFI 301

Query: 762 IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
           IERLGE FNET +PL            KKL+V+IE+DQGA   EE EAAKKECFEAAGMG
Sbjct: 302 IERLGEPFNETVIPL-----------SKKLLVVIESDQGAFATEEHEAAKKECFEAAGMG 350

Query: 822 ENGNGNMDQMENG-DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
           ENGNGN+DQMENG +DE+K DPLSDEQYGYPKAESDKWVSCIR+LDPR+A TTCLLELQD
Sbjct: 351 ENGNGNVDQMENGGEDEDKDDPLSDEQYGYPKAESDKWVSCIRILDPRTACTTCLLELQD 410

Query: 881 NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
           NEAAFSICTVNFHDKE+GTLLAV T K  QFWPKR+  AGYIH Y               
Sbjct: 411 NEAAFSICTVNFHDKEYGTLLAVDTPKSPQFWPKRSFDAGYIHNY--------------- 455

Query: 941 QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL 974
               +PLALCQ QGR LA I  +LRLYDLGK RL
Sbjct: 456 ----VPLALCQLQGRFLARIRSMLRLYDLGKGRL 485


>gi|254572247|ref|XP_002493233.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
 gi|238033031|emb|CAY71054.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
 gi|328352752|emb|CCA39150.1| Pre-mRNA-splicing factor rse1 [Komagataella pastoris CBS 7435]
          Length = 1179

 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/1241 (34%), Positives = 672/1241 (54%), Gaps = 100/1241 (8%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTP-EIVVARGKVLELLRPEN-SGRIETLVSTEIF 58
            + LY L+L++P+  + ++ G+F+G K+  E++VA    L +   +  +G++      E+F
Sbjct: 8    LVLYHLSLKRPSASVKSVIGSFTGHKSKQELIVALHSSLIVYSLDTETGQLHKEREHELF 67

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              ++++A+FR+ GS +  +++ SDSG I +   N  K  F+ +      K+G RR+ P  
Sbjct: 68   CIVQNIAKFRIPGSIQHCLIITSDSGNITLTRLN-EKIEFESLVNHPLTKTGLRRLNPSC 126

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAAR-LTISSPLEAHKSHTIVYSICGIDCGFD 177
            Y+AVDPK R+ M+ A EK K++ VLNR++    + ISSPLEA+ S  + +  C +D G+D
Sbjct: 127  YIAVDPKNRSFMLCALEKNKMITVLNRNSEDNTIKISSPLEANISKVVTFYTCALDVGYD 186

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTV 237
            NP+ A IE +Y            S  +K L++YELDLGLNHV +K++E +   +N L+++
Sbjct: 187  NPLTATIECNYD-----------SPTKKYLSYYELDLGLNHVVKKYTEEIPFKSNFLISI 235

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
            P   +GPSG+L+C++  + +K          IP+R +   +    I++   H+ K  FFF
Sbjct: 236  PRDAEGPSGLLLCSQGIIQFKFLNKRTHCLPIPKRKN--QKELSYIINGECHKMKNSFFF 293

Query: 298  LLQTEYGDIFKVTLEH--------DNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            LLQ++ GDIFKV++ +        D + VS ++IKYFD++PV   + + KSG+LFA +E 
Sbjct: 294  LLQSDLGDIFKVSVTYQEVQDDTYDTKEVSSIEIKYFDSLPVCLDLHIFKSGFLFADTET 353

Query: 350  GNHALYQFQAIGADPDVEASSSTLMETEEGF---QPVFFQPRGLKNLVRIEQVESLMPIM 406
            G+  LYQF+ +G D D    SS     EE       ++F  + L NL  +  ++ L PI 
Sbjct: 354  GDKYLYQFEKLGDDDDGTIWSSENYPDEESVYEDHHIYFDTKELDNLSLVYILDCLNPIT 413

Query: 407  DMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
            D     L ++E  Q+    G   RSSL++L+  LA++E+A S+LPG    ++T K +  D
Sbjct: 414  D----GLLDQEKSQLVLTSGGSSRSSLKLLKHELAINELASSELPGSALNIFTTKVSHKD 469

Query: 467  EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
            ++D Y+V+SF + TLVLSIGE+V+EVSDSG      ++AV  +G +SL QVH  GI H++
Sbjct: 470  QYDKYMVISFIDGTLVLSIGESVDEVSDSGLELQVSTIAVQQVGRNSLAQVHSHGIVHLK 529

Query: 527  EDGRINE-------WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKH 578
                +NE       W+ P    I+       Q+ + LS  EL+YFE+D   QL+E  E+ 
Sbjct: 530  ---GLNEPSFEKSLWQPPVGAEILVASMTNSQIALGLSNRELVYFEIDEYDQLIEHKERK 586

Query: 579  EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLL 638
            EMSG ++ L +  +P+GR RS FLAVG  D TI+ILS DP+ C+++LS+Q++SS P  L 
Sbjct: 587  EMSGRISALSLGQIPDGRLRSPFLAVGCNDMTIKILSTDPNSCLEVLSLQALSSIPSDLQ 646

Query: 639  FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
               ++   G           F++ GL +G+  RT+++ ++GQLSD+R  +LG +   L  
Sbjct: 647  ITNLEQGAG----------YFVHIGLDSGIYIRTLLNRISGQLSDTRVNYLGPKRVSLSP 696

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVE-GVVSVAGNAL 757
            V + G+  +L  S   +L Y       +TPL      Y   F S++C E GVV V+   L
Sbjct: 697  VKIFGKNLVLAFSDTSYLSYNSGFDAKITPLCDGKFTYGCGFISEECPENGVVGVSAENL 756

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
             +FTI++L    N   +PL +TPRR  L   + ++V+ E+            A +E  E 
Sbjct: 757  TIFTIDQLDTDMNVKDIPLTFTPRRITL-VSEDVVVVTESQHYTKNPYLNSVATEESREL 815

Query: 818  AGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
                                        +Q GY K  S  W S I  +D +S      + 
Sbjct: 816  Y---------------------------QQIGYEK--SSHWSSVIETVDIQSQQVIQAIN 846

Query: 878  LQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAG-YIHIYRFVEEGKSLEL 936
            L    A F    V+F          V  +   +  P  NI  G  +  Y+  EEG  L+ 
Sbjct: 847  LDKELAIFGSTKVSFASHPDEVYFIVSCSVEQELLP--NINKGTQLRTYKITEEG--LQF 902

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDR 996
            LH T+ + +  +L +FQG+LLAG+G +L LYDLG K+LL+K   +   + I SI+    R
Sbjct: 903  LHSTETDQLVYSLTEFQGKLLAGVGNLLVLYDLGLKKLLKKSLTQTSFHQITSIDYQGFR 962

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I + D+++S  F  +  +EN+     DD   R +T +  +D+ T+   D+FG I  +R P
Sbjct: 963  IVISDMKQSSMFLSFNAEENRFISLCDDITQRHITCSKMLDYSTVVTGDRFGTISVLRCP 1022

Query: 1057 QDVS-DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI 1115
            + V+ D ++      K+  E       P K++++  ++V DVVTSL + SL  GG +S+I
Sbjct: 1023 EKVNKDHLDYIEAKSKMIGE------CPFKLKQLASYYVQDVVTSLSRGSLTVGGKQSII 1076

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQE----HPPLCGRDHMAYRSAYFPVKDVI 1171
            Y  + G++G +    +  D+DFF  LE  +RQE       L GR H+ YR  Y P + V+
Sbjct: 1077 YTGLQGTIGILSPIQTPSDIDFFVSLEDSLRQELLKSKHLLTGRSHLKYRGYYVPAQGVV 1136

Query: 1172 DGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            DGDL + F  L    ++ I+ +LDR+  EI +K+  +R+ +
Sbjct: 1137 DGDLIQYFYQLPDSTKQFISTKLDRSTLEIERKISIMRSLV 1177


>gi|322700233|gb|EFY91989.1| Pre-mRNA-splicing factor rse-1 [Metarhizium acridum CQMa 102]
          Length = 1039

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/638 (52%), Positives = 437/638 (68%), Gaps = 20/638 (3%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           M+LYSLT+Q PT +  AI G FSGTK  +IV A G  L L RP+ NSG+I  L+S ++FG
Sbjct: 7   MFLYSLTIQPPTSVTQAIIGQFSGTKEQQIVTASGPRLNLYRPDINSGKIIKLLSHDVFG 66

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRS+A FRL GS KDYI++ SDSGRI I+EY P+KN F +IH  TFGKSG RR++PGQY
Sbjct: 67  IIRSIAAFRLAGSSKDYIILASDSGRIAIVEYAPTKNSFSRIHLATFGKSGVRRVIPGQY 126

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LA DPKGRA +I + EK KLVYVLNR+  A LTISSPLEAHK   +V+S+  +D G+  P
Sbjct: 127 LAADPKGRACLIASIEKNKLVYVLNRNAEAELTISSPLEAHKHGILVFSVVSLDVGYATP 186

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FAA+E DY+EA+QD +    +E +  L +YELDLGLNHV RKWSE VD  +++L  VPG
Sbjct: 187 VFAALEADYTEAEQDDS----AEVEIQLVYYELDLGLNHVVRKWSEVVDPTSSLLFQVPG 242

Query: 240 GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRR--ADLPAERGVLIVSAATHRQK---TL 294
           G DGPSGVLVC E  V Y++      R  IPRR  A    +R  +IVS   H+ K   + 
Sbjct: 243 GSDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRRGATEDPQRRRIIVSGVMHKLKGSTSA 302

Query: 295 FFFLLQTEYGDIFKVTLEHDNE-------HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
           FFFLLQT+ GD+FKVTL+   +        V+ +KIKYFDTIPV+ S+C++KSG+LF A 
Sbjct: 303 FFFLLQTDDGDLFKVTLDMAEDADGNLTGEVTRIKIKYFDTIPVSNSICIMKSGFLFTAG 362

Query: 348 EFGNHALYQFQAIGADPDVEASSSTLMET--EEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
           EFGN+  YQF+ +G D D    +S    T  +  + PV+F PR L+NL  +E V S+ P+
Sbjct: 363 EFGNYQFYQFEKLGDDDDETEFTSDDFPTDYQASYHPVYFHPRPLENLTLVESVSSMAPL 422

Query: 406 MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
           MD +I     E+  QI+  CG G RS+LRILR GL V+E+  S+LPG PSAVWT K   +
Sbjct: 423 MDCKILTQAGEDISQIYAACGNGARSTLRILRHGLEVNELVASELPGTPSAVWTTKLTQS 482

Query: 466 DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
           D++DAYI+++F + T+VLS+GETV +V+DSGF+ T  +LAV  IG +SL QV+  GIRHI
Sbjct: 483 DDYDAYIILTFLHDTMVLSVGETVTQVTDSGFITTVATLAVQQIGKNSLFQVYSKGIRHI 542

Query: 526 REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVA 585
            + G+  EW  P  RTIV   +N  QV IALS GE++YFEVD  G L E ++ +  G V 
Sbjct: 543 -QSGQFTEWPVPQHRTIVAAATNERQVAIALSSGEIVYFEVDEDGSLAEFDERKEIGSVT 601

Query: 586 CLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQ 623
            L +  VPEGR RS FLAVG  D T+RILSL+P+  ++
Sbjct: 602 SLGLGPVPEGRLRSPFLAVGCDDCTVRILSLEPESTLE 639



 Score =  303 bits (776), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 155/386 (40%), Positives = 237/386 (61%), Gaps = 8/386 (2%)

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL--LELQDNEAAFSI 887
             + NGD   K+ P  D  +G P+ +  +W SC+ +++P +   + L  + L+ NEA  S 
Sbjct: 659  NVTNGD--AKHLPPGD--FGLPRGKG-RWASCVSIINPVADAPSVLDRVHLEGNEAGVSA 713

Query: 888  CTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
              V F  ++  + L +GT K +   P+++   G+IH+YRF ++G+SLE +HKT+VE  P 
Sbjct: 714  AVVPFTSQDGESFLIIGTGKDMIVNPRQS-SEGFIHVYRFHDDGRSLEFIHKTKVEEPPT 772

Query: 948  ALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFH 1007
            AL  F GRLLAGIG  LR+YDLG ++LLRK +  + P  IVS+ +   RI VGD+Q    
Sbjct: 773  ALLSFHGRLLAGIGKTLRIYDLGMRQLLRKAQADISPQHIVSLQSQGFRIVVGDVQHGVT 832

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDP 1067
               Y    N+L  F DD++ RW T     D++++AG DKFGNI+ VR P   S E +E  
Sbjct: 833  MVVYNPVSNKLLPFVDDTIARWTTCLAMADYESVAGGDKFGNIWIVRCPDKASAEADEPG 892

Query: 1068 TGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAML 1127
            +  ++   Q  L+GA ++++ +    V D+ TS+ K SLV GG + +++  + G++G ++
Sbjct: 893  SDVQLSNGQSYLHGAAHRLQLMAHMFVQDIPTSICKTSLVVGGQDVLLWSGLQGTIGVLI 952

Query: 1128 AFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQ 1187
               +R+  DFF  LEMHMR E PPL GRDH+ YR  + PVK VIDGDLCE+F  LS + +
Sbjct: 953  PLVTRETADFFQTLEMHMRNEDPPLAGRDHLMYRGYHVPVKGVIDGDLCERFSLLSREKK 1012

Query: 1188 RKIADELDRTPGEILKKLEEIRNKIV 1213
            + IA ELDR+  E+ +++ ++R + V
Sbjct: 1013 QMIAGELDRSVREVERRISDVRIRSV 1038


>gi|402588688|gb|EJW82621.1| splicing factor 3b [Wuchereria bancrofti]
          Length = 601

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/591 (56%), Positives = 429/591 (72%), Gaps = 33/591 (5%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGT-KTPEIVVARGKVLELLRPE-NSGRIETLVSTEIF 58
           MYLY+LTLQ  + I  AI+G+F G  K  E+ +ARG +L+LL  +  +G+I  L S   F
Sbjct: 31  MYLYNLTLQGSSAINQAIHGSFCGLPKQQEVCIARGNLLQLLFCDPKTGKIHVLCSHNAF 90

Query: 59  GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
           G IRSL  FRLTG  KDYIV+GSD+GRIVILEYN  K  F+++HQETFGK+GCRRIVPGQ
Sbjct: 91  GIIRSLLAFRLTGGSKDYIVIGSDAGRIVILEYNAQKVCFERVHQETFGKTGCRRIVPGQ 150

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
           +LAVDPKGRA++IGA E+QKLVY++NRD +A LTISSPLEAHKSH I YS+ G+D GF+N
Sbjct: 151 FLAVDPKGRAILIGAVERQKLVYIMNRDASANLTISSPLEAHKSHCICYSVVGVDVGFEN 210

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
           P FA +E+DY E D D TG  A++  + LTFYELDL                      VP
Sbjct: 211 PTFACLEVDYEEVDHDPTGHLATKIPQTLTFYELDL----------------------VP 248

Query: 239 GGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADL--PAERGVLIVSAATHRQKTLF 295
           GG DGPSGV+VC EN+++YKN G  PD++  +PRR +     +R V+IV AATH+ K ++
Sbjct: 249 GGQDGPSGVIVCCENYLVYKNLGDQPDIKCPVPRRRNELDDCDRTVIIVCAATHKTKLMY 308

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           FFL+QT+ GDIFKVTLE +++ V+ELKIKYFDTIPV+ +MC+LK+G+LF ASEFGNH LY
Sbjct: 309 FFLVQTDQGDIFKVTLESEHDIVTELKIKYFDTIPVSNAMCILKTGFLFTASEFGNHHLY 368

Query: 356 QFQAIGADPDVEASSSTLMETEEG--FQPVFFQPRGLKNLVR-IEQVESLMPIMDMR--I 410
           Q   +G D D E   S+ M+ EEG  F  +    +  + L R I      +P   +   I
Sbjct: 369 QIAHLG-DEDDEPEFSSRMQLEEGETFFLLLVGSQIWQLLTRWIAYHRLFLPTFKVHCMI 427

Query: 411 ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA 470
            +L  E++PQI+TL GRG  S++++LR GL V+EMAVS+LPG P+AVWTVK+N++D+FD+
Sbjct: 428 DDLANEDSPQIYTLVGRGALSAVKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKFDS 487

Query: 471 YIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR 530
           +IVVSF NATLVLSIGETVEEV+DSGFL TTP+L  +LIGDD+L+QV+P GIRHIR D R
Sbjct: 488 HIVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIRADRR 547

Query: 531 INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMS 581
           +NEW+ PGKRTI+K   NR QV IAL+GGEL+YFE+D+    L    H  +
Sbjct: 548 VNEWKAPGKRTIMKCALNRRQVAIALAGGELVYFELDVVRCFLPYLFHRFA 598


>gi|114318675|gb|ABI63336.1| putative splicing factor 3b [Hordeum vulgare subsp. vulgare]
          Length = 379

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/379 (82%), Positives = 344/379 (90%), Gaps = 3/379 (0%)

Query: 536 TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEG 595
           TPGK+TI KVGSNRLQVVIALSGGELIYFE+DMTGQL+EVEK +MSGDVACL IA VPEG
Sbjct: 1   TPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEG 60

Query: 596 RKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHP 655
           R+RSRFLAVGSYDNTIRILSLDPDDC+Q LSVQSVSS PESLLFLEVQASVGGEDGAD+P
Sbjct: 61  RQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYP 120

Query: 656 ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPW 715
           A+LFLNAGLQNGVLFRT VDMVTGQLSD+RSRFLGLRPPKLF  +V  R AMLCLSSRPW
Sbjct: 121 ANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAMLCLSSRPW 180

Query: 716 LGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
           LGYIH+G FLLTPLS +TLE AASFSSDQC EGVV+VAG+ALR+FTIERLGETFNET++P
Sbjct: 181 LGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIERLGETFNETSIP 240

Query: 776 LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGD 835
           LRYTPR+FV+ PKKK + +IE+D+GA +AE+REAAKKEC EAAG  ENGNGN DQMENGD
Sbjct: 241 LRYTPRKFVILPKKKYLAVIESDKGAFSAEQREAAKKECLEAAGSAENGNGNGDQMENGD 300

Query: 836 ---DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
              D  + + L DEQYGYPKAES+KWVSCIR+LDPRS +TTCLLELQDNEAA SICTVNF
Sbjct: 301 GQEDGEESNTLPDEQYGYPKAESEKWVSCIRILDPRSRDTTCLLELQDNEAAVSICTVNF 360

Query: 893 HDKEHGTLLAVGTAKGLQF 911
           HDKEHGTLLAVGT KGLQF
Sbjct: 361 HDKEHGTLLAVGTTKGLQF 379


>gi|157141630|ref|XP_001647735.1| spliceosomal protein sap [Aedes aegypti]
 gi|108867854|gb|EAT32403.1| AAEL015441-PA, partial [Aedes aegypti]
          Length = 645

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/651 (49%), Positives = 436/651 (66%), Gaps = 17/651 (2%)

Query: 569  TGQLLE-VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSV 627
            TGQL E  E+ +M  DV C+ + SVP G +RS FLAVG  DNT+R++SLDP DC+   S+
Sbjct: 1    TGQLNEYTERKKMPSDVMCMALGSVPAGEQRSWFLAVGLADNTVRVISLDPSDCLSPRSM 60

Query: 628  QSVSSPPESLLFLEVQASVGGEDG-ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRS 686
            Q++ S  ESL  +E+      E+G A     ++LN GL NGVL RTV+D V+G L+D+R+
Sbjct: 61   QALPSAAESLCIVEMGTGDTNEEGVASSAGCIYLNIGLTNGVLLRTVLDPVSGDLADTRT 120

Query: 687  RFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCV 746
            R+LG RP KLF + + G  A+L +SSR WL Y  + RF LTPLSYETLEYA+ FSS+QC 
Sbjct: 121  RYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYFQNRFHLTPLSYETLEYASGFSSEQCS 180

Query: 747  EGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEE 806
            EG+V+++ N LR+  +E+LG  FN+   PL YTP+RF++  +   +VI ETD  A T E 
Sbjct: 181  EGIVAISTNTLRILALEKLGAVFNQITFPLEYTPKRFLIHNETGKLVISETDHNAYTEET 240

Query: 807  REAAKK----ECFEAAGMGEN--GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVS 860
            +   KK    E  EAAG  E    N   D   N       + L ++ +  PKA +  W S
Sbjct: 241  KNIRKKQMADEMKEAAGEDEQELANEMADAFIN-------EVLPEDVFSAPKAGTGMWAS 293

Query: 861  CIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAG 920
             IRV+DP + +T   ++L  NEA  S+  V F   +   ++A G AK LQ  PK     G
Sbjct: 294  QIRVMDPINGHTYSKVQLAQNEAVLSMALVRFAVDQKWYVVA-GVAKDLQMNPKI-ANGG 351

Query: 921  YIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN 980
            +I +Y++      LE  H+T+++  P A+  FQGR+L G+G VLR+YDLGKK+LLRKCEN
Sbjct: 352  FIDVYKYDVHTHQLEHYHRTEIDDAPGAIAGFQGRVLVGVGRVLRIYDLGKKKLLRKCEN 411

Query: 981  KLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDT 1040
            K  PN IV+I     R++V D+QES +  KY+R ENQL IFADD+ PRW+T +  +D+DT
Sbjct: 412  KHIPNQIVNIQAMGSRVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDT 471

Query: 1041 MAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTS 1100
            +A ADKFGNI  +RLP  VSD+++EDPTG K  W++G LNGA  K E I  FH+G+ + S
Sbjct: 472  VATADKFGNIAILRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGETIMS 531

Query: 1101 LQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY 1160
            LQKA+L+PGG ES+IY T+ G++GA++ F+SR+D DFF HLEMHMR E+ PLCGRDH++Y
Sbjct: 532  LQKATLIPGGSESLIYATMSGTVGALVPFTSREDYDFFQHLEMHMRNENTPLCGRDHLSY 591

Query: 1161 RSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            RS Y+PVK V+DGDLCEQF ++    Q+ IA +L RTP E+ KKLE+IR +
Sbjct: 592  RSYYYPVKHVMDGDLCEQFTSMDPAKQKSIASDLGRTPNEVAKKLEDIRTR 642


>gi|17861814|gb|AAL39384.1| GM01240p [Drosophila melanogaster]
 gi|220943184|gb|ACL84135.1| CG13900-PB [synthetic construct]
          Length = 688

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/657 (49%), Positives = 439/657 (66%), Gaps = 17/657 (2%)

Query: 569  TGQLLE-VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSV 627
            TG+L E  E+ EM  ++ C+ + +VPEG +RS FLAVG  DNT+RILSLDP++C+   S+
Sbjct: 32   TGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSM 91

Query: 628  QSVSSPPESLLFLEV----QASVGGEDGADHPA--------SLFLNAGLQNGVLFRTVVD 675
            Q++ SP ESL  +E+      + GG D  D PA        +++LN GL NGVL RTV+D
Sbjct: 92   QALPSPAESLCLVEMGHTESTTQGGLDD-DAPAQRSGNNKGTIYLNIGLSNGVLLRTVLD 150

Query: 676  MVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLE 735
             V+G L+D+R+R+LG RP KLF + + G  A+L +SSR WL Y H+ RF LTPLSYETLE
Sbjct: 151  PVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLE 210

Query: 736  YAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVII 795
            YA+ FSS+QC EG+V+++ N LR+  +E+LG  FN+ A PL+YTPR FV+ P    M+I 
Sbjct: 211  YASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIA 270

Query: 796  ETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAES 855
            ETD  A T E+ ++A+KE          G+   +      +    + L ++ +  PKA  
Sbjct: 271  ETDHNAYT-EDTKSARKEQMAEEMRSAAGDEERELAREMANAFINEVLPEDVFSSPKAGL 329

Query: 856  DKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTL-LAVGTAKGLQFWPK 914
              W S IR LD     T   + L  NEA  S+  + F     G   LAVG AK LQ  P 
Sbjct: 330  GLWASQIRCLDAMHGQTMFSVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNP- 388

Query: 915  RNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL 974
            R    G I IY+      SLE +H+T ++ IP ALC FQGRLLAG G +LR+YD GKK++
Sbjct: 389  RISQGGCIDIYKIDPTCSSLEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKM 448

Query: 975  LRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAH 1034
            LRKCENK  P  IV+I     R+YV D+QES  F +YRR ENQL IFADD+ PRW+TA  
Sbjct: 449  LRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATT 508

Query: 1035 HIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHV 1094
             +D+DT+A ADKFGN+   RLP  V+D+++EDPTG K  W++G L+GA  K E I  FHV
Sbjct: 509  LLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHV 568

Query: 1095 GDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCG 1154
            G+++ SLQKA+L+PGG E++IY T+ G++GA + F+SR+D DFF HLEMHMR E+PPLCG
Sbjct: 569  GEIIMSLQKATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCG 628

Query: 1155 RDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            RDH++YRS+Y+PVK+V+DGDLCEQ+ ++    Q+ IA ++ RTP +I KKLE+IR +
Sbjct: 629  RDHLSYRSSYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDIRTR 685


>gi|190345965|gb|EDK37945.2| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1206

 Score =  640 bits (1652), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 430/1266 (33%), Positives = 682/1266 (53%), Gaps = 123/1266 (9%)

Query: 1    MYLYSLTLQQPTGIIAAINGNF-SGTKTPEIVVARGKVLELLR-PENSGRIETLVSTEIF 58
            ++LY LTL +PT  I +I G F    K+ E+V+A    +EL +    SG+I+ +   ++ 
Sbjct: 8    LHLYHLTLTKPTAAIKSILGQFLDNKKSQELVLATSTSIELWQFHSESGKIKQICHQQVI 67

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G I+++ + R  GS  D +V+ SDSGR+ ILE++  +  F  + QE   K+G  R  PG+
Sbjct: 68   GVIQNIDRIRKGGSNLDLLVITSDSGRLSILEFDKDELKFFPVVQEPHSKNGMNRTTPGE 127

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YL VDP+ R + IGA E+ KL+Y    +   +L +SSPLE+   +T+   +  +D G++N
Sbjct: 128  YLCVDPQDRTITIGAIERDKLMYKAQTNN-NKLELSSPLESVSKNTLTIQMVSLDTGYEN 186

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVS-RKWSEPVDNGANMLVTV 237
            P+ AAIE +Y+  D  S       +   L +YE + GLN+V+ RK +  + + +  LV +
Sbjct: 187  PMLAAIECNYAHYDA-SLKYDPQSSNLTLQYYEFEQGLNYVARRKDTLEIPSSSTTLVPL 245

Query: 238  PGGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADLPAERGVLIVSAATHR-QKTLF 295
            P       GV+V   +F+ Y N      +   IP RA       V IV  A H+ +K  F
Sbjct: 246  PT---PIGGVIVAGSSFIFYHNPTIDQQLYLPIPSRA---GSSPVPIVCYAVHKLKKNNF 299

Query: 296  FFLLQTEYGDIFKVTLEHDN--EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
            F LL  E GD F+V +++D+  E V+EL + YFDTI  + S+ V K GYLFA     +  
Sbjct: 300  FILLHNELGDCFRVLIDYDDDSEKVTELSVGYFDTISPSTSINVFKKGYLFANVTNNDKM 359

Query: 354  LYQFQAIGADPDVEASSSTLMETEEGF---QPVFFQPRGLKNLVRIEQVESLMPIMDMRI 410
            LYQ + +G D D   SSS     E+ F   +   F+PRGL+NL  ++ ++S  P     +
Sbjct: 360  LYQIEDLG-DNDSYISSSQFSSLEDVFDGNKKHEFKPRGLRNLALVQIIDSSNPCFGGAL 418

Query: 411  ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA 470
                E +  +I  + G    S L++   G+ +S +  S LP + ++V+T + +   + D 
Sbjct: 419  VKTSESKESRIAMITG---HSHLKLKTHGIPISTLVSSPLPMIATSVFTTRLSAESKNDE 475

Query: 471  YIVV--SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE- 527
            Y+V+  S ++ TLVL+IGE VEEV DS F+   P++ V  +G  SL+Q++ +GIRHIR+ 
Sbjct: 476  YMVISSSASSKTLVLAIGEVVEEVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIRQT 535

Query: 528  --DGRIN----EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT-GQLLEV-EKHE 579
              +G+I     +W  P   TI+   +N+ QV+I LS  EL YFE+D T  QL+E  E+ E
Sbjct: 536  ETEGKITKKTFDWYPPAGITIISASTNQEQVLIGLSNRELCYFEIDPTDDQLIEYQERIE 595

Query: 580  MSGDVAC-LDIAS--VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPES 636
            MSG   C L +AS  V + +++S F  V   D T++++SL   +C++ L+ Q++S+   S
Sbjct: 596  MSGGQICALALASSFVNKSQRKSPFALVACTDETVQVISLQQHNCLETLTFQALSANCTS 655

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
             + +             +  SL  + GL+NG+  R+ ++ +TG+ SD+R ++LG    KL
Sbjct: 656  AVIIS------------NETSLVAHLGLENGLYVRSTLESITGKFSDTRVKYLGADSVKL 703

Query: 697  FSVVV--GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             ++ +    +  +L +S+ PWL Y  + +  +TPL    ++   SF S++  EG+V  + 
Sbjct: 704  SAISLRQSQQVGVLAVSTYPWLCYRSKNKTRITPLMGANIKCGTSFYSEEIGEGIVGASA 763

Query: 755  NALRVFTI---ERLGETFNETALP-----LRYTPRRFVLQPKKKLMVIIETDQGALTAEE 806
            + L +FTI   E   E   E  L      LRY+P + +L+ +     +IE++ G ++  +
Sbjct: 764  SELTIFTIGEDEDNSEMSIEDELAIEDIRLRYSPTKMILEDQTAF--VIESEYGVVSPYQ 821

Query: 807  R-EAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVL 865
              E    + + A                              +GY + + + W SC+++L
Sbjct: 822  SGEEVDSDYYSA------------------------------FGYSRKD-ESWASCVQIL 850

Query: 866  DPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFW----PKRNIVAGY 921
            D  S   T   EL+DN+   S+C +NF ++++   L VGTAK L F     PK  I+   
Sbjct: 851  DLESKKITFSTELEDNQKPLSLCRMNFGNQKY---LMVGTAKDLTFQLNNNPKYKIIT-- 905

Query: 922  IHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
                 F+  G  LELLH T+V+  P A+  F+G+LL G+G  LRLY+LGKK+LLRK    
Sbjct: 906  -----FLINGSELELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGKKQLLRKSSTL 960

Query: 982  L-FPNTIVSINTY-RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD 1039
            + +   IV I    + RI VGD   S  F KY   +N    FADD + R +TA   +D D
Sbjct: 961  VDYLTKIVQITHQGKQRIVVGDGSNSTTFLKYDSSDNIFVSFADDVMKRHITALECLDHD 1020

Query: 1040 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVT 1099
            T+ G DKFGN++  R+P  +S + +++     +K++   LN A N+ + + +F + D+ T
Sbjct: 1021 TVIGGDKFGNVFVNRIPFTLSKQADQE--WSLVKYQDHYLNSAGNRSKGLCEFFLQDIPT 1078

Query: 1100 SLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPP-------- 1151
            S  K +LV GG ES+ Y  + GSLG      S+ +V FF+ LE  +R+   P        
Sbjct: 1079 SFFKGTLVTGGKESIFYTGLCGSLGFFEPLISKSEVSFFTALENSIRKVLDPNLEEHDKK 1138

Query: 1152 -----LCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLE 1206
                 L G+D + +R  Y PVK+VIDGD  E +  L    + KIA ELDRTP +I +K+ 
Sbjct: 1139 RLYCQLLGKDQLKFRGYYNPVKNVIDGDFVEYYFELDPRTKTKIATELDRTPRDIERKIA 1198

Query: 1207 EIRNKI 1212
            +IR+++
Sbjct: 1199 DIRSRV 1204


>gi|146420838|ref|XP_001486372.1| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1206

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 429/1266 (33%), Positives = 680/1266 (53%), Gaps = 123/1266 (9%)

Query: 1    MYLYSLTLQQPTGIIAAINGNF-SGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIF 58
            ++LY LTL +PT  I +I G F    K+ E+V+A    +EL +    SG+I+ +   ++ 
Sbjct: 8    LHLYHLTLTKPTAAIKSILGQFLDNKKSQELVLATSTSIELWQFHLESGKIKQICHQQVI 67

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G I+++ + R  GS  D +V+ SDSGR+ ILE++  +  F  + QE   K+G  R  PG+
Sbjct: 68   GVIQNIDRIRKGGSNLDLLVITSDSGRLSILEFDKDELKFFPVVQEPHSKNGMNRTTPGE 127

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            YL VDP+ R + IGA E+ KL+Y    +   +L + SPLE+   +T+   +  +D G++N
Sbjct: 128  YLCVDPQDRTITIGAIERDKLMYKAQTNN-NKLELLSPLESVSKNTLTIQMVSLDTGYEN 186

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVS-RKWSEPVDNGANMLVTV 237
            P+ AAIE +Y+  D  S       +   L +YE + GLN+V+ RK +  + + +  LV +
Sbjct: 187  PMLAAIECNYAHYDA-SLKYDPQSSNLTLQYYEFEQGLNYVARRKDTLEIPSSSTTLVPL 245

Query: 238  PGGGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRRADLPAERGVLIVSAATHR-QKTLF 295
            P       GV+V   +F+ Y N      +   IP RA       V IV  A H+ +K  F
Sbjct: 246  PT---PIGGVIVAGSSFIFYHNPTIDQQLYLPIPLRA---GSSPVPIVCYAVHKLKKNNF 299

Query: 296  FFLLQTEYGDIFKVTLEHDN--EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
            F LL  E GD F+V +++D+  E V+EL + YFDTI  + S+ V K GYLFA     +  
Sbjct: 300  FILLHNELGDCFRVLIDYDDDSEKVTELSVGYFDTISPSTSINVFKKGYLFANVTNNDKM 359

Query: 354  LYQFQAIGADPDVEASSSTLMETEEGF---QPVFFQPRGLKNLVRIEQVESLMPIMDMRI 410
            LYQ + +G D D   SSS     E+ F   +   F+PRGL+NL  ++ ++S  P     +
Sbjct: 360  LYQIEDLG-DNDSYISSSQFSSLEDVFDGNKKHEFKPRGLRNLALVQIIDSSNPCFGGAL 418

Query: 411  ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA 470
                E +  +I  + G    S L++   G+ +S +  S LP + ++V+T + +   + D 
Sbjct: 419  VKTSESKESRIAMITG---HSHLKLKTHGIPISTLVSSPLPMIATSVFTTRLSAESKNDE 475

Query: 471  YIVV--SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE- 527
            Y+V+  S ++ TLVL+IGE VEEV DS F+   P++ V  +G  SL+Q++ +GIRHIR+ 
Sbjct: 476  YMVISSSASSKTLVLAIGEVVEEVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIRQT 535

Query: 528  --DGRIN----EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT-GQLLEV-EKHE 579
              +G+I     +W  P   TI+   +N+ QV+I LS  EL YFE+D T  QL+E  E+ E
Sbjct: 536  ETEGKITKKTFDWYPPAGITIISASTNQEQVLIGLSNRELCYFEIDPTDDQLIEYQERIE 595

Query: 580  MSGDVAC-LDIAS--VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPES 636
            MSG   C L +AS  V + +++S F  V   D T++++SL   +C++ L+ Q++S+   S
Sbjct: 596  MSGGQICALALASSFVNKSQRKSPFALVACTDETVQVISLQQHNCLETLTFQALSANCTS 655

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
             + +             +  SL  + GL+NG+  R+ ++ +TG+ SD+R ++LG    KL
Sbjct: 656  AVIIS------------NETSLVAHLGLENGLYVRSTLESITGKFSDTRVKYLGADSVKL 703

Query: 697  FSVVVG--GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             ++ +    +  +L +S+ PWL Y  + +  +TPL    ++   SF S++  EG+V  + 
Sbjct: 704  SAISLRQLQQVGVLAVSTYPWLCYRSKNKTRITPLMGANIKCGTSFYSEEIGEGIVGASA 763

Query: 755  NALRVFTI---ERLGETFNETALP-----LRYTPRRFVLQPKKKLMVIIETDQG-ALTAE 805
            + L +FTI   E   E   E  L      LRY+P + +L+ +     +IE++ G  L  +
Sbjct: 764  SELTIFTIGEDEDNSEMSIEDELAIEDIRLRYSPTKMILEDQTAF--VIESEYGVVLPYQ 821

Query: 806  EREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVL 865
              E    + + A                              +GY + + + W SC+++L
Sbjct: 822  SGEEVDSDYYSA------------------------------FGYLRKD-ESWASCVQIL 850

Query: 866  DPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFW----PKRNIVAGY 921
            D  S   T   EL+DN+   S+C +NF ++++   L VGTAK L F     PK  I+   
Sbjct: 851  DLESKKITFSTELEDNQKPLSLCRMNFGNQKY---LMVGTAKDLTFQLNNNPKYKIIT-- 905

Query: 922  IHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
                 F+  G  LELLH T+V+  P A+  F+G+LL G+G  LRLY+LGKK+LLRK    
Sbjct: 906  -----FLINGSELELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGKKQLLRKSSTL 960

Query: 982  L-FPNTIVSINTY-RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD 1039
            + +   IV I    + RI VGD   S  F KY   +N    FADD + R +TA   +D D
Sbjct: 961  VDYLTKIVQITHQGKQRIVVGDGSNSTTFLKYDSLDNIFVSFADDVMKRHITALECLDHD 1020

Query: 1040 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVT 1099
            T+ G DKFGN++  R+P  +S + +++     +K++   LN A N+++ + +F + D+ T
Sbjct: 1021 TVIGGDKFGNVFVNRIPFTLSKQADQE--WSLVKYQDHYLNSAGNRLKGLCEFFLQDIPT 1078

Query: 1100 SLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPP-------- 1151
               K +LV GG ES+ Y  + GSLG      S+ +V FF+ LE  +R+   P        
Sbjct: 1079 LFFKGTLVTGGKESIFYTGLCGSLGFFEPLISKLEVSFFTALENSIRKVLDPNLEEHDKK 1138

Query: 1152 -----LCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLE 1206
                 L G+D + +R  Y PVK+VIDGD  E +  L    + KIA ELDRTP +I +K+ 
Sbjct: 1139 RLYCQLLGKDQLKFRGYYNPVKNVIDGDFVEYYFELDPRTKTKIATELDRTPRDIERKIA 1198

Query: 1207 EIRNKI 1212
            +IR+++
Sbjct: 1199 DIRSRV 1204


>gi|442629265|ref|NP_001261223.1| CG13900, isoform C [Drosophila melanogaster]
 gi|440215087|gb|AGB93918.1| CG13900, isoform C [Drosophila melanogaster]
          Length = 469

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 302/470 (64%), Positives = 376/470 (80%), Gaps = 8/470 (1%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           MYLY+LTLQ+ TG+  A++GNFSG K  E++++RGK LELLRP+ N+G++ TL+STEIFG
Sbjct: 1   MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +R+L  FRLTG  KDYIVVGSDSGRIVILEYNPSKN  +K+HQETFGKSGCRRIVPGQY
Sbjct: 61  CVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQY 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            A+DPKGRAVMIGA EKQKL Y++NRDT ARLTISSPLEAHKS+T+ Y + G+D GFDNP
Sbjct: 121 FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FA +E+DY EAD D +G AA   Q+ LTFYELDLGLNHV RK+SEP++  AN LV+VPG
Sbjct: 181 MFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 240 GGDGPSGVLVCAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLF 295
           G DGPSGVL+C+EN++ YKN G   D+R  IPRR    D P ERG++ + +ATHR K+++
Sbjct: 241 GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDP-ERGMIFICSATHRTKSMY 299

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           FFLLQTE GDIFK+TLE D++ VSE+K+KYFDT+P   +MCVLK+G+LF ASEFGNH LY
Sbjct: 300 FFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLY 359

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
           Q   +G D D E   S+ M  EEG +  FF PR LKNLV ++++ S  PI+  ++A+L  
Sbjct: 360 QIAHLGDDDD-EPEFSSAMPLEEG-ETFFFAPRALKNLVLVDELPSFAPIITSQVADLAN 417

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
           E+ PQ++ LCGRGPRS+LR+LR GL VSEMAVS+LPG P+AVWTVKK  +
Sbjct: 418 EDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRAD 467


>gi|67472417|ref|XP_652013.1| splicing factor 3B subunit 3 [Entamoeba histolytica HM-1:IMSS]
 gi|56468814|gb|EAL46625.1| splicing factor 3B subunit 3, putative [Entamoeba histolytica
            HM-1:IMSS]
 gi|449709507|gb|EMD48761.1| premRNA-splicing factor rse-1, putative [Entamoeba histolytica KU27]
          Length = 1145

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 382/1226 (31%), Positives = 640/1226 (52%), Gaps = 101/1226 (8%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLRPENSGRIETLVSTEIFG 59
            M   +L+L+    I  ++ G+FSG    E+++ R +  +EL R   + ++  ++   +F 
Sbjct: 1    MNFINLSLENTGKITHSLFGDFSGNGAIELLIVRSQTTIELYRINENDQVLLILQESVFC 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+ + R+    KDYI++GSDSG I +L Y+  +N    I+ E FGKSG RR+VPG+Y
Sbjct: 61   MIRSMCKIRVGSEAKDYILIGSDSGSITLLGYSSEQNKLIPIYNEIFGKSGIRRVVPGEY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            +  DP GRA MIGA EKQKLVY+ NRD+  ++TISSPLEAHKS+TI Y+I  ++ G+DNP
Sbjct: 121  ICSDPMGRAAMIGAIEKQKLVYIFNRDSNGKITISSPLEAHKSNTICYNIIALNVGYDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA IE+DY+E  Q  +       +K + FYELDLGLNHV RK +EP+D  +N L+ +  
Sbjct: 181  MFATIEVDYNE--QYLSHIEHRIIKKYVVFYELDLGLNHVIRKVAEPIDPTSNYLIPILS 238

Query: 240  GGDGPS-GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
              +G   G+ +C+E+ + + N GH  +   IP+  +       LI S      K   F L
Sbjct: 239  LNEGYHYGIFICSEDKITWFNIGHDKISIPIPKYHNQSNTHSTLITSHVMRTHKGKHFVL 298

Query: 299  LQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            LQ+E+GD+F+++ +   +  +  + +KYFD+IP   S+   K G+     E+G+  LY  
Sbjct: 299  LQSEFGDLFQLSFDTKEKGQLDNIHLKYFDSIPTALSLQFSKRGHFLCVGEYGDSILY-- 356

Query: 358  QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA-NLFEE 416
                   ++ +  +  +  E+  +  F + + + NL  I + +SL P++D+++A     +
Sbjct: 357  -------NIISMENISIPFEKDGRLEFERHKEILNLEEIYRFKSLAPLIDLKVAPATSSQ 409

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
            +  +++  CG+G +S+++IL+  L   +    +LP +P ++W +KK   DE+  Y+ +S+
Sbjct: 410  DTTKMYAFCGKGNQSTIKILKNQLNTLDAVEIELPAIPISIWPLKKET-DEYHQYLAISY 468

Query: 477  NNATLVLSIGE-TVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI--------RHIRE 527
            +N T +L I E  + E + S  L +TPSL VS++ D + +QV    I        + I E
Sbjct: 469  SNITTLLKITEDEMSECTTSPILLSTPSLLVSMLFDGTFLQVMTDRIIIYSEPIQQFITE 528

Query: 528  DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACL 587
            D +       G   IV V  N        +   LIYF+   +G LL +E+ +    +  L
Sbjct: 529  DQKYVCASCNGCELIVSVEKN--------NQTSLIYFQYQ-SGHLLTMERKDNLSKITAL 579

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL---SVQSVSSPPESLLFLEVQA 644
             +    +    S+  A+G  D ++ +LSL P++  + L   S+Q+      SL F     
Sbjct: 580  AL----DQFHPSKHCAIGCIDGSVHLLSLIPNETTKALSRVSLQTYECSINSLTF----- 630

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
                 +  D+ + LF  AGL NG+L R+V D ++G++++S   F+G RP  L +V   G 
Sbjct: 631  -----NIIDNTSYLF--AGLSNGLLGRSVYDPISGEINESSLNFVGSRPVTLSNVKDCGE 683

Query: 705  AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
             ++L +S R  L Y +  +   TPL+ +    A           +  +    +++ TIE 
Sbjct: 684  DSVLAISGRSLLSYKNGTKIKTTPLNIQNTTLACGILVPFVDNAIAIICEKVMKIITIES 743

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
               +     + + YTPR+ +  P   L+ I+E D  +            C     + +  
Sbjct: 744  TSSSLTGKNIQISYTPRKVITHPTIPLLYILEGDNNS------------CKVGNEIIQTN 791

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
             GN                              WV  I  LD         ++  +N+  
Sbjct: 792  EGN------------------------------WVGGIHTLDASQDELIQFIDFDNNKHP 821

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
               C V    K   T L +G  +  +  P +   +  I +Y   E  +S+   + T+VE 
Sbjct: 822  TGGCVVRSISKNQ-TYLIIGVIESYKTRPIQ-WKSSEIQVYSINE--RSINYCYSTKVEY 877

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
               A  +F+G +LAG+G +LRLYD+G K LLRK E + F + I  ++   + I +  + +
Sbjct: 878  PVRAFAEFKGMVLAGVGNILRLYDIGLKSLLRKAEKRQFASDIAQLHVIGETILLTGVSD 937

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
             F+  +Y +  ++  I+A DS+PRW+  A  ++  T+  +DKFG I+  +LP+++ +E  
Sbjct: 938  GFNLIRYNQINHKFDIYA-DSLPRWVVTAAPLNQSTVLASDKFGEIFMYQLPKEI-EEQA 995

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
             +P    ++  +    G+  KM    QF VGD+ TS  + SL+PG     +Y   MG L 
Sbjct: 996  LNPFSTLLQPHKTIYEGSSYKMVTATQFFVGDIATSFAQCSLIPGAPSIFLYSNFMGGLS 1055

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
            A++   S++D+DF+ HLEMHMR     L  R+H+++RS+  PVKD +DGDLCE +  L  
Sbjct: 1056 ALIPLQSQNDIDFYQHLEMHMRVHWTNLTDRNHISFRSSIVPVKDTVDGDLCELYERLPY 1115

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRN 1210
            ++Q++IA+E+++   EI+KKL ++R+
Sbjct: 1116 EIQQEIAEEMEKEVNEIIKKLHDLRH 1141


>gi|407044064|gb|EKE42344.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
          Length = 1145

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 381/1226 (31%), Positives = 640/1226 (52%), Gaps = 101/1226 (8%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLRPENSGRIETLVSTEIFG 59
            M   +L+L+    I  ++ G+FSG    E+++ R +  +EL R   + ++  ++   +F 
Sbjct: 1    MNFINLSLENTGKITHSLFGDFSGNGVIELLIVRSQTTIELYRINENDQVSLILQESVFC 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+ + R+    KDYI++GSDSG I +L Y+  +N    I+ E FGKSG RR+VPG+Y
Sbjct: 61   MIRSMCKIRIGSEAKDYILIGSDSGSITLLGYSSEQNKLIPIYNEIFGKSGIRRVVPGEY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            +  DP GRA MIGA EKQKLVY+ NRD+  ++TISSPLEAHKS+TI Y+I  ++ G+DNP
Sbjct: 121  ICSDPMGRAAMIGAIEKQKLVYIFNRDSNGKITISSPLEAHKSNTICYNIIALNVGYDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            +FA IE+DY+E  Q  +       +K + FYELDLGLNHV RK +EP+D  +N L+ +  
Sbjct: 181  MFATIEVDYNE--QYLSHIEHRIIKKYVVFYELDLGLNHVIRKVAEPIDPTSNYLIPILS 238

Query: 240  GGDGPS-GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
              +G   G+ +C+E+ + + N GH  +   IP+  +       LI S      K   F L
Sbjct: 239  LNEGYHYGLFICSEDKITWFNIGHDKICIPIPKYHNQSNTHSTLITSHVMRTHKGKHFVL 298

Query: 299  LQTEYGDIFKVTLE-HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            LQ+E+GD+F+++ +  +   +  + ++YFD+IP   S+   K G+     E+G+  LY  
Sbjct: 299  LQSEFGDLFQLSFDIKEKGQLDNIHLRYFDSIPTALSLQFSKRGHFLCVGEYGDSILY-- 356

Query: 358  QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA-NLFEE 416
                   ++ +  +  +  E+  +  F + + + NL  I + +SL P++D+++A     +
Sbjct: 357  -------NIISMENITIPFEKDGRLEFERHKEILNLEEIYRFKSLAPLIDLKVAPATSSQ 409

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
            +  +++  CG+G +S+++IL+  L   +    +LP +P ++W +KK   DE+  Y+ +S+
Sbjct: 410  DTTKMYAFCGKGNQSTIKILKNQLNTLDAVEIELPAIPISIWPLKKET-DEYHQYLAISY 468

Query: 477  NNATLVLSIGE-TVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI--------RHIRE 527
            +N T +L I E  + E + S  L +TPSL VS++ D + +QV    I        + I E
Sbjct: 469  SNITTLLKITEDEMSECTTSPILLSTPSLLVSMLFDGTFLQVMTDRIIIYSEPIQQFITE 528

Query: 528  DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACL 587
            D +       G   IV V  N        +   LIYF+   +G LL +E+ +    +  L
Sbjct: 529  DQKYVCASCNGSELIVSVEKN--------NQTSLIYFQYQ-SGHLLTMERKDNLSKITAL 579

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL---SVQSVSSPPESLLFLEVQA 644
             +    +    S+  A+G  D ++ +LSL P++  + L   S+Q+      SL F     
Sbjct: 580  AL----DQFHPSKHCAIGCIDGSVHLLSLIPNETTKALSRVSLQTYECSINSLTF----- 630

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
                 +  D+ + LF  AGL NG+L R+V D ++G++++S   F+G RP  L +V   G 
Sbjct: 631  -----NIIDNTSYLF--AGLSNGLLGRSVYDPISGEINESSLNFVGSRPVTLSNVKDCGE 683

Query: 705  AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
             ++L +S R  L Y +  +   TPL+ +    A           +  +    +++ TIE 
Sbjct: 684  DSVLAISGRSLLSYKNGTKIKTTPLNIQNTTLACGILVPFVDNAIAIICEKVMKIITIES 743

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
               +     + + YTPR+ +  P   L+ I+E D  +            C     + +  
Sbjct: 744  TSSSLTGKNIQISYTPRKVITHPTIPLLYILEGDNNS------------CKVGNEIIQTN 791

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
             GN                              WV  I  LD         ++  +N+  
Sbjct: 792  EGN------------------------------WVGGIHTLDASQDELIQFIDFDNNKHP 821

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
               C V    K   T L VG  +  +  P +   +  I +Y   E  +S+   + T+VE 
Sbjct: 822  TGGCVVRSISKNQ-TYLIVGVIESYKTRPIQ-WKSSEIQVYSINE--RSINYCYSTKVEY 877

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
               A  +F+G +LAG+G +LRLYD+G K LL+K E + F + I  ++   + I +  + +
Sbjct: 878  PVRAFAEFKGMVLAGVGNILRLYDIGLKSLLKKAEKRQFASDIAQLHVIGETILLTGVSD 937

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
             F+  +Y +  ++  I+A DS+PRW+  A  ++  T+  +DKFG I+  +LP+++ +E  
Sbjct: 938  GFNLIRYNQINHKFDIYA-DSLPRWVVTAAPLNQSTVLASDKFGEIFMYQLPKEI-EEQA 995

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLG 1124
             +P    ++  +    G+  KM    QF VGD+ TS  + SL+PG     +Y   MG L 
Sbjct: 996  LNPFSTLLQPHKTIYEGSSYKMVTATQFFVGDIATSFAQCSLIPGAPSIFLYSNFMGGLS 1055

Query: 1125 AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSL 1184
            A++   S++D+DF+ HLEMHMR     L  R+H+++RS+  PVKD +DGDLCE +  L  
Sbjct: 1056 ALIPLQSQNDIDFYQHLEMHMRVHWTNLTDRNHISFRSSIVPVKDTVDGDLCELYERLPY 1115

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRN 1210
            ++Q++IA+E+++   EI+KKL ++R+
Sbjct: 1116 EIQQEIAEEMEKEVNEIIKKLHDLRH 1141


>gi|241952575|ref|XP_002419009.1| pre-mRNA-splicing factor, putative; pre-spliceosome component,
            putative [Candida dubliniensis CD36]
 gi|223642349|emb|CAX42591.1| pre-mRNA-splicing factor, putative [Candida dubliniensis CD36]
          Length = 1187

 Score =  624 bits (1609), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 410/1251 (32%), Positives = 664/1251 (53%), Gaps = 114/1251 (9%)

Query: 1    MYLYSLTLQQPTGIIAAINGNF-----SGTKTPEIVVARGKVLELLR-PENSGRIETLVS 54
            +YLY+LTL+ P+  I++I G+F     S     ++V+A    L+L    E +G++E   S
Sbjct: 8    IYLYNLTLKPPSHYISSIVGHFYKQGNSTKNAQQLVLASYTTLQLFEVNEETGKLELQSS 67

Query: 55   TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY-NPSKNVFDKIHQETFGKSGCRR 113
              + G I S+   ++  S+ D +V+ SDSG + ILEY N SK    KI QE   K+G  R
Sbjct: 68   QNLLGTINSIE--KICISEVDGVVITSDSGNLSILEYDNTSKKFISKI-QEPMTKNGWGR 124

Query: 114  IVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGID 173
               G+ LA+DP+ R +++ A EK KL+Y +   ++    +SSPLEAH        I  ++
Sbjct: 125  NYVGENLAIDPENRCILVAAMEKNKLLYKIESTSSGSKELSSPLEAHSKQVSCLKIVALN 184

Query: 174  CGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-----SEPVD 228
               +NP+F A+EL               E    + +YELD GLNHV +K      S+P+ 
Sbjct: 185  TDHNNPLFGALEL-------------TPEKNFIINYYELDQGLNHVVKKKPASLNSDPLP 231

Query: 229  NGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAT 288
            +  N ++ +PG      G+LVC  N+  Y     P +   +PRR     E   +IV+  T
Sbjct: 232  DDVNYMIPLPGH---IGGMLVCGSNWCFYDKLDGPRIYLPLPRRDGQTQES--IIVNHVT 286

Query: 289  H-RQKTLFFFLLQTEYGDIFKVTLEHD--NEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
            H  +K  FF LLQ   GD+FK+T+++D   E +  + I YFDTIP   S+ + K+G+LF 
Sbjct: 287  HVLKKKNFFILLQNTLGDLFKLTVDYDFDKETIKNISITYFDTIPPALSLNIFKNGFLFV 346

Query: 346  ASEFGNHALYQFQAIGADPD-----VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVE 400
                 +  LYQF+ +G D       + +S    ++   G     F+ +GL NL  I+ +E
Sbjct: 347  NVLNNDKLLYQFEKLGDDLAENELVINSSDYDSLDNVRGTDTTTFKLKGLDNLALIDVLE 406

Query: 401  SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
            +L PI+D RI +       ++ TL      S ++ +  G+  + +  S LP  P+ ++T 
Sbjct: 407  TLSPIIDSRIND------SKLVTLSSH---SYVKSITHGVPTTTLVESPLPITPTDIFTT 457

Query: 461  KKNVNDEFDAYIVVS--FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            K ++    D Y+V+S   ++ TLVLSIGE VE+V DS F+    +++V  +G  S++QV+
Sbjct: 458  KLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQSTISVQQVGIASVVQVY 517

Query: 519  PSGIRHIRE---DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG-QLLE 574
             +GI+HIR      +  +W  P   TI    +N  QV+IALS   ++YFE+D T  QL+E
Sbjct: 518  SNGIKHIRTVNGKKKTTDWFPPAGITITHASTNNQQVLIALSNLNVVYFEIDSTDDQLIE 577

Query: 575  VEKH-EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP 633
             + H E+S  +  + I       ++S F  +G  D TI+++SL  D+C++I S+Q++S+ 
Sbjct: 578  YQDHLEISTTITAMAIQE--HNSEKSSFAIIGCSDETIQVVSLQEDNCLEIKSLQALSAN 635

Query: 634  PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
              S           G++   H        G++NGV  R  +D + G LS+SR ++LG +P
Sbjct: 636  SSS----LKMLKSSGKETHVH-------IGMENGVYARIKIDTINGNLSNSRVKYLGSKP 684

Query: 694  PKLFSVVVGGR-AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVEGVVS 751
              L  +        +L +SS PW+ Y++R  F +TPL    +   +SF S D   EG+V 
Sbjct: 685  VNLSVIKFSNEIEGVLAISSAPWISYLYRDSFKITPLLEIDITNGSSFISEDIGGEGIVG 744

Query: 752  VAGNALRVFTIERLGETFNE------TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAE 805
            +  N L +F++ +    F+       T   LRYTPR+ +            T    L   
Sbjct: 745  IKDNNLVIFSVGKEDSVFDPSQDLTITNTKLRYTPRKMI------------THGDRLFIS 792

Query: 806  EREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVL 865
            E E   +  F+      N NGN+ +     DE+ Y     E +GY + + D W SCI+V+
Sbjct: 793  ESEYNVQGPFKC-----NINGNVKE---NVDEDYY-----EAFGYDRKQ-DSWASCIQVV 838

Query: 866  DPRSANTTCLLELQDNEAAFSICTVNFH---DKEHGTLLAVGTAKGLQFWPKRNIVAGYI 922
            D ++      L+ ++NE+  S+  V F+      H + L VG        P     +   
Sbjct: 839  DDKTNQVIQSLQFEENESIVSMSDVAFNKSLSSVHASHLVVGVCTNQTILPNSYEKS--- 895

Query: 923  HIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL 982
            ++Y F    K L+L+HKT+++ IP  L  FQ +LL      ++LYD+G+K+LL+K    +
Sbjct: 896  YLYTFKIGKKHLQLVHKTELDYIPQVLENFQDKLLVASNNHIQLYDIGQKQLLKKSTTII 955

Query: 983  -FPNTIVSINTYRDRIYVGDIQES-FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDT 1040
             F   I  I    +RI + D  +S   F K+   +NQ   FADD + R +T+  ++D DT
Sbjct: 956  DFSQNINKIIPQSNRIIICDSHKSSIIFAKFDDSQNQFVPFADDIMKRQITSIMNLDIDT 1015

Query: 1041 MAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTS 1100
            + G DKFGNI+  R+ +D+S + ++D T   +K ++G LN  P K++ +++FH+GD++TS
Sbjct: 1016 LIGGDKFGNIFVTRIDEDISKQADDDWT--ILKSQEGILNSCPYKLQNLIEFHIGDIITS 1073

Query: 1101 LQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY 1160
            L    L   G ESVIY  + G++G ++   S+ +V+   +L++ M+Q    L G+DH+ +
Sbjct: 1074 LNLGCLNLAGTESVIYTGLQGTIGLLVPLVSKSEVELLFNLQLLMQQFQNNLVGKDHLKF 1133

Query: 1161 RSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            RS Y P+K+VIDGDL E+F      L+ +I+ +L+++  +I KKL ++RN+
Sbjct: 1134 RSYYNPIKNVIDGDLLERFLEFDTSLRIEISRKLNKSVNDIEKKLIDLRNR 1184


>gi|167395195|ref|XP_001741266.1| pre-mRNA-splicing factor rse-1 [Entamoeba dispar SAW760]
 gi|165894222|gb|EDR22283.1| pre-mRNA-splicing factor rse-1, putative [Entamoeba dispar SAW760]
          Length = 1145

 Score =  614 bits (1583), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 377/1221 (30%), Positives = 636/1221 (52%), Gaps = 91/1221 (7%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKV-LELLRPENSGRIETLVSTEIFG 59
            M   +L+L+    I  ++ G+FSG    E+++ R +  +EL R   + ++  L+   +F 
Sbjct: 1    MNFINLSLENTGKITHSLFGDFSGNGAIELLLVRSQTTIELYRINENDQVSLLLQESVFC 60

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             IRS+ + R+    KDYI++GSDSG I +L Y+  +N    I  E FGKSG RR+VPG+Y
Sbjct: 61   MIRSICKIRIGSEAKDYILIGSDSGSITLLGYSFEQNKLIPICNEIFGKSGIRRVVPGEY 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            +  DP GRA MIGA EKQKLVY+ NRD   ++TISSPLEAHKS+TI Y+I  ++ G+DNP
Sbjct: 121  ICSDPMGRAAMIGAIEKQKLVYIFNRDNNGKITISSPLEAHKSNTICYNIIALNVGYDNP 180

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFA IE+DY+E  Q  +       +K +  YELDLGLNHV RK +EP+D  +N L+ +  
Sbjct: 181  IFATIEVDYNE--QYLSHIEHRIIKKYVVLYELDLGLNHVIRKVAEPIDPTSNYLIPILS 238

Query: 240  -GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
               +   G+ +C+E+ + + N GH  V   IP+  +       LI S      K   F L
Sbjct: 239  LNEECHYGIFICSEDKITWFNIGHDKVCIPIPKYHNQSNTHSTLITSHVMRTHKGKHFVL 298

Query: 299  LQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            LQ+E+GD+F++  +   +  +  + I+YFD+IP+  S+   K G+L    E+G+  LY  
Sbjct: 299  LQSEFGDLFQLLFDTKEKGQLDNIHIRYFDSIPIALSLQFSKRGHLLCIGEYGDSILY-- 356

Query: 358  QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA-NLFEE 416
                   ++ +  +  +  E+  +  F +   + NL    + +SL P++D+++A     +
Sbjct: 357  -------NIISMENINVPLEKNGRLEFERHEEILNLEEFYRFKSLAPLIDLKVAPATSSQ 409

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
            +  +++  CG+G +S+++IL+  L   +    +LP +P +VW +KK   DE+  Y+ +S+
Sbjct: 410  DTTKMYAFCGKGNQSTIKILKNQLNTLDAVEIELPAIPISVWPLKKET-DEYHQYLAISY 468

Query: 477  NNATLVLSIGE-TVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
            +N T +L I E  + E + +  L +TPSL VS++ D + +QV     R I     I ++ 
Sbjct: 469  SNITTLLKITEDEMSECNTTPILLSTPSLLVSMLSDGTFLQVMTD--RIIVYSEPIQQFI 526

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGE---LIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            T  ++ +     N  ++++++       LIYF+   +G LL +E+ E    +  L +   
Sbjct: 527  TENQKYVC-ASCNGSELIVSVEKNNQTALIYFQYQ-SGHLLTMERKENLAKITALAL--- 581

Query: 593  PEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL---SVQSVSSPPESLLFLEVQASVGGE 649
             +    S+  A+G  D ++ +LSL P++  + L   S+Q+      SL F          
Sbjct: 582  -DQFHPSQHCAIGCVDGSVHLLSLIPNETTKALSRVSLQTYDCSVNSLTF---------- 630

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
            +  D+ + LF  AGL NG+L R+  D ++G++++S   F+G RP  L +V   G  ++L 
Sbjct: 631  NIIDNKSYLF--AGLSNGLLGRSTYDPISGEINESSLNFVGSRPVTLSNVKDCGEDSVLA 688

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
            +S R  L Y +  +   TPL+ +    A           +  +    +++ TIE    + 
Sbjct: 689  ISGRSLLSYKNGTKIKTTPLNIQNTTLACGILVPFVDNAIAIICEKVMKIITIESTSSSL 748

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
                + L YTPR+ +  P   L+ I+E D  +            C     + +   GN  
Sbjct: 749  TGKNIQLSYTPRKIITHPTIPLLYILEGDNNS------------CKVGNEIIQTNEGN-- 794

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
                                        WV  I +LD         ++  +N+   + C 
Sbjct: 795  ----------------------------WVGGIHILDASQDELIQFIDFDNNKHPTAGCV 826

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLAL 949
            V    K   T L VG    ++ +  R I      I  ++    S+   + T+VE    A 
Sbjct: 827  VRSISKNQ-TYLIVGV---IESYKTRPIQWKSSEIQVYIINEHSINYCYSTKVEYPVRAF 882

Query: 950  CQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFC 1009
             +F+G +LAG+G VLRLYD+G K LL+K E +   + +  ++   + I +  I + F+  
Sbjct: 883  AEFKGMVLAGVGNVLRLYDIGLKSLLKKAEKRQLASDVAQLHVIGETILLTGISDGFNLI 942

Query: 1010 KYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTG 1069
            +Y +  ++  I+A DS+PRW+  A  ++  T+  +DKFG I+  +LP+++ +E    P  
Sbjct: 943  RYNQINHKFDIYA-DSLPRWVVTAAPLNQSTVLASDKFGEIFMYQLPKEI-EEKALSPFS 1000

Query: 1070 GKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAF 1129
              ++  +    G+  KM    QF +GD+ TS  + SL+PG     +Y   MG L A++  
Sbjct: 1001 TLLQPHKTIYEGSNYKMVTATQFFIGDIATSFAQCSLIPGAPSIFLYSNFMGGLSALIPL 1060

Query: 1130 SSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRK 1189
             +++D+DF+ HLEMHMR     L  R+H+++RS+  PVKD +DGDLCE +  L  ++Q++
Sbjct: 1061 QNQNDIDFYQHLEMHMRVHWTNLTDRNHISFRSSMVPVKDTVDGDLCELYERLPYEIQQE 1120

Query: 1190 IADELDRTPGEILKKLEEIRN 1210
            IA+E+++   EI+KKL ++R+
Sbjct: 1121 IAEEMEKEVNEIIKKLHDLRH 1141


>gi|68476233|ref|XP_717766.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
 gi|68476422|ref|XP_717672.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
 gi|74586274|sp|Q5A7S5.1|RSE1_CANAL RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|46439394|gb|EAK98712.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
 gi|46439495|gb|EAK98812.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
          Length = 1219

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 407/1253 (32%), Positives = 666/1253 (53%), Gaps = 118/1253 (9%)

Query: 1    MYLYSLTLQQPTGIIAAINGNF-----SGTKTPEIVVARGKVLELLR-PENSGRIETLVS 54
            +YLY+LTL+ P+  I++I G F     S     ++V+     L+L    E +G++E   S
Sbjct: 40   VYLYNLTLKPPSYYISSIVGQFYKQDNSTKNAQQLVLVSSTTLQLFEINEEAGKLELQSS 99

Query: 55   TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY-NPSKNVFDKIHQETFGKSGCRR 113
              + G I S+ +  L  S+ D +V+ SDSG + IL+Y N +K    KI QE   K+G  R
Sbjct: 100  QNLLGIINSIEKICL--SEVDGVVITSDSGNLSILQYDNKTKKFISKI-QEPMTKNGWGR 156

Query: 114  IVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGID 173
               G+ LA+DP+ R +++ A EK KL Y +  +++    +SSPLEAH    +   I  ++
Sbjct: 157  NYVGENLAIDPENRCILVAAMEKNKLFYKIESNSSGSKELSSPLEAHSKQVLCLKIVALN 216

Query: 174  CGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-----SEPVD 228
               +NP+F A+EL               E +  + +YELD GLNHV +K      S+P+ 
Sbjct: 217  TDHNNPLFGALEL-------------TPEKKCIINYYELDQGLNHVVKKKPNSSNSDPLP 263

Query: 229  NGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAT 288
            N  N L+ +PG      G++VC  N+  Y     P +   +PRR     +   +IV+  T
Sbjct: 264  NDVNYLIPLPGH---IGGMVVCGTNWCFYDKLDGPRIYLPLPRRNGQTQDS--IIVNHVT 318

Query: 289  H-RQKTLFFFLLQTEYGDIFKVTLEHD--NEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
            H  +K  FF LLQ   GD+FK+T+++D   E +  + I YFDTIP   S+ + K+G+LFA
Sbjct: 319  HVLKKKKFFILLQNALGDLFKLTVDYDFDKEIIKNISITYFDTIPPALSLNIFKNGFLFA 378

Query: 346  ASEFGNHALYQFQAIGAD---PDVEASSS---TLMETEEGFQPVFFQPRGLKNLVRIEQV 399
                 +  LYQF+ +G D    ++  +SS   +L    E      F+ +GL NL  I+ +
Sbjct: 379  NVLNNDKLLYQFEKLGDDLTEGELVINSSDYESLNSVRESVTS--FKLKGLDNLALIDVL 436

Query: 400  ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
            E+L PI D +I +       ++ TL      S ++ +  G+  + +  S LP  P+ ++T
Sbjct: 437  ETLSPITDSKIID------SKLVTLSSH---SYVKSITHGVPTTTLVESPLPITPTDIFT 487

Query: 460  VKKNVNDEFDAYIVVS--FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQV 517
             K ++    D Y+V+S   ++ TLVLSIGE VE+V DS F+   P++AV  +G  S++Q+
Sbjct: 488  TKLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGIASVVQI 547

Query: 518  HPSGIRHIRE---DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG-QLL 573
            + +GI+H+R    + +  +W  P   TI    +N  QV+IALS   ++YFE+D T  QL+
Sbjct: 548  YSNGIKHVRTVNGNKKTTDWFPPAGITITHATTNNQQVLIALSNLSVVYFEIDATDDQLI 607

Query: 574  EVE-KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSS 632
            E + + E++  +  + I       ++S F  +G  D TI+++SL   +C++I S+Q++S+
Sbjct: 608  EYQDRLEIATTITAMAIQE--NISEKSPFAIIGCSDETIQVVSLQEHNCLEIKSLQALSA 665

Query: 633  PPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLR 692
               S           G++   H        G++NGV  R  +D + G LS+SR +++G +
Sbjct: 666  NSSS----LKMLKSSGKETHVH-------IGMENGVYARIKIDTINGNLSNSRVKYIGSK 714

Query: 693  PPKLFSVVVGGR-AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVEGVV 750
            P  L  +        +L +SS PW+ Y++R  F +TPL    +   +SF S D   EG+V
Sbjct: 715  PVSLSVIKFSNEIEGILAISSAPWISYLYRDSFKITPLLEIDITNGSSFISEDIGGEGIV 774

Query: 751  SVAGNALRVFTIERLGETFNET------ALPLRYTPRRFVLQPKKKLMVIIETDQGALTA 804
             +  N L +F++ +    F+ +         LRYTPR+ +            T+   L  
Sbjct: 775  GIKDNNLIIFSVGKEDSVFDPSQDLTIATTKLRYTPRKMI------------TNGNRLFI 822

Query: 805  EEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRV 864
             E E   +  F+        N N D  EN D E+ Y     E +GY + + + W SCI+V
Sbjct: 823  SESEYNVQGPFKC-------NINGDVKENVD-EDYY-----EAFGY-EWKQNSWASCIQV 868

Query: 865  LDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTL----LAVGTAKGLQFWPKRNIVAG 920
            +D +S      L+L  NE+  S+  V+F+     ++    L VG        P       
Sbjct: 869  VDSKSNQVIQSLQLDGNESIVSMSAVSFNKTSTPSVPASHLVVGVCTNQTILPNS---YD 925

Query: 921  YIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN 980
              ++Y F    K L+L+HKT+++ IP  L  FQ +LL   G  +RLYD+G+K+LL+K   
Sbjct: 926  KSYLYTFKIGKKHLQLVHKTELDHIPQVLENFQDKLLVASGNHIRLYDIGQKQLLKKSTT 985

Query: 981  KL-FPNTIVSINTYRDRIYVGDIQES-FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDF 1038
             + F   I  I    +RI + D  +S   F K+   +NQ   FADD + R +T+  ++D 
Sbjct: 986  IIDFSTNINKIIPQTNRIIICDSHKSSIVFAKFDESQNQFVPFADDVMKRQITSIMNLDI 1045

Query: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
            DT+ G DKFGNI+  R+ +D+S + ++D T   +K + G LN  P K++ +++FH+GD++
Sbjct: 1046 DTLIGGDKFGNIFVTRIDEDISKQADDDWT--ILKTQDGILNSCPYKLQNLIEFHIGDII 1103

Query: 1099 TSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHM 1158
            TS     L   G ESVIY  + G++G ++   S+ +V+   +L+++M+Q    L G+DH+
Sbjct: 1104 TSFNLGCLNLAGTESVIYTGLQGTIGLLIPLVSKSEVELLFNLQLYMQQSQNNLVGKDHL 1163

Query: 1159 AYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              RS Y P+K+VIDGDL E+F    + L+ +I+ +L+++  +I KKL ++RN+
Sbjct: 1164 KLRSYYNPIKNVIDGDLLERFLEFDISLKIEISRKLNKSVNDIEKKLIDLRNR 1216


>gi|406602265|emb|CCH46158.1| Pre-mRNA-splicing factor [Wickerhamomyces ciferrii]
          Length = 1123

 Score =  597 bits (1540), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 321/812 (39%), Positives = 498/812 (61%), Gaps = 42/812 (5%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           ++LY+LTLQ+ +  + +  GNFSG KT EI+ A    L + +P   +G++  L++ +IF 
Sbjct: 7   LHLYNLTLQRQSNSLKSCVGNFSGKKTQEIITATSNSLIVYKPNVETGKLVNLLNVQIFA 66

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRS+  F++ GS KDY+ + SDSG   ILE + +   F+ +  E + KSG RR+ PGQ 
Sbjct: 67  IIRSMENFKIAGSGKDYLAITSDSGNFSILELDLNNGKFNTLFNEPYHKSGIRRLSPGQD 126

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRA++  A EK KL YV NRD    LTISSPLEA++S  +  +  G+D G++NP
Sbjct: 127 LAVDPKGRAILATAIEKNKLCYVFNRDLDNNLTISSPLEANRSKILTLTSIGLDVGYENP 186

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FA IE+DYS  +     +  +E ++ LTFYELDLGLNH+ R+ +E + + +N+L+ VPG
Sbjct: 187 VFATIEIDYSNYEY---IENLTEVERFLTFYELDLGLNHIVRRKTEKIHDSSNLLLQVPG 243

Query: 240 GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
           G DGPSGVLVC++N + Y+N     V   IP+  +  + +   IV+   H+ K  FFF++
Sbjct: 244 GNDGPSGVLVCSKNLISYRNLIGDKVSINIPKLEN-SSNQDSFIVAGVVHKMKNQFFFIV 302

Query: 300 QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
           QT +GD+FK+ L  +      + I YFDTIP+ +S+ +L+SG+L+  SE+G+   YQF+ 
Sbjct: 303 QTNHGDLFKIELLEE----GSITISYFDTIPLASSIIILRSGFLYCDSEYGSKFFYQFEK 358

Query: 360 IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
           +G++    +S+   +E     +  F +   L NL+ ++ ++SL P++D ++ N  ++   
Sbjct: 359 LGSESPFISSNDEPIE-----ELTFERTEELDNLLLVDVLDSLNPLIDSKLVN--DDAFT 411

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
           +I++L G    SSL+IL+ GL+++E+  S LPG+ + VWT K N NDEFD Y+V+SF + 
Sbjct: 412 KIYSLSGVKDSSSLKILQYGLSINEIVESDLPGIANKVWTTKLNKNDEFDKYLVISFMDT 471

Query: 480 TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
           TLVLSIGE VEE++DSG      ++ +  IG +SL+Q+H +GIR+I+    INEW+ P  
Sbjct: 472 TLVLSIGENVEEITDSGLALNEETIGIQQIGINSLVQIHSNGIRNIKNGELINEWQPPAG 531

Query: 540 RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-EKHEMSGDVACLDIASVPEGRKR 598
             I+   +   Q+ I LS  EL+YFEVD   +L+E  E+ E++  +  L +  +PEGR R
Sbjct: 532 IKILTTSTTNRQIAIGLSNDELVYFEVDDRDRLIEYNERKELTSRIVSLSLGDIPEGRLR 591

Query: 599 SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
           S FL VG  D+TIR+LS DP   +++LS+Q++SS P  +L L +               L
Sbjct: 592 SPFLIVGCQDSTIRVLSTDPGSTLELLSLQALSSIPFDILTLSMN------------NQL 639

Query: 659 FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGY 718
           F+N GL+NGV  RT++D   GQLSD+R ++LG +P  L  + + G   +L  S++ W+  
Sbjct: 640 FVNIGLENGVYVRTLIDEQNGQLSDTRIKYLGNKPVSLSKISISGVNVVLAFSNKTWI-- 697

Query: 719 IHRGR---FLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
           +H  +   F +  L    L++   F+S+ C++G+V V    L +FTI+ L   FN  ++ 
Sbjct: 698 VHETKNSTFKINSLLINPLKFGFMFNSEDCIDGIVGVYKKNLIIFTIDDLDNDFNINSIQ 757

Query: 776 LRYTPRR--------FVLQPKKKLMVIIETDQ 799
           L+ TP+         F+ Q    L  I + DQ
Sbjct: 758 LKTTPKNLLKNNQDIFITQNSSSLGFIEKFDQ 789



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/277 (41%), Positives = 173/277 (62%), Gaps = 3/277 (1%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP-NTIVSINT 992
            L L+H T++  I  A+ +FQG++L GI   LRL+D+G K+LL K  +K+   + IV I T
Sbjct: 845  LNLIHITKISDIAYAITEFQGKVLIGISNHLRLFDMGLKQLLSKANSKIDTISKIVKIET 904

Query: 993  YRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
               R+ VGDI+ES  F  Y+   N+   F DD +PR +T+   +D++T+ G DKFGN++ 
Sbjct: 905  QGYRVVVGDIRESITFLVYKPKSNEFLTFTDDILPRHITSIKMLDYNTVIGGDKFGNLFI 964

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
            +R  ++ S +I +  +   I  ++  LNGAP K+  +  F + D+ TS  K S   GG +
Sbjct: 965  LRASEE-SSKISDTNSTFLITKDKF-LNGAPFKLMNLCNFFIEDIPTSFAKGSFTIGGKD 1022

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
             +IY  + G++GA++   ++ D+ FF +LE  MR   P L GR ++ YR  Y PVK+VID
Sbjct: 1023 LIIYTGLQGTVGALIPLLTKSDIKFFINLEKQMRLHKPDLLGRMNLKYRGYYQPVKNVID 1082

Query: 1173 GDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            GDL E F TLS   + +I++ELD+TP EI KK++EIR
Sbjct: 1083 GDLIELFNTLSESTKVEISNELDKTPREISKKIDEIR 1119


>gi|350645868|emb|CCD59413.1| Splicing factor 3B subunit 3, 5' fragment [Schistosoma mansoni]
          Length = 1073

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/633 (48%), Positives = 411/633 (64%), Gaps = 12/633 (1%)

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +E+DAYI+VSF NATLVLSIGETVEEV+DSGFL TTP+L  S +GDD+L+QV+P GIRHI
Sbjct: 431  EEYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHI 490

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDV 584
            R D R+N WR PGK+TI K   NR QVVIAL+GGEL+YFE+DMTGQL E  E+ EM  DV
Sbjct: 491  RSDKRVNVWRAPGKKTITKCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPADV 550

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV-- 642
             C+ +  +P   +RSRFLAVG  DNT+RILSLDP DC+  L++Q + S PESL  +E+  
Sbjct: 551  ICMALGRIPANEQRSRFLAVGLADNTVRILSLDPSDCLTPLTMQGIPSTPESLCIVEMGT 610

Query: 643  -QASVGGEDGADHPAS----LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
             + S   +DG     S    L++N GL NGVL R ++D VTG+LSD+R+R+LG RP KLF
Sbjct: 611  NEPSPSTDDGESEATSSGGILYMNIGLINGVLLRVILDPVTGELSDTRTRYLGTRPVKLF 670

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
             +++ G  A+L +SSR WL Y ++ RF L PLSYE LEYA+ FSS+QC EG+V++  N+L
Sbjct: 671  RIMMQGGEAVLSVSSRSWLSYAYQNRFHLIPLSYEALEYASGFSSEQCPEGIVAICNNSL 730

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
            R+  +E+LG  FN+ + PL+YTPR+FV  P   +  IIETD  + T + +   K++  E 
Sbjct: 731  RIMALEKLGAVFNQISYPLQYTPRKFVFHPDSNITYIIETDHNSYTDDVKNTHKRQMAEK 790

Query: 818  AGMGENGNGNMDQMENGDDENKY--DPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL 875
                  G    D     +    +  + L +  +G PKA    W S +R   P   +T  +
Sbjct: 791  MIASALGGTPEDMALAKESAAAFLSENLPEAIFGAPKAGPGMWASLLRCFKPLDGSTCQI 850

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            +    NEAA ++  V F++      L V   K L   P R+   G +  YR    G+ LE
Sbjct: 851  IRFPQNEAAHALTFVKFNNHPAEQFLVVALVKDLILNP-RSCSGGCLKTYRIWNNGERLE 909

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
             LH+T V+  P ALC FQGRLL G+G  LR+YDLGKK+LL+KCENK  P  I  I +   
Sbjct: 910  FLHETPVDDFPAALCAFQGRLLVGVGNRLRIYDLGKKKLLKKCENKHIPTLINGIYSVGS 969

Query: 996  RIYVGDIQESFHFCKYR-RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            RI V D+QES H+ +YR R ++QL IFADD+ PRW+     +D  T+A +DKFGN+  +R
Sbjct: 970  RIIVTDVQESVHWVRYRPRSDSQLVIFADDTNPRWIIHLAVLDASTVAVSDKFGNVTILR 1029

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKME 1087
            LP +V D+IE+DP+G +  W++G L GA  K +
Sbjct: 1030 LPPNVIDDIEDDPSGNRALWDRGFLGGASQKCD 1062



 Score =  336 bits (862), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 161/240 (67%), Positives = 200/240 (83%), Gaps = 5/240 (2%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           MYLY++TLQ+ TGI  A++GNFSGTK  EI VARGK++ELLRP+ N+G++ TL++ E FG
Sbjct: 1   MYLYNITLQRATGITHAVHGNFSGTKQQEIAVARGKIIELLRPDPNTGKVYTLLTCEAFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +RS   FRLTGS KDY++VGSDSGR+V+LEY PSKNVF+K+ QETFGKSGCRRIVPGQY
Sbjct: 61  IVRSFMPFRLTGSNKDYLIVGSDSGRVVVLEYIPSKNVFEKVQQETFGKSGCRRIVPGQY 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAV+PKGRA MIGA EKQKLVY++NRD+ ARLTISSPLEAHKS+T+VY + G+D GFDNP
Sbjct: 121 LAVNPKGRAFMIGAVEKQKLVYIMNRDSQARLTISSPLEAHKSNTLVYHMVGVDVGFDNP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHV----SRKWSEPVDNGANMLV 235
           +FA IE+DY +ADQDSTG+AA  A + LT+YELDLGLNHV    +   +EP+   + ML+
Sbjct: 181 LFACIEMDYEDADQDSTGEAARGANQLLTYYELDLGLNHVHLSMTDTATEPLGLQSQMLL 240


>gi|354547430|emb|CCE44165.1| hypothetical protein CPAR2_503890 [Candida parapsilosis]
          Length = 1171

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 401/1253 (32%), Positives = 665/1253 (53%), Gaps = 136/1253 (10%)

Query: 2    YLYSLTLQQPTGIIAAINGNF--SGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFG 59
            YLY+LTL+ P+    ++ G F     +    +++   +L L     +G++ T  +  +F 
Sbjct: 9    YLYNLTLKPPSNYPHSVLGQFIPRAKQQQLALISSTHLLLLTSDPETGKLSTKTTQNLFA 68

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             + ++ + RL  +  D +V+ +DSG + I++Y P +N F  I Q    K+G  R  PG++
Sbjct: 69   VVNAVDKLRL--NDHDVLVLTTDSGNLSIIQYEPKRNEFVSICQMPMCKNGWSRSYPGEF 126

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLE-----AHKSHTIV-YSICGID 173
            LAVD + R +++GA EK+K +Y +   +  +L +SSP+E     A K  +++  S+  ++
Sbjct: 127  LAVDSQSRCILVGAVEKKKFLYKVEH-SGDKLELSSPVEYASVVAQKKQSLLCLSMISLE 185

Query: 174  CGFDNPIFAAIELDYSEADQDSTGQAASEAQKNL-TFYELDLGLNHVSRKWSEP--VDNG 230
              F NP+FAA+E D             +E Q  L  +YE D G+NHV ++ S    V N 
Sbjct: 186  SAFSNPLFAALEYD-------------NEQQVTLLNYYEFDQGMNHVVKRKSRVAIVAND 232

Query: 231  ANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH- 289
            AN LV VPG      GVLVC EN++IY   G   +   +PRR      +  +IV+  TH 
Sbjct: 233  ANYLVPVPGH---IGGVLVCGENWIIYDKLGSESIALPLPRRK----SQSSVIVTHVTHV 285

Query: 290  -RQKTL-FFFLLQTEYGDIFKVTLEHD--NEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
             ++K+  FF LLQ E+GD+F++ +++D   E V +++I YFDTIPV  S+ + K+G  FA
Sbjct: 286  LKKKSYGFFILLQNEFGDLFRLVIDYDYDRELVKDIEISYFDTIPVCYSLSIFKNGLCFA 345

Query: 346  ASEFGNHALYQFQAIGA---------DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI 396
                 +  LYQF+ +G          +  ++  S  L  T+E  + V F+ +GL NL  I
Sbjct: 346  NCVNRSQLLYQFEKLGEEIGEEGVGINRRIQMDSIPL--TKE--KVVEFKLKGLDNLALI 401

Query: 397  EQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSA 456
            + VESL PI D  + N          TL     +S L+ +  G   + +  S  P  P+ 
Sbjct: 402  DVVESLSPITDSTLIN---------DTLVTLSTKSKLKSIVHGTPTTTLVESSFPIKPTN 452

Query: 457  VWTVKKNVNDEFDAYIVVSFNNA--TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSL 514
            V+T K + +   D Y+V++   A  TLVLSIGE +EEV+DS F+   P++AV  +G  S+
Sbjct: 453  VFTAKTSADAMDDEYLVITSTLAFKTLVLSIGEVIEEVNDSKFVMDQPTVAVQQVGKSSI 512

Query: 515  MQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD-MTGQLL 573
            +QV+ +G+RHI    ++  W  P   TI    +N  QV++ +S  EL+YFE D    QL 
Sbjct: 513  VQVYSNGLRHINGKKKVTNWYPPAGITITHATTNNQQVLLGMSNLELVYFETDPEDDQLR 572

Query: 574  EVE-KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSS 632
            E + + E+S  +  + I      +++S F  VG  D TI ++SL   +C+Q+ S+Q++SS
Sbjct: 573  EYQDRLEVSSPIRSMCIP-----KEQSSFAVVGCSDETISVVSLQSQNCLQVKSLQALSS 627

Query: 633  PPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLR 692
               SL+ L             +P++  ++ G+ NGV  RT +D   G+LSD+R ++LG +
Sbjct: 628  SANSLVML-----------THNPSTTLIHIGMDNGVYVRTKIDTFNGKLSDTRIKYLGPK 676

Query: 693  PPKLFSVVVGGR-AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSS-DQCVEGVV 750
            P  L  + +      +L +S++PW+GY ++G++  TPL    +   ASF S D   EG+V
Sbjct: 677  PVTLNELKLSDDITGVLAISTKPWIGYFYQGKYRCTPLLDIDIINGASFKSEDIGGEGIV 736

Query: 751  SVAGNALRVFTIERLGETFNE------TALPLRYTPRRFVLQPKKKLMVIIETDQGALTA 804
             +  + L +F++ +    F+       T L LRYTPR+          ++   D   L A
Sbjct: 737  GIYDDNLVIFSVGKEDSIFDPNQELTVTELNLRYTPRK----------IVKGGDDDKLFA 786

Query: 805  EEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRV 864
             E E          G+      N+ +    D EN  DP   E +G+ +       SC+++
Sbjct: 787  SEVEM---------GINTPYVSNLTK----DVENGVDPEYYEAFGFERGPG--CASCVQL 831

Query: 865  LDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHI 924
            ++      +  LE   ++    +  + F+  ++   L VG  K      + N+      +
Sbjct: 832  IENGEIKQS--LEFVKDQRIVDMVKIQFNKNQY---LIVGVTK-----QEENL------L 875

Query: 925  YRF-VEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL- 982
            Y F +++ ++L+ +HKTQ++ +P  +  FQ RLL   G  + LY+LG+++LLRK   ++ 
Sbjct: 876  YTFKIDKKRNLQYIHKTQLKYVPQVMEVFQNRLLVASGNAISLYELGQRQLLRKSLTRID 935

Query: 983  FPNTIVSINTY-RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTM 1041
            F  +IV ++   RDRI + D   S  F K+  +ENQ    ADD V R +TA   +D+DT+
Sbjct: 936  FVQSIVKVSPQPRDRILLADSANSIVFAKFDNEENQFIPVADDVVKRNITAWKQLDYDTI 995

Query: 1042 AGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ-GKLNGAPNKMEEIVQFHVGDVVTS 1100
             G DKFGNI+  RL ++ S ++++D T  K   +    LN    K++ + Q+++ D++TS
Sbjct: 996  IGGDKFGNIFVTRLDREESKQVDQDWTVLKQAAQNSSNLNSCVFKLQNLCQYYIPDIITS 1055

Query: 1101 LQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMH--MRQEHPPLCGRDHM 1158
             Q  S   GG E +IY  VMG++G ++   S+ +++    L++   +  +   + G++H 
Sbjct: 1056 FQLGSFNLGGEECIIYTGVMGTIGVLIPLLSKSEIELVHDLQLQIGIWNDGVNVAGKNHG 1115

Query: 1159 AYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
              RS Y P K+V DGD  E +  + LD++ KIA +L+++ GEI KKL +IRN+
Sbjct: 1116 KLRSYYNPRKNVYDGDFLELYFAIPLDVKVKIAKKLNKSVGEIEKKLNDIRNR 1168


>gi|448528339|ref|XP_003869702.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis Co 90-125]
 gi|380354055|emb|CCG23569.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis]
          Length = 1170

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 400/1252 (31%), Positives = 658/1252 (52%), Gaps = 135/1252 (10%)

Query: 2    YLYSLTLQQPTGIIAAINGNF-SGTKTPEIVVARGKVLELL--RPENSGRIETLVSTEIF 58
            YLY+LTL+ P+    +  G F   +K  ++ +     L LL   PE +G++   VS  +F
Sbjct: 9    YLYNLTLKPPSNYPHSALGQFIPKSKQQQLALISSSHLTLLIADPE-TGKLSVQVSQNLF 67

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              + ++ + R   +  D +V+ SDSG + I++Y P +N F  I Q    K+G  R  PG+
Sbjct: 68   AVVNAVDKLRF--NDHDVLVLTSDSGNLSIIQYEPKRNEFVSICQMPMCKNGWSRSYPGE 125

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLE------AHKSHTIVYSICGI 172
            +LAVD + R +++GA EK K +Y +    A +L +SSP+E        K   +  S+ G+
Sbjct: 126  FLAVDSQSRCILVGAVEKNKFLYKV-EPGAEKLELSSPVEYVSVVSRGKQPLLCVSLIGL 184

Query: 173  DCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE--PVDNG 230
            +  F NP+FAA+E D    +Q  T          L +YE D G+NHV +  S+   V N 
Sbjct: 185  ESAFANPLFAALEFD---CEQQVTL---------LNYYEFDQGMNHVVKHKSKVATVPND 232

Query: 231  ANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHR 290
            AN L  VPG      GVLVC  N+++Y   G+  +   + RR D    +  +I+S  TH 
Sbjct: 233  ANYLAPVPGH---IGGVLVCGANWIMYDKLGNESILLPLLRRKD----QTSVIISHVTHA 285

Query: 291  QKTL---FFFLLQTEYGDIFKVTLEHDN--EHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
             K     FF LLQ + GD+F++ +++D+  E + +++I YFDTIPV  ++ + K+G  FA
Sbjct: 286  LKKKNYGFFILLQNDLGDLFRLIIDYDSNRELIKDIEITYFDTIPVCYNLNIFKNGLCFA 345

Query: 346  ASEFGNHALYQFQAIG---ADPDVEASSSTLMET-----EEGFQPVFFQPRGLKNLVRIE 397
                 +  LYQF+ +G   ++ D+  + +  M+      E+ F+   F+ +GL NL  I+
Sbjct: 346  NCINRSQLLYQFEKLGEEISEEDIRINKTVQMDNIQLTKEKYFE---FKLKGLDNLALID 402

Query: 398  QVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAV 457
             VESL PI D    ++  ++     TL     +S L+ +  G   + +  SQLP  P+ +
Sbjct: 403  VVESLSPITD----SILNDD-----TLVTLSTKSKLKTIVHGTPTTTLVESQLPIKPTNI 453

Query: 458  WTVKKNVNDEFDAYIVVS--FNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLM 515
            +T K + N   D Y+V++   +  TLVLS+GE +EEV+DS F+   P++AV  +G  S++
Sbjct: 454  FTTKTSANAVDDEYLVITSTLSFKTLVLSLGEVIEEVNDSEFVLDQPTVAVQQVGKSSIV 513

Query: 516  QVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDM-TGQLLE 574
            Q++ +G+RHI  + ++  W  P   T+    +N  QV + LS  EL+YFE D    QL E
Sbjct: 514  QIYSNGLRHINGNKKVTNWYPPAGITVTHATTNNQQVFLGLSNLELVYFETDPDDDQLRE 573

Query: 575  VE-KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP 633
             + + E+S  +  + I+     +++S F  VG  D TI ++SL   +C+Q+ S+Q++SS 
Sbjct: 574  YQDRLEVSSPIRSMCIS-----KEQSSFAVVGCSDETISVISLQRQNCLQVKSLQALSSS 628

Query: 634  PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
              SL+ L              P +  ++ G+ NGV  RT +D   G+LSD+R ++LG +P
Sbjct: 629  ANSLIML-----------THKPGTTLIHIGMDNGVYVRTKIDTFNGKLSDTRIKYLGPKP 677

Query: 694  PKLFSVVVGGR-AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSS-DQCVEGVVS 751
              L  + +      +L +SS+PW+GY H+G++  TPL    +   A F S D   +G+V 
Sbjct: 678  VTLNELKLSDDIIGVLAISSKPWIGYFHQGKYRCTPLLDIDIINGAFFKSEDIGGDGIVG 737

Query: 752  VAGNALRVFTIERL------GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAE 805
            + G+ L +F++ +        + F  T L LRYTPR+           I++ D G L   
Sbjct: 738  IHGDNLVIFSVGKEDSLFDPNQEFTVTELNLRYTPRK-----------IVKGDDGKLFVS 786

Query: 806  EREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVL 865
            E E   K  + +    E              E+  DP   E +GY +       SC++++
Sbjct: 787  EVELGIKTPYLSNLTKEV-------------EDTVDPEYYEAFGYERDSG--CASCVQLV 831

Query: 866  DPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIY 925
                   T  LE   N+    +  + F+   +   L VG  K      + N+      +Y
Sbjct: 832  QDGEIKQT--LEFVKNQRIVDMIKIQFNKNLY---LVVGVTKH-----EDNL------LY 875

Query: 926  RF-VEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL-F 983
             F +++ K+L+ +HKT+++ +P  +  FQ RLL   G  + LY+LG+++LLRK   ++ F
Sbjct: 876  TFKIDKKKNLQYIHKTELKYVPQTMEVFQDRLLVASGNSISLYELGQRQLLRKSLTRIDF 935

Query: 984  PNTIVSINTY-RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMA 1042
              TIV +    RDRI + D   S  F K+ ++ENQ    ADD+V R +TA   +D+DT+ 
Sbjct: 936  IQTIVKVTPQPRDRILLADSANSIVFAKFDQEENQFVSMADDTVKRNITAWKQLDYDTVI 995

Query: 1043 GADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQG-KLNGAPNKMEEIVQFHVGDVVTSL 1101
            G DKFGNI+  RL ++ S +I+++ T  K   +    LN    K++ + ++++ D++TS 
Sbjct: 996  GGDKFGNIFVSRLDREESKQIDQNWTVLKQAAKNSPNLNSCVYKLQNLCEYYIPDIITSF 1055

Query: 1102 QKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS--HLEMHMRQEHPPLCGRDHMA 1159
            Q  S   GG E +IY  + G++G +L   S+ +++      LE+    +   + G++H  
Sbjct: 1056 QLGSFNLGGEECIIYTGLTGTIGILLPLISKSEIELLHDLQLEISAYNDKVNVAGKNHAK 1115

Query: 1160 YRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             RS Y P K++ DGD  E +  L LD + KIA  L+++ GE+ KKL +IRN+
Sbjct: 1116 LRSYYNPAKNIFDGDFLELYLNLPLDEKLKIAKRLNKSVGEVEKKLNDIRNR 1167


>gi|238880502|gb|EEQ44140.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 1168

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 391/1211 (32%), Positives = 634/1211 (52%), Gaps = 124/1211 (10%)

Query: 1    MYLYSLTLQQPTGIIAAINGNF-----SGTKTPEIVVARGKVLELLR-PENSGRIETLVS 54
            +YLY+LTL+ P+  I++I G F     S     ++V+     L+L    E +G++E   S
Sbjct: 36   IYLYNLTLKPPSYYISSIVGQFYKQDNSTKNAQQLVLVSSTTLQLFEINEETGKLELQSS 95

Query: 55   TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY-NPSKNVFDKIHQETFGKSGCRR 113
              + G I S+ +  L  S+ D +V+ SDSG + IL+Y N +K    KI QE   K+G  R
Sbjct: 96   QNLLGIINSIEKICL--SEVDGVVITSDSGNLSILQYDNKTKKFISKI-QEPMTKNGWGR 152

Query: 114  IVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGID 173
               G+ LA+DP+ R +++ A EK KL Y +  +++    +SSPLEAH    +   I  ++
Sbjct: 153  NYVGENLAIDPENRCILVAAMEKNKLFYKIESNSSGSKELSSPLEAHSKQVLCLKIVALN 212

Query: 174  CGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-----SEPVD 228
               +NP+F A+EL               E +  + +YELD GLNHV +K      S+P+ 
Sbjct: 213  TDHNNPLFGALEL-------------TPEKKCIINYYELDQGLNHVVKKKPNSSNSDPLP 259

Query: 229  NGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAT 288
            N  N L+ +PG      G++VC  N+  Y     P +   +PRR     +   +IV+  T
Sbjct: 260  NDVNYLIPLPG---HIGGMVVCGTNWCFYDKLDGPRIYLPLPRRNGQTQDS--IIVNHVT 314

Query: 289  H-RQKTLFFFLLQTEYGDIFKVTLEH--DNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
            H  +K  FF LLQ   GD+FK+T+++  D E +  + I YFDTIP   S+ + K+G+LFA
Sbjct: 315  HVLKKKKFFILLQNALGDLFKLTVDYDFDKEIIKNISITYFDTIPPALSLNIFKNGFLFA 374

Query: 346  ASEFGNHALYQFQAIGAD---PDVEASSS---TLMETEEGFQPVFFQPRGLKNLVRIEQV 399
                 +  LYQF+ +G D    ++  +SS   +L    E      F+ +GL NL  I+ +
Sbjct: 375  NVLNNDKLLYQFEKLGDDLTEGELVINSSDYESLNSVRESVTS--FKLKGLDNLALIDVL 432

Query: 400  ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
            E+L PI D +I +       ++ TL      S ++ +  G+  + +  S LP  P+ ++T
Sbjct: 433  ETLSPITDSKIID------SKLVTLSS---HSYVKSITHGVPTTTLVESPLPITPTDIFT 483

Query: 460  VKKNVNDEFDAYIVV--SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQV 517
             K ++    D Y+V+  S ++ TLVLSIGE VE+V DS F+   P++AV  +G  S++Q+
Sbjct: 484  TKLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGIASVVQI 543

Query: 518  HPSGIRHIRE---DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT-GQLL 573
            + +GI+H+R    + +  +W  P   TI    +N  QV+IALS   ++YFE+D T  QL+
Sbjct: 544  YSNGIKHVRMVNGNKKTTDWFPPAGITITHATTNNQQVLIALSNLSVVYFEIDATDDQLI 603

Query: 574  EVE-KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSS 632
            E + + E++  +  + I       ++S F  +G  D TI+++SL   +C++I S+Q++S+
Sbjct: 604  EYQDRLEIATTITAMAIQE--NISEKSPFAIIGCSDETIQVVSLQEHNCLEIKSLQALSA 661

Query: 633  PPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLR 692
               S           G++   H        G++NGV  R  +D + G LS+SR +++G +
Sbjct: 662  NSSS----LKMLKSSGKETHVH-------IGMENGVYARIKIDTINGNLSNSRVKYIGSK 710

Query: 693  PPKL----FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVE 747
            P  L    FS  + G   +L +SS PW+ Y++R  F +TPL    +   +SF S D   E
Sbjct: 711  PVSLSVIKFSSEIEG---ILAISSAPWISYLYRDSFKITPLLEIDITNGSSFISEDIGGE 767

Query: 748  GVVSVAGNALRVFTIERLGETFNET------ALPLRYTPRRFVLQPKKKLMVIIETDQGA 801
            G+V +  N L +F++ +    F+ +         LRYTPR+ +            T    
Sbjct: 768  GIVGIKDNNLIIFSVGKEDSVFDPSQDLTIVTTKLRYTPRKMI------------TYGNR 815

Query: 802  LTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSC 861
            L   E E   +  F+        N N D  EN  DE+ Y       +GY + + + W SC
Sbjct: 816  LFISESEYNVQGPFKC-------NINGDVKENV-DEDYYGA-----FGY-EWKQNSWASC 861

Query: 862  IRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTL----LAVGTAKGLQFWPKRNI 917
            I+V+D +S      L+L  NE+  S+  V+F+     ++    L VG        P    
Sbjct: 862  IQVVDSKSNQVIQSLQLDGNESIVSMSAVSFNKTSTPSVPASHLVVGVCTNQTILPNS-- 919

Query: 918  VAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK 977
                 ++Y F    K L+L+HKT+++ IP  L  FQ +LL   G  +RLYD+G+K+LL+K
Sbjct: 920  -YDKSYLYTFKIGKKHLQLVHKTELDHIPQVLENFQDKLLVASGNHIRLYDIGQKQLLKK 978

Query: 978  CENKL-FPNTIVSINTYRDRIYVGDIQE-SFHFCKYRRDENQLYIFADDSVPRWLTAAHH 1035
                + F   I  I    +RI + D  + S  F K+   +NQ   FADD + R +T+  +
Sbjct: 979  STTIIDFSTNINKIIPQTNRIIICDSHKSSIVFAKFDESQNQFVPFADDVMKRQITSIMN 1038

Query: 1036 IDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVG 1095
            +D DT+ G DKFGNI+  R+ +D+S + ++D T   +K + G LN  P K++ +++FH+G
Sbjct: 1039 LDIDTLIGGDKFGNIFVTRIDEDISKQADDDWT--ILKTQDGILNSCPYKLQNLIEFHIG 1096

Query: 1096 DVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGR 1155
            D++TS     L   G ESVIY  + G++G ++   S+ +V+   +L+++M+Q    L G+
Sbjct: 1097 DIITSFNLGCLNLAGTESVIYTGLQGTIGLLIPLVSKSEVELLFNLQLYMQQSQNNLVGK 1156

Query: 1156 DHMAYRSAYFP 1166
            DH+  RS Y P
Sbjct: 1157 DHLKLRSYYNP 1167


>gi|70952260|ref|XP_745310.1| splicing factor 3b, subunit 3, 130kD [Plasmodium chabaudi chabaudi]
 gi|56525593|emb|CAH80831.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium chabaudi
           chabaudi]
          Length = 530

 Score =  560 bits (1444), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 268/529 (50%), Positives = 368/529 (69%), Gaps = 15/529 (2%)

Query: 3   LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
           LY LTLQ+PT I   + GNFSG K  EI+VA+G+VLELLR +  G++  +VS +IFG IR
Sbjct: 4   LYHLTLQKPTAITRTVYGNFSGPKAHEIIVAKGQVLELLRADKQGKLSVIVSKDIFGIIR 63

Query: 63  SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
           SL  FRLTGS KDYI +GSDSGR+VIL+Y+  KN F ++H ET+GKSG RRIVPG+Y+AV
Sbjct: 64  SLEIFRLTGSNKDYIAIGSDSGRLVILKYDDEKNDFIRVHCETYGKSGIRRIVPGEYIAV 123

Query: 123 DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
           DPKGRA+M+ A EKQK VY+LNRD    LTISSPLEAHKSH+I +++ G++ GF+NP+F 
Sbjct: 124 DPKGRALMLCAIEKQKFVYILNRDNKENLTISSPLEAHKSHSICHAVVGLNVGFENPMFV 183

Query: 183 AIELDYSEADQDSTG-------------QAASEAQKNLTFYELDLGLNHVSRKWSEPVDN 229
           +IE +Y   D++ T              Q     +K L F+E+DLGLNHV +K + P+D 
Sbjct: 184 SIEQNYETLDKEVTNGNIQLSSNPNEDQQIMEYPKKGLCFWEMDLGLNHVIKKHTIPIDI 243

Query: 230 GANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH 289
            A++L+ +PGG  GPSG++VC EN+++YK   H DV    PRR ++  E+ + IV    H
Sbjct: 244 TAHLLIPLPGGQQGPSGLIVCCENYLVYKKIDHDDVYCSYPRRLEVGEEKNISIVCWTIH 303

Query: 290 RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
           R KT FF L+Q+EYGD++K+ + H++  V E+  KYFDT+P+  S+CVLKSG LF A+EF
Sbjct: 304 RIKTFFFILIQSEYGDLYKIEVNHEDGIVKEIICKYFDTVPIANSICVLKSGALFVAAEF 363

Query: 350 GNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR 409
           GNH  YQF  IG D +    +S     +     + F+ + LKNL  ++Q+ SL PI+DM+
Sbjct: 364 GNHFFYQFSGIGNDSNESMCTSNHPSGKNAI--IAFKTQKLKNLYLVDQIYSLSPIIDMK 421

Query: 410 IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
           I +      PQI+ LCGRGPRSSLRIL+ GL++ E+A ++LPG P  +WT+KK+ + E+D
Sbjct: 422 ILDAKNSSLPQIYALCGRGPRSSLRILQHGLSIEELANNELPGKPKYIWTIKKDNSSEYD 481

Query: 470 AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            YI+VSF   TL+L IGETVEEV DS  L    ++ ++L+ D+S +QV+
Sbjct: 482 GYIIVSFEGNTLILEIGETVEEVYDSLLLTNVTTIHINLLYDNSFIQVY 530


>gi|193785523|dbj|BAG50889.1| unnamed protein product [Homo sapiens]
          Length = 503

 Score =  544 bits (1402), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 256/506 (50%), Positives = 355/506 (70%), Gaps = 10/506 (1%)

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
            +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  F
Sbjct: 1    MSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVF 60

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENGN 825
            N+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E   
Sbjct: 61   NQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDEREL 120

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
               +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAAF
Sbjct: 121  A-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAF 175

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            S+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE +
Sbjct: 176  SVAVCRFSNTGEDWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 234

Query: 946  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQES 1005
            P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QES
Sbjct: 235  PAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQES 294

Query: 1006 FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE 1065
            F + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++E
Sbjct: 295  FIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDE 354

Query: 1066 DPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGA 1125
            DPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G 
Sbjct: 355  DPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGI 414

Query: 1126 MLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLD 1185
            ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  +
Sbjct: 415  LVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPN 474

Query: 1186 LQRKIADELDRTPGEILKKLEEIRNK 1211
             Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 475  KQKNVSEELDRTPPEVSKKLEDIRTR 500


>gi|53136520|emb|CAG32589.1| hypothetical protein RCJMB04_30d19 [Gallus gallus]
          Length = 503

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 257/506 (50%), Positives = 355/506 (70%), Gaps = 10/506 (1%)

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
            +SSR WL Y ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  F
Sbjct: 1    MSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVF 60

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENGN 825
            N+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E   
Sbjct: 61   NQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDEREL 120

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
               +      +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAAF
Sbjct: 121  A-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAF 175

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            S+    F +      + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE +
Sbjct: 176  SVAVCRFSNTGEEWYVLVGVAKDLILNP-RSVAGGFVYTYKLVNGGEKLEFLHKTPVEEV 234

Query: 946  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQES 1005
            P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QES
Sbjct: 235  PAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQES 294

Query: 1006 FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE 1065
            F + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++E
Sbjct: 295  FIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDE 354

Query: 1066 DPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGA 1125
            DPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G 
Sbjct: 355  DPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGI 414

Query: 1126 MLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLD 1185
            ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  +
Sbjct: 415  LVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPN 474

Query: 1186 LQRKIADELDRTPGEILKKLEEIRNK 1211
             Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 475  KQKNVAEELDRTPPEVSKKLEDIRTR 500


>gi|84996279|ref|XP_952861.1| splicing factor 3b subunit [Theileria annulata strain Ankara]
 gi|65303859|emb|CAI76236.1| splicing factor 3b subunit, putative [Theileria annulata]
          Length = 1340

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 366/1142 (32%), Positives = 574/1142 (50%), Gaps = 201/1142 (17%)

Query: 204  QKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
            +K L+F+E+DLGLNHV +K + PVD  A++LV VP    GP GVLVC EN+++YKN  HP
Sbjct: 266  RKGLSFWEMDLGLNHVVKKVTLPVDLSAHLLVPVP---GGPGGVLVCCENYLVYKNLEHP 322

Query: 264  DVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKI 323
            DV    PRR ++   + +LI + + H+ K  FF LL +EYGD++K+ L HD+  VSE+ I
Sbjct: 323  DVFCSYPRRLEMSESQTLLITNYSVHKMKDFFFILLLSEYGDLYKIELSHDDNTVSEVVI 382

Query: 324  KYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI-GADPDVEASSSTLMETEEGFQP 382
            +YFDT+ V  SMC+L+SGYLF  SE G+H LYQF ++   D DV  +S   +  +     
Sbjct: 383  RYFDTVDVGISMCILRSGYLFIGSESGDHKLYQFTSLDNGDKDVICTS---LHPDAKNAI 439

Query: 383  VFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAV 442
            + F+PR L+NLV ++++ S+  ++DM++A++       IF  CGR   S L+ LR G   
Sbjct: 440  IAFKPRVLQNLVVVDRMSSMGLVVDMKVADVMGLNNYDIFVACGRWYNSRLKCLRYGFNT 499

Query: 443  SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTP 502
             E+A ++LPG P  V+T+ K++   FD YI++SF   TLVLSIGE VEEV+DS FL +  
Sbjct: 500  EELAFNELPGRPKHVFTI-KSLESNFDEYIIISFQGNTLVLSIGEAVEEVTDSFFLTSIT 558

Query: 503  SL------------------------------AVSLIGDDSL-----MQVHPSGIRHIRE 527
            +L                               V + G   +     +Q+H  G R++  
Sbjct: 559  TLHCCYMSYRNGVSSSGVGGVSGVSGVGTVTNGVPVTGGTGITRGIYVQIHDGGYRYLSG 618

Query: 528  DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG--QLLEVEKHEMSGDVA 585
            D  I EW+    + +    +N  Q+++ L+GGE+IYF++  T   +L+EV +  +S ++ 
Sbjct: 619  D-IIKEWKVQSTKRVKLADNNDTQLILVLTGGEIIYFQLTDTEVPELVEVGRRNLSTEIT 677

Query: 586  CLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQ 643
            CL I   P    ++ F   GS DN +RI+ LD +  +++ S Q +  +S PES+  L   
Sbjct: 678  CLAIQH-PNSGTKAEFCCCGSIDNIVRIMKLDKN--LKLCSSQILGNNSLPESVTLLT-- 732

Query: 644  ASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG 703
                          ++L  GL NGVL R  +DM+ G L D  SRF+G +P KL  +    
Sbjct: 733  -----------NDEIYLYVGLNNGVLIRNTLDMI-GNLIDQESRFMGTKPLKLKLLQYME 780

Query: 704  RAAMLCLSSRPWLGYIHRGRFL---LTPLSYE------------------------TLEY 736
            +  ++ +S + ++   +        + PL  +                        T++ 
Sbjct: 781  KQCLILMSIKTYIIIPNYPNNNNLDILPLYIQSNVIDTVDTRDSIRDGTRDSMRDNTVDS 840

Query: 737  AASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPK-------- 788
              +F+S  C+ G V + GN L++F     G+ F+E  +PL YTPR+ +L P         
Sbjct: 841  IDTFNSLLCLNGFVCILGNNLKIFRCIINGDVFSEITIPLEYTPRKLLLLPSNLCNIPST 900

Query: 789  -------------------------------------------KKLMVIIETDQGALTAE 805
                                                         L++I+E+D  +   E
Sbjct: 901  QMGVHGVQGMGSQMGVQSIGSQGVGSQMTSGIGSQGISMMGKLNVLILIVESDYNSYNIE 960

Query: 806  EREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVL 865
            + E   KE       G+N                ++ +  + Y   +A   KW SCIR++
Sbjct: 961  QVEEINKEMMSIKLEGDN----------------FEVMELKNY---RAGVGKWSSCIRII 1001

Query: 866  DPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKR----NIVAGY 921
            +P +  T   L   +NEAA +  T   +  +   LL VGT K    +P      + V   
Sbjct: 1002 NPINLETIAKLLFTENEAATTAYTCILNSIQ---LLIVGTIKNAHLYPTHMDVNDEVESC 1058

Query: 922  IHIYRF------VEEGKSLELLHKTQVEGIPLALCQFQGR-LLAGIGPVLRLYDLGKKRL 974
            I +Y +      +  G +++LLH T  +G       ++ + LL  IG  LR+Y LGKK++
Sbjct: 1059 IRVYEYDSNYNNLVNGFNIKLLHITNTKGWIRCFNNYENKLLLCAIGSKLRMYSLGKKQM 1118

Query: 975  LRKCENK-LFPNTIVSINTYRDRIYVGDIQESFHFCK---YRRDENQLYIFADDSVPRWL 1030
            L K E++ L  +  + I     RIY GDI+ES    +   Y  D  +  +    + PRWL
Sbjct: 1119 LLKGEHRSLTSHGFMDIKVIGSRIYCGDIRESVQLLRIKFYGEDLGEFELTTTSTGPRWL 1178

Query: 1031 TAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV 1090
            ++   +D+ T+   DKF +I+  R+P +      ED                 N  E   
Sbjct: 1179 SSMELLDYSTVIAGDKFDSIFVSRVPHN------EDVV-------------RSNYFEYHN 1219

Query: 1091 QFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP 1150
            QFH+GD+VTS Q+  + P   E V+Y T+MGS+G ++ F S+D++DF  HLEM M  +  
Sbjct: 1220 QFHLGDIVTSFQRVRINPIHSEVVLYTTLMGSIGVLVPFVSKDELDFLQHLEMLMCNQID 1279

Query: 1151 PLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
             + GR+   +RS YFPV++++DGDLCE +  ++LD +  IA++L+    EI+KKL+ IRN
Sbjct: 1280 TVTGREVQMFRSYYFPVQNIVDGDLCEMY--MTLDDKYNIANQLNLKVNEIIKKLKNIRN 1337

Query: 1211 KI 1212
            +I
Sbjct: 1338 RI 1339



 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 117/211 (55%), Positives = 154/211 (72%)

Query: 3   LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
           LY+LTL++PTG+ A++ G+FS  K  E VVAR  +LEL    + G+++ LVS E FG +R
Sbjct: 4   LYNLTLKKPTGVTASVQGSFSAPKAQEFVVARSHILELYSLNSLGKLQQLVSVEAFGIVR 63

Query: 63  SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
           +LA FRLTG+ KDY+ V SDSGR+VILEY+   N F +IH ET+GK+G RRIVPGQYLAV
Sbjct: 64  ALAAFRLTGALKDYLAVTSDSGRLVILEYSTQTNSFKRIHSETYGKTGVRRIVPGQYLAV 123

Query: 123 DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
           DPKGRA+MIGA E+QK VY+LNRDT A LTISSPLEAHKSH+I + +  ++ G++NP+FA
Sbjct: 124 DPKGRAIMIGAIERQKFVYILNRDTKANLTISSPLEAHKSHSICFDLVALEVGYENPMFA 183

Query: 183 AIELDYSEADQDSTGQAASEAQKNLTFYELD 213
           ++E  Y   D         + + NL   +LD
Sbjct: 184 SLEQSYENVDAMQIDINTPQLESNLNTMDLD 214


>gi|344300987|gb|EGW31299.1| hypothetical protein SPAPADRAFT_140061 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 1107

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 381/1234 (30%), Positives = 627/1234 (50%), Gaps = 154/1234 (12%)

Query: 1    MYLYSLTLQQPTGIIAAINGNF--SGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEI 57
            ++LY+LTL+  +     + G F      T  +V+     ++L++P  ++G+++ +   ++
Sbjct: 5    LHLYNLTLKDSSHYTHTLLGQFHPKDPATQFLVLISPTHIDLVQPNPDTGKLQLIHHQKV 64

Query: 58   FGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPG 117
             G I   +  R+   + D++VV SDSG + +L+++ +K  F         K+G  R  PG
Sbjct: 65   IGVINQASVIRV--EELDHVVVTSDSGNLSVLKFDGTK--FVPAMNIGMTKNGWGRTYPG 120

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            ++LAVDP  R V   A EK KL+Y ++ +      +SSPLEAH  + +   +C +D  ++
Sbjct: 121  EFLAVDPSNRCVFTSAVEKNKLIYKVDSE------LSSPLEAH-FNGVCLGVCALDTVYE 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTV 237
            NP FA +E+               E Q  L +Y LDLGLNH+ +  S+P+    N ++ +
Sbjct: 174  NPCFAVLEM---------------EDQVALNYYHLDLGLNHIIKSKSDPIPQDVNYVIGL 218

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERG--VLIVSAATHR-QKTL 294
            PG      GVLV   N++    +     R   P    LP  +G   +I S   HR +K  
Sbjct: 219  PGH---IGGVLVSGTNWMCIDRKNE---RKFFP----LPRRKGQDTMITSHVLHRLKKNE 268

Query: 295  FFFLLQTEYGDIFKVTLEHDN--EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            FF L+Q+  GD++KV +E+DN  E V ++ + YFDTIP   S+ + KSG+LFA     + 
Sbjct: 269  FFILIQSSLGDLYKVVVEYDNDREVVKDVIVSYFDTIPPCISLNIFKSGFLFANVLNNDK 328

Query: 353  ALYQFQAIGADPDVEASSSTLME-TEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
             LYQF+ +G +      SS   + TEE    V    + L NL  I+  ESL PI+D +  
Sbjct: 329  LLYQFEKLGDESTTVIKSSQYPDHTEE----VNITLKALDNLALIDIHESLSPILDAK-- 382

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
                +    +  L     +   R    G+  +E+  + LP  P++V+T K       D+Y
Sbjct: 383  ----QTPSNMLVLSSHYLKQVTR----GIPTTEIVSTPLPFTPTSVYTTKLTQASVHDSY 434

Query: 472  IVV--SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG 529
            +VV  S  + TLVLSIGE VEEV DS  +    +L++  +G  SL+QV+ +GIR I    
Sbjct: 435  LVVTSSLASQTLVLSIGEVVEEVPDSKLVTDQHTLSIQQMGKSSLVQVYTNGIRQIGH-- 492

Query: 530  RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-EMSGDVACLD 588
            ++ +W +P   T+    +N  QV+IA+S  E++YFE+D+  QL+E ++  E++  +  L 
Sbjct: 493  KVTDWFSPAGITVTHASTNANQVIIAMSNCEVVYFEIDVDDQLIEYQQRLELTSSITSLA 552

Query: 589  IASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGG 648
            I+       RS    +G  D TI+++SL   DC+ + S+Q++S+   SL+ +E    +  
Sbjct: 553  ISDT-----RSDVAVIGCADETIQVVSLAESDCLDVKSLQALSANASSLVMIENTVHI-- 605

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                          G++NGV  RT +D+   QL D+R ++LG RP  +  + VG  A +L
Sbjct: 606  --------------GMENGVYARTKLDI--KQLKDTRVQYLGSRPVSMSRISVGDTAGVL 649

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI--ERLG 766
             +SS  W+GY H   + + PL    +  AASF+S+  +EG+V + GN L +F++  E   
Sbjct: 650  AISSSAWIGYTH-DTWRIMPLLDIDISSAASFNSED-IEGIVGIHGNELVIFSLGTEDGF 707

Query: 767  ETFNETALP---LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGEN 823
            +  +E  +    LRYTPRR V+  +K  + +IE++ G  +    +   ++ ++A G    
Sbjct: 708  DPSHEWTIKKSRLRYTPRRMVVDGEK--VYVIESEYGIKSPYHTQDTDQDYYDAFGYERG 765

Query: 824  GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEA 883
            G G                                 SCI+V+       +  LE      
Sbjct: 766  GPG--------------------------------ASCIQVVINEEVTQSIELE----HT 789

Query: 884  AFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE 943
            A S+  V F ++     L VG      + P  +    +++ Y+    G +LELLH+T++ 
Sbjct: 790  AISMTKVTFKNQP---CLVVGVTTKQTYLPTSHD-ECFLYTYKI---GDTLELLHRTKLT 842

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLF----PNTIVSINTYRDRIYV 999
              P  L  F  R+L   G  + LY+LG+ +LLRK  + L      N ++ I +   RI +
Sbjct: 843  IRPTVLIAFNNRVLVASGNHILLYELGQSQLLRKSASVLAYLAQINNVIHIES--SRIVI 900

Query: 1000 GDIQ-ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
             D    S  + K+    NQ   FADD + R +TA   +D+DT+   DKFGNI   R+ ++
Sbjct: 901  TDAHSSSISYAKFDTGLNQFVGFADDVIKRQVTAIVSVDYDTVISGDKFGNIRVSRVDEE 960

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            VS + +E      IK   G  N   +K++ +   +V D    + K+       + +++  
Sbjct: 961  VSKQTDEH--WSFIKQSDGLFNSTGSKLKSLASIYVHDTPIKMMKSK------DCIVWTG 1012

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQ 1178
            +MG++G+ +   +  +VD+   LE+ MR +   L  +DH+  RS Y PVK VIDGDL E 
Sbjct: 1013 LMGTIGSFIPLLTTSEVDWLRKLELAMRNQVVNLLEKDHLKSRSYYDPVKCVIDGDLLEM 1072

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            + +LS+D++  IA +++R+P EI KKLE +RN++
Sbjct: 1073 YYSLSMDVKLSIARQVNRSPSEIEKKLENLRNRV 1106


>gi|440294229|gb|ELP87246.1| splicing factor 3B subunit, putative [Entamoeba invadens IP1]
          Length = 1168

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 374/1244 (30%), Positives = 617/1244 (49%), Gaps = 114/1244 (9%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M   SLTL++ + + ++  G+FSGT + E+V+ R + L  +   +   IE L  T  F  
Sbjct: 1    MSYVSLTLEENSTVTSSCFGDFSGTNSIELVLIRAQTLLQIYRISEDSIELLTQTPTFSL 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            IR+++  ++    KDYI++GSDSG + +L Y+   N    IH E FGKSG RR+VPGQY+
Sbjct: 61   IRAISTIKIGNEGKDYILLGSDSGSVCLLSYDAHTNSLKTIHNEIFGKSGIRRVVPGQYI 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
              DP GRAVM+ A EKQK VYV+NR++   +TISSPLEA+KS++I + +  +D GFDNP+
Sbjct: 121  VADPSGRAVMVSAIEKQKFVYVMNRNSNGEVTISSPLEANKSNSICFDLAALDVGFDNPM 180

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG- 239
            FAAIE+DY+E  Q          +K +  YE+DLGLNHV RK +EP++  AN ++ +P  
Sbjct: 181  FAAIEVDYNE--QYLPHIKDRIVKKFIVLYEMDLGLNHVVRKSAEPINETANHIIPIPTL 238

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
              D   G+ +C+EN + + N GHP     IP + D    +  LIVS    R KT  F L+
Sbjct: 239  KEDVHLGMFICSENRISWYNPGHPIQSIEIP-KMDEETTQSTLIVSHVVLRMKTGHFILV 297

Query: 300  QTEYGDIFKVTLE-HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            Q+EYGD+F++  +  DN  +++LK+ YFDTI  T  M + K G++F ASEF +  LYQ  
Sbjct: 298  QSEYGDLFRIHFQTEDNGDITDLKLTYFDTIQSTLGMIISKKGHIFTASEFNDSHLYQIT 357

Query: 359  AIGADPDVEASSSTLMETEEG------FQPVFFQPR------------GLKNLVRIEQVE 400
            ++G D + E    T  E E         Q  FF  +             +++L  I   +
Sbjct: 358  SLG-DEESEEHEGTQQEVEMKEETNGMVQIPFFDAKKDQTPLKITRYDSVRHLDEISNFK 416

Query: 401  SLMPIMDMRIANLFEEEAPQIFTL-CGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
            S  PI  M +    +++    + L  GRGP S +++L+  +   E+A   LP +   V+ 
Sbjct: 417  SNAPITGMSVCYGDDKKTANKYILYTGRGPSSCVQVLKHQMKTLEVAEITLPAIAMGVYP 476

Query: 460  VKKNVNDEFDAYIVVSFNNATLVLSIGE-TVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            +++  + +   Y+VV F NAT +L I E  V+E  ++  + ++ S+ + ++ D + +QV 
Sbjct: 477  LQR--SKDVSEYLVVPFANATSILKISEDEVKETDETPVILSSYSVRIGMMPDGTFVQVL 534

Query: 519  PSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGE---LIYFEVDMTGQLLEV 575
               I  +    +I E    G   IV        VV+ +S G+   ++ F+ +  G L E+
Sbjct: 535  KEKI--VVYTSKIKEVSVVGD--IVCAAIVESFVVVGVSKGDDNVIMLFKYE-DGGLHEI 589

Query: 576  EKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPE 635
            E     G +  + I    E ++  +F AV   D  IRIL+L   +  + L+  SV     
Sbjct: 590  ESKGSFGKIRSVTI----ENKEVPKFCAVACEDGGIRILTLFNTETTKALTRVSV----- 640

Query: 636  SLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPK 695
                + +++++         +   + AGL +G L     D  +G++ ++   F+G++   
Sbjct: 641  ----ISLESAINDVKFGVLNSKQIIVAGLDDGKLAWCFFDSNSGEIEETNFEFVGVQNVN 696

Query: 696  LFSVVVGGRAAMLCLSSRPWL-GY--------IHRGRFLLTPLSYETLEYAASFSSDQCV 746
            L      GR      S   W+ GY           G+   TPL    +     F +    
Sbjct: 697  L------GRVYTTSESGEEWMVGYNGNGILLSTSNGQIKSTPLDQPNIYGVEGFKASFVD 750

Query: 747  EGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEE 806
              +  V+GN L++   E    + +   +PL  TPR+ V     +   ++  D  +  A  
Sbjct: 751  NPIALVSGNILKILVFENTTSSLSGVKVPLCMTPRKIVESETVEDTFVLCADNFSKYAN- 809

Query: 807  REAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLD 866
                                  D++  GDD                    +WVS I  +D
Sbjct: 810  ----------------------DEIIRGDD-------------------GEWVSSIYRMD 828

Query: 867  PRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYR 926
              +     + +   N  A     +   D  +   L VG A+     P +      I +Y+
Sbjct: 829  KEATKIELVTKFPQNVYALCGTLLTVSDSIY---LVVGLAEKYTSRPIK-FTNSSIAVYK 884

Query: 927  FVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNT 986
                  +++ L+ TQ E    ++  + GR+L GI   LR+Y++GKK+LLRK E +   + 
Sbjct: 885  V--NVDNIQYLYTTQTEYPVRSMAVYGGRVLCGINRQLRMYEIGKKQLLRKAELRQLASE 942

Query: 987  IVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADK 1046
            I  I+   ++I +  I +   F ++ + + +  I+A D++PRW   +  +   +  G+DK
Sbjct: 943  ISDIHVINNKIQLVGISDGISFVRFNQTKQEFDIYA-DTLPRWTVKSVALTPTSYIGSDK 1001

Query: 1047 FGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL 1106
            FG I+   L ++ ++E   +     +  E+   NGA  K   + +F++GD+ T      +
Sbjct: 1002 FGQIFVEGLDKE-TEENASNIFSSILSGEKTIYNGAKYKAVSLNEFYLGDIATGFVNCCV 1060

Query: 1107 VPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFP 1166
              G  +  I   ++G + A++  +   +++FF  LEMHMR  H  + GRDH+AYRS+  P
Sbjct: 1061 RIGAPQIFIVSHLLGGISALIPLNGFGEIEFFEQLEMHMRVRHQNVNGRDHIAYRSSVVP 1120

Query: 1167 VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            VK + DGDLCE F  L+ + +++IA E++R  GEI+KKL ++RN
Sbjct: 1121 VKGIFDGDLCELFEKLTEEEKKEIAGEMEREVGEIVKKLHDLRN 1164


>gi|389614684|dbj|BAM20371.1| spliceosomal protein sap, partial [Papilio polytes]
          Length = 541

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 262/539 (48%), Positives = 360/539 (66%), Gaps = 11/539 (2%)

Query: 683  DSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSS 742
            D+R+R+LG RP KLF V V G  A+L +SSR WLGY ++ RF LTPLSYE LEYAA FSS
Sbjct: 1    DTRTRYLGSRPVKLFKVRVHGAEAVLAVSSRTWLGYHYQNRFHLTPLSYECLEYAAGFSS 60

Query: 743  DQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGAL 802
            +QC EG+V+++ N LR+  +E+LG  FN+T LPL YTPR+FV+      ++++ETD  A 
Sbjct: 61   EQCAEGIVAISSNTLRILALEKLGAVFNQTYLPLDYTPRKFVINSDSNHIIVLETDHNAY 120

Query: 803  TAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKY--DPLSDEQYGYPKAESDKWVS 860
            T E ++  + +  +       G G  +Q    +  + +  D L +  +  PKA +  W S
Sbjct: 121  TEEMKKLRRVQMAQELREAATGGGPEEQQLANEMADAFLSDVLPENVFSSPKAGAGMWAS 180

Query: 861  CIRVLD------PRSANTTCLLELQDNEAAFSICTVNFHDKEHGTL--LAVGTAKGLQFW 912
             IRV++         A+T   L L+ NEAA S+C V +    H  L  L VG AK +   
Sbjct: 181  QIRVVEMGGGAGGAQASTLYKLPLEQNEAAVSMCIVYWTAHAHLGLPHLVVGVAKDMVLS 240

Query: 913  PKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKK 972
            P R+   G +H+Y+       LEL+HKT ++  P AL  F GRL+AG+G +LR+YD+G++
Sbjct: 241  P-RSCSEGSLHVYKIFSSTGKLELVHKTPIDDYPGALAAFNGRLMAGVGRMLRMYDIGRR 299

Query: 973  RLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTA 1032
            +LLRKCEN+  PN I  I T   RI+V D+QES    KY++ ENQL IFADD+ PRW+T 
Sbjct: 300  KLLRKCENRHIPNLIADIKTIGQRIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITN 359

Query: 1033 AHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQF 1092
               +D+DT+A +DKFGN+  +RLP  VSD+++EDPTG K  W++G LNGA  K E +V F
Sbjct: 360  TCVLDYDTVAMSDKFGNVAVMRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKGEVVVNF 419

Query: 1093 HVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPL 1152
            HVG+ VTSLQ+A+L+PGG E+++Y T  G+LGA+L F+SR+D D F HLEMHMR E+ PL
Sbjct: 420  HVGETVTSLQRATLIPGGSEALLYATAGGALGALLPFTSREDHDXFQHLEMHMRSENAPL 479

Query: 1153 CGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            CGRDH+++RS Y+PVK+VIDGDLCEQF +L    Q+ IA +L+RTP E  KKLE+ R +
Sbjct: 480  CGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTPAEGSKKLEDXRTR 538


>gi|28175094|gb|AAH31197.2| Sf3b3 protein, partial [Mus musculus]
          Length = 494

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/496 (50%), Positives = 348/496 (70%), Gaps = 10/496 (2%)

Query: 720  HRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYT 779
            ++ RF LTPLSYETLE+A+ F+S+QC EG+V+++ N LR+  +E+LG  FN+ A PL+YT
Sbjct: 2    YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 61

Query: 780  PRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGENGNGNMDQMENGD 835
            PR+FV+ P+   ++IIETD  A T    A+ ++   +E  EAAG  E      +      
Sbjct: 62   PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELA-AEMAAAFL 120

Query: 836  DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDK 895
            +EN    L +  +G PKA + +W S IRV++P   NT  L++L+ NEAAFS+    F + 
Sbjct: 121  NEN----LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNT 176

Query: 896  EHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGR 955
                 + VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE +P A+  FQGR
Sbjct: 177  GEDWYVLVGVAKDLILSP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGR 235

Query: 956  LLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDE 1015
            +L G+G +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QESF + +Y+R+E
Sbjct: 236  VLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNE 295

Query: 1016 NQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWE 1075
            NQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W+
Sbjct: 296  NQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWD 355

Query: 1076 QGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDV 1135
            +G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +D 
Sbjct: 356  RGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDH 415

Query: 1136 DFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELD 1195
            DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++ELD
Sbjct: 416  DFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELD 475

Query: 1196 RTPGEILKKLEEIRNK 1211
            RTP E+ KKLE+IR +
Sbjct: 476  RTPPEVSKKLEDIRTR 491


>gi|256075924|ref|XP_002574265.1| Splicing factor 3B subunit 3 5' fragment [Schistosoma mansoni]
          Length = 982

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/553 (48%), Positives = 356/553 (64%), Gaps = 11/553 (1%)

Query: 466  DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
            +E+DAYI+VSF NATLVLSIGETVEEV+DSGFL TTP+L  S +GDD+L+QV+P GIRHI
Sbjct: 431  EEYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHI 490

Query: 526  REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDV 584
            R D R+N WR PGK+TI K   NR QVVIAL+GGEL+YFE+DMTGQL E  E+ EM  DV
Sbjct: 491  RSDKRVNVWRAPGKKTITKCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPADV 550

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV-- 642
             C+ +  +P   +RSRFLAVG  DNT+RILSLDP DC+  L++Q + S PESL  +E+  
Sbjct: 551  ICMALGRIPANEQRSRFLAVGLADNTVRILSLDPSDCLTPLTMQGIPSTPESLCIVEMGT 610

Query: 643  -QASVGGEDGADHPAS----LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
             + S   +DG     S    L++N GL NGVL R ++D VTG+LSD+R+R+LG RP KLF
Sbjct: 611  NEPSPSTDDGESEATSSGGILYMNIGLINGVLLRVILDPVTGELSDTRTRYLGTRPVKLF 670

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
             +++ G  A+L +SSR WL Y ++ RF L PLSYE LEYA+ FSS+QC EG+V++  N+L
Sbjct: 671  RIMMQGGEAVLSVSSRSWLSYAYQNRFHLIPLSYEALEYASGFSSEQCPEGIVAICNNSL 730

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
            R+  +E+LG  FN+ + PL+YTPR+FV  P   +  IIETD  + T + +   K++  E 
Sbjct: 731  RIMALEKLGAVFNQISYPLQYTPRKFVFHPDSNITYIIETDHNSYTDDVKNTHKRQMAEK 790

Query: 818  AGMGENGNGNMDQMENGDDENKY--DPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL 875
                  G    D     +    +  + L +  +G PKA    W S +R   P   +T  +
Sbjct: 791  MIASALGGTPEDMALAKESAAAFLSENLPEAIFGAPKAGPGMWASLLRCFKPLDGSTCQI 850

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
            +    NEAA ++  V F++      L V   K L   P R+   G +  YR    G+ LE
Sbjct: 851  IRFPQNEAAHALTFVKFNNHPAEQFLVVALVKDLILNP-RSCSGGCLKTYRIWNNGERLE 909

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
             LH+T V+  P ALC FQGRLL G+G  LR+YDLGKK+LL+KCENK  P  I  I +   
Sbjct: 910  FLHETPVDDFPAALCAFQGRLLVGVGNRLRIYDLGKKKLLKKCENKHIPTLINGIYSVGS 969

Query: 996  RIYVGDIQESFHF 1008
            RI V D+QES H+
Sbjct: 970  RIIVTDVQESVHW 982



 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 160/240 (66%), Positives = 199/240 (82%), Gaps = 5/240 (2%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           MYLY++TLQ+ TGI  A++GNFSGTK  EI VARGK++ELLRP+ N+G++ TL++ E FG
Sbjct: 1   MYLYNITLQRATGITHAVHGNFSGTKQQEIAVARGKIIELLRPDPNTGKVYTLLTCEAFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            +RS   FRLTGS KDY++VGSDSGR+V+LEY PSKNVF+K+ QETFGKSGCRRIVPGQY
Sbjct: 61  IVRSFMPFRLTGSNKDYLIVGSDSGRVVVLEYIPSKNVFEKVQQETFGKSGCRRIVPGQY 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAV+PKGRA MIGA EKQKLVY++NRD+ ARLTISSPLEAHKS+T+VY + G+D GFDNP
Sbjct: 121 LAVNPKGRAFMIGAVEKQKLVYIMNRDSQARLTISSPLEAHKSNTLVYHMVGVDVGFDNP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHV----SRKWSEPVDNGANMLV 235
           +FA IE+DY +ADQDSTG+AA  A + LT+YE DLGLNHV    +   +EP+   + ML+
Sbjct: 181 LFACIEMDYEDADQDSTGEAARGANQLLTYYERDLGLNHVHLSMTDTATEPLGLQSQMLL 240


>gi|358255664|dbj|GAA57348.1| splicing factor 3B subunit 3, partial [Clonorchis sinensis]
          Length = 1055

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 273/631 (43%), Positives = 383/631 (60%), Gaps = 33/631 (5%)

Query: 612  RILSLDPDDCMQILSVQSVSSPPESLLFLE--VQASVGGEDGADH---PAS--LFLNAGL 664
            R + +  DDC+  L++Q + S PESL  +E  V    G  D  ++   PA+  L+LN GL
Sbjct: 424  RSIVIATDDCLAPLTMQGLPSTPESLCIVEMGVGEPSGPTDENENETLPATGILYLNIGL 483

Query: 665  QNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRF 724
             NGVL R ++D VTG+LSD+R+R+LG RP KLF +++ G  A+L +SSR WL Y ++ RF
Sbjct: 484  INGVLLRVILDPVTGELSDTRTRYLGTRPVKLFRIMMQGGEAVLSVSSRSWLSYAYQNRF 543

Query: 725  LLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFV 784
             L PLSYE LEYA+ FSS+QC EG+V++  N+LR+  +E+LG  FN+T+ PL+YTPR+ V
Sbjct: 544  HLIPLSYEALEYASGFSSEQCPEGIVAICNNSLRIMALEKLGAVFNQTSYPLQYTPRKMV 603

Query: 785  LQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKY---D 841
              P   +  IIETD  A T E +E  K++  E   +     G  ++++   +       +
Sbjct: 604  FHPDSNIAYIIETDHNAYTDEVKELRKRQMSEKM-IASAAGGTSEEIQLAKESAAAFLEE 662

Query: 842  PLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLL 901
             L +  +G PKA    W S +R L+P    T+ L+    NEAA ++  V F ++     L
Sbjct: 663  NLPENVFGAPKAGPGMWASLLRCLNPLDGTTSHLIRFPQNEAAHALSLVRFLNRPGELFL 722

Query: 902  AVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIG 961
             V   KGL   P R+   G +  YR    G  LE +H+T V+  P A+C FQGRLL G+G
Sbjct: 723  VVALVKGLNLSP-RSCSGGCLRTYRVWNNGDHLEFIHETLVDDFPAAVCAFQGRLLVGVG 781

Query: 962  PVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR-RDENQLYI 1020
              LR+YD+G+K+LL+KCENK  PN I  I     RI V D+QES  + +YR R ENQL I
Sbjct: 782  KRLRIYDMGRKKLLKKCENKHIPNLITGIYAIGSRIIVTDVQESAFWLRYRPRSENQLVI 841

Query: 1021 FADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN 1080
            FADD+ PRW+T    +D  T+A +DKFGN+  +RLP  V D+IEEDP+G +  W++G L 
Sbjct: 842  FADDANPRWITHLAVLDPSTVAISDKFGNVIILRLPNGVIDDIEEDPSGNRALWDRGFLG 901

Query: 1081 GAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSH 1140
            GA  K E +  F+VG+VVT+LQ+A+L+PGG E ++Y T+ G LG ++ FSSRD  DFF H
Sbjct: 902  GASQKAEVLCHFYVGEVVTTLQRATLIPGGSEGIVYATLSGGLGMLVPFSSRDAYDFFQH 961

Query: 1141 LEMHMRQE--HPPLCGRD------HMAY-----RSAYFPV-------KDVIDGDLCEQFP 1180
            LE+HMR E     +C         H+       R  Y          ++VIDGDLCE F 
Sbjct: 962  LELHMRSEGFASNICMSSSDDILRHLEMNLKPRRPVYLAALNVLTLKQNVIDGDLCEIFN 1021

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            +L    QR IA+E+D+ P +I K+LE+IR +
Sbjct: 1022 SLDPAKQRSIAEEMDKVPSDIAKRLEDIRTR 1052


>gi|149245793|ref|XP_001527373.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
            YB-4239]
 gi|146449767|gb|EDK44023.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
            YB-4239]
          Length = 1223

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 375/1304 (28%), Positives = 640/1304 (49%), Gaps = 188/1304 (14%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPE--IVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            LY+LT++  T    ++ G F   +  E  ++V+   +L     EN+G +  +V+  +FG 
Sbjct: 10   LYNLTVKCATNFSYSVIGRFVPHRKDEQLVLVSSSHMLLYYMDENTGSLINIVNQNLFGV 69

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +  + + +L  +Q D +V  SDSG + +L Y+     F  I Q+   K+G  +  PG+YL
Sbjct: 70   VNQVHKVQLNSNQ-DALVFTSDSGNLSVLTYDEHLKKFKSILQQPIAKNGWNKTYPGEYL 128

Query: 121  AVDPKGRAVMIGACEKQKLVYVLN----RDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            AVDP+ R +++GA E++KL++ +      + +A+  ISSP+       +   +  +   F
Sbjct: 129  AVDPQNRCILVGAVEREKLLFRIETTILENGSAKFEISSPITFQTRRLLCLKLVALYTEF 188

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNL-TFYELDLGLNHVSRK--WSEPVDNGANM 233
            +NP + A+E D              E Q+ L   YE D GLN++ ++   +  + N AN 
Sbjct: 189  ENPSYCALEFD-------------PEKQQTLFALYEFDQGLNYIVKQKVANSILPNDANY 235

Query: 234  LVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH--RQ 291
            L+ V G      GVL+C EN++ +      ++   +PRR +    +  +IV+  +H  ++
Sbjct: 236  LIPVLG---AIGGVLLCGENWIRFVKANKDNIVLPLPRRGN----QNTIIVNHVSHFLKK 288

Query: 292  KTLFFFLLQTEYGDIFKVTLEHDNEH--VSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
            K LF F +Q+  GDI  +  ++D++   V ++ I YFDTIP + S+ + KSG+LFA S  
Sbjct: 289  KGLFIF-MQSTLGDILTLVFDYDSDRSKVKDITITYFDTIPPSQSLNIFKSGFLFANSLN 347

Query: 350  GNHALYQFQAIGAD----PDVEASSSTLMETEEGFQPVF--FQPRGLKNLVRIEQVESLM 403
             N  LYQF  +GAD      V+ S+ T   + +  + +   F+ R L+NL  I+ +ESL 
Sbjct: 348  NNQVLYQFMKLGADLSDATSVKLSTVTDANSIDIAKKLHYKFEVRSLQNLSEIDTLESLS 407

Query: 404  PIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
            PI D ++        P    L        ++ +  G+  S +  S L   P+ V+T K +
Sbjct: 408  PITDSKL-------LPNSH-LATLSSNHKMKTVMAGIPTSVLVESPLTLTPTNVFTTKLS 459

Query: 464  VNDEFDAYIVV--SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSG 521
             +   D Y+V   + ++ TLV SIGE++E+V+DS F+   P++AV  +G  S++Q++  G
Sbjct: 460  EDSPNDEYLVFTSTLSSETLVFSIGESLEDVTDSKFVLDQPTIAVQQVGKASVVQIYAYG 519

Query: 522  IRHIR----EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT-GQLLEV- 575
            +RHI        ++ +W  P   +IV   +N  QV+IALS  E++YFE D T  QLLE  
Sbjct: 520  LRHISTKIGNSKKVTDWYPPAGISIVHAATNNKQVLIALSNSEVVYFETDPTDDQLLEYQ 579

Query: 576  EKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPE 635
            EK E++  V  + I+  PE   RS F  +G  D TI+++SL P  C+++ S+Q++SS   
Sbjct: 580  EKLEVTSPVTSMTIS--PE---RSSFAIIGCSDETIQVISLQPQSCLEVKSLQALSSKAN 634

Query: 636  SLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPK 695
            SL  L             +  + +++ G++NGV  RT +D  +G+LSD+R ++LG +P  
Sbjct: 635  SLAMLT------------NERTTYVHIGMENGVYARTKIDKFSGKLSDTRVKYLGSKPIA 682

Query: 696  LFSVVVGGRA-AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAAS-FSSDQCVEGVVSVA 753
            L  V +      +L +SSR W  + +RG + + PL    +++ A   S D   E +V   
Sbjct: 683  LEHVKLSEEVEGILAISSRTWAAFHYRGTYKIIPLLGVDIDHGACIISEDIGGEAIVGTK 742

Query: 754  GNALRVFTIERLGETF--NET----ALPLRYTPRRFVLQPKKKLMV------IIETDQGA 801
            GN L + +       F  N+T    +  LRY PR+ + Q   +  +      I+     +
Sbjct: 743  GNNLVILSAGEEDSLFDPNQTVTVVSTNLRYQPRKLLTQVGSRSYISQVGVNIVSPYATS 802

Query: 802  LTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSC 861
            LT   ++    E +E                               +GY + E  +  SC
Sbjct: 803  LTKVVKDKVDSEYYET------------------------------FGYER-ELGRSASC 831

Query: 862  IRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGY 921
            +++L  R    T  LE   NE    +    F+  E+   L VG           N V+  
Sbjct: 832  VQILQNRDVKQT--LEFNKNETIIGMTNAVFNKNEY---LIVGVI---------NTVSKK 877

Query: 922  IHIYRFV-EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN 980
              +Y F  ++ K L+  HKT++  IPL +  F  ++L   G  + LYDLG+++LLRK   
Sbjct: 878  STLYTFRPDKKKFLQYTHKTELNYIPLVIDWFNDKVLVCSGNSISLYDLGQRQLLRKSFT 937

Query: 981  KL--FPNTIVSINTYRDRIYVGDIQE-SFHFCKYRRDENQLYIFADDSVPRWLTAAHHID 1037
            ++    N +  +   ++R+   D Q  S  F K+  D NQ    ADD + R  TA   +D
Sbjct: 938  RIDFLKNIVKYLPLSQNRVVFADSQSASVVFAKFDADGNQFIPIADDVIKRNCTALSKLD 997

Query: 1038 FDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ--GKLNGAPNKMEEIVQFHVG 1095
            +DT+   DKFG I   RL    S +++++ +  K + ++     +    K+  I +F + 
Sbjct: 998  YDTIICGDKFGQISISRLDSQDSRQVDQEWSIFKARTKELGAGFSSCVCKLHNICEFFIP 1057

Query: 1096 DVVTSLQKASL----------------------------VPGG--GES----VIYGTVMG 1121
            D++TS Q +                              V GG  G+S    ++Y  + G
Sbjct: 1058 DIITSFQPSRSTKKMQNTNSFNAEGTTGYGDVGVGIDENVDGGNAGDSDDGCIVYTGIQG 1117

Query: 1122 SLGAMLAFSSRDDVDFFSHLEMHMRQ--EH------------PPLCGRDHMAYRSAYFPV 1167
            ++G ++   ++ +V+   +L++ +R+   H             PL G+DH+ +RS + PV
Sbjct: 1118 TIGVLILLLTKHEVELLFNLQLELRKLCNHDDDAVSGVASWISPL-GKDHLKHRSYFNPV 1176

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            K++IDGD  E +  L  + + KI + +D++P EI K+L +IRN+
Sbjct: 1177 KNIIDGDFVECYLQLLQNWKVKIGEAIDKSPNEIEKRLNDIRNR 1220


>gi|26351753|dbj|BAC39513.1| unnamed protein product [Mus musculus]
          Length = 463

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/466 (49%), Positives = 322/466 (69%), Gaps = 10/466 (2%)

Query: 750  VSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AE 805
            V+++ N LR+  +E+LG  FN+ A PL+YTPR+FV+ P+   ++IIETD  A T    A+
Sbjct: 1    VAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQ 60

Query: 806  EREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVL 865
             ++   +E  EAAG  E      +      +EN    L +  +G PKA + +W S IRV+
Sbjct: 61   RKQQMAEEMVEAAGEDERELA-AEMAAAFLNEN----LPESIFGAPKAGNGQWASVIRVM 115

Query: 866  DPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIY 925
            +P   NT  L++L+ NEAAFS+    F +      + VG AK L   P R++  G+++ Y
Sbjct: 116  NPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILSP-RSVAGGFVYTY 174

Query: 926  RFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPN 985
            + V  G+ LE LHKT VE +P A+  FQGR+L G+G +LR+YDLGKK+LLRKCENK   N
Sbjct: 175  KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIAN 234

Query: 986  TIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD 1045
             I  I T   R+ V D+QESF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGAD
Sbjct: 235  YISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGAD 294

Query: 1046 KFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKAS 1105
            KFGNI  VRLP + +DE++EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +
Sbjct: 295  KFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTT 354

Query: 1106 LVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF 1165
            L+PGG ES++Y T+ G +G ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YF
Sbjct: 355  LIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYF 414

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            PVK+VIDGDLCEQF ++  + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 415  PVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTR 460


>gi|255725990|ref|XP_002547921.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
 gi|240133845|gb|EER33400.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
          Length = 1053

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 349/1115 (31%), Positives = 568/1115 (50%), Gaps = 128/1115 (11%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGT-----------KTPEIVVARGKVLEL--LRPENSG 47
            +YLY+LTL+  +    +I G F  +           K  ++++     L+L  + P+ SG
Sbjct: 8    LYLYNLTLKPGSHYTQSIVGQFYPSINDDNDDDRKKKPQQLILVSSTTLQLYEILPD-SG 66

Query: 48   RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
            +++   S  + G I  + +  +   + D +V+ SDSG I ILEY+  +  F    QE+  
Sbjct: 67   KLQIKTSQNLLGTINKVEKISIE-EKHDSLVITSDSGNISILEYSTKEERFISKGQESMT 125

Query: 108  KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVY 167
            K+G  R   G+YLA+DP+ R +++ A E+ KL+Y +         +SSPLE+     +  
Sbjct: 126  KNGWNRSYVGEYLAIDPENRCILVSAMERNKLIYKIESK-----ELSSPLESTSKGVLTL 180

Query: 168  SICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRK---WS 224
                ++    NP+FAA+E++              + +  L +YELD GLNH+ +K    S
Sbjct: 181  ETVALNTDHGNPLFAALEIN-------------QDKEIVLNYYELDRGLNHIVKKRSSVS 227

Query: 225  EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKN-QGHPDVRAVIPRRADLPAERGVLI 283
            E     AN L+++PG      G++VC +N++ Y+N      +   +PRR         +I
Sbjct: 228  EKPPQDANHLISLPG---PVGGIMVCGKNWMFYENFDSSQRIYLPLPRRK---GNEDSII 281

Query: 284  VSAATH-RQKTLFFFLLQTEYGDIFKVTLEHDN--EHVSELKIKYFDTIPVTASMCVLKS 340
            V+  TH  +K  FF L+Q   GD+FK+ +E+D+  E + ++ I YFDTI    S+ + KS
Sbjct: 282  VNHVTHILKKQKFFVLIQNTLGDLFKLVIEYDSDREIIRDITITYFDTILPCISLNIFKS 341

Query: 341  GYLFAASEFGNHALYQFQAIG---ADPDVEASSSTLMETEEGFQP---VFFQPRGLKNLV 394
            G LFA     N +LYQF+ +G    + D+   SS   + +   +P   + F  + L NL 
Sbjct: 342  GLLFANVLNNNRSLYQFEKLGDELTETDLIIKSSDYDDYKSVIKPTKVITFDLKSLTNLA 401

Query: 395  RIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP 454
             I+ +E+L PI+D +  +       ++ TL      S L+ +  G+  S M  S LP +P
Sbjct: 402  LIDTLETLSPILDAKSID------SKLVTLSS---HSYLKTVTHGIPTSTMVESPLPVIP 452

Query: 455  SAVWTVKKNVNDEFDAYIVV--SFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDD 512
            + ++T K +   E D Y+V+  S ++ TLVLSIGE VE+V DS F+   P++AV  +G +
Sbjct: 453  TDIFTTKLSFESENDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGKN 512

Query: 513  SLMQVHPSGIRHIR----EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD- 567
            S++Q++ +GI+H+R    E  +I +W  P   TI    +N  QV+IALS  E++YFE+D 
Sbjct: 513  SVVQIYTNGIKHVRQINGEKKKITDWLPPAGITITHAATNNQQVLIALSNLEVVYFEIDH 572

Query: 568  MTGQLLEV-EKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILS 626
            +  QL+E  E+ E+S     L I        +S F  +G  D TI+++SL   +C++I S
Sbjct: 573  LDDQLIEYQERLELSSSTTALAIEEHTNNHHQSPFAIIGCSDETIQVVSLKQQNCLEIQS 632

Query: 627  VQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRS 686
            +Q++SS   S+  +++     G+D       L ++ G+ NGV  R  +D + G+LSDSR 
Sbjct: 633  IQALSSNCSSVKMIKL-----GKD-------LMVHIGMNNGVYARIKIDPINGKLSDSRI 680

Query: 687  RFLGLRPPKLFSVVVGGR-AAMLCLSSRPWLGYIHRGRFLLTPL---SYETLEYAASFSS 742
            ++LG +P KL  V +      +L +SS+ W+GY ++  F  TPL   S   ++  +  S 
Sbjct: 681  KYLGSKPVKLNIVKINKEITGVLAVSSKSWIGYYYKHEFKTTPLLDISVSLIDGCSFSSE 740

Query: 743  DQCVEGVVSVAGNALRVFTI-----ERL---GETFNETALPLRYTPRRFVLQPKKKLMVI 794
            D   + +V+++GN L +FT+     E L      F      LRYTPR+            
Sbjct: 741  DIGGDAIVAISGNDLIIFTLGSEEDEGLFDPSRDFTIAKTKLRYTPRKL----------- 789

Query: 795  IETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAE 854
                   LT E+R          A    N  G      NGD +   D    E +GY + +
Sbjct: 790  -------LTYEDR-------LVVAETEYNIKGPYKSSINGDIKETIDEEHYETFGYER-K 834

Query: 855  SDKWVSCIRVLDPRSANTTCL-LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWP 913
               W SC++V      NT    +E + NE+  S   V F DK +   + +G      F P
Sbjct: 835  PKSWSSCLQVFATNDLNTVLQSIEFKSNESIVSSTMVKF-DK-NSPYIIIGITTNQTFLP 892

Query: 914  KRNIVAGYIHIYRF-VEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKK 972
              +   G  +++ F V + K+L+ +HKT++E IP  +  F  +LL     ++RLY+LG+K
Sbjct: 893  NSH---GKSYLFTFKVSKNKTLQFMHKTEIEEIPQVVSNFHNKLLVASKNIIRLYELGQK 949

Query: 973  RLLRKCENKL-FPNTIVSINTYRDRIYVGDIQESFH-FCKYRRDENQLYIFADDSVPRWL 1030
            +LL+K    + F   I+ I    +RI + D   S   F K+   ENQ    ADD + R +
Sbjct: 950  QLLKKSTTVINFLTNIIKIIPQSNRIIISDSHSSSIVFAKFDNLENQFIPIADDIIKRQV 1009

Query: 1031 TAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE 1065
             +   ID DT+  +DKFGN+   R+ +++S +IEE
Sbjct: 1010 ISMFPIDSDTILTSDKFGNLGVSRIDENISRQIEE 1044


>gi|281202530|gb|EFA76732.1| CPSF domain-containing protein [Polysphondylium pallidum PN500]
          Length = 933

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 270/615 (43%), Positives = 380/615 (61%), Gaps = 47/615 (7%)

Query: 389 GLKNLVR--IEQVES----LMPIMDMR----IANLFEEEAPQIFTLCGRGPRSSLRILRP 438
           GL N+VR   E+VES    LM +        + +L  EE PQI+ L G   RS++R+LR 
Sbjct: 215 GLNNVVRKWSEEVESSSNLLMTVPGGSDGPGVMDLVNEEQPQIYALTGVADRSAMRVLRY 274

Query: 439 GLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFL 498
           GL ++++A + LPG+PS +WT+ ++  D  D YIVVSF  +TLVLS+GETVEEV DSG L
Sbjct: 275 GLPIAQIAGTPLPGIPSGLWTIPRSQEDSIDKYIVVSFIGSTLVLSVGETVEEVVDSGIL 334

Query: 499 DTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSG 558
            TT S+ V  IG DS++QV P GIRHI+ D RINEWR PG++TI    SN  QVVIAL G
Sbjct: 335 ATTTSILVRPIGADSIIQVFPHGIRHIKGDRRINEWRAPGRKTISLATSNATQVVIALGG 394

Query: 559 GELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDP 618
           GE+IYFE+D  G L EV K E   +++ L+IA V +GR+ +RF+A+G ++  +R+LSLD 
Sbjct: 395 GEVIYFELDAAGNLSEVAKKEFRREISALEIAPVRKGRQMARFVAIGDWEGPVRVLSLDK 454

Query: 619 DDCMQILSVQSVSSPP-ESLLFLEVQASVGGEDGADHPAS---------------LFLNA 662
           D+ +  +SV        ESL+  E+   V   +G    +S               LFLN 
Sbjct: 455 DNLLNQVSVLDTERMHIESLMMNEMTIGVEMPEGTASSSSAIAKQQQLQNQSNQVLFLNV 514

Query: 663 GLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRG 722
           GL+NGV+ R VVD +TG+LSD+R+R LG +P K   V +    A+L LSSR WL Y+++G
Sbjct: 515 GLKNGVMKRAVVDPITGELSDTRTRLLGRKPVKFSRVKLKSGNAVLALSSRVWLCYVNQG 574

Query: 723 RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRR 782
           R+ + P+S E L+ A+ FSS+ C +G+V+ + N L++F IE+L E FN+  +P + TPRR
Sbjct: 575 RYDMVPVSVEPLDNASGFSSEHCPDGIVATSENNLKIFVIEKLSEKFNQVNVPYKCTPRR 634

Query: 783 FVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN------GDD 836
           FV+ P+   +V IET+   L             E     ENG+  M + ++      GDD
Sbjct: 635 FVVHPQTHYIVSIETEHNYLN------------ELPTPKENGSNKMAEDKDPEVKREGDD 682

Query: 837 -ENKYDPLSDEQYGY-PKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD 894
            + + D  S  Q    PKA   KW+S IRVL+P S  T  L++L  +EAA+S+ T  FHD
Sbjct: 683 MDYEVDQFSLNQNDKPPKAGDGKWLSYIRVLEPVSYRTLDLVKLDQDEAAYSLATCIFHD 742

Query: 895 KEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQG 954
           +E    LAVG  KG+Q  P R + +  IH+YRF   G++L+L++KT+VE +P A+  FQG
Sbjct: 743 REGEVFLAVGCGKGVQLNP-RKVESASIHLYRFTNNGQTLQLVYKTEVEEVPYAISHFQG 801

Query: 955 RLLAGIGPVLRLYDL 969
           RLL GI   LR+Y++
Sbjct: 802 RLLVGIANQLRIYEM 816



 Score =  353 bits (905), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 173/278 (62%), Positives = 219/278 (78%), Gaps = 3/278 (1%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRP-ENSGRIETLVSTEIFG 59
           MYLY+LT+Q+PT I  +I GNFSGTK  EI+V+ G+ LELLRP E +G+I +++ TE+FG
Sbjct: 1   MYLYNLTIQKPTSIYHSIVGNFSGTKQIEILVSHGRSLELLRPDETNGKITSVLYTEVFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRS+A FRLT   KDYI++GS+SGR+VILEYNP+KN F+K+HQETFG++GCRRIVPGQY
Sbjct: 61  LIRSIAPFRLTSGTKDYIIIGSESGRVVILEYNPNKNRFEKVHQETFGRTGCRRIVPGQY 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LA DP+GRA MIGA EKQKLVY+LNRD+AARLTISSPLEAHKSHTI++++CG+D GF+NP
Sbjct: 121 LATDPRGRAFMIGAIEKQKLVYILNRDSAARLTISSPLEAHKSHTILFAMCGVDVGFENP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           IFA + +DYS+ D D      + ++  LTFYELDLGLN+V RKWSE V++ +N+L+TVPG
Sbjct: 181 IFATLSVDYSD-DTDLEEMEDNHSKMMLTFYELDLGLNNVVRKWSEEVESSSNLLMTVPG 239

Query: 240 GGDGPSGV-LVCAENFVIYKNQGHPDVRAVIPRRADLP 276
           G DGP  + LV  E   IY   G  D  A+   R  LP
Sbjct: 240 GSDGPGVMDLVNEEQPQIYALTGVADRSAMRVLRYGLP 277



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/150 (52%), Positives = 106/150 (70%), Gaps = 9/150 (6%)

Query: 1062 EIEEDPTGGKIKWEQGKL-NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            E+EE P    I   QG+L  G  N      Q  + ++V  + K SL  GG E ++Y T+ 
Sbjct: 788  EVEEVPYA--ISHFQGRLLVGIAN------QLRIYEMVNHISKTSLSVGGPEVLVYATLN 839

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G++GA++ F SR+DVDF++ LE+ MRQE+PPLCGRDH+AYRS YFPVK+VIDGDLCEQ+ 
Sbjct: 840  GTIGALVPFVSREDVDFYTSLELQMRQENPPLCGRDHLAYRSYYFPVKNVIDGDLCEQYI 899

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            +L    Q+ IA+EL R+P EILKKLE++R+
Sbjct: 900  SLDPTKQQSIAEELSRSPSEILKKLEDLRS 929


>gi|285999|dbj|BAA02805.1| KIAA0017 [Homo sapiens]
          Length = 399

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 196/369 (53%), Positives = 268/369 (72%), Gaps = 1/369 (0%)

Query: 843  LSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLA 902
            L +  +G PKA + +W S IRV++P   NT  L++L+ NEAAFS+    F +      + 
Sbjct: 29   LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVL 88

Query: 903  VGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGP 962
            VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE +P A+  FQGR+L G+G 
Sbjct: 89   VGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGK 147

Query: 963  VLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFA 1022
            +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QESF + +Y+R+ENQL IFA
Sbjct: 148  LLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFA 207

Query: 1023 DDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA 1082
            DD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W++G LNGA
Sbjct: 208  DDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGA 267

Query: 1083 PNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE 1142
              K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +D DFF H+E
Sbjct: 268  SQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVE 327

Query: 1143 MHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEIL 1202
            MH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++ELDRTP E+ 
Sbjct: 328  MHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVS 387

Query: 1203 KKLEEIRNK 1211
            KKLE+IR +
Sbjct: 388  KKLEDIRTR 396


>gi|12653387|gb|AAH00463.1| SF3B3 protein [Homo sapiens]
 gi|13111947|gb|AAH03146.1| SF3B3 protein [Homo sapiens]
          Length = 399

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 196/369 (53%), Positives = 268/369 (72%), Gaps = 1/369 (0%)

Query: 843  LSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLA 902
            L +  +G PKA + +W S IRV++P   NT  L++L+ NEAAFS+    F +      + 
Sbjct: 29   LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNIGEDWYVL 88

Query: 903  VGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGP 962
            VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE +P A+  FQGR+L G+G 
Sbjct: 89   VGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGK 147

Query: 963  VLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFA 1022
            +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QESF + +Y+R+ENQL IFA
Sbjct: 148  LLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFA 207

Query: 1023 DDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA 1082
            DD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W++G LNGA
Sbjct: 208  DDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGA 267

Query: 1083 PNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE 1142
              K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +D DFF H+E
Sbjct: 268  SQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVE 327

Query: 1143 MHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEIL 1202
            MH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++ELDRTP E+ 
Sbjct: 328  MHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVS 387

Query: 1203 KKLEEIRNK 1211
            KKLE+IR +
Sbjct: 388  KKLEDIRTR 396


>gi|154419018|ref|XP_001582526.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
 gi|121916762|gb|EAY21540.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
          Length = 1142

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 334/1242 (26%), Positives = 569/1242 (45%), Gaps = 135/1242 (10%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTP---EIVVARGKVLELLRPENSGR--IETLVSTEI 57
            LY   +Q P  +     G F+GT  P   EI V+ G  + +       +  ++ +V+  +
Sbjct: 4    LYHSVIQPPQHVKCCTVGKFTGTSNPDYDEIAVSLGTYISIYAQIQMEQDIMKQIVNEPM 63

Query: 58   FGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPG 117
            +  I +LA   L  S+KDY+VV SD+  IVI + +  K  F+ I    +G++G RR+ PG
Sbjct: 64   YSHIYNLATLSLPKSEKDYLVVMSDAANIVIFDLHGCK--FNAIVSLPYGRTGLRRMEPG 121

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
             YLAV P GRA++  A EK KL + + ++     T+S+PLE  ++ T VYS   +D G++
Sbjct: 122  YYLAVSPCGRAILASAIEKFKLAWTVTKNNENLPTVSAPLENSRNKTFVYSTVALDVGYE 181

Query: 178  NPIFAAIELDYSEA-DQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE----PVDNGAN 232
             P FA IE+ + +  D+           K LTFY+LD  +N + R   +    P+   ++
Sbjct: 182  VPKFACIEVHFKQPQDEPERTFNPKTEPKYLTFYQLDTNINFLVRCGKKDDEIPLPPTSS 241

Query: 233  MLVTVPGG-GDGPSGVLVCAENFVIY-KNQGHPDVRAVIPRRADLPAERGVLIVSAATHR 290
            +LV+VPG   D P GVLVC+   + Y  N G       +P+R +   E   +I+++A   
Sbjct: 242  LLVSVPGPLFDYPGGVLVCSTGHLQYFDNNGQLKDECDLPQREN---EENSIIITSAVFC 298

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
                +  LLQ ++GD+    ++       +++I+YFDT+ +  S+ +   G L    E  
Sbjct: 299  SSNGWLILLQNQFGDLLFTKIQKQ----CKIQIQYFDTVQIATSLTITNQGTLCVFGEEY 354

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI 410
            +++ Y       D +      T     E  +  +F+   +KN     ++  L+     R 
Sbjct: 355  SNSFYYITESCEDVEEGFVEKTFSPNTENTKIEYFEGHEIKN-----RLTKLITAPSFRG 409

Query: 411  ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA 470
            + L +     I ++ G   +SSL+I R G+    +   ++ G  + V  VKK+  +E+D 
Sbjct: 410  SQLGD-----IISIHGSFNKSSLKITRKGMPTKVLKPIEIGGGCTFVKAVKKDPLNEYDT 464

Query: 471  YIVVSFNNATLVLSIGETVEEVSDSG---FLDTTPSLAVSLI----GDDSLMQVHPSGIR 523
            +I VS  + T +    E   E+ DS    F+    ++ V  +       SL Q+   G+R
Sbjct: 465  FIFVSNESTTRIFEFFEETRELKDSKESLFVTDKKTIDVFFLPAFNNTSSLAQITTEGMR 524

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH---EM 580
             I  D   ++W+      I+ V +N  Q+ I     +++ FE D T    EV  +   E+
Sbjct: 525  IIN-DKEKHDWKRDESSKIICVTANPSQIAIVYDDNQIVLFETDETSLPKEVSSNKVMEI 583

Query: 581  SGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSL----DPDDCMQILSVQSVSSPPES 636
            +G +  + +     G +   +LAV + ++ + I+ +       +   + S Q +     S
Sbjct: 584  AGQITSIALPQPQTGVRYVEWLAVSAVNDGLSIVYIVNISKTTEMWSVSSRQILDKTVIS 643

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            ++FL V   +G            L+ G   G+L RT +D   G L ++  +FLG  P   
Sbjct: 644  MMFLFVPG-IGN----------ILHIGHNEGLLTRTNLDDSNGSLDNATLKFLGNAPVTF 692

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLS---YETLEYAASFSSDQCVEGVVSVA 753
                V  + ++L   + PW     +G  L+   S       +Y A F  D   +  + + 
Sbjct: 693  SRCEVKNQNSILINCASPWYT---KGLSLVQLSSSPFVSCCQYKAPFFID---DSFIGLT 746

Query: 754  GNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKE 813
             N + +F         +   L L  TPR+ V  P  K + ++ +D   +  + +  AK  
Sbjct: 747  TNNMVLFYTPDKNILIDTQTLDLDMTPRQIVHIPNTKFVCVLMSD--LIKGKWKSQAK-- 802

Query: 814  CFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT 873
                             + N D+    +PL                              
Sbjct: 803  -----------------LVNYDELISSEPL------------------------------ 815

Query: 874  CLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKS 933
               +L DN    + C +     E+  L+AV  AK L F+PKR    G + +   ++ G  
Sbjct: 816  ---QLDDNLLVSAACYL-----ENYNLVAVCVAKNLSFFPKR-CDGGQVLL---LDIGSG 863

Query: 934  L-ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINT 992
            + +++  T  + IP A+  F   ++ G+   L +  +G+ +LL+KC +K FP+ I  +  
Sbjct: 864  IPKVVQSTDFDDIPQAIAPFGEYVILGVQETLMVLKVGRTKLLKKCCSKAFPHCINYLKA 923

Query: 993  YRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
            +  RI  GD  ESFHF K+ ++E+ L IFADD VPR   +A  +D  T+   DKFG+   
Sbjct: 924  FGTRIIAGDAMESFHFVKFDKEEDILSIFADDMVPRHPLSAIGLDRSTVCCGDKFGSFCI 983

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
            +RLP D++D+ E DP+     +E  K  GA NK+E    +H+G  +T L    L  G  E
Sbjct: 984  LRLPPDINDDAEIDPSDVGHAFENEKFPGAKNKVELSNMYHIGSPITGL---CLSQGDFE 1040

Query: 1113 --SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDV 1170
              S++YGTV G +G  +   +  D   F  LE  M++      GR    +RS Y P+K V
Sbjct: 1041 NTSIVYGTVDGEIGLFIPLKTDTDARLFRLLEDEMKKLIKSPVGRFIEQFRSYYTPLKCV 1100

Query: 1171 IDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             D +L   +  L  +LQ++IA++L   P ++ + L ++ + I
Sbjct: 1101 NDSNLLLSYIDLPTNLQKEIAEKLKVKPFDLSRLLAKVDSSI 1142


>gi|14602539|gb|AAH09780.1| SF3B3 protein [Homo sapiens]
 gi|325464197|gb|ADZ15869.1| splicing factor 3b, subunit 3, 130kDa [synthetic construct]
          Length = 275

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/255 (72%), Positives = 218/255 (85%), Gaps = 1/255 (0%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1   MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61  VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121 LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181 MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240 GGDGPSGVLVCAENF 254
           G DGPSGVL  +  F
Sbjct: 241 GSDGPSGVLNLSPPF 255


>gi|302654423|ref|XP_003019019.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
 gi|291182709|gb|EFE38374.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
          Length = 460

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/449 (44%), Positives = 274/449 (61%), Gaps = 22/449 (4%)

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
            R+F+IE+L     +  +PL YTPR FV  P+  L  +I +D   L+   +         A
Sbjct: 5    RIFSIEKLDNNLLQEPIPLAYTPRNFVRHPEYPLFYVIGSDNNILSPATK---------A 55

Query: 818  AGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLL 876
              + E+   N D  E          L  E +GYP+  ++ W S I+V+DP  + +    L
Sbjct: 56   KLLSESTTVNGDSAE----------LPPEDFGYPRG-TNHWASSIQVVDPIHTKSVLSNL 104

Query: 877  ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLEL 936
            EL+DNEAA SI  V+F  +E  T L VGT K +   P R    G+IHIYRF EEGK LE 
Sbjct: 105  ELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSP-RTFTCGFIHIYRFQEEGKELEF 163

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDR 996
            +HKT+VE  PLAL  FQGRLLAGIGP LR+YDLG ++LLRKC+ ++ P  IV + T   R
Sbjct: 164  IHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGLQTQGSR 223

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I V D+QES  +  Y+  EN L  FADD +PRW T    +D++T+AG DKFGNI+ +R P
Sbjct: 224  IIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFGNIWLLRCP 283

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIY 1116
               S+E +ED +G  +  E+  L GAPN++  ++ F+  D+ TS+QK  LV GG + +++
Sbjct: 284  TKASEEADEDGSGAHLIHERQYLQGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVW 343

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLC 1176
              + G++G  + F +RDDVDFF  LEM +  ++PPL GRDH+ YR  Y P K VIDGDLC
Sbjct: 344  TGLQGTVGMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLIYRGYYAPCKGVIDGDLC 403

Query: 1177 EQFPTLSLDLQRKIADELDRTPGEILKKL 1205
            E F  L  D ++ IA ELDR+  EI +K+
Sbjct: 404  ETFLLLPNDKKQAIAGELDRSVREIERKI 432


>gi|302504585|ref|XP_003014251.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
 gi|291177819|gb|EFE33611.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
          Length = 460

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/449 (44%), Positives = 274/449 (61%), Gaps = 22/449 (4%)

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
            R+F+IE+L     +  +PL YTPR FV  P+  L  +I +D   L+   +         A
Sbjct: 5    RIFSIEKLDNNLLQEPIPLAYTPRNFVRHPEYPLFYVIGSDNNILSPATK---------A 55

Query: 818  AGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP-RSANTTCLL 876
              + E+   N D  E          L  E +GYP+  ++ W S I+V+DP  + +    L
Sbjct: 56   KLLSESTTVNGDSAE----------LPPEDFGYPRG-TNHWASSIQVVDPIHTKSVLSNL 104

Query: 877  ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLEL 936
            EL+DNEAA SI  V+F  +E  T L VGT K +   P R    G+IHIYRF EEGK LE 
Sbjct: 105  ELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSP-RTFTCGFIHIYRFQEEGKELEF 163

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDR 996
            +HKT+VE  PLAL  FQGRLLAGIGP LR+YDLG ++LLRKC+ ++ P  IV + T   R
Sbjct: 164  IHKTKVEQPPLALLGFQGRLLAGIGPDLRIYDLGMRQLLRKCQAQITPRVIVGLQTQGSR 223

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I V D+QES  +  Y+  EN L  FADD +PRW T    +D++T+AG DKFGNI+ +R P
Sbjct: 224  IIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGDKFGNIWLLRCP 283

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIY 1116
               S+E +ED +G  +  E+  L GAPN++  ++ F+  D+ TS+QK  LV GG + +++
Sbjct: 284  TKASEEADEDGSGAHLIHERQYLQGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVW 343

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLC 1176
              + G++G  + F +RDDVDFF  LEM +  ++PPL GRDH+ YR  Y P K VIDGDLC
Sbjct: 344  TGLQGTVGMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLIYRGYYAPCKGVIDGDLC 403

Query: 1177 EQFPTLSLDLQRKIADELDRTPGEILKKL 1205
            E F  L  D ++ IA ELDR+  EI +K+
Sbjct: 404  ETFLLLPNDKKQAIAGELDRSVREIERKI 432


>gi|119572188|gb|EAW51803.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_a [Homo sapiens]
          Length = 265

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/246 (73%), Positives = 213/246 (86%), Gaps = 1/246 (0%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1   MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRSL  FRLTG  KDYIVVGSDSGRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+
Sbjct: 61  VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRAVMI A EKQKLVY+LNRD AARLTISSPLEAHK++T+VY + G+D GF+NP
Sbjct: 121 LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
           +FA +E+DY EAD D TG+AA+  Q+ LTFYELDLGLNHV RK+SEP++   N L+TVPG
Sbjct: 181 MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 240 GGDGPS 245
           G DGPS
Sbjct: 241 GSDGPS 246


>gi|50549733|ref|XP_502337.1| YALI0D02717p [Yarrowia lipolytica]
 gi|74634908|sp|Q6CAH5.1|RSE1_YARLI RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|49648205|emb|CAG80525.1| YALI0D02717p [Yarrowia lipolytica CLIB122]
          Length = 1143

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 283/850 (33%), Positives = 423/850 (49%), Gaps = 108/850 (12%)

Query: 3   LYSLTLQQPTGIIAAINGNFSGTKTPEIVVAR-GKVLELLRPENSGRIETLVSTEIFGA- 60
           LY  TL+  +   +AI G FSG     I ++  G  L L   +      TL+ T +    
Sbjct: 24  LYHSTLRS-SSPKSAICGRFSGKSQQVITLSSTGNALYLYSHDGDTGTVTLIHTHLTHCQ 82

Query: 61  IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
           +R +  FRL G +KDY++  SDSG I +LE+    N F  +H+E +G+SG RR+VPG++L
Sbjct: 83  VREIRAFRLPGLKKDYVIASSDSGVISVLEFR--HNRFVSLHKEAYGRSGIRRVVPGEFL 140

Query: 121 AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
           AVDPKGRA M+ + EK KLVYVLNR   A + ISSPLEAH S  + Y +   D  ++NP+
Sbjct: 141 AVDPKGRACMLASVEKSKLVYVLNRQ-GADIVISSPLEAHTS-CVTYFVVACDVAYENPV 198

Query: 181 FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
           FAAIE    E          +   K L FYELDLGLNHV RK    + N  + +  VPGG
Sbjct: 199 FAAIETPVGE----------TSPGKQLVFYELDLGLNHVIRKAPVDIPNSTSHVTAVPGG 248

Query: 241 GDGPSGVLVCAENFVIYK---------NQGHPDVRAVIPRRADLPAERGVLIVSAATHRQ 291
            DGP GVLV + N +++                 +  +P+ A   A    +IV++A H+ 
Sbjct: 249 TDGPGGVLVFSTNAIVHHVAGAAGGASTGAAGSTKIALPKPA---AGYDNVIVASALHQS 305

Query: 292 KTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIP-VTASMCVLKSGYLFAASEFG 350
           + LFF++ Q   GD+FK++ + + +H S L   YF T+  V  S+ +LKS ++   SE G
Sbjct: 306 RDLFFYIAQNTRGDLFKISRDSETQHWSVL---YFGTMSCVCTSLTILKSAHMVCLSEQG 362

Query: 351 NHALYQFQAIGADP------DVEASSSTLMETEEGFQ--PVFFQPRGLKNLVRIEQVESL 402
           +  +  F+++G D       DV + S  L  T+  F+  PVF    G    V     + +
Sbjct: 363 DSHMMFFESLGDDDAPENVYDVISPSPYLTVTQTLFELKPVFDSVVG----VNTTSSDHV 418

Query: 403 MPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
            P+             P + +L     R  L+++   L  S +  S LP  PS +WT++ 
Sbjct: 419 GPV-------------PNVLSLI-SATRGGLKLISHALKPSIIVASPLPEPPSKLWTMRD 464

Query: 463 NVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
                 D YIV+S+ NATLVL IG++V E + SG     P+L    +G  S +QV   G+
Sbjct: 465 GAGS--DKYIVLSYANATLVLEIGDSVVETTSSGLTLDKPTLHCGSVG-SSYVQVMTDGM 521

Query: 523 RHI-------REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV 575
             I        E     +W  P  + I    S+  QVV+ L+   L YFE D  G  L  
Sbjct: 522 NVIPMSREGSSESLPATKWTAPSGQVICASSSSH-QVVLGLT-SSLFYFE-DTPGSELSA 578

Query: 576 E--KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP 633
               +E+S     + +A VP GR RS F+AV + D T+RI+S+DP+   + ++VQ + + 
Sbjct: 579 YDGAYELSSPPTAVAVAPVPAGRVRSPFVAVATDDETVRIVSVDPESMFETVAVQGLMAT 638

Query: 634 PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
             SL  L V               L+L+ GL NGV  R  +D +TG++  S S+F+GL  
Sbjct: 639 ASSLALLSVG------------QVLYLHMGLANGVYVRVELDPLTGEIVGSWSKFVGLGR 686

Query: 694 PKLFSVVVGGRAAMLCLSS--RPWLGYIHRGR-------------FLLTPLSYETLEYAA 738
             +  V  GG  ++L  S   +  LG+++                F L  +S E L+ A 
Sbjct: 687 LSVVPVTCGGEESILVSSRGVKTCLGHVNATSDTWVPTGGNSAPFFALDAISGEPLDLAH 746

Query: 739 SFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMV----- 793
           SF +  C  GV+ VAG+ L++FT+    + + E  + L  T +R +      L +     
Sbjct: 747 SFHTQDCPHGVIGVAGSTLKIFTVNT-AQKWTENEVKLEGTAKRLIQHDATTLTITQNPD 805

Query: 794 -IIETDQGAL 802
            ++  D GA+
Sbjct: 806 RLVSVDNGAV 815



 Score =  140 bits (352), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 158/315 (50%), Gaps = 34/315 (10%)

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            SIC V F D +     AVG ++     P  +  +GYI I+       SL  +H T+VE  
Sbjct: 827  SICEVMFGDGKR--YFAVGGSR--DGSPGTSGTSGYISIF----SSSSLGHVHTTEVEAP 878

Query: 946  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPN-TIVSINTYRDRIYVGDIQE 1004
            PLALC + G L+AGIG  +RLY LG K++LRK + +L    T ++     +R+ VGDI++
Sbjct: 879  PLALCAYNGLLVAGIGSQVRLYALGLKQVLRKAQIELSKRVTCLAHFAGSNRVAVGDIRQ 938

Query: 1005 SFHFCKYRRDENQ--LYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
            S   C    +++   +Y    D + R +T    +D++T+A  D+FG    +R+P + S  
Sbjct: 939  SVTVCVVLEEDSGHVIYPLVCDKISRQVTCLFFVDYETVALGDRFGGFTMLRIPSEASKL 998

Query: 1063 IEEDPTGGKIKWEQGKLNGAPN-KMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMG 1121
             +ED     ++  +  LNG  + + + +  FH+ DV  ++   +          Y  V G
Sbjct: 999  ADEDHNAVHLRQLEPTLNGPAHFRFDHVASFHIEDVPVAIHMYN---------DYLVVCG 1049

Query: 1122 SLGAMLAF-------SSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGD 1174
             LG + AF        SRD       +E  +    P L GRDH  +R  Y PVK+V+DGD
Sbjct: 1050 LLGTVSAFVPVVSPKQSRD----LKTIEKFVCASDPGLMGRDHGRFRGYYVPVKEVVDGD 1105

Query: 1175 LCEQFPTLSLDLQRK 1189
            +  +   L +D +R+
Sbjct: 1106 MLRE--VLVMDEKRR 1118


>gi|116191283|ref|XP_001221454.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
 gi|88181272|gb|EAQ88740.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
          Length = 979

 Score =  372 bits (954), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 211/471 (44%), Positives = 282/471 (59%), Gaps = 47/471 (9%)

Query: 295 FFFLLQTEYGDIFKVTL--EHDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
           FFFLLQTE GD+FK TL  + D E      V+ +K++YFDT+PV +S+C+LKSG+L  AS
Sbjct: 83  FFFLLQTEDGDLFKATLGMQEDGEGNLTGEVNCIKLRYFDTVPVASSLCILKSGFLLVAS 142

Query: 348 EFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
           EF NH LYQF+ +G D  VE +S+          PVFF P+   NL  +E +ES+ PI+ 
Sbjct: 143 EFENHHLYQFEQLGDD-QVEFNSN------RDIAPVFFDPQPSGNLSLVETIESMNPILA 195

Query: 408 MRIANLFE-EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
             + NL E ++APQI++ CG G RS  RILR GL V+E+  S+LPG  SAVWT K    D
Sbjct: 196 SGVVNLREGDDAPQIYSACGSGTRSHFRILRHGLEVNEIVASELPGTVSAVWTTKLTSQD 255

Query: 467 EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
           + D YI+++ +  TLVLSIGE V++VSDSGFL +  +LA+  IGDDSL QVHP GIRHIR
Sbjct: 256 KHDTYIILTSSTDTLVLSIGEEVKQVSDSGFLTSVSTLAIQQIGDDSLAQVHPKGIRHIR 315

Query: 527 EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV-DMTGQLLEVE-KHEMSGDV 584
              +I EW  P  RTIV   +N+ QV +ALS GE+IYFE+ D  G L E + + EMSG V
Sbjct: 316 SSDQIIEWPAPQHRTIVATATNQRQVAVALSSGEIIYFELDDADGSLAEYDGREEMSGTV 375

Query: 585 ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
            CL +  VPEGR RS FLAVG  D TIRILSLDP+  ++  SVQ++++ P +L  + +  
Sbjct: 376 TCLSLGQVPEGRLRSSFLAVGCDDRTIRILSLDPESTLESRSVQALTAAPSALAIIPMDD 435

Query: 645 SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
           S+ G   +                             SD+  +FLG+RP +LF V V  +
Sbjct: 436 SLLGGSNS-----------------------------SDTNYKFLGVRPVRLFPVTVKQK 466

Query: 705 AAMLCLSSRPWLGYIHRGR-FLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             +L LSS+ WLG++   R FL   +  E    A    +     G  +  G
Sbjct: 467 PRVLALSSKAWLGHVDLARGFLFYTIESENNTLAPELRAQLVAAGTTAPGG 517



 Score =  313 bits (801), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 166/421 (39%), Positives = 241/421 (57%), Gaps = 17/421 (4%)

Query: 791  LMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGY 850
            L   IE++   L  E R         AAG    G    D +         + L  EQ+GY
Sbjct: 488  LFYTIESENNTLAPELRAQ-----LVAAGTTAPGGEKPDHVA--------EILPPEQFGY 534

Query: 851  PKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQ 910
            P+ +  +W SCI ++DP        + LQ+NEAA S+   +F  ++  + L V T + + 
Sbjct: 535  PRGQG-RWASCISIVDPIGETVIRTIHLQENEAAASLAIASFTSQDDESFLVVSTGRDMV 593

Query: 911  FWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLG 970
              P R +  GY ++YRF ++G+ LEL+HKT     P AL  F+GRL+AGIG  L +YDLG
Sbjct: 594  LNP-RQLSGGYSYVYRFHDDGRDLELIHKTGTTEPPTALEAFRGRLVAGIGKTLVVYDLG 652

Query: 971  KKRLLRKCE-NKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRW 1029
             K++LRK + N + P  IVS+ T  +RI VGD+Q       YR + NQL  F DD++ RW
Sbjct: 653  LKQMLRKTQANDVVPGLIVSLQTQGNRIVVGDVQHGVAMVAYRTESNQLIPFVDDTIARW 712

Query: 1030 LTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEI 1089
             T    +D+D++AG DKFGN + VR PQ  S E +E P   ++   +  L+GAP++++  
Sbjct: 713  TTCTTMVDYDSVAGGDKFGNFWIVRTPQQASLEADE-PGAHRLLHAREHLHGAPHRLQLT 771

Query: 1090 VQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEH 1149
              FH  D+ T + K  LV GG E +++    G++G  + F +R+D DFF  LE HMR E 
Sbjct: 772  AHFHTQDIPTGITKTHLVVGGQEVLVWSGFQGTVGVFVPFVTREDADFFLALEQHMRGEE 831

Query: 1150 PPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            P L GRDH+AYR  Y P K V+DGDLCE++  L  D +++IA ELDR+  E+ +K+ +  
Sbjct: 832  PSLIGRDHLAYRGYYEPAKGVVDGDLCERYQLLPGDKKQRIAAELDRSVREVERKISKGP 891

Query: 1210 N 1210
            N
Sbjct: 892  N 892



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)

Query: 1  MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS-GRIETLVSTEIFG 59
          M LYSLT+Q PT    AI G FSGTK  +I+ A G  + LLR + + GR+  L++ ++FG
Sbjct: 7  MILYSLTIQPPTATTQAIIGLFSGTKEQQILTASGSRITLLRQDATLGRLSPLITQDLFG 66

Query: 60 AIRSLAQFRLTGSQKDYIVV 79
           IRS+A FRL GS K +  +
Sbjct: 67 TIRSIAAFRLAGSAKAFFFL 86


>gi|344231825|gb|EGV63707.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
 gi|344231826|gb|EGV63708.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
          Length = 991

 Score =  361 bits (927), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 246/771 (31%), Positives = 402/771 (52%), Gaps = 113/771 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
           MYLY+ T +  T  +++I G F  TK  ++V+A    LE    ++  +IE + S   FG 
Sbjct: 1   MYLYNFTSKASTSSVSSIIGQF--TKKQQLVIATANTLETWIQQDE-KIEKVRSQFSFGI 57

Query: 61  IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
           I+ L + R  G  +D +V+ SDSG + + E+   +  F  +  E   K+G R I PG+YL
Sbjct: 58  IQKLEKLRPLGFDRDLLVITSDSGNLTVCEFKHEE--FVPLFHEPHSKNGLRSITPGEYL 115

Query: 121 AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
            +DP  RA+MI A E+ KL+Y ++ +   R+++SSPLE   ++T     C +D GF+NP+
Sbjct: 116 DIDPHNRAIMISAVERNKLLYRVHVEN-ERVSLSSPLECLSNNTFTLCTCAVDNGFNNPL 174

Query: 181 FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
           FAAIE+D             S  +  L +YELD GLNHV ++ +E V   AN+L+     
Sbjct: 175 FAAIEID-------------SNKKTVLNYYELDQGLNHVMKR-TEDVPESANLLIPF--- 217

Query: 241 GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
                G++VC + F++     H       P+++         IV+   H+ K  FF LLQ
Sbjct: 218 ----DGLMVCCDGFIL-----HNGKELAFPKKSK--------IVNYVIHKLKNDFFVLLQ 260

Query: 301 TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
            E+GD+FKV  +         +I YF  +PV+ ++ + K+G+L+A     N    Q   +
Sbjct: 261 NEFGDLFKVDTD---------QINYFGHLPVSVAINIFKNGHLYANCSNTNKLYCQITGL 311

Query: 361 GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
                 + S ST                 L+NL  ++ +ESL PI+D+++ +        
Sbjct: 312 ------KVSRST--------------SDNLENLELVQTIESLDPILDIKLKD------SH 345

Query: 421 IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
           + T       +S++ L  G+  + +  S LP  P  ++T K   +D  DAY+V+S ++ T
Sbjct: 346 LIT----ANSTSVKTLVHGVPTTTIVESPLPSSPLKIFTTKLTRDDVNDAYLVIS-SSET 400

Query: 481 LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR 540
            VLSIGE V EV+DS F    P++ V  +G  +L+QV+ +GI+HI  + ++ +W  P   
Sbjct: 401 SVLSIGEEVAEVTDSKF-SKDPTILVQQVGKMALIQVYSNGIKHINGE-KVTDWFPPAGI 458

Query: 541 TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSGDVACLDIASVPEGRKRS 599
            I+K  SN  Q++I L+  E+IYFEVD+  QL+E + K E+  ++  L I+         
Sbjct: 459 NIIKASSNNQQLIIGLTNNEVIYFEVDVDDQLVEYQDKVELPTNITALAIS--------K 510

Query: 600 RFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
            F   G  D T++++SL   +C++ILS+Q +SS   ++ F E +  +             
Sbjct: 511 DFAVAGCADETVQVISLKQQNCLEILSMQMLSSNSSAIEFSEQEVHI------------- 557

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYI 719
              G++NG+  RT +D   G+LS++R ++LG +P +L  +      ++L +SS+PW+G+ 
Sbjct: 558 ---GMENGLFVRTNID-ARGKLSNTRVKYLGTKPIRLSKI----NDSILAISSKPWVGFK 609

Query: 720 HRGRFLLTPLSYETLEYAASF-SSDQCVEGVVSVAGNALRVFTIERLGETF 769
             G F + PL+   +    SF S D   EG+V   GN L +FTI+     F
Sbjct: 610 TNGNFNIVPLNDIDITDGTSFYSEDIGGEGIVGFRGNDLIIFTIDDFRNNF 660



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/289 (36%), Positives = 166/289 (57%), Gaps = 20/289 (6%)

Query: 926  RFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL-FP 984
             F+   K ++L+HKT+VE  P ++ +F GRLL G+  +LR YDLGKK+LLRK    +   
Sbjct: 717  NFLYTFKDMKLVHKTEVEMPPRSILEFNGRLLVGMDNLLRTYDLGKKQLLRKSSTAIKHI 776

Query: 985  NTIVSINTY--RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMA 1042
            N I+ I  Y  +DRI VGD   S  FCK+   EN     +DD++ R +T+   +D+DT+ 
Sbjct: 777  NKIIRI-VYQGKDRIVVGDSNNSTIFCKFI--ENSFVPISDDTMNRQITSLSTLDYDTVI 833

Query: 1043 GADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQ 1102
            G DKFGN++  R+  D +  +EE             LNG+  + + + +F + D+  S  
Sbjct: 834  GGDKFGNVFVNRIKYDNTYFVEE-----------SYLNGSSGRCQTLAEFFLNDIPMSFT 882

Query: 1103 KASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
            K +LV GG E +IY  + G++G +L   S  D  F S+L + + ++   L GRDHM +R 
Sbjct: 883  KGTLVLGGPEVIIYAGLQGTIGILLPI-SESDFKFLSNLSIELNKD--LLLGRDHMKFRG 939

Query: 1163 AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             Y    +VIDGD+ E+F  L+   + KI+++L+++  EI  K+ + R K
Sbjct: 940  YYNSTHNVIDGDIIEKFLELNASSRIKISNKLNKSVREIENKINDYREK 988


>gi|85682925|gb|ABC73438.1| CG13900 [Drosophila miranda]
          Length = 341

 Score =  349 bits (896), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 170/321 (52%), Positives = 220/321 (68%), Gaps = 2/321 (0%)

Query: 843  LSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTL-L 901
            L ++ +  PKA    W S IR LD     T   + L  NEA  S+  V F     G   L
Sbjct: 22   LPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFSMSLAQNEAIMSMAMVKFSVAADGRYYL 81

Query: 902  AVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIG 961
            AVG A+ LQ  P R    GY+ IY+      SLE +H+T+++ IP ALC FQGRLLAG G
Sbjct: 82   AVGIARDLQLNP-RISQGGYLDIYKIDPTCSSLEFMHRTEIDEIPGALCGFQGRLLAGCG 140

Query: 962  PVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIF 1021
             +LR+YDLGKK++LRKCENK  P  IV+I     R+YV D+QES  F +YRR ENQL IF
Sbjct: 141  RMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFFLRYRRAENQLIIF 200

Query: 1022 ADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNG 1081
            ADD+ PRW+TA   +D+DT+A ADKFGN+   RLP  V+D+++EDPTG K  W++G L+G
Sbjct: 201  ADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSG 260

Query: 1082 APNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHL 1141
            A  K E I  FHVG+++ SLQKA+L+PGG E++IY T+ G++GA + F+SR+D DFF HL
Sbjct: 261  ASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYSTLNGTVGAFVPFTSREDYDFFQHL 320

Query: 1142 EMHMRQEHPPLCGRDHMAYRS 1162
            EMHMR E+PPLCGRDH++YRS
Sbjct: 321  EMHMRNENPPLCGRDHLSYRS 341


>gi|389609725|dbj|BAM18474.1| spliceosomal protein sap [Papilio xuthus]
          Length = 367

 Score =  347 bits (889), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 166/338 (49%), Positives = 231/338 (68%), Gaps = 7/338 (2%)

Query: 841  DPLSDEQYGYPKAESDKWVSCIRVLDPRSAN----TTCLLELQDNEAAFSICTVNFHDKE 896
            D L +  +  PKA +  W S IRV+D   +     T   L L+ NEAA S+C V++  + 
Sbjct: 30   DVLPENVFSSPKAGAGMWASQIRVIDMGVSGGQPGTVYKLPLEQNEAAVSMCIVHWTAQA 89

Query: 897  HGTL--LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQG 954
               +  L VG AK +   P R+   G +H+Y+       LEL+HKT ++  P AL  F G
Sbjct: 90   FLGIPHLVVGVAKDMILSP-RSCTEGSLHVYKIFSNTGKLELVHKTPIDDYPGALAAFNG 148

Query: 955  RLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRD 1014
            +L+AG+G +LR+YD+G+++LLRKCEN+  PN I  I T   RI+V D+QES    KY++ 
Sbjct: 149  KLMAGVGRMLRMYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFVADVQESVFCVKYKKR 208

Query: 1015 ENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKW 1074
            ENQL IFADD+ PRW+T    +D+DT+A +DKFGN+  +RLP  VSD+++EDPTG K  W
Sbjct: 209  ENQLIIFADDTNPRWITNTCVLDYDTVAMSDKFGNVSVMRLPHSVSDDVDEDPTGNKALW 268

Query: 1075 EQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDD 1134
            ++G LNGA  K E +V FHVG+ V SLQ+A+L+PGG E+++Y T+ G+LG +L F+SR+D
Sbjct: 269  DRGLLNGASQKGEIVVNFHVGETVASLQRATLIPGGSEALLYATISGALGVLLPFTSRED 328

Query: 1135 VDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
             DFF HLEMHMR E+ PLCGRDH+++RS Y+PVK+VID
Sbjct: 329  HDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVID 366


>gi|226508594|ref|NP_001140370.1| uncharacterized protein LOC100272422 [Zea mays]
 gi|194699204|gb|ACF83686.1| unknown [Zea mays]
          Length = 173

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 154/173 (89%), Positives = 168/173 (97%)

Query: 1041 MAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTS 1100
            MAGADKFGNIYF RLPQD+SDEIEEDPTGGKIKWEQGKLNGAPNK+EEIVQFHVGDVVT 
Sbjct: 1    MAGADKFGNIYFARLPQDISDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTC 60

Query: 1101 LQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY 1160
            LQKASL+PGGGE +IYGTVMGS+GA+LAF+SR+DVDFFSHLEMH+RQEHPPLCGRDHMAY
Sbjct: 61   LQKASLIPGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAY 120

Query: 1161 RSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            RSAYFPVKDVIDGDLCEQ+P+L  D+QRKIADELDRTPGEILKKLE+IRNKI+
Sbjct: 121  RSAYFPVKDVIDGDLCEQYPSLPADMQRKIADELDRTPGEILKKLEDIRNKII 173


>gi|76156310|gb|AAX27526.2| SJCHGC08666 protein [Schistosoma japonicum]
          Length = 219

 Score =  333 bits (855), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 154/219 (70%), Positives = 190/219 (86%), Gaps = 1/219 (0%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFGA 60
           YLY++TLQ+ TGI  A++GNFSGTK  EI VARGK++ELL+P+ N+G++ TL++ E FG 
Sbjct: 1   YLYNITLQRATGITHAVHGNFSGTKQQEIAVARGKIIELLKPDPNTGKVYTLLTCEAFGI 60

Query: 61  IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
           +RS   FRLTGS KDY++VGSDSGR+V+LEY PSKN+F+K+ QETFGKSGCRRIVPGQYL
Sbjct: 61  VRSFMPFRLTGSNKDYLIVGSDSGRVVVLEYIPSKNIFEKVQQETFGKSGCRRIVPGQYL 120

Query: 121 AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
           AV+PKGRA MIGA EKQKLVY++NRD+ ARLTISSPLEAHKS+T+VY + G+D GFDNP+
Sbjct: 121 AVNPKGRAFMIGAVEKQKLVYIMNRDSQARLTISSPLEAHKSNTLVYHMVGVDVGFDNPL 180

Query: 181 FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHV 219
           FA IE+DY +ADQDSTG+AA  A + LT+YELDLGLNHV
Sbjct: 181 FACIEMDYEDADQDSTGEAARGANQLLTYYELDLGLNHV 219


>gi|294460600|gb|ADE75875.1| unknown [Picea sitchensis]
          Length = 173

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 149/173 (86%), Positives = 167/173 (96%)

Query: 1041 MAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTS 1100
            MAGADKFGN+YFVRLPQDVS+EIE+DPTGG+I+WEQGKLNGAPNK+EEI+QFH+GDVVTS
Sbjct: 1    MAGADKFGNVYFVRLPQDVSEEIEDDPTGGRIRWEQGKLNGAPNKVEEIIQFHIGDVVTS 60

Query: 1101 LQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY 1160
            LQKASL+PGGGE +IYGTVMGS+GA+L F+SR+DVDFFSHLEMH+RQE PPLCGRDHM Y
Sbjct: 61   LQKASLIPGGGECLIYGTVMGSIGALLPFTSREDVDFFSHLEMHLRQEQPPLCGRDHMGY 120

Query: 1161 RSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            RS+YFPVKDVIDGDLCEQFPTL  DLQRKIADELDRTPGEILKKLE+IRNKI+
Sbjct: 121  RSSYFPVKDVIDGDLCEQFPTLPPDLQRKIADELDRTPGEILKKLEDIRNKII 173


>gi|68060004|ref|XP_671977.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56488645|emb|CAI04030.1| hypothetical protein PB301494.00.0 [Plasmodium berghei]
          Length = 346

 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/335 (46%), Positives = 225/335 (67%), Gaps = 5/335 (1%)

Query: 209 FYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAV 268
           F ++DLGLNHV +K + P+D  A++L+ +PGG  G SG++VC EN+++YK   H D+   
Sbjct: 1   FGKMDLGLNHVIKKHTIPIDITAHLLIPLPGGQQGHSGLIVCCENYLVYKKIDHDDIYCS 60

Query: 269 IPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDT 328
            PRR ++  E+ + IV    HR KT FF L+Q+EYGD++K+ + H++  V E+  KYFDT
Sbjct: 61  YPRRLEVGEEKNISIVCWTIHRIKTFFFILIQSEYGDLYKIEVNHEDGIVKEIICKYFDT 120

Query: 329 IPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR 388
           +P+  S+CVLKSG LF A+EFGNH  YQF  IG D +    +S     +     + F+ +
Sbjct: 121 VPIANSICVLKSGALFVAAEFGNHFFYQFSGIGNDSNESMCTSNHPSGKNAI--IAFKTQ 178

Query: 389 GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVS 448
            LKNL  ++Q+ SL PI+DM+I +      PQI+ LCGRGPRSSLRIL+ GL++ E+A +
Sbjct: 179 KLKNLYLVDQIYSLSPIVDMKILDAKNSNIPQIYALCGRGPRSSLRILQHGLSIEELANN 238

Query: 449 QLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSL 508
           +LPG P  +WT+KK+ + E+D YI+VSF   TL+L IGETVEEV DS  L    ++ ++L
Sbjct: 239 ELPGKPRYIWTIKKDNSSEYDGYIIVSFEGNTLILEIGETVEEVYDSLLLTNVTTIHINL 298

Query: 509 IGDDSLMQVHPSGIRHIREDGRI-NEWRTPGKRTI 542
           + D+S +QV+ +GIRHI  +G+I  EW  P  + I
Sbjct: 299 LYDNSFIQVYDTGIRHI--NGKIVQEWVPPKNKQI 331


>gi|351711389|gb|EHB14308.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
          Length = 273

 Score =  318 bits (816), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 160/271 (59%), Positives = 206/271 (76%), Gaps = 7/271 (2%)

Query: 250 CAENFVIYKNQG-HPDVRAVIPRR---ADLPAERGVLIVSAATHRQKTLFFFLLQTEYGD 305
           C+EN++ YKN G  PD+R  IPRR    D P ERG++ V + TH  K++FFFL Q E GD
Sbjct: 6   CSENYITYKNFGDQPDIRCPIPRRRNDLDDP-ERGMIFVCSTTHTTKSMFFFLAQAEQGD 64

Query: 306 IFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPD 365
           IFK+TLE D + V+E ++KYFDT+PV A+MCVLK+G+LF ASEFGNH LYQ   +G D D
Sbjct: 65  IFKITLETDKDTVTENQLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDD 124

Query: 366 VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLC 425
            E    + M  EEG    FFQPR LKNLV +++++SL+PI+  + A+L  E+ PQ++  C
Sbjct: 125 -EPEFLSAMPLEEG-DTFFFQPRPLKNLVLVDELDSLLPILFCQTADLANEDTPQLYVAC 182

Query: 426 GRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI 485
           GRGPRSSLR+LR GL VSEMAVS+LPG P+AVWTV +++ DEFDAYI+VSF NATLVLSI
Sbjct: 183 GRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVCRHIEDEFDAYIIVSFMNATLVLSI 242

Query: 486 GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQ 516
           GETV +V+DSGFL TT +L+ SL+GDD+L+ 
Sbjct: 243 GETVGKVTDSGFLGTTSTLSCSLLGDDALVH 273


>gi|161899297|ref|XP_001712875.1| splicing factor 3b [Bigelowiella natans]
 gi|75756369|gb|ABA27263.1| splicing factor 3b [Bigelowiella natans]
          Length = 1158

 Score =  318 bits (816), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 294/1234 (23%), Positives = 542/1234 (43%), Gaps = 97/1234 (7%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            M L++ T+ +       + G+F        ++    +++L +  +   +  + ST  FG 
Sbjct: 1    MKLFNFTIIRSKQYKGIVKGSFLAKDKNSTILYLPNLIDLFKVNSLFSMNLVSSTFTFGI 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNV-FDKIHQETFGKSGCRRIVPGQY 119
            IR +   +     +D++++ S SG   I +YN   NV + +I     G+SGCRR+ PG Y
Sbjct: 61   IRQIQALKFLNQSQDFLIICSGSGSFSIYKYNL--NVGWLRISNHFLGRSGCRRMTPGYY 118

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
            L  D  GR  MI + +K + VY+LN++         P+E HKS+ ++  +  +  GF NP
Sbjct: 119  LESDLIGRICMICSLDKLRYVYILNKNQKNNNLSIFPIEVHKSNALITCLKCVFNGFKNP 178

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
            IFA +ELD  + +     + + E  + L FYE D+GL  +   + + +    + ++ +  
Sbjct: 179  IFATLELD--KKNTHFNSRHSFEICQYLVFYEFDMGLGLLVTSYIDKIPLYFSTIIPIIN 236

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLI-VSAATHRQKTLFFFL 298
              +     L+ + +++  K +   ++    PRR     E+ +    S     ++    + 
Sbjct: 237  NINIRPACLLLSSSYITIKTRYQIELSINFPRRIG-SLEKNIFNGYSYFIQNKENNISYF 295

Query: 299  LQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN-HALYQF 357
            +Q   GDIF V +  +      + ++Y DTI   + + ++     FA SE  N H +Y+ 
Sbjct: 296  IQNSVGDIFVVQMNSNQSWNFFISLEYVDTIIPASDLHMINLDTFFALSENHNFHYIYRL 355

Query: 358  Q-AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
            + +I    ++ +S+ + +     F P FF  R L  L  I Q+E L  I  + I N FE 
Sbjct: 356  RNSIKEKKNLISSNFSTINYSNIFLPCFFIHRNLSTLSIINQIEILANISSLTI-NKFET 414

Query: 417  E--APQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA--YI 472
               + +I+     G  S L  L  G+ V E+A ++LP  P  +W++  N  D  D    I
Sbjct: 415  NSVSQEIYLTSNAGFNSFLHFLEYGIGVLEIATAKLPTEPIGIWSI--NTYDGIDNKFLI 472

Query: 473  VVSFNNATLVLSI------GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
            V+SF   T               EE   +G  ++  ++  S++ + S++QV   GI  I 
Sbjct: 473  VISFETHTYSAFFRFNEKNSSIFEESHKTGLQESVKTIYCSILNETSIIQVFKEGIFWIS 532

Query: 527  EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVAC 586
            +   I+ W  P    I    SN  Q+ + L    ++YFE D    L     H +  ++  
Sbjct: 533  KKNMISRWDIPKGSEISIATSNFSQLFVVLKSTWIMYFEHDNNDNLFLTSSHYLGKNIID 592

Query: 587  LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
            +DI  + E   +S  L + +  N I ILS+D ++  + +    + + P  L  L ++   
Sbjct: 593  IDIIVLFEKHVKSNELLICTESN-ILILSIDQNNMFRNIINYKLPTIPYKLKSLNIKK-- 649

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
            G  D         +   +++G+L    V++ T  +   + RF+G  PPKL     G    
Sbjct: 650  GFID---------IFVSIKSGLLLNLSVELYTFLIKSPKMRFIGNSPPKLAVSKHGYNDI 700

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG---NALRVFTIE 763
            ++  S + ++ + +  + +  P+ YE L+YA++      + G+  + G    +  +  ++
Sbjct: 701  LIIFSDKTFILHNNGNQTIYKPIVYENLKYASTLQ----ISGLTILCGITKKSFNLLILQ 756

Query: 764  RLGETFNETALPL-RYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
             L + F ++ +PL   T    +L+    +++        L++E            + MG 
Sbjct: 757  ELNDVFKKSKIPLVTSTLSTSLLKYFSNILI--------LSSENYTG-------ISSMGA 801

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
            N     +Q+EN   + K    S EQ            S I++ D +           D+E
Sbjct: 802  N-----EQIEN---KRKNKDKSFEQ------------SRIQIADLKKKIIHKTFNCSDHE 841

Query: 883  AAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
               S+  +NF+ K+   LL +   + L    K+    G+++I   + +  S   LHK+ +
Sbjct: 842  TLVSLKLINFYIKKSAFLLLILLTRSLS---KK---QGFLYIVYCINKNFSWLPLHKSFI 895

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLF---PNTIVSINTYRDRIYV 999
               P  +  F+ R++ G    + L+ +GKK++L+ CE  L+   P+ I+      +R+ +
Sbjct: 896  NFKPYCIEVFKNRVVIGGADKIVLFRIGKKKMLKHCEFTLYFLLPSKII---LRSNRMVI 952

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
             D  E     +Y    + + +       R L     +D+DT+ G D FGN+   R+PQ +
Sbjct: 953  SDFLEGLIVTEYNTHLDTMIVVGYSVYGRSLNNIQFLDYDTILGTDYFGNVLVFRIPQLI 1012

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            + +   DP     K++   LN +     E +  HV        K        E +IY T 
Sbjct: 1013 TFKSFLDPR----KYQD--LNSSYIYKSEPI--HVECSFFYRGKYYRYIKSIEIIIYFTN 1064

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
            +GS+G ++   ++ ++  F +L  H+           +  +RS+ +    VIDGD C Q 
Sbjct: 1065 LGSIGILIPIKTKFEIVLFRNLFYHLTLGTNHFLSLSNFKFRSSNYISSRVIDGDFCSQI 1124

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
                   Q KIA  +      I K  E++  KI+
Sbjct: 1125 LEFKKSTQLKIAKAIRIKITSISKIFEDLLFKIM 1158


>gi|350584885|ref|XP_003126937.3| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
          Length = 425

 Score =  312 bits (799), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 146/291 (50%), Positives = 202/291 (69%), Gaps = 1/291 (0%)

Query: 843  LSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLA 902
            L +  +G PKA + +W S IRV++P   NT  L++L+ NEAAFS+    F +      + 
Sbjct: 131  LPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDDWYVL 190

Query: 903  VGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGP 962
            VG AK L   P R++  G+++ Y+ V  G+ LE LHKT VE +P A+  FQGR+L G+G 
Sbjct: 191  VGVAKDLILNP-RSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGK 249

Query: 963  VLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFA 1022
            +LR+YDLGKK+LLRKCENK   N I  I T   R+ V D+QESF + +Y+R+ENQL IFA
Sbjct: 250  LLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFA 309

Query: 1023 DDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA 1082
            DD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +DE++EDPTG K  W++G LNGA
Sbjct: 310  DDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGA 369

Query: 1083 PNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRD 1133
              K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ G +G ++ F+S +
Sbjct: 370  SQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHE 420


>gi|62318969|dbj|BAD94072.1| spliceosomal - like protein [Arabidopsis thaliana]
          Length = 165

 Score =  310 bits (794), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/165 (86%), Positives = 158/165 (95%)

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP 1108
            N+YFVRLPQD+S+EIEEDPTGGKIKWEQGKLNGAPNK++EIVQFHVGDVVT LQKAS++P
Sbjct: 1    NVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIP 60

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK 1168
            GG ES++YGTVMGS+GA+ AF+SRDDVDFFSHLEMHMRQE+PPL GRDHMAYRSAYFPVK
Sbjct: 61   GGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLRGRDHMAYRSAYFPVK 120

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            DVIDGDLCEQFPTL +DLQRKIADELDRTP EILKKLE+ RNKI+
Sbjct: 121  DVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII 165


>gi|114318677|gb|ABI63337.1| putative splicing factor 3b [Hordeum vulgare subsp. vulgare]
          Length = 189

 Score =  307 bits (786), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 144/186 (77%), Positives = 164/186 (88%), Gaps = 3/186 (1%)

Query: 716 LGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
           LGYIH+G FLLTPLS +TLE AASFSSDQC EGVV+VAG+ALR+FTIERLGETFNET++P
Sbjct: 1   LGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIERLGETFNETSIP 60

Query: 776 LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGD 835
           LRYTPR+FV+ PKKK + +IE+D+GA +AE+REAAKKEC EAAG  ENGNGN DQMENGD
Sbjct: 61  LRYTPRKFVILPKKKYLAVIESDKGAFSAEQREAAKKECLEAAGSAENGNGNGDQMENGD 120

Query: 836 ---DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
              D  + + L DEQYGYPKAES+KWVSCIR+LDPRS +TTCLLELQDNEAA SICTVNF
Sbjct: 121 GQEDGEESNTLPDEQYGYPKAESEKWVSCIRILDPRSRDTTCLLELQDNEAAVSICTVNF 180

Query: 893 HDKEHG 898
           HDKEHG
Sbjct: 181 HDKEHG 186


>gi|240280498|gb|EER44002.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus H143]
          Length = 305

 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 140/298 (46%), Positives = 202/298 (67%)

Query: 915  RNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL 974
            R+  AG+IHIYRF EEGK LE +HKT+VE  P+AL  FQGRLLAGIG  LR+YDLG K++
Sbjct: 6    RSCTAGFIHIYRFQEEGKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQM 65

Query: 975  LRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAH 1034
            LRKC+  + P+ +V + T   RI V D+QES  +  Y+  EN+L  F DD + RW T   
Sbjct: 66   LRKCQASVVPHLVVGLQTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWTTCTT 125

Query: 1035 HIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHV 1094
             +D++T+AG DKFGN++ +R P   S+E +ED +G  +  E+  L GAPN++  +  F+ 
Sbjct: 126  MVDYETVAGGDKFGNLWLLRCPAKASEEADEDGSGAHLIHERQYLQGAPNRLNLVAHFYP 185

Query: 1095 GDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCG 1154
             D+ TS+QKA LV GG + +++  + G++  ++ F SR++VDFF  LEM +  ++PPL G
Sbjct: 186  QDLPTSIQKAQLVTGGRDILVWTGLQGTVSMLIPFISREEVDFFQSLEMQLAAQNPPLAG 245

Query: 1155 RDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            RDH+ YRS Y P K  IDGDLCE +  L  D +++IA ELDR+  EI +K+ ++R ++
Sbjct: 246  RDHLIYRSYYAPAKGTIDGDLCETYLLLPNDKKQQIAGELDRSVREIERKIADMRTQV 303


>gi|449706784|gb|EMD46555.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica KU27]
          Length = 1079

 Score =  292 bits (747), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 257/938 (27%), Positives = 420/938 (44%), Gaps = 124/938 (13%)

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
             L+Q E GD+F++             I+YFDTIP + S  +     +F+ASE  NH + +
Sbjct: 238  LLIQNELGDLFRILPNSST-------IEYFDTIPPSVSWSI-NGNIIFSASESQNHLVLK 289

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               +     +++S +             ++P+ L   +    + S  P+  + + +    
Sbjct: 290  VPPLTIP--IQSSFT-------------YKPQSLYFNIS-TSISSHHPLTSIDVVD--SH 331

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
            E  QI    G+G RSSL+IL  GL   E     L   P  +WT+K   N++   Y+V+  
Sbjct: 332  EVLQIRAFVGKGSRSSLKILTHGLNPDECMSLSLQH-PRNIWTLKP-YNEQTHQYVVIGL 389

Query: 477  NNATLVL-SIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
             N T VL ++ + +++  + G      +L   +  D +L+Q+H  GI  I  + +++E  
Sbjct: 390  ENQTYVLKTLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHGIITILNE-KLSEQD 448

Query: 536  TPGKRTIVKVGSNRLQVVIAL----SGGELIYFEVDM-TGQLLEVEKHEMSGDVACLDIA 590
               +RTI+   S+  QVVIAL    S  E++YFE +  T +L EVE+  +  ++  + + 
Sbjct: 449  PGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYNTETKKLAEVERRIIRSNIIAMALG 508

Query: 591  SVPEGRKRSRFLAVGSYDNTIRILSLDPDD-CMQILSVQ-SVSSPPESLLFLEVQASVGG 648
                G+ +   +A    +    IL+L+ +   +QIL +  +V    ES++  +       
Sbjct: 509  DFENGKAKK--VAYICDNGMANILTLEKESKFLQILEINITVEGEAESIILTQF------ 560

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
             +    P  LFL  G+++G  +   V     +L     + +G  P        GG   ++
Sbjct: 561  -NEISEPF-LFLGIGMKDGCCYGYKVIGKNSELM--WCKLIGTDPVVFGQYEFGGNIGVI 616

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
              SS     Y +  R   TP+SY+ L+  A F +D   E +  +  + L V  I  L + 
Sbjct: 617  MSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGITNDELTVIAIGSLDDR 676

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
            F     PL YTPR+ +                          K   F    +  +   N+
Sbjct: 677  FTYDEQPLLYTPRKVI--------------------------KSNYFPTTVLCSDNKSNL 710

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
                N   +N+ +  ++ + G    E  KW S + ++D    N+      + +EA     
Sbjct: 711  ---YNPTIDNETNEFNERKIGIDLQEDGKWASEVGIID----NSLFKSYFKTDEAIICGA 763

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             V+F  K+      V   K ++          +I++Y      K+ +L+HKT VE I  A
Sbjct: 764  HVSFKKKQCFISSQVKHYKKMK-------GECWINVYNL----KTFKLIHKTPVEDICHA 812

Query: 949  LCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHF 1008
            L     RLLAGIG  LRLYDLGK+ L+RKCE   FP+ I S+    D+I VG +   F +
Sbjct: 813  LTSCGERLLAGIGTTLRLYDLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIY 872

Query: 1009 CKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1068
              Y  D N L I   D +   LTA+  +D  +  G DK G+++           I E  T
Sbjct: 873  VNYDSDANILSITEKDRIWHSLTASTILDETSTIGFDKLGSVF-----------ITETNT 921

Query: 1069 GGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES--------------- 1113
                   Q  L        EIVQ++VGDVVTS+    +  G  ++               
Sbjct: 922  NSN----QLNLTDIIPLSNEIVQWYVGDVVTSVSVNEIWKGITDNTNEYTFEEQIKENKN 977

Query: 1114 -VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
             +IY  +MG +G ++ F+ R+DV+FFS LEM ++  + PL      +YR   +P   VID
Sbjct: 978  VIIYSCLMGRIGVLIPFNFREDVEFFSKLEMEIKNNYSPLLSNSFDSYRGTNYPGIGVID 1037

Query: 1173 GDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            GDLC+ F  +   LQ +IA+ L+ TP +I  K E+ ++
Sbjct: 1038 GDLCDYFNQMDPKLQLQIANNLEMTPVQIQLKCEQFKH 1075



 Score = 43.1 bits (100), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 11/141 (7%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARG-KVLELL---RPENSGRIETLVSTE 56
           M     TL QPT I +  NGN    ++ + VV +  + +E +     EN   ++  V  +
Sbjct: 1   MQFIDYTLIQPTAITSCCNGNIRSKESNDFVVVKAERKIEFITVDSNENDIVLDLFVQLD 60

Query: 57  IFGAIRSLAQFR-LTGSQKDYIVVG-SDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRI 114
            +  + ++   + L+ +Q DYI++   D+  I+ +E    K V     Q    +    R 
Sbjct: 61  SYNTVNNVLCLKNLSNNQTDYIIIALCDAINIIQMEGFKFKLV-----QRIDLEKKTERF 115

Query: 115 VPGQYLAVDPKGRAVMIGACE 135
           +  +YLAVD +  + + GA +
Sbjct: 116 IKSRYLAVDEENSSFITGAIQ 136


>gi|67473926|ref|XP_652712.1| splicing factor 3b subunit 3 [Entamoeba histolytica HM-1:IMSS]
 gi|56469590|gb|EAL47325.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica
            HM-1:IMSS]
          Length = 1108

 Score =  292 bits (747), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 265/982 (26%), Positives = 432/982 (43%), Gaps = 125/982 (12%)

Query: 253  NFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLE 312
            N +I  N   P +  ++P R  +     V I +            L+Q E GD+F++   
Sbjct: 224  NQIIIYNNYTPSIY-LLPHRETMNENIIVHITNVLFVPLNNQNVLLIQNELGDLFRILPN 282

Query: 313  HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
                      I+YFDTIP + S  +     +F+ASE  NH + +   +            
Sbjct: 283  SST-------IEYFDTIPPSVSWSI-NGDIIFSASESQNHLVLKVPPLT----------- 323

Query: 373  LMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSS 432
             +  +  F    ++P+ L   +    + S  P+  + + +    E  QI    G+G RSS
Sbjct: 324  -IPIQSSFT---YKPQSLYFNIS-TSISSHHPLTSIDVVD--SHEVLQIRAFVGKGSRSS 376

Query: 433  LRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL-SIGETVEE 491
            L+IL  GL   E     L   P  +WT+K   N++   Y+V+   N T VL ++ + +++
Sbjct: 377  LKILTHGLNPDECMSLSLQH-PRNIWTLKP-YNEQTHQYVVIGLENQTYVLKTLPDALKQ 434

Query: 492  VSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQ 551
              + G      +L   +  D +L+Q+H  GI  I  + +++E     +RTI+   S+  Q
Sbjct: 435  CPECGIRPNVQTLHAGMFIDGTLVQIHAHGIITILNE-KLSEQDPGAQRTILVGTSSSCQ 493

Query: 552  VVIAL----SGGELIYFEVDM-TGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGS 606
            VVIAL    S  E++YFE +  T +L EVE+  +  ++  + +     G+ +   +A   
Sbjct: 494  VVIALKNAQSKCEIVYFEYNTETKKLAEVERRIIRSNIIAMALGDFENGKAKK--VAYIC 551

Query: 607  YDNTIRILSLDPDD-CMQILSVQ-SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGL 664
             +    IL+L+ +   +QIL +  +V    ES++  +        +    P  LFL  G+
Sbjct: 552  DNGMANILTLEKESKFLQILEINITVEGEAESIILTQF-------NEISEPF-LFLGIGM 603

Query: 665  QNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRF 724
            ++G  +   V     +L     + +G  P        GG   ++  SS     Y +  R 
Sbjct: 604  KDGCCYGYKVIGKNSELM--WCKLIGTDPVVFGQYEFGGNIGVIMSSSTMIFMYSYFSRI 661

Query: 725  LLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFV 784
              TP+SY+ L+  A F +D   E +  +  + L V  I  L + F     PL YTPR+ +
Sbjct: 662  EFTPISYQPLKALAPFITDFSGESIAGITNDELTVIAIGSLDDRFTYDEQPLLYTPRKVI 721

Query: 785  LQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLS 844
                                      K   F    +  +   N+    N   +N+ +  +
Sbjct: 722  --------------------------KSNYFPTTVLCSDNKSNL---YNPTIDNETNEFN 752

Query: 845  DEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVG 904
            + + G    E  KW S + ++D    N+      + +EA      V+F  K+      V 
Sbjct: 753  ERKIGIDLQEDGKWASEVGIID----NSLFKSYFKTDEAIICGAHVSFKKKQCFISSQVK 808

Query: 905  TAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVL 964
              K ++          +I++Y      K+ +L+HKT VE I  AL     RLLAGIG  L
Sbjct: 809  HYKKMK-------GECWINVYNL----KTFKLIHKTPVEDICHALTSCGERLLAGIGTTL 857

Query: 965  RLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD 1024
            RLYDLGK+ L+RKCE   FP+ I S+    D+I VG +   F +  Y  D N L I   D
Sbjct: 858  RLYDLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIYVNYDSDANILSITEKD 917

Query: 1025 SVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPN 1084
             +   LTA+  +D  +  G DK G+++           I E  T       Q  L     
Sbjct: 918  RIWHSLTASTILDETSTIGFDKLGSVF-----------ITETNTNSN----QLNLTDIIP 962

Query: 1085 KMEEIVQFHVGDVVTSLQKASLVPGGGES----------------VIYGTVMGSLGAMLA 1128
               EIVQ++VGDVVTS+    +  G  ++                +IY  +MG +G ++ 
Sbjct: 963  LSNEIVQWYVGDVVTSVSVNEIWKGITDNTNEYTFEEQIKENKNVIIYSCLMGRIGVLIP 1022

Query: 1129 FSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQR 1188
            F+ R+DV+FFS LEM ++  + PL      +YR   +P   VIDGDLC+ F  +   LQ 
Sbjct: 1023 FNFREDVEFFSKLEMEIKNNYSPLLSNSFDSYRGTNYPGIGVIDGDLCDYFNQMDPKLQL 1082

Query: 1189 KIADELDRTPGEILKKLEEIRN 1210
            +IA+ L+ TP +I  K E+ ++
Sbjct: 1083 QIANNLEMTPVQIQLKCEQFKH 1104



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 11/141 (7%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARG-KVLELL---RPENSGRIETLVSTE 56
           M     TL QPT I +  NGN    ++ + VV +  + +E +     EN   ++  V  +
Sbjct: 1   MQFIDYTLIQPTAITSCCNGNIRSKESNDFVVVKAERKIEFITVDSNENDIVLDLFVQLD 60

Query: 57  IFGAIRSLAQFR-LTGSQKDYIVVG-SDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRI 114
            +  + ++   + L+ +Q DYI++   D+  I+ +E    K V     Q    +    R 
Sbjct: 61  SYNTVNNVLCLKNLSNNQTDYIIIALCDAINIIQMEGFKFKLV-----QRIDLEKKTERF 115

Query: 115 VPGQYLAVDPKGRAVMIGACE 135
           +  +YLAVD +  + + GA +
Sbjct: 116 IKSRYLAVDEENSSFITGAIQ 136


>gi|407039323|gb|EKE39583.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
          Length = 1108

 Score =  290 bits (742), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 264/982 (26%), Positives = 433/982 (44%), Gaps = 125/982 (12%)

Query: 253  NFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLE 312
            N +I  N   P +  ++P R  +     V I +            L+Q E GD+F++   
Sbjct: 224  NQIIIYNHYTPSIY-LLPHRETMNENIIVHITNVLFVPLNNQNVLLIQNELGDLFRILPN 282

Query: 313  HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
                      I+YFDTIP + +  +     +F+ASE  NH + +   +     +++S + 
Sbjct: 283  SST-------IEYFDTIPPSVNWSI-NGDIIFSASESQNHLVLKVPPLTIP--IQSSPT- 331

Query: 373  LMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSS 432
                        ++P+ L   +    + S  P+  + + +    E  QI    G+G RSS
Sbjct: 332  ------------YKPQSLYFNIS-TSISSHHPLTSIDVVD--SHEVLQIRAFVGKGSRSS 376

Query: 433  LRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL-SIGETVEE 491
            L+IL  GL   E     L   P  +WT+K   N++   Y+V+   N T VL ++ + +++
Sbjct: 377  LKILTHGLNPDECMSLSLQH-PRNIWTLKP-YNEQTHQYVVIGLENQTYVLKTLPDALKQ 434

Query: 492  VSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQ 551
              + G      +L   +  D +L+Q+H  GI  I  + +++E     +RTI+   S+  Q
Sbjct: 435  CPECGIRPNVQTLHAGMFIDGTLVQIHAHGIITILNE-KLSEQDPGAQRTILVGTSSSCQ 493

Query: 552  VVIAL----SGGELIYFEVDM-TGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGS 606
            VVIAL    S  E++YFE +  T +L EVE+  +  ++  + +     G+ +   +A   
Sbjct: 494  VVIALKNAQSKCEIVYFEYNTETKKLAEVERRIIRSNIIAMALGDFENGKAKK--VAYIC 551

Query: 607  YDNTIRILSLDPDD-CMQILSVQ-SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGL 664
             +    IL+L+ +   +QIL    +V    ES++  +        +    P  LFL  G+
Sbjct: 552  DNGMANILTLEKESKFLQILETNITVEGEAESIVLTQF-------NEISEPF-LFLGIGM 603

Query: 665  QNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRF 724
            ++G  +   V     +L     + +G  P        GG   ++  SS     Y +  R 
Sbjct: 604  KDGCCYGYKVIGKNSELM--WCKLIGTDPVVFGQYEFGGNIGVIMSSSTMIFMYSYFSRI 661

Query: 725  LLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFV 784
              TP+SY+ L+  A F +D   E +  +  + L V  I  L + F     PL YTPR+ +
Sbjct: 662  EFTPISYQPLKALAPFITDFSGESIAGITNDELTVIAIGSLDDRFTYDEQPLLYTPRKVI 721

Query: 785  LQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLS 844
                                      K   F    +  +   N+    N   +N+ +  +
Sbjct: 722  --------------------------KSNYFPTTVLCSDNKSNL---YNPTIDNETNEFN 752

Query: 845  DEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVG 904
            + + G    E  KW S + ++D    N+      + +EA      V+F  K+      V 
Sbjct: 753  ERKIGIDLQEDGKWASEVGIID----NSIFKSYFKTDEAIICGAHVSFKKKQCFISSQVK 808

Query: 905  TAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVL 964
              K ++          +I++Y      K+ +L+HKT VE I  AL     RLLAGIG  L
Sbjct: 809  HYKKMK-------GECWINVYNL----KTFKLIHKTPVEDICHALTSCGERLLAGIGTTL 857

Query: 965  RLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD 1024
            RLYDLGK+ L+RKCE   FP+ I S+    D+I VG +   F +  Y  D N L I   D
Sbjct: 858  RLYDLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIYVNYDSDANILSITEKD 917

Query: 1025 SVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPN 1084
             +   LTA+  +D  +  G DK G+++           I E  T       Q  L     
Sbjct: 918  RIWHSLTASTILDETSTIGFDKLGSVF-----------ITETNTNSN----QLNLTDIIP 962

Query: 1085 KMEEIVQFHVGDVVTSLQKASLVPGGGES----------------VIYGTVMGSLGAMLA 1128
               EIVQ++VGDVVTS+    +  G  ++                +IY  +MG +G ++ 
Sbjct: 963  LSNEIVQWYVGDVVTSVSVNEIWKGITDNTNEYTFEEQIKENKNVIIYSCLMGRIGVLIP 1022

Query: 1129 FSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQR 1188
            F+ R+DV+FFS LEM ++  + PL      +YR   +P   VIDGDLC+ F  +   LQ 
Sbjct: 1023 FNFREDVEFFSKLEMEIKNNYSPLLSNSFDSYRGTNYPGIGVIDGDLCDYFNQMDPKLQL 1082

Query: 1189 KIADELDRTPGEILKKLEEIRN 1210
            +IA+ L+ TP +I  K E+ ++
Sbjct: 1083 QIANNLEMTPVQIQLKCEQFKH 1104



 Score = 41.6 bits (96), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 11/141 (7%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARG-KVLELL---RPENSGRIETLVSTE 56
           M     TL QPT I +  NGN    ++ + VV +  + +E +     +N   ++  V  +
Sbjct: 1   MQFIDYTLIQPTAITSCCNGNIRSKESNDFVVVKAERKIEFITVDSNDNDIVLDLFVQLD 60

Query: 57  IFGAIRSLAQFR-LTGSQKDYIVVG-SDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRI 114
            +  + ++   + L+ +Q DYI++   D+  I+ +E    K V     Q    +    R 
Sbjct: 61  SYNTVNNVLCLKNLSSNQTDYIIIALCDAINIIQMEGFKFKLV-----QRIDLEKKTERF 115

Query: 115 VPGQYLAVDPKGRAVMIGACE 135
           +  +YLAVD +  + + GA +
Sbjct: 116 IKSRYLAVDEENSSFITGAIQ 136


>gi|70954357|ref|XP_746229.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56526771|emb|CAH77136.1| hypothetical protein PC000016.02.0 [Plasmodium chabaudi chabaudi]
          Length = 372

 Score =  288 bits (738), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 152/380 (40%), Positives = 233/380 (61%), Gaps = 11/380 (2%)

Query: 837  ENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE 896
            +N+ + L  ++ G PKA + KW SCI++++P +      + L+  EAA S+C       E
Sbjct: 1    DNEEEELLYDRIGTPKAGAGKWGSCIKIINPINLQVIDKVSLELEEAALSVCACEL---E 57

Query: 897  HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRL 956
                L VGT   +     RN+ +  + +Y + +    L LLH T +E  P   C F GR+
Sbjct: 58   ALHCLIVGTTTNMTL-KNRNVPSASLRVYTY-DINYKLNLLHITPIEDQPYCFCPFNGRV 115

Query: 957  LAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN 1016
            +  +G  LR+Y LGKK+LL+KCE K  P  IVSI    DRI+  DI+ES     Y  ++N
Sbjct: 116  IVSVGNKLRIYALGKKKLLKKCEYKDIPEAIVSIKVSGDRIFASDIRESVLIFFYDSNQN 175

Query: 1017 QLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ 1076
             + + +DD +PRW+T +  +D  T+  ADKF +++ +R+P++   E  E     K  W  
Sbjct: 176  VIRLISDDIIPRWITCSEILDHHTIMAADKFDSVFILRVPEEAKQE--EYGIANKC-WYG 232

Query: 1077 GKLNGAPNK---MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRD 1133
            G++  +  K   ME I+ FH+G++VTSLQK  L P   E +IY T+MG++GA + + +++
Sbjct: 233  GEVISSSTKNRKMEHIMSFHIGEIVTSLQKVKLSPASSECIIYSTIMGTIGAFIPYDNKE 292

Query: 1134 DVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADE 1193
            +++   HLE+ +R E   LCGR+H+ +RS Y PV+ VIDGDLCEQF +L  D+QRK+A +
Sbjct: 293  ELELTQHLEIILRTEKHALCGREHIFFRSYYHPVQHVIDGDLCEQFSSLPFDVQRKVASD 352

Query: 1194 LDRTPGEILKKLEEIRNKIV 1213
            L++TP EIL+KLE+IRNKI+
Sbjct: 353  LEKTPDEILRKLEDIRNKIL 372


>gi|167386195|ref|XP_001737658.1| spliceosomal protein sap [Entamoeba dispar SAW760]
 gi|165899468|gb|EDR26056.1| spliceosomal protein sap, putative [Entamoeba dispar SAW760]
          Length = 1079

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 253/938 (26%), Positives = 421/938 (44%), Gaps = 124/938 (13%)

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
             L+Q E GD+F++             I+YFDTI  + S  +     +F+ASE  NH + +
Sbjct: 238  LLIQNELGDLFRILPNSST-------IEYFDTISPSVSWSI-NGDIIFSASESQNHLVLK 289

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
              ++     ++ SS+             ++P+ L   +    + S  P+  + + +    
Sbjct: 290  VPSLTIP--IQPSST-------------YKPQSLYFNIS-TSISSHHPLTSVDVVD--SH 331

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
            E  QI    G+G RSSL+IL  GL   E     L   P  +WT+K   N++   Y+V+  
Sbjct: 332  EVFQIRAFVGKGSRSSLKILTHGLNPDECMSLSLQH-PRNIWTLKP-YNEQTHQYVVIGL 389

Query: 477  NNATLVL-SIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWR 535
             N T VL ++ + +++  + G      +L   +  D +L+Q+H  GI  I  + +++E  
Sbjct: 390  ENQTYVLKTLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHGIITILNE-KLSEQD 448

Query: 536  TPGKRTIVKVGSNRLQVVIAL----SGGELIYFEVDM-TGQLLEVEKHEMSGDVACLDIA 590
               +RTI+   S+  QVVIAL    S  E++YFE +  T +L EVE+  +  ++  + + 
Sbjct: 449  PGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYNTETKKLAEVERRIIRSNIIAMALG 508

Query: 591  SVPEGRKRSRFLAVGSYDNTIRILSLDPDD-CMQILSVQ-SVSSPPESLLFLEVQASVGG 648
                G+ +   +A    +    IL+L+ +   +QIL    +V    ES++  +       
Sbjct: 509  DFENGKAKK--VAYICDNGMANILTLEKESKFLQILETNITVEGEAESIILTQF------ 560

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
             +    P  LFL  G+++G  +   ++    +L     + +G  P        GG   ++
Sbjct: 561  -NEISEPF-LFLGIGMKDGYCYGYKINGKNSELM--WCKLIGNDPVVFGQYEFGGNIGVI 616

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
              SS     Y +  R   TP+SY+ L+  A F +D   E +  +  + L V  I  L + 
Sbjct: 617  MSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGITNDELTVIAIGSLDDR 676

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
            F     PL YTPR+ +                          K   F    +  +   N+
Sbjct: 677  FTYDEQPLLYTPRKII--------------------------KSNYFPTTVLCSDNKSNL 710

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
                N   +N+ +  ++ + G    E  KW S + +++    N+      + +EA     
Sbjct: 711  ---YNPIIDNETNEFNERKIGVDLQEDGKWASEVGIIN----NSIFKSYFKTDEAIICGA 763

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             V+F  K+      V   K ++          +I++Y      K+ +L+HKT VE I  A
Sbjct: 764  HVSFKKKQCFISSQVKHYKKMK-------GECWINVYNL----KTFKLIHKTPVEDICRA 812

Query: 949  LCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHF 1008
            L     RLLAGIG  LRLYDLGK+ L+RKCE   FP+ I S+    D+I VG +   F +
Sbjct: 813  LTSCGERLLAGIGTTLRLYDLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIY 872

Query: 1009 CKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1068
              Y  D N L I   D +   LTA+  +D  +  G DK G+++            E + T
Sbjct: 873  VNYDSDANILSITEKDRIWHSLTASTILDETSTIGFDKLGSVFIT----------ETNTT 922

Query: 1069 GGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES--------------- 1113
              ++      L        EIVQ++VGDVVTS+    +  G  ++               
Sbjct: 923  SNQL-----NLTNVIPLSNEIVQWYVGDVVTSVSVNEIWKGITDNINEYTFEEQIKENKN 977

Query: 1114 -VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
             +IY  +MG +G ++ F+ R+DV+FFS LEM ++  + PL      +YR   +P   VID
Sbjct: 978  VIIYSCLMGRIGVLIPFNFREDVEFFSKLEMEIKNNYSPLLSNSFDSYRGTNYPGIGVID 1037

Query: 1173 GDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            GDLC+ F  +   LQ +IA+ L+ TP +I  K E+ ++
Sbjct: 1038 GDLCDYFNQMDPKLQLQIANNLEMTPVQIQLKCEQFKH 1075


>gi|5817204|emb|CAB53699.1| hypothetical protein [Homo sapiens]
          Length = 215

 Score =  286 bits (733), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 124/211 (58%), Positives = 169/211 (80%)

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+QESF + +Y+R+ENQL IFADD+ PRW+T A  +D+DT+AGADKFGNI  VRLP + +
Sbjct: 2    DVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTN 61

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVM 1120
            DE++EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG ES++Y T+ 
Sbjct: 62   DEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLS 121

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFP 1180
            G +G ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF 
Sbjct: 122  GGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFN 181

Query: 1181 TLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            ++  + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 182  SMEPNKQKNVSEELDRTPPEVSKKLEDIRTR 212


>gi|402579535|gb|EJW73487.1| hypothetical protein WUBG_15606 [Wuchereria bancrofti]
          Length = 254

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 141/243 (58%), Positives = 184/243 (75%), Gaps = 6/243 (2%)

Query: 466 DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
           D+FD++IVVSF NATLVLSIGETVEEV+DSGFL TTP+L  +LIGDD+L+QV+P GIRHI
Sbjct: 11  DKFDSHIVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHI 70

Query: 526 REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSGDV 584
           R D R+NEW+ PGKRTI+K   NR QV IAL+GGEL+YFE+D+TGQL E  E+ E+  DV
Sbjct: 71  RADRRVNEWKAPGKRTIMKCALNRRQVAIALAGGELVYFELDVTGQLNEYTERRELPADV 130

Query: 585 ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
            C+ ++ +PEG  RSRFL VG  D T+RI+SLDP DC+  LS+Q++ S PES++ LE+  
Sbjct: 131 LCMSLSEIPEGELRSRFLTVGLADKTVRIISLDPQDCLSPLSMQALPSEPESIIVLEM-- 188

Query: 645 SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             G E      +++ LN GLQNG L RT VD VTG+L+D+R+R+LG +  KLF V +  +
Sbjct: 189 -FGTE--IQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKLFRVRIQSK 245

Query: 705 AAM 707
            A+
Sbjct: 246 DAV 248


>gi|367015172|ref|XP_003682085.1| hypothetical protein TDEL_0F00630 [Torulaspora delbrueckii]
 gi|359749747|emb|CCE92874.1| hypothetical protein TDEL_0F00630 [Torulaspora delbrueckii]
          Length = 1254

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 221/733 (30%), Positives = 356/733 (48%), Gaps = 92/733 (12%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF-------SGTKTPEIVVARGKVLELLRPENSGRIETLV 53
           +YLY LTL++ T  + +  G+F         +K  ++ +A    +EL    N G +  L+
Sbjct: 8   LYLYHLTLKRQTNYVNSCIGHFIDREQDNKRSKDLQLCIATETHIELYDVAN-GTLRRLI 66

Query: 54  STEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN-PSKN--VFDKIHQETFGKSG 110
              IF  + ++  FR+  S    + + SDSG + I +++ PS N      +  +   +S 
Sbjct: 67  EIPIFATLTTIESFRIENSSVSLLAMTSDSGNLTIAQFHRPSLNRIALKTVLNQPMTRSQ 126

Query: 111 CRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSIC 170
            RR+ P  Y+ VDP GR +++ A EK KL +VLN +    L I SPLEA +   I   I 
Sbjct: 127 VRRVSPISYMTVDPYGRCLLLSAIEKNKLCFVLNTNNDGSLVIQSPLEAIRPDVITLDIT 186

Query: 171 GIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNG 230
             D  +DNP FAA+E+D +                +L FY LDL LNH+ +K    V++ 
Sbjct: 187 SCDVQYDNPCFAALEIDANNY--------------HLVFYILDLSLNHIVKKAEYKVNSE 232

Query: 231 ANMLVTVPGGGDGPSG-----------VLVCAENFVIYKNQGHPDVRAVIPRRADLPAER 279
           AN ++ +P                   VLV  EN+++ K     D+      +  LP   
Sbjct: 233 ANFIMGIPALSKYKINCVSNTDEINPFVLVGFENYLMVK-----DMNGFFSLKVPLPNRN 287

Query: 280 G--VLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE--LKIKYFDTIPVTASM 335
           G    I+S A    K  FF LLQ+ +GD++K+T+E D     +  + I YFDTI     +
Sbjct: 288 GQKATIISGALQTLKKSFFILLQSNFGDLYKLTIEPDGNDRDKPLVSISYFDTIFQAEKL 347

Query: 336 CVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVR 395
            + K+GYLFA SE G+  L+QF ++G D      S  +   + G Q  F     L NL  
Sbjct: 348 HIFKNGYLFANSELGDSYLFQFDSLGDD------SEKITSADPGKQLRFEPTETLNNLSI 401

Query: 396 IEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPS 455
           +   ++L P++  ++ N          T+      +S RIL  G+   +   S LP    
Sbjct: 402 VSTKKNLNPLLSTQVTN------SNPLTIAA----NSTRILTNGVRFEDDISSPLPPGAE 451

Query: 456 AVWTVKKNVNDEFDAYIVVSFNNATLVLSIGE-TVEEVS---DSGFLDTTPSLAVSLIGD 511
            +WT+K    +     + + F  +T++L I   T+EE++   +   +    SL V+ + D
Sbjct: 452 NIWTIKVP-GESIHKLLFLGFPKSTMILEIESGTLEEMNSLKNPFKVKGDKSLYVAAMTD 510

Query: 512 DSLMQVHPSGIRHIREDG---RIN-EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD 567
             ++QV  + +R +  D      N +W  P    IV   S+  Q+ I LS  E++YFE+ 
Sbjct: 511 QYIIQVCENELRQVVSDKDGFTCNLKWFPPAGIRIVCATSSETQLSIGLSNCEIVYFEI- 569

Query: 568 MTGQLLEVE-KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSL---DPDDCMQ 623
            +G L E + K E+   +  + +       KRS +LAVGS D+T++++SL   D D+ M+
Sbjct: 570 TSGSLHESQNKIELDEPITSISMVR----SKRSDYLAVGSNDSTVKLISLKRSDMDEFME 625

Query: 624 ILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSD 683
           I+S+Q+V +P   L  ++              ++L L+ GL+NGV  R++V+   GQL D
Sbjct: 626 IVSIQTVLAPVTDLKLIQ-------------DSNLELHIGLENGVYCRSMVNNNDGQLYD 672

Query: 684 SRSRFLGLRPPKL 696
            R++FLG RP  L
Sbjct: 673 VRTKFLGPRPVTL 685



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 150/333 (45%), Gaps = 52/333 (15%)

Query: 929  EEGKSLE--LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNT 986
            ++GK+ +  LLHKT +E     +  F  +LL  I   L L+ LGKK+LL++  ++  P+ 
Sbjct: 918  KKGKTFDFRLLHKTLIEDQVTCMIPFSDKLLVPIFGSLVLFGLGKKQLLKQSFSETTPSI 977

Query: 987  --IVSINTYRD-RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAG 1043
              I ++  +++ R+ VGDI+ES       + +N     ADD V R +T    +D  T+ G
Sbjct: 978  TKITALANWKNQRVAVGDIRESVTLFLLDKSKNAFLPIADDIVKRHVTTLAFLDVSTILG 1037

Query: 1044 ADKFGNIYFVR--------LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVG 1095
             DKFGNI+ +R        L Q     IE       +K     +   P K+     F+V 
Sbjct: 1038 GDKFGNIWTLRLQSENEKTLSQCFPHAIERLQQLPPMKKYAPNIMECPFKLTLTNMFYVN 1097

Query: 1096 DVVTSLQ-KASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP---- 1150
            D+  ++    SL      +++Y  + G++G +    SR ++  F  +E  M +       
Sbjct: 1098 DIPMNIHILESLQMSDRPAIMYSGLQGTIGCLTPLLSRAEISNFKTIESMMSEADERFYL 1157

Query: 1151 ---------------------------------PLCGRDHMAYRSAYFPVKDVIDGDLCE 1177
                                              +  RDH+ YRS Y PV++++DGDLCE
Sbjct: 1158 KSESEVVHDDSLKEDSEFELSNKSQGDVPEGSYSIVDRDHLRYRSYYAPVRNIVDGDLCE 1217

Query: 1178 QFPTLSLDLQRKI-ADELDRTPGEILKKLEEIR 1209
            +F  LS   Q+ + A+     P  I+K + +IR
Sbjct: 1218 RFIDLSYTAQKFLCAESKTLNPDTIIKIINDIR 1250


>gi|390347911|ref|XP_783190.3| PREDICTED: splicing factor 3B subunit 3-like, partial
           [Strongylocentrotus purpuratus]
          Length = 190

 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 129/189 (68%), Positives = 162/189 (85%), Gaps = 1/189 (0%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           M+LY+LTLQ+ TGI+  I+GNF+GTK  E+VV RGK+LEL++ + N+G++ T++S E+FG
Sbjct: 1   MFLYALTLQRATGIVQCIHGNFAGTKQQELVVGRGKLLELIKIDPNTGKLYTVLSHEVFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IR+L  FRLTG  KD+IVVGSDSGRI+ILEYN +KN  D++HQETFGKSGCRRIVPGQ+
Sbjct: 61  IIRTLMPFRLTGGSKDFIVVGSDSGRIIILEYNAAKNCLDRVHQETFGKSGCRRIVPGQF 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           LAVDPKGRAVM+GA EKQKLVY+LNRD  ARLTISSPLEAHKS+T  + I G+D GF+NP
Sbjct: 121 LAVDPKGRAVMVGALEKQKLVYILNRDAQARLTISSPLEAHKSNTFSFHIVGVDVGFENP 180

Query: 180 IFAAIELDY 188
           +FA +E+DY
Sbjct: 181 MFACLEIDY 189


>gi|302308830|ref|NP_985929.2| AFR382Wp [Ashbya gossypii ATCC 10895]
 gi|442570014|sp|Q753D4.2|RSE1_ASHGO RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|299790815|gb|AAS53753.2| AFR382Wp [Ashbya gossypii ATCC 10895]
          Length = 1288

 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 211/707 (29%), Positives = 360/707 (50%), Gaps = 85/707 (12%)

Query: 26  KTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGR 85
           K  +I +A    +EL   E  GR+  L +  +FG I  L+     G  +  ++V  DSG+
Sbjct: 54  KQLQICMATQTQVELYDVE-EGRLRRLFTRTVFGTITGLSSVVADG--RSVLIVVGDSGK 110

Query: 86  IVIL--EYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVL 143
           + +L  +Y   +   + +  E   +SG RR+ P  +++VDP+GR V++ A E+ K+ Y++
Sbjct: 111 MSVLRFKYEGGRVRLEALFNEPLSRSGVRRLSPQAHVSVDPQGRCVLLSAMERNKVCYLM 170

Query: 144 NRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEA 203
           +      L +SSPLEA++ + +       D  FDNPIFA++E+D             ++ 
Sbjct: 171 DV-KQGELQVSSPLEANRPNYVTMQTAACDVAFDNPIFASLEIDL------------ADG 217

Query: 204 QKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVP-----------GGGD--GPSG--- 246
            K L FY LDLGLNH+++    E  D  AN +++VP           GG D   P     
Sbjct: 218 AKYLFFYMLDLGLNHMAKVADFELGDGSANFIMSVPDLEQYGINTKAGGPDDGDPDAIVP 277

Query: 247 -VLVCAENFVIYKN-QGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYG 304
            VL+  +N+V  K+ +G  D+   IP R      +  +I +    + K  FF LLQ+ +G
Sbjct: 278 FVLMGFDNYVSLKDLRGRYDINVQIPTRK---LSQKTIITAGTVQKLKRDFFMLLQSNHG 334

Query: 305 DIFKVTLEHDNEHVSE-LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGAD 363
           D++KV +  D +  S  + I YFDTIP   ++ + K GY+FA SE+GN  LYQF+ +  D
Sbjct: 335 DLYKVKILPDEKTASPVVTISYFDTIPQAQNLHIFKHGYMFANSEYGNSYLYQFENL--D 392

Query: 364 PDVEASSSTLMETEEGFQPVFFQPRG-LKNLVRIEQVESLMPIMDMRIANLFEEEAPQIF 422
            + E+  +++M        +  +PR  LKNL+  +++  + PI+  ++     E  P   
Sbjct: 393 DEEESMLTSVMPGRR----LIIEPRTVLKNLLVADKLALVNPILSSQLT----ERVPLTI 444

Query: 423 TLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLV 482
                G    +R+   G+   ++  S LP  P  +WTV  N    F   + ++   +T++
Sbjct: 445 ATSTLG---DVRLFTAGVNFMDIISSPLPAAPLDIWTVATN-GSRFHKLLFIALQESTMI 500

Query: 483 LSIGE-TVEEVS---DSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----E 533
           L I   TVEE+    +   +    ++ ++ +G  S++QV  + + HI E+   +     E
Sbjct: 501 LKIAAGTVEELELPHNPFVIAQDKTVLIAHMGGQSIIQVTENKMVHIIENRDESYESKLE 560

Query: 534 WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSGDVACLDIASV 592
           W  P    I+K  SN  Q+++ALS  E++YFE+     L E++ + E+   +  L I + 
Sbjct: 561 WFPPAGICILKASSNSTQLILALSNNEVVYFEIGSNESLNELQDRIEVEERITALAIGN- 619

Query: 593 PEGRKRSRFLAVGSYDNTIRILSL---DPDDCMQILSVQSVSSPPESLLFLEVQASVGGE 649
                RS ++ + S D+T+++ SL   D  + ++++S+Q + SP  SL      AS GG 
Sbjct: 620 ---GNRSDYMIIASVDSTVKVYSLKVQDQANFLEVVSMQVLVSPASSLQL----ASSGG- 671

Query: 650 DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
                  SL L+ GL +GV  R+ +D  TG+L D R+++LG +P ++
Sbjct: 672 -------SLCLHIGLDSGVYVRSKLDRNTGELFDVRTKYLGTKPVEI 711



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 149/331 (45%), Gaps = 63/331 (19%)

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI---VSINTY 993
            LH T       A+C F  +LL  +   + LY LGKK+LL+K  + L P +I   V+++ +
Sbjct: 959  LHDTVAGSTIHAMCPFHDKLLVPLANAVVLYGLGKKQLLKKSISYL-PTSITKIVALDQW 1017

Query: 994  R-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
               R+ VGDI ES     +   +NQ    ADD   R +T    +D  T+ G D+FGNI+ 
Sbjct: 1018 NGTRVAVGDIHESVTLLHFDERKNQFIPVADDVTKRHVTVVKFVDECTVIGGDRFGNIWL 1077

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV-------QFHVGDVVTSLQK-A 1104
            +RLP +    I+E    G   +      G P+ + E V        F++ D+  S    A
Sbjct: 1078 LRLPLEYDRLIKE----GVDSYLLTLNTGIPSNIRECVFKWQLLNHFYINDIPMSFHLIA 1133

Query: 1105 SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR---------QEHP----- 1150
            S       S++Y  + G++G ++   +R +++FF  LE  MR         QE+      
Sbjct: 1134 SPQMADRASILYAGLQGTIGYLIPLITRREIEFFDLLEQAMRDADHLFYLDQENRLNDTS 1193

Query: 1151 -------------------------------PLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
                                            L GRD M YRS Y PV+ V DGDLCEQF
Sbjct: 1194 ELNDGADEEGSVIDRRFPSVQKKRKIPEGAYSLVGRDAMMYRSYYNPVRHVTDGDLCEQF 1253

Query: 1180 PTLSLDLQRKIADELD-RTPGEILKKLEEIR 1209
              L    +  +A  +D R+  EI +++ ++R
Sbjct: 1254 LELYPSEKNFLAARVDNRSVQEIERRINDMR 1284


>gi|374109159|gb|AEY98065.1| FAFR382Wp [Ashbya gossypii FDAG1]
          Length = 1288

 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 211/707 (29%), Positives = 360/707 (50%), Gaps = 85/707 (12%)

Query: 26  KTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGR 85
           K  +I +A    +EL   E  GR+  L +  +FG I  L+     G  +  ++V  DSG+
Sbjct: 54  KQLQICMATQTQVELYDVE-EGRLRRLFTRTVFGTITGLSSVVADG--RSVLIVVGDSGK 110

Query: 86  IVIL--EYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVL 143
           + +L  +Y   +   + +  E   +SG RR+ P  +++VDP+GR V++ A E+ K+ Y++
Sbjct: 111 MSVLRFKYEGGRVRLEALFNEPLSRSGVRRLSPQAHVSVDPQGRCVLLSAMERNKVCYLM 170

Query: 144 NRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEA 203
           +      L +SSPLEA++ + +       D  FDNPIFA++E+D             ++ 
Sbjct: 171 DV-KQGELQVSSPLEANRPNYVTMQTAACDVAFDNPIFASLEIDL------------ADG 217

Query: 204 QKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVP-----------GGGD--GPSG--- 246
            K L FY LDLGLNH+++    E  D  AN +++VP           GG D   P     
Sbjct: 218 AKYLFFYMLDLGLNHMAKVADFELGDGSANFIMSVPDLEQYGINTKAGGPDDGDPDAIVP 277

Query: 247 -VLVCAENFVIYKN-QGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYG 304
            VL+  +N+V  K+ +G  D+   IP R      +  +I +    + K  FF LLQ+ +G
Sbjct: 278 FVLMGFDNYVSLKDLRGRYDINVQIPTRK---LSQKTIITAGTVQKLKRDFFMLLQSNHG 334

Query: 305 DIFKVTLEHDNEHVSE-LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGAD 363
           D++KV +  D +  S  + I YFDTIP   ++ + K GY+FA SE+GN  LYQF+ +  D
Sbjct: 335 DLYKVKILPDEKTASPVVTISYFDTIPQAQNLHIFKHGYMFANSEYGNSYLYQFENL--D 392

Query: 364 PDVEASSSTLMETEEGFQPVFFQPRG-LKNLVRIEQVESLMPIMDMRIANLFEEEAPQIF 422
            + E+  +++M        +  +PR  LKNL+  +++  + PI+  ++     E  P   
Sbjct: 393 DEEESMLTSVMPGRR----LIIEPRTVLKNLLVADKLALVNPILSSQLT----ERVPLTI 444

Query: 423 TLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLV 482
                G    +R+   G+   ++  S LP  P  +WTV  N    F   + ++   +T++
Sbjct: 445 ATSTLG---DVRLFTAGVNFMDIISSPLPAAPLDIWTVATN-GSRFHKLLFIALQESTMI 500

Query: 483 LSIGE-TVEEVS---DSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----E 533
           L I   TVEE+    +   +    ++ ++ +G  S++QV  + + HI E+   +     E
Sbjct: 501 LKIAAGTVEELELPHNPFVIAQDKTVLIAHMGGQSIIQVTENKMVHIIENRDESYESKLE 560

Query: 534 WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSGDVACLDIASV 592
           W  P    I+K  SN  Q+++ALS  E++YFE+     L E++ + E+   +  L I + 
Sbjct: 561 WFPPAGICILKASSNSTQLILALSNNEVVYFEIGSNESLNELQDRIEVEERITALAIGN- 619

Query: 593 PEGRKRSRFLAVGSYDNTIRILSL---DPDDCMQILSVQSVSSPPESLLFLEVQASVGGE 649
                RS ++ + S D+T+++ SL   D  + ++++S+Q + SP  SL      AS GG 
Sbjct: 620 ---GNRSDYMIIASVDSTVKVYSLKVQDQANFLEVVSMQVLVSPASSLQL----ASSGG- 671

Query: 650 DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
                  SL L+ GL +GV  R+ +D  TG+L D R+++LG +P ++
Sbjct: 672 -------SLCLHIGLDSGVYVRSKLDRNTGELFDVRTKYLGTKPVEI 711



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 149/331 (45%), Gaps = 63/331 (19%)

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI---VSINTY 993
            LH T       A+C F  +LL  +   + LY LGKK+LL+K  + L P +I   V+++ +
Sbjct: 959  LHDTVAGSTIHAMCPFHDKLLVPLANAVVLYGLGKKQLLKKSISYL-PTSITKIVALDQW 1017

Query: 994  R-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
               R+ VGDI ES     +   +NQ    ADD   R +T    +D  T+ G D+FGNI+ 
Sbjct: 1018 NGTRVAVGDIHESVTLLHFDERKNQFIPVADDVTKRHVTVVKFVDECTVIGGDRFGNIWL 1077

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV-------QFHVGDVVTSLQK-A 1104
            +RLP +    I+E    G   +      G P+ + E V        F++ D+  S    A
Sbjct: 1078 LRLPLEYDRLIKE----GVDSYLLTLNTGIPSNIRECVFKWHLLNHFYINDIPMSFHLIA 1133

Query: 1105 SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR---------QEHP----- 1150
            S       S++Y  + G++G ++   +R +++FF  LE  MR         QE+      
Sbjct: 1134 SPQMADRASILYAGLQGTIGYLIPLITRREIEFFDLLEQAMRDADHLFYLDQENRLNDTS 1193

Query: 1151 -------------------------------PLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
                                            L GRD M YRS Y PV+ V DGDLCEQF
Sbjct: 1194 ELNEGADEEGSVIDRRFPSVQKKRKIPEGAYSLVGRDAMMYRSYYNPVRHVTDGDLCEQF 1253

Query: 1180 PTLSLDLQRKIADELD-RTPGEILKKLEEIR 1209
              L    +  +A  +D R+  EI +++ ++R
Sbjct: 1254 LELYPSEKNFLAARVDNRSVQEIERRINDMR 1284


>gi|255712143|ref|XP_002552354.1| KLTH0C02904p [Lachancea thermotolerans]
 gi|238933733|emb|CAR21916.1| KLTH0C02904p [Lachancea thermotolerans CBS 6340]
          Length = 1288

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 220/755 (29%), Positives = 381/755 (50%), Gaps = 109/755 (14%)

Query: 3   LYSLTLQQPTGIIAAINGNFSGTKTPEIVVAR--GKV----------------LELLRPE 44
           LY LTLQ+ +  + +  G+F   K  ++V AR  GK                 +EL   E
Sbjct: 10  LYHLTLQRQSNFVHSCVGHFVDYKHHQLVRARDAGKRRKGRRDYQVCAATETHIELYDVE 69

Query: 45  NSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH-- 102
           + G ++ LVS   F  I ++    +  S   ++V+ +D+G + +L++  +   F ++H  
Sbjct: 70  D-GSLKRLVSIPFFATITAMQSLPIDSSYS-FVVLLTDAGNLSVLQFVYNSGCF-RLHTL 126

Query: 103 -QETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLN-RDTAARLTISSPLEAH 160
             E F +SG RR+ P ++L+VD  GR + + A E+ KL ++ + +D A  L+ISSPL  +
Sbjct: 127 LNEPFARSGIRRLSPQKHLSVDLHGRCIFLSATERNKLCFLTDFKDNA--LSISSPLVLN 184

Query: 161 KSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVS 220
           K ++I  S    D  FDNP+FA++E+D             S+  K+L FY LDLGLNHV 
Sbjct: 185 KPNSITLSTAVCDVAFDNPVFASLEID------------MSDGSKSLIFYVLDLGLNHVV 232

Query: 221 RKWSEPVDNGANMLVTVPG------GGDGPSG-----------VLVCAENFVIYKN-QGH 262
           ++    +   AN +++VP          GP G           VL+  ++ ++ K+  G 
Sbjct: 233 QRSEHELPRDANFVISVPNLEKYGISTKGPEGSQDGDDLVNPFVLIGLQDRLLLKDSHGL 292

Query: 263 PDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTL--EHDNEHVSE 320
             +   +P R +  +    +I++A  H+ K  FF LLQT  GD+FKV +          +
Sbjct: 293 YSLEVQLPTRENEASP--TIIITATLHKLKKEFFILLQTNTGDLFKVKIIPNETTRSSPK 350

Query: 321 LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGF 380
           L + +FDTIP ++ + + ++G + A  EF   +LY+F+ +G D D     S+++ +++  
Sbjct: 351 LTVTFFDTIPCSSGLHIFRNGLMLALGEFVALSLYEFEGLGNDEDF----SSILTSDDPQ 406

Query: 381 QPVFFQP-RGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
           + +  +P   L+NL  ++Q     P++  ++            T+  +  +++L  L  G
Sbjct: 407 RKLKLRPVEELQNLSLLDQFRGSNPVLSQKVV------GTTPLTILSQ-QKNTLETLTTG 459

Query: 440 LAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIV-VSFNNATLVLSIG----ETVEEVSD 494
           +  SE+  S LP  P  VWT+K  +  E    +V +S   AT+VL I     E +E  S+
Sbjct: 460 VNFSELISSPLPPNPDNVWTIK--LPSELGHRLVFLSLPKATMVLKIEDGSLEELENASE 517

Query: 495 SGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI---REDGRIN---EWRTPGKRTIVKVGSN 548
           S   +   ++ V L+G+ S++QV  + +  I   ++   +N   EW  P    IV+   +
Sbjct: 518 SFKTENDRTIFVGLMGESSIIQVCENSLSQIALAKKPPVLNSKLEWLPPAGIKIVEATCS 577

Query: 549 RLQVVIALSGGELIYFEVDMT--GQLLE--VEKHEMSGDVACLDIASVPEGRKRSRFLAV 604
             Q+ + LS  E+++FE+D +  G++L    ++ EM   +  L   S+P+  K S FLAV
Sbjct: 578 STQLALGLSNNEIVWFELDTSNGGEVLNEYQDRVEMPDKITAL---SLPQTFK-SDFLAV 633

Query: 605 GSYDNTIRILSLDP---DDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLN 661
           G  D++++I+ L     D  +++LS+Q V SPP  L  +  +              LFL+
Sbjct: 634 GCQDSSVKIIGLKSTSRDSFLEVLSMQVVLSPPSDLKLVYSK------------GLLFLH 681

Query: 662 AGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            GL  GV  R+ +D   GQL D R+++LG +P K+
Sbjct: 682 LGLDAGVYIRSNIDKTDGQLFDIRTKYLGSKPVKV 716



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 135/306 (44%), Gaps = 57/306 (18%)

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNT--IVSI 990
            +L  LH T VE    ++  F+ +LL  +   L LY LG+ +LL+K    + P+   + SI
Sbjct: 952  NLTFLHDTAVEEKVYSMIAFKDKLLISLFGNLVLYGLGRSQLLKKTITPMPPSVTKVTSI 1011

Query: 991  NTYRD-RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGN 1049
              + D R+ VGDI ES     Y +  ++    ADD   R +TA   +D  T+ G D+FGN
Sbjct: 1012 AQWEDSRVAVGDIHESVTLFLYDKRADRFISIADDITKRHVTALEFLDRSTVVGGDRFGN 1071

Query: 1050 IYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA--------PNKMEEIVQFHVGDVVTSL 1101
            I+ +RLP  + + +  D     +      +N +        P K + +  F+  D+  SL
Sbjct: 1072 IWVLRLPS-IHERLVSDEFPFFLSKFHNNVNNSIAKNIMECPFKWDLVNHFYANDIPVSL 1130

Query: 1102 QKASLVPGGGE-SVIYGTVMGSLGAMLAFSSRDDVDFFSHLE------------------ 1142
                 +    + S++Y  + GS+G +L  +++ + +F   L+                  
Sbjct: 1131 NVVKNMHSSDKVSILYLGLQGSVGCLLPLATKKEAEFLEKLQGGLSEADEAFYMDFEAQK 1190

Query: 1143 ------------------MHMRQEHP--------PLCGRDHMAYRSAYFPVKDVIDGDLC 1176
                                ++ + P         L GRDH  YRS Y PV+ VIDGDLC
Sbjct: 1191 ASEESEHTDDWSMDYNQGTKLKHKSPRPIVEGAFSLVGRDHTVYRSYYAPVRKVIDGDLC 1250

Query: 1177 EQFPTL 1182
            EQF  L
Sbjct: 1251 EQFYQL 1256


>gi|397615212|gb|EJK63291.1| hypothetical protein THAOC_16062, partial [Thalassiosira oceanica]
          Length = 322

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 212/321 (66%), Gaps = 10/321 (3%)

Query: 899  TLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE------GIPLALCQF 952
            +LLAVGT  G+   P R+  + ++ +YR V  G+ L+LLH+T+V+      G  LAL  F
Sbjct: 6    SLLAVGTVTGMTMNPLRHKES-HVVLYRVVS-GERLQLLHRTKVDDGSSGGGPVLALVHF 63

Query: 953  QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            QGRLL GIG  LRLY++GK++LL+KCE +  P  + ++    DR +VGD+ +S  F +Y 
Sbjct: 64   QGRLLVGIGKSLRLYEMGKRQLLKKCELRGLPTMVKTLQAAGDRAFVGDMMQSMQFVRYD 123

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
               N+L + A D   R +T    +D +T+A  DKFGN+  +RLP+  +D    D +G + 
Sbjct: 124  ATANRLVLVARDRSARPITCQELLDVNTVAVGDKFGNVTTLRLPRG-ADTGAVDVSGTRA 182

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSR 1132
             W+  + +  P K+E +  +HVG+VVTSL +ASLV GG ES+IY TV G +GA++ F+SR
Sbjct: 183  LWDSSREDATP-KLETLCTYHVGEVVTSLTRASLVAGGAESLIYVTVTGRIGALVPFTSR 241

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIAD 1192
            +DV+F++ LE H+R E P   GRD  +YRS Y PVK VIDGDLCE +  L  + + +IAD
Sbjct: 242  EDVEFYTSLESHVRSEVPRPTGRDPQSYRSFYCPVKHVIDGDLCEAYGGLPYEARERIAD 301

Query: 1193 ELDRTPGEILKKLEEIRNKIV 1213
            +++R+ GE++KKLE+ +N+++
Sbjct: 302  QMERSTGEVMKKLEDTKNQLM 322


>gi|384250802|gb|EIE24281.1| hypothetical protein COCSUDRAFT_28729 [Coccomyxa subellipsoidea
            C-169]
          Length = 1101

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 298/1242 (23%), Positives = 527/1242 (42%), Gaps = 189/1242 (15%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFG 59
            + Y +T  +PT +  +I GNF+      +++++   +E+  L PE    ++ +    I+G
Sbjct: 9    FNYVVTAHKPTSVTQSIVGNFTSPTDINLIISKCTRIEIHTLTPEG---LKGVADVAIYG 65

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQ 118
             + ++  FR  G  KD + + ++  +  +LEY+  +  +  + + +   + G R    GQ
Sbjct: 66   RVATMELFRPVGESKDLLFLSTERYKFCVLEYDSETGELVTRANGDIEDQVG-RPCDNGQ 124

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               VDP  R  MIG      L  V+  D   +L  +  +   + + I         G   
Sbjct: 125  IGIVDPGCR--MIGLHLYDGLFKVIPIDDKGQLHEAFNMRIDELNVIDMIFLE---GCAK 179

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTV 237
            P  A +  D  +A    T +   + +K+LT              W +  +D GA+ ++ V
Sbjct: 180  PTIAVLYQDNKDARHIKTYEVVLK-EKDLT-----------EGPWRQSNLDAGASRVIAV 227

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
            P   +   G LV  E+ + Y  QG        P +A         I+ A     +    +
Sbjct: 228  P---EPLGGALVVGESVIAYMGQGQ--AMKCTPIKA--------TIIRAHGRVDEDGSRY 274

Query: 298  LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            LL    G+++ + L+HD EHV+ LK++        +++  L +G +F  S  G+  L + 
Sbjct: 275  LLGDYVGNLYLLVLQHDGEHVAGLKVEPLGRTSAPSTLTYLDNGVVFVGSSGGDSQLVR- 333

Query: 358  QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI-EQVESLMPIMDMRIANLFEE 416
                                    P    P+   N V + E + +L PI+D  + +L  +
Sbjct: 334  ----------------------LHPTPVTPQEPSNFVEVLETMTNLGPIIDFVVVDLERQ 371

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+    G     SLRI+R G+ + E A  +LPG+   +W ++ +  D FD ++V+SF
Sbjct: 372  GQGQVVMCSGIMADGSLRIVRNGIGMIEQATVELPGI-KGMWALRASHMDAFDTFLVISF 430

Query: 477  NNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
               T +L+I   + ++E    GF     +L       D L+QV  + +R +    R   +
Sbjct: 431  VGETRILAINADDELDEAELPGFSADAQTLCCGNTVSDHLVQVAGADVRLVDASTRQLTH 490

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-EMSGDVACLDIAS 591
            +WR P    I     +  Q   + + G L+Y E+  +G  +E + H ++  +VAC+DI+ 
Sbjct: 491  QWRPPAGLNINVASVSPTQASPSTAHGNLVYLELGESG--IEQKGHVKLDAEVACVDISP 548

Query: 592  VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP------PESLLFLEVQAS 645
            + E  + +  LAVG++D  + I SL     M  L    VS P      P S+LF      
Sbjct: 549  LSEDGEAASLLAVGTWDMRVHIFSL---PAMAPL----VSEPLGGEIIPRSVLF------ 595

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
                  A      +L   + +G L+   VD  TG L+D +   LG +P  L S    G++
Sbjct: 596  ------AAFEGVPYLLCAMGDGQLYNFHVDEATGALADRKKICLGTKPIMLRSFRSNGQS 649

Query: 706  AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
             +   S RP + Y    + L + ++   + +  SF+S    + +      A+ + +I+++
Sbjct: 650  HVFAASDRPTVIYSANKKLLYSNVNENEVNFMTSFNSSSFPDSLALAKEGAMTIGSIDQI 709

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
             +  +   +PL   PRR   Q   +  +++ +                         NG 
Sbjct: 710  -QKLHIRTVPLGEQPRRLAHQEASRSFLVLTSPN-----------------------NGA 745

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
              MD                          D     +R+LD ++  T     L+ NE   
Sbjct: 746  TGMD--------------------------DAGPDSVRLLDDQTFETLDRFGLETNEVCC 779

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            +  +++F D +      VGTA  +   P+     G I +  F  +G  L L+ + +V+G 
Sbjct: 780  AAASMSFSD-DPCPYYVVGTAITVAEEPEPT--KGRILV--FGAKGGKLSLVCEKEVKGA 834

Query: 946  PLALCQFQGRLLAGIGPVLRLYDL-----GKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
               L  FQG+L+AGI   ++L+       G + L  +C + +     + I T  D + VG
Sbjct: 835  AYNLHPFQGKLIAGINSRVQLFKWTQSEDGSRELTNECSH-VGHVLALYIVTRGDFVIVG 893

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+  S     YR DE  L + A D    W+TA   +D DT  GA+   NI+ +R   D +
Sbjct: 894  DLMRSLQLLIYRADEGILEVRARDYKTHWMTAVEVLDDDTYLGAENSNNIFTLRKNTDAA 953

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES------- 1113
               +ED                 N++E + Q+H+G  V   +  SLV    +S       
Sbjct: 954  --ADED----------------RNRLETVGQYHLGVFVNRFRHGSLVMKLPDSEAAKIPT 995

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVK 1168
            V++ T+ GS+G ++A   +    F S L+  +R+    + G  H+A+R+        P +
Sbjct: 996  VLFVTINGSIG-VIASLPQQQFQFLSRLQDCLRKVIKGVGGLSHVAWRTFQDEHTKMPSQ 1054

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDR--TPGEILKKLEEI 1208
            + +DGDL EQF  L  D   ++A E+    T  ++L+ +EE+
Sbjct: 1055 NFVDGDLIEQFLDLKRDSMERVAREMGEGVTSEDLLRMVEEL 1096


>gi|397627714|gb|EJK68584.1| hypothetical protein THAOC_10223, partial [Thalassiosira oceanica]
          Length = 456

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 212/321 (66%), Gaps = 10/321 (3%)

Query: 899  TLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE------GIPLALCQF 952
            +LLAVGT  G+   P R+  + ++ +YR V  G+ L+LLH+T+V+      G  LAL  F
Sbjct: 140  SLLAVGTVTGMTMNPLRHKES-HVVLYRVVS-GERLQLLHRTKVDDGSSGGGPVLALVHF 197

Query: 953  QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            QGRLL GIG  LRLY++GK++LL+KCE +  P  + ++    DR +VGD+ +S  F +Y 
Sbjct: 198  QGRLLVGIGKSLRLYEMGKRQLLKKCELRGLPTMVKTLQAAGDRAFVGDMMQSMQFVRYD 257

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
               N+L + A D   R +T    +D +T+A  DKFGN+  +RLP+  +D    D +G + 
Sbjct: 258  ATANRLVLVARDRSARPITCQELLDVNTVAVGDKFGNVTTLRLPRG-ADTGAVDVSGTRA 316

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSR 1132
             W+  + +  P K+E +  +HVG+VVTSL +ASLV GG ES+IY TV G +GA++ F+SR
Sbjct: 317  LWDSSREDATP-KLETLCTYHVGEVVTSLTRASLVAGGAESLIYVTVTGRIGALVPFTSR 375

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIAD 1192
            +DV+F++ LE H+R E P   GRD  +YRS Y PVK VIDGDLCE +  L  + + +IAD
Sbjct: 376  EDVEFYTSLESHVRSEVPRPTGRDPQSYRSFYCPVKHVIDGDLCEAYGGLPYEARERIAD 435

Query: 1193 ELDRTPGEILKKLEEIRNKIV 1213
            +++R+ GE++KKLE+ +N+++
Sbjct: 436  QMERSTGEVMKKLEDTKNQLM 456


>gi|363750540|ref|XP_003645487.1| hypothetical protein Ecym_3168 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356889121|gb|AET38670.1| Hypothetical protein Ecym_3168 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 1295

 Score =  272 bits (695), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 244/866 (28%), Positives = 409/866 (47%), Gaps = 150/866 (17%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIV-----------------------VARGKV 37
           +YLY LTLQ+ +  + +  G+F   K  ++V                       +A    
Sbjct: 6   LYLYHLTLQKQSNYVNSCIGHFVSYKQHQLVAESKSVQDGGRKRAKARKALQLCIATQTH 65

Query: 38  LELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILE--YNPSK 95
           LEL   E  G +  ++   +F  I  L    L    + ++++ SDSG + I    Y   K
Sbjct: 66  LELYDVE-EGTLYCVMRQPMFATI--LCMETLVVENRTFLILVSDSGNLTICNFVYRDGK 122

Query: 96  NVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISS 155
              + +  E  G+SG RR+ P  YL+V+P+GR +M+ A E+ K+ Y+++      L +SS
Sbjct: 123 CRLETLSNEPMGRSGVRRLSPQTYLSVNPQGRCLMLSAMERNKVCYLIDF-RGDELQVSS 181

Query: 156 PLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLG 215
           PLEA++ + +       D GFDNP+FA++E+D              +  + L FY LDLG
Sbjct: 182 PLEANRPNFVTIQTVCCDVGFDNPLFASLEID------------LVDKSRYLFFYMLDLG 229

Query: 216 LNHVSRKWSEPV--DNGANMLVTVPGGGDGPSG-------------------VLVCAENF 254
           L HV+ K SE V  D+ A+ +V VP     P G                   V+VC EN+
Sbjct: 230 LKHVA-KLSEYVLHDSTASFIVAVPNL--EPYGIVTKQNTYDEGNTDEIIPFVIVCFENY 286

Query: 255 VIYKN-QGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEH 313
           +  ++  G  D+   IP R D  A+R  LI +   H+ +  FF LLQ+ YGD++KV +  
Sbjct: 287 ISLRDLNGMYDINVQIPTRRD--AQR-TLITACTVHKLRNDFFVLLQSNYGDLYKVRILP 343

Query: 314 DNEHVS-ELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
           DN+  S  + I YFDTIP      + K+GY+F+ SE GN  LY F+ +G     E+  +T
Sbjct: 344 DNKDKSPTMLISYFDTIPHAEKFHIFKNGYMFSNSELGNSYLYLFENLGE----ESEQNT 399

Query: 373 LMETEEGFQPVFFQPRG-LKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRS 431
           L     G + +  +P   L+NL   ++++ + P+    ++    E  P        G   
Sbjct: 400 LTSHMPG-KRLLIEPHDELENLSVADKLDLINPVTSSHVS----EAVPLTVITKTLG--- 451

Query: 432 SLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGE-TVE 490
           + + L+ G+ + E+  S+LP  P  +WT   N N +F   + ++   +T++L I + TVE
Sbjct: 452 ATKTLKAGIELEEIISSRLPSTPLDIWTTALN-NSKFHRLLFLALPKSTMILKIADGTVE 510

Query: 491 EVS---DSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE---DGRIN--EWRTPGKRTI 542
           E+    +   L    +L +  +G  S++QV  + +  +     D  I+  EW  P    I
Sbjct: 511 ELELEMNPFSLSEDRTLLIGSMGAQSIIQVCENKLIQVAALSGDKYISKLEWFPPAGIRI 570

Query: 543 VKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE-KHEMSGDVACLDIASVPEGRKRSRF 601
           +    +  Q+V+ALS  E++YFE+     L E++ + E+   +  L +A+      RS +
Sbjct: 571 LDATCSNTQLVLALSNNEIVYFEIGTNDSLNELQDRIELEDTINGLSVAN----GMRSNY 626

Query: 602 LAVGSYDNTIRILSLDPDD---CMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
           L V   D ++++ SL  DD     +++S+Q+++S   S+        V   D      SL
Sbjct: 627 LVVVCGDTSVKVYSLKMDDQNNFFEVVSMQALTSSANSIKL------VSSND------SL 674

Query: 659 FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP------PKLFSVVV----------- 701
            L+ GL +GV  R+ +D   GQL D R+++LG +P      P++F  +            
Sbjct: 675 CLHIGLASGVYVRSRLDKHDGQLFDVRTKYLGSKPVDISFLPQMFPFISDEEEEDEEEEE 734

Query: 702 ----------GGRAAMLCL---SSRPWLGYIHRGRFLLTPL---SYETLEYAASFSSDQC 745
                        A + C+   S++ W+ Y      L+ PL     ++L+  A F+S++ 
Sbjct: 735 NNDKDRISSGTNTATLSCVILHSNKTWVSYELDSVRLVRPLILARSQSLKKVAPFTSNEI 794

Query: 746 -VEGVVSVAGNALRVFTIERLGETFN 770
            + G  S++     V  I RLG+ FN
Sbjct: 795 KLNGFCSISSAGTLV--IGRLGK-FN 817



 Score =  119 bits (299), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 137/297 (46%), Gaps = 51/297 (17%)

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNT--IVSINTYR 994
            +H T ++    A+  F  ++L  I   L LY +GKKRLL+K    + P+   +VS++ ++
Sbjct: 966  VHDTPIDEQVHAMVAFGDKILVPISNALVLYGMGKKRLLKKSITLMPPSITKVVSLDQWK 1025

Query: 995  D-RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
              RI VGDI ES     + + +N     ADD+V R +T    +D  T+ G D+F NI+ +
Sbjct: 1026 SQRIAVGDIHESVTLFHFDKPKNMFIPVADDTVKRHVTTLRFLDECTVIGGDRFSNIWVL 1085

Query: 1054 RLPQDVSDEIEEDPTGG---KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG 1110
            RLP      I+ED  G     +      +     K + +  F++ D+  SLQ  S     
Sbjct: 1086 RLPLQCDKLIKEDFEGHLQVAVSHISKNIKECNFKWKLLNHFYLNDIPISLQTVSSAQFS 1145

Query: 1111 GES-VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR----------------------- 1146
              + +IY  + G++G ++   +R +V+ F  +E  MR                       
Sbjct: 1146 DRTNIIYTGLQGTVGCIIPLITRREVELFESVEQVMRDADYLFYLEQEERFSVAAVDIDE 1205

Query: 1147 ----------------QEHPP-----LCGRDHMAYRSAYFPVKDVIDGDLCEQFPTL 1182
                            ++H P       GRD ++YRS Y PV+ VIDGDLCE+F TL
Sbjct: 1206 YEESLGANDTYLRKKQKKHVPEGAYSTVGRDILSYRSYYNPVRHVIDGDLCERFFTL 1262


>gi|147793838|emb|CAN71167.1| hypothetical protein VITISV_038358 [Vitis vinifera]
          Length = 289

 Score =  266 bits (680), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 156/277 (56%), Positives = 169/277 (61%), Gaps = 73/277 (26%)

Query: 541 TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
           T VKVG NRLQVVIALS GELIYFEVDMT QL+EVEK+EMSGDVAC DIA VP+GR RSR
Sbjct: 2   TTVKVGPNRLQVVIALSKGELIYFEVDMTSQLMEVEKYEMSGDVACSDIAPVPKGRXRSR 61

Query: 601 FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
           FL VGS D TI ILSLDPDD MQILS+QSVS PPESL                   S F 
Sbjct: 62  FLTVGSXDYTIHILSLDPDDYMQILSMQSVSFPPESL-------------------SQFR 102

Query: 661 NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
           +         R VVDM TGQLSD+RSR LGLR PK F V+                    
Sbjct: 103 HX--------RIVVDMATGQLSDARSRSLGLRAPKPFYVI-------------------- 134

Query: 721 RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
                       TLE+AASFS D C EGVV++AG+ALRVFTIERLG TFNET +P R TP
Sbjct: 135 ------------TLEFAASFSFDXCAEGVVAIAGDALRVFTIERLGXTFNETMIPSRXTP 182

Query: 781 RRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
           RR +              QG    EERE AKKECFEA
Sbjct: 183 RRVI--------------QGGFAMEEREVAKKECFEA 205


>gi|444319478|ref|XP_004180396.1| hypothetical protein TBLA_0D03780 [Tetrapisispora blattae CBS 6284]
 gi|387513438|emb|CCH60877.1| hypothetical protein TBLA_0D03780 [Tetrapisispora blattae CBS 6284]
          Length = 1330

 Score =  266 bits (679), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 205/756 (27%), Positives = 368/756 (48%), Gaps = 108/756 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPEN--------------- 45
           + LY+LTLQ+P+  I    G F   KTP ++ A     E+ +P+                
Sbjct: 9   LNLYNLTLQRPSNYIHLCAGYFID-KTPTLLSATTADSEIKKPKKRKLLQFVLATETHLE 67

Query: 46  -----SGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN--VF 98
                 G+++ L    IFG I ++  F + GS   ++ +GSDSG + IL +  S N    
Sbjct: 68  LYDIEDGKLQKLAVIPIFGIITTMKSFSIEGSNYYFLAMGSDSGNLTILRFIHSSNGIKL 127

Query: 99  DKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLE 158
           + +  +   +SG RRI P  Y++VDP+GR +++GA EK K+ ++L+        IS PLE
Sbjct: 128 ETLINQPLTRSGARRISPISYISVDPQGRCLLLGAVEKNKMCFLLDY-KYDNFQISPPLE 186

Query: 159 AHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNH 218
            ++   I  S+   D  FDNP F ++ELD +    D            L +Y LDLGLN 
Sbjct: 187 IYRPDKITLSLVSCDVQFDNPCFVSLELDSNGVKNDIY----------LVYYVLDLGLNS 236

Query: 219 VSRKWSEPVDNGANMLVTVP----------------GGGDGPSG------VLVCAENFVI 256
           + ++ +  ++  AN ++ +P                G GD          VL+  EN ++
Sbjct: 237 IIKRANYKLNAAANFIMPLPDLSKYNISTTLNLNDKGHGDSSESNEVNPFVLIGLENHIL 296

Query: 257 YKN-QGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHD- 314
            K+ +G+  ++  IP+  +L     + I+S A    K  F  +LQ+  GD++KV +E + 
Sbjct: 297 LKDMRGYFSLKVQIPKPENL--RTPITIISYAIQELKKDFLVILQSNQGDLYKVKIEPNL 354

Query: 315 -NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTL 373
            + +  +L I YFDTI     + + K+G+LF  SE+ ++ L QF  +G D     SSS +
Sbjct: 355 TDRNRPQLSITYFDTINQAEQIHIFKNGFLFVNSEYSDNYLLQFIDLGDD----ISSSQI 410

Query: 374 METEEGFQPV-FFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSS 432
           + +    Q + F +   L++ + +++  +L P+ +  +A    E  P   T       +S
Sbjct: 411 LTSSNSQQTLDFMRNSKLEHFIIVDKQCTLNPLTNAVVA----ETLPLTIT---TKKEAS 463

Query: 433 LRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT-LVLSIGETVEE 491
           LR+L   +    +  + LP     +W++K    D     + +SF N++ ++++   ++EE
Sbjct: 464 LRMLSNSVNFKSLISAPLPSGAKNLWSIKL-PEDAHHKLLFLSFQNSSKILITDNNSIEE 522

Query: 492 VS---DSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI--REDGRINE----WRTPGKRTI 542
           ++   +   LD   +L V  IG  S++Q+  + ++ I  + D +  E    W  P    I
Sbjct: 523 LNIKKNPFILDNDSTLHVCSIGHASIVQISENEMKQITYKNDSKSFESKLDWLPPAGIKI 582

Query: 543 VKVGSNRLQVVIALSGGELIYFEVDM-----TGQLLEVEKH-EMSGDVACLDIASVPEGR 596
           V+  + + Q+ +ALS  E++YFE++      +  + E++ H EM+  +  + + +     
Sbjct: 583 VRATNTKTQLALALSNNEIVYFEINTETSSNSDTMHELQLHIEMTSSILSMSMGT----G 638

Query: 597 KRSRFLAVGSYDNTIRILSLD--PDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
             S FLAVG  D+ + I+SL    D+ ++I+S+QS+ S P  L+ L  +  +        
Sbjct: 639 MSSDFLAVGCDDSVVSIISLKKLSDEFLEIVSIQSLLSSPTDLVLLHFKGKIQ------- 691

Query: 655 PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLG 690
                L+ G +NGV  R+ ++   GQ+ D + ++LG
Sbjct: 692 -----LHIGQENGVYVRSSINPTNGQIFDVKLKYLG 722



 Score = 98.2 bits (243), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 155/361 (42%), Gaps = 68/361 (18%)

Query: 918  VAGYIHIYRFVEEGK--SLELLHKTQV--EGIPLALCQFQGRLLAGIGPVLRLYDLGKKR 973
            + G IH +      K  S  L+ K++V  +     +  F+ +LL  I   L +Y L KK 
Sbjct: 973  INGRIHTFELNVNLKKASFNLIKKSEVTVDDNVHTMAVFRDKLLVPIFGKLAVYKLEKKH 1032

Query: 974  LLRKCENKLFPNT--IVSINTYRD-RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWL 1030
            L+ K    + P+   I S+  +++ R+ +GDI+ES     Y       +  ADD   R +
Sbjct: 1033 LILKNTIDMPPSVTKITSMAVWKNQRVAIGDIRESVTLLIYNDSLETFFAVADDVTKRHV 1092

Query: 1031 TAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE-----EDP---TGGKIKWEQGKLNGA 1082
            T    +D  ++ G DKFGNI+ +RL Q  +++++      DP      K++     +   
Sbjct: 1093 TTLQFLDKSSIIGGDKFGNIWTLRLSQADNNKLDGTVDLADPRFKQRTKLQERFPNILEC 1152

Query: 1083 PNKMEEIVQFHVGDVVTSLQKASLVPGGGES----VIYGTVMGSLGAMLAFSSRDDVDFF 1138
            P K E    F + D+V    K  ++P    S    ++Y  + G++G+++   S   +   
Sbjct: 1153 PFKFELKTHFFINDIV---MKIEIIPNVNNSNRSTIMYMGLQGTIGSLIPIISSPQLKML 1209

Query: 1139 SHLE---------MHMRQEHPP------------------------------------LC 1153
            + +E         M+ R+E                                       L 
Sbjct: 1210 NSIEGMMRNADNKMYKRKEFDKEIESKNIIEDDDDYIYGDIIGSQEQRIDKVVEGAVTLI 1269

Query: 1154 GRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELD-RTPGEILKKLEEIRNKI 1212
            GRD ++YR  Y PV++VIDGD CE+F  L  + Q  I D+ +     +IL  L E+R+  
Sbjct: 1270 GRDQVSYRGYYAPVRNVIDGDFCEEFLNLRSNEQEIICDDSNGLNVLDILDYLNEMRHSF 1329

Query: 1213 V 1213
            +
Sbjct: 1330 L 1330


>gi|428164905|gb|EKX33915.1| hypothetical protein GUITHDRAFT_158867 [Guillardia theta CCMP2712]
          Length = 1092

 Score =  266 bits (679), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 293/1245 (23%), Positives = 530/1245 (42%), Gaps = 193/1245 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGK--VLELLRPENSGRIETLVSTEIF 58
            M+ Y +T  + +    ++ G+F+G K   ++VA+G   V+  L PE    ++ ++ T I+
Sbjct: 1    MHCYVVTAHRASCAQLSVRGSFTGPKDTNLIVAKGSRLVIYTLTPEG---LQPVLDTGIY 57

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
            G I ++  + + G++++ + + ++  +  I+EY+ S              S  R +  G 
Sbjct: 58   GRIAAIELYTVAGAERESLYILTERLKFCIVEYDSSTGELITKAMGDVQDSVGRPVDGGP 117

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVL---NRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
               +DP+ R  MIG      L  V+    R+   R   +  LE  +   + +       G
Sbjct: 118  IAHIDPERR--MIGFLLYDGLFKVIPIDTRNGQLREAFNIRLEELQVLDVQFLY-----G 170

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANML 234
            +  P    +  D  E     T Q +   +            + ++  WS+  V+ GA M+
Sbjct: 171  YAQPTIVLLYQDPKEMRHLKTYQVSIRDK------------DFIAGPWSQTGVEIGATMI 218

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            + VP       G ++  E  + Y N    D + +     D+   R    +     R    
Sbjct: 219  IPVP---TPIGGCILLGEQTISYLNGDKGDTKTI---HMDMTVIRAWGKIDEDGRR---- 268

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
              +LL    G ++ + LE D   V  LK+          ++  L SG +F  S FG+  L
Sbjct: 269  --YLLGDHLGQLYVLVLEFDGNKVLGLKLDTLGETSSAKTITYLDSGVVFIGSCFGDSQL 326

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
             +       PD + + S                    N+  +E   +L PI D  + +L 
Sbjct: 327  IRLH-----PDKDENDS--------------------NIEVLESFTNLGPIQDFCVVDLE 361

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
             +   Q+ T  G     SLR++R G+ ++E A  +LPG+   +W+++++++ ++D Y++ 
Sbjct: 362  RQGQGQVVTCSGTLKDGSLRVVRNGIGINEQAAVELPGI-KGLWSLRESIDAQYDKYLIQ 420

Query: 475  SFNNATLVLSIG-ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--I 531
            SF N T VL I  E + E    GF     ++  S +  D L+Q+    +R +    +  +
Sbjct: 421  SFVNETRVLEIADEELSETEIDGFDHNAQTIFCSNVLGDCLLQITEVSLRLVSTKSKQLL 480

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIAS 591
             EW  P    I   G N  QVV+      LIY +V   G + EV++ EM  ++ACL++  
Sbjct: 481  KEWFPPNGERITVAGGNVQQVVLTSGKRTLIYLDVS-NGDVTEVKRIEMDQEIACLNLNP 539

Query: 592  VPE--GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQASVG 647
            + E     +S F+AVG ++ ++ +L L     M+++  +S+   + P SLL + ++    
Sbjct: 540  LGEKSDHNKSDFVAVGHWNLSLSMLRLPS---MEVVCTESIGGDAIPRSLLLVTLE---- 592

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
               G D     +L   L +G LF   +D  T Q+ + +   LG  P  L   +  G   +
Sbjct: 593  ---GVD-----YLLCALGDGYLFTFAIDASTAQIGERKKISLGTHPMILSKFMSRGATHV 644

Query: 708  LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGE 767
               S RP + Y +  + L + ++ + +   A F+S+   + +      +LR+  I+ + +
Sbjct: 645  FAASDRPTVIYSNNRKLLFSNVNLKEVTQMAPFNSEGFPDSLAIATETSLRIGVIDDIQK 704

Query: 768  TFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGN 827
                T   LR  PRR   Q                     E++K  C     +  N +G 
Sbjct: 705  LHIRTVY-LREQPRRICHQ---------------------ESSKTFCVATLSIRINRDGE 742

Query: 828  MDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
                   + E ++  L D+Q                +LD          +LQ+ E   S+
Sbjct: 743  -------EVEEQFIKLFDDQ-------------TFEILDT--------YQLQEFENTCSV 774

Query: 888  CTVNFHDKEHGTLLAVGTAKGL--QFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
               +F D +      VGTA  +  +  PK     G + ++  ++  + L L    +++G 
Sbjct: 775  ECASFSD-DPTLYYIVGTATAVPQESEPKE----GRLLVFEVID--RKLHLKASKEIKGA 827

Query: 946  PLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            P  +  F G+LLAGI   + L+     D G   L+ +C ++     ++ + T  D I  G
Sbjct: 828  PYQIKPFNGKLLAGINSKIELFRLSDSDTGHMELVSECCHRGHI-LVLYLQTRGDFIVAG 886

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+  S     Y++ + Q+   A D    W+TA   +D DT  GA+ + N++ VR   D +
Sbjct: 887  DLMRSISLLTYKQVDGQIEEIARDFNANWMTAVDILDDDTFLGAEGYFNLFTVRKNTDAT 946

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGG-----ESVI 1115
             + E                    ++E + ++H+GD+V   Q+ SLV         +++I
Sbjct: 947  SDEER------------------ARLEVVGEYHLGDMVNRFQRGSLVLRSSDTPTTDTII 988

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS--------AYFPV 1167
            +GTV G +G ++A  S+++ +F   ++  +      + G  H  +RS        A  P 
Sbjct: 989  FGTVNGMIG-VIAVLSKEEYEFLLKVQDALNFVIKGVGGLRHEDWRSFENERTQGARAP- 1046

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
            K  IDGDL E F    LDL+R+  +E+    G I   +EE+  KI
Sbjct: 1047 KGFIDGDLIESF----LDLRREKMEEVCHAIGSI--TVEELSRKI 1085


>gi|156841606|ref|XP_001644175.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114812|gb|EDO16317.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 1346

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 220/823 (26%), Positives = 388/823 (47%), Gaps = 142/823 (17%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF-------SGTKTPEIV--VARGKVLEL----------- 40
           ++LY+LTLQ+ +  + +  GNF         +K  +++  V + KV EL           
Sbjct: 9   IFLYNLTLQKQSNYVHSCIGNFIDINSDIDSSKELKLMQDVKKKKVKELQLCIATETHIE 68

Query: 41  LRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK 100
           L   + G +   ++  IF  I ++  F +  +   ++ + SDSG + I  +     +  K
Sbjct: 69  LYDVSEGTLNLCITIPIFATITAMDSFVIPKAPYSFLAITSDSGVLTIARFIRESGII-K 127

Query: 101 IH---QETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPL 157
           +     E   ++G RR+ P  YL ++P GR +M+ A E+ KL ++L+ +   ++ ISSPL
Sbjct: 128 LKTDLNEPLSRTGLRRLSPISYLNIEPYGRCLMVSAMERSKLCFLLDYEDN-KIKISSPL 186

Query: 158 EAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLN 217
           E ++S  I+      D  +DNP FA IE+D S  +             +L FY LDLGLN
Sbjct: 187 EINRSGMIMMGGTSCDVRYDNPCFATIEIDTSRNND-----------FHLVFYVLDLGLN 235

Query: 218 HVSRKWSEPVDNGANMLVTVP----------------GGGDGPSG----VLVCAENFVIY 257
           H+ +K    +  GAN ++++P                G GD        VL+  E F++ 
Sbjct: 236 HIIKKSDYKIRKGANYIMSLPELSKYNIRTKINDQHSGIGDLDDDINPFVLLGYEGFILI 295

Query: 258 KNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL---FFFLLQTEYGDIFKVTL--E 312
           K     D+R     +  +P   G        H  +TL   FF LLQ+ YGD+FK+T+  +
Sbjct: 296 K-----DLRGNYSLKVQIPKSGGQFSTKIIAHSIQTLKKEFFILLQSNYGDLFKLTIIPD 350

Query: 313 HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
            ++ +     I YFDTI     M +LK+GYLF+ SEFG++ L+QF+++G    +  S S+
Sbjct: 351 ENDRNRPVASISYFDTIYQAEKMHILKNGYLFSNSEFGDNYLFQFESLGEGETLSTSKSS 410

Query: 373 LMETEEGFQPVFFQPRGLKNLVRIEQVE-SLMPIMDMRIANLFEEEAPQIFTLCGRGPRS 431
             E  + F+    +   L+NL RIE  + +  PI+   I N    + P   T+  R   +
Sbjct: 411 --EVSKQFE----RSETLENL-RIESTQKNANPIISSCITN----DCP--LTIMVRS-EN 456

Query: 432 SLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGE-TVE 490
           +L++ + G+  + M  + LP  P  +W+++ N N  +   + + F  +  +L + + ++E
Sbjct: 457 NLKLYKSGVNFNTMISTNLPSSPGKLWSIRLNCN-VYHKLLFLGFQKSLTILEVDDDSIE 515

Query: 491 E--VSDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN------EWRTPGKRT 541
           E  +  + F L+   ++ V  IG+ S++QV  + +R I  D          +W  P    
Sbjct: 516 ELRIDKNPFNLNKDLTIFVGAIGERSIIQVCENEVRQIVYDKDQQTYVSKLDWYPPAGIR 575

Query: 542 IVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRF 601
           IV   S + Q+V+ALS  E++YFE+++  Q   + + +   D+  L  +       RS +
Sbjct: 576 IVCASSTKSQLVLALSNCEIVYFEIEVDSQNDSLNELQSRADMGDLITSISLSNTNRSEY 635

Query: 602 LAVGSYDNTIRILSLDPDDC---MQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
           LAVG  ++ ++ILSL  +D     +++S+Q+V S    +  ++         G D    +
Sbjct: 636 LAVGLKNSLVKILSLSLNDTETFFEVVSIQAVMSSVSDIRIIQ---------GLD----M 682

Query: 659 FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM----------- 707
            L+ GL++GV  R+ + +  GQ+ D R++++G  P  LF ++      M           
Sbjct: 683 ELHVGLKDGVYLRSKLSVTDGQIYDIRTKYMGPEPV-LFYIISNTDLTMKSTEADNDDGE 741

Query: 708 ----------------------LCLSSRPWLGYIHRGRFLLTP 728
                                 L  S+R W+ Y ++  F + P
Sbjct: 742 EESDEEENVGAVIRENKRTPLVLIKSTRTWVSYEYKSLFYIKP 784



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 148/333 (44%), Gaps = 56/333 (16%)

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR--KCENKLFPNTIVSI 990
            SL+LLHKT V+    A+   +  +L  I   L LY +GKKRLLR  KC        + ++
Sbjct: 1010 SLDLLHKTLVDDQVCAMLILKDLILVPIFGNLILYSIGKKRLLRSGKCMTPPSLTKVTAL 1069

Query: 991  NTYRD-RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGN 1049
            +++ D RI VGDI ES     Y  D   L   ADD   R + +   +D  T+ G+DK+ N
Sbjct: 1070 SSWNDERIAVGDIHESVMIFDYNSDSKTLKPIADDITKRDVISIEFLDSRTVIGSDKYSN 1129

Query: 1050 IYFVRL----PQDVSDEIEE----DPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSL 1101
            I+ +R+     Q V D +E           +  +   +   P K++    F++ D+VT +
Sbjct: 1130 IWTLRIDLEDDQKVLDNVENPMLIASENSSMISKLPNVMECPFKLKLTNHFYLNDIVTDI 1189

Query: 1102 QKASLVPGGGESVIYGTVM-GSLGAMLAFSSRDDVDFFSHLEMHMR---------QEHP- 1150
                        VI+ T + G++G ++   ++  V   + ++  M          QE   
Sbjct: 1190 HIVESAHISDRPVIFYTCLQGTIGCLVPLLTKAQVTTLNAIKNEMSNIDYTFYSIQEDIG 1249

Query: 1151 ---------------------------------PLCGRDHMAYRSAYFPVKDVIDGDLCE 1177
                                              +  R+H  YRS Y PVK++IDGDLCE
Sbjct: 1250 NDKKNYIEDKGKAREENETIINTNNTTTPEGAYSIVNRNHSKYRSYYAPVKNIIDGDLCE 1309

Query: 1178 QFPTLSLDLQRKIADEL-DRTPGEILKKLEEIR 1209
            +F  L+ + + +I   L D  P +I++++ E+R
Sbjct: 1310 RFLYLNSNERLEICKNLKDTKPEDIIRQINEMR 1342


>gi|308504990|ref|XP_003114678.1| hypothetical protein CRE_28194 [Caenorhabditis remanei]
 gi|308258860|gb|EFP02813.1| hypothetical protein CRE_28194 [Caenorhabditis remanei]
          Length = 270

 Score =  259 bits (662), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 120/247 (48%), Positives = 174/247 (70%), Gaps = 16/247 (6%)

Query: 981  KLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDT 1040
            K FP +IV+I +   RI V D QES HF +YR+ +NQL +FADD+ PR+++    +D+ T
Sbjct: 21   KNFPVSIVNIQSTGQRIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVSCVCVLDYHT 80

Query: 1041 MAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTS 1100
            +A ADKFGN+  VRLP+ V++++++DPT  K  W++G LNGA  K+E +  F +GD +TS
Sbjct: 81   VAVADKFGNLAVVRLPERVNEDVQDDPTVSKSVWDRGWLNGASQKVELVANFFIGDTITS 140

Query: 1101 LQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY 1160
            LQK SL+PG  E+++Y T+ G++G +++F S+D+VDFF++LEMH+R E+PPLCGRDH+AY
Sbjct: 141  LQKTSLMPGANEALVYTTIGGAIGCLVSFMSKDEVDFFTNLEMHVRSEYPPLCGRDHLAY 200

Query: 1161 RSAYFPVK----------------DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            RS Y P K                 VIDGD+CEQF  + L  Q+++A+EL +T  EI KK
Sbjct: 201  RSYYAPCKVCFNFLLFRSIVSLFQSVIDGDICEQFSLMDLSKQKEVAEELGKTVSEISKK 260

Query: 1205 LEEIRNK 1211
            LE+IR +
Sbjct: 261  LEDIRTR 267


>gi|225443990|ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
          Length = 1089

 Score =  257 bits (657), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 295/1244 (23%), Positives = 531/1244 (42%), Gaps = 197/1244 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+G +   +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    VWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR  G  +D++ + ++  +  +L+++   + V  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVITRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCS 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
             P    +  D  +A    T + A + +            + V   W++  +DNGA++L+ 
Sbjct: 174  KPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWAQNNLDNGADLLIP 221

Query: 237  VPGGGDGP--SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            VP     P   GVL+  E  ++Y +         IP R  +    G   V A   R    
Sbjct: 222  VP-----PPLCGVLIIGEETIVYCS---ASAFKAIPIRPSITKAYGR--VDADGSR---- 267

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
              +LL    G +  + + H+ E V+ LKI+      + +++  L + +++  S +G+  L
Sbjct: 268  --YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAFVYVGSSYGDSQL 325

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
             +   I   PD + S   ++E                      +  +L PI+D  + +L 
Sbjct: 326  IK---IHLQPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLE 360

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
             +   Q+ T  G     SLRI+R G+ ++E A  +L G+   +W+++ + +D  D ++VV
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPHDTFLVV 419

Query: 475  SFNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR-- 530
            SF + T  L +++ + +EE    GF     +L       D L+QV  S +R +    R  
Sbjct: 420  SFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSREL 479

Query: 531  INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIA 590
             NEW+ P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  D++CLDI 
Sbjct: 480  RNEWKAPSGYSVNVATANATQVLLATGGGHLVYLEIG-DGTLTEVKHAQLEYDISCLDIN 538

Query: 591  SVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVG 647
             + E    S+  AVG + D ++RI SL PD  + +++ + +     P S+L    +    
Sbjct: 539  PIGENPNFSQLAAVGMWTDISVRIFSL-PD--LNLITKEYLGGEIIPRSVLLCSFEGIP- 594

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
                       +L   L +G L   +++M TG+L+D +   LG +P  L +        +
Sbjct: 595  -----------YLLCALGDGHLLNFLLNMSTGELTDRKKVSLGTQPITLRTFSSKNTTHV 643

Query: 708  LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGE 767
               S RP + Y    + L + ++ + + +   F+S    + +       L + TI+ + +
Sbjct: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTIGTIDDI-Q 702

Query: 768  TFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGN 827
              +  ++PL    RR   Q + +   I                                 
Sbjct: 703  KLHIRSIPLGEHARRICHQEQSRTFAICSL------------------------------ 732

Query: 828  MDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
                       KY+  S E         D  +  IR+LD ++        L   E   SI
Sbjct: 733  -----------KYNQSSTE---------DSEMHFIRLLDDQTFEFISTYPLDTFEYGCSI 772

Query: 888  CTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIP 946
             + +F D +      VGTA  L   P+ N    G I ++  VE+GK L+L+ + + +G  
Sbjct: 773  LSCSFSD-DSNVYYCVGTAYVL---PEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAV 826

Query: 947  LALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVG 1000
             +L  F G+LLA I   ++LY     D G + L  + E+    + + + + T  D I VG
Sbjct: 827  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSESGHHGHILALYVQTRGDFIVVG 884

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+ +S     Y+ +E  +   A D    W++A   +D D   GA+   NI+ VR      
Sbjct: 885  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVR------ 938

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGES 1113
                        K  +G  +    ++E + ++H+G+ V   +  SLV        G   +
Sbjct: 939  ------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 986

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVK 1168
            VI+GTV G +G ++A    D   F   L+ ++R+    + G  H  +RS          K
Sbjct: 987  VIFGTVNGVIG-VIASLPHDQYVFLEKLQANLRKVIKGVGGLSHEQWRSFNNEKKTVDAK 1045

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPG----EILKKLEEI 1208
            + +DGDL E F    LDL R   DE+ +       E+ K++EE+
Sbjct: 1046 NFLDGDLIETF----LDLNRTRMDEISKAMAVSVEELCKRVEEL 1085


>gi|413946716|gb|AFW79365.1| hypothetical protein ZEAMMB73_562969 [Zea mays]
          Length = 1089

 Score =  256 bits (655), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 281/1241 (22%), Positives = 535/1241 (43%), Gaps = 191/1241 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+      +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    VWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPG 117
            G I ++  FR     +D++ + ++  +  +L+++  K+ +  +   +   + G R    G
Sbjct: 60   GRIATIELFRPHNETQDFLFIATERYKFCVLQWDAEKSELITRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLH---GCA 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE-PVDNGANMLVT 236
             P    +  D  +     T + A + +            + V   WS+  VDNGA +L+ 
Sbjct: 174  KPTIVVLYQDNKDVRHVKTYEVALKDK------------DFVEGPWSQNNVDNGAGLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GV++  E  ++Y N  +   +A+  +++         I+ A          
Sbjct: 222  VPA---PLGGVIIIGEEQIVYCN-ANSTFKAIPIKQS---------IIRAYGRVDPDGSR 268

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + L H+ E V+ LKI+Y     + +S+  L +G ++  S FG+  L +
Sbjct: 269  YLLGDNTGILHLLVLTHERERVTGLKIEYLGETSIASSISYLDNGVVYVGSRFGDSQLVK 328

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               + AD     +S + +E                    +E+  +L PI+D  + +L  +
Sbjct: 329  LN-LQAD-----ASGSFVEI-------------------LERYVNLGPIVDFCVVDLDRQ 363

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLR++R G+ ++E A  +L G+   +W++K ++ND FD Y+VVSF
Sbjct: 364  GQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGI-KGLWSLKSSINDPFDMYLVVSF 422

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GF   T +L      +D L+QV  + +R +    R  +N
Sbjct: 423  ISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVN 482

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            +W  P   ++    +N  QV++A  GG L+Y E+    +L+EV+  ++  +++CLD+  +
Sbjct: 483  QWNAPAGFSVNVASANASQVLLATGGGHLVYLEI-RDAKLVEVKHAQLEHEISCLDLNPI 541

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
             E  + S   AVG + D ++RI SL PD  ++++  +++     P S+L   ++      
Sbjct: 542  GENPQYSSLAAVGMWTDISVRIFSL-PD--LELIRKENLGGEIVPRSVLLCTLEGVS--- 595

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G LF  +++  TG+L+D +   LG +P  L +    G   +  
Sbjct: 596  ---------YLLCALGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFA 646

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + L + ++ + + +   F++    + +       L + TI+ + +  
Sbjct: 647  SSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDI-QKL 705

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            +   +PL    RR   Q + + +                                     
Sbjct: 706  HIRTIPLNEQARRICHQEQSRTLAFC---------------------------------- 731

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
                              + Y ++  +     IR+LD ++  + C+  L   E   SI +
Sbjct: 732  -----------------SFKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYECGCSIIS 774

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             +F D +      VGTA  +   P+ N    G I ++  VE+G SL+L+ + + +G   +
Sbjct: 775  CSFAD-DSNVYYCVGTAYVI---PEENEPTKGRILVFA-VEDG-SLQLIVEKETKGAVYS 828

Query: 949  LCQFQGRLLAGIGPVLRLYDL-----GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
            L  F G+LLA I   ++LY       G   L  +C +      + +  T  D I VGD+ 
Sbjct: 829  LNAFNGKLLAAINQKIQLYKWMSREDGSHELQSECGHHGHILALYT-QTRGDFIVVGDLM 887

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            +S     Y+ +E+ +   A D    W+TA   +D +   GA+   N++ VR   D + + 
Sbjct: 888  KSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENSYNLFTVRKNSDAATDD 947

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP-------GGGESVIY 1116
            E                    ++E + ++H+G+ V   +  SLV        G   +VI+
Sbjct: 948  ER------------------ARLEVVGEYHLGEFVNRFRHGSLVMRLPDSDIGQIPTVIF 989

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY-----FPVKDVI 1171
            GT+ G +G ++A    D   F   L+  + +    +    H  +RS +        ++ +
Sbjct: 990  GTINGVIG-IIASLPHDQYIFLEKLQSTLVKYIKGVGNLSHEQWRSFHNDKKTAEARNFL 1048

Query: 1172 DGDLCEQFPTLSLDLQRKIADELDRTPG----EILKKLEEI 1208
            DGDL E F    LDL R   +E+ +  G    E+ K++EE+
Sbjct: 1049 DGDLIESF----LDLSRSKMEEVSKAMGVPVEELSKRVEEL 1085


>gi|410079495|ref|XP_003957328.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
 gi|372463914|emb|CCF58193.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
          Length = 1267

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 203/742 (27%), Positives = 354/742 (47%), Gaps = 93/742 (12%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF-----SGTKTP---EIVVARGKVLELLRPENSGRIETL 52
           ++LY LTLQ+ +    +  G+F     +  K P   ++++A    +EL    ++G    +
Sbjct: 8   IHLYHLTLQRQSNYTLSCTGHFVDLVETQVKQPRPLQLLLATETHVELYDI-STGSFSKI 66

Query: 53  VSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFD--KIHQETFGKSG 110
               IF  ++++  FR   S+ ++I + SD+G + IL    S + +    ++ E   +SG
Sbjct: 67  YQWPIFATLKTMQSFRPINSKFNFIAITSDAGNLTILHITKSHHSYKLTTLYNEPITRSG 126

Query: 111 CRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLN-RDTAARLTISSPLEAHKSHTIVYSI 169
            RR+   +Y  +DP+ R +MI A EK K  Y+LN  +  ++LTISSPLE  +S+ I  S+
Sbjct: 127 IRRLAAIEYCQIDPRSRCLMISAIEKFKFAYLLNYNEVDSKLTISSPLEIIRSNYITLSL 186

Query: 170 CGIDCGF-DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVD 228
                 F DNPIFA++E+D             S    +L FY LDL LNH+ +K    + 
Sbjct: 187 VACASNFIDNPIFASLEID-------------SHKNSHLIFYMLDLSLNHIVKKSDYTLH 233

Query: 229 NGANMLVTVPG-----------GGDGPS---GVLVCAENFVIYKN-QGHPDVRAVIPRRA 273
             AN L+ +P            G D  S    V+V   ++++ K+  G+ +++  IP+R 
Sbjct: 234 PSANFLMDLPDLAKYGISTNILGNDEQSINSFVIVGFNSYILIKDLNGYYNIKISIPKRE 293

Query: 274 DL----PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHD--NEHVSELKIKYFD 327
           +       +  V I+S      K  FF LLQT  GD+FK+ ++ D  + +   +   YFD
Sbjct: 294 NSTHNDSNDHPVTIISGCLQTVKDGFFILLQTNVGDLFKLKVDPDENDRNRPTVSFTYFD 353

Query: 328 TIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQP 387
           TIP +  + + K+GYLFA  E  ++ L QF+++G+D         + E  E F P     
Sbjct: 354 TIPRSEQLHIFKNGYLFANCELHDNYLLQFESLGSD---------IQEINESFSP---NL 401

Query: 388 RGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAV 447
           + L+NL   +  ++L P++   I     +  P + T        S+R     +   +   
Sbjct: 402 QSLENLAISDTQKNLNPLLPNTIN--LNQSTPLVLT-QKYANDDSIRHFSNSIDFEDFTS 458

Query: 448 SQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTP----- 502
           S LP  P  +WT+K N +  F   +V+SF N+T++L +    + + D  F D+ P     
Sbjct: 459 SDLPLNPQNLWTLKLN-SSAFHELLVLSFQNSTMLLKVEN--DSIEDMKFPDSVPFILKN 515

Query: 503 --SLAVSLIGDDSLMQV-HPSGIRHIRED-GRINEWRTPGKRTIVKVGSNRLQVVIALSG 558
             ++ V+++ +  ++QV H   ++    D  +++ W  P    I+   S   Q+V+ALS 
Sbjct: 516 DKTIHVTILNNIYIIQVCHNQLVQVSTSDFKQVSSWFPPAGIHIIAASSTHKQLVVALSN 575

Query: 559 GELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLD- 617
            ++IYFE+      L     ++      L ++   +  K S+ L V + D  I I+SLD 
Sbjct: 576 NQVIYFEMPGEDSTLVESTKKLQLSTRVLTLSLRLDVNKFSKNLIVATDDALIHIVSLDH 635

Query: 618 ---PDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVV 674
               D+ ++I S Q +     S+ ++E    +G ++G    +  F   G  N +      
Sbjct: 636 EKSEDEFLEITSFQKLLGNVSSITYIEDTIHLGLDNGVYIRSKFF---GGNNDL------ 686

Query: 675 DMVTGQLSDSRSRFLGLRPPKL 696
                 +SD R+++LG +P  L
Sbjct: 687 ------ISDVRTKYLGNKPVNL 702



 Score =  113 bits (283), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 167/384 (43%), Gaps = 80/384 (20%)

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            S  T+NF DK    +L+      L F                 +E   L  +H+T +   
Sbjct: 908  SATTLNFSDKTVHLILSTDKGTLLTFE------------LSLKKENYKLLKMHETLIGEK 955

Query: 946  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD----RIYVGD 1001
               +  F   LL  +   L LY LGKK+LL+K   KL P +I  ++T  +    RI VGD
Sbjct: 956  VSTIIPFNNMLLVPLFGSLVLYSLGKKQLLKKSITKLIP-SIRRVSTLANWENLRIAVGD 1014

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
              ES    ++ +  N+    ADD++ R +TA   +D  T+ G DK+GNI+ +RLP+D   
Sbjct: 1015 NYESVTVYEFDKQSNEFIPLADDTIKRSVTALAFLDELTVIGGDKYGNIWTLRLPEDT-- 1072

Query: 1062 EIEEDPTGGKIKWEQG---KLNGAPNKMEEIVQFHVGD------VVTSLQKASLVPGGGE 1112
                DP   +I   +     +   P K++    F+V D      V+ SLQ++  V     
Sbjct: 1073 ----DPVNTEINSFRDLPKNIMECPFKLKLKNHFYVNDIPMSFHVIESLQRSDRV----- 1123

Query: 1113 SVIYGTVMGSLG--------------------------AMLAF----SSRDDVDFFSHLE 1142
            +V+Y  + G++G                          AML F     SRDD D ++ + 
Sbjct: 1124 TVLYSGLQGTIGIFIPILSKNQIKTLKSLETSIDNLEMAMLDFRSDKKSRDDEDDYASVT 1183

Query: 1143 ----MHMRQEHPPL-------CGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIA 1191
                +  R +   +        GRD   YRS Y PVK VIDGDLCE F   S   Q  I 
Sbjct: 1184 EERALVSRDKANEVIEGSYSTVGRDRFIYRSYYAPVKHVIDGDLCETFIDYSQIEQDLIC 1243

Query: 1192 DELDR--TPGEILKKLEEIRNKIV 1213
             ++ +   P +I++ + E+R   +
Sbjct: 1244 QDIGKKFKPLDIIRMINEVRTNYI 1267


>gi|168066745|ref|XP_001785293.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663100|gb|EDQ49884.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1090

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 303/1240 (24%), Positives = 517/1240 (41%), Gaps = 194/1240 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y +T  +PT +  +  G F+  +   +++A+   +E+     SG ++ ++   I+G I +
Sbjct: 6    YVVTAHKPTNVTHSCVGYFTNPQELNLIIAKCTRIEIHLLTASG-LQPMLDVPIYGRIAT 64

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVD 123
            L  FR  G  +D + +  +  +  +L+++    +              R    GQ   VD
Sbjct: 65   LELFRPPGESQDVLFISFERYKFCVLQWDAETGLLVTRAMGDVSDRIGRPTDNGQIGIVD 124

Query: 124  PKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAA 183
            P  R  +IG      L  V+  D   +L  +  +   +   +         G   P  A 
Sbjct: 125  PDCR--LIGLHLYDGLFKVIPIDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIAV 179

Query: 184  IELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTVPGGGD 242
            +  D  +A    T +        +   E D G       W    +DNGA +L+ VP    
Sbjct: 180  LYQDNKDARHVKTYE--------VQLKEKDFG----EGPWLQNNLDNGAGLLIPVPL--- 224

Query: 243  GP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQT 301
             P  G ++  E  ++Y N     V   IP R  +    G +    +         +LL  
Sbjct: 225  -PLGGAIIIGEQTIVYYNGS---VFKAIPIRPSITKAYGRVDSDGSR--------YLLSD 272

Query: 302  EYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF--QA 359
              G ++ + + HD E VS L ++        +++  L +G +F  S +G+  L +   QA
Sbjct: 273  HNGMLYLLVISHDKERVSALNVEPLGETSAASTLSYLDNGVVFVGSSYGDSQLIRLNHQA 332

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
               +  VE                            +E   +L PI+D+ + +L  +   
Sbjct: 333  DAKNSYVEV---------------------------LESYVNLGPIVDLCVVDLERQGQG 365

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            Q+ T  G     SLRI+R G+ ++E A ++L G+   +W+++ + +D +D ++VVSF + 
Sbjct: 366  QVVTCSGAFKDGSLRIVRNGIGINEQASAELQGI-KGMWSLRASSSDVYDTFLVVSFISE 424

Query: 480  TLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWR 535
            T +L++   + +EE    GF     +L       D L+QV    +R +    R  + EW+
Sbjct: 425  TRILAMNTDDELEETEIDGFDSEAQTLFCYNAVHDQLVQVTAGSLRLVDAKTRRQLTEWK 484

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEG 595
             P   TI    +N  QV++A  GG L+Y E+   G L+EV   ++  +++CLDI  V + 
Sbjct: 485  APAPMTINVATANASQVLLATGGGNLVYIEIGQ-GTLVEVAHVQLEYEISCLDINPVGDN 543

Query: 596  RKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
             +RS  +AVG + D +IRI +L P   +    +      P S+LF          DG   
Sbjct: 544  PERSNLVAVGMWTDISIRIFAL-PSLTLITKEMLGGEIIPRSVLFCSF-------DGI-- 593

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
                +L   L +G LF   ++  TG+LSD +   LG +P  L +        +   S RP
Sbjct: 594  ---AYLLCALGDGHLFNFTLNPATGELSDRKKISLGTQPIALRTFRSKNTTHVFAASDRP 650

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
             + Y    + L + ++ + + +   F+S    + +       L + TI+ + +  +   +
Sbjct: 651  TVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDEI-QKLHIRTV 709

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENG 834
            PL   PRR   Q + +   I                   C      G NG          
Sbjct: 710  PLGEHPRRIAHQEQSRTFAI-------------------CSAKYAPGSNGE--------- 741

Query: 835  DDENKYDPLSDEQY-----GYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
            D E  Y  L ++Q      G+P             LDP              E   SI T
Sbjct: 742  DMETHYVRLIEDQTFEIISGFP-------------LDPY-------------ENGCSIIT 775

Query: 890  VNFHDKEHGTLLAVGTAKGL--QFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
             +F D +      VGTA  L  +  P +    G I ++  VE+GK ++L+ + +V+G   
Sbjct: 776  CSFTD-DSNVYYCVGTAYALPEESEPSK----GRILVFS-VEDGK-IQLVAEKEVKGAVY 828

Query: 948  ALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGD 1001
             L  F G+LLAGI   + LY     D G + L  + E+    + + + + +  D I VGD
Sbjct: 829  NLNAFNGKLLAGINQKIALYKWTLRDDGTREL--QYESSHHGHILALYVQSRGDFIVVGD 886

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD-VS 1060
            + +S     Y+ +E  +   A D    W+TA   +D DT  GA+   N++ VR   D  +
Sbjct: 887  LMKSISLLIYKPEEGAIEERARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKNNDAAT 946

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---PGGGES---- 1113
            DE            E+G+L       E + ++H+G+ V   +  SLV   P    S    
Sbjct: 947  DE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSEASQIPT 987

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVK 1168
            VI+GTV G +G ++A   +D   F   L+  + +    + G  H  +RS          +
Sbjct: 988  VIFGTVNGVIG-VIASLPQDQFLFLQKLQQALVKVIKGVGGLSHEQWRSFSNERKTVDAR 1046

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            + +DGDL E F  LS +   +IA  L+ +  E+ K +EE+
Sbjct: 1047 NFLDGDLIESFLDLSRNKMEEIATSLEVSVEELHKAVEEL 1086


>gi|356512636|ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine max]
          Length = 1089

 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 284/1237 (22%), Positives = 524/1237 (42%), Gaps = 183/1237 (14%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+  +   +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR  G  +DY+ + ++  +  +L+++  +  +  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETAELVTRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCS 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
             P    +  D  +A    T + A    K+  F E           WS+  +DNGA++L+ 
Sbjct: 174  KPTIVVLYQDNKDARHVKTYEVA---LKDKDFLE---------GPWSQNNLDNGADLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GVL+  E  ++Y +    +    IP R  +    G +    +         
Sbjct: 222  VP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDPDGSR-------- 267

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + + H+ E V+ LKI+      + +++  L + +++  S +G+  L +
Sbjct: 268  YLLGDHTGLLSLLVITHEKEKVTGLKIEPLGETSIASTISYLDNAFVYIGSSYGDSQLIK 327

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               +   PD + S        EG                +E+  +L PI+D  + +L  +
Sbjct: 328  ---LNLQPDAKGSYV------EG----------------LERYVNLGPIVDFCVVDLERQ 362

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLR++R G+ ++E A  +L G+   +W+++ + +D FD ++VVSF
Sbjct: 363  GQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSF 421

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GF     +L       + L+QV  S +R +    R   N
Sbjct: 422  ISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRELRN 481

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            EW  P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI  +
Sbjct: 482  EWHAPSGYSVNVATANATQVLLATGGGHLVYLEIG-DGILQEVKHAQLEYEISCLDINPI 540

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
             E    S   AVG + D ++RI SL PD  + +++ + +     P S+L    +      
Sbjct: 541  GENPNHSHLAAVGMWTDISVRIFSL-PD--LSLITKEQLGGEIIPRSVLLCAFEGIS--- 594

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G L   +++  TG+L+D +   LG +P  L +        +  
Sbjct: 595  ---------YLLCALGDGHLLNFMLNTSTGELADRKKVSLGTQPITLRTFSSKNTTHVFA 645

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + L + ++ + + +   F+S    + +       L + TI+ + +  
Sbjct: 646  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKL 704

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            +  ++PL    RR   Q + +   I                                   
Sbjct: 705  HIRSIPLGEHARRICHQEQSRTFAICSL-------------------------------- 732

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
                     KY+P S E         D  +  +R+LD ++        L   E    I +
Sbjct: 733  ---------KYNPASGE---------DSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIIS 774

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             +F D ++     VGTA  L   P+ N    G I ++  VE+GK L+L+ + + +G    
Sbjct: 775  CSFSD-DNNVYYCVGTAYVL---PEENEPTKGRILVFA-VEDGK-LQLIAEKETKGAVYC 828

Query: 949  LCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
            L  F G+LLA I   ++LY     D G   L  +C +      +  + T  D I VGD+ 
Sbjct: 829  LNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSECGHHGHILALY-VQTRGDFIVVGDLM 887

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            +S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR         
Sbjct: 888  KSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVR--------- 938

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVIY 1116
                     K  +G  +    ++E + ++H+G+ V   +  SLV        G   +VI+
Sbjct: 939  ---------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 989

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVI 1171
            GT+ G +G + +      V F   L+ ++R+    + G  H  +RS          ++ +
Sbjct: 990  GTINGVIGVIASLPHEQYV-FLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVEARNFL 1048

Query: 1172 DGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            DGDL E F  L+     +I+  LD +  E+ K++EE+
Sbjct: 1049 DGDLIESFLDLNRSKMDEISKALDVSVEELCKRVEEL 1085


>gi|168047617|ref|XP_001776266.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672361|gb|EDQ58899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1089

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 296/1226 (24%), Positives = 522/1226 (42%), Gaps = 167/1226 (13%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y +T Q+PT +  +  G F+  +   +++A+   +E+     SG +++++   ++G I +
Sbjct: 6    YVVTAQKPTNVTHSCVGYFTNPQELNLIIAKCTRIEIHLLTASG-LQSMLDVPLYGRIAT 64

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            L  FR  G  +D + +  +  +  +L+++  + +   +   +   ++G R    GQ   V
Sbjct: 65   LELFRPPGESQDVLFISFERYKFCVLQWDAETGSPITRAMGDVSDRTG-RPTDNGQIGIV 123

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
            DP  R  +IG      +  V+  D   +L  +  +   +   +         G  NP  A
Sbjct: 124  DPDCR--LIGLHLYDGMFKVIPIDNKGQLKEAFNIRLEELQVLDIKFL---YGCANPTIA 178

Query: 183  AIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTVPGGG 241
             +  D  +A    T +        +   E D G       W    +DNGA +L+ VP   
Sbjct: 179  VLYQDNKDARHVKTYE--------VNLKEKDFG----EGPWLQNNLDNGAGLLIPVPL-- 224

Query: 242  DGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQ 300
              P  G ++  E  ++Y N     V   IP R  +    G   V +   R      +LL 
Sbjct: 225  --PLGGAIIIGEQTIVYYNGS---VFKAIPIRPSITKAYGR--VDSDGSR------YLLS 271

Query: 301  TEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI 360
               G ++ + + HD E VS L ++        +++  L +G +F  S +G+  L +   +
Sbjct: 272  DHNGMLYLLVISHDKERVSALNVEPLGETSAASTLSYLDNGVVFVGSSYGDSQLIR---L 328

Query: 361  GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQ 420
                DV+ S   ++E+                        +L PI+D+ + +L  +   Q
Sbjct: 329  NHQADVKGSYVEVLES----------------------FVNLGPIVDLCVVDLERQGQGQ 366

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT 480
            + T  G     SLRI+R G+ ++E A  +L G+   +W+++ + +D +D ++VVSF + T
Sbjct: 367  VVTCSGAFKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRASSSDVYDTFLVVSFISET 425

Query: 481  LVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRT 536
             +L++   + +EE    GF     +L       D L+QV    +R +    R  + EW+ 
Sbjct: 426  RILAMNTDDELEETEIDGFDSEAQTLFCHNAVHDQLVQVTAGSLRLVNAKTRKQLTEWKA 485

Query: 537  PGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGR 596
            P   TI    +N  QV++A  GG L+Y E+   G L  V   ++  +++CLDI  V E  
Sbjct: 486  PAPMTINVATANASQVLLATGGGNLVYIEIGQ-GTLTGVAHSQLEYEISCLDINPVGENP 544

Query: 597  KRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHP 655
            +RS  +AVG + D ++RI +L P   +    +      P S+LF          DG    
Sbjct: 545  ERSNLVAVGMWTDISVRIFAL-PSLTLINKEMLGGEIIPRSVLFCSF-------DGL--- 593

Query: 656  ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPW 715
               +L   + +G LF  +++  TG+LSD +   LG +P  L +        +   S RP 
Sbjct: 594  --AYLLCAVGDGHLFNFMLNPSTGELSDRKKISLGTQPIALRTFRSKNTTHVFAASDRPT 651

Query: 716  LGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
            + Y    + L + ++ + + +   F+S    + +       L + TI+ + +  +   +P
Sbjct: 652  VIYSSNKKLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDDI-QKLHIRTVP 710

Query: 776  LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGD 835
            L   P R   Q + +   I                   C      G N         N D
Sbjct: 711  LGERPCRIAHQEQSRSFAI-------------------CSAKYSQGPN---------NED 742

Query: 836  DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDK 895
             E  Y                     +R+++ ++   T    L   E   SI T +F D 
Sbjct: 743  IETHY---------------------VRLIEDQTFEITSGFALDLYEIGCSIITCSFTD- 780

Query: 896  EHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGR 955
            +      VGTA  L    +     G I ++  VE+GK L+L+ + +++G    L  F G+
Sbjct: 781  DSNVYYCVGTAYALP--EESEPTKGRILVF-LVEDGK-LQLVAEKEMKGAVYNLNAFNGK 836

Query: 956  LLAGIGPVLRLYDLGKK---RLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            LLAGI   + LY    +   R+L    +       + + +  D I VGD+ +S     Y+
Sbjct: 837  LLAGINQKIALYKWTLRDGTRVLEIESSHHGHILALYVQSRGDFIVVGDLMKSISLLIYK 896

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD-VSDEIEEDPTGGK 1071
             +E  +   A D    W+TA   +D DT  GA+   N++ VR   D  +DE         
Sbjct: 897  PEEGAIEERARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKNNDAATDE--------- 947

Query: 1072 IKWEQGKLN--GAPNKMEEIVQFHVGDVVTSL--QKASLVPGGGESVIYGTVMGSLGAML 1127
               E+G+L   G  +  E + +F  G +V  L   +ASL+P    +VI+GTV G +G ++
Sbjct: 948  ---ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEASLIP----TVIFGTVNGVIG-VI 999

Query: 1128 AFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTL 1182
            A   +D   F   L+  + +    + G  H  +RS          ++ +DGDL E F  L
Sbjct: 1000 ASLPQDKFLFLQKLQQALVKVIKGVGGLSHEQWRSFSNERKTVDARNFLDGDLIESFLDL 1059

Query: 1183 SLDLQRKIADELDRTPGEILKKLEEI 1208
            S +   +IA  L+ +  E+ K++EE+
Sbjct: 1060 SRNKMEEIAAPLEISVEELCKRVEEL 1085


>gi|157128864|ref|XP_001655231.1| DNA repair protein xp-e [Aedes aegypti]
 gi|108882186|gb|EAT46411.1| AAEL002407-PB [Aedes aegypti]
          Length = 1138

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 293/1224 (23%), Positives = 511/1224 (41%), Gaps = 164/1224 (13%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT + A + GNF+ T    ++VA+   LE  L+ PE    I+ +    I G I
Sbjct: 5    YIVTAQKPTAVTACVTGNFTSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEI---GINGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN---VFDKIHQETFGKSGCRRIVPGQ 118
              +  FR   +QKD I + +     +ILE     +   +  K H     + G +    G 
Sbjct: 62   AVMKLFRPAEAQKDLIFILTHRYNAMILECAVQGDDIEIITKAHGNVADRVG-KPAETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DPK R + +   E    +  L+RDT      S  +E      + +       G  +
Sbjct: 121  LAVIDPKARVIGMRLYEGLFKIIPLDRDTHELKATSLRMEEVHVQDVEFLY-----GTQH 175

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P    I        QD  G+     + NL     D     ++ K  + V+  A ML+ VP
Sbjct: 176  PTLIVIH-------QDLNGRHIKTHEINLK----DKDFTKIAWK-QDNVETEATMLIPVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
                G   +++  E+ V +    +  V   I +++          ++         F +L
Sbjct: 224  TPLGG--AIVIGQESVVYHDGDSYVAVAPAIIKQS---------TINCYARVDSKGFRYL 272

Query: 299  LQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
            L    G +F + LE +        V ++K++    I +   +  L +G LF  S  G+  
Sbjct: 273  LGNMSGHLFMMFLETEENSKGLLSVKDIKVELLGDITIPECITYLDNGVLFIGSRHGDSQ 332

Query: 354  LYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANL 413
            L +      D     +  T+MET                        +L PI+DM I +L
Sbjct: 333  LVKLNTTAGD---NGAYVTVMET----------------------FTNLAPIIDMCIVDL 367

Query: 414  FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE-FDAYI 472
             ++   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++  ++D  +D  +
Sbjct: 368  EKQGQGQMITCSGSYKEGSLRIIRNGIGIQEHACIDLPGI-KGMWALRVGIDDSPYDNTL 426

Query: 473  VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
            V+SF   T +L++ GE VEE    GFL    +   + +    ++QV P+  R I+ D + 
Sbjct: 427  VLSFVGHTRILTLSGEEVEETEIPGFLSDQQTFYCANVDFGQIIQVTPTTARLIQCDNKS 486

Query: 531  -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGD--VACL 587
             I EW+ P  + I  V  N  Q+V A +  ++ Y E+   G+   V K  ++ D  VACL
Sbjct: 487  MICEWKPPDDKRISVVACNSCQMVCA-TACDIYYIEI---GESKLVHKSTVTLDYEVACL 542

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQAS 645
            DI+ + +    +  +AVG + +    +   P+  ++++  + +     P S+L    +  
Sbjct: 543  DISPLEDNATHAELVAVGLWTDISACILRLPN--LEVVHTEKLGGEIIPRSILMAHFEGI 600

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
            V            +L   L +G +F  V+D  T +L+D +   LG +P  L +       
Sbjct: 601  V------------YLLCALGDGSMFYFVLDKNTNRLTDQKKVTLGTQPTILKTFRSLSTT 648

Query: 706  AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
             +   S RP + Y    + + + ++ + + +  S +++   + +     N++ + TI+ +
Sbjct: 649  NVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAEAYQDSLALATKNSVILGTIDEI 708

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAAGM 820
             +    T +PL  +PRR   Q   +   +I       D   LT   + A+ +        
Sbjct: 709  QKLHIRT-VPLGESPRRIAYQEASQTFGVITVRTDIQDSSGLTPSRQSASTQT------T 761

Query: 821  GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
                + NM  ++ G         S+ ++G      +  V  + ++D  +       +   
Sbjct: 762  NVTLSTNMGLLKAG--------ASNAEFG-----QEVEVHNLLIIDQNTFEVLHAHQFMQ 808

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKT 940
             E A S+ +    + +  T   VGTA      P+  +  G I IY + +   +L  + + 
Sbjct: 809  TEYAMSLISAKLGN-DPNTYYIVGTALVNPEEPEPKV--GRIIIYHYAD--GNLTQVSEK 863

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRIYV 999
            +++G   +L +F GR+LA I   +RLY+    + LR  E   F N + +   T  D I V
Sbjct: 864  EIKGSCYSLVEFNGRVLASINSTVRLYEWTDDKDLR-LECSHFNNVLALYCKTKGDFILV 922

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+  S    +Y++ E      A D  P W+TA   +D D   GAD   N+ FV L    
Sbjct: 923  GDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNL-FVCLKDGA 981

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------PGG 1110
            +   +E                   +M E+ Q H+GD+V   +  SLV         P  
Sbjct: 982  ATTDDE-----------------RQQMPEVAQVHLGDMVNVFRHGSLVMENIGERTTPTS 1024

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKD- 1169
            G  V++GTV G++G +    + D  +F   L+ ++      +   DH  +RS +  +K  
Sbjct: 1025 G-CVLFGTVSGAIGLVTQIPA-DYYEFLRKLQENLTDTIKSVGKIDHAYWRSFHTEMKTE 1082

Query: 1170 ----VIDGDLCEQFPTLSLDLQRK 1189
                 IDGDL E F    LDL R+
Sbjct: 1083 RCEGFIDGDLVESF----LDLSRE 1102


>gi|307111604|gb|EFN59838.1| hypothetical protein CHLNCDRAFT_29381 [Chlorella variabilis]
          Length = 1108

 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 288/1220 (23%), Positives = 500/1220 (40%), Gaps = 179/1220 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y ++  +PT +  +  G+F+      +V+++   LE+ R    G ++ ++   ++G +
Sbjct: 12   YNYVVSAHKPTSVQHSAVGHFTAASDLNLVISKSTQLEVHRLTAEG-LQGVLDVPLYGRV 70

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQYL 120
             +L  FR     +D +++ ++  +  +L ++  S  +  + + +   + G R++  GQ  
Sbjct: 71   AALQLFRPASEPRDLLLLLTERNKFCVLGFDEESGELVTRANGDASDRVG-RQVELGQRG 129

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
             VDP+ R  +IG      L  V+  D   R  +            V  I  +D G   P 
Sbjct: 130  IVDPQCR--LIGLHLYDGLFKVIPMDE--RGGLQEAFNMRLDELKVVDIAFLD-GCAAPT 184

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNH-VSRKWSEP-VDNGANMLVTVP 238
             A +  D  E             Q+++  YE+ L     V   W +  +D GA+ML+ VP
Sbjct: 185  IAVLYEDTKE-------------QRHVKTYEVSLREKELVEGPWQQSNLDAGASMLIPVP 231

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRA----DLPAERGVLIVSAATHRQKTL 294
              G    G +V  E+ V +   G     A+ P  A    D    R +L    +       
Sbjct: 232  ASG----GAMVVGESVVTFIAPGVVRSAAIKPTLAYGQVDDDGSRFLL----SDFLGNLY 283

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
               LL+ E       +       V+ LK++     P  +++  L SG +F  S FG+  L
Sbjct: 284  LLLLLREEGAAGASSSSGAGAGAVAGLKLEPLGRTPAASTIAYLDSGVVFVGSSFGDSQL 343

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
             +  +   DP    S   ++++         QP             +L PI+D  + +L 
Sbjct: 344  IRLHSSPPDPSQPTSFVEVLDS---------QP-------------NLGPIVDFAVVDLE 381

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
             +   Q+ T  G G   SLRI+R G+ V E A+ +LPG+   +W+++K   D  D Y+V+
Sbjct: 382  RQGQGQVVTCSGTGVDGSLRIVRNGIGVVEQALVELPGIKD-LWSLRKTFMDAHDTYLVL 440

Query: 475  SFNNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI--REDGR 530
            +F+  T VL +   + ++E    GF  T  +L  +    D L+QV  +  R +       
Sbjct: 441  TFSGETRVLGMNAEDELDEAEIPGFNSTALTLCCANTVHDQLLQVTATAFRLVDCMTQQL 500

Query: 531  INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIA 590
            + +W       I    ++  Q+V A+ G  L+Y E+   GQ+ E  + ++  D+ACLDI 
Sbjct: 501  VTQWEPGADGRITIAAASPTQLVAAVGGRTLVYLELG-DGQIEEKGRVQLDADIACLDIT 559

Query: 591  SVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGED 650
             V E  + S  +AVGS+     I +L P               P S LF + +       
Sbjct: 560  PVGELSEASEVVAVGSWALEAHIFAL-PSLAPLFREKLPTDVIPRSTLFAQFEGDT---- 614

Query: 651  GADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCL 710
                    +L  GL +G L    +D      +D +   LG +P  L +    G AA+   
Sbjct: 615  --------YLMYGLGDGQLVNYRLD--ADGPTDRKKIALGTKPISLRTFRSRGAAAVFAA 664

Query: 711  SSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFN 770
            S RP + Y    + L + L+   + +  SF++    + +      AL + TI+ + +  +
Sbjct: 665  SDRPTVIYSSNRKLLYSNLNENEVSHMTSFNTAAFPDSLALGKQEALLIGTIDEI-QKLH 723

Query: 771  ETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQ 830
               +PL   PRR   Q   +   +                   C +A   GE G+     
Sbjct: 724  VRTVPLGEQPRRIAHQETSRTFAVT------------------CTQATISGEGGD----- 760

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTV 890
                                           +R++D ++      L+LQ +E A S+C+ 
Sbjct: 761  ------------------------------SVRLVDEQTFELLDRLQLQQHELACSLCST 790

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
               D +  T   VGTA    F P          I+     G  L ++ + +  G   +L 
Sbjct: 791  QLGD-DPATYYVVGTA----FAPPNEPEPTKGRIFVLAAAGGKLCVVCEKETRGAVYSLA 845

Query: 951  QFQGRLLAGIGPVLRLYDL-----GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQES 1005
            +FQGRLLAGI   +++Y       G + L+ +C +      +  + T  D + VGD+ +S
Sbjct: 846  EFQGRLLAGINSRVQMYKWLEQGEGGRALVPECSHAGHVLALY-LATRGDLVVVGDLMKS 904

Query: 1006 FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE 1065
                 +  +E  L + A D  P W++A   +D DT  GA+   N++ VR   D + + E 
Sbjct: 905  IQLLAWGEEEGALELRARDFHPNWMSAVTVLDDDTYMGAENSYNLFTVRRNADAATDEER 964

Query: 1066 DPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES-------VIYGT 1118
                              +++E + ++H+G+ V   Q  SLV    +S       V++GT
Sbjct: 965  ------------------SRLETVGRYHLGEFVNRFQPGSLVMRLPDSELSQIPTVLFGT 1006

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS------AYFPVKDVID 1172
            + G +G ++A            L+  MR+    + G DH  +R+         P +  +D
Sbjct: 1007 INGVIG-VVASLPHAQYQLLESLQEAMRKVVKGVGGFDHAQWRAFSNQHMPATPARQFVD 1065

Query: 1173 GDLCEQFPTLSLDLQRKIAD 1192
            GDL EQF    LDL+R  A+
Sbjct: 1066 GDLIEQF----LDLKRDSAE 1081


>gi|302769568|ref|XP_002968203.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
 gi|300163847|gb|EFJ30457.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
          Length = 1089

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 301/1238 (24%), Positives = 527/1238 (42%), Gaps = 185/1238 (14%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            ++ Y +T  +PT +  +  GNF+      +++A+   +E       G ++ L+   I+G 
Sbjct: 3    VWNYVVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEFHLLTAQG-LQPLLDVPIYGR 61

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQY 119
            I +L  FR  G  +D + V ++  +  +L+++  +  +  +   +   + G R    GQ 
Sbjct: 62   IATLELFRPPGETQDVLFVSTERYKFCVLQWDSETTELVTRAMGDVSDRIG-RPTDNGQI 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
              VDP+ R  +IG      L  V+  D   +L  +  +   +   +         G   P
Sbjct: 121  GIVDPECR--LIGLHLYDGLFKVIPIDNKGQLKEAFNIRLEELQVLDIKFL---YGCSKP 175

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTVP 238
              A +  D  +A    T +        +   E D G       WS+  +DNGA ML+ VP
Sbjct: 176  TIAVLYQDNKDARHVKTYE--------IQLKEKDFG----EGPWSQNNLDNGAGMLIPVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
                   GV++  E  ++Y +         IP R  +    G   V A   R      +L
Sbjct: 224  ---TPLGGVIIIGEQTIVYYS---GSAFKAIPIRPSITKAYGK--VDADGSR------YL 269

Query: 299  LQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            L    G +  + + H+ + V  LK++        +S+  L +G ++  S +G+  L +  
Sbjct: 270  LSDHTGSLHLLVITHERDRVLGLKVELLGETSAASSLSYLDNGVVYVGSSYGDSQLIKLN 329

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
            A      V++ +S  +E  E F                    +L PI+D+ + +L  +  
Sbjct: 330  A-----QVDSRNS-YVEVLESFV-------------------NLGPIVDLCVVDLERQGQ 364

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNN 478
             Q+ T  G     SLRI+R G+ ++E A ++L G+   +W+++    D FD ++VVSF +
Sbjct: 365  GQVVTCSGAYKDGSLRIVRNGIGINEQASAELQGI-KGMWSLRATSKDVFDIFLVVSFIS 423

Query: 479  AT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEW 534
             T  L +++ + +EE    GF     +L       D ++QV  + +R +    R  + EW
Sbjct: 424  ETRILAMNMDDELEETEIEGFDSEAQTLFCHNAIHDQIIQVTSTSLRLVDATSRRQLTEW 483

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPE 594
            RTP    I    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI  +  
Sbjct: 484  RTPSAVAINVATANASQVLLATGGGNLVYIEIGR-GSLTEVKHVQLQNEISCLDINPIGT 542

Query: 595  GRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGEDG 651
               RS   AVG + D ++++ SL P+  +++L+ +S+     P S+L    +        
Sbjct: 543  DPDRSNIAAVGMWTDISVQVFSL-PN--LEVLAKESLGGEIIPRSVLICAFEGVS----- 594

Query: 652  ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
                   +L   L +G LF  ++D   GQLSD +   LG +P  L +        +   S
Sbjct: 595  -------YLLCALGDGHLFNFLIDTSNGQLSDRKKISLGTQPIMLRTFRSKNATHVFAAS 647

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
             RP + Y    + L + ++ + + +   F+S    + +       L + TI+ + +  + 
Sbjct: 648  DRPTVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDDI-QKLHI 706

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQM 831
              + L   PRR   Q + +         G  TA                  N NG     
Sbjct: 707  RTVALGEHPRRICHQEQTRTF-------GLCTAR--------------FYSNPNGE---- 741

Query: 832  ENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVN 891
               D E+ +  L D+Q                VL   + +T         E   +I T +
Sbjct: 742  ---DHESHFVKLLDDQ-------------TFEVLGSYNLDTF--------ENGCTIITCS 777

Query: 892  FHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
            F D +  T   VGTA  L   P+ N  + G I I+  VE+GK  +L+ + + +G    L 
Sbjct: 778  FTD-DPATYYCVGTAYAL---PEENEPSKGRILIFT-VEDGK-FQLVTEKETKGAVYNLN 831

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPN---TIVSINTYRDRIYVGDIQESFH 1007
             F G+LLAGI   ++LY   ++   R+ +++   +     + + +  D I VGD+ +S  
Sbjct: 832  AFNGKLLAGINQKIQLYKWTQRDSTRELQSECGHHGHILALYVQSRGDFIVVGDLMKSIS 891

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD-VSDEIEED 1066
               Y+ +E  +   A D    W+TA   +D D   GA+   N++ VR   D  +DE    
Sbjct: 892  LLLYKPEEGAIEERARDYNANWMTAVEILDDDIYLGAENSFNLFTVRKNSDAATDE---- 947

Query: 1067 PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---PGGGES----VIYGTV 1119
                    E+G+L       E + ++H+G+ V   +  SLV   P    S    VI+GTV
Sbjct: 948  --------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDNETSQIPTVIFGTV 992

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGD 1174
             G +G + +   ++  +F   L+  + +    + G  H  +RS          K+ +DGD
Sbjct: 993  NGVIGVVASL-QQEQFNFLQRLQHCLAKVIKGVGGLSHEQWRSFSSERKNADAKNFLDGD 1051

Query: 1175 LCEQFPTLSLDLQRKIADELDRTPG----EILKKLEEI 1208
            L E F    LDL R   DE+         E+ K++EE+
Sbjct: 1052 LIESF----LDLNRAKMDEVSAAMSVSVEELCKRVEEM 1085


>gi|225443992|ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
          Length = 1068

 Score =  249 bits (636), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 292/1242 (23%), Positives = 526/1242 (42%), Gaps = 214/1242 (17%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+G +   +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    VWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR  G  +D++ + ++  +  +L+++   + V  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVITRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q +  D KG+          K  + +  +    L I            +Y       G  
Sbjct: 119  QVIPFDNKGQL---------KEAFNIRLEELQVLDIK----------FLY-------GCS 152

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
             P    +  D  +A    T + A + +            + V   W++  +DNGA++L+ 
Sbjct: 153  KPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWAQNNLDNGADLLIP 200

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GVL+  E  ++Y +         IP R  +    G   V A   R      
Sbjct: 201  VP---PPLCGVLIIGEETIVYCS---ASAFKAIPIRPSITKAYGR--VDADGSR------ 246

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + + H+ E V+ LKI+      + +++  L + +++  S +G+  L +
Sbjct: 247  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAFVYVGSSYGDSQLIK 306

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               I   PD + S   ++E                      +  +L PI+D  + +L  +
Sbjct: 307  ---IHLQPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLERQ 341

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLRI+R G+ ++E A  +L G+   +W+++ + +D  D ++VVSF
Sbjct: 342  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPHDTFLVVSF 400

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GF     +L       D L+QV  S +R +    R   N
Sbjct: 401  ISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELRN 460

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            EW+ P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  D++CLDI  +
Sbjct: 461  EWKAPSGYSVNVATANATQVLLATGGGHLVYLEIG-DGTLTEVKHAQLEYDISCLDINPI 519

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
             E    S+  AVG + D ++RI SL PD  + +++ + +     P S+L    +      
Sbjct: 520  GENPNFSQLAAVGMWTDISVRIFSL-PD--LNLITKEYLGGEIIPRSVLLCSFEGIP--- 573

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G L   +++M TG+L+D +   LG +P  L +        +  
Sbjct: 574  ---------YLLCALGDGHLLNFLLNMSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 624

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + L + ++ + + +   F+S    + +       L + TI+ + +  
Sbjct: 625  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTIGTIDDI-QKL 683

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            +  ++PL    RR   Q + +   I                                   
Sbjct: 684  HIRSIPLGEHARRICHQEQSRTFAICSL-------------------------------- 711

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
                     KY+  S E         D  +  IR+LD ++        L   E   SI +
Sbjct: 712  ---------KYNQSSTE---------DSEMHFIRLLDDQTFEFISTYPLDTFEYGCSILS 753

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             +F D +      VGTA  L   P+ N    G I ++  VE+GK L+L+ + + +G   +
Sbjct: 754  CSFSD-DSNVYYCVGTAYVL---PEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYS 807

Query: 949  LCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGDI 1002
            L  F G+LLA I   ++LY     D G + L  + E+    + + + + T  D I VGD+
Sbjct: 808  LNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSESGHHGHILALYVQTRGDFIVVGDL 865

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
             +S     Y+ +E  +   A D    W++A   +D D   GA+   NI+ VR        
Sbjct: 866  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVR-------- 917

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVI 1115
                      K  +G  +    ++E + ++H+G+ V   +  SLV        G   +VI
Sbjct: 918  ----------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 967

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDV 1170
            +GTV G +G ++A    D   F   L+ ++R+    + G  H  +RS          K+ 
Sbjct: 968  FGTVNGVIG-VIASLPHDQYVFLEKLQANLRKVIKGVGGLSHEQWRSFNNEKKTVDAKNF 1026

Query: 1171 IDGDLCEQFPTLSLDLQRKIADELDRTPG----EILKKLEEI 1208
            +DGDL E F    LDL R   DE+ +       E+ K++EE+
Sbjct: 1027 LDGDLIETF----LDLNRTRMDEISKAMAVSVEELCKRVEEL 1064


>gi|356525401|ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine max]
          Length = 1089

 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 283/1241 (22%), Positives = 524/1241 (42%), Gaps = 191/1241 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+  +   +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR  G  +DY+ + ++  +  +L+++  +  +  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETGELVTRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCS 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
             P    +  D  +A    T + A + +            + V   WS+  +DNGA++L+ 
Sbjct: 174  KPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GVL+  E  ++Y +    +    IP R  +    G +    +         
Sbjct: 222  VP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDPDGSR-------- 267

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + + H+ E V+ LKI+      + +++  L + +++  S +G+  L +
Sbjct: 268  YLLGDHTGLVSLLVIIHEKEKVTGLKIEPLGETSIASTISYLDNAFVYVGSSYGDSQLIK 327

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               +   PD + S   ++E                      +  +L PI+D  + +L  +
Sbjct: 328  ---LNLQPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLERQ 362

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLR++R G+ ++E A  +L G+   +W+++ + +D FD ++VVSF
Sbjct: 363  GQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSF 421

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GF     +L       + L+QV  S +R +    R   N
Sbjct: 422  ISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRDLRN 481

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            EW  P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI  +
Sbjct: 482  EWHAPSGYSVNVATANATQVLLATGGGHLVYLEIG-DGILQEVKHAQLEYEISCLDINPI 540

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
             E    S   AVG + D ++RI SL PD  + +++ + +     P S+L    +      
Sbjct: 541  GENPNHSNLAAVGMWTDISVRIFSL-PD--LSLITKEQLGGEIIPRSVLLCAFEGIS--- 594

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G L   +++  TG+L+D +   LG +P  L +        +  
Sbjct: 595  ---------YLLCALGDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 645

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + L + ++ + + +   F+S    + +       L + TI+ + +  
Sbjct: 646  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKL 704

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            +  ++PL    RR   Q + +   I                                   
Sbjct: 705  HIRSIPLGEHARRICHQEQSRTFAICSL-------------------------------- 732

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
                     KY+P S E         D  +  +R+LD ++        L   E    I +
Sbjct: 733  ---------KYNPASGE---------DSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIIS 774

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             +F D ++     VGTA  L   P+ N    G I ++  VE+GK L+L+ + + +G    
Sbjct: 775  CSFSD-DNNVYYCVGTAYVL---PEENEPTKGRIIVFA-VEDGK-LQLIAEKETKGAVYC 828

Query: 949  LCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
            L  F G+LLA I   ++LY     D G   L  +C +      +  + T  D I VGD+ 
Sbjct: 829  LNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSECGHHGHILALY-VQTRGDFIVVGDLM 887

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            +S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR         
Sbjct: 888  KSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVR--------- 938

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVIY 1116
                     K  +G  +    ++E + ++H+G+ V   +  SLV        G   +VI+
Sbjct: 939  ---------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 989

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVI 1171
            GT+ G +G + +      V F   L+ ++R+    + G  H  +RS          ++ +
Sbjct: 990  GTINGVIGVIASLPHEQYV-FLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVEARNFL 1048

Query: 1172 DGDLCEQFPTLSLDLQRKIADEL----DRTPGEILKKLEEI 1208
            DGDL E F    LDL R   DE+    D +  E+ K++EE+
Sbjct: 1049 DGDLIESF----LDLNRSKMDEISKAVDVSVEELCKRVEEL 1085


>gi|170057515|ref|XP_001864517.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876915|gb|EDS40298.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1138

 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 288/1222 (23%), Positives = 502/1222 (41%), Gaps = 160/1222 (13%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT + A + GNF+ T    ++VA+   LE  L+ PE    +  +    I G I
Sbjct: 5    YIVTAQKPTAVTACVTGNFTSTTDLNLIVAKSSRLEIYLVTPEG---LRPIKEVGINGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN---VFDKIHQETFGKSGCRRIVPGQ 118
              +  FR   +QKD + + +     +IL      +   +  K H     + G +    G 
Sbjct: 62   AVMKLFRPAEAQKDLLFILTHRYNAMILACQVQGDDIEIITKAHGNVADRVG-KPAETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DPK R + +   E    +  L+RDT      S  +E      + +       G  +
Sbjct: 121  LAVIDPKARVIGMRLYEGLFKIIPLDRDTHELKATSLRMEEMHVQDVEFLY-----GTAH 175

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P    I        QD  G+     + NL     D     ++ K  + V+  A ML+ VP
Sbjct: 176  PTLIVIH-------QDLNGRHIKTHEINLK----DKDFTKIAWK-QDNVETEATMLIPVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
                G   +++  E+ V +    +  V   I +++          ++         F +L
Sbjct: 224  TPLGG--AIVIGQESVVYHDGDSYVAVAPAIIKQS---------TINCYARVDSRGFRYL 272

Query: 299  LQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
            L    G +F + LE +        V ++K++    I +   +  L +G LF  S  G+  
Sbjct: 273  LGNMIGHLFMMFLETEENTRGQLTVKDIKVELLGEITIPECITYLDNGVLFIGSRHGDSQ 332

Query: 354  LYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANL 413
            L +     A      +  T+MET                        +L PI+DM I +L
Sbjct: 333  LVKLNTTAA---ASGAYVTVMET----------------------FTNLAPIIDMCIVDL 367

Query: 414  FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE-FDAYI 472
              +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++  ++D  +D  +
Sbjct: 368  ERQGQGQMITCSGSYKEGSLRIIRNGIGIQEHACIDLPGI-KGMWALRVGIDDSPYDNTL 426

Query: 473  VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
            V+SF   T +L + GE VEE    GFL    +   + +    ++QV P   R I  D + 
Sbjct: 427  VLSFVGHTRILMLSGEEVEETEIPGFLSDQQTFYCANVDFGQIIQVTPMTARLISCDNKS 486

Query: 531  -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
             I EW+ P  + I  V  N  Q+V A +  ++ Y E++  G+L+      +  +VACLDI
Sbjct: 487  MICEWKPPDDKRIGVVACNSCQMVCA-TARDIYYIEIE-AGKLVHKSTVTLDYEVACLDI 544

Query: 590  ASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVG 647
            + + E   RS  +AVG +      +   P+  ++ +  + +     P S+L         
Sbjct: 545  SPLDEPATRSELVAVGLWTEISACILRLPN--LEFVHKEKLGGEIIPRSILM-------- 594

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
                A     ++L   L +G +F  VVD  T +L+D +   LG +P  L +        +
Sbjct: 595  ----ACFEGIIYLLCALGDGSMFYFVVDKTTHRLTDQKKVTLGTQPTILKTFRSLSTTNV 650

Query: 708  LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGE 767
               S RP + Y    + + + ++ + + +  S +++   + +     N++ + TI+ + +
Sbjct: 651  FACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYQDSLALATKNSVILGTIDEIQK 710

Query: 768  TFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAAGMGE 822
                T +PL  +PRR   Q   +   +I       D   LT   + A+ +          
Sbjct: 711  LHIRT-VPLGESPRRIAYQEASQTFGVITVRMDIQDSSGLTPSRQSASTQTS------NV 763

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
              + NM  ++ G         S+ ++G      +  V  + ++D  +       +    E
Sbjct: 764  TSSSNMGLLKPG--------ASNTEFG-----QEVEVHNLLIIDQNTFEVLHAHQFMQTE 810

Query: 883  AAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
               S+ +    + +  T   VGTA  +    +R    G I IY + +   +L  + + ++
Sbjct: 811  YVLSLISAKLGN-DPATYYIVGTA--MVNPEEREPKVGRIIIYHYAD--GALTQVSEKEI 865

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGD 1001
            +G   +L +F GR+LA I   +RLY+    + LR  E   F N + +   T  D I VGD
Sbjct: 866  KGACYSLVEFNGRVLATINSTVRLYEWTDDKDLR-LECSHFNNVLALYCKTKGDFILVGD 924

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +  S    +Y++ E      A D  P+W+TA   +D D   GA+   N++          
Sbjct: 925  LMRSITLLQYKQMEGSFEEIARDYQPKWMTAVEILDDDAFLGAENSNNLFVC-------- 976

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------PGGGE 1112
                      +K      +    +M E+ QFH+GD+V   +  SLV         P  G 
Sbjct: 977  ----------LKDSAATTDDERQQMPEVAQFHLGDMVNVFRHGSLVMQNIGERTTPTSG- 1025

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKD--- 1169
             V++GTV G++G +      D  +F   L+ ++      +   DH  +RS +  +K    
Sbjct: 1026 CVLFGTVSGAIGLVTQIPP-DYYEFLRKLQENLTNTIKSVGRIDHTYWRSFHTEMKTENS 1084

Query: 1170 --VIDGDLCEQFPTLSLDLQRK 1189
               IDGDL E F    LDL R+
Sbjct: 1085 EGFIDGDLVESF----LDLTRE 1102


>gi|58383228|ref|XP_312466.2| AGAP002472-PA [Anopheles gambiae str. PEST]
 gi|55242305|gb|EAA08181.2| AGAP002472-PA [Anopheles gambiae str. PEST]
          Length = 1138

 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 296/1233 (24%), Positives = 509/1233 (41%), Gaps = 178/1233 (14%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT + A + GNF+      ++VA+   LE  L+ PE    I+ +    I G I
Sbjct: 5    YIVTAQKPTAVTACVTGNFTSPTDLNLIVAKSSRLEIYLVTPEGLRPIKEI---GINGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN---VFDKIHQETFGKSGCRRIVPGQ 118
              +  FR     KD I + +     +IL+     +   +  K H     + G +    G 
Sbjct: 62   AVMKLFRPAEETKDLIFILTHRYNAMILQCAVQGDDIEIITKAHGNVADRVG-KPAETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DPK R + +   E    +  L++DT      S  +E      + +       G  +
Sbjct: 121  LAVIDPKARVIGMRLYEGLFKIIPLDKDTNELKATSLRMEEMHVQDVEFLY-----GTTH 175

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR-KWSEP-VDNGANMLVT 236
            P    I        QD  G       +++  +E+ L     ++  W +  V+  A ML+ 
Sbjct: 176  PTLIVIH-------QDING-------RHIKTHEISLKDKEFTKIAWKQDNVETEATMLIA 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP    G   +++  E+ V +    +  V   I +++          ++           
Sbjct: 222  VPMPLGG--AIVIGQESIVYHDGDSYVAVAPAIIKQS---------TINCYARIDSKGLR 270

Query: 297  FLLQTEYGDIFKVTLEHDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            +LL    G++F + LE +        V ++K++    I +   +  L +G LF  S  G+
Sbjct: 271  YLLGNMAGNLFMMFLETEENAKGQTTVRDIKVELLGEITIPECITYLDNGVLFIGSRHGD 330

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
              L +      D     +   LMET                        +L PI+DM + 
Sbjct: 331  SQLVKLNTTAGD---NGAYVMLMET----------------------FTNLAPIVDMCVV 365

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE-FDA 470
            +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++  ++D  +D 
Sbjct: 366  DLERQGQGQMITCSGSFKEGSLRIIRNGIGIQEHACIDLPGI-KGMWALRVGIDDSPYDN 424

Query: 471  YIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG 529
             +++SF   T VL + G+ VEE   +G L    +   + +    ++QV PS  R I  D 
Sbjct: 425  TLILSFVGHTRVLMLSGDEVEETEIAGILGDQQTFYCANVSHGQILQVTPSSARLISCDN 484

Query: 530  R--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACL 587
            +  I EW+ P  + I  VG+N  Q+V A S  ++ Y E+   G+L    +  +S +VACL
Sbjct: 485  KAMICEWKPPDNKRIGVVGANTTQIVCA-SAQDVYYVEIG-DGKLEYKGQTTLSYEVACL 542

Query: 588  DIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
            D++ + +   RS F+AVG + +               +S   +  P   LL  E    +G
Sbjct: 543  DVSPLEDNATRSEFVAVGLWTD---------------ISACVLKVPTLELLHKE---KLG 584

Query: 648  GEDGADHPASLFLNA---------GLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
            GE     P S+ + A          L +G ++  V++  TG L++ +   LG +P  L +
Sbjct: 585  GEI---IPRSILMAAFEGINYLLCALGDGSMYYFVLNKATGCLTEQKKVTLGTQPTILKT 641

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
                    +   S RP + Y    + + + ++ + + +  S +++   + +     N++ 
Sbjct: 642  FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAEAYQDSLALATRNSVI 701

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIE-----TDQGALTAEEREAAKK- 812
              TI+ + +    T +PL  +PRR   Q   +   +I       D   LT   + A+ + 
Sbjct: 702  FGTIDEIQKLHIRT-VPLGESPRRIAYQEASQTFGVITFRMDVQDSSGLTPARQSASTQT 760

Query: 813  -ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
                +++GMG    G                 S+ ++G      +  V  + ++D  +  
Sbjct: 761  NNITQSSGMGLLKPG----------------ASNTEFG-----QEVEVHNLLIIDQNTFE 799

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                 +    E A S+ +    + +  T   VGT  GL    +     G I IYR+ +  
Sbjct: 800  VLHAHQFMQTEYALSLMSAKLGN-DPNTYFIVGT--GLVNPEEPEPKTGRIIIYRYAD-- 854

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSI 990
              L+++   +V+G   +L +F GR+LA I   +RLY+    + LR  E   F N + +  
Sbjct: 855  NELKMVSDKEVKGACYSLVEFNGRVLACINSTVRLYEWTDDKDLR-LECSHFNNVLALYC 913

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             T  D I VGD+  S    +Y++ E      A D  P W+TA   +D D   GAD   N+
Sbjct: 914  KTKGDFILVGDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNL 973

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV--- 1107
             FV L    +   EE                   +M E+ QFH+GD+V   +  SLV   
Sbjct: 974  -FVCLKDSAATTDEE-----------------RQQMPEVAQFHLGDMVNVFRHGSLVMQN 1015

Query: 1108 ------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
                  P  G  V++GTV G++G +    S D  +F   L+ ++      +   DH  +R
Sbjct: 1016 ISERSTPTTG-CVLFGTVSGAIGLVTQIQS-DFYEFLRKLQENLTNTIKSVGKIDHSYWR 1073

Query: 1162 SAYFPVK-----DVIDGDLCEQFPTLSLDLQRK 1189
            S +   K       IDGDL E F  LS +  R+
Sbjct: 1074 SFHTETKMERCEGFIDGDLVESFLDLSREKMRE 1106


>gi|302788810|ref|XP_002976174.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
 gi|300156450|gb|EFJ23079.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
          Length = 1089

 Score =  249 bits (635), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 301/1238 (24%), Positives = 526/1238 (42%), Gaps = 185/1238 (14%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            ++ Y +T  +PT +  +  GNF+      +++A+   +E       G ++ L+   I+G 
Sbjct: 3    VWNYVVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEFHLLTAQG-LQPLLDVPIYGR 61

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQY 119
            I +L  FR  G  +D + V ++  +  +L+++  +  +  +   +   + G R    GQ 
Sbjct: 62   IATLELFRPPGETQDVLFVSTERYKFCVLQWDSETTELVTRAMGDVSDRIG-RPTDNGQI 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
              VDP+ R  +IG      L  V+  D   +L  +  +   +   +         G   P
Sbjct: 121  GIVDPECR--LIGLHLYDGLFKVIPIDNKGQLKEAFNIRLEELQVLDIKFL---YGCSKP 175

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTVP 238
              A +  D  +A    T +        +   E D G       W    +DNGA ML+ VP
Sbjct: 176  TIAVLYQDNKDARHVKTYE--------IQLKEKDFG----EGPWLQNNLDNGAGMLIPVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
                   GV++  E  ++Y +         IP R  +    G   V A   R      +L
Sbjct: 224  ---TPLGGVIIIGEQTIVYYS---GSAFKAIPIRPSITKAYGK--VDADGSR------YL 269

Query: 299  LQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            L    G +  + + H+ + V  LK++        +S+  L +G ++  S +G+  L +  
Sbjct: 270  LSDHTGSLHLLVITHERDRVLGLKVELLGETSAASSLSYLDNGVVYVGSSYGDSQLIKLN 329

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
            A      V++ +S  +E  E F                    +L PI+D+ + +L  +  
Sbjct: 330  A-----QVDSRNS-YVEVLESFV-------------------NLGPIVDLCVVDLERQGQ 364

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNN 478
             Q+ T  G     SLRI+R G+ ++E A ++L G+   +W+++    D FD ++VVSF +
Sbjct: 365  GQVVTCSGAYKDGSLRIVRNGIGINEQASAELQGI-KGMWSLRATSKDVFDIFLVVSFIS 423

Query: 479  ATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEW 534
             T +L++   + +EE    GF     +L       D ++QV  + +R +    R  + EW
Sbjct: 424  ETRILAMNMDDELEETEIEGFDSEAQTLFCHNAIHDQIIQVTSTSLRLVDATSRRQLTEW 483

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPE 594
            RTP    I    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI  +  
Sbjct: 484  RTPSGVAINVATANASQVLLATGGGNLVYIEIGR-GSLTEVKHVQLQNEISCLDINPIGT 542

Query: 595  GRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGEDG 651
               RS   AVG + D ++++ SL P+  +++L+ +S+     P S+L    +        
Sbjct: 543  DPDRSNIAAVGMWTDISVQVFSL-PN--LEVLAKESLGGEIIPRSVLICAFEGVS----- 594

Query: 652  ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
                   +L   L +G LF  ++D  TGQLSD +   LG +P  L +        +   S
Sbjct: 595  -------YLLCALGDGHLFNFLIDTSTGQLSDRKKISLGTQPIMLRTFRSKNATHVFAAS 647

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
             RP + Y    + L + ++ + + +   F+S    + +       L + TI+ + +  + 
Sbjct: 648  DRPTVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDDI-QKLHI 706

Query: 772  TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQM 831
              + L   PRR   Q + +         G  TA                  N NG     
Sbjct: 707  RTVALGEHPRRICHQEQTRTF-------GLCTAR--------------FYSNPNGE---- 741

Query: 832  ENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVN 891
               D E+ +  L D+Q                VL   + +T         E   +I T +
Sbjct: 742  ---DHESHFVKLLDDQ-------------TFEVLGSYNLDTF--------ENGCTIITCS 777

Query: 892  FHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFVEEGKSLELLHKTQVEGIPLALC 950
            F D +  T   VGTA  L   P+ N  + G I I+  VE+GK  +L+ + + +G    L 
Sbjct: 778  FTD-DPATYYCVGTAYAL---PEENEPSKGRILIFT-VEDGK-FQLVTEKETKGAVYNLN 831

Query: 951  QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPN---TIVSINTYRDRIYVGDIQESFH 1007
             F G+LLAGI   ++LY   ++   R+ +++   +     + + +  D I VGD+ +S  
Sbjct: 832  AFNGKLLAGINQKIQLYKWTQRDSTRELQSECGHHGHILALYVQSRGDFIVVGDLMKSIS 891

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD-VSDEIEED 1066
               Y+ +E  +   A D    W+TA   +D D   GA+   N++ VR   D  +DE    
Sbjct: 892  LLLYKPEEGAIEERARDYNANWMTAVEILDDDIYLGAENSFNLFTVRKNSDAATDE---- 947

Query: 1067 PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---PGGGES----VIYGTV 1119
                    E+G+L       E + ++H+G+ V   +  SLV   P    S    VI+GTV
Sbjct: 948  --------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDNETSQIPTVIFGTV 992

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGD 1174
             G +G + +   ++  +F   L+  + +    + G  H  +RS          K+ +DGD
Sbjct: 993  NGVIGVVASL-QQEQFNFLQRLQHCLAKVIKGVGGLSHEQWRSFSSERKNADAKNFLDGD 1051

Query: 1175 LCEQFPTLSLDLQRKIADELDRTPG----EILKKLEEI 1208
            L E F    LDL R   DE+         E+ K++EE+
Sbjct: 1052 LIESF----LDLNRAKMDEVSAAMSVSVEELCKRVEEM 1085


>gi|115465791|ref|NP_001056495.1| Os05g0592400 [Oryza sativa Japonica Group]
 gi|48475231|gb|AAT44300.1| putative DNA damage binding protein 1 [Oryza sativa Japonica Group]
 gi|113580046|dbj|BAF18409.1| Os05g0592400 [Oryza sativa Japonica Group]
 gi|215694552|dbj|BAG89545.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222632766|gb|EEE64898.1| hypothetical protein OsJ_19757 [Oryza sativa Japonica Group]
          Length = 1090

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 286/1243 (23%), Positives = 539/1243 (43%), Gaps = 194/1243 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+G     ++VA+   +E  LL P+    ++ ++   I+
Sbjct: 3    VWNYVVTAHKPTSVTHSCVGNFTGPNQLNLIVAKCTRIEIHLLTPQG---LQPMIDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR     +D++ + ++  +  +L+++  K+ +  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHNETQDFLFIATERYKFCVLQWDGEKSELLTRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCV 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
             P    +  D  +A    T + A + +            + V   WS+  +DNGA +L+ 
Sbjct: 174  KPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGAGLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GV++  E  ++Y N  +   RA+  +++         I+ A          
Sbjct: 222  VPAP---LGGVIIIGEETIVYCN-ANSTFRAIPIKQS---------IIRAYGRVDPDGSR 268

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + L H+ E V+ LKI+Y     + +S+  L +G ++  S FG+  L +
Sbjct: 269  YLLGDNAGILHLLVLTHERERVTGLKIEYLGETSIASSISYLDNGVVYVGSRFGDSQLVK 328

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               + ADP+      + +E                    +E+  +L PI+D  + +L  +
Sbjct: 329  LN-LQADPN-----GSYVEV-------------------LERYVNLGPIVDFCVVDLDRQ 363

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLR++R G+ ++E A  +L G+   +W++K + ND +D Y+VVSF
Sbjct: 364  GQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGI-KGLWSLKSSFNDPYDMYLVVSF 422

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GF   T +L      +D L+QV  + +R +    R  ++
Sbjct: 423  ISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVD 482

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            +W  P   ++    +N  QV++A  GG L+Y E+    +L+EV+  ++  +++C+D+  +
Sbjct: 483  QWNAPEGFSVNVASANASQVLLATGGGHLVYLEIK-DSKLVEVKHIQLEHEISCVDLNPI 541

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
             E  + S   AVG + D ++RILSL PD  ++++  +++     P S+L   ++      
Sbjct: 542  GENPQYSSLAAVGMWTDISVRILSL-PD--LELIRKENLGGEIVPRSVLLCTLEGVS--- 595

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G LF  +++  TG+L+D +   LG +P  L +    G   +  
Sbjct: 596  ---------YLLCALGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKGTTHVFA 646

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + L + ++ + + +   F++    + +       L + TI+ + +  
Sbjct: 647  SSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDI-QKL 705

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREA-----AKKECFEAAGMGENG 824
            +   +PL    RR   Q + + +          + EE E         + FE   + +  
Sbjct: 706  HIRTIPLNEQARRICHQEQSRTLAFCSFKHNQTSIEESETHFVRLLDHQTFEFLSIYQ-- 763

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
               +DQ E+G                          C                       
Sbjct: 764  ---LDQYEHG--------------------------C----------------------- 771

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFVEEGKSLELLHKTQVE 943
             SI + +F D ++     VGTA  L   P+ N  + G I ++  VE+G+ L+L+ + + +
Sbjct: 772  -SIISCSFSD-DNNVYYCVGTAYVL---PEENEPSKGRILVFA-VEDGR-LQLIVEKETK 824

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDL-----GKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            G   +L  F G+LLA I   ++LY       G   L  +C +      + +  T  D I 
Sbjct: 825  GAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSECGHHGHILALYT-QTRGDFIV 883

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+ +S     Y+ +E+ +   A D    W++A   +D +   GA+   NI+ VR   D
Sbjct: 884  VGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNSD 943

Query: 1059 -VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGG 1110
              +DE            E+G+L       E + ++H+G+ V  L+  SLV        G 
Sbjct: 944  AATDE------------ERGRL-------EVVGEYHLGEFVNRLRHGSLVMRLPDSEMGQ 984

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY-----F 1165
              +VI+GT+ G +G + +      V F   L+  + +    +    H  +RS +      
Sbjct: 985  IPTVIFGTINGVIGIIASLPHEQYV-FLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTS 1043

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
              ++ +DGDL E F  LS +   ++A  +     E+ K++EE+
Sbjct: 1044 EARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSKRVEEL 1086


>gi|349580241|dbj|GAA25401.1| K7_Rse1p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 1361

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 214/848 (25%), Positives = 403/848 (47%), Gaps = 130/848 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF----SGTK--TPEIVVARGKVLELLRPENSGRIETLVS 54
           +YLY LTL++ T  + +  G+F    +G+K    ++ VA    LEL    + G ++ +  
Sbjct: 58  LYLYHLTLKKQTNFVHSCIGHFVDLEAGSKREQSQLCVATETHLELYDTAD-GELKLIAK 116

Query: 55  TE-IFGAIRSLAQFRL--TGSQKD------YIVVGSDSGRIVILEYNPSKNVF--DKIHQ 103
            + +F  I S+    L  +GS+        ++ + SDSG + I++       F    +  
Sbjct: 117 FQNLFATITSMKSLDLPHSGSRAKASNWPTFLALTSDSGNLSIVQIIMHAGAFRLKTLVN 176

Query: 104 ETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSH 163
           +   ++  RR+ P  Y+ +DP GR +++ + E+ KL +++  D A +L ISSPLE  + H
Sbjct: 177 QPLTRTTLRRVSPISYMEIDPNGRCIILSSVEQNKLCFLV--DYAQKLRISSPLEIIRPH 234

Query: 164 TIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW 223
            +   +  +D  F+NP F  +E+D           AA++   +L FY L+LGLNH+ +K 
Sbjct: 235 MVTLDMAVVDVNFNNPCFVTLEID----------NAATQLSVHLIFYVLELGLNHIVKKA 284

Query: 224 SEPVDNGANMLVTVP-------------GGGDGPSG------VLVCAENFVIYKN-QGHP 263
              V+  AN ++++P                D          V++  EN ++ K+  G  
Sbjct: 285 DYLVNPSANFVLSLPDLSRYNITTSLSENNYDADYDTLFNPFVVIGFENHILVKDMNGFF 344

Query: 264 DVRAVIPRRADLPA-ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE-- 320
            ++  IP+R+   +  + V I+S    + K  FF LLQ+ +GD+FK+T+  D    +   
Sbjct: 345 SLKVEIPKRSITDSRHKNVTIISGIVQKLKNDFFVLLQSNHGDLFKLTVSPDTNDRNRPL 404

Query: 321 LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGF 380
           +++ YFDTI  +  + + K+GYLFA SE  N+ L+QF+ +G + +  ++ ST   +++  
Sbjct: 405 VQLSYFDTIQNSHQLHIFKNGYLFALSEMNNNFLFQFEKLGVEKNDFSNVST---SKDPN 461

Query: 381 QPVFFQPR-GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
           + + F+P   L+NL  + Q  +L P +  +I +    ++P +         + +  L   
Sbjct: 462 KSLVFEPSIKLQNLSILSQQLNLNPSIKSQIVS----DSP-LSIATKHFTNNKIITLTNA 516

Query: 440 LAVSEMAVSQLPGVPSAVWTV-KKNVNDEFDAYIVVSFNNATLVLSI-GETVEEV----- 492
           +  S +  + LP   + +W +       + +  + ++F   T++L I  E++EE+     
Sbjct: 517 VNYSNLISTGLPPNATKLWLIPDPATTGDNNTLLFITFPKKTMILQIDNESMEELTPDEA 576

Query: 493 SDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----EWRTPGKRTIVKVG 546
           + S F L    ++   L+G  S++QV  + +RHI   G+        W  P    IV   
Sbjct: 577 TRSAFKLSQDTTIHTCLMGSHSIIQVCTAELRHIVPTGKSRYSNKLTWVPPAGIRIVCAT 636

Query: 547 SNRLQVVIALSGGELIYFEVDMTG-QLLEVEKH----EMSGDVACLDIASVPEGRKRSRF 601
           S++ Q++I+LS  EL+YF++D++   L+E+  H     M   VA      + +  + +  
Sbjct: 637 SSKTQLIISLSNYELVYFKIDVSSDSLIELTTHPELDTMPSKVA------IVQDTQHADL 690

Query: 602 LAVGSYDNTIRILSL--DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
           LA+   +  I+I+SL    +D + ++S+Q VS     ++ +   +S+G          L 
Sbjct: 691 LAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVR-DSSIG---------QLN 740

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL-----FSVVVGGR---------- 704
           L+ GL+NGV  +  +  V G  +D + RFLGL+P  L      SV +             
Sbjct: 741 LHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLREISVSLNNEEEEEEEEDDD 800

Query: 705 ----------------AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVE 747
                           + ++C SS  W+ Y  +  + +  L  + +   + F ++D  + 
Sbjct: 801 DEKEEEEKNSSGAKWMSCVVCHSSSTWVSYTWKNVWTIRQLKDQNMLSCSKFVNADVAIN 860

Query: 748 GVVSVAGN 755
           GV S++ +
Sbjct: 861 GVCSISSS 868



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 154/342 (45%), Gaps = 69/342 (20%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK--CENKLFPNTIVSIN 991
            +ELLH+T++     A+ +F+  LL  +G  + LY LGKK+LLR+   +  +    IVS++
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMD 1078

Query: 992  TYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             +  +R+ VGDI ES     +    N    F DDSV R +T    +D  T+ GAD++GN 
Sbjct: 1079 QWNYERLAVGDIHESVTLFIWDPAGNVFIPFVDDSVKRHVTVLKFLDEATVIGADRYGNA 1138

Query: 1051 YFVRLPQD----VSDEIEEDPTGGKIKWE------QGKLNGAPN------KMEEIVQFHV 1094
            + +R P +    +S+    + + G IK+       Q KL   PN      K + +  F V
Sbjct: 1139 WTLRSPPECEKIMSNHDPSELSNGAIKYPLDVITLQQKL---PNTYDCKFKFQLLNHFFV 1195

Query: 1095 GDVVTSLQKA-SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE----------- 1142
             D++T      SL        IY  + G++G  +   S+ +V    ++E           
Sbjct: 1196 NDIITDFHILDSLSNSDRPGCIYMGLQGTVGCFIPLLSKGNVFMMGNIENIMAEADDTFY 1255

Query: 1143 ---------MHMRQEHP-------------------------PLCGRDHMAYRSAYFPVK 1168
                      +MR+E                            + GRDH  YRS Y PV 
Sbjct: 1256 LDYESRKKNNNMRKEDDEEESGSVVLQGRHGIEDEIICEGSCSILGRDHQEYRSYYAPVG 1315

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGE-ILKKLEEIR 1209
             VIDGDLCE F  LSL+ Q  +A  L     E I++ + E+R
Sbjct: 1316 KVIDGDLCENFLRLSLNEQEFLAKNLKSVQVEDIIQTINEVR 1357


>gi|15235577|ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
 gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA damage-binding protein 1a; AltName: Full=UV-damaged
            DNA-binding protein 1a; Short=DDB1a
 gi|7267302|emb|CAB81084.1| UV-damaged DNA binding factor-like protein [Arabidopsis thaliana]
 gi|25054828|gb|AAN71904.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
 gi|332657117|gb|AEE82517.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
          Length = 1088

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 292/1244 (23%), Positives = 524/1244 (42%), Gaps = 204/1244 (16%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT +  +  GNF+  +   ++VA+   +E  LL P+    ++ ++   I+G I
Sbjct: 6    YVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQG---LQPMLDVPIYGRI 62

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQYL 120
             +L  FR  G  +D++ + ++  +  +L+++P S  +  +   +   + G R    GQ  
Sbjct: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDPESSELITRAMGDVSDRIG-RPTDNGQIG 121

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARL--TISSPLEAHKSHTIVYSICGIDCGFDN 178
             +DP  R  +IG      L  V+  D   +L    +  LE  +   I +       G   
Sbjct: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLF-----GCAK 174

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSE-PVDNGANMLVT 236
            P  A +  D  +A             +++  YE+ L   + V   WS+  +DNGA++L+ 
Sbjct: 175  PTIAVLYQDNKDA-------------RHVKTYEVSLKDKDFVEGPWSQNSLDNGADLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GVL+  E  ++Y +         IP R  +    G + V  +         
Sbjct: 222  VP---PPLCGVLIIGEETIVYCS---ASAFKAIPIRPSITKAYGRVDVDGSR-------- 267

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G I  + + H+ E V+ LKI+      + +++  L +  +F  S +G+  L +
Sbjct: 268  YLLGDHAGMIHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVFVGSSYGDSQLVK 327

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               +   PD + S   ++E                      +  +L PI+D  + +L  +
Sbjct: 328  ---LNLHPDAKGSYVEVLE----------------------RYINLGPIVDFCVVDLERQ 362

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLR++R G+ ++E A  +L G+   +W++K ++++ FD ++VVSF
Sbjct: 363  GQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGI-KGMWSLKSSIDEAFDTFLVVSF 421

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GFL    +L       + L+QV  + +R +    R   +
Sbjct: 422  ISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRD 481

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            EW  P   T+    +N  QV++A  GG L+Y E+   G+L EV+   +  +V+CLDI  +
Sbjct: 482  EWHAPAGFTVNVATANASQVLLATGGGHLVYLEIG-DGKLTEVQHALLEYEVSCLDINPI 540

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
             +    S+  AVG + D ++RI SL                 PE  L L  +  +GGE  
Sbjct: 541  GDNPNYSQLAAVGMWTDISVRIFSL-----------------PE--LTLITKEQLGGE-- 579

Query: 652  ADHPASLFLNA---------GLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
               P S+ L A          L +G L    +D  TGQL D +   LG +P  L +    
Sbjct: 580  -IIPRSVLLCAFEGISYLLCALGDGHLLNFQMDTTTGQLKDRKKVSLGTQPITLRTFSSK 638

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
                +   S RP + Y    + L + ++ + + +   F+S    + +       L + TI
Sbjct: 639  SATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTI 698

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            + + +  +   +PL    RR   Q + +                        F    +G 
Sbjct: 699  DDI-QKLHIRTIPLGEHARRICHQEQTR-----------------------TFGICSLGN 734

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
              N    +M                              +R+LD ++        L   E
Sbjct: 735  QSNSEESEMH----------------------------FVRLLDDQTFEFMSTYPLDSFE 766

Query: 883  AAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQ 941
               SI + +F + ++     VGTA  L   P+ N    G I ++  VE+G+ L+L+ + +
Sbjct: 767  YGCSILSCSFTEDKN-VYYCVGTAYVL---PEENEPTKGRILVF-IVEDGR-LQLIAEKE 820

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDR 996
             +G   +L  F G+LLA I   ++LY     D G + L  +C +      +  + T  D 
Sbjct: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDF 879

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+   N+  V+  
Sbjct: 880  IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVK-- 937

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP-------G 1109
                            K  +G  +    ++E + ++H+G+ V   +  SLV        G
Sbjct: 938  ----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIG 981

Query: 1110 GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AY 1164
               +VI+GTV G +G ++A   ++   F   L+  +R+    + G  H  +RS       
Sbjct: 982  QIPTVIFGTVNGVIG-VIASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRT 1040

Query: 1165 FPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
               ++ +DGDL E F  LS +    I+  ++    E+ K++EE+
Sbjct: 1041 AEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEEL 1084


>gi|224061051|ref|XP_002300334.1| predicted protein [Populus trichocarpa]
 gi|222847592|gb|EEE85139.1| predicted protein [Populus trichocarpa]
          Length = 1088

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 283/1239 (22%), Positives = 523/1239 (42%), Gaps = 188/1239 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+ ++   +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    VWNYVVTAHKPTNVTHSCVGNFTSSQELNLIIAKCTRIEINLLTPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR  G  +D++ + ++  +  +L+++  +  +  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLH---GCS 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
             P    +  D  +A    T + A + +            + +   WS+  +DNGA++L+ 
Sbjct: 174  KPTIVVLYQDNKDARHVKTYEVALKDK------------DFIEGPWSQNNLDNGADLLIP 221

Query: 237  VPGGGDGP--SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            VP     P   GVL+  E  ++Y +    +V   IP R  +    G   V A   R    
Sbjct: 222  VP-----PPFCGVLIIGEETIVYCS---ANVFRAIPIRPSITKAYGR--VDADGSR---- 267

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
              +LL    G +  + + H+ E V+ LKI+      + +++  L + ++F  S +G+  L
Sbjct: 268  --YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAFVFIGSSYGDSQL 325

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
             +   +   PD +    T +E                    +++  +L PI+D  + +L 
Sbjct: 326  VK---LNLHPDAKG---TYVEV-------------------LDRYVNLGPIVDFCVVDLE 360

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
             +   Q+ T  G     SLRI+R G+ ++E A  +L G+   +W+++   +D FD ++VV
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSLTDDPFDTFLVV 419

Query: 475  SFNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR-- 530
            SF + T  L ++I + +EE    GF     +L       + L+QV  S +R +    R  
Sbjct: 420  SFISETRILAMNIEDELEETEIEGFCSQVQTLFCHCAVFNQLVQVTSSSVRLVSSTTREL 479

Query: 531  INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIA 590
              EW  P   +I    +N  QV++A  GG L+Y E+   G L + +  ++  +++CLDI 
Sbjct: 480  RQEWNAPSGYSINVATANATQVLLATGGGHLVYLEIG-DGTLTQAKHAQLECEISCLDIN 538

Query: 591  SVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVG 647
             + E    S+  AVG + D ++RI SL PD  + +++ + +     P S+L    +    
Sbjct: 539  PIGENPNYSQLAAVGMWTDISVRIFSL-PD--LNLITKEPLGGEIIPRSVLLCSFEGIA- 594

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
                       +L   L +G L   ++++ TG L D +   LG +P  L +        +
Sbjct: 595  -----------YLLCALGDGHLLNFLLNLSTGGLKDRKKVSLGTQPITLRTFSSKNTTHV 643

Query: 708  LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGE 767
               S RP + Y    + L + ++ + + +   F+S    + +       L + TI+ + +
Sbjct: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELSIGTIDDI-Q 702

Query: 768  TFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGN 827
              +  ++PL    RR   Q + +                        F    M    N  
Sbjct: 703  KLHIRSIPLGEHARRICHQEQSR-----------------------TFSICSMKNQSNAE 739

Query: 828  MDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
              +M                              IR+LD ++        L   E   SI
Sbjct: 740  ESEMH----------------------------FIRLLDDQTFEFISTYPLDTFEYGCSI 771

Query: 888  CTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIP 946
             + +F D +      VGTA  L   P+ N    G I ++  VE+GK L+L+ + + +G  
Sbjct: 772  LSCSFSD-DSNVYYCVGTAYVL---PEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAV 825

Query: 947  LALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
             +L  F G+LLA I   ++LY     D G + L  +C +      +  + T  D I VGD
Sbjct: 826  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGD 884

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            + +S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR       
Sbjct: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------- 937

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESV 1114
                       K  +G  +    ++E + ++H+G+ V   +  SLV        G   +V
Sbjct: 938  -----------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 986

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKD 1169
            I+GTV G +G + +      + F   L+ ++R+    + G  H  +RS          K+
Sbjct: 987  IFGTVNGVIGVIASLPHEQYL-FLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVDAKN 1045

Query: 1170 VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
             +DGDL E F  LS     +I+  ++ +  E+ K++EE+
Sbjct: 1046 FLDGDLIESFLDLSRSRMDEISKAMEISVEELCKRVEEL 1084


>gi|392297537|gb|EIW08637.1| Rse1p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 1332

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 212/847 (25%), Positives = 401/847 (47%), Gaps = 130/847 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF----SGTK--TPEIVVARGKVLELLRPENSGRIETLVS 54
           +YLY LTL++ T  + +  G+F    +G+K    ++ VA    LEL    + G ++ +  
Sbjct: 29  LYLYHLTLKKQTNFVHSCIGHFVDLEAGSKREQSQLCVATETHLELYDTAD-GELKLIAK 87

Query: 55  TE-IFGAIRSLAQFRL--TGSQKD------YIVVGSDSGRIVILE--YNPSKNVFDKIHQ 103
            + +F  I S+    L  +GS+        ++ + SDSG + I++   +        +  
Sbjct: 88  FQNLFATITSMKSLDLPHSGSRAKASNWPTFLALTSDSGNLSIVQIIMHAGALRLKTLVN 147

Query: 104 ETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSH 163
           +   ++  RR+ P  Y+ +DP GR +++ + E+ KL +++  D A +L ISSPLE  + H
Sbjct: 148 QPLTRTTLRRVSPISYMEIDPNGRCIILSSVEQNKLCFLV--DYAQKLRISSPLEIIRPH 205

Query: 164 TIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW 223
            +   +  +D  F+NP F  +E+D           AA++   +L FY L+LGLNH+ +K 
Sbjct: 206 MVTLDMAVVDVNFNNPCFVTLEID----------NAATQLSVHLIFYVLELGLNHIVKKA 255

Query: 224 SEPVDNGANMLVTVP-------------GGGDGPSG------VLVCAENFVIYKN-QGHP 263
              V+  AN ++++P                D          V++  EN ++ K+  G  
Sbjct: 256 DYLVNPSANFVLSLPDLSRYNITTSLSDNNYDADYDTLFNPFVVIGFENHILVKDMNGFF 315

Query: 264 DVRAVIPRRADLPA-ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE-- 320
            ++  IP+R+   +  + V I+S    + K  FF LLQ+ +GD+FK+T+  D    +   
Sbjct: 316 SLKVEIPKRSITNSRHKNVTIISGIVQKLKNDFFVLLQSNHGDLFKLTVSPDTNDRNRPL 375

Query: 321 LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGF 380
           +++ YFDTI  +  + + K+GYLFA SE  N+ L+QF+ +G + +     S ++ +++  
Sbjct: 376 VQLSYFDTIQNSHQLHIFKNGYLFALSEMNNNFLFQFEKLGVEKN---DFSNVLTSKDPN 432

Query: 381 QPVFFQPR-GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
           + + F+P   L+NL  + Q  +L P +  +I +    ++P +         + +  L   
Sbjct: 433 KSLVFEPSIKLQNLSILSQQLNLNPSIKSQIVS----DSP-LSIATKHFTNNKIITLTNA 487

Query: 440 LAVSEMAVSQLPGVPSAVWTV-KKNVNDEFDAYIVVSFNNATLVLSI-GETVEEV----- 492
           +  S +  + LP   + +W +       + +  + ++F   T++L I  E++EE+     
Sbjct: 488 VNYSNLISTSLPPNATKLWLIPDPATTGDNNTLLFITFPKKTMILQIDNESMEELTPDEA 547

Query: 493 SDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----EWRTPGKRTIVKVG 546
           + S F L    ++   L+G  S++QV  + +RHI   G+        W  P    IV   
Sbjct: 548 TRSAFKLSQDTTIHTCLMGSHSIIQVCTAELRHIVPTGKSRYSNKLTWVPPAGIRIVCAT 607

Query: 547 SNRLQVVIALSGGELIYFEVDMTG-QLLEVEKH----EMSGDVACLDIASVPEGRKRSRF 601
           S++ Q++I+LS  EL+YF++D++   L+E+  H     M   VA      + +  + +  
Sbjct: 608 SSKTQLIISLSNYELVYFKIDVSSDSLIELTTHPELDTMPSKVA------IVQDTQHADL 661

Query: 602 LAVGSYDNTIRILSL--DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
           LA+   +  I+I+SL    +D + ++S+Q VS     ++ +   +S+G          L 
Sbjct: 662 LAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVR-DSSIG---------QLN 711

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL-----FSVVVGGR---------- 704
           L+ GL+NGV  +  +  V G  +D + RFLGL+P  L      SV +             
Sbjct: 712 LHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLREISVSLNNEEEEEEEEDDD 771

Query: 705 ----------------AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVE 747
                           + ++C SS  W+ Y  +  + +  L  + +   + F ++D  + 
Sbjct: 772 DEKEEEEINSSGAKWMSCVVCHSSSTWVSYTWKNVWTIRQLKDQNMLSCSKFVNADVAIN 831

Query: 748 GVVSVAG 754
           GV S++ 
Sbjct: 832 GVCSISS 838



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 155/342 (45%), Gaps = 69/342 (20%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK--CENKLFPNTIVSIN 991
            +ELLH+T++     A+ +F+  LL  +G  + LY LGKK+LLR+   +  +    IVS++
Sbjct: 990  IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1049

Query: 992  TYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             +  +R+ VGDI ES     +    N    + DDSV R +T    +D  T+ GAD++GN 
Sbjct: 1050 QWNYERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRYGNA 1109

Query: 1051 YFVRLPQD----VSDEIEEDPTGGKIKWE------QGKLNGAPN------KMEEIVQFHV 1094
            + +R P +    +S+    + + G IK+       Q KL   PN      K + +  F V
Sbjct: 1110 WTLRSPPECEKIMSNHDPSELSNGAIKYPLDVITLQQKL---PNTYDCKFKFQLLNHFFV 1166

Query: 1095 GDVVTSLQKA-SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE----------- 1142
             D++T      SL        IY  + G++G  +   S+ +V    ++E           
Sbjct: 1167 NDIITDFHILDSLSNSDRPGCIYMGLQGTVGCFIPLLSKGNVFMMGNIENIMAEADDTFY 1226

Query: 1143 ---------MHMRQEHP-------------------------PLCGRDHMAYRSAYFPVK 1168
                      +MR+E                            + GRDH  YRS Y PV+
Sbjct: 1227 LDYESRKKNNNMRKEDDEEESGSVVLQGRHGIEDEIICEGSCSILGRDHQEYRSYYAPVR 1286

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGE-ILKKLEEIR 1209
             VIDGDLCE F  LSL+ Q  +A  L     E I++ + E+R
Sbjct: 1287 KVIDGDLCENFLRLSLNEQEFLAKNLKSVQVEDIIQTINEVR 1328


>gi|323336187|gb|EGA77458.1| Rse1p [Saccharomyces cerevisiae Vin13]
          Length = 1332

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 212/847 (25%), Positives = 401/847 (47%), Gaps = 130/847 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF----SGTK--TPEIVVARGKVLELLRPENSGRIETLVS 54
           +YLY LTL++ T  + +  G+F    +G+K    ++ VA    LEL    + G ++ +  
Sbjct: 29  LYLYHLTLKKQTNFVHSCIGHFVDLEAGSKREQSQLCVATETHLELYDTAD-GELKLIAK 87

Query: 55  TE-IFGAIRSLAQFRL--TGSQKD------YIVVGSDSGRIVILE--YNPSKNVFDKIHQ 103
            + +F  I S+    L  +GS+        ++ + SDSG + I++   +        +  
Sbjct: 88  FQNLFATITSMKSLDLPHSGSRAKASNWPTFLALTSDSGNLSIVQIIMHAGALRLKTLVN 147

Query: 104 ETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSH 163
           +   ++  RR+ P  Y+ +DP GR +++ + E+ KL +++  D A +L ISSPLE  + H
Sbjct: 148 QPLTRTTLRRVSPISYMEIDPNGRCIILSSVEQNKLCFLV--DYAQKLRISSPLEIIRPH 205

Query: 164 TIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW 223
            +   +  +D  F+NP F  +E+D           AA++   +L FY L+LGLNH+ +K 
Sbjct: 206 MVTLDMAVVDVNFNNPCFVTLEID----------NAATQLSVHLIFYVLELGLNHIVKKA 255

Query: 224 SEPVDNGANMLVTVP-------------GGGDGPSG------VLVCAENFVIYKN-QGHP 263
              V+  AN ++++P                D          V++  EN ++ K+  G  
Sbjct: 256 DYLVNPSANFVLSLPDLSRYNITTSLSDNNYDADYDTLFNPFVVIGFENHILVKDMNGFF 315

Query: 264 DVRAVIPRRADLPA-ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE-- 320
            ++  IP+R+   +  + V I+S    + K  FF LLQ+ +GD+FK+T+  D    +   
Sbjct: 316 SLKVEIPKRSITNSRHKNVTIISGIVQKLKNDFFVLLQSNHGDLFKLTVSPDTNDRNRPL 375

Query: 321 LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGF 380
           +++ YFDTI  +  + + K+GYLFA SE  N+ L+QF+ +G + +     S ++ +++  
Sbjct: 376 VQLSYFDTIQNSHQLHIFKNGYLFALSEMNNNFLFQFEKLGVEKN---DFSNVLTSKDPN 432

Query: 381 QPVFFQPR-GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
           + + F+P   L+NL  + Q  +L P +  +I +    ++P +         + +  L   
Sbjct: 433 KSLVFEPSIKLQNLSILSQQLNLNPSIKSQIVS----DSP-LSIATXHFTNNKIITLTNA 487

Query: 440 LAVSEMAVSQLPGVPSAVWTV-KKNVNDEFDAYIVVSFNNATLVLSI-GETVEEV----- 492
           +  S +  + LP   + +W +       + +  + ++F   T++L I  E++EE+     
Sbjct: 488 VNYSNLISTSLPPNATKLWLIPDPATTGDNNTLLFITFPKKTMILQIDNESMEELTPDEA 547

Query: 493 SDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----EWRTPGKRTIVKVG 546
           + S F L    ++   L+G  S++QV  + +RHI   G+        W  P    IV   
Sbjct: 548 TRSAFKLSQDTTIHTCLMGSHSIIQVCTAELRHIVPTGKSRYSNKLTWVPPAGIRIVCAT 607

Query: 547 SNRLQVVIALSGGELIYFEVDMTG-QLLEVEKH----EMSGDVACLDIASVPEGRKRSRF 601
           S++ Q++I+LS  EL+YF++D++   L+E+  H     M   VA      + +  + +  
Sbjct: 608 SSKTQLIISLSNYELVYFKIDVSSDSLIELTTHPELDTMPSKVA------IVQDTQHADL 661

Query: 602 LAVGSYDNTIRILSL--DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
           LA+   +  I+I+SL    +D + ++S+Q VS     ++ +   +S+G          L 
Sbjct: 662 LAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVR-DSSIG---------QLN 711

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL-----FSVVVGGR---------- 704
           L+ GL+NGV  +  +  V G  +D + RFLGL+P  L      SV +             
Sbjct: 712 LHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLREISVSLNNEEEEEEEEDDD 771

Query: 705 ----------------AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVE 747
                           + ++C SS  W+ Y  +  + +  L  + +   + F ++D  + 
Sbjct: 772 DEKEEEEINSSGAKWMSCVVCHSSSTWVSYTWKNVWTIRQLKDQNMLSCSKFVNADVAIN 831

Query: 748 GVVSVAG 754
           GV S++ 
Sbjct: 832 GVCSISS 838



 Score =  116 bits (291), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 154/342 (45%), Gaps = 69/342 (20%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK--CENKLFPNTIVSIN 991
            +ELLH+T++     A+ +F+  LL  +G  + LY LGKK+LLR+   +  +    IVS++
Sbjct: 990  IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1049

Query: 992  TYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             +  +R+ VGDI ES     +    N      DDSV R +T    +D  T+ GAD++GN 
Sbjct: 1050 QWNYERLAVGDIHESVTLFIWDPAGNVFIPXVDDSVKRHVTVLKFLDEATVIGADRYGNA 1109

Query: 1051 YFVRLPQD----VSDEIEEDPTGGKIKWE------QGKLNGAPN------KMEEIVQFHV 1094
            + +R P +    +S+    + + G IK+       Q KL   PN      K + +  F V
Sbjct: 1110 WTLRSPPECEKIMSNHDPSELSNGAIKYPLDVITLQQKL---PNTYDCKFKFQLLNHFFV 1166

Query: 1095 GDVVTSLQKA-SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE----------- 1142
             D++T      SL        IY  + G++G  +   S+ +V    ++E           
Sbjct: 1167 NDIITDFHILDSLSNSDRPGCIYMGLQGTVGCFIPLLSKGNVFMMGNIENIMAEADDTFY 1226

Query: 1143 ---------MHMRQEHP-------------------------PLCGRDHMAYRSAYFPVK 1168
                      +MR+E                            + GRDH  YRS Y PV+
Sbjct: 1227 LDYESRKKNNNMRKEDDEEESGSVVLQGRHGIEDEIICEGSCSILGRDHQEYRSYYAPVR 1286

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGE-ILKKLEEIR 1209
             VIDGDLCE F  LSL+ Q  +A  L     E I++ + E+R
Sbjct: 1287 KVIDGDLCENFLRLSLNEQEFLAKNLKSVQVEDIIQTINEVR 1328


>gi|151946117|gb|EDN64348.1| pre-spliceosome component [Saccharomyces cerevisiae YJM789]
          Length = 1361

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 212/848 (25%), Positives = 402/848 (47%), Gaps = 130/848 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF----SGTK--TPEIVVARGKVLELLRPENSGRIETLVS 54
           +YLY LTL++ T  + +  G+F    +G+K    ++ VA    LEL    + G ++ +  
Sbjct: 58  LYLYHLTLKKQTNFVHSCIGHFVDLEAGSKREQSQLCVATETHLELYDTAD-GELKLIAK 116

Query: 55  TE-IFGAIRSLAQFRL--TGSQKD------YIVVGSDSGRIVILE--YNPSKNVFDKIHQ 103
            + +F  I S+    L  +GS+        ++ + SDSG + I++   +        +  
Sbjct: 117 FQNLFATITSMKSLDLPHSGSRAKASNWPTFLALTSDSGNLSIVQIIMHAGALRLKTLVN 176

Query: 104 ETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSH 163
           +   ++  RR+ P  Y+ +DP GR +++ + E+ KL +++  D A +L ISSPLE  + H
Sbjct: 177 QPLTRTTLRRVSPISYMEIDPNGRCIILSSVEQNKLCFLV--DYAQKLRISSPLEIIRPH 234

Query: 164 TIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW 223
            +   +  +D  F+NP F  +E+D           AA++   +L FY L+LGLNH+ +K 
Sbjct: 235 MVTLDMAVVDVNFNNPCFVTLEID----------NAATQLSVHLIFYVLELGLNHIVKKA 284

Query: 224 SEPVDNGANMLVTVP-------------GGGDGPSG------VLVCAENFVIYKN-QGHP 263
              V+  AN ++++P                D          V++  EN ++ K+  G  
Sbjct: 285 DYLVNPSANFVLSLPDLSRYNITTSLSDNNYDADYDTLFNPFVVIGFENHILVKDMNGFF 344

Query: 264 DVRAVIPRRADLPA-ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE-- 320
            ++  IP+R+   +  + V I+S    + K  FF LLQ+ +GD+FK+T+  D    +   
Sbjct: 345 SLKVEIPKRSITDSRHKNVTIISGIVQKLKNDFFVLLQSNHGDLFKLTVSPDTNDRNRPL 404

Query: 321 LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGF 380
           +++ YFDTI  +  + + K+GYLFA SE  N+ L+QF+ +G + +     S ++ +++  
Sbjct: 405 VQLSYFDTIQNSHQLHIFKNGYLFALSEMNNNFLFQFEKLGVEKN---DFSNVLTSKDPN 461

Query: 381 QPVFFQPR-GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
           + + F+P   L+NL  + Q  +L P +  +I +    ++P +         + +  L   
Sbjct: 462 KSLVFEPSIKLQNLSILSQQLNLNPSIKSQIVS----DSP-LSIATKHFTNNKIITLTNA 516

Query: 440 LAVSEMAVSQLPGVPSAVWTV-KKNVNDEFDAYIVVSFNNATLVLSI-GETVEEV----- 492
           +  S +  + LP   + +W +       + +  + ++F   T++L I  E++EE+     
Sbjct: 517 VNYSNLISTSLPPNATKLWLIPDPATTGDNNTLLFITFPKKTMILQIDNESMEELTPDEA 576

Query: 493 SDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----EWRTPGKRTIVKVG 546
           + S F L    ++   L+G  S++QV  + +RHI   G+        W  P    IV   
Sbjct: 577 TRSAFKLSQDTTIHTCLMGSHSIIQVCTAELRHIVPTGKSRYSNKLTWVPPAGIRIVCAT 636

Query: 547 SNRLQVVIALSGGELIYFEVDMTG-QLLEVEKH----EMSGDVACLDIASVPEGRKRSRF 601
           S++ Q++I+LS  EL+YF++D++   L+E+  H     M   VA      + +  + +  
Sbjct: 637 SSKTQLIISLSNYELVYFKIDVSSDSLIELTTHPELDTMPSKVA------IVQDTQHADL 690

Query: 602 LAVGSYDNTIRILSL--DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
           LA+   +  I+I+SL    +D + ++S+Q VS     ++ +   +S+G          L 
Sbjct: 691 LAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVR-DSSIG---------QLN 740

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL-----FSVVVGGR---------- 704
           L+ GL+NGV  +  +  V G  +D + RFLGL+P  L      SV +             
Sbjct: 741 LHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLREISVSLNNEEEEEEEEDDD 800

Query: 705 ----------------AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVE 747
                           + ++C SS  W+ Y  +  + +  L  + +   + F ++D  + 
Sbjct: 801 DEKEEEEINSSGAKWMSCVVCHSSSTWVSYTWKNVWTIRQLKDQNMLSCSKFVNADVAIN 860

Query: 748 GVVSVAGN 755
           GV S++ +
Sbjct: 861 GVCSISSS 868



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 155/342 (45%), Gaps = 69/342 (20%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK--CENKLFPNTIVSIN 991
            +ELLH+T++     A+ +F+  LL  +G  + LY LGKK+LLR+   +  +    IVS++
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1078

Query: 992  TYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             +  +R+ VGDI ES     +    N    + DDSV R +T    +D  T+ GAD++GN 
Sbjct: 1079 QWNYERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRYGNA 1138

Query: 1051 YFVRLPQD----VSDEIEEDPTGGKIKWE------QGKLNGAPN------KMEEIVQFHV 1094
            + +R P +    +S+    + + G IK+       Q KL   PN      K + +  F V
Sbjct: 1139 WTLRSPPECEKIMSNHDPSELSNGAIKYPLDVITLQQKL---PNTYDCKFKFQLLNHFFV 1195

Query: 1095 GDVVTSLQKA-SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE----------- 1142
             D++T      SL        IY  + G++G  +   S+ +V    ++E           
Sbjct: 1196 NDIITDFHILDSLSNSDRPGCIYMGLQGTVGCFIPLLSKGNVFMMGNIENIMAEADDTFY 1255

Query: 1143 ---------MHMRQEHP-------------------------PLCGRDHMAYRSAYFPVK 1168
                      +MR+E                            + GRDH  YRS Y PV+
Sbjct: 1256 LDYESRKKNNNMRKEDDEEESGSVVLQGRHGIEDEIICEGSCSILGRDHQEYRSYYAPVR 1315

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGE-ILKKLEEIR 1209
             VIDGDLCE F  LSL+ Q  +A  L     E I++ + E+R
Sbjct: 1316 KVIDGDLCENFLRLSLNEQEFLAKNLKSVQVEDIIQTINEVR 1357


>gi|365763701|gb|EHN05227.1| Rse1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1361

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 212/847 (25%), Positives = 401/847 (47%), Gaps = 130/847 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF----SGTK--TPEIVVARGKVLELLRPENSGRIETLVS 54
           +YLY LTL++ T  + +  G+F    +G+K    ++ VA    LEL    + G ++ +  
Sbjct: 58  LYLYHLTLKKQTNFVHSCIGHFVDLEAGSKREQSQLCVATETHLELYDTAD-GELKLIAK 116

Query: 55  TE-IFGAIRSLAQFRL--TGSQKD------YIVVGSDSGRIVILE--YNPSKNVFDKIHQ 103
            + +F  I S+    L  +GS+        ++ + SDSG + I++   +        +  
Sbjct: 117 FQNLFATITSMKSLDLPHSGSRAKASNWPTFLALTSDSGNLSIVQIIMHAGALRLKTLVN 176

Query: 104 ETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSH 163
           +   ++  RR+ P  Y+ +DP GR +++ + E+ KL +++  D A +L ISSPLE  + H
Sbjct: 177 QPLTRTTLRRVSPISYMEIDPNGRCIILSSVEQNKLCFLV--DYAQKLRISSPLEIIRPH 234

Query: 164 TIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW 223
            +   +  +D  F+NP F  +E+D           AA++   +L FY L+LGLNH+ +K 
Sbjct: 235 MVTLDMAVVDVNFNNPCFVTLEID----------NAATQLSVHLIFYVLELGLNHIVKKA 284

Query: 224 SEPVDNGANMLVTVP-------------GGGDGPSG------VLVCAENFVIYKN-QGHP 263
              V+  AN ++++P                D          V++  EN ++ K+  G  
Sbjct: 285 DYLVNPSANFVLSLPDLSRYNITTSLSDNNYDADYDTLFNPFVVIGFENHILVKDMNGFF 344

Query: 264 DVRAVIPRRADLPA-ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE-- 320
            ++  IP+R+   +  + V I+S    + K  FF LLQ+ +GD+FK+T+  D    +   
Sbjct: 345 SLKVEIPKRSITNSRHKNVTIISGIVQKLKNDFFVLLQSNHGDLFKLTVSPDTNDRNRPL 404

Query: 321 LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGF 380
           +++ YFDTI  +  + + K+GYLFA SE  N+ L+QF+ +G + +     S ++ +++  
Sbjct: 405 VQLSYFDTIQNSHQLHIFKNGYLFALSEMNNNFLFQFEKLGVEKN---DFSNVLTSKDPN 461

Query: 381 QPVFFQPR-GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
           + + F+P   L+NL  + Q  +L P +  +I +    ++P +         + +  L   
Sbjct: 462 KSLVFEPSIKLQNLSILSQQLNLNPSIKSQIVS----DSP-LSIATKHFTNNKIITLTNA 516

Query: 440 LAVSEMAVSQLPGVPSAVWTV-KKNVNDEFDAYIVVSFNNATLVLSI-GETVEEV----- 492
           +  S +  + LP   + +W +       + +  + ++F   T++L I  E++EE+     
Sbjct: 517 VNYSNLISTSLPPNATKLWLIPDPATTGDNNTLLFITFPKKTMILQIDNESMEELTPDEA 576

Query: 493 SDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----EWRTPGKRTIVKVG 546
           + S F L    ++   L+G  S++QV  + +RHI   G+        W  P    IV   
Sbjct: 577 TRSAFKLSQDTTIHTCLMGSHSIIQVCTAELRHIVPTGKSRYSNKLTWVPPAGIRIVCAT 636

Query: 547 SNRLQVVIALSGGELIYFEVDMTG-QLLEVEKH----EMSGDVACLDIASVPEGRKRSRF 601
           S++ Q++I+LS  EL+YF++D++   L+E+  H     M   VA      + +  + +  
Sbjct: 637 SSKTQLIISLSNYELVYFKIDVSSDSLIELTTHPELDTMPSKVA------IVQDTQHADL 690

Query: 602 LAVGSYDNTIRILSL--DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
           LA+   +  I+I+SL    +D + ++S+Q VS     ++ +   +S+G          L 
Sbjct: 691 LAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVR-DSSIG---------QLN 740

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL-----FSVVVGGR---------- 704
           L+ GL+NGV  +  +  V G  +D + RFLGL+P  L      SV +             
Sbjct: 741 LHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLREISVSLNNEEEEEEEEDDD 800

Query: 705 ----------------AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVE 747
                           + ++C SS  W+ Y  +  + +  L  + +   + F ++D  + 
Sbjct: 801 DEKEEEEINSSGAKWMSCVVCHSSSTWVSYTWKNVWTIRQLKDQNMLSCSKFVNADVAIN 860

Query: 748 GVVSVAG 754
           GV S++ 
Sbjct: 861 GVCSISS 867



 Score =  119 bits (299), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 155/342 (45%), Gaps = 69/342 (20%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK--CENKLFPNTIVSIN 991
            +ELLH+T++     A+ +F+  LL  +G  + LY LGKK+LLR+   +  +    IVS++
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1078

Query: 992  TYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             +  +R+ VGDI ES     +    N    F DDSV R +T    +D  T+ GAD++GN 
Sbjct: 1079 QWNYERLAVGDIHESVTLFIWDPAGNVFIPFVDDSVKRHVTVLKFLDEATVIGADRYGNA 1138

Query: 1051 YFVRLPQD----VSDEIEEDPTGGKIKWE------QGKLNGAPN------KMEEIVQFHV 1094
            + +R P +    +S+    + + G IK+       Q KL   PN      K + +  F V
Sbjct: 1139 WTLRSPPECEKIMSNHDPSELSNGAIKYPLDVITLQQKL---PNTYDCKFKFQLLNHFFV 1195

Query: 1095 GDVVTSLQKA-SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE----------- 1142
             D++T      SL        IY  + G++G  +   S+ +V    ++E           
Sbjct: 1196 NDIITDFHILDSLSNSDRPGCIYMGLQGTVGCFIPLLSKGNVFMMGNIENIMAEADDTFY 1255

Query: 1143 ---------MHMRQEHP-------------------------PLCGRDHMAYRSAYFPVK 1168
                      +MR+E                            + GRDH  YRS Y PV+
Sbjct: 1256 LDYESRKKNNNMRKEDDEEESGSVVLQGRHGIEDEIICEGSCSILGRDHQEYRSYYAPVR 1315

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGE-ILKKLEEIR 1209
             VIDGDLCE F  LSL+ Q  +A  L     E I++ + E+R
Sbjct: 1316 KVIDGDLCENFLRLSLNEQEFLAKNLKSVQVEDIIQTINEVR 1357


>gi|259148530|emb|CAY81775.1| Rse1p [Saccharomyces cerevisiae EC1118]
          Length = 1361

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 212/848 (25%), Positives = 402/848 (47%), Gaps = 130/848 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF----SGTK--TPEIVVARGKVLELLRPENSGRIETLVS 54
           +YLY LTL++ T  + +  G+F    +G+K    ++ VA    LEL    + G ++ +  
Sbjct: 58  LYLYHLTLKKQTNFVHSCIGHFVDLEAGSKREQSQLCVATETHLELYDTAD-GELKLIAK 116

Query: 55  TE-IFGAIRSLAQFRL--TGSQKD------YIVVGSDSGRIVILE--YNPSKNVFDKIHQ 103
            + +F  I S+    L  +GS+        ++ + SDSG + I++   +        +  
Sbjct: 117 FQNLFATITSMKSLDLPHSGSRAKASNWPTFLALTSDSGNLSIVQIIMHAGALRLKTLVN 176

Query: 104 ETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSH 163
           +   ++  RR+ P  Y+ +DP GR +++ + E+ KL +++  D A +L ISSPLE  + H
Sbjct: 177 QPLTRTTLRRVSPISYMEIDPNGRCIILSSVEQNKLCFLV--DYAQKLRISSPLEIIRPH 234

Query: 164 TIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW 223
            +   +  +D  F+NP F  +E+D           AA++   +L FY L+LGLNH+ +K 
Sbjct: 235 MVTLDMAVVDVNFNNPCFVTLEID----------NAATQLSVHLIFYVLELGLNHIVKKA 284

Query: 224 SEPVDNGANMLVTVP-------------GGGDGPSG------VLVCAENFVIYKN-QGHP 263
              V+  AN ++++P                D          V++  EN ++ K+  G  
Sbjct: 285 DYLVNPSANFVLSLPDLSRYNITTSLSDNNYDADYDTLFNPFVVIGFENHILVKDMNGFF 344

Query: 264 DVRAVIPRRADLPA-ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE-- 320
            ++  IP+R+   +  + V I+S    + K  FF LLQ+ +GD+FK+T+  D    +   
Sbjct: 345 SLKVEIPKRSITNSRHKNVTIISGIVQKLKNDFFVLLQSNHGDLFKLTVSPDTNDRNRPL 404

Query: 321 LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGF 380
           +++ YFDTI  +  + + K+GYLFA SE  N+ L+QF+ +G + +     S ++ +++  
Sbjct: 405 VQLSYFDTIQNSHQLHIFKNGYLFALSEMNNNFLFQFEKLGVEKN---DFSNVLTSKDPN 461

Query: 381 QPVFFQPR-GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
           + + F+P   L+NL  + Q  +L P +  +I +    ++P +         + +  L   
Sbjct: 462 KSLVFEPSIKLQNLSILSQQLNLNPSIKSQIVS----DSP-LSIATKHFTNNKIITLTNA 516

Query: 440 LAVSEMAVSQLPGVPSAVWTV-KKNVNDEFDAYIVVSFNNATLVLSI-GETVEEV----- 492
           +  S +  + LP   + +W +       + +  + ++F   T++L I  E++EE+     
Sbjct: 517 VNYSNLISTSLPPNATKLWLIPDPATTGDNNTLLFITFPKKTMILQIDNESMEELTPDEA 576

Query: 493 SDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----EWRTPGKRTIVKVG 546
           + S F L    ++   L+G  S++QV  + +RHI   G+        W  P    IV   
Sbjct: 577 TRSAFKLSQDTTIHTCLMGSHSIIQVCTAELRHIVPTGKSRYSNKLTWVPPAGIRIVCAT 636

Query: 547 SNRLQVVIALSGGELIYFEVDMTG-QLLEVEKH----EMSGDVACLDIASVPEGRKRSRF 601
           S++ Q++I+LS  EL+YF++D++   L+E+  H     M   VA      + +  + +  
Sbjct: 637 SSKTQLIISLSNYELVYFKIDVSSDSLIELTTHPELDTMPSKVA------IVQDTQHADL 690

Query: 602 LAVGSYDNTIRILSL--DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
           LA+   +  I+I+SL    +D + ++S+Q VS     ++ +   +S+G          L 
Sbjct: 691 LAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVR-DSSIG---------QLN 740

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL-----FSVVVGGR---------- 704
           L+ GL+NGV  +  +  V G  +D + RFLGL+P  L      SV +             
Sbjct: 741 LHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLREISVSLNNEEEEEEEEDDD 800

Query: 705 ----------------AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVE 747
                           + ++C SS  W+ Y  +  + +  L  + +   + F ++D  + 
Sbjct: 801 DEKEEEEINSSGAKWMSCVVCHSSSTWVSYTWKNVWTIRQLKDQNMLSCSKFVNADVAIN 860

Query: 748 GVVSVAGN 755
           GV S++ +
Sbjct: 861 GVCSISSS 868



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 152/339 (44%), Gaps = 63/339 (18%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK--CENKLFPNTIVSIN 991
            +ELLH+T++     A+ +F+  LL  +G  + LY LGKK+LLR+   +  +    IVS++
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1078

Query: 992  TYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             +  +R+ VGDI ES     +    N    F DDSV R +T    +D  T+ GAD++GN 
Sbjct: 1079 QWNYERLAVGDIHESVTLFIWDPAGNVFIPFVDDSVKRHVTVLKFLDEATVIGADRYGNA 1138

Query: 1051 YFVRLPQD----VSDEIEEDPTGGKIKWEQGKLN---GAPN------KMEEIVQFHVGDV 1097
            + +R P +    +S+    + + G IK+    L      PN      K + +  F V D+
Sbjct: 1139 WTLRSPPECEKIMSNHDPSELSNGAIKYPLDVLTLQQKLPNTYDCKFKFQLLNHFFVNDI 1198

Query: 1098 VTSLQKA-SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ--------- 1147
            +T      SL        IY  + G++G  +   S+ +V    ++E  M +         
Sbjct: 1199 ITDFHILDSLSNSDRPGCIYMGLQGTVGCFIPLLSKGNVFMMGNIENIMAEADDTFYLDY 1258

Query: 1148 -----------------------------EHPPLC-------GRDHMAYRSAYFPVKDVI 1171
                                         E   +C       GRDH  YRS Y PV+ VI
Sbjct: 1259 ESRKKNNTMRKEDDEEESGSVVLQGRHGIEDEIICEGSCSILGRDHQEYRSYYAPVRKVI 1318

Query: 1172 DGDLCEQFPTLSLDLQRKIADELDRTPGE-ILKKLEEIR 1209
            DGDLCE F  LSL+ Q  +A  L     E I++ + E+R
Sbjct: 1319 DGDLCENFLRLSLNEQEFLAKNLKSVQVEDIIQTINEVR 1357


>gi|6323592|ref|NP_013663.1| Rse1p [Saccharomyces cerevisiae S288c]
 gi|2497090|sp|Q04693.1|RSE1_YEAST RecName: Full=Pre-mRNA-splicing factor RSE1; AltName: Full=RNA
           splicing and ER to Golgi transport factor 1; AltName:
           Full=Spliceosome-associated protein 130
 gi|642306|emb|CAA87825.1| unknown [Saccharomyces cerevisiae]
 gi|190408196|gb|EDV11461.1| pre-mRNA splicing factor RSE1 [Saccharomyces cerevisiae RM11-1a]
 gi|256271284|gb|EEU06357.1| Rse1p [Saccharomyces cerevisiae JAY291]
 gi|285813955|tpg|DAA09850.1| TPA: Rse1p [Saccharomyces cerevisiae S288c]
          Length = 1361

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 212/847 (25%), Positives = 401/847 (47%), Gaps = 130/847 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF----SGTK--TPEIVVARGKVLELLRPENSGRIETLVS 54
           +YLY LTL++ T  + +  G+F    +G+K    ++ VA    LEL    + G ++ +  
Sbjct: 58  LYLYHLTLKKQTNFVHSCIGHFVDLEAGSKREQSQLCVATETHLELYDTAD-GELKLIAK 116

Query: 55  TE-IFGAIRSLAQFRL--TGSQKD------YIVVGSDSGRIVILE--YNPSKNVFDKIHQ 103
            + +F  I S+    L  +GS+        ++ + SDSG + I++   +        +  
Sbjct: 117 FQNLFATITSMKSLDLPHSGSRAKASNWPTFLALTSDSGNLSIVQIIMHAGALRLKTLVN 176

Query: 104 ETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSH 163
           +   ++  RR+ P  Y+ +DP GR +++ + E+ KL +++  D A +L ISSPLE  + H
Sbjct: 177 QPLTRTTLRRVSPISYMEIDPNGRCIILSSVEQNKLCFLV--DYAQKLRISSPLEIIRPH 234

Query: 164 TIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW 223
            +   +  +D  F+NP F  +E+D           AA++   +L FY L+LGLNH+ +K 
Sbjct: 235 MVTLDMAVVDVNFNNPCFVTLEID----------NAATQLSVHLIFYVLELGLNHIVKKA 284

Query: 224 SEPVDNGANMLVTVP-------------GGGDGPSG------VLVCAENFVIYKN-QGHP 263
              V+  AN ++++P                D          V++  EN ++ K+  G  
Sbjct: 285 DYLVNPSANFVLSLPDLSRYNITTSLSDNNYDADYDTLFNPFVVIGFENHILVKDMNGFF 344

Query: 264 DVRAVIPRRADLPA-ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE-- 320
            ++  IP+R+   +  + V I+S    + K  FF LLQ+ +GD+FK+T+  D    +   
Sbjct: 345 SLKVEIPKRSITNSRHKNVTIISGIVQKLKNDFFVLLQSNHGDLFKLTVSPDTNDRNRPL 404

Query: 321 LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGF 380
           +++ YFDTI  +  + + K+GYLFA SE  N+ L+QF+ +G + +     S ++ +++  
Sbjct: 405 VQLSYFDTIQNSHQLHIFKNGYLFALSEMNNNFLFQFEKLGVEKN---DFSNVLTSKDPN 461

Query: 381 QPVFFQPR-GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
           + + F+P   L+NL  + Q  +L P +  +I +    ++P +         + +  L   
Sbjct: 462 KSLVFEPSIKLQNLSILSQQLNLNPSIKSQIVS----DSP-LSIATKHFTNNKIITLTNA 516

Query: 440 LAVSEMAVSQLPGVPSAVWTV-KKNVNDEFDAYIVVSFNNATLVLSI-GETVEEV----- 492
           +  S +  + LP   + +W +       + +  + ++F   T++L I  E++EE+     
Sbjct: 517 VNYSNLISTSLPPNATKLWLIPDPATTGDNNTLLFITFPKKTMILQIDNESMEELTPDEA 576

Query: 493 SDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----EWRTPGKRTIVKVG 546
           + S F L    ++   L+G  S++QV  + +RHI   G+        W  P    IV   
Sbjct: 577 TRSAFKLSQDTTIHTCLMGSHSIIQVCTAELRHIVPTGKSRYSNKLTWVPPAGIRIVCAT 636

Query: 547 SNRLQVVIALSGGELIYFEVDMTG-QLLEVEKH----EMSGDVACLDIASVPEGRKRSRF 601
           S++ Q++I+LS  EL+YF++D++   L+E+  H     M   VA      + +  + +  
Sbjct: 637 SSKTQLIISLSNYELVYFKIDVSSDSLIELTTHPELDTMPSKVA------IVQDTQHADL 690

Query: 602 LAVGSYDNTIRILSL--DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
           LA+   +  I+I+SL    +D + ++S+Q VS     ++ +   +S+G          L 
Sbjct: 691 LAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVR-DSSIG---------QLN 740

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL-----FSVVVGGR---------- 704
           L+ GL+NGV  +  +  V G  +D + RFLGL+P  L      SV +             
Sbjct: 741 LHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLREISVSLNNEEEEEEEEDDD 800

Query: 705 ----------------AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVE 747
                           + ++C SS  W+ Y  +  + +  L  + +   + F ++D  + 
Sbjct: 801 DEKEEEEINSSGAKWMSCVVCHSSSTWVSYTWKNVWTIRQLKDQNMLSCSKFVNADVAIN 860

Query: 748 GVVSVAG 754
           GV S++ 
Sbjct: 861 GVCSISS 867



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 155/342 (45%), Gaps = 69/342 (20%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK--CENKLFPNTIVSIN 991
            +ELLH+T++     A+ +F+  LL  +G  + LY LGKK+LLR+   +  +    IVS++
Sbjct: 1019 IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 1078

Query: 992  TYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             +  +R+ VGDI ES     +    N    + DDSV R +T    +D  T+ GAD++GN 
Sbjct: 1079 QWNYERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRYGNA 1138

Query: 1051 YFVRLPQD----VSDEIEEDPTGGKIKWE------QGKLNGAPN------KMEEIVQFHV 1094
            + +R P +    +S+    + + G IK+       Q KL   PN      K + +  F V
Sbjct: 1139 WTLRSPPECEKIMSNHDPSELSNGAIKYPLDVITLQQKL---PNTYDCKFKFQLLNHFFV 1195

Query: 1095 GDVVTSLQKA-SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE----------- 1142
             D++T      SL        IY  + G++G  +   S+ +V    ++E           
Sbjct: 1196 NDIITDFHILDSLSNSDRPGCIYMGLQGTVGCFIPLLSKGNVFMMGNIENIMAEADDTFY 1255

Query: 1143 ---------MHMRQEHP-------------------------PLCGRDHMAYRSAYFPVK 1168
                      +MR+E                            + GRDH  YRS Y PV+
Sbjct: 1256 LDYESRKKNNNMRKEDDEEESGSVVLQGRHGIEDEIICEGSCSILGRDHQEYRSYYAPVR 1315

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGE-ILKKLEEIR 1209
             VIDGDLCE F  LSL+ Q  +A  L     E I++ + E+R
Sbjct: 1316 KVIDGDLCENFLRLSLNEQEFLAKNLKSVQVEDIIQTINEVR 1357


>gi|21357503|ref|NP_650257.1| piccolo [Drosophila melanogaster]
 gi|74872881|sp|Q9XYZ5.1|DDB1_DROME RecName: Full=DNA damage-binding protein 1; Short=D-DDB1; AltName:
            Full=Damage-specific DNA-binding protein 1; AltName:
            Full=Protein piccolo
 gi|4928452|gb|AAD33592.1|AF132145_1 damage-specific DNA binding protein DDBa p127 subunit [Drosophila
            melanogaster]
 gi|7299719|gb|AAF54901.1| piccolo [Drosophila melanogaster]
 gi|220942640|gb|ACL83863.1| DDB1-PA [synthetic construct]
          Length = 1140

 Score =  246 bits (627), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 301/1249 (24%), Positives = 523/1249 (41%), Gaps = 192/1249 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +++AR   +E  L+ PE    +  L    I G I
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG---LRPLKEININGTI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP--GQY 119
              +  FR   S KD + + +    ++ILE     +V   + +     S    I    G  
Sbjct: 62   AVMRHFRPPDSNKDLLFILTRRYNVMILEARMVNDVITVVTKANGNVSDSVGIPSEGGVI 121

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPK R  +IG C  Q L  ++  D  A    ++ L   + +  VY +  +  G  NP
Sbjct: 122  AAIDPKAR--VIGMCLYQGLFTIIPMDKDASELKATNLRMDELN--VYDVEFLH-GCLNP 176

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTVP 238
                I        +DS G+     + NL   E       +   W +  V+  A ML+ VP
Sbjct: 177  TVIVIH-------KDSDGRHVKSHEINLRDKEF------MKIAWKQDNVETEATMLIPVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL---- 294
                   GV+V     ++Y +    +  AV P                 T RQ T+    
Sbjct: 224  S---PIGGVIVIGRESIVYHDGS--NYHAVAP----------------LTFRQSTINCYA 262

Query: 295  ------FFFLLQTEYGDIFKVTL----EHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
                    +LL    G ++ + L          V ++K++    I +   +  L +G+L+
Sbjct: 263  RVSSNGLRYLLGNMDGQLYMLFLGTAETSKGVTVKDIKVEQLGEISIPECITYLDNGFLY 322

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
              +  G+  L +  +   D                             +V +E   +L P
Sbjct: 323  IGARHGDSQLVRLNSEAIDGSY--------------------------VVPVENFTNLAP 356

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            I+D+ + +L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W++K  V
Sbjct: 357  ILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSLKVGV 415

Query: 465  NDE-FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
            ++  ++  +V++F   T +L++ GE VEE    GF     +   S +  D L+QV    +
Sbjct: 416  DESPYENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSV 475

Query: 523  RHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
            R +    +  + EWR  G RTI  V  N  Q+++A S  ++ Y  ++  G L E  +  +
Sbjct: 476  RLVSSATKALVAEWRPTGDRTIGVVSCNTTQILVA-SACDIFYIVIE-DGSLREQSRRTL 533

Query: 581  SGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESL 637
            + +VACLDI  + E +K+S  +AVG + D +  ILSL PD  ++ +  + +S    P S+
Sbjct: 534  AYEVACLDITPLDETQKKSDLVAVGLWTDISAVILSL-PD--LETIYTEKLSGEIIPRSI 590

Query: 638  LFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
            L    +          H    +L   L +G ++  ++D  TGQL+D +   LG +P  L 
Sbjct: 591  LMTTFEGI--------H----YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLR 638

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
            +        +   S RP + Y    + + + ++ + + +  S ++    + +     NA+
Sbjct: 639  TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANKNAV 698

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
             + TI+ + +    T +PL   PRR   Q   +   +       +    R  AK     A
Sbjct: 699  ILGTIDEIQKLHIRT-VPLGEGPRRIAYQESSQTFAV---STLRIDVHGRGGAKPLRNSA 754

Query: 818  AGMGEN-------------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRV 864
            +   +N             GN      E G + + ++ L  +Q  +    + ++V+    
Sbjct: 755  STQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQFVA---- 810

Query: 865  LDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHI 924
              P + ++    +L D+   + +               V T+  +   P+  +  G I I
Sbjct: 811  --PETISSLMSAKLGDDPNTYYV---------------VATSLVIPEEPEPKV--GRIII 851

Query: 925  YRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP 984
            + + E    L  + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N    
Sbjct: 852  FHYHE--NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECN--IQ 907

Query: 985  NTIVS--INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMA 1042
            N I +  +    D I VGD+  S    ++++ E      A D  P+W+ A   +D DT  
Sbjct: 908  NMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFL 967

Query: 1043 GADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQ 1102
            G++  GN++  +  +D +   +E+                   + E+ +FH+GD V   +
Sbjct: 968  GSETNGNLFVCQ--KDSAATTDEE----------------RQLLPELARFHLGDTVNVFR 1009

Query: 1103 KASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLC 1153
              SLV         P  G  V+YGT  G++G +     +D  DF   LE  +++    + 
Sbjct: 1010 HGSLVMQNVGERTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKSVG 1067

Query: 1154 GRDHMAYR-----SAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
              +H  YR     S   P +  IDGDL E F  LS D  R     L+ T
Sbjct: 1068 KIEHTYYRNFQINSKVEPSEGFIDGDLIESFLDLSRDKMRDAVQGLELT 1116


>gi|312283457|dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]
          Length = 1088

 Score =  246 bits (627), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 294/1244 (23%), Positives = 524/1244 (42%), Gaps = 204/1244 (16%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT +  +  GNF+  +   ++VA+   +E  LL P+    ++ ++   ++G I
Sbjct: 6    YVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQG---LQPMLDVPMYGRI 62

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQYL 120
             +L  FR  G  +D++ + ++  +  +L+++  S  +  +   +   + G R    GQ  
Sbjct: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIG 121

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARL--TISSPLEAHKSHTIVYSICGIDCGFDN 178
             +DP  R  +IG      L  V+  D   +L    +  LE  +   I +       G   
Sbjct: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLF-----GCAK 174

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSEP-VDNGANMLVT 236
            P  A +  D  +A             +++  YE+ L   + V   WS+  +DNGA++L+ 
Sbjct: 175  PTIAVLYQDNKDA-------------RHVKTYEVSLKDKDFVEGPWSQNNLDNGADLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GVL+  E  ++Y +    +    IP R  +    G + V  +         
Sbjct: 222  VP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDVDGSR-------- 267

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G I  + + H+ E V+ LKI+      + +++  L +  +F  S +G+  L +
Sbjct: 268  YLLGDHAGLIHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVFVGSSYGDSQLVK 327

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               +   PD + S   ++E                      +  +L PI+D  + +L  +
Sbjct: 328  ---LNLHPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLERQ 362

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLRI+R G+ ++E A  +L G+   +W++K ++++ FD ++VVSF
Sbjct: 363  GQGQVVTCSGAFKDGSLRIVRNGIGINEQASVELQGI-KGMWSLKSSIDEAFDTFLVVSF 421

Query: 477  NNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T VL++   + +EE    GFL    +L       + L+QV  + +R +    R   +
Sbjct: 422  ISETRVLAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRD 481

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            EW  P   T+    +N  QV++A  GG L+Y E+   G+L EV+   +  +V+CLDI  +
Sbjct: 482  EWHAPAGFTVNVATANASQVLLATGGGHLVYLEIG-DGKLTEVQHAVLEYEVSCLDINPI 540

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
             +    S+  +VG + D ++RI SL                 PE  L L  +  +GGE  
Sbjct: 541  GDNPNYSQLASVGMWTDISVRIFSL-----------------PE--LTLITKEQLGGE-- 579

Query: 652  ADHPASLFLNA---------GLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
               P S+ L A          L +G L    +D  TGQL D +   LG +P  L +    
Sbjct: 580  -IIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTTTGQLKDRKKVSLGTQPITLRTFSSK 638

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
                +   S RP + Y    + L + ++ + + +   F+S    + +       L + TI
Sbjct: 639  NATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTI 698

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            + + +  +   +PL    RR   Q + +                        F    +G 
Sbjct: 699  DDI-QKLHIRTIPLGEHARRICHQEQTR-----------------------TFGICSLGN 734

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
              N    +M                              +R+LD +S        L   E
Sbjct: 735  QTNAEESEMH----------------------------FVRLLDDQSFEFVSTYPLDAFE 766

Query: 883  AAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQ 941
               SI + +F D ++     VGTA  L   P+ N    G I ++  VE+GK L+L+ + +
Sbjct: 767  YGCSILSCSFADDKN-VYYCVGTAYVL---PEENEPTKGRILVF-IVEDGK-LQLIAEKE 820

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDR 996
             +G   +L  F G+LLA I   ++LY     D G + L  +C +      +  + T  D 
Sbjct: 821  TKGSVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDF 879

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+   N+  V+  
Sbjct: 880  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVK-- 937

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP-------G 1109
                            K  +G  +    ++E + ++H+G+ V   +  SLV        G
Sbjct: 938  ----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIG 981

Query: 1110 GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AY 1164
               +VI+GTV G +G ++A   ++   F   L+  +R+    + G  H  +RS       
Sbjct: 982  QIPTVIFGTVNGVIG-VIASLPQEQYMFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRT 1040

Query: 1165 FPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
               ++ +DGDL E F  LS +    I+  ++    E+ K++EE+
Sbjct: 1041 AEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEEL 1084


>gi|297809743|ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp. lyrata]
 gi|297318592|gb|EFH49014.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp. lyrata]
          Length = 1088

 Score =  245 bits (626), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 291/1244 (23%), Positives = 524/1244 (42%), Gaps = 204/1244 (16%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT +  +  GNF+  +   ++VA+   +E  LL P+    ++ ++   I+G I
Sbjct: 6    YVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQG---LQPMLDVPIYGRI 62

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQYL 120
             +L  FR  G  +D++ + ++  +  +L+++  S  +  +   +   + G R    GQ  
Sbjct: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIG 121

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARL--TISSPLEAHKSHTIVYSICGIDCGFDN 178
             +DP  R  +IG      L  V+  D   +L    +  LE  +   I +       G   
Sbjct: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLF-----GCAK 174

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSEP-VDNGANMLVT 236
            P  A +  D  +A             +++  YE+ L   + V   WS+  +DNGA++L+ 
Sbjct: 175  PTIAVLYQDNKDA-------------RHVKTYEVSLKDKDFVEGPWSQNNLDNGADLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GVL+  E  ++Y +    +    IP R  +    G + V  +         
Sbjct: 222  VP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDVDGSR-------- 267

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G I  + + H+ E V+ LKI+      + +++  L +  +F  S +G+  L +
Sbjct: 268  YLLGDHAGLIHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVFVGSSYGDSQLVK 327

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               +   PD + S   ++E                      +  +L PI+D  + +L  +
Sbjct: 328  ---LNLHPDAKGSYVEVLE----------------------RYINLGPIVDFCVVDLERQ 362

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLR++R G+ ++E A  +L G+   +W++K ++++ FD ++VVSF
Sbjct: 363  GQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGI-KGMWSLKSSIDEAFDTFLVVSF 421

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GFL    +L       + L+QV  + +R +    R   +
Sbjct: 422  ISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRD 481

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            EW  P   T+    +N  QV++A  GG L+Y E+   G+L EV+   +  +V+CLDI  +
Sbjct: 482  EWHAPAGFTVNVATANASQVLLATGGGHLVYLEIG-DGKLTEVQHALLEYEVSCLDINPI 540

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
             +    S+  +VG + D ++RI SL                 PE  L L  +  +GGE  
Sbjct: 541  GDNPNYSQLASVGMWTDISVRIFSL-----------------PE--LTLITKEQLGGE-- 579

Query: 652  ADHPASLFLNA---------GLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
               P S+ L A          L +G L    +D  TGQL D +   LG +P  L +    
Sbjct: 580  -IIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTTTGQLKDRKKVSLGTQPITLRTFSSK 638

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
                +   S RP + Y    + L + ++ + + +   F+S    + +       L + TI
Sbjct: 639  SATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTI 698

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            + + +  +   +PL    RR   Q + +                        F    +G 
Sbjct: 699  DDI-QKLHIRTIPLGEHARRICHQEQTR-----------------------TFGICSLGN 734

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
              N    +M                              +R+LD ++        L   E
Sbjct: 735  QSNAEESEMH----------------------------FVRLLDDQTFEFMSTYPLDSFE 766

Query: 883  AAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQ 941
               SI + +F D ++     VGTA  L   P+ N    G I ++  VE+G+ L+L+ + +
Sbjct: 767  YGCSILSCSFTDDKN-VYYCVGTAYVL---PEENEPTKGRILVF-IVEDGR-LQLIAEKE 820

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDR 996
             +G   +L  F G+LLA I   ++LY     D G + L  +C +      +  + T  D 
Sbjct: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDF 879

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+   N+  V+  
Sbjct: 880  IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLVTVK-- 937

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP-------G 1109
                            K  +G  +    ++E + ++H+G+ V   +  SLV        G
Sbjct: 938  ----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIG 981

Query: 1110 GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AY 1164
               +VI+GTV G +G ++A   ++   F   L+  +R+    + G  H  +RS       
Sbjct: 982  QIPTVIFGTVNGVIG-VIASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRT 1040

Query: 1165 FPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
               ++ +DGDL E F  LS +    I+  ++    E+ K++EE+
Sbjct: 1041 AEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEEL 1084


>gi|12082087|dbj|BAB20761.1| UV-damaged DNA binding protein [Oryza sativa Japonica Group]
          Length = 1090

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 283/1243 (22%), Positives = 537/1243 (43%), Gaps = 194/1243 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+G     ++VA+   +E  LL P+    ++ ++   I+
Sbjct: 3    VWNYVVTAHKPTSVTHSCVGNFTGPNQLNLIVAKCTRIEIHLLTPQG---LQPMIDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR     +D++ + ++  +  +L+++  K+ +  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHNETQDFLFIATERYKFCVLQWDGEKSELLTRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCV 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
             P    +  D  +A    T + A + +            + V   WS+  +DNGA +L+ 
Sbjct: 174  KPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGAGLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GV++  E  ++Y N  +   RA+  +++         I+ A          
Sbjct: 222  VPAP---LGGVIIIGEETIVYCN-ANSTFRAIPIKQS---------IIRAYGRVDPDGSR 268

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + L H+ E V+ LKI+Y     + +S+  L +G ++  S FG+  L +
Sbjct: 269  YLLGDNAGILHLLVLTHERERVTGLKIEYLGETSIASSISYLDNGVVYVGSRFGDSQLVK 328

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               + ADP+      + +E                    +E+  +L PI+D  + +L  +
Sbjct: 329  LN-LQADPN-----GSYVEV-------------------LERYVNLGPIVDFCVVDLDRQ 363

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLR++R G+ ++E A  +L G+   +W++K + ND +D Y+VVSF
Sbjct: 364  GQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGI-KGLWSLKSSFNDPYDMYLVVSF 422

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GF   T +L      +D L+QV  + +R +    R  ++
Sbjct: 423  ISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVD 482

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            +W  P   ++    +N  QV++A  GG L+Y E+    +L+EV+  ++  +++C+D+  +
Sbjct: 483  QWNAPEGFSVNVASANASQVLLATGGGHLVYLEIK-DSKLVEVKHIQLEHEISCVDLNPI 541

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
             E  + S   AVG + D ++RILS  PD  ++++  +++     P S+L   ++      
Sbjct: 542  GENPQYSSLAAVGMWTDISVRILSF-PD--LELIRKENLGGEIVPRSVLLCTLEGVS--- 595

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G LF  +++  TG+L+D +   LG +P  L +    G   +  
Sbjct: 596  ---------YLLCALGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKGTTHVFA 646

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + L + ++ + + +   F++    + +       L + TI+ + +  
Sbjct: 647  SSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDI-QKL 705

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREA-----AKKECFEAAGMGENG 824
            +   +PL +  RR   Q + + +          + EE E         + FE   + +  
Sbjct: 706  HIRTIPLDHQTRRICHQEQSRTLAFCSFKHNQTSIEESETHFVRLLDHQTFEFLSIYQ-- 763

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
               +DQ E+G                          C                       
Sbjct: 764  ---LDQYEHG--------------------------C----------------------- 771

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFVEEGKSLELLHKTQVE 943
             SI + +F D ++     VGTA  L   P+ N  + G I ++  VE+G+ L+L+ + + +
Sbjct: 772  -SIISCSFSD-DNNVYYCVGTAYVL---PEENEPSKGRILVFA-VEDGR-LQLIVEKETK 824

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDL-----GKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            G   +L  F G+LLA I   ++LY       G   L  +C +      + +  T  D I 
Sbjct: 825  GAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSECGHHGHILALYT-QTRGDFIV 883

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+ +S     Y+ +E+ +   A D    W++A   +D +   GA+   NI+ VR   D
Sbjct: 884  VGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNSD 943

Query: 1059 -VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGG 1110
              +DE            E+G+L       E + ++H+G+     +  SLV        G 
Sbjct: 944  AATDE------------ERGRL-------EVVGEYHLGEFGNRFRHGSLVMRLPDSEMGQ 984

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY-----F 1165
              +VI+GT+ G +G + +      V F   L+  + +    +    H  +RS +      
Sbjct: 985  IPTVIFGTINGVIGIIASLPHEQYV-FLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTS 1043

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
              ++ +DGDL E F  LS +   ++A  +     E+ K++EE+
Sbjct: 1044 EARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSKRVEEL 1086


>gi|350537001|ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
 gi|350539125|ref|NP_001233864.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
 gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA damage-binding protein 1; AltName: Full=High
            pigmentation protein 1; AltName: Full=UV-damaged
            DNA-binding protein 1
 gi|38455768|gb|AAR20885.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
 gi|42602165|gb|AAS21683.1| UV-damaged DNA binding protein 1 [Solanum lycopersicum]
          Length = 1090

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 282/1239 (22%), Positives = 525/1239 (42%), Gaps = 186/1239 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+G +   +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    VWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR  G  +D + + ++  +  +L+++  +  V  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHGETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCP 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSEP-VDNGANMLV 235
             P    +  D  +A             +++  YE+ L   + +   W++  +DNGA++L+
Sbjct: 174  KPTIVVLYQDNKDA-------------RHVKTYEVSLKDKDFIEGPWAQNNLDNGASLLI 220

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLF 295
             VP       GVL+  E  ++Y +         IP R  +    G   V A   R     
Sbjct: 221  PVP---PPLCGVLIIGEETIVYCS---ASAFKAIPIRPSITRAYGR--VDADGSR----- 267

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
             +LL    G +  + + H+ E V+ LKI+      + +++  L + ++F  S +G+  L 
Sbjct: 268  -YLLGDHNGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAFVFIGSSYGDSQLV 326

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            +   +   PD + S   ++E                      +  +L PI+D  + +L  
Sbjct: 327  K---LNLQPDTKGSYVEVLE----------------------RYVNLGPIVDFCVVDLER 361

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            +   Q+ T  G     SLRI+R G+ ++E A  +L G+   +W+++   +D +D ++VVS
Sbjct: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSATDDPYDTFLVVS 420

Query: 476  FNNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--I 531
            F + T VL++   + +EE    GF     +L       + L+QV  + +R +    R   
Sbjct: 421  FISETRVLAMNLEDELEETEIEGFNSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRDLK 480

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIAS 591
            NEW  P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  D++CLDI  
Sbjct: 481  NEWFAPVGYSVNVATANATQVLLATGGGHLVYLEIG-DGVLNEVKYAKLDYDISCLDINP 539

Query: 592  VPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGG 648
            + E    S   AVG + D ++RI SL PD  + +++ + +     P S+L    +     
Sbjct: 540  IGENPNYSNIAAVGMWTDISVRIYSL-PD--LNLITKEQLGGEIIPRSVLMCSFEGIS-- 594

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                      +L   L +G L   V+ M TG+L+D +   LG +P  L +        + 
Sbjct: 595  ----------YLLCALGDGHLLNFVLSMSTGELTDRKKVSLGTQPITLRTFSSKDTTHVF 644

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
              S RP + Y    + L + ++ + + +   F+     + +       L + TI+ + + 
Sbjct: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEI-QK 703

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
             +  ++PL    RR   Q + +   +         A++ E                    
Sbjct: 704  LHIRSIPLGEHARRISHQEQTRTFALCSVKYTQSNADDPE-------------------- 743

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
                                          +  +R+LD ++        L   E   SI 
Sbjct: 744  ------------------------------MHFVRLLDDQTFEFISTYPLDQFEYGCSIL 773

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
            + +F D +      +GTA  +   P+ N    G I ++  VE+GK L+L+ + + +G   
Sbjct: 774  SCSFSD-DSNVYYCIGTAYVM---PEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 827

Query: 948  ALCQFQGRLLAGIGPVLRLY------DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            +L  F G+LLA I   ++LY      D G + L  +C +      +  + T  D I VGD
Sbjct: 828  SLNAFNGKLLAAINQKIQLYKWASREDGGSRELQTECGHHGHILALY-VQTRGDFIVVGD 886

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            + +S     ++ +E  +   A D    W++A   +D D   GA+   N++ VR       
Sbjct: 887  LMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------- 939

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESV 1114
                       K  +G  +   +++E + ++H+G+ V   +  SLV        G   +V
Sbjct: 940  -----------KNSEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 988

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY-----FPVKD 1169
            I+GTV G +G ++A    D   F   L+ ++R+    + G  H  +RS Y        K+
Sbjct: 989  IFGTVNGVIG-VIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKN 1047

Query: 1170 VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
             +DGDL E F  LS +   +I+  +     E++K++EE+
Sbjct: 1048 FLDGDLIESFLDLSRNRMEEISKAMSVPVEELMKRVEEL 1086


>gi|356512638|ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-like isoform 2 [Glycine max]
          Length = 1068

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 282/1237 (22%), Positives = 520/1237 (42%), Gaps = 204/1237 (16%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+  +   +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR  G  +DY+ + ++  +  +L+++  +  +  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETAELVTRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q +  D KG+          K  + +  +    L I            +Y       G  
Sbjct: 119  QVIPFDNKGQL---------KEAFNIRLEELQVLDIK----------FLY-------GCS 152

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
             P    +  D  +A    T + A    K+  F E           WS+  +DNGA++L+ 
Sbjct: 153  KPTIVVLYQDNKDARHVKTYEVA---LKDKDFLE---------GPWSQNNLDNGADLLIP 200

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GVL+  E  ++Y +    +    IP R  +    G +    +         
Sbjct: 201  VP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDPDGSR-------- 246

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + + H+ E V+ LKI+      + +++  L + +++  S +G+  L +
Sbjct: 247  YLLGDHTGLLSLLVITHEKEKVTGLKIEPLGETSIASTISYLDNAFVYIGSSYGDSQLIK 306

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               +   PD + S        EG                +E+  +L PI+D  + +L  +
Sbjct: 307  ---LNLQPDAKGSYV------EG----------------LERYVNLGPIVDFCVVDLERQ 341

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLR++R G+ ++E A  +L G+   +W+++ + +D FD ++VVSF
Sbjct: 342  GQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSF 400

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GF     +L       + L+QV  S +R +    R   N
Sbjct: 401  ISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRELRN 460

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            EW  P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI  +
Sbjct: 461  EWHAPSGYSVNVATANATQVLLATGGGHLVYLEIG-DGILQEVKHAQLEYEISCLDINPI 519

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
             E    S   AVG + D ++RI SL PD  + +++ + +     P S+L    +      
Sbjct: 520  GENPNHSHLAAVGMWTDISVRIFSL-PD--LSLITKEQLGGEIIPRSVLLCAFEGIS--- 573

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G L   +++  TG+L+D +   LG +P  L +        +  
Sbjct: 574  ---------YLLCALGDGHLLNFMLNTSTGELADRKKVSLGTQPITLRTFSSKNTTHVFA 624

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + L + ++ + + +   F+S    + +       L + TI+ + +  
Sbjct: 625  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKL 683

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            +  ++PL    RR   Q + +   I                                   
Sbjct: 684  HIRSIPLGEHARRICHQEQSRTFAICSL-------------------------------- 711

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
                     KY+P S E         D  +  +R+LD ++        L   E    I +
Sbjct: 712  ---------KYNPASGE---------DSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIIS 753

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             +F D ++     VGTA  L   P+ N    G I ++  VE+GK L+L+ + + +G    
Sbjct: 754  CSFSD-DNNVYYCVGTAYVL---PEENEPTKGRILVFA-VEDGK-LQLIAEKETKGAVYC 807

Query: 949  LCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQ 1003
            L  F G+LLA I   ++LY     D G   L  +C +      +  + T  D I VGD+ 
Sbjct: 808  LNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSECGHHGHILALY-VQTRGDFIVVGDLM 866

Query: 1004 ESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI 1063
            +S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR         
Sbjct: 867  KSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVR--------- 917

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVIY 1116
                     K  +G  +    ++E + ++H+G+ V   +  SLV        G   +VI+
Sbjct: 918  ---------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 968

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVI 1171
            GT+ G +G + +      V F   L+ ++R+    + G  H  +RS          ++ +
Sbjct: 969  GTINGVIGVIASLPHEQYV-FLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVEARNFL 1027

Query: 1172 DGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            DGDL E F  L+     +I+  LD +  E+ K++EE+
Sbjct: 1028 DGDLIESFLDLNRSKMDEISKALDVSVEELCKRVEEL 1064


>gi|356525403|ref|XP_003531314.1| PREDICTED: DNA damage-binding protein 1-like isoform 2 [Glycine max]
          Length = 1068

 Score =  243 bits (620), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 283/1249 (22%), Positives = 520/1249 (41%), Gaps = 228/1249 (18%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+  +   +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSK---------NVFDKIHQETFGKS 109
            G I +L  FR  G  +DY+ + ++  +  +L+++            +V D+I + T    
Sbjct: 60   GRIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETGELVTRAMGDVSDRIGRPTDN-- 117

Query: 110  GCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSI 169
                   GQ +  D KG+          K  + +  +    L I            +Y  
Sbjct: 118  -------GQVIPFDNKGQL---------KEAFNIRLEELQVLDIK----------FLY-- 149

Query: 170  CGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VD 228
                 G   P    +  D  +A    T + A + +            + V   WS+  +D
Sbjct: 150  -----GCSKPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLD 192

Query: 229  NGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAT 288
            NGA++L+ VP       GVL+  E  ++Y +    +    IP R  +    G +    + 
Sbjct: 193  NGADLLIPVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDPDGSR 246

Query: 289  HRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
                    +LL    G +  + + H+ E V+ LKI+      + +++  L + +++  S 
Sbjct: 247  --------YLLGDHTGLVSLLVIIHEKEKVTGLKIEPLGETSIASTISYLDNAFVYVGSS 298

Query: 349  FGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            +G+  L +   +   PD + S   ++E                      +  +L PI+D 
Sbjct: 299  YGDSQLIK---LNLQPDAKGSYVEVLE----------------------RYVNLGPIVDF 333

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
             + +L  +   Q+ T  G     SLR++R G+ ++E A  +L G+   +W+++ + +D F
Sbjct: 334  CVVDLERQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGI-KGMWSLRSSTDDPF 392

Query: 469  DAYIVVSFNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
            D ++VVSF + T  L +++ + +EE    GF     +L       + L+QV  S +R + 
Sbjct: 393  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVS 452

Query: 527  EDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV 584
               R   NEW  P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  ++
Sbjct: 453  STTRDLRNEWHAPSGYSVNVATANATQVLLATGGGHLVYLEIG-DGILQEVKHAQLEYEI 511

Query: 585  ACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLE 641
            +CLDI  + E    S   AVG + D ++RI SL PD  + +++ + +     P S+L   
Sbjct: 512  SCLDINPIGENPNHSNLAAVGMWTDISVRIFSL-PD--LSLITKEQLGGEIIPRSVLLCA 568

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
             +               +L   L +G L   +++  TG+L+D +   LG +P  L +   
Sbjct: 569  FEGIS------------YLLCALGDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSS 616

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
                 +   S RP + Y    + L + ++ + + +   F+S    + +       L + T
Sbjct: 617  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 676

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I+ + +  +  ++PL    RR   Q + +   I                           
Sbjct: 677  IDDI-QKLHIRSIPLGEHARRICHQEQSRTFAICSL------------------------ 711

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
                             KY+P S E         D  +  +R+LD ++        L   
Sbjct: 712  -----------------KYNPASGE---------DSEMHFVRLLDDQTFEFISTYSLDTY 745

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKT 940
            E    I + +F D ++     VGTA  L   P+ N    G I ++  VE+GK L+L+ + 
Sbjct: 746  EYGCFIISCSFSD-DNNVYYCVGTAYVL---PEENEPTKGRIIVFA-VEDGK-LQLIAEK 799

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRD 995
            + +G    L  F G+LLA I   ++LY     D G   L  +C +      +  + T  D
Sbjct: 800  ETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSECGHHGHILALY-VQTRGD 858

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
             I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR 
Sbjct: 859  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVR- 917

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------P 1108
                             K  +G  +    ++E + ++H+G+ V   +  SLV        
Sbjct: 918  -----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 960

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----A 1163
            G   +VI+GT+ G +G + +      V F   L+ ++R+    + G  H  +RS      
Sbjct: 961  GQIPTVIFGTINGVIGVIASLPHEQYV-FLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKK 1019

Query: 1164 YFPVKDVIDGDLCEQFPTLSLDLQRKIADEL----DRTPGEILKKLEEI 1208
                ++ +DGDL E F    LDL R   DE+    D +  E+ K++EE+
Sbjct: 1020 TVEARNFLDGDLIESF----LDLNRSKMDEISKAVDVSVEELCKRVEEL 1064


>gi|55976392|sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName: Full=UV-damaged
            DNA-binding protein 1
 gi|49484911|gb|AAT66742.1| UV-damaged DNA binding protein 1 [Solanum cheesmaniae]
          Length = 1095

 Score =  243 bits (619), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 283/1241 (22%), Positives = 525/1241 (42%), Gaps = 185/1241 (14%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRI--ETLVSTE 56
            ++ Y +T  +PT +  +  GNF+G +   +++A+   +E  LL P+    I  + ++   
Sbjct: 3    VWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQCICLQPMLDVP 62

Query: 57   IFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIV 115
            I+G I +L  FR  G  +D + + ++  +  +L+++  +  V  +   +   + G R   
Sbjct: 63   IYGRIATLELFRPHGETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSDRIG-RPTD 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
             GQ   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G
Sbjct: 122  NGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YG 176

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSEP-VDNGANM 233
               P    +  D  +A             +++  YE+ L   + +   W++  +DNGA++
Sbjct: 177  CPKPTIVVLYQDNKDA-------------RHVKTYEVSLKDKDFIEGPWAQNNLDNGASL 223

Query: 234  LVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKT 293
            L+ VP       GVL+  E  ++Y +         IP R  +    G   V A   R   
Sbjct: 224  LIPVP---PPLCGVLIIGEETIVYCS---ASAFKAIPIRPSITRAYGR--VDADGSR--- 272

Query: 294  LFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
               +LL    G +  + + H+ E V+ LKI+      + +++  L + ++F  S +G+  
Sbjct: 273  ---YLLGDHNGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAFVFIGSSYGDSQ 329

Query: 354  LYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANL 413
            L +   +   PD + S   ++E                      +  +L PI+D  + +L
Sbjct: 330  LVK---LNLQPDTKGSYVEVLE----------------------RYVNLGPIVDFCVVDL 364

Query: 414  FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIV 473
              +   Q+ T  G     SLRI+R G+ ++E A  +L G+   +W+++   +D +D ++V
Sbjct: 365  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSATDDPYDTFLV 423

Query: 474  VSFNNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
            VSF + T VL++   + +EE    GF     +L       + L+QV  + +R +    R 
Sbjct: 424  VSFISETRVLAMNLEDELEETEIEGFNSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRD 483

Query: 531  -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
              NEW  P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  D++CLDI
Sbjct: 484  LKNEWFAPVGYSVNVATANATQVLLATGGGHLVYLEIG-DGVLNEVKYAKLDYDISCLDI 542

Query: 590  ASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASV 646
              + E    S   AVG + D ++RI SL PD  + +++ + +     P S+L    +   
Sbjct: 543  NPIGENPNYSNIAAVGMWTDISVRIYSL-PD--LNLITKEQLGGEIIPRSVLMCSFEGIS 599

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
                        +L   L +G L   V+ M TG+L+D +   LG +P  L +        
Sbjct: 600  ------------YLLCALGDGHLLNFVLSMSTGELTDRKKVSLGTQPITLRTFSSKDTTH 647

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
            +   S RP + Y    + L + ++ + + +   F+     + +       L + TI+ + 
Sbjct: 648  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEI- 706

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
            +  +  ++PL    RR   Q + +   +         A++ E                  
Sbjct: 707  QKLHIRSIPLGEHARRISHQEQTRTFALCSVKYTQSNADDPE------------------ 748

Query: 827  NMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFS 886
                                            +  +R+LD ++        L   E   S
Sbjct: 749  --------------------------------MHFVRLLDDQTFEFISTYPLDQFEYGCS 776

Query: 887  ICTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            I + +F D +      +GTA  +   P+ N    G I ++  VE+GK L+L+ + + +G 
Sbjct: 777  ILSCSFSD-DSNVYYCIGTAYVM---PEENEPTKGRILVF-IVEDGK-LQLIAEKETKGA 830

Query: 946  PLALCQFQGRLLAGIGPVLRLY------DLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
              +L  F G+LLA I   ++LY      D G + L  +C +      +  + T  D I V
Sbjct: 831  VYSLNAFNGKLLAAINQKIQLYKWASREDGGSRELQTECGHHGHILALY-VQTRGDFIVV 889

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+ +S     ++ +E  +   A D    W++A   +D D   GA+   N++ VR     
Sbjct: 890  GDLMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR----- 944

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGE 1112
                         K  +G  +   +++E + ++H+G+ V   +  SLV        G   
Sbjct: 945  -------------KNSEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 991

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY-----FPV 1167
            +VI+GTV G +G ++A    D   F   L+ ++R+    + G  H  +RS Y        
Sbjct: 992  TVIFGTVNGVIG-VIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDA 1050

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            K+ +DGDL E F  LS +   +I+  +     E++K++EE+
Sbjct: 1051 KNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELMKRVEEL 1091


>gi|194741158|ref|XP_001953056.1| GF17579 [Drosophila ananassae]
 gi|190626115|gb|EDV41639.1| GF17579 [Drosophila ananassae]
          Length = 1140

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 293/1246 (23%), Positives = 528/1246 (42%), Gaps = 186/1246 (14%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +V+AR   +E  L+ PE    +  L    I G I
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLVIARNNQVEIDLVTPEG---LRPLKEININGTI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP--GQY 119
              +  FR   S KD + + +    ++ILE     +V   + +     S    I    G  
Sbjct: 62   AVMRHFRPPDSNKDLLFILTRRYNVMILEARMVNDVITVVTKANGNVSDSVGIPSEGGVI 121

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPK R  +IG C  Q L  ++  D  A    ++ L   + +  VY +  +  G  NP
Sbjct: 122  AAIDPKAR--VIGMCLYQGLFTIIPMDKEASELKATNLRMDELN--VYDVEFLH-GCLNP 176

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTVP 238
                I        +D+ G+     + NL   E       +   W +  V+  A ML+TVP
Sbjct: 177  TVIVIH-------KDNDGRHVKSHEINLREKEF------MKIAWKQDNVETEATMLITVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL---- 294
                   GV+V     ++Y +    +  AV P                 T RQ T+    
Sbjct: 224  SP---IGGVIVIGRESIVYHDGS--NYHAVAP----------------LTFRQSTINCYA 262

Query: 295  ------FFFLLQTEYGDIFKVTLEHDNEH----VSELKIKYFDTIPVTASMCVLKSGYLF 344
                  F +LL    G ++ + L          V ++K++    I +   +  L +G+L+
Sbjct: 263  RVDSKGFRYLLGNMDGQLYMLFLGTSETSKGITVKDIKVEQLGEISIPECITYLDNGFLY 322

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
              +  G+  L +  +   D                             ++ +E   +L P
Sbjct: 323  IGARHGDSQLVRLSSDAIDGSY--------------------------VIPVENFTNLAP 356

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            I+D+ + +L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W++K  +
Sbjct: 357  ILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSLKVGI 415

Query: 465  NDE-FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
            +D  ++  +V++F   T +L++ GE VEE    GF     +   + +  D ++QV    +
Sbjct: 416  DDSPYENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQIIQVTSDSV 475

Query: 523  RHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
            R ++   +  + EWR  G R+I  V  N  Q+V+A S  ++ Y  ++  G+L+E  +  +
Sbjct: 476  RLVKSATKDLVAEWRPEGDRSIGVVSCNSTQIVVA-SARDIFYIVIE-DGKLVEKSRKTL 533

Query: 581  SGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESL 637
            + +VACLDI  + E + +S  +AVG + D +  ILSL P+  ++ +  + +S    P S+
Sbjct: 534  AYEVACLDITPLDESQNKSDLVAVGLWTDISAVILSL-PE--LETIYTEKLSGEIIPRSI 590

Query: 638  LFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
            L    +          H    +L   L +G ++  ++D  TGQL+D +   LG +P  L 
Sbjct: 591  LMTTFEGI--------H----YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLR 638

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
            +        +   S RP + Y    + + + ++ + + +  S ++    + +     N++
Sbjct: 639  TFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSV 698

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI----IETDQGALTAEEREAAKKE 813
             + TI+ + +    T +PL   PRR   Q   +   +    I+      T   R +A  +
Sbjct: 699  ILGTIDEIQKLHIRT-VPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGGTKPLRNSASTQ 757

Query: 814  C----FEAAGMGENGNG--NMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP 867
                 + +  + + G G       E G + + ++ L  +Q  +    + ++V+      P
Sbjct: 758  AQNITYSSNILPKPGTGTSTATNAEVGQEIDVHNLLVIDQNTFEVLHAHQFVA------P 811

Query: 868  RSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRF 927
             + ++    +L D+   + +               V T+  +   P+  +  G I I+ +
Sbjct: 812  ETISSLMSAKLGDDPNTYYV---------------VATSLVIPDEPEPKV--GRIIIFHY 854

Query: 928  VEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI 987
                  L  + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N    N I
Sbjct: 855  --HDNKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECN--IQNMI 910

Query: 988  VS--INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD 1045
             +  +    D I VGD+  S    ++++ E      A D  P+W+ A   +D DT  G++
Sbjct: 911  AALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSE 970

Query: 1046 KFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKAS 1105
              GN++  +  +D +   +E+                   + E+ +FH+GD V   +  S
Sbjct: 971  TNGNLFVCQ--KDSAATTDEE----------------RQLLPELARFHLGDTVNVFRHGS 1012

Query: 1106 LV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRD 1156
            LV         P  G  V+YGT  G++G +     +D  DF   LE  +++    +   +
Sbjct: 1013 LVMQNVGERTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKSVGKIE 1070

Query: 1157 HMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            H  YR+        P +  IDGDL E F  L  D  R     L+ T
Sbjct: 1071 HTYYRNFQINTKVEPSEGFIDGDLIESFLDLGRDKMRDAVQGLEIT 1116


>gi|218197365|gb|EEC79792.1| hypothetical protein OsI_21216 [Oryza sativa Indica Group]
          Length = 1089

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 284/1242 (22%), Positives = 543/1242 (43%), Gaps = 193/1242 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+G     ++VA+   +E  LL P+    ++ ++   I+
Sbjct: 3    VWNYVVTAHKPTSVTHSCVGNFTGPNQLNLIVAKCTRIEIHLLTPQG---LQPMIDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR     +D++ + ++  +  +L+++  K+ +  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHNETQDFLFIATERYKFCVLQWDGEKSELLTRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCV 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
             P    +  D  +A    T + A + +            + V   WS+  +DNGA +L+ 
Sbjct: 174  KPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGAGLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GV++  E  ++Y N  +   RA+  +++         I+ A          
Sbjct: 222  VPAP---LGGVIIIGEETIVYCN-ANSTFRAIPIKQS---------IIRAYGRVDPDGSR 268

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + L H+ E V+ LKI+Y     + +S+  L +G ++  S FG+  L +
Sbjct: 269  YLLGDNAGILHLLVLTHERERVTGLKIEYLGETSIASSISYLDNGVVYVGSRFGDSQLVK 328

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               + ADP+      + +E                    +E+  +L PI+D  + +L  +
Sbjct: 329  LN-LQADPN-----GSYVEV-------------------LERYVNLGPIVDFCVVDLDRQ 363

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLR++R G+ ++E A  +L G+   +W++K + ND +D Y+VVSF
Sbjct: 364  GQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGI-KGLWSLKSSFNDPYDMYLVVSF 422

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GF   T +L      +D L+QV  + +R +    R  ++
Sbjct: 423  ISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVD 482

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            +W  P   ++    +N  QV++A  GG L+Y E+    +L+EV+  ++  +++C+D+  +
Sbjct: 483  QWNAPEGFSVNVASANASQVLLATGGGHLVYLEIK-DSKLVEVKHIQLEHEISCVDLNPI 541

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
             E  + S   AVG + D ++RILSL PD  ++++  +++     P S+L   ++      
Sbjct: 542  GENPQYSSLAAVGMWTDISVRILSL-PD--LELIRKENLGGEIVPRSVLLCTLEGVS--- 595

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G LF  +++  TG+L+D +   LG +P  L +    G   +  
Sbjct: 596  ---------YLLCALGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKGTTHVFA 646

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + L + ++ + + +   F++    + +       L + TI+ + +  
Sbjct: 647  SSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDI-QKL 705

Query: 770  NETALPLRYTPRRFVLQPKKKLMVI-IETDQGALTAEEREAAK---KECFEAAGMGENGN 825
            +   +PL      F ++  +   V+ ++ +Q ++   E    +    + FE   + +   
Sbjct: 706  HIRTIPLNEQHVAFAIRNVQDTSVLQLQHNQTSIEESETHFVRLLDHQTFEFLSIYQ--- 762

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
              +DQ E+G                          C                        
Sbjct: 763  --LDQYEHG--------------------------C------------------------ 770

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFVEEGKSLELLHKTQVEG 944
            SI + +F D ++     VGTA  L   P+ N  + G I ++  VE+G+ L+L+ + + +G
Sbjct: 771  SIISCSFSD-DNNVYYCVGTAYVL---PEENEPSKGRILVFA-VEDGR-LQLIVEKETKG 824

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDL-----GKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
               +L  F G+LLA I   ++LY       G   L  +C +      + +  T  D I V
Sbjct: 825  AVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSECGHHGHILALYT-QTRGDFIVV 883

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD- 1058
            GD+ +S     Y+ +E+ +   A D    W++A   +D +   GA+   NI+ VR   D 
Sbjct: 884  GDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNSDA 943

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGG 1111
             +DE            E+G+L       E + ++H+G+ V  L+  SLV        G  
Sbjct: 944  ATDE------------ERGRL-------EVVGEYHLGEFVNRLRHGSLVMRLPDSEMGQI 984

Query: 1112 ESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY-----FP 1166
             +VI+GT+ G +G + +      V F   L+  + +    +    H  +RS +       
Sbjct: 985  PTVIFGTINGVIGIIASLPHEQYV-FLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSE 1043

Query: 1167 VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
             ++ +DGDL E F  LS +   ++A  +     E+ K++EE+
Sbjct: 1044 ARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSKRVEEL 1085


>gi|186511557|ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
 gi|332657118|gb|AEE82518.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
          Length = 1067

 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 287/1242 (23%), Positives = 516/1242 (41%), Gaps = 221/1242 (17%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT +  +  GNF+  +   ++VA+   +E  LL P+    ++ ++   I+G I
Sbjct: 6    YVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQG---LQPMLDVPIYGRI 62

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQYL 120
             +L  FR  G  +D++ + ++  +  +L+++P S  +  +   +   + G R    GQ +
Sbjct: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDPESSELITRAMGDVSDRIG-RPTDNGQVI 121

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
              D KG+          K  + +  +    L I                     G   P 
Sbjct: 122  PFDNKGQL---------KEAFNIRLEELQVLDIKFLF-----------------GCAKPT 155

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSE-PVDNGANMLVTVP 238
             A +  D  +A             +++  YE+ L   + V   WS+  +DNGA++L+ VP
Sbjct: 156  IAVLYQDNKDA-------------RHVKTYEVSLKDKDFVEGPWSQNSLDNGADLLIPVP 202

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
                   GVL+  E  ++Y +         IP R  +    G + V  +         +L
Sbjct: 203  ---PPLCGVLIIGEETIVYCS---ASAFKAIPIRPSITKAYGRVDVDGSR--------YL 248

Query: 299  LQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            L    G I  + + H+ E V+ LKI+      + +++  L +  +F  S +G+  L +  
Sbjct: 249  LGDHAGMIHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVFVGSSYGDSQLVK-- 306

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
             +   PD + S   ++E                      +  +L PI+D  + +L  +  
Sbjct: 307  -LNLHPDAKGSYVEVLE----------------------RYINLGPIVDFCVVDLERQGQ 343

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNN 478
             Q+ T  G     SLR++R G+ ++E A  +L G+   +W++K ++++ FD ++VVSF +
Sbjct: 344  GQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGI-KGMWSLKSSIDEAFDTFLVVSFIS 402

Query: 479  AT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEW 534
             T  L +++ + +EE    GFL    +L       + L+QV  + +R +    R   +EW
Sbjct: 403  ETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEW 462

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPE 594
              P   T+    +N  QV++A  GG L+Y E+   G+L EV+   +  +V+CLDI  + +
Sbjct: 463  HAPAGFTVNVATANASQVLLATGGGHLVYLEIG-DGKLTEVQHALLEYEVSCLDINPIGD 521

Query: 595  GRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGAD 653
                S+  AVG + D ++RI SL                 PE  L L  +  +GGE    
Sbjct: 522  NPNYSQLAAVGMWTDISVRIFSL-----------------PE--LTLITKEQLGGE---I 559

Query: 654  HPASLFLNA---------GLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             P S+ L A          L +G L    +D  TGQL D +   LG +P  L +      
Sbjct: 560  IPRSVLLCAFEGISYLLCALGDGHLLNFQMDTTTGQLKDRKKVSLGTQPITLRTFSSKSA 619

Query: 705  AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
              +   S RP + Y    + L + ++ + + +   F+S    + +       L + TI+ 
Sbjct: 620  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDD 679

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
            + +    T +PL    RR   Q + +                        F    +G   
Sbjct: 680  IQKLHIRT-IPLGEHARRICHQEQTR-----------------------TFGICSLGNQS 715

Query: 825  NGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
            N    +M                              +R+LD ++        L   E  
Sbjct: 716  NSEESEMH----------------------------FVRLLDDQTFEFMSTYPLDSFEYG 747

Query: 885  FSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVE 943
             SI + +F + ++     VGTA  L   P+ N    G I ++  VE+G+ L+L+ + + +
Sbjct: 748  CSILSCSFTEDKN-VYYCVGTAYVL---PEENEPTKGRILVF-IVEDGR-LQLIAEKETK 801

Query: 944  GIPLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            G   +L  F G+LLA I   ++LY     D G + L  +C +      +  + T  D I 
Sbjct: 802  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIV 860

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+   N+  V+    
Sbjct: 861  VGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVK---- 916

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP-------GGG 1111
                          K  +G  +    ++E + ++H+G+ V   +  SLV        G  
Sbjct: 917  --------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQI 962

Query: 1112 ESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFP 1166
             +VI+GTV G +G ++A   ++   F   L+  +R+    + G  H  +RS         
Sbjct: 963  PTVIFGTVNGVIG-VIASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAE 1021

Query: 1167 VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
             ++ +DGDL E F  LS +    I+  ++    E+ K++EE+
Sbjct: 1022 ARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEEL 1063


>gi|195329354|ref|XP_002031376.1| GM24084 [Drosophila sechellia]
 gi|194120319|gb|EDW42362.1| GM24084 [Drosophila sechellia]
          Length = 1140

 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 296/1247 (23%), Positives = 520/1247 (41%), Gaps = 188/1247 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +++AR   +E  L+ PE    +  L    I G I
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG---LRPLKEININGTI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP--GQY 119
              +  FR   S KD + + +    ++ILE     +V   + +     S    I    G  
Sbjct: 62   AVMRHFRPPDSNKDLLFILTRRYNVMILEARMVNDVITVVTKANGNVSDSVGIPSEGGVI 121

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPK R  +IG C  Q L  ++  D  A    ++ L   + +  VY +  +  G  NP
Sbjct: 122  AAIDPKAR--VIGMCLYQGLFTIIPMDKDASELKATNLRMDELN--VYDVEFLH-GCLNP 176

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTVP 238
                I        +D+ G+     + NL   E       +   W +  V+  A ML+ VP
Sbjct: 177  TVIVIH-------KDNDGRHVKSHEINLRDKEF------MKIAWKQDNVETEATMLIPVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL---- 294
                   GV+V     ++Y +    +  AV P                 T RQ T+    
Sbjct: 224  S---PIGGVIVIGRESIVYHDGS--NYHAVAP----------------LTFRQSTINCYA 262

Query: 295  ------FFFLLQTEYGDIFKVTL----EHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
                    +LL    G ++ + L          V ++K++    I +   +  L +G+L+
Sbjct: 263  RVSSNGLRYLLGNMDGQLYMLFLGTAETSKGVTVKDIKVEQLGEISIPECITYLDNGFLY 322

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
              +  G+  L +  +   D                             +V +E   +L P
Sbjct: 323  IGARHGDSQLVRLNSEAIDGSY--------------------------VVPVENFTNLAP 356

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            I+D+ + +L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W++K  V
Sbjct: 357  ILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSLKVGV 415

Query: 465  ND-EFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
            ++  ++  +V++F   T +L++ GE VEE    GF     +   S +  D L+QV    +
Sbjct: 416  DESSYENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSV 475

Query: 523  RHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
            R +    +  + EWR  G R+I  V  N  Q+++A S  ++ Y  ++  G L E  +  +
Sbjct: 476  RLVSSATKALVAEWRPTGDRSIGVVSCNTTQILVA-SACDIFYIVIE-DGSLREQSRRTL 533

Query: 581  SGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESL 637
            + +VACLDI  + E +K+S  +AVG + D +  ILSL PD  ++ +  + +S    P S+
Sbjct: 534  AYEVACLDITPLDETQKKSDLVAVGLWTDISAVILSL-PD--LETIYTEKLSGEIIPRSI 590

Query: 638  LFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
            L    +          H    +L   L +G ++  ++D  TGQL+D +   LG +P  L 
Sbjct: 591  LMTTFEGI--------H----YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLR 638

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
            +        +   S RP + Y    + + + ++ + + +  S ++    + +     NA+
Sbjct: 639  TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANKNAV 698

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
             + TI+ + +  +   +PL   PRR   Q   +   +       +    R  AK     A
Sbjct: 699  ILGTIDEI-QKLHIRTVPLGEGPRRIAYQESSQTFAV---STLRIDVHGRGGAKPLRNSA 754

Query: 818  AGMGEN-------------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRV 864
            +   +N             GN      E G + + ++ L  +Q  +    + ++VS    
Sbjct: 755  STQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQFVS---- 810

Query: 865  LDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHI 924
              P + ++    +L D+   + +               V T+  +   P+  +  G I I
Sbjct: 811  --PETISSLMSAQLGDDPNTYYV---------------VATSLVIPEEPEPKV--GRIII 851

Query: 925  YRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP 984
            + + E    L  + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N    
Sbjct: 852  FHYNE--NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQNM 909

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
               + +    D I VGD+  S    ++++ E      A D  P+W+ A   +D DT  G+
Sbjct: 910  IAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGS 969

Query: 1045 DKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKA 1104
            +  GN++  +  +D +   +E+                   + E+ +FH+GD V   +  
Sbjct: 970  ETNGNLFVCQ--KDSAATTDEE----------------RQLLPELARFHLGDTVNVFRHG 1011

Query: 1105 SLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGR 1155
            SLV         P  G  V+YGT  G++G +     +D  DF   LE  +++    +   
Sbjct: 1012 SLVMQNVGERTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKLVGKI 1069

Query: 1156 DHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
             H  YR+        P +  IDGDL E F  LS D  R     L+ T
Sbjct: 1070 GHKFYRNFRIHTQVEPSQGFIDGDLIESFLDLSRDKMRDAVQGLELT 1116


>gi|367003052|ref|XP_003686260.1| hypothetical protein TPHA_0F03460 [Tetrapisispora phaffii CBS 4417]
 gi|357524560|emb|CCE63826.1| hypothetical protein TPHA_0F03460 [Tetrapisispora phaffii CBS 4417]
          Length = 1334

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 201/762 (26%), Positives = 364/762 (47%), Gaps = 105/762 (13%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF-----------SGT--------KTP--EIVVARGKVLE 39
           +YLY+LTL++ +  I +  G F           S T        K P  +I +A    +E
Sbjct: 9   LYLYNLTLKKQSNYIHSCIGYFVDISVSNAVDISNTEKKKLERKKQPHLQICIATESHIE 68

Query: 40  LLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY-NPSKNV- 97
           L    + G +  L S  IF  I  +        ++  + V SDSG + I+++ N +  + 
Sbjct: 69  LYDV-SEGNLTPLASIPIFAIITKIESIFFQNKEESVLAVLSDSGVLSIIQFINENGTIK 127

Query: 98  FDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPL 157
              ++ +   ++G RR+ P  +L VDP GR ++I A E+ KL ++++     +  ISSPL
Sbjct: 128 LQTLYNQPLSRTGIRRLSPIYHLNVDPYGRCLLISAMERNKLCFLIDYQ-HDKFRISSPL 186

Query: 158 EAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLN 217
           E ++   I+      D  ++NP FA+IE+D             +     L FY LDL LN
Sbjct: 187 EINRPDMIILEETVCDVLYNNPCFASIEID-----------TVNNNDHRLVFYVLDLSLN 235

Query: 218 HVSRKWSEPVDNGANMLVTVP----------------GGGDGPSGVLVCAENFVIYKN-Q 260
           HV +K    + + AN L+++P                   +    V++  ENF++ K+  
Sbjct: 236 HVIKKSDYKIRSTANFLMSLPELSRYDIRTLINEEDEADENINPFVIIGFENFILIKDMN 295

Query: 261 GHPDVRAVIPRRADLPAERGVL-IVSAATHRQKTLFFFLLQTEYGDIFKVTLEHD--NEH 317
           G+  ++  IPRR +   ++GV+ I+S++  + K  FF LLQT +GD+ K+T+  D  N +
Sbjct: 296 GYYSLKVQIPRREN---QQGVVTIISSSIQKLKKDFFILLQTNHGDLLKLTVTADKNNRN 352

Query: 318 VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETE 377
                I YFD+I  +  + + K+GYLF  SE+ N  L+QF+++G D     S S+    E
Sbjct: 353 RPMASISYFDSIYQSDKLHIFKNGYLFNNSEYFNCHLFQFESLGEDNSASNSCSSKTPEE 412

Query: 378 EGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILR 437
                +F  P  L+NL     ++ L P+ D    N     +P   T        S   ++
Sbjct: 413 ---HILFKPPTTLQNLSISHSLKCLNPLRD----NTVSSSSPLTLTYQRNNNICS---IK 462

Query: 438 PGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVS--D 494
             +  + +  + +      +W + +N N +F   +++ + N+T +L+I  +++EE+   D
Sbjct: 463 ASVEFTSLITTYISNNVKNLWPI-RNPNSKFHKILILGYTNSTTMLNIENDSIEELQLED 521

Query: 495 SGFLDT-TPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----EWRTPGKRTIVKVGSN 548
           + F+     ++   LIG+ S++QV  + +  I      N     +W  P    I      
Sbjct: 522 NPFITKGDNTILAELIGNRSIIQVCENEMHQITLGTENNFKLKLKWYPPAGIRITSAACT 581

Query: 549 RLQVVIALSGGELIYFEVDM---TGQLLEVEKH-EMSGDVACLDIASVPEGRKRSRFLAV 604
             Q+ +ALS  E+ YFE++    +  + E+++  E+   ++CL      E   +S++LA+
Sbjct: 582 ASQIALALSNYEIAYFELNQFSDSDDINELQRRIEIGESISCLSF----ENSLKSKYLAI 637

Query: 605 GSYDNTIRILSL---DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLN 661
           G   +T++I+S+     DD ++I+S+Q+V +P   +  +                +L L+
Sbjct: 638 GCQGSTVKIVSVYNGSSDDFLEIISMQAVMAPVSDIKLV-------------RSNNLNLH 684

Query: 662 AGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG 703
            GL NGV   + ++ V  Q+ D+R+R++G  P K+   +V  
Sbjct: 685 VGLSNGVYNTSKINDVDSQIYDTRTRYIG--PSKVNLSIVSS 724



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 151/344 (43%), Gaps = 70/344 (20%)

Query: 929  EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIV 988
            E   SL L+H T ++    +L  F   LLA I   + L+ LGKK+LL+K    + P +I 
Sbjct: 994  ESKFSLSLVHITHIDDKIHSLTSFNDMLLAPIHGNIFLFGLGKKQLLKKSI-TVTPPSIT 1052

Query: 989  SINTYRD----RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
             + T ++    RI +GDI+ES     + ++ N     ADD   R  T    +D  T+ GA
Sbjct: 1053 KVTTIKNWNNQRIVIGDIRESIMMFIFNKERNLFIPVADDISGRATTTVEFLDESTVIGA 1112

Query: 1045 DKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGK---LNGAPN------KMEEIVQFHVG 1095
            DK+GNI+ +RL +  +  + E     +  W   K   LN  PN      K E    + V 
Sbjct: 1113 DKYGNIWTLRLSKKDNQIVNE---SNEEHWSINKKLLLNKLPNIYECPFKFELKNHYFVN 1169

Query: 1096 DVVTSLQKASLVPGGGES----VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR----- 1146
            D++    K  ++     S    +IY  + G++G ++       V   + +EM +      
Sbjct: 1170 DIIL---KFHIIKSSSFSDRPVIIYTGLQGTIGCLIPLILEKQVSSLASIEMVLSDMDEL 1226

Query: 1147 -------------------------------QEHP---------PLCGRDHMAYRSAYFP 1166
                                           ++HP          +  RDH +YRS Y P
Sbjct: 1227 FLFGNEEQREEKMLTHGEEEAYEDNNFLTDTKDHPSSKMLEGAYSIVQRDHKSYRSYYAP 1286

Query: 1167 VKDVIDGDLCEQFPTLSLDLQRKIADELDRT-PGEILKKLEEIR 1209
            VK+VIDGDLCE F  L+   Q  ++ +L++  P +I+  L EIR
Sbjct: 1287 VKNVIDGDLCESFLRLTYSEQALLSTKLEKMQPNDIIMLLNEIR 1330


>gi|195395112|ref|XP_002056180.1| GJ10363 [Drosophila virilis]
 gi|194142889|gb|EDW59292.1| GJ10363 [Drosophila virilis]
          Length = 1140

 Score =  240 bits (612), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 288/1237 (23%), Positives = 510/1237 (41%), Gaps = 168/1237 (13%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +++AR   +E  L+ PE    +  L    I G I
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG---LRPLKEININGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP--GQY 119
              +  FR   S KD + + +    ++ILE     +    + +     S    I+   G  
Sbjct: 62   TVMRHFRPPDSNKDLLFILTRRFNVMILEARMVGDAVTVVTKANGNVSDSVGILSEGGFI 121

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPK R  +IG C  Q L  ++  D  A    ++ L   +    VY +  +  G  NP
Sbjct: 122  AAIDPKAR--VIGMCLYQGLFTIIPLDKDASELKATNLRMDE--LTVYDVEFLH-GCQNP 176

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTVP 238
                I        +D+ G+     + NL   E       +   W +  V+  A ML+ VP
Sbjct: 177  TVIVIH-------KDNDGRHVKSHEINLRDKEF------IKVAWKQDNVETEATMLIPVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
                   GV+V     ++Y +    +  AV P        R   I   A    K L + L
Sbjct: 224  S---SIGGVIVIGRESIVYHDGS--NYHAVAPLTF-----RQSTINCYARVDSKGLRYLL 273

Query: 299  LQTE---YGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
               +   Y      T       V ++K++    I +   +  L +G+L+  S  G+  L 
Sbjct: 274  GNMDGQLYMLFLGTTETSKGTTVKDIKVEQLGEISIPECITYLDNGFLYIGSRHGDSQLV 333

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            +  +   D                             ++ +E   +L PI+D+ + +L  
Sbjct: 334  RLSSEAIDGSY--------------------------VIPVENFTNLAPILDIAVVDLDR 367

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE-FDAYIVV 474
            +   QI T  G     SLRI+R G+ + E A   LPG+   +W++K  ++D  ++  +V+
Sbjct: 368  QGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSLKVGIDDSAYENTLVL 426

Query: 475  SFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--I 531
            +F   T +L++ GE VEE    GF     +   + +  D L+QV    +R ++   +  +
Sbjct: 427  AFVGHTRILTLSGEEVEETEIPGFASDLQTFLCANVDYDQLIQVTAESVRLVKSATKTLV 486

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIAS 591
             EW+  G R+I  V  N  Q+V A S  E+ Y  ++  G L+E  +  +  +VACLD+  
Sbjct: 487  GEWKPEGDRSIGVVSCNSTQIV-AASAREIFYISIE-DGSLVEKCRKTLPYEVACLDVTP 544

Query: 592  VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
            + E + +S  +AVG + +   ++   PD  ++ +  + +S    P S+L          E
Sbjct: 545  LDEKQTKSELVAVGLWTDISAVILRLPD--LETIYTEKLSGEIIPRSILMTTF------E 596

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
            D        +L   L +G ++  ++D  TGQL+D +   LG +P  L +        +  
Sbjct: 597  DIN------YLLCALGDGSMYYFILDRTTGQLTDKKKVTLGTQPTTLRTFRSFSTTNVFA 650

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + + + ++ + + +  S ++    + +     N++ + TI+ + +  
Sbjct: 651  CSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSVILGTIDEI-QKL 709

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGEN------ 823
            +   +PL   PRR   Q   +   +       +    R  AK     A+   +N      
Sbjct: 710  HIRTVPLGEGPRRIAYQEASQTFAV---STLRIDVHGRGGAKPLRNSASTQAQNSSCSSN 766

Query: 824  -------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLL 876
                   GN      E G + + ++ L  +Q  +    S ++V       P + ++    
Sbjct: 767  ILPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHSHQFVP------PETISSLMSA 820

Query: 877  ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLEL 936
            +L D+   + +                  A  L F  +     G I I+ + E    L  
Sbjct: 821  KLGDDPNTYYV-----------------VATSLVFPDEPEPKVGRIIIFHYNE--NKLTQ 861

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVS--INTYR 994
            + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N    N I +  +    
Sbjct: 862  VAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECN--IQNMIAALFLKAKG 919

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            D I VGD+  S    ++++ E      A D  P+W+ A   +D DT  G +   N++  +
Sbjct: 920  DFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGCETHDNLFVCQ 979

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV------- 1107
              +D +   +E+                   + E+ +FH+GD +   +  SLV       
Sbjct: 980  --KDSAATTDEE----------------RQLLPELARFHLGDTINVFRHGSLVMQNVGER 1021

Query: 1108 --PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF 1165
              P  G  V+YGT  G++G +     +D  DF   LE  +++    +   DH  YR+   
Sbjct: 1022 TTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKSVGKIDHTYYRNYQI 1079

Query: 1166 -----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
                 P +  IDGDL E F  L+ D  R+    L+ T
Sbjct: 1080 NTKVEPSEGFIDGDLIESFLDLNRDKMREAVSGLELT 1116


>gi|194901554|ref|XP_001980317.1| GG19434 [Drosophila erecta]
 gi|190652020|gb|EDV49275.1| GG19434 [Drosophila erecta]
          Length = 1140

 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 294/1242 (23%), Positives = 517/1242 (41%), Gaps = 198/1242 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +++AR   +E  L+ PE    +  L    I G I
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG---LRPLKEININGTI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILE---YNPSKNVFDKIHQETFGKSGCRRIVP-- 116
              +  FR   S KD + + +    ++ILE    N +  V  K +       G    VP  
Sbjct: 62   AVMRHFRPPDSNKDLLFILTRRYNVMILEARMVNDAITVVTKANGNVSDSVG----VPSE 117

Query: 117  -GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
             G   A+DPK R  +IG C  Q L  ++  D  A    ++ L   + +  VY +  +  G
Sbjct: 118  GGVIAAIDPKAR--VIGMCLYQGLFTIIPLDKDASELKATNLRMDELN--VYDVEFLH-G 172

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANML 234
              NP    I        +D+ G+     + NL   E       +   W +  V+  A ML
Sbjct: 173  CMNPTVIVIH-------KDNDGRHVKSHEINLREKEF------MKIAWKQDNVETEATML 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            + VP       GV+V     ++Y +    +  AV P                 T RQ T+
Sbjct: 220  IPVPS---PIGGVIVIGRESIVYHDGS--NYHAVAP----------------LTFRQSTI 258

Query: 295  ----------FFFLLQTEYGDIFKVTL----EHDNEHVSELKIKYFDTIPVTASMCVLKS 340
                        +LL    G ++ + L          V ++K++    I +   +  L +
Sbjct: 259  NCYARVSSNGLRYLLGNMDGQLYMLFLGTAETSKGVTVKDIKVEQLGEISIPECITYLDN 318

Query: 341  GYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVE 400
            G+L+  +  G+  L +  +   D                             +V +E   
Sbjct: 319  GFLYIGARHGDSQLVRLNSEAIDGSY--------------------------VVPVENFT 352

Query: 401  SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
            +L PI+D+ + +L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W++
Sbjct: 353  NLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSL 411

Query: 461  KKNVNDE-FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            K  V++  ++  +V++F   T +L++ GE VEE    GF     +   S +  D L+QV 
Sbjct: 412  KVGVDESPYENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVT 471

Query: 519  PSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE 576
               +R +    +  + EWR  G R+I  V  N  Q+V+A S  +L Y  ++  G L E  
Sbjct: 472  SDSVRLVSSATKALVAEWRPTGDRSIGVVSCNTTQIVVA-SACDLFYIVIE-DGTLREQS 529

Query: 577  KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP--P 634
            +  +  +VACLDI  + E +K+S  +AVG + +   ++   PD  ++ +  + +S    P
Sbjct: 530  RRTLEYEVACLDITPLDETQKKSDMVAVGLWTDISAVIMSLPD--LETIYTEKLSGEIIP 587

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             S+L    +          H    +L   L +G ++  ++D  TGQL+D +   LG +P 
Sbjct: 588  RSILMTTFEGI--------H----YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPT 635

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             L +        +   S RP + Y    + + + ++ + + +  S ++    + +     
Sbjct: 636  TLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANK 695

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
            NA+ + TI+ + +  +   +PL   PRR   Q   +   +       +    R  AK   
Sbjct: 696  NAVILGTIDEI-QKLHIRTVPLGEGPRRIAYQEASQTFAV---STLRIDVHGRGGAKPLR 751

Query: 815  FEAAGMGEN-------------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSC 861
              A+   +N             GN      E G + + ++ L  +Q  +    + ++VS 
Sbjct: 752  NSASTQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQFVS- 810

Query: 862  IRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGY 921
                 P + ++    +L D+   + +               V T+  +   P+  +  G 
Sbjct: 811  -----PETISSLMSAKLGDDPNTYYV---------------VATSLVIPEEPEPKV--GR 848

Query: 922  IHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
            I I+ + E    L  + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N 
Sbjct: 849  IIIFHYHE--NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNI 906

Query: 982  LFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTM 1041
                  + +    D I VGD+  S    ++++ E      A D  P+W+ A   +D DT 
Sbjct: 907  QNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTF 966

Query: 1042 AGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSL 1101
             G++  GN++  +  +D +   +E+                   + E+ +FH+GD V   
Sbjct: 967  LGSETNGNLFVCQ--KDSAATTDEE----------------RQLLPELARFHLGDTVNVF 1008

Query: 1102 QKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPL 1152
            +  SLV         P  G  V+YGT  G++G +     +D  DF   LE  +++    +
Sbjct: 1009 RHGSLVMQNVGERTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKSV 1066

Query: 1153 CGRDHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRK 1189
               +H  YR+        P +  IDGDL E F    LDL R+
Sbjct: 1067 GKIEHTYYRNFQINTKVEPSEGFIDGDLIESF----LDLGRE 1104


>gi|195571247|ref|XP_002103615.1| GD18880 [Drosophila simulans]
 gi|194199542|gb|EDX13118.1| GD18880 [Drosophila simulans]
          Length = 1140

 Score =  239 bits (611), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 296/1247 (23%), Positives = 521/1247 (41%), Gaps = 188/1247 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +++AR   +E  L+ PE    +  L    I G I
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG---LRPLKEININGTI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP--GQY 119
              +  FR   S KD + + +    ++ILE     +V   + +     S    I+   G  
Sbjct: 62   AVMRHFRPPDSNKDLLFILTRRYNVMILEARMVNDVITVVTKANGNVSDSVGILSAGGVI 121

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+D K R  +IG C  Q L  ++  D  A    ++ L   + +  VY +  +  G  NP
Sbjct: 122  AAIDLKAR--VIGMCLYQGLFTIIPMDKDASELKATNLRMDELN--VYDVEFLH-GCLNP 176

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTVP 238
                I        +D+ G+     + NL   E       +   W +  V+  A ML+ VP
Sbjct: 177  TVIVIH-------KDNDGRHVKSHEINLRDKEF------MKIAWKQDNVETEATMLIPVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL---- 294
                   GV+V     ++Y +    +  AV P                 T RQ T+    
Sbjct: 224  S---PIGGVIVIGRESIVYHDGS--NYHAVAP----------------LTFRQSTINCYA 262

Query: 295  ------FFFLLQTEYGDIFKVTL----EHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
                    +LL    G ++ + L          V ++K++    I +   +  L +G+L+
Sbjct: 263  RVSSNGLRYLLGNMDGQLYMLFLGTAETSKGVTVKDIKVEQLGEISIPECITYLDNGFLY 322

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
              +  G+  L +  +   D                             +V +E   +L P
Sbjct: 323  IGARHGDSQLVRLNSEAIDGSY--------------------------VVPVENFTNLAP 356

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            I+D+ + +L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W++K  V
Sbjct: 357  ILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSLKVGV 415

Query: 465  NDE-FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
            ++  ++  +V++F   T +L++ GE VEE    GF     +   S +  D L+QV    +
Sbjct: 416  DESPYENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSV 475

Query: 523  RHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
            R +    +  + EWR  G R+I  V  N  Q+++A S  ++ Y  ++  G L E  +  +
Sbjct: 476  RLVSSATKALVAEWRPTGDRSIGVVSCNTTQILVA-SACDIFYIVIE-DGNLREQCRRTL 533

Query: 581  SGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESL 637
            + +VACLDI  + E +K+S  +AVG + D +  ILSL PD  ++ +  + +S    P S+
Sbjct: 534  AYEVACLDITPLDETQKKSDLVAVGLWTDISAVILSL-PD--LETIYTEKLSGEIIPRSI 590

Query: 638  LFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
            L    +          H    +L   L +G ++  ++D  TGQL+D +   LG +P  L 
Sbjct: 591  LMTTFEGI--------H----YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLR 638

Query: 698  SVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
            +        +   S RP + Y    + + + ++ + + +  S ++    + +     NA+
Sbjct: 639  TFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANKNAV 698

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
             + TI+ + +    T +PL   PRR   Q   +   +       +    R  AK     A
Sbjct: 699  ILGTIDEIQKLHIRT-VPLGEGPRRIAYQESSQTFAV---STLRIDVHGRGGAKPLRNSA 754

Query: 818  AGMGEN-------------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRV 864
            +   +N             GN      E G + + ++ L  +Q  +    + ++VS    
Sbjct: 755  STQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQFVS---- 810

Query: 865  LDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHI 924
              P + ++    +L D+   + +               V T+  +   P+  +  G I I
Sbjct: 811  --PETISSLMSAKLGDDPNTYYV---------------VATSLVIPEEPEPKV--GRIII 851

Query: 925  YRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP 984
            + + E    L  + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N    
Sbjct: 852  FHYNE--NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNIQNM 909

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
               + +    D I VGD+  S    ++++ E      A D  P+W+ A   +D DT  G+
Sbjct: 910  IAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGS 969

Query: 1045 DKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKA 1104
            +  GN++  +  +D +   +E+                   + E+ +FH+GD V   +  
Sbjct: 970  ETNGNLFVCQ--KDSAATTDEE----------------RQLLPELARFHLGDTVNVFRHG 1011

Query: 1105 SLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGR 1155
            SLV         P  G  V+YGT  G++G +     +D  DF   LE  +++    +   
Sbjct: 1012 SLVMQNVGERTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKSVGKI 1069

Query: 1156 DHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            +H  YR+        P +  IDGDL E F  LS D  R     L+ T
Sbjct: 1070 EHTYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMRDAVQGLELT 1116


>gi|449435512|ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like [Cucumis sativus]
          Length = 1093

 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 284/1240 (22%), Positives = 529/1240 (42%), Gaps = 185/1240 (14%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            ++ Y +T  +PT +  +  GNF+G +   +++A+   +E+      G ++ ++   I+G 
Sbjct: 3    VWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTAQG-LQPMLDVPIYGR 61

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQY 119
            I +L  FR  G  +D++ + ++  +  +L+++  S  +  +   +   + G R    GQ 
Sbjct: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDTESSELITRAMGDVSDRIG-RPTDSGQI 120

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
              +DP  R  +IG      L  V+  D   +L  +  +   +   +         G   P
Sbjct: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCSRP 175

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSEP-VDNGANMLVTV 237
                +  D  +A             +++  YE+ L   + V   WS+  +DNGA +L+ V
Sbjct: 176  TIVVLYQDNKDA-------------RHVKTYEVVLKDKDFVEGPWSQNNLDNGAAVLIPV 222

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
            P       GV++  E  ++Y +         IP R  +    G   V A   R      +
Sbjct: 223  P---PPLCGVIIIGEETIVYCS---ATAFKAIPVRPSITRAYGR--VDADGSR------Y 268

Query: 298  LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            LL    G +  + + H+ E V+ LKI+      + +++  L + +++  S +G+  L + 
Sbjct: 269  LLGDHAGLLHLLVITHEKERVTGLKIELLGETSIASTISYLDNAFVYIGSSYGDSQLVK- 327

Query: 358  QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE 417
              +   PD + S   ++E                      +  +L PI+D  + +L  + 
Sbjct: 328  --LNVQPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLERQG 363

Query: 418  APQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFN 477
              Q+ T  G     SLR++R G+ ++E A  +L G+   +W+++ + +D FD ++VVSF 
Sbjct: 364  QGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFI 422

Query: 478  NAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INE 533
            + T  L +++ + +EE    GF     +L       + L+QV  S +R +    R  +NE
Sbjct: 423  SETRILAMNLEDELEETEIEGFNSQVQTLFCHDALFNQLVQVTSSSVRLVSSTTRELLNE 482

Query: 534  WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVP 593
            W  P   +I    +N  QV++A  GG L++ E+   G L+E +  ++  +++CLDI  + 
Sbjct: 483  WNAPSNYSINVATANASQVLLATGGGVLVHLEI-CDGLLVEKKHIQLEHEISCLDINPIG 541

Query: 594  EGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGED 650
            +    S+  AVG + D ++RI SL PD  + +L+ + +     P S+L    +       
Sbjct: 542  DNPNCSQLAAVGMWTDISVRIFSL-PD--LNLLTKEQLGGEIIPRSVLLCTFE------- 591

Query: 651  GADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCL 710
            G  +      +  L N +L  T  +  + +L D +   LG +P  L +        +   
Sbjct: 592  GISYLLCALGDGHLLNFIL-NTNSNSNSCELMDRKKVSLGTQPITLRTFSSKNATHVFAA 650

Query: 711  SSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFN 770
            S RP + Y    + L + ++ + + +   F+S    + +       L + TI+ + +  +
Sbjct: 651  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLH 709

Query: 771  ETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQ 830
              ++PL    RR   Q + +                        F    +  N +G    
Sbjct: 710  IRSIPLGEHARRICHQEQSR-----------------------TFAICSLRYNQSGT--- 743

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTV 890
                                     D  +  IR+LD ++  +     L   E   SI + 
Sbjct: 744  ------------------------EDTEMHFIRLLDDQTFESISTYALDTYEYGCSILSC 779

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLAL 949
            +F D ++     VGTA  +   P+ N    G I ++  VEEGK L+L+ + + +G   +L
Sbjct: 780  SFSD-DNNVYYCVGTAYVM---PEENEPTKGRILVF-VVEEGK-LQLIAEKETKGSVYSL 833

Query: 950  CQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
              F G+LLA I   ++LY     D G + L  +C +      +  + T  D I VGD+ +
Sbjct: 834  NAFNGKLLAAINQKIQLYKWTLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMK 892

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S     Y+ +E  +   A D    W++A   +D D   GA+ + N++ VR          
Sbjct: 893  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENYFNLFTVR---------- 942

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVIYG 1117
                    K  +G  +   +++E + ++H+G+ V   Q  SLV        G   +VI+G
Sbjct: 943  --------KNSEGATDEERSRLEVVGEYHLGEFVNRFQHGSLVMRLPDSDVGQIPTVIFG 994

Query: 1118 TVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVID 1172
            +V G +G ++A    D   F   L+ ++R+    + G  H  +RS          K+ +D
Sbjct: 995  SVNGVIG-VIASLPHDQYVFLERLQSNLRKVIKGVGGLSHEQWRSFNNEKRTAEAKNFLD 1053

Query: 1173 GDLCEQFPTLSLDLQRKIADELDR----TPGEILKKLEEI 1208
            GDL E F    LDL R   +E+ R    +  E+ K++EE+
Sbjct: 1054 GDLIESF----LDLNRSKMEEISRAMSVSAEELCKRVEEL 1089


>gi|255080490|ref|XP_002503825.1| predicted protein [Micromonas sp. RCC299]
 gi|226519092|gb|ACO65083.1| predicted protein [Micromonas sp. RCC299]
          Length = 1114

 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 287/1256 (22%), Positives = 525/1256 (41%), Gaps = 196/1256 (15%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFG 59
            Y Y +T Q+PT +  ++ GNF+      ++VA+   +E  +L P+    ++ +    ++G
Sbjct: 3    YNYVVTAQKPTSVTHSLVGNFTHDNELNLIVAKCTRIEIHMLTPDG---LQPMHDVPVYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             I  +  +R  G ++  + V ++     +L Y+ +              +  R    G  
Sbjct: 60   RIAVMKLYRPAGEKRQLLYVATERLMFCVLAYDQTSGAIATRAMGDLSNTIGRPCEHGLI 119

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
              VDP+ R  +IG+     L  V+  D A +L  +  +   + + +         G   P
Sbjct: 120  GEVDPECR--LIGSQAYDGLFKVVPMDRAGQLREAFDVRLEELNVVDVKFMH---GCATP 174

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR-KWSEP-VDNGANMLVTV 237
                +  D  EA             +++  YE+D+    +    WS+  V+ G+++++ V
Sbjct: 175  TICVLYEDTKEA-------------RHVKTYEVDVKEKTLRDGPWSQSDVEGGSSLIIPV 221

Query: 238  PGGGDGP-SGVLVCAENFVIY--KNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            P     P  G +V  E+ ++Y  K+ G+    A+  +  ++ A     +V A   R    
Sbjct: 222  PA----PLGGAIVVGESVIVYLNKDGGNGAGGAIATKSVNVMAHG---VVDADGSR---- 270

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
              +LL    G +  + L HD   V  LK++      + +++  L +G ++  S +G+  L
Sbjct: 271  --YLLSDSTGMLHLLVLVHDRRRVHALKLESLGQTSIASTLSYLDNGVVYVGSAYGDSQL 328

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
             +  A      V  ++  +  T          P GL  +  +E   +L PI+D  + +L 
Sbjct: 329  VRLHA----QPVRCAADQVPAT----------PDGLTYVECLESFTNLGPIVDFAVVDLD 374

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN--VNDEFDAYI 472
                 Q+ T  G     SLR++R G+ + E A  +LPGV    W++++        D ++
Sbjct: 375  RHGQGQVVTCSGVNKDGSLRVVRNGVGIHERAAIELPGV-KGCWSLRRGDASTHPSDTHL 433

Query: 473  VVSFNNATLVLSIGETVE--EVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR-EDG 529
            VVSF   T +L+I +  E  E    GF     +L V  +    ++Q   SG+R +   DG
Sbjct: 434  VVSFAGETRILAIDDDDELAECEFRGFSANEQTLCVCNVDGGFVVQCVASGVRLVNAADG 493

Query: 530  RINE-WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG-DVACL 587
                 W  PG  T+    +NR Q ++A +GG L    +     + E     + G ++ACL
Sbjct: 494  EPRATWSPPGGATVSVASANRTQALVATTGGSLYSLALGSAALIRETASASLDGKEIACL 553

Query: 588  DIASVPE-GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP-----PESLLFLE 641
            D   + + G   +R  AVG++   + +L++ PD  +++++   +        P ++L   
Sbjct: 554  DCTPLSDPGDAAARLCAVGTWTAEVFLLTM-PD--LRLVTTSPLGGGGGGVIPRAVLLCS 610

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
             +       G  H     L AGL +G L    VD   G L D +S  LG +P  L +   
Sbjct: 611  FE-------GTPH-----LLAGLGDGALHTFGVDPEAGTLRDGKSLSLGTQPITLRTFRS 658

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
             G   +   S RP + Y + G+ + + ++   + +A  F+ D   + +   + + L +  
Sbjct: 659  KGATHVFAGSDRPTVIYGNNGKLIYSNVNLREVLHACPFNCDAFPDSLALASESDLTIGG 718

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMG 821
            I+ + +  +   +PL   PRR   QP+ +                  AA  E F      
Sbjct: 719  IDDI-QKLHIRTVPLGEQPRRIAHQPETRTY----------------AALTENF------ 755

Query: 822  ENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDN 881
                          DEN Y                     +R+ D  +  T C   L+ +
Sbjct: 756  --------------DENGY--------------------FVRLFDDVTFETLCKFRLEPD 781

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            E   S+ +  F D        VGT   L   P+     G I ++R  E+GK L+L+ + +
Sbjct: 782  EQDSSVISCAFADDPR-VYYVVGTGYSLPEEPEPT--RGRILVFR-AEDGK-LQLVAEKE 836

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKK-----------RLLRKCENKLFPNTIVS- 989
            V+G    L  F G+LLAGI   + L+  G              L ++C +      IV+ 
Sbjct: 837  VKGAVYNLNAFNGKLLAGINSKVELFRGGDPVGADGAGGSTYELAKECSHH---GHIVAL 893

Query: 990  -INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
             +    + I VGD+ +S     Y+ +E+ +   A D    W+TA   +D DT  GA+   
Sbjct: 894  YVAVRGEFIVVGDLMKSVSLLAYKPEESVIEERARDYNANWMTAVDILDDDTYLGAENNF 953

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV- 1107
            N++ +R   D + + E                   +++E + ++HVG+ V   ++ SLV 
Sbjct: 954  NLFTLRRQSDAATDEER------------------SRLEVVGEYHVGEFVNRFRRGSLVM 995

Query: 1108 ------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
                       ++++GTV G +G +LA   R+  +F S L+  + +    + G  H A+R
Sbjct: 996  RLPDQENADVPTLLFGTVSGVIG-VLATLPREQFEFLSALQAALNKTVSGVGGLSHDAWR 1054

Query: 1162 S--------AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            S        A    +  +DGDL E F  L  +  R++A  +  +  E+ +++E+++
Sbjct: 1055 SFQNEHRHRAKDGARGFVDGDLIESFLDLRPEKAREVAAAVKLSVDELTRRVEDLQ 1110


>gi|297740793|emb|CBI30975.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score =  237 bits (604), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 273/1172 (23%), Positives = 499/1172 (42%), Gaps = 180/1172 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+G +   +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    VWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR  G  +D++ + ++  +  +L+++   + V  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVITRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCS 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVT 236
             P    +  D  +A    T + A + +            + V   W++  +DNGA++L+ 
Sbjct: 174  KPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWAQNNLDNGADLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GVL+  E  ++Y +         IP R  +    G   V A   R      
Sbjct: 222  VP---PPLCGVLIIGEETIVYCS---ASAFKAIPIRPSITKAYGR--VDADGSR------ 267

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + + H+ E V+ LKI+      + +++  L + +++  S +G+  L +
Sbjct: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAFVYVGSSYGDSQLIK 327

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               I   PD + S   ++E                      +  +L PI+D  + +L  +
Sbjct: 328  ---IHLQPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLERQ 362

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLRI+R G+ ++E A  +L G+   +W+++ + +D  D ++VVSF
Sbjct: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPHDTFLVVSF 421

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GF     +L       D L+QV  S +R +    R   N
Sbjct: 422  ISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELRN 481

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            EW+ P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  D++CLDI  +
Sbjct: 482  EWKAPSGYSVNVATANATQVLLATGGGHLVYLEIG-DGTLTEVKHAQLEYDISCLDINPI 540

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
             E    S+  AVG + D ++RI SL PD  + +++ + +     P S+L    +      
Sbjct: 541  GENPNFSQLAAVGMWTDISVRIFSL-PD--LNLITKEYLGGEIIPRSVLLCSFEGIP--- 594

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G L   +++M TG+L+D +   LG +P  L +        +  
Sbjct: 595  ---------YLLCALGDGHLLNFLLNMSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 645

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + L + ++ + + +   F+S    + +       L + TI+ + +  
Sbjct: 646  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTIGTIDDI-QKL 704

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            +  ++PL    RR   Q + +   I                                   
Sbjct: 705  HIRSIPLGEHARRICHQEQSRTFAICSL-------------------------------- 732

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
                     KY+  S E         D  +  IR+LD ++        L   E   SI +
Sbjct: 733  ---------KYNQSSTE---------DSEMHFIRLLDDQTFEFISTYPLDTFEYGCSILS 774

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             +F D +      VGTA  L   P+ N    G I ++  VE+GK L+L+ + + +G   +
Sbjct: 775  CSFSD-DSNVYYCVGTAYVL---PEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYS 828

Query: 949  LCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGDI 1002
            L  F G+LLA I   ++LY     D G + L  + E+    + + + + T  D I VGD+
Sbjct: 829  LNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSESGHHGHILALYVQTRGDFIVVGDL 886

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
             +S     Y+ +E  +   A D    W++A   +D D   GA+   NI+ VR        
Sbjct: 887  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVR-------- 938

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVI 1115
                      K  +G  +    ++E + ++H+G+ V   +  SLV        G   +VI
Sbjct: 939  ----------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 988

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ 1147
            +GTV G +G ++A    D   F   L+ ++R+
Sbjct: 989  FGTVNGVIG-VIASLPHDQYVFLEKLQANLRK 1019


>gi|125774475|ref|XP_001358496.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
 gi|54638233|gb|EAL27635.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
          Length = 1140

 Score =  236 bits (603), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 293/1244 (23%), Positives = 522/1244 (41%), Gaps = 200/1244 (16%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +++AR   +E  L+ PE    +  L    I G +
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG---LRPLKEININGTV 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILE---YNPSKNVFDKIHQETFGKSGCRRIVP-- 116
              +  FR   S KD + + +    ++ILE    N S  V  K +      +G    +P  
Sbjct: 62   AVMRHFRPPDSNKDLLFILTRRYNVMILEARMVNDSITVITKANGNVSDSAG----IPSE 117

Query: 117  -GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC- 174
             G   A+DPK R  +IG    Q L  ++  D  A     S L+A        S+  ++  
Sbjct: 118  GGVIAAIDPKAR--VIGMVLYQGLFTIIPMDKEA-----SELKATNLRMDELSVYDVEFL 170

Query: 175  -GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGAN 232
             G  NP    I        +D+ G+     + NL   E       +   W +  V+  A 
Sbjct: 171  HGCLNPTIIVIH-------KDNDGRHVKSHEINLREKEF------MKIAWKQDNVETEAT 217

Query: 233  MLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQK 292
            ML+ VP       GV+V     ++Y +    +  AV P                 T RQ 
Sbjct: 218  MLIPVPS---PIGGVIVIGRESIVYHDGS--NYHAVAP----------------LTFRQS 256

Query: 293  TL----------FFFLLQTEYGDIFKVTLEHDNEH----VSELKIKYFDTIPVTASMCVL 338
            T+            +LL    G ++ + L          V ++K++    I +   +  L
Sbjct: 257  TINCYARVDGKGLRYLLGNMDGQLYMLFLGTSETSKGVTVKDIKVEKLGEISIPECITYL 316

Query: 339  KSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQ 398
             +G+L+  +  G+  L +  +               E+ EG             ++ +E 
Sbjct: 317  DNGFLYIGARHGDSQLVRLSS---------------ESIEG-----------SYVIPVEN 350

Query: 399  VESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVW 458
              +L PI+D+ + +L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W
Sbjct: 351  FTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMW 409

Query: 459  TVKKNVNDE-FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQ 516
            ++K  +++  ++  +V++F   T +L++ GE VEE    GF     +   + +  D L+Q
Sbjct: 410  SLKVGIDESPYENTLVLAFVGLTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQLIQ 469

Query: 517  VHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE 574
            V    +R ++   +  I EWR  G R+I  V  N  Q+V+A S  ++ Y  ++  G+L+E
Sbjct: 470  VTSDSVRLVKSATKALICEWRPEGDRSIGVVSCNSTQIVLA-SARDIFYIVIE-DGRLVE 527

Query: 575  VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP 633
              +  ++ +VACLDI  + E + +S  +AVG + D +  ILSL PD  ++ +  + +S  
Sbjct: 528  KSRKTLAYEVACLDITPLDETQNKSDLIAVGLWTDISAVILSL-PD--LETIYTEKLSGE 584

Query: 634  --PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGL 691
              P S+L    +          H    +L   L +G ++  ++D  TGQL+D +   LG 
Sbjct: 585  IIPRSILMTTFEGI--------H----YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGT 632

Query: 692  RPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVS 751
            +P  L +        +   S RP + Y    + + + ++ + + +  S ++    + +  
Sbjct: 633  QPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLAL 692

Query: 752  VAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAK 811
               N++ + TI+ + +    T +PL   PRR   Q   +   +       +    R  AK
Sbjct: 693  ATKNSVILGTIDEIQKLHIRT-VPLGEGPRRIAYQEASQTFAV---STLRIDVHGRGGAK 748

Query: 812  KECFEAAGMGEN-------------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKW 858
                 A+   +N              N      E G + + ++ L  +Q  +    + ++
Sbjct: 749  PLRNSASTQAQNITCSSNILPKPGGNNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQF 808

Query: 859  VSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIV 918
            V+      P + ++    +L D+   + +               V T+  +   P+  + 
Sbjct: 809  VA------PETISSLMSAKLGDDPNTYYV---------------VATSLVIPDEPEPKV- 846

Query: 919  AGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC 978
             G I I+ +      L  + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR  
Sbjct: 847  -GRIIIFHY--HDNKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRME 903

Query: 979  ENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDF 1038
             N       + +    D I VGD+  S    ++++ E      A D  P+W+ A   +D 
Sbjct: 904  CNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDD 963

Query: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
            DT  G++  GN++  +  +D +   +E+                   + E+ +FH+GD V
Sbjct: 964  DTFLGSETNGNLFVCQ--KDSAATTDEE----------------RQLLPELARFHLGDTV 1005

Query: 1099 TSLQKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEH 1149
               +  SLV         P  G  V+YGT  G++G +     +D  DF   LE  +++  
Sbjct: 1006 NVFRHGSLVMQNVGERTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKII 1063

Query: 1150 PPLCGRDHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQR 1188
              +   +H  YR+        P +  IDGDL E F  LS D  R
Sbjct: 1064 KSVGKIEHTYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMR 1107


>gi|195145844|ref|XP_002013900.1| GL24391 [Drosophila persimilis]
 gi|194102843|gb|EDW24886.1| GL24391 [Drosophila persimilis]
          Length = 1140

 Score =  236 bits (603), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 292/1242 (23%), Positives = 523/1242 (42%), Gaps = 196/1242 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +++AR   +E  L+ PE    +  L    I G +
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG---LRPLKEININGTV 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILE---YNPSKNVFDKIHQETFGKSGCRRIVP-- 116
              +  FR   S KD + + +    ++ILE    N S  V  K +      +G    +P  
Sbjct: 62   AVMRHFRPPDSNKDLLFILTRRYNVMILEARMVNDSITVITKANGNVSDSAG----IPSE 117

Query: 117  -GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
             G   A+DPK R  +IG    Q L  ++  D  A    ++ L   + +  VY +  +  G
Sbjct: 118  GGVIAAIDPKAR--VIGMVLYQGLFTIIPMDKEASELKATNLRMDELN--VYDVEFLH-G 172

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANML 234
              NP    I        +D+ G+     + NL   E       +   W +  V+  A ML
Sbjct: 173  CLNPTIIVIH-------KDNDGRHVKSHEINLREKEF------MKIAWKQDNVETEATML 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            + VP       GV+V     ++Y +    +  AV P                 T RQ T+
Sbjct: 220  IPVPS---PIGGVIVIGRESIVYHDGS--NYHAVAP----------------LTFRQSTI 258

Query: 295  ----------FFFLLQTEYGDIFKVTLEHDNEH----VSELKIKYFDTIPVTASMCVLKS 340
                        +LL    G ++ + L          V ++K++    I +   +  L +
Sbjct: 259  NCYARVDGKGLRYLLGNMDGQLYMLFLGTSETSKGVTVKDIKVEKLGEISIPECITYLDN 318

Query: 341  GYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVE 400
            G+L+  +  G+  L +  +               E+ EG             ++ +E   
Sbjct: 319  GFLYIGARHGDSQLVRLSS---------------ESIEG-----------SYVIPVENFT 352

Query: 401  SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
            +L PI+D+ + +L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W++
Sbjct: 353  NLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSL 411

Query: 461  KKNVNDE-FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            K  +++  ++  +V++F   T +L++ GE VEE    GF     +   + +  D L+QV 
Sbjct: 412  KVGIDESPYENTLVLAFVGLTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQLIQVT 471

Query: 519  PSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE 576
               +R ++   +  I EWR  G R+I  V  N  Q+V+A S  ++ Y  ++  G+L+E  
Sbjct: 472  SDSVRLVKSATKALICEWRPEGDRSIGVVSCNSTQIVLA-SARDIFYIVIE-DGRLVEKS 529

Query: 577  KHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP-- 633
            +  ++ +VACLDI  + E + +S  +AVG + D +  ILSL PD  ++ +  + +S    
Sbjct: 530  RKTLAYEVACLDITPLDETQNKSDLIAVGLWTDISAVILSL-PD--LETIYTEKLSGEII 586

Query: 634  PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
            P S+L    +          H    +L   L +G ++  ++D  TGQL+D +   LG +P
Sbjct: 587  PRSILMTTFEGI--------H----YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQP 634

Query: 694  PKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVA 753
              L +        +   S RP + Y    + + + ++ + + +  S ++    + +    
Sbjct: 635  TTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALAT 694

Query: 754  GNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKE 813
             N++ + TI+ + +    T +PL   PRR   Q   +   +       +    R  AK  
Sbjct: 695  KNSVILGTIDEIQKLHIRT-VPLGEGPRRIAYQEASQTFAV---STLRIDVHGRGGAKPL 750

Query: 814  CFEAAGMGEN-------------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVS 860
               A+   +N              N      E G + + ++ L  +Q  +    + ++V+
Sbjct: 751  RNSASTQAQNITCSSNILPKPGGNNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQFVA 810

Query: 861  CIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAG 920
                  P + ++    +L D+   + +               V T+  +   P+  +  G
Sbjct: 811  ------PETISSLMSAKLGDDPNTYYV---------------VATSLVIPDEPEPKV--G 847

Query: 921  YIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN 980
             I I+ +      L  + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N
Sbjct: 848  RIIIFHY--HDSKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECN 905

Query: 981  KLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDT 1040
                   + +    D I VGD+  S    ++++ E      A D  P+W+ A   +D DT
Sbjct: 906  IQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDT 965

Query: 1041 MAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTS 1100
              G++  GN++  +  +D +   +E+                   + E+ +FH+GD V  
Sbjct: 966  FLGSETNGNLFVCQ--KDSAATTDEE----------------RQLLPELARFHLGDTVNV 1007

Query: 1101 LQKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPP 1151
             +  SLV         P  G  V+YGT  G++G +     +D  DF   LE  +++    
Sbjct: 1008 FRHGSLVMQNVGERTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKS 1065

Query: 1152 LCGRDHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQR 1188
            +   +H  YR+        P +  IDGDL E F  LS D  R
Sbjct: 1066 VGKIEHTYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMR 1107


>gi|91087281|ref|XP_975549.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
            castaneum]
 gi|270010588|gb|EFA07036.1| hypothetical protein TcasGA2_TC010010 [Tribolium castaneum]
          Length = 1149

 Score =  236 bits (601), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 289/1241 (23%), Positives = 510/1241 (41%), Gaps = 164/1241 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFG 59
            Y Y +T  +PT + A + GNF+      ++VA+   LE  L+ PE    +  +    ++G
Sbjct: 3    YHYVVTAHKPTAVTACVTGNFTSPGDLNLIVAKNTKLEIYLVTPEG---LRPVKEVALYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILE-YNPSKN--VFDKIHQETFGKSGCRRIVP 116
             +  +  FR    +KD + + +     +ILE  N + N  +  K H     K G +    
Sbjct: 60   KVAVMKLFRPQHEKKDLLFIVTMRYNAMILECVNDADNLDIITKAHGNVADKIG-KPSET 118

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            G    +DPK R + +   +    +  L +D +     +  ++  + H + +       G 
Sbjct: 119  GILAVIDPKARVIGLRLYDGLFKIIPLEKDNSELKASNIRIDELQVHDVEFL-----HGC 173

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLV 235
             NP    I        QD  G+     + +L   E       V   W  + V+  A+M++
Sbjct: 174  ANPTLILIH-------QDVNGRHVKTHEISLREKEF------VKVPWRQDNVETEASMII 220

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL- 294
             VP    G   +++  EN ++Y +   P                  ++V+ A  +Q T+ 
Sbjct: 221  PVPSPLGG--AIIIGQEN-ILYHDGITP------------------VVVAPAVIKQSTIV 259

Query: 295  ---------FFFLLQTEYGDIFKVTLEHDN-----EHVSELKIKYFDTIPVTASMCVLKS 340
                       +LL    G +F + LE DN     + V +LK++    I     +  L +
Sbjct: 260  CYAKVDPGGLRYLLGDMAGHLFMLFLEVDNRGDGNDVVKDLKVELLGEIATPECITYLDN 319

Query: 341  GYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVE 400
            G LF  S  G+  L +       P+   S  T+ME+                        
Sbjct: 320  GVLFIGSRLGDSQLVKLTT---KPNESGSYVTVMES----------------------FT 354

Query: 401  SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
            +L PI+DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +
Sbjct: 355  NLAPILDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGI-KGMWAL 413

Query: 461  KKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP 519
            +   +  +D  +V++F   T VLS+ GE VEE   +GF     +     +  + ++Q+ P
Sbjct: 414  QVASDGRYDNTLVLAFVGQTRVLSLNGEEVEETDIAGFASDQQTFFCGNVIHEQIVQITP 473

Query: 520  SGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEK 577
               R I    +  + EW+ P  + I  V  N  Q+V++ +G  L Y E+    +L+    
Sbjct: 474  ISARLISAQNKTLLAEWKPPSDKNIAVVACNTCQIVVS-TGSILYYIEIHQ-NELIMKGV 531

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPES 636
              +  +VACLDI+ + +G   S ++AVG + D T RIL + PD              P S
Sbjct: 532  TTLDVEVACLDISPLGDGVTTSEYIAVGLWTDITARILRI-PDLSEATKEYLGGEIIPRS 590

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            +L    +               +L   L +G +F  V    TG LSD +   LG +P  L
Sbjct: 591  VLMTCFEGHS------------YLLCALGDGSMFYFVFHKDTGTLSDKKRVTLGTQPTVL 638

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
             +        +   S RP + Y    + + + ++ + + +  S +++   + +     ++
Sbjct: 639  RTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNMKEVNHMCSLNAEAYPDSLALATDSS 698

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFE 816
            + + TI+ + +  +   +PL+ +P+R   Q + +         G LTA            
Sbjct: 699  VTIGTIDEI-QKLHIRTVPLQESPKRIAYQEESQTF-------GVLTARIDIQDSTGLNP 750

Query: 817  AAGMGENGNGNMDQMENGDDENKYDPLSDEQYG---YPKAESDKWVSCIRVLDPRSANTT 873
            A         +     +    +     S    G    P    +  V  + ++D  +    
Sbjct: 751  ARPSASTMAQSTTSSSSVGSLSMSKSGSSSLIGGNIIPDYGQEVEVHNLLIIDQHTFEVL 810

Query: 874  CLLELQDNEAAFSICTVNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEG 931
               +L   E A SI + N    +      VGTA     +  PK+    G I I+++    
Sbjct: 811  HAHQLMQQEYAMSIISTNRLGGDMNEYYIVGTATVNPEESEPKQ----GRILIFQW--ND 864

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSI 990
              L  + + +++G   +L +F G+LLA I   +RL++   ++ LR  E   F N + + +
Sbjct: 865  NKLTQVSEKEIKGACYSLAEFNGKLLASINSTVRLFEWTVEKELR-LECSHFNNILTLFL 923

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             T  D I +GD+  S    +Y+  E      A D  P W+TA   +D D   GA+   NI
Sbjct: 924  KTKGDFILLGDLMRSMTLLQYKTMEGSFEEIARDYNPNWMTAVEILDDDIFLGAENSFNI 983

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV--- 1107
            +  +  +D +   +E+ +                +M E+ +FHVGD++   +  SLV   
Sbjct: 984  FVCQ--KDSAATTDEERS----------------QMHEVGRFHVGDMINVFRHGSLVMQN 1025

Query: 1108 ------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
                  P  G  V++GTV G++G ++   ++D  DF   L+  +      +   DH  +R
Sbjct: 1026 LGETSTPTTG-CVLFGTVSGAIG-LVTQITQDFYDFLLELQNKLSTVIKSVGKIDHSQWR 1083

Query: 1162 S-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            +        P +  IDGDL E F  LS D  +++AD L  T
Sbjct: 1084 AFNTDIKTEPSEGFIDGDLIESFLDLSHDKMKEVADGLQIT 1124


>gi|207342522|gb|EDZ70265.1| YML049Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 1267

 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 196/785 (24%), Positives = 369/785 (47%), Gaps = 122/785 (15%)

Query: 56  EIFGAIRSLAQFRL--TGSQKD------YIVVGSDSGRIVILE--YNPSKNVFDKIHQET 105
            +F  I S+    L  +GS+        ++ V SDSG + I++   +        +  + 
Sbjct: 25  NLFATITSMKSLDLPHSGSRAKASNWPTFLAVTSDSGNLSIVQIIMHAGALRLKTLVNQP 84

Query: 106 FGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTI 165
             ++  RR+ P  Y+ +DP GR +++ + E+ KL +++  D A +L ISSPLE  + H +
Sbjct: 85  LTRTTLRRVSPISYMEIDPNGRCIILSSVEQNKLCFLV--DYAQKLRISSPLEIIRPHMV 142

Query: 166 VYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE 225
              +  +D  F+NP F  +E+D           AA++   +L FY L+LGLNH+ +K   
Sbjct: 143 TLDMAVVDVNFNNPCFVTLEID----------NAATQLSVHLIFYVLELGLNHIVKKADY 192

Query: 226 PVDNGANMLVTVP-------------GGGDGPSG------VLVCAENFVIYKN-QGHPDV 265
            V+  AN ++++P                D          V++  EN ++ K+  G   +
Sbjct: 193 LVNPSANFVLSLPDLSRYNITTSLSDNNYDADYDTLFNPFVVIGFENHILVKDMNGFFSL 252

Query: 266 RAVIPRRADLPA-ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE--LK 322
           +  IP+R+   +  + V I+S    + K  FF LLQ+ +GD+FK+T+  D    +   ++
Sbjct: 253 KVEIPKRSITNSRHKNVTIISGIVQKLKNDFFVLLQSNHGDLFKLTVSPDTNDRNRPLVQ 312

Query: 323 IKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQP 382
           + YFDTI  +  + + K+GYLFA SE  N+ L+QF+ +G + +     S ++ +++  + 
Sbjct: 313 LSYFDTIQNSHQLHIFKNGYLFALSEMNNNFLFQFEKLGVEKN---DFSNVLTSKDPNKS 369

Query: 383 VFFQPR-GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLA 441
           + F+P   L+NL  + Q  +L P +  +I +    ++P +         + +  L   + 
Sbjct: 370 LVFEPSIKLQNLSILSQQLNLNPSIKSQIVS----DSP-LSIATKHFTNNKIITLTNAVN 424

Query: 442 VSEMAVSQLPGVPSAVWTV-KKNVNDEFDAYIVVSFNNATLVLSI-GETVEEV-----SD 494
            S +  + LP   + +W +       + +  + ++F   T++L I  E++EE+     + 
Sbjct: 425 YSNLISTSLPPNATKLWLIPDPATTGDNNTLLFITFPKKTMILQIDNESMEELTPDEATR 484

Query: 495 SGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN-----EWRTPGKRTIVKVGSN 548
           S F L    ++   L+G  S++QV  + +RHI   G+        W  P    IV   S+
Sbjct: 485 SAFKLSQDTTIHTCLMGSHSIIQVCTAELRHIVPTGKSRYSNKLTWVPPAGIRIVCATSS 544

Query: 549 RLQVVIALSGGELIYFEVDMTG-QLLEVEKH----EMSGDVACLDIASVPEGRKRSRFLA 603
           + Q++I+LS  EL+YF++D++   L+E+  H     M   VA      + +  + +  LA
Sbjct: 545 KTQLIISLSNYELVYFKIDVSSDSLIELTTHPELDTMPSKVA------IVQDTQHADLLA 598

Query: 604 VGSYDNTIRILSL--DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLN 661
           +   +  I+I+SL    +D + ++S+Q VS     ++ +   +S+G          L L+
Sbjct: 599 IADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVR-DSSIG---------QLNLH 648

Query: 662 AGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL-----FSVVVGGR------------ 704
            GL+NGV  +  +  V G  +D + RFLGL+P  L      SV +               
Sbjct: 649 VGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLREISVSLNNEEEEEEEEDDDDE 708

Query: 705 --------------AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF-SSDQCVEGV 749
                         + ++C SS  W+ Y  +  + +  L  + +   + F ++D  + GV
Sbjct: 709 KEEEEINSSGAKWMSCVVCHSSSTWVSYTWKNVWTIRQLKDQNMLSCSKFVNADVAINGV 768

Query: 750 VSVAG 754
            S++ 
Sbjct: 769 CSISS 773



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 155/342 (45%), Gaps = 69/342 (20%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK--CENKLFPNTIVSIN 991
            +ELLH+T++     A+ +F+  LL  +G  + LY LGKK+LLR+   +  +    IVS++
Sbjct: 925  IELLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMH 984

Query: 992  TYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             +  +R+ VGDI ES     +    N    + DDSV R +T    +D  T+ GAD++GN 
Sbjct: 985  QWNYERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRYGNA 1044

Query: 1051 YFVRLPQD----VSDEIEEDPTGGKIKWE------QGKLNGAPN------KMEEIVQFHV 1094
            + +R P +    +S+    + + G IK+       Q KL   PN      K + +  F V
Sbjct: 1045 WTLRSPPECEKIMSNHDPSELSNGAIKYPLDVITLQQKL---PNTYDCKFKFQLLNHFFV 1101

Query: 1095 GDVVTSLQKA-SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE----------- 1142
             D++T      SL        IY  + G++G  +   S+ +V    ++E           
Sbjct: 1102 NDIITDFHILDSLSNSDRPGCIYMGLQGTVGCFIPLLSKGNVFMMGNIENIMAEADDTFY 1161

Query: 1143 ---------MHMRQEHP-------------------------PLCGRDHMAYRSAYFPVK 1168
                      +MR+E                            + GRDH  YRS Y PV+
Sbjct: 1162 LDYESRKKNNNMRKEDDEEESGSVVLQGRHGIEDEIICEGSCSILGRDHQEYRSYYAPVR 1221

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGE-ILKKLEEIR 1209
             VIDGDLCE F  LSL+ Q  +A  L     E I++ + E+R
Sbjct: 1222 KVIDGDLCENFLRLSLNEQEFLAKNLKSVQVEDIIQTINEVR 1263


>gi|195500686|ref|XP_002097479.1| GE26244 [Drosophila yakuba]
 gi|194183580|gb|EDW97191.1| GE26244 [Drosophila yakuba]
          Length = 1140

 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 292/1250 (23%), Positives = 516/1250 (41%), Gaps = 194/1250 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +++AR   +E  L+ PE    +  L    I G I
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG---LRPLKEININGTI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILE---YNPSKNVFDKIHQETFGKSGCRRIVP-- 116
              +  FR   S KD I + +    ++ILE    N +  V  K +       G    +P  
Sbjct: 62   AVMRHFRPPDSNKDLIFILTRRYNVMILEARMVNDAITVVTKANGNVSDSVG----IPSE 117

Query: 117  -GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
             G   A+DPK R  +IG C  Q L  ++  D  A    ++ L   +    VY +  +  G
Sbjct: 118  GGVMAAIDPKAR--VIGMCLYQGLFTIIPLDKDASELKATNLRMDE--LTVYDVEFLH-G 172

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANML 234
              NP    I        +D+ G+     + NL   E       +   W +  V+  A ML
Sbjct: 173  CLNPTVIVIH-------KDNDGRHVKSHEINLREKEF------MKIAWKQDNVETEATML 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            + VP       GV+V     ++Y +    +  AV P                 T RQ T+
Sbjct: 220  IPVPS---PIGGVIVIGRESIVYHDGS--NYHAVAP----------------LTFRQSTI 258

Query: 295  ----------FFFLLQTEYGDIFKVTLEHDNEH----VSELKIKYFDTIPVTASMCVLKS 340
                        +LL    G ++ + L          V ++K++    I +   +  L +
Sbjct: 259  NCYARVSSNGLRYLLGNMDGQLYMLFLGTSETSKGVTVKDIKVEQLGEISIPECITYLDN 318

Query: 341  GYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVE 400
            G+L+  +  G+  L +  +   D                             +V +E   
Sbjct: 319  GFLYIGARHGDSQLVRLNSEAIDGSY--------------------------VVPVENFT 352

Query: 401  SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
            +L PI+D+ + +L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W++
Sbjct: 353  NLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSL 411

Query: 461  KKNVNDE-FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518
            K  V++  ++  +V++F   T +L++ GE VEE    GF     +   S +  D ++QV 
Sbjct: 412  KVGVDESPYENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQVIQVT 471

Query: 519  PSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVE 576
               +R +    +  + EWR  G R+I  V  N  Q+V+A S  ++ Y  ++  G L E  
Sbjct: 472  SDSVRLVSSATKALVAEWRPTGDRSIGVVSCNTTQIVVA-SACDIFYIVIE-DGSLREQS 529

Query: 577  KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP--P 634
            +  +  +VACLDI  + E + +S  +AVG + +   ++   PD  ++ +  + +S    P
Sbjct: 530  RRTLEYEVACLDITPLDETQTKSDLVAVGLWTDISAVIMSLPD--LKTIYTEKLSGEIIP 587

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             S+L    +          H    +L   L +G ++  ++D  TGQL+D +   LG +P 
Sbjct: 588  RSILMTTFEGI--------H----YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPT 635

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             L +        +   S RP + Y    + + + ++ + + +  S ++    + +     
Sbjct: 636  TLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANK 695

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
            NA+ + TI+ + +    T +PL   PRR   Q   +   +       +    R  AK   
Sbjct: 696  NAVILGTIDEIQKLHIRT-VPLGEGPRRIAYQEASQTFAV---STLRIDVHGRGGAKPLR 751

Query: 815  FEAAGMGEN-------------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSC 861
              A+   +N             GN      E G + + ++ L  +Q  +    +  +VS 
Sbjct: 752  NSASTQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHHFVS- 810

Query: 862  IRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGY 921
                 P + ++    +L D+   + +               V T+  +   P+  +  G 
Sbjct: 811  -----PETISSLMSAKLGDDPNTYYV---------------VATSLVIPEEPEPKV--GR 848

Query: 922  IHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
            I I+ + E    L  + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N 
Sbjct: 849  IIIFHYHE--NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNI 906

Query: 982  LFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTM 1041
                  + +    D I VGD+  S    ++++ E      A D  P+W+ A   +D DT 
Sbjct: 907  QNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTF 966

Query: 1042 AGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSL 1101
             G++  GN++  +  +D +   +E+                   + E+ +FH+GD V   
Sbjct: 967  LGSETNGNLFVCQ--KDSAATTDEE----------------RQLLPELARFHLGDTVNVF 1008

Query: 1102 QKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPL 1152
            +  SLV         P  G  V+YGT  G++G +     +D  DF   L+  +++    +
Sbjct: 1009 RHGSLVMQNVGERTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLQERLKKIIKSV 1066

Query: 1153 CGRDHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
               +H  YR+        P +  IDGDL E F  LS +  R     L+ T
Sbjct: 1067 GKIEHTYYRNFQINNKVEPSEGFIDGDLIESFLDLSREKMRDSVQGLELT 1116


>gi|242089089|ref|XP_002440377.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
 gi|241945662|gb|EES18807.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
          Length = 1783

 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 282/1269 (22%), Positives = 537/1269 (42%), Gaps = 218/1269 (17%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y +T  +PT +  +  GNF+      +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3    VWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPG 117
            G I ++  FR     +D++ + ++  +  +L+++  K+ +  +   +   + G R    G
Sbjct: 60   GRIATIELFRPHNETQDFLFIATERYKFCVLQWDAEKSELITRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLH---GCV 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE-PVDNGANMLVT 236
             P    +  D  +     T + A + +            + V   WS+  VDNGA +L+ 
Sbjct: 174  KPTIVVLYQDNKDVRHVKTYEVALKDK------------DFVEGPWSQNNVDNGAGLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GV++  E  ++Y N  +   +A+  +++         I+ A          
Sbjct: 222  VPA---PLGGVIIIGEEQIVYCN-ANSTFKAIPIKQS---------IIRAYGRVDPDGSR 268

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + L H+ E V+ LKI+Y     + +S+  L +G ++  S FG+  L +
Sbjct: 269  YLLGDNTGILHLLVLTHERERVTGLKIEYLGETSIASSISYLDNGVVYVGSRFGDSQLVK 328

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
               + AD     +S + +E                    +E+  +L PI+D  + +L  +
Sbjct: 329  LN-LQAD-----ASGSFVEI-------------------LERYVNLGPIVDFCVVDLDRQ 363

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               Q+ T  G     SLR++R G+ ++E A  +L G+   +W++K + ND +D Y+VVSF
Sbjct: 364  GQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGI-KGLWSLKSSFNDPYDMYLVVSF 422

Query: 477  NNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--IN 532
             + T  L +++ + +EE    GF   T +L      +D L+QV  + +R +    R  ++
Sbjct: 423  ISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNATNDLLIQVTANSVRLVSCTSRELVD 482

Query: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
            +W  P   ++    +N  QV++A  GG L+Y E+    +L+EV+  ++  +++CLD+  +
Sbjct: 483  QWNAPAGFSVNVASANASQVLLATGGGHLVYLEI-RDSKLVEVKHAQLEHEISCLDLNPI 541

Query: 593  PEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGE 649
             E  + S   AVG + D ++RI SL PD  ++++  +++     P S+L   ++      
Sbjct: 542  GENPQYSSLAAVGMWTDISVRIFSL-PD--LELIRKENLGGEIVPRSVLLCTLEGVS--- 595

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G LF  +++  TG+L+D +   LG +P  L +    G   +  
Sbjct: 596  ---------YLLCALGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFA 646

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + L + ++ + + +   F++    + +       L + TI+ + +  
Sbjct: 647  SSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLH 706

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
              T +PL    RR   Q + K +                                     
Sbjct: 707  IRT-IPLNEQARRICHQEQSKTLAFC---------------------------------- 731

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
                              + Y ++  +     IR+LD ++  + C+  L   E   SI +
Sbjct: 732  -----------------SFKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYEFGCSIIS 774

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
             +F D ++     VGTA  +   P+ N    G I ++  VE+G SL+L+ + + +G   +
Sbjct: 775  CSFAD-DNNVYYCVGTAYVI---PEENEPTKGRILVFA-VEDG-SLQLIVEKETKGAVYS 828

Query: 949  LCQFQGRLLAGIGPVLRLYDL-----GKKRLLRKCENKLFPNTIVSI--NTYRDRIYVGD 1001
            L  F G+LLA I   ++LY       G   L  +C +      I+++   T  D I VGD
Sbjct: 829  LNAFNGKLLAAINQKIQLYKWMSREDGSHELQSECGHH---GHILALYTQTRGDFIVVGD 885

Query: 1002 IQESFHFCKYRRD-----------------------ENQLYIFADDSVPRWLTAAHHIDF 1038
            + +S     Y+                         E+ +   A D    W+TA   +D 
Sbjct: 886  LMKSISLLVYKVVPLTVCLTHIVLSVIFFVSLFVVLESAIEERARDYNANWMTAVEMLDD 945

Query: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
            +   GA+   N++ VR   D + + E                    ++E + ++H+G+ V
Sbjct: 946  EVYVGAENGYNLFTVRKNSDAATDDER------------------ARLEVVGEYHLGEFV 987

Query: 1099 TSLQKASLVP-------GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPP 1151
               +  SLV        G   +VI+GT+ G +G ++A    D   F   L+  + +    
Sbjct: 988  NRFRHGSLVMRLPDSEIGQIPTVIFGTINGVIG-IIASLPHDQYVFLEKLQSTLVKYIKG 1046

Query: 1152 LCGRDHMAYRSAY-----FPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG----EIL 1202
            +    H  +RS +        ++ +DGDL E F    LDL R   +E+ +  G    E+ 
Sbjct: 1047 VGNLSHEQWRSFHNDKKTAEARNFLDGDLIESF----LDLSRSKMEEVSKAMGVPVEELS 1102

Query: 1203 KKLEEIRNK 1211
            K+++ I +K
Sbjct: 1103 KRVDTILDK 1111


>gi|195108657|ref|XP_001998909.1| GI23368 [Drosophila mojavensis]
 gi|193915503|gb|EDW14370.1| GI23368 [Drosophila mojavensis]
          Length = 1140

 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 297/1252 (23%), Positives = 518/1252 (41%), Gaps = 198/1252 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +++AR   +E  L+ PE    +  L    I G I
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG---LRPLKEININGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIV-----P 116
              +  FR   S KD + + +    ++ILE   ++ V D I   T         V      
Sbjct: 62   TVMRHFRPPDSNKDLLFILTRRFNVMILE---ARMVGDNITVVTKANGNVSDSVGILSEG 118

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            G   A+DPK R  +IG C  Q L  ++  D  A    ++ L   +   IVY +  +  G 
Sbjct: 119  GFIAAIDPKAR--VIGMCLYQGLFTIIPLDKDASELKATSLRMDE--LIVYDVEFLH-GC 173

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLV 235
             NP    I        +D+ G+     + NL   E       +   W +  V+  A ML+
Sbjct: 174  LNPTVIVIH-------KDNDGRHVKCHEINLRDKEF------MKLAWKQDNVETEATMLI 220

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL- 294
             VP       GV+V     ++Y +    +  AV P                 T RQ T+ 
Sbjct: 221  PVPS---PIGGVIVIGRESIVYHDGS--NYHAVAP----------------LTFRQSTIN 259

Query: 295  ---------FFFLLQTEYGDIFKVTLEHDNE----HVSELKIKYFDTIPVTASMCVLKSG 341
                       +LL    G ++ + L  +       V ++K++    I +   +  L +G
Sbjct: 260  CYARVDSKGLRYLLGNMDGQLYMLFLGINETGKVPTVKDIKVEQLGEISIPECITYLDNG 319

Query: 342  YLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVES 401
            +L+  S  G+  L +  +                          +P     ++ +E   +
Sbjct: 320  FLYIGSRHGDSQLVRLSS--------------------------EPIDGSYVIPVENFTN 353

Query: 402  LMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK 461
            L PI+D+ + +L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W++K
Sbjct: 354  LAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSLK 412

Query: 462  KNVNDE-FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP 519
              ++D  ++  +V++F   T +L++ GE VEE    GF     S   + +  D L+QV  
Sbjct: 413  VGIDDSVYENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQSFLCANVEYDQLIQVTA 472

Query: 520  SGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEK 577
              +R ++   +  + EW+  G R+I  V  N  Q+V A S  E+ Y  ++  G L+E  +
Sbjct: 473  ESVRLVKSSTKALVGEWKPEGDRSIGVVSCNSTQIV-AASAREIFYIAIE-DGSLVEKCR 530

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--P 634
              ++ +VACLD+  + E + +S  +AVG + D +  ILSL PD  ++ +  + +S    P
Sbjct: 531  KTLAYEVACLDVTPLDEKQNKSELVAVGLWTDISAVILSL-PD--LETIYTEKLSGEIIP 587

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             S+L          ED        +L   L +G ++  ++D  TG L+D +   LG +P 
Sbjct: 588  RSILMTTF------EDIH------YLLCALGDGSMYYFILDRTTGFLTDKKKVTLGTQPT 635

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             L +        +   S RP + Y    + + + ++ + + +  S ++    + +     
Sbjct: 636  TLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATK 695

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
            N++ + TI+ + +    T +PL   PRR   Q   +   +       +    R  AK   
Sbjct: 696  NSVILGTIDEIQKLHIRT-VPLGEGPRRIAYQEASQTFAV---STLRIDVHGRGGAKPLR 751

Query: 815  FEAAGMGEN-------------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSC 861
              A+   +N             GN      E G + + ++ L  +Q  +    + ++V  
Sbjct: 752  NSASTQAQNITCSSNMLPKPGGGNSTAANAEVGQEIDVHNLLIIDQNTFEVLHAHQFVP- 810

Query: 862  IRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGY 921
                 P + +     +L D+   + +                  A  L F  +     G 
Sbjct: 811  -----PETISALMSAKLGDDPNTYYV-----------------VATSLVFPDEPEPKVGR 848

Query: 922  IHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
            I I+ + E    L  + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N 
Sbjct: 849  IIIFHYHE--NKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECN- 905

Query: 982  LFPNTIVS--INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD 1039
               N I +  +    D I VGD+  S    ++++ E      A D  P+W+ A   +D D
Sbjct: 906  -IQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDD 964

Query: 1040 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVT 1099
            T  G +   N++  +  +D +   +E+                   + E+ +FH+GD + 
Sbjct: 965  TFLGCETHDNLFVCQ--KDSAATTDEE----------------RQLLPELARFHLGDTIN 1006

Query: 1100 SLQKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP 1150
              +  SLV         P  G  V+YGT  G++G +     +D  DF   LE  +++   
Sbjct: 1007 VFRHGSLVMQNVGERTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIK 1064

Query: 1151 PLCGRDHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
             +   DH  YR+        P +  IDGDL E F  LS D   +    L+ T
Sbjct: 1065 SVGKIDHTYYRNYQINTKVEPSEGFIDGDLIESFLDLSRDKMHEAVTGLELT 1116


>gi|195449948|ref|XP_002072297.1| GK22405 [Drosophila willistoni]
 gi|194168382|gb|EDW83283.1| GK22405 [Drosophila willistoni]
          Length = 1140

 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 292/1250 (23%), Positives = 521/1250 (41%), Gaps = 194/1250 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +++AR   +E  ++ PE    +  L    I G I
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIGIVTPEG---LRPLKEININGTI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIV-----P 116
              +  FR   S KD + + +    ++ILE   ++ V D I   T         V      
Sbjct: 62   AVMKHFRPPDSNKDLLFILTRRYNVMILE---ARMVGDTITVITKANGNVSDSVGIPSEG 118

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            G   A+DPK R  +IG C  Q L  ++  +  A    ++ L   +   +VY +  +  G 
Sbjct: 119  GVIAAIDPKAR--VIGMCLYQGLFTIIPMEKDASELKATNLRMDE--LMVYDVEFLH-GC 173

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLV 235
             NP    I        +D+ G+     + NL   E       +   W +  V+  A ML+
Sbjct: 174  LNPTVIVIH-------KDNDGRHVKSHEINLRDKEF------MKIAWKQDNVETEATMLI 220

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL- 294
             VP       GV+V     ++Y +    +  AV P                 T RQ T+ 
Sbjct: 221  PVPS---PIGGVIVIGRESIVYHDGS--NYHAVAP----------------LTFRQSTIN 259

Query: 295  ---------FFFLLQTEYGDIFKVTLEHDNEH----VSELKIKYFDTIPVTASMCVLKSG 341
                       +LL   +G ++ + L          V ++K++    I +   +  L +G
Sbjct: 260  CYARVDSKGLRYLLGNMHGQLYMLFLGTSESSKGITVKDIKVEQLGEISIPECITYLDNG 319

Query: 342  YLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVES 401
            +L+  +  G+  L +  +                  E  +  +  P        +E   +
Sbjct: 320  FLYIGARHGDSQLVRLSS------------------EAIEGSYVIP--------VENFTN 353

Query: 402  LMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK 461
            L PI+D+ + +L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W++K
Sbjct: 354  LAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSLK 412

Query: 462  KNVNDE-FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP 519
               +D  ++  +V++F   T +L++ GE VEE    GF     +   + +  D L+QV  
Sbjct: 413  VGTDDSPYENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQLIQVTS 472

Query: 520  SGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEK 577
              +R ++   +  + EWR  G R+I  V  N  Q+V+A S  ++ Y  ++  G L E  +
Sbjct: 473  DSVRLVKSSSKSLVAEWRPEGDRSIGVVSCNGTQIVVA-SARDIFYIVIE-DGNLQEKCR 530

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPP 634
              ++ +VACLDI  + E + +S  +AVG + D +  +LSL   D +  + LS + +   P
Sbjct: 531  KTLAYEVACLDITPLDEKQNKSELVAVGLWTDISAVMLSLPSLDTIYTEKLSGEII---P 587

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             S+L    +          H    +L   L +G ++  ++D +TGQL+D +   LG +P 
Sbjct: 588  RSILMTTFEGI--------H----YLLCALGDGSMYYFIMDPITGQLTDKKKVTLGTQPT 635

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             L +        +   S RP + Y    + + + ++ + + +  S ++    + +     
Sbjct: 636  TLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATK 695

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
            N++ + TI+ + +    T +PL   PRR   Q   +   +       +    R   K   
Sbjct: 696  NSVILGTIDEIQKLHIRT-VPLGEGPRRIAYQEASQTFAV---STLRIDVHGRGGPKPLR 751

Query: 815  FEAAGMGEN-------------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSC 861
              A+   +N             GN      E G + + ++ L  +Q  +    + ++VS 
Sbjct: 752  SSASTRAQNITCSSNILPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQFVS- 810

Query: 862  IRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGY 921
                 P + +     +L D+   + +               V T+  +   P+  +  G 
Sbjct: 811  -----PETISALMSAKLGDDPNTYYV---------------VATSLVIPDEPEPKV--GR 848

Query: 922  IHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
            I I+ +      L  + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N 
Sbjct: 849  IIIFHY--HDNKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECNI 906

Query: 982  LFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTM 1041
                  + +    D I VGD+  S    ++++ E      A D  P+W+ A   +D DT 
Sbjct: 907  QNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTF 966

Query: 1042 AGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSL 1101
             G++  GN++  +  +D +   +E+                   + E+ +FH+GD V   
Sbjct: 967  LGSETNGNLFVCQ--KDSAATTDEE----------------RQLLPELARFHLGDTVNVF 1008

Query: 1102 QKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPL 1152
            +  SLV         P  G  V+YGT  G++G +     +D  DF   LE  +++    +
Sbjct: 1009 RHGSLVMQNVGERTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKSV 1066

Query: 1153 CGRDHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
               +H  YR+        P +  IDGDL E F  LS D  R+    L+ T
Sbjct: 1067 GKIEHTYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMREAVLGLELT 1116


>gi|357132340|ref|XP_003567788.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
            distachyon]
          Length = 1090

 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 281/1241 (22%), Positives = 530/1241 (42%), Gaps = 196/1241 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT +  +  GNF+      ++VA+   +E  LL P+    I+ L+   I+G I
Sbjct: 6    YVVTAHKPTSVSHSCVGNFTSNTQLNLIVAKCTRIEIHLLTPQG---IQPLLDVPIYGRI 62

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP---GQ 118
             ++  FR     +D++ + ++  +  +L+++  K+   ++   + G    R   P   GQ
Sbjct: 63   ATIELFRPPTEAQDFLFIATERYKFCVLQWDAEKS---ELITRSVGDVSDRIGRPTDNGQ 119

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DP  R  +IG      L  V+  D   +L  +  +   +   +         G   
Sbjct: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCLR 174

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTV 237
            P    +  D  +A    T + A + +            + V   WS+  +DNGA +L+ V
Sbjct: 175  PTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGAGLLIPV 222

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
            P       GV++  E  ++Y N  +   +A+  +++         I+ A          +
Sbjct: 223  PAP---LGGVIIIGEETIVYCN-ANSTFKAIPIKQS---------IIRAYGRVDPDGSRY 269

Query: 298  LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            LL    G +  + L  + E V+ LKI++     V +S+  L +G ++  S FG+  L + 
Sbjct: 270  LLGDNTGILHLLVLTQERERVTGLKIEHLGETSVASSISYLDNGVVYVGSRFGDSQLVKL 329

Query: 358  QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE 417
              + AD     ++ + +E                    +E+  +L PI+D  + +L  + 
Sbjct: 330  N-LQAD-----ATGSFVEV-------------------LERYVNLGPIVDFCVVDLDRQG 364

Query: 418  APQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFN 477
              Q+ T  G     S+R++R G+ ++E A  +L G+   +W++K + ND +D ++VVSF 
Sbjct: 365  QGQVVTCSGAFKDGSIRVVRNGIGINEQASVELQGI-KGLWSLKSSFNDPYDTFLVVSFI 423

Query: 478  NAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INE 533
            + T  L +++ + +EE    GF     +L       D L+QV  + +R +    R  ++ 
Sbjct: 424  SETRFLAMNMEDELEETEIEGFDAQIQTLFCQNAISDLLIQVTANSVRLVSCASRELVDH 483

Query: 534  WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVP 593
            W  P   ++    +N  QV++A  GG L+Y E+    +L+EV+  ++  +++C+D+  + 
Sbjct: 484  WNAPDGFSVNVASANASQVLLATGGGHLVYLEI-RDAKLVEVKHAQLEHEISCVDLNPIG 542

Query: 594  EGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGED 650
            E  + S   A+G + D ++ +LSL PD  ++++  +++     P S+L   ++       
Sbjct: 543  ENPQYSSLAAIGMWTDISVSLLSL-PD--LELIRKENLGGEIVPRSVLLCTLEGVS---- 595

Query: 651  GADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCL 710
                    +L   L +G LF  ++++ TG+L+D +   LG +P  L +    G   +   
Sbjct: 596  --------YLLCALGDGHLFSFLLNVSTGELTDKKKVSLGTQPISLRTFSSKGTTHVFAS 647

Query: 711  SSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFN 770
            S RP + Y    + L + ++ + + +   F++    + +       L + TI+ + +  +
Sbjct: 648  SDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDI-QKLH 706

Query: 771  ETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQ 830
               +PL    RR   Q + + +          + EE EA                     
Sbjct: 707  IRTIPLNEQARRICHQEQSRTLAFCSFKYNPNSMEESEA--------------------- 745

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTV 890
                                           IR+LD ++        L   E   S+ + 
Sbjct: 746  -----------------------------HFIRLLDHQTFEFLSTHPLDQYECGCSMISC 776

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLAL 949
            +F D ++     VGTA  L   P+ N    G I ++  VE+G+ L+L+ + + +G   +L
Sbjct: 777  SFSD-DNNFYYCVGTAYVL---PEENEPTKGRILVFA-VEDGR-LQLIVEKETKGAVYSL 830

Query: 950  CQFQGRLLAGIGPVLRLYDL-----GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
              F G+LLA I   ++LY       G   L  +C +      + +  T  D I VGD+ +
Sbjct: 831  NAFNGKLLAAINQKIQLYKWMTREDGSHELQSECGHHGHILALFT-QTRGDFIVVGDLMK 889

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD-VSDEI 1063
            S     Y+ +E+ +   A D    W+TA   ID D   GA+   N++ VR   D  +DE 
Sbjct: 890  SISLLVYKHEESAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTVRKNSDAATDE- 948

Query: 1064 EEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVIY 1116
                       E+G+L       E + ++H+G+ V   +  SLV        G   +VI+
Sbjct: 949  -----------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDTEMGQIPTVIF 990

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY-----FPVKDVI 1171
            GT+ G +G ++A    D   F   L+  + +    +    H  +RS +        ++ +
Sbjct: 991  GTINGVIG-IIASLPHDQYVFLEKLQSILGKFIKGVGSLSHDQWRSFHNEKKTAEARNFL 1049

Query: 1172 DGDLCEQFPTLSLDLQRKIADELDRTPG----EILKKLEEI 1208
            DGDL E F    LDL R   +E+ +  G     + K++EE+
Sbjct: 1050 DGDLIESF----LDLNRSKMEEVSKGMGVSVENLSKRVEEL 1086


>gi|254585271|ref|XP_002498203.1| ZYRO0G04730p [Zygosaccharomyces rouxii]
 gi|238941097|emb|CAR29270.1| ZYRO0G04730p [Zygosaccharomyces rouxii]
          Length = 1302

 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 199/749 (26%), Positives = 345/749 (46%), Gaps = 114/749 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF------SGTKTPEIVVARGKVLEL---------LRPEN 45
           + L+ LTLQ+ T  + +  G+F      S  +     V R + L+L         L   +
Sbjct: 8   LILFHLTLQRQTNYVHSCIGHFIDVNDDSSQEVTGSKVNRKRHLQLCISTQTHLELYDVS 67

Query: 46  SGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP----SKNVFDKI 101
            G + +L    +F  I ++    L  S   ++ + SDSG + I  +       K V   +
Sbjct: 68  EGSLRSLAVVPLFATITAMETLNLENSPSSFLALTSDSGNLTISRFASIEPQGKIVLQAL 127

Query: 102 HQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHK 161
             +   +SG RR+ P  +L VD  GR + + A E+ KL +V N+     ++I  PLEA  
Sbjct: 128 INQPLTRSGLRRLSPISHLQVDLHGRCLFLSAIERNKLCFVANQIGQDGISIQDPLEALV 187

Query: 162 SHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR 221
            +T+       D  +DNP FA++EL               +   +L FY LDLGLNH+ +
Sbjct: 188 PNTLTLDTAVCDVRYDNPCFASLEL--------------QQGNHHLVFYVLDLGLNHIVK 233

Query: 222 KWSEPVDNGANMLVTVP-----------GGGDGPSG--------VLVCAENFVIYKN-QG 261
           + S  +D  AN L+ +P              +   G        VLV  E+FV+ K+  G
Sbjct: 234 RASYKIDETANFLMGLPDLSKYRISTYMDSNEHHHGDYDEINPFVLVGFEDFVMIKDLHG 293

Query: 262 HPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE- 320
             +++  IPRR D+       I+  A    K  FF LLQ+ +GD+FK+ +E + E  +  
Sbjct: 294 FYNIKVPIPRRKDVSMP--TTIICFAIQTLKNNFFVLLQSNHGDLFKLKIEPNKEDSNRP 351

Query: 321 -LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEG 379
              I YFDTIP    + + K+G+LFA  EF ++ L+QF+++G D  +E +          
Sbjct: 352 VAFISYFDTIPQATDLHIFKNGFLFANVEFYDNRLFQFESLGDDTPIEGT---------- 401

Query: 380 FQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
           F+P       L+NL  +E  ++L P++  ++       +    TL       + R +  G
Sbjct: 402 FEP----SSTLRNLSLVETQKNLNPLISSQVT------STTPLTLAANSMNKT-RFMVNG 450

Query: 440 LAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL-----SIGETVEEVSD 494
           +       S +      +W++K   +D +   + ++ ++ T++L     ++GE   E  +
Sbjct: 451 VDFDVHVSSGVNVDARELWSIKF-PSDNYHRLLFLASHDLTMILETEAGAMGELAGEQHE 509

Query: 495 SGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI------REDGRINEWRTPGKRTIVKVGSN 548
                +  ++ V  +G  S++QV  + +R +      ++  +  EW  P    +V    N
Sbjct: 510 FK-TKSDRTVFVGSMGSKSVVQVCVNELRQVVFNADSKKYEKKLEWFPPAGIRVVAADCN 568

Query: 549 RLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD----IASVPEGRKRSRFLAV 604
             Q+ + LS GE+ YFE+D     L    HE+   V   +    +A +PE   RS +LAV
Sbjct: 569 YSQLAVGLSNGEICYFEIDTES--LSDSLHELQNRVEIDEQIKGLAMIPE--PRSDYLAV 624

Query: 605 GSYDNTIRILSL---DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLN 661
           G+ +  +++LSL   D D+ ++++S+Q++ +P   L     +  V             L+
Sbjct: 625 GTKEANLKVLSLKKNDMDNFLEVVSLQALMAPVSDLKITRTERDVE------------LH 672

Query: 662 AGLQNGVLFRTVVDMVTGQLSDSRSRFLG 690
            GL NG+  R+ ++   GQL D R++FLG
Sbjct: 673 IGLINGLYSRSKLNRYDGQLYDVRNKFLG 701



 Score =  119 bits (299), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 149/342 (43%), Gaps = 66/342 (19%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI--- 990
            ++LLHKT  E    A+  F+ +LL  +   L LY LGKK+LL++       +T  SI   
Sbjct: 965  MKLLHKTPTEDKVHAMVGFRDKLLIPVFGSLILYGLGKKQLLKRS----ISSTTASITKI 1020

Query: 991  ----NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADK 1046
                N    RI VGD +ES    ++    N     ADD V R +TA   ID  T+ G DK
Sbjct: 1021 SSLANWKNQRIAVGDNRESATILQFDSTNNIFVPIADDVVKRHVTALTFIDQSTVIGGDK 1080

Query: 1047 FGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGK--LNGAPN------KMEEIVQFHVGDVV 1098
            FGNI+ +RL ++    I  +      + +Q     N APN      K+  I  F+V D+ 
Sbjct: 1081 FGNIWTLRLSREQESLIRSNFPHSLDRLQQYADLKNKAPNIMACPLKLSLINHFYVNDIP 1140

Query: 1099 TSLQKASLVPGGGESVI-YGTVMGSLGAMLAFSSRDDVDFFSHLE---------MHMRQE 1148
            T    A  V      +I Y  + G++G+++   ++ +V+    LE          ++ QE
Sbjct: 1141 TGFYLAEAVQVSDRPIILYCGLQGTIGSLVPLLTKSEVNSLRSLENVMSDADDIFYLEQE 1200

Query: 1149 HP------------------------------------PLCGRDHMAYRSAYFPVKDVID 1172
            +                                      + GRD   YRS Y PV++VID
Sbjct: 1201 NQNGSSTDQPVDEDGLDKDVARPLGSSSNAVRIPEGAYSIVGRDSFKYRSYYAPVRNVID 1260

Query: 1173 GDLCEQFPTLSLDLQRKIADELD-RTPGEILKKLEEIRNKIV 1213
            GDLCE F  LSL  Q K+  E     P  + K+L +IR   +
Sbjct: 1261 GDLCETFLNLSLSEQTKLCKETSGSNPEGVCKQLNDIRTNYI 1302


>gi|195037449|ref|XP_001990173.1| GH18378 [Drosophila grimshawi]
 gi|193894369|gb|EDV93235.1| GH18378 [Drosophila grimshawi]
          Length = 1140

 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 291/1240 (23%), Positives = 515/1240 (41%), Gaps = 170/1240 (13%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT ++A + GNF+      +V+AR   +E  L+ PE    +  L    I G I
Sbjct: 5    YVVTAQKPTAVVACLTGNFTSETDLNLVIARNNQIEIDLVTPEG---LRPLKEININGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP--GQY 119
              +  FR   ++KD + + +    ++ILE     +    + +     S    I+   G  
Sbjct: 62   TVMRHFRPPDTKKDLLFILTRRFNVMILEARMVGDTITVVTKANGNVSDSVGILSEGGFI 121

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             A+DPK R  +IG C  Q L  ++  D  A    ++ L   +    VY +  +  G  NP
Sbjct: 122  AAIDPKAR--VIGMCLYQGLFTIIPLDKDASELKATNLRMDE--LTVYDVEFLH-GCLNP 176

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTVP 238
                I        +D+ G+     + NL   E       +   W +  V+  A ML+ VP
Sbjct: 177  TVIVIH-------RDNDGRHVKSHEINLRDKEF------MKIAWKQDNVETEATMLIPVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
                   GV+V     ++Y +    +  AV P        R   I   A   +K L + L
Sbjct: 224  S---PICGVIVIGRESIVYHDGS--NYHAVAPLTF-----RQSTINCYARIDEKGLRYLL 273

Query: 299  LQTE---YGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
               +   Y      T       V ++K++    I +   +  L +G+L+  S  G+  L 
Sbjct: 274  GNMDGQLYMLFLGTTETSKGITVKDIKVEQLGEISIPECITYLDNGFLYIGSRHGDSQLV 333

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            +  +                  E     F  P        +E   +L PI+D+ + +L  
Sbjct: 334  RLSS------------------EAIDGTFVIP--------VENFTNLAPILDIAVVDLDR 367

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND-EFDAYIVV 474
            +   QI T  G     SLRI+R G+ + E A   LPG+   +W++K  +++  ++  +V+
Sbjct: 368  QGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGI-KGMWSLKVGIDESSYENTLVL 426

Query: 475  SFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--I 531
            +F   T +L++ GE VEE    GF     S   + +  D L+QV    +R ++   +  +
Sbjct: 427  AFVGHTRILTLSGEEVEETDIPGFASDLQSFLCANVDYDQLIQVTAESVRLVKSATKALV 486

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIAS 591
             EW+  G R+I  V  N  Q+V A S  E+ Y  ++  G L+E  +  +  +VACLD+  
Sbjct: 487  GEWKPEGDRSIGVVSCNTTQIV-AASAREIFYISIE-DGSLVEKCRKILPYEVACLDVTP 544

Query: 592  VPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGG 648
            + E + +S  +AVG + D +  ILSL PD  ++ +  + +S    P S+L    +     
Sbjct: 545  LDEKQNKSDLVAVGLWTDISAVILSL-PD--LETIYTEKLSGEIIPRSILMTTFEDI--- 598

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                 H    +L   L +G ++  ++D  TGQL++ +   LG +P  L +        + 
Sbjct: 599  -----H----YLLCALGDGSMYYFILDKTTGQLTEKKKVTLGTQPTTLRTFRSFATTNVF 649

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
              S RP + Y    + + + ++ + + +  S ++    + +     N++ + TI+ + + 
Sbjct: 650  ACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSVILGTIDEI-QK 708

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGEN----- 823
             +   +PL   PRR   Q   +   +       +    R  AK     A+   +N     
Sbjct: 709  LHIRTVPLGEGPRRIAYQEASQTFAV---STLRIDVHGRGGAKPLRNSASTQAQNITCGS 765

Query: 824  --------GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCL 875
                    GN      E G + + ++ L  +Q  +    + ++V       P + +T   
Sbjct: 766  NILPKPGGGNSTAANAEVGQEIDVHNLLIIDQNTFEVLHAHQFVP------PETISTLMS 819

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
             +L D+   + +                  A  L +  +     G I I+ +      L 
Sbjct: 820  AKLGDDPNTYYV-----------------VATSLVYPEEPEPKVGRIIIFHY--NDNKLT 860

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVS--INTY 993
             + +T+V+G   AL +F G++LAGIG  +RLY+   ++ LR   N    N I +  +   
Sbjct: 861  QVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTNEKELRMECN--IQNMIAALFLKAK 918

Query: 994  RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
             D I VGD+  S    ++++ E      A D  P+W+ A   +D DT  G +   N++  
Sbjct: 919  GDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGCETHDNLFVC 978

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV------ 1107
            +  +D +   +E+                   + E+ +FH+GD +   +  SLV      
Sbjct: 979  Q--KDSAATTDEE----------------RQLLPELARFHLGDTINVFRHGSLVMQNVGE 1020

Query: 1108 ---PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY 1164
               P  G  V+YGT  G++G +     +D  DF   LE  +++    +   DH  YR+  
Sbjct: 1021 RTTPING-CVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKSVGKIDHTYYRNYQ 1078

Query: 1165 F-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
                  P +  IDGDL E F  L+ +  R+    L+ T G
Sbjct: 1079 INTKVEPSEGFIDGDLIESFLDLNREKMREAVLGLELTMG 1118


>gi|242010743|ref|XP_002426118.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
 gi|212510165|gb|EEB13380.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
          Length = 1148

 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 287/1241 (23%), Positives = 525/1241 (42%), Gaps = 155/1241 (12%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT + A + GNF+      +++A+   LE  L+ PE    +  L    ++  I
Sbjct: 5    YVVTAQKPTAVTACVTGNFTSPSDLNLILAKNTRLEIHLVTPEG---LRPLKEIGLYDRI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              +  FR     KD + + +     +ILE      +  +  K H     + G ++   G 
Sbjct: 62   SVVKFFRPPHEHKDLLFIVTTRYNAMILECIGDGENIEIKTKAHGNVADRIG-KQSETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DP+ R + +   +    +  L +D +     S  +E  +   + +       G  N
Sbjct: 121  IAVIDPEARVIGLRLYDGLLKIIPLGKDNSELKASSIRMEEVEVQDLNFL-----HGCQN 175

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTV 237
            P    I        QD  G+     + +L   E       V   W +  V+  A++++ V
Sbjct: 176  PTIILIH-------QDINGRHVKTHEISLRDKEF------VKMPWKQDNVEPDASIVIPV 222

Query: 238  PGGGDGPSGVLVCAENFVIYKN-QGHPDVRAVIPRRADLPAERGV-------LIVSAATH 289
            P   +   G ++  +  ++Y N  G+  V   +  ++ +     V       L+   A H
Sbjct: 223  P---EPLCGAIIIGQESILYHNGAGYVAVAPPVINQSTITCYTQVDSNGSRYLLGDMAGH 279

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
                LF  LL+TE        ++ +      LK++    I +  ++  L +G LF  S  
Sbjct: 280  ----LFMLLLETEEKIDGTPCVKENG-----LKVELLGEISIPEAITYLDNGVLFIGSRC 330

Query: 350  GNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR 409
            G+  L +   +   PD      T+ME                         +L PI+DM 
Sbjct: 331  GDSQLVK---LNTSPDENGYYVTIMEA----------------------FTNLAPILDMV 365

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
            + +L  +   Q+ T  G     SLRI+R G+ + E A   L G+   +W ++ +++  +D
Sbjct: 366  VVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIQEHATIDLLGI-KGMWALRASLDSVYD 424

Query: 470  AYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
              IV++F   T +L++ GE VEE    GFL    S     + +++++Q+ P+  R I  +
Sbjct: 425  NTIVLAFVGQTRILTLNGEEVEETEIPGFLSDQQSFYCGNVENNNMIQLTPTCARLISVE 484

Query: 529  GR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVAC 586
             +  ++EWR P  +TI  V  N +Q + A +G +L Y E+ +  +L++     +  +VAC
Sbjct: 485  TKQLVSEWRPPAGKTISVVACNTVQAICA-AGSDLYYLEI-LKNELVQKGNTTLEYEVAC 542

Query: 587  LDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQ 643
            LDI  + EG K +  +AVG + D + RIL L PD  ++ L+ + +     P S+L    +
Sbjct: 543  LDITPLSEGGKTADIIAVGLWTDISARILKL-PD--LEELNREYLGGEIIPRSILMTCFE 599

Query: 644  ASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG 703
                           +L   L +G +F   ++   G LSD +   LG +P  L +     
Sbjct: 600  NIN------------YLLCALGDGSMFYFSLNNQNGILSDKKKVTLGTQPTVLRTFRSLS 647

Query: 704  RAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIE 763
               +   S RP + Y    + + + ++ + + +  S +S+   + +     + + + TI+
Sbjct: 648  TTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNSEAYPDSLALATDSTVTIGTID 707

Query: 764  RLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAA 818
             + +  +   +PL  +PRR   Q   +   +I        +  L   ++ A+ +    ++
Sbjct: 708  EI-QKLHIRTVPLGESPRRIAYQETTQTFGVITMRMDVHQRSGLIPVKQSASTQAQSISS 766

Query: 819  GMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLEL 878
                 G  N+          K  P +     + +   +  V  + V+D  +       + 
Sbjct: 767  SSNIGGAHNL----------KSGPAASIN-SFAEFGQEVEVHNLLVIDQHTFEVLHAHQF 815

Query: 879  QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
              +E A S+ +    D +  T   VGTA  +    +     G I I++F +EGK  ++  
Sbjct: 816  MQSEYALSLISTKLGD-DPNTYYIVGTA--MVNPDESESKQGRILIFQF-QEGKLYQVAE 871

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRI 997
            K +++G   +L +F G+LLA I   +RL++   ++ LR  E   F N I + + T  D I
Sbjct: 872  K-EIKGAAYSLVEFNGKLLASINSTVRLFEWTAEQELR-LECSHFNNIISLYLKTKGDFI 929

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             VGD+  S    +Y+  E      A D  P W+TA   ID DT  GA+   N++  +  +
Sbjct: 930  LVGDLIRSMTLLQYKTMEGCFEEMARDHNPNWMTAVEIIDDDTFLGAENSFNLFVCQ--K 987

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------P 1108
            D +   +E+                  +M  +  FH+GD+V   +  SLV         P
Sbjct: 988  DSAAATDEE----------------RQQMHAVGMFHLGDMVNVFRHGSLVMQNVGETSTP 1031

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK 1168
              G  +++GTV G++G +   S+ +  +F   LE  + +    +    H  +RS    +K
Sbjct: 1032 TTG-CILFGTVSGAIGLVTQISA-NFYNFLHELECKLTEVIKSVGKIKHSFWRSFTTEIK 1089

Query: 1169 D-----VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
                   IDGDL E F  LS +  +++A  L    G  +K+
Sbjct: 1090 TEPCDGFIDGDLIESFLDLSHEKMKEVAAGLQIDNGSGMKQ 1130


>gi|432851195|ref|XP_004066902.1| PREDICTED: DNA damage-binding protein 1-like [Oryzias latipes]
          Length = 1140

 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 292/1239 (23%), Positives = 499/1239 (40%), Gaps = 173/1239 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT + A I G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGRI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  + +  D I       Q+  G+     I+
Sbjct: 62   SVMELFRPKGESKDLLFILTSKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTI-VYSICGIDC 174
                  VDP+ R  MIG      L  V+  D   R   +  +   +   I V+ + G   
Sbjct: 122  G----IVDPECR--MIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQA 175

Query: 175  GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANM 233
                P    I        QD  G+     + +L   E + G       W  E V+  A+M
Sbjct: 176  ----PTVCFIY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASM 218

Query: 234  LVTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIV 284
            ++ VP   +   G ++  +  + Y N         P ++    V   R D    R +L  
Sbjct: 219  VIPVP---EPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLL-- 273

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
                  +  LF  LL+ E        L      + +L ++      +   +  L +G +F
Sbjct: 274  ---GDMEGRLFMLLLEKE-------ELMDGTVALKDLHVELLGETSIAECLTYLDNGVVF 323

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
              S  G+  L +   +  D + + S  T+MET                        +L P
Sbjct: 324  VGSRLGDSQLVK---LNVDSNEQGSYVTVMET----------------------FTNLGP 358

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            I+DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++   
Sbjct: 359  ILDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSEA 417

Query: 465  NDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
              E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+    +R
Sbjct: 418  GRESDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVR 477

Query: 524  HIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMS 581
             + +D +  ++EW+ P  R I     N  QVV+A+  G  +Y+   + G+L ++   EM 
Sbjct: 478  LVLQDSKALVSEWKEPQGRNISVAACNHTQVVLAV--GRALYYLQILAGELKQISTTEME 535

Query: 582  GDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLL 638
             +VACLDI  + E    S   AVG + D + R+L L    C   L  + +     P S+L
Sbjct: 536  HEVACLDITPLGESSSESPLCAVGLWTDISARMLKL---PCFTPLHKEMLGGEIIPRSIL 592

Query: 639  FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
                +             S +L   L +G LF   +D+ TG LS+ +   LG +P  L +
Sbjct: 593  MTTFE------------GSYYLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRT 640

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
                  + +   S RP + Y    + + + ++ + + Y    +S+   + +     + L 
Sbjct: 641  FRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLT 700

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLM------VIIETDQGALTAEEREAAKK 812
            + TI+ + +  +   +PL  +PRR   Q   +        V I+   GA++A    A+ +
Sbjct: 701  IGTIDEI-QKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEIQDASGAISAVRPSASTQ 759

Query: 813  ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT 872
                              + +    +K  P S   +     E  + V  + V+D  +   
Sbjct: 760  -----------------ALSSSVSSSKLFPSSTSPHETSFGEEVE-VHSLLVVDQHTFEV 801

Query: 873  TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK 932
                +   +E   S+ +     K+      VGTA      P+     G I ++ +  +GK
Sbjct: 802  LHAHQFLPSEYGLSLVSCRL-GKDPSVYFIVGTAMVYPEEPEPK--QGRIIVFHYT-DGK 857

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINT 992
             L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + T
Sbjct: 858  -LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKT 916

Query: 993  YRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
              D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++ 
Sbjct: 917  KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV----- 1107
             +  +D +   +E+                   ++E+  FH+G+ V      SLV     
Sbjct: 977  CQ--KDSAATTDEE----------------RQHLQEVGVFHLGEFVNVFCHGSLVLQNLG 1018

Query: 1108 ----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSA 1163
                P  G SV++GTV G +G + + S          L+  + +    +   +H  +RS 
Sbjct: 1019 ESSTPTQG-SVLFGTVNGMIGLVTSLSEGWH-SLLLDLQNRLNKVIKSVGKIEHSFWRSF 1076

Query: 1164 YFPVKD-----VIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            Y   K       IDGDL E F    LDL R    E+  T
Sbjct: 1077 YTERKTEQATGFIDGDLIESF----LDLGRAKMQEVVST 1111


>gi|15233515|ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
 gi|73620956|sp|O49552.2|DDB1B_ARATH RecName: Full=DNA damage-binding protein 1b; AltName: Full=UV-damaged
            DNA-binding protein 1b; Short=DDB1b
 gi|110739453|dbj|BAF01636.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
 gi|332659001|gb|AEE84401.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
          Length = 1088

 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 283/1241 (22%), Positives = 512/1241 (41%), Gaps = 192/1241 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y++T Q+PT +  +  GNF+  +   ++VA+   +E  LL P+    ++T++   ++
Sbjct: 3    VWNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQG---LQTILDVPLY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN-PSKNVFDKIHQETFGKSGCRRIVPG 117
            G I ++  FR  G  +D++ V ++  +  +L+++  S  +  +   +   + G R    G
Sbjct: 60   GRIATMELFRPHGEAQDFLFVATERYKFCVLQWDYESSELITRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--VIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCT 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSEP-VDNGANMLV 235
             P  A +  D  +A             +++  YE+ L   N V   WS+  +DNGA++L+
Sbjct: 174  KPTIAVLYQDNKDA-------------RHVKTYEVSLKDKNFVEGPWSQNNLDNGADLLI 220

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLF 295
             VP       GVL+  E  ++Y +    +    IP R  +    G + +  +        
Sbjct: 221  PVPSP---LCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDLDGSR------- 267

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
             +LL    G I  + + H+ E V+ LKI+      + +S+  L +  +F  S +G+  L 
Sbjct: 268  -YLLGDHAGLIHLLVITHEKEKVTGLKIELLGETSIASSISYLDNAVVFVGSSYGDSQLI 326

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            +   +   PD + S   ++E                      +  +L PI+D  + +L  
Sbjct: 327  K---LNLQPDAKGSYVEILE----------------------KYVNLGPIVDFCVVDLER 361

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            +   Q+ T  G     SLRI+R G+ ++E A  +L G+   +W++K ++++ FD ++VVS
Sbjct: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLKSSIDEAFDTFLVVS 420

Query: 476  FNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--I 531
            F + T  L ++I + +EE    GFL    +L       + L+QV  + +R +    R   
Sbjct: 421  FISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR 480

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIAS 591
            N+W  P   ++    +N  QV++A  GG L+Y E+   G L EV+   +  +V+CLDI  
Sbjct: 481  NKWDAPAGFSVNVATANASQVLLATGGGHLVYLEIG-DGTLTEVKHVLLEYEVSCLDINP 539

Query: 592  VPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGG 648
            + +    S+  AVG + D ++RI  L PD  + +++ + +     P S+L    +     
Sbjct: 540  IGDNPNYSQLAAVGMWTDISVRIFVL-PD--LTLITKEELGGEIIPRSVLLCAFEGIS-- 594

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                      +L   L +G L    +D   G+L D +   LG RP  L +        + 
Sbjct: 595  ----------YLLCALGDGHLLNFQLDTSCGKLRDRKKVSLGTRPITLRTFSSKSATHVF 644

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
              S RP + Y +  + L + ++ + + +   F+S    + +       L + TI+ + + 
Sbjct: 645  AASDRPAVIYSNNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDI-QK 703

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
             +   +P+    RR   Q + +    I   +   +AEE E+      +A       +  +
Sbjct: 704  LHIRTIPIGEHARRICHQEQTRTFA-ISCLRNEPSAEESESHFVRLLDAQSFEFLSSYPL 762

Query: 829  DQMENG---------DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
            D  E G         DD+N Y  +    Y  P+ E++     I V          + E +
Sbjct: 763  DAFECGCSILSCSFTDDKNVYYCVG-TAYVLPE-ENEPTKGRILVFIVEEGRLQLITEKE 820

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
               A +S+   N      G LLA    K              I +Y+++        L  
Sbjct: 821  TKGAVYSLNAFN------GKLLASINQK--------------IQLYKWMLRDDGTRELQS 860

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
                      C   G +LA       LY                      + T  D I V
Sbjct: 861  E---------CGHHGHILA-------LY----------------------VQTRGDFIAV 882

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+ +S     Y+ +E  +   A D    W+TA   ++ D   G D   NI+ V+     
Sbjct: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDIYLGTDNCFNIFTVK----- 937

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP-------GGGE 1112
                         K  +G  +    +ME + ++H+G+ V   +  SLV        G   
Sbjct: 938  -------------KNNEGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLPDSDIGQIP 984

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPV 1167
            +VI+GTV G +G ++A   ++   F   L+  +R+    + G  H  +RS          
Sbjct: 985  TVIFGTVSGMIG-VIASLPQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 1043

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            K  +DGDL E F  LS     +I+  +D    E+ K++EE+
Sbjct: 1044 KGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEEL 1084


>gi|410912407|ref|XP_003969681.1| PREDICTED: DNA damage-binding protein 1-like [Takifugu rubripes]
          Length = 1140

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 288/1237 (23%), Positives = 503/1237 (40%), Gaps = 169/1237 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT + A I G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYN---PSKNVFDKIHQETFGKSGCRRIVPGQ 118
              +  FR  G  KD + + +      ILEY     S ++  + H       G R    G 
Sbjct: 62   AVMELFRPKGESKDLLFILTSKYNACILEYKQNGESIDIITRAHGNVKDPIG-RPSETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               VDP+ R + +   +    V  L+RD       +  LE  +   + +       G   
Sbjct: 121  IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAYNIRLEELQVIDVHFLY-----GCQA 175

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTV 237
            P    I        QD  G+     + +L   E + G       W  E V+  A+M++ V
Sbjct: 176  PTVCFIY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIPV 222

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAAT 288
            P   +   G ++  +  + Y N         P ++    V   R D    R +L      
Sbjct: 223  P---EPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLL-----G 274

Query: 289  HRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
              +  LF  LL+ E        L      + +L ++      +   +  L +G +F  S 
Sbjct: 275  DMEGRLFMLLLEKE-------ELMDGTVALKDLHVELLGETSIAECLTYLDNGVVFVGSR 327

Query: 349  FGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
             G+  L +   +  D + + S  T+MET                        +L PI+DM
Sbjct: 328  LGDPQLVK---LNVDSNDQGSFVTVMET----------------------FTNLGPIVDM 362

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
             + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++     E 
Sbjct: 363  CVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSEAGRET 421

Query: 469  DAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
            D  +V+SF   T VL + GE VEE    GF+D   +     +  + L+Q+    +R + +
Sbjct: 422  DDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHNQLIQITSGSVRLVLQ 481

Query: 528  DGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVA 585
            D +  ++EW+ P  R I     N  QVV+A+  G  +Y+   + G+L ++   EM  +VA
Sbjct: 482  DSKALVSEWKEPQGRNISVAACNHTQVVLAV--GRALYYLQILAGELKQISTTEMEHEVA 539

Query: 586  CLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEV 642
            CLDI  + E    S   AVG + D + R+L L    C   L  + +     P S+L    
Sbjct: 540  CLDITPLGEAGAESPLCAVGLWTDISARVLKL---PCFTPLHKEMLGGEIIPRSILMTTF 596

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
            +             S +L   L +G LF   +D+ TG LS+ +   LG +P  L +    
Sbjct: 597  E------------GSYYLLCALGDGALFYFGLDLQTGALSECKKVTLGTQPTVLRTFRSL 644

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              + +   S RP + Y    + + + ++ + + Y    +S+   + +     + L + TI
Sbjct: 645  STSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTI 704

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEA 817
            + + +  +   +PL  +PRR   Q   +   ++ +     D    T+  R +A  +   +
Sbjct: 705  DEI-QKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEIQDVSGTTSPVRPSASTQALSS 763

Query: 818  AGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
            +                   +K  P S   +     E  + +  + V+D  +       +
Sbjct: 764  SMS----------------SSKLFPSSTSPHESSFGEEVE-IHSLLVVDQHTFEVLHAHQ 806

Query: 878  LQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELL 937
               +E A S+ +     K+      VGTA  + +  +     G I ++ +  +GK L+ +
Sbjct: 807  FLPSEYALSMVSCRL-GKDPSVYFVVGTA--MVYPEEAEPKQGRIIVFHYT-DGK-LQTV 861

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR-KCENKLFPNTIVS--INTYR 994
             + +V+G   ++ +F G+LLA I   +RLY+   ++ LR +C +    N I++  + T  
Sbjct: 862  AEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECSHY---NNIMALYLKTKG 918

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++  +
Sbjct: 919  DFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ 978

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV------- 1107
              +D +   +ED                   ++E+  FH+G+ V      SLV       
Sbjct: 979  --KDSAATTDED----------------RQHLQEVGVFHLGEFVNVFCHGSLVLQNLGET 1020

Query: 1108 --PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF 1165
              P  G SV++GTV G +G + + S          L+  + +    +   +H  +RS + 
Sbjct: 1021 STPTQG-SVLFGTVTGMIGLVTSLSEGWH-SLLLDLQNRLNKVIKSVGKIEHSFWRSFHT 1078

Query: 1166 P-----VKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
                   K  IDGDL E F    LDL R    E+  T
Sbjct: 1079 ERKTEQAKGFIDGDLIESF----LDLGRAKMQEVVST 1111


>gi|62318656|dbj|BAD95136.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
          Length = 1088

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 283/1241 (22%), Positives = 511/1241 (41%), Gaps = 192/1241 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y++T Q+PT +  +  GNF+  +   ++VA+   +E  LL P+    ++T++   ++
Sbjct: 3    VWNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQG---LQTILDVPLY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN-PSKNVFDKIHQETFGKSGCRRIVPG 117
            G I ++  FR  G  +D++ V ++  +  +L+++  S  +  +   +   + G R    G
Sbjct: 60   GRIATMELFRPHGEAQDFLFVATERYKFCVLQWDYESSELITRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--VIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCT 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSEP-VDNGANMLV 235
             P  A +  D  +A             +++  YE+ L   N V   WS+  +DNGA++L+
Sbjct: 174  KPTIAVLYQDNKDA-------------RHVKTYEVSLKDKNFVEGPWSQNNLDNGADLLI 220

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLF 295
             VP       GVL+  E  ++Y +    +    IP R  +    G + +  +        
Sbjct: 221  PVPSP---LCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDLDGSR------- 267

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
             +LL    G I  + + H+ E V+ LKI+      + +S+  L +  +F  S +G+  L 
Sbjct: 268  -YLLGDHAGLIHLLVITHEKEKVTGLKIELLGETSIASSISYLDNAVVFVGSSYGDSQLI 326

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
            +   +   PD + S   ++E                      +  +L PI+D  + +L  
Sbjct: 327  K---LNLQPDAKGSYVEILE----------------------KYVNLGPIVDFCVVDLER 361

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
            +   Q+ T  G     SLRI+R G+ ++E A  +L G+   +W++K ++++ FD ++VVS
Sbjct: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLKSSIDEAFDTFLVVS 420

Query: 476  FNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--I 531
            F + T  L ++I + +EE    GFL    +L       + L+QV  + +R +    R   
Sbjct: 421  FISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR 480

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIAS 591
            N+W  P   ++    +N  QV++A  GG L+Y E+   G L EV+   +  +V+CLDI  
Sbjct: 481  NKWDAPAGFSVNVATANASQVLLATGGGHLVYLEIG-DGTLTEVKHVLLEYEVSCLDINP 539

Query: 592  VPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGG 648
            + +    S+  AVG + D ++RI  L PD  + +++ + +     P S+L    +     
Sbjct: 540  IGDNPNYSQLAAVGMWTDISVRIFVL-PD--LTLITKEELGGEIIPRSVLLCAFEGIS-- 594

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                      +L   L +G L    +D   G+L D +   LG RP  L +        + 
Sbjct: 595  ----------YLLCALGDGHLLNFQLDTSCGKLRDRKKVSLGTRPITLRTFSSKSATHVF 644

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
              S RP + Y +  + L + +S + + +   F+S    + +       L + TI+ + + 
Sbjct: 645  AASDRPAVIYSNNKKLLYSNVSLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDI-QK 703

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
             +   +P+    RR   Q + +    I   +   +AEE E+      +A       +  +
Sbjct: 704  LHIRTIPIGEHARRICHQEQTRTFA-ISCLRNEPSAEESESHFVRLLDAQSFEFLSSYPL 762

Query: 829  DQMENG---------DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
            D  E G         DD+N Y  +    Y  P+ E++     I V          + E +
Sbjct: 763  DAFECGCSILSCSFTDDKNVYYCVG-TAYVLPE-ENEPTKGRILVFIVEEGRLQLITEKE 820

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
               A +S+   N      G LLA    K              I +Y+++        L  
Sbjct: 821  TKGAVYSLNAFN------GKLLASINQK--------------IQLYKWMLRDDGTRELQS 860

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
                      C   G +LA       LY                      + T  D I V
Sbjct: 861  E---------CGHHGHILA-------LY----------------------VQTRGDFIAV 882

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+ +S     Y+ +E  +   A D    W+ A   ++ D   G D   NI+ V+     
Sbjct: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMAAVEILNDDIYLGTDNCFNIFTVK----- 937

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP-------GGGE 1112
                         K  +G  +    +ME + ++H+G+ V   +  SLV        G   
Sbjct: 938  -------------KNNEGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLPDSDIGQIP 984

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPV 1167
            +VI+GTV G +G ++A   ++   F   L+  +R+    + G  H  +RS          
Sbjct: 985  TVIFGTVSGMIG-VIASLPQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 1043

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            K  +DGDL E F  LS     +I+  +D    E+ K++EE+
Sbjct: 1044 KGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEEL 1084


>gi|357135348|ref|XP_003569272.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
            distachyon]
          Length = 1074

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 276/1239 (22%), Positives = 517/1239 (41%), Gaps = 206/1239 (16%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT +  +  GNF+      ++VA+   +E  LL P+    ++ +V   ++G I
Sbjct: 6    YVVTAHKPTAVSHSCVGNFTAPHHLNLIVAKCNRMEIYLLTPQG---LQLMVDVPLYGTI 62

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGC-------RRI 114
             +L  FR     +D++ +  +  R ++L +       D  + E   +SG        R  
Sbjct: 63   ATLELFRSRSETQDFLFISMERYRCIVLHW-------DGRNSELITRSGGDVSDFIGRPT 115

Query: 115  VPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC 174
              GQ   +DP+ R  +IG      L  V+  D    L     L       +V  I  +  
Sbjct: 116  DNGQIGVIDPQNR--LIGLSLYDGLFKVIPFDNKGNL--KEALNIRLQEFLVLDIKFL-Y 170

Query: 175  GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANM 233
            G   P    +  D  ++    T + A E +            + V   WS+  +DN A++
Sbjct: 171  GCARPTVVVLHQDNKDSRHVKTYEVALEDK------------DFVEGSWSQSNLDNSAHL 218

Query: 234  LVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKT 293
            L+ VP GG     V++  E+ ++Y +      +A+  +++ +   R V  V     R   
Sbjct: 219  LIPVPLGG-----VIIIGEHTIVYCSA--TTFKALSIKQSII---RAVGRVDPDGSR--- 265

Query: 294  LFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
               +L     G +  + + H+   V++LK  Y     + +++  L SG ++  S FG+  
Sbjct: 266  ---YLYGDNTGALHLIVITHEWGRVTDLKTHYMGETSIASTISYLDSGLVYIGSRFGDSQ 322

Query: 354  LYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANL 413
            L +   I AD     +S++ +E                    +EQ  +  PI+D  + + 
Sbjct: 323  LIKLN-IQAD-----ASASFVEI-------------------LEQFMNTGPIVDFCVVDT 357

Query: 414  FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIV 473
                  Q+ T  G     S+R +R G+ +++ A  +L G+   +W++K ++ND +D ++V
Sbjct: 358  ERRGQGQVITCSGAYKDGSIRAVRNGVVITDQASVELRGM-KGLWSMKSSLNDPYDTFLV 416

Query: 474  VSFNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
            V+F N T  L +++   +EEV   GF   T +LA      + L+QV    +R +      
Sbjct: 417  VTFINETHFLAMNMENELEEVDIKGFDSETQTLACGSAIHNQLIQVTSRSVRLVSSVSLE 476

Query: 531  -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
             +++W  P + ++    +N  QV++A     L+Y E+  + +++ V+  ++  +++CLDI
Sbjct: 477  LLDQWFAPARFSVNVAAANANQVLLATGNCHLVYLEI-TSSKIVPVKHIQLEHEISCLDI 535

Query: 590  ASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGG 648
              + E  + S   AVG + D ++RI SL     ++   +  V   P S+L   ++A    
Sbjct: 536  NPIGENPQYSSLAAVGMWTDISVRIFSLPGLKLIRKEHLGEV--VPRSVLLCTIEAVS-- 591

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                      +L  GL +G LF  V++  T +LSD R   LG +P  L       R  + 
Sbjct: 592  ----------YLFCGLGDGHLFSFVLNSSTCELSDRRRVSLGAQPISLHIFSSQNRTHVF 641

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
              S RP + Y    + L +  + + + +   F++    E +V    + L +  I  + + 
Sbjct: 642  AASDRPAVIYSSDQKLLYSYANLKEVNHVCPFNTAVFPESIVLAKESELSIGEINDIRQL 701

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
               T +PL+   RR   Q + + + +                                  
Sbjct: 702  HIRT-IPLKEQARRICHQEQSQTLALC--------------------------------- 727

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
                       + P       +  AES K    +R+LD ++        L + E   SI 
Sbjct: 728  ----------SFKP------KFIHAESGKHF--VRLLDYQTFWVLSTHTLDEFECGCSIV 769

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
            + +F D ++     VGTA  L +  +     G I I  F+ E + L L+ + + +G   +
Sbjct: 770  SCSFSDDDN-FYYCVGTAYILPY--EIEPTKGRILI--FLVEERKLRLVAERETKGAVYS 824

Query: 949  LCQFQGRLLAGIGPVLRLYDL----GKKRLLRKCENKLFPNTIVSIN--TYRDRIYVGDI 1002
            L    G+LLA +   + +Y       + +L  +C    +   +++++  T+   I VGD+
Sbjct: 825  LNALTGKLLAAVNQKIIVYKWVRRDNRHQLQSECS---YRGCVLALHTQTHGHFIVVGDM 881

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
              S    +Y+ +E  + +   D   +W+TA   +D D   GAD   N++ +         
Sbjct: 882  VRSVSLLRYKYEEGLIEVVTRDFNTKWITAVAMLDDDIYIGADNCCNLFTLH-------- 933

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES-------VI 1115
                             +G P  + E   +H+GD+V  +   SLV    +S       VI
Sbjct: 934  -----------------SGRPGVVGE---YHLGDLVNRMHHGSLVMHHTDSEIGQIPTVI 973

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY-----FPVKDV 1170
            +GT+ G++G + +F   D   F   L+  + +    +    H+ +RS Y        ++ 
Sbjct: 974  FGTISGAIGVIASF-PYDQYVFLEKLQSVLVKFIKSVGNLSHVEWRSFYNVSRTAEARNF 1032

Query: 1171 IDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            +DGDL E F +LS     +++  +     E+ K +EE+R
Sbjct: 1033 VDGDLIESFLSLSPSKMEEVSQVMGLRADELCKIVEELR 1071


>gi|348526664|ref|XP_003450839.1| PREDICTED: DNA damage-binding protein 1-like [Oreochromis niloticus]
          Length = 1140

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 285/1237 (23%), Positives = 497/1237 (40%), Gaps = 169/1237 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT + A I G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGRI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  +    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTSKYNACILEYKQTGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  VDP+ R + +   +    V  L+RD       +  LE  +   + +       G
Sbjct: 122  G----IVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLY-----G 172

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
               P    I        QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 173  CQAPTVCFIY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IPVP---EPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E        L      + +L ++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKE-------ELMDGTVALKDLHVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S   +MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVAVMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++    
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSEAG 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+    +R 
Sbjct: 419  RETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + +D +  ++EW+ P  R I     N  QVV+A+  G  +Y+   + G+L ++   EM  
Sbjct: 479  VLQDSKTLVSEWKEPQGRNISVAACNHTQVVLAV--GRALYYLQILAGELKQISTTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLF 639
            +VACLDI  + EG   S   AVG + D + R+L L    C   L  + +     P S+L 
Sbjct: 537  EVACLDITPLGEGGGESPLCAVGLWTDISARVLKL---PCFTALHKEMLGGEIIPRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               +             S +L   L +G LF   +D+ TG LS+ +   LG +P  L + 
Sbjct: 594  TTFE------------GSYYLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                 + +   S RP + Y    + + + ++ + + Y    +S+   + +     + L +
Sbjct: 642  RSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PRR   Q   +   ++ +     D    T+  R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEIQDVSGTTSAVRPSASTQA 760

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
              ++                   +K  P S   +     E  + V  + V+D  +     
Sbjct: 761  LSSS----------------VSSSKLFPSSTSPHETSFGEEVE-VHNLLVVDQHTFEVLH 803

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
              +   +E A S+ +     K+      VGTA  + +  +     G I ++ +  +GK L
Sbjct: 804  AHQFLPSEYALSLVSCRL-GKDPSVYFIVGTA--MVYPEEAEPKQGRIIVFHYT-DGK-L 858

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
            + + + +V+G   ++ +F G+ LA I   +RLY+   ++ LR   N       + + T  
Sbjct: 859  QTVAEKEVKGAVYSMVEFNGKFLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKG 918

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++  +
Sbjct: 919  DFILVGDLMRSVLLLAYKSMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ 978

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV------- 1107
              +D +   +E+                   ++E+  FH+G+ V      SLV       
Sbjct: 979  --KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVLQNLGES 1020

Query: 1108 --PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF 1165
              P  G SV++GTV G +G + +  S         L+  + +    +   +H  +RS + 
Sbjct: 1021 STPTQG-SVLFGTVNGMIGLVTSL-SEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHT 1078

Query: 1166 PVKD-----VIDGDLCEQFPTLSLDLQRKIADELDRT 1197
              K       IDGDL E F    LDL R    E+  T
Sbjct: 1079 ERKTEQATGFIDGDLIESF----LDLGRAKMQEVVST 1111


>gi|238594622|ref|XP_002393535.1| hypothetical protein MPER_06713 [Moniliophthora perniciosa FA553]
 gi|215461159|gb|EEB94465.1| hypothetical protein MPER_06713 [Moniliophthora perniciosa FA553]
          Length = 239

 Score =  227 bits (578), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 107/221 (48%), Positives = 154/221 (69%)

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
            E L + + + +PLAL  FQGRL+AG+G  LR+YD+GKK+LLRK ENK F + IV++NT  
Sbjct: 7    EDLPRPKTDIVPLALLGFQGRLVAGVGKALRIYDIGKKKLLRKVENKQFASAIVALNTQG 66

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
             RI V D+QES  F  Y+  EN+L +FADD+ PRW++A   +D++T+A  D+FGNI+  R
Sbjct: 67   SRILVADMQESVSFAVYKPPENRLLVFADDTQPRWISAMTMVDYNTVACGDRFGNIFVNR 126

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESV 1114
            L    SD++++DPTG  I  E+G L GAP+K + +  FHVGD+VTS+ K ++V GG E +
Sbjct: 127  LDPKESDQVDDDPTGAGILHEKGILMGAPHKTKMLAHFHVGDLVTSIHKVAMVAGGREIL 186

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGR 1155
            +Y  + G++G ++ F S++DVDF S LE HMR E     G+
Sbjct: 187  LYTGLHGTIGILVPFVSKEDVDFISTLEQHMRSEQGQFGGK 227


>gi|427788481|gb|JAA59692.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
          Length = 1156

 Score =  227 bits (578), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 289/1261 (22%), Positives = 516/1261 (40%), Gaps = 183/1261 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFG 59
            Y Y +T  +PTG+ A   GNF+      +++A+   LE+  + PE    +  +    I+G
Sbjct: 3    YNYVVTAHKPTGVSACATGNFTSPDDINLILAKNTRLEIYVVSPEG---LRPVKEIGIYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILE---YNPSKNVFDKIHQETFGKSGCRRIVP 116
             I  +  +R  G +KD +   +      ILE   Y  S  +  K H      +  R    
Sbjct: 60   RISIMKLYRPAGEKKDLLFFLTAKYNAAILECVQYGDSIEIITKAHG-NIADTFSRPSET 118

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            G    +DP+ R + +   +    V  L++D       +  +E      + +       G 
Sbjct: 119  GNIGIIDPECRVIGLRLYDGLFKVIPLDKDNRELKAFNIRMEELTVQDMEFL-----HGC 173

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSEP-VDNGANML 234
              P    +        QDS         +++  YE+ L     V   W +  V++ AN++
Sbjct: 174  KTPTIVLLH-------QDSQA-------RHMKTYEVSLKDKEFVKGPWKQDHVESEANLV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            + VP   +   G L+  +  + Y N                      ++++    RQ T+
Sbjct: 220  IAVP---EPFCGALIIGQESITYHNGDQ------------------YVVITPHLIRQSTI 258

Query: 295  FFF----------LLQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLK 339
              +          LL    G +F + LE +++      V +LK+++   I +   +  L 
Sbjct: 259  VCYGKVDANGSRYLLGDMAGRLFMLLLEREDKMDGTTTVKDLKLEFLGEITIAECITYLD 318

Query: 340  SGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQV 399
            +G ++  S  G+  L +  A   D   + S   +ME       VF               
Sbjct: 319  NGVVYVGSRLGDSQLIKLHAERND---QGSFVEIME-------VF--------------- 353

Query: 400  ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
             +L PI+DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W 
Sbjct: 354  TNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGMWP 412

Query: 460  VK------------KNVND--EFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSL 504
            ++            ++  D  E D  +V+SF   T VL + GE VEE   +GF  +  + 
Sbjct: 413  LRVGPGVAPHGGDGRDPGDSAERDNTLVLSFVRQTRVLMLSGEEVEETELAGFDTSQQTF 472

Query: 505  AVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELI 562
                + +  L+QV  + +R +    +  +NEW+ PG R I  V  N+ QVV A+   E+ 
Sbjct: 473  FCGNVRNKQLIQVTAAAVRLVDSQTKQLLNEWKPPGARNISVVTCNQSQVVCAVR-KEVF 531

Query: 563  YFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDC 621
              E+   G L ++   E+  +VACLDI  + E  +++   AVG + D +IRILSL     
Sbjct: 532  CLEIG-DGVLNQISNAELENEVACLDITPLSEKAEKATLCAVGLWTDISIRILSLPS--- 587

Query: 622  MQILSVQSVSSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTG 679
            +Q L  +++     P S+L    +               +L   L +G LF  +++  TG
Sbjct: 588  LQQLQKENIGGEIIPRSILITTFE------------GIHYLLCALGDGSLFYFLLEATTG 635

Query: 680  QLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAAS 739
             L+D +   LG +P  L +      + +   S RP + Y    + + + ++ + + +   
Sbjct: 636  ALTDRKKVTLGTQPTVLKTFKSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCP 695

Query: 740  FSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQ 799
             +S+   + +     N L + TI+ + +  +   +PL   PRR   Q   +   +I    
Sbjct: 696  LNSEGYPDSLALANDNTLLIGTIDEI-QKLHIRTVPLGELPRRIAYQEATQTFGVITIRN 754

Query: 800  GALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWV 859
              L +      +      A    +        + G      D L  E            +
Sbjct: 755  DILGSSGLTPVRPSASTQAQNVTHSAQMSSIFKPGSVSTGNDQLGQEVE----------I 804

Query: 860  SCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGL--QFWPKRNI 917
              + ++D  +       +    E A SI +    + +  T   VGTA  L  +  PK+  
Sbjct: 805  HNLLIIDQHTFEVLHAHQFMQTEYAMSIVSTRLGN-DPNTYYIVGTANVLPDESDPKQ-- 861

Query: 918  VAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK 977
              G I ++ +V +GK LE + + +++G P ++ +F G+LLA I   +RL++   +R LR 
Sbjct: 862  --GRIVVFHWV-DGK-LEHVAEQEIKGAPYSMLEFNGKLLAAINSTVRLFEWNAERELRN 917

Query: 978  CENKLFPNTI-VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI 1036
             E   F N + + +    D + VGD+  S     Y+  E      A D    W+++   +
Sbjct: 918  -ECSHFNNILALYLRAKGDFVLVGDLMRSMSLLAYKPLEGNFEEIARDYQTNWMSSVEIL 976

Query: 1037 DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGD 1096
            D DT  GA+   N++  +  +D +   +E+                   ++E+ QFH+G+
Sbjct: 977  DDDTFLGAESTTNLFVCQ--KDSAATTDEE----------------RQHLQEVGQFHLGE 1018

Query: 1097 VVTSLQKASLV---PGGGE-----SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQE 1148
             V   +  SLV   PG        SV++GT+ G++G +    + D   F S ++  + + 
Sbjct: 1019 FVNVFRHGSLVMQHPGETSSPTQGSVLFGTIHGAIGLVSQLPA-DFYTFLSEVQEKLTKV 1077

Query: 1149 HPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILK 1203
               +   DH  +RS        P    IDGDL E F  LS D  +++   +    G  +K
Sbjct: 1078 IKSVGKIDHAFWRSFSTERKTEPAVGFIDGDLIESFLDLSRDKMQEVVQGIQMDDGSGMK 1137

Query: 1204 K 1204
            +
Sbjct: 1138 R 1138


>gi|427780151|gb|JAA55527.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
          Length = 1181

 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 294/1271 (23%), Positives = 521/1271 (40%), Gaps = 178/1271 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFG 59
            Y Y +T  +PTG+ A   GNF+      +++A+   LE+  + PE    +  +    I+G
Sbjct: 3    YNYVVTAHKPTGVSACATGNFTSPDDINLILAKNTRLEIYVVSPEG---LRPVKEIGIYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILE---YNPSKNVFDKIHQETFGKSGCRRIVP 116
             I  +  +R  G +KD +   +      ILE   Y  S  +  K H      +  R    
Sbjct: 60   RISIMKLYRPAGEKKDLLFFLTAKYNAAILECVQYGDSIEIITKAHG-NIADTFSRPSET 118

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            G    +DP+ R + +   +    V  L++D       +  +E      + +       G 
Sbjct: 119  GNIGIIDPECRVIGLRLYDGLFKVIPLDKDNRELKAFNIRMEELTVQDMEFL-----HGC 173

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSEP-VDNGANML 234
              P    +        QDS         +++  YE+ L     V   W +  V++ AN++
Sbjct: 174  KTPTIVLLH-------QDSQA-------RHMKTYEVSLKDKEFVKGPWKQDHVESEANLV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKN-------QGHPDVRAVIPRRADLPAERGVLIVSAA 287
            + VP   +   G L+  +  + Y N         H   ++ I     + A     ++   
Sbjct: 220  IAVP---EPFCGALIIGQESITYHNGDQYVVITPHLIRQSTIVCYGKVDANGSRYLLGDM 276

Query: 288  THRQKTLFFFLLQTE-------------YGDIFKVTLEHDNEH-----VSELKIKYFDTI 329
              R   LF  LL+ E              G +F + LE +++      V +LK+++   I
Sbjct: 277  AGR---LFMLLLEREDKMDGTXYLLGDMAGRLFMLLLEREDKMDGTTTVKDLKLEFLGEI 333

Query: 330  PVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRG 389
             +   +  L +G ++  S  G+  L +  A   D   + S   +ME       VF     
Sbjct: 334  TIAECITYLDNGVVYVGSRLGDSQLIKLHAERND---QGSFVEIME-------VF----- 378

Query: 390  LKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ 449
                       +L PI+DM + +L  +   Q+ T  G     SLRI+R G+ + E A   
Sbjct: 379  ----------TNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASID 428

Query: 450  LPGVPSAVWTVK------------KNVND--EFDAYIVVSFNNATLVLSI-GETVEEVSD 494
            LPG+   +W ++            ++  D  E D  +V+SF   T VL + GE VEE   
Sbjct: 429  LPGI-KGMWPLRVGPGVAPHGGDGRDPGDSAERDNTLVLSFVRQTRVLMLSGEEVEETEL 487

Query: 495  SGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQV 552
            +GF  +  +     + +  L+QV  + +R +    +  +NEW+ PG R I  V  N+ QV
Sbjct: 488  AGFDTSQQTFFCGNVRNKQLIQVTAAAVRLVDSQTKQLLNEWKPPGARNISVVTCNQSQV 547

Query: 553  VIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTI 611
            V A+   E+   E+   G L ++   E+  +VACLDI  + E  +++   AVG + D +I
Sbjct: 548  VCAVR-KEVFCLEIG-DGVLNQISNAELENEVACLDITPLSEKAEKATLCAVGLWTDISI 605

Query: 612  RILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVL 669
            RILSL     +Q L  +++     P S+L    +          H    +L   L +G L
Sbjct: 606  RILSLPS---LQQLQKENIGGEIIPRSILITTFEGI--------H----YLLCALGDGSL 650

Query: 670  FRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPL 729
            F  +++  TG L+D +   LG +P  L +      + +   S RP + Y    + + + +
Sbjct: 651  FYFLLEATTGALTDRKKVTLGTQPTVLKTFKSLSTSNVFACSDRPTVIYSSNHKLVFSNV 710

Query: 730  SYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKK 789
            + + + +    +S+   + +     N L + TI+ + +  +   +PL   PRR   Q   
Sbjct: 711  NLKEVNHMCPLNSEGYPDSLALANDNTLLIGTIDEI-QKLHIRTVPLGELPRRIAYQEAT 769

Query: 790  KLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYG 849
            +   +I      L +      +      A    +        + G      D L  E   
Sbjct: 770  QTFGVITIRNDILGSSGLTPVRPSASTQAQNVTHSAQMSSIFKPGSVSTGNDQLGQEVE- 828

Query: 850  YPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGL 909
                     +  + ++D  +       +    E A SI +    + +  T   VGTA  L
Sbjct: 829  ---------IHNLLIIDQHTFEVLHAHQFMQTEYAMSIVSTRLGN-DPNTYYIVGTANVL 878

Query: 910  --QFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY 967
              +  PK+    G I ++ +V +GK LE + + +++G P ++ +F G+LLA I   +RL+
Sbjct: 879  PDESDPKQ----GRIVVFHWV-DGK-LEHVAEQEIKGAPYSMLEFNGKLLAAINSTVRLF 932

Query: 968  DLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSV 1026
            +   +R LR  E   F N + + +    D + VGD+  S     Y+  E      A D  
Sbjct: 933  EWNAERELRN-ECSHFNNILALYLRAKGDFVLVGDLMRSMSLLAYKPLEGNFEEIARDYQ 991

Query: 1027 PRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKM 1086
              W+++   +D DT  GA+   N++  +  +D +   +E+                   +
Sbjct: 992  TNWMSSVEILDDDTFLGAESTTNLFVCQ--KDSAATTDEE----------------RQHL 1033

Query: 1087 EEIVQFHVGDVVTSLQKASLV---PGGGE-----SVIYGTVMGSLGAMLAFSSRDDVDFF 1138
            +E+ QFH+G+ V   +  SLV   PG        SV++GT+ G++G +    + D   F 
Sbjct: 1034 QEVGQFHLGEFVNVFRHGSLVMQHPGETSSPTQGSVLFGTIHGAIGLVSQLPA-DFYTFL 1092

Query: 1139 SHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADE 1193
            S ++  + +    +   DH  +RS        P    IDGDL E F  LS D  +++   
Sbjct: 1093 SEVQEKLTKVIKSVGKIDHAFWRSFSTERKTEPAVGFIDGDLIESFLDLSRDKMQEVVQG 1152

Query: 1194 LDRTPGEILKK 1204
            +    G  +K+
Sbjct: 1153 IQMDDGSGMKR 1163


>gi|259155222|ref|NP_001158852.1| DNA damage-binding protein 1 [Salmo salar]
 gi|223647700|gb|ACN10608.1| DNA damage-binding protein 1 [Salmo salar]
          Length = 1139

 Score =  226 bits (575), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 292/1235 (23%), Positives = 504/1235 (40%), Gaps = 166/1235 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT + A I G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYN---PSKNVFDKIHQETFGKSGCRRIVPGQ 118
              +  FR  G  KD + + +      ILEY     S ++  + H     + G R    G 
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQNGESIDIITRAHGNVQDRIG-RPSETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTI-VYSICGIDCGFD 177
               VDP+ R  MIG      L  V+  D   R   +  +   +   I V+ + G      
Sbjct: 121  IGIVDPECR--MIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQA--- 175

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVT 236
             P    I        QD  G+     + +L   E + G       W  E V+  A+M++ 
Sbjct: 176  -PTVCFIY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAA 287
            VP   +   G ++  +  + Y N         P ++    V   R D    R +L     
Sbjct: 222  VP---EPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLL----- 273

Query: 288  THRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
               +  LF  LL+ E      V L+       +L+++      +   +  L +G +F  S
Sbjct: 274  GDMEGRLFMLLLEKEELMDGAVVLK-------DLRVELLGETSIAECLTYLDNGVVFVGS 326

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
              G+  L +   +  D +   S   +MET                        +L PI+D
Sbjct: 327  RLGDSQLVK---LNVDSNDSGSYVAVMET----------------------FTNLGPIVD 361

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
            M + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++     E
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSEAGRE 420

Query: 468  FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
             D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+   G+R + 
Sbjct: 421  TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNLQTFYCGNVAHQQLIQITSGGVRLVM 480

Query: 527  EDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV 584
            +D +  ++EW+ P  R I     N  QVV+A+  G  +Y+   ++G+L ++   EM  +V
Sbjct: 481  QDSKALVSEWKEPQGRNISVAACNSSQVVLAV--GRALYYLQILSGELKQISTVEMEHEV 538

Query: 585  ACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLE 641
            ACLDI  + EG + S   AVG + D + R+L L    C   L  + +     P S+L   
Sbjct: 539  ACLDITPLGEGGE-SPLCAVGLWTDISARVLKL---PCFTALHKEMLGGEIIPRSILMTT 594

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
             +   GG          +L   L +G LF   +D+ TG LS+ +   LG +P  L +   
Sbjct: 595  FE---GG---------YYLLCALGDGALFYFGLDLTTGVLSERKKVTLGTQPTVLRTFRS 642

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
               + +   S RP + Y    + + + ++ + + Y    +S+   + +     + L + T
Sbjct: 643  LSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGT 702

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFE 816
            I+ + +  +   +PL  +PRR   Q   +   ++ +     D    TA  R +A  +   
Sbjct: 703  IDEI-QKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSASTQALS 761

Query: 817  AAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLL 876
            ++                   +K  P S   +     E  + V  + V+D  +       
Sbjct: 762  SS----------------VSSSKLFPSSTSPHETSFGEEVE-VHSLLVVDQHTFEVLHAH 804

Query: 877  ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLEL 936
            +   +E A S+ +     ++      VGTA  + +  +     G I ++ +  +GK L+ 
Sbjct: 805  QFLQSEYALSMVSCRL-GRDPAVYFIVGTA--MVYPEEAEPKQGRIIVFHYT-DGK-LQT 859

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDR 996
            + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  D 
Sbjct: 860  VAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKGDF 919

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++  +  
Sbjct: 920  ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ-- 977

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV--------- 1107
            +D +   +E+                   ++E+  FH+G+ V      SLV         
Sbjct: 978  KDSAATTDEE----------------RQHLQEVGVFHLGEFVNVFSHGSLVLQNLGESST 1021

Query: 1108 PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPV 1167
            P  G SV++GTV G +G + +  S         L+  + +    +   +H  +RS +   
Sbjct: 1022 PTQG-SVLFGTVNGMIGLVTSL-SEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTER 1079

Query: 1168 KD-----VIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            K       IDGDL E F    LDL R    E+  T
Sbjct: 1080 KTEQATGFIDGDLIESF----LDLGRAKMQEVVST 1110


>gi|297799958|ref|XP_002867863.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297313699|gb|EFH44122.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1088

 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 283/1242 (22%), Positives = 508/1242 (40%), Gaps = 194/1242 (15%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y++T Q+PT +  +  GNF+  +   ++VA+   +E  LL P+    ++T++   ++
Sbjct: 3    VWNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQG---LQTILDVPLY 59

Query: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN-PSKNVFDKIHQETFGKSGCRRIVPG 117
            G I +L  FR  G  +D++ V ++  +  +L+++  S  +  +   +   + G R    G
Sbjct: 60   GRIATLELFRPHGEAQDFLFVATERYKFCVLQWDYESSELITRAMGDVSDRIG-RPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCT 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLG-LNHVSRKWSEP-VDNGANMLV 235
             P  A +  D  +A             +++  YE+ L   + V   WS+  +DNGA++L+
Sbjct: 174  KPTIAVLYQDNKDA-------------RHVKTYEVSLKEKDFVEGPWSQNNLDNGADLLI 220

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLF 295
             VP       GVL+  E  ++Y +    +    IP R  +    G + +  +        
Sbjct: 221  PVPSP---LCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDLDGSR------- 267

Query: 296  FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
             +LL    G I  + + H+ E V+ LKI+      + +S+  L +  +F  S +G+  L 
Sbjct: 268  -YLLGDHSGLIHLLVITHEKEKVTGLKIELLGETSIASSISYLDNAVVFVGSSYGDSQLI 326

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI-EQVESLMPIMDMRIANLF 414
            +                             QP    + V I E+  +L PI+D  + +L 
Sbjct: 327  KLN--------------------------LQPDATGSYVEILEKYVNLGPIVDFCVVDLE 360

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
             +   Q+ T  G     SLRI+R G+ ++E A  +L G+   +W++K ++++ FD ++VV
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLKSSIDEAFDTFLVV 419

Query: 475  SFNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR-- 530
            SF + T  L ++I + +EE    GFL    +L       + L+QV  + +R +    R  
Sbjct: 420  SFISETRILAMNIEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTREL 479

Query: 531  INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIA 590
             N+W  P    +    +N  QV++A  GG L+Y E+   G L EV+   +  +V+CLDI 
Sbjct: 480  RNKWDAPAGFAVNVATANASQVLLATGGGHLVYLEIG-DGTLTEVKHVLLEYEVSCLDIN 538

Query: 591  SVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVG 647
             + +    S+  AVG + D ++RI  L PD  + +++ + +     P S+L    +    
Sbjct: 539  PIGDNPNYSQLAAVGLWTDISVRIFVL-PD--LTLITKEQLGGEIIPRSVLLCAFEGIS- 594

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
                       +L   L +G L    +D  +G+L D +   LG +P  L +        +
Sbjct: 595  -----------YLLCALGDGHLLNFQLDTSSGKLRDRKKVSLGTQPITLRTFSSKSATHV 643

Query: 708  LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGE 767
               S RP + Y +  + L + ++ + + +   F+S    + +       L + TI+ + +
Sbjct: 644  FAASDRPAVIYSNNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDI-Q 702

Query: 768  TFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGN 827
              +   +P+    RR   Q + +   I    +   +AEE E       +A          
Sbjct: 703  KLHIRTIPIGEHARRICHQEQTRTFAIC-CLRNQPSAEESEMHFVRLLDAQSFEFLSTYP 761

Query: 828  MDQMENG---------DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLEL 878
            +D  E G         DD+N Y  +    Y  P+ E++     I V          + E 
Sbjct: 762  LDAFEYGCSILSCSFTDDKNVYYCVG-TAYVLPE-ENEPTKGRILVFIVEEGRLQLITEK 819

Query: 879  QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
            +   A +S+   N      G LLA    K              I +Y+++        L 
Sbjct: 820  ETKGAVYSLNAFN------GKLLAAINQK--------------IQLYKWMLRDDGTRELQ 859

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
                       C   G +LA       LY                      + T  D I 
Sbjct: 860  SE---------CGHHGHILA-------LY----------------------VQTRGDFIV 881

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+ +S     Y+ +E  +   A D    W+ A   +D D   GAD   N++ V+    
Sbjct: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMAAVEILDDDIYLGADNCFNLFTVK---- 937

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP-------GGG 1111
                          K  +G  +    +ME + ++H+G+ V   +  SLV        G  
Sbjct: 938  --------------KNNEGATDEERARMEVVGEYHIGEFVNRFRHGSLVMRLPDSEIGQI 983

Query: 1112 ESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFP 1166
             +VI+GTV G +G ++A   ++   F   L+  +R+    + G  H  +RS         
Sbjct: 984  PTVIFGTVSGMIG-VIASLPQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAE 1042

Query: 1167 VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
             K  +DGDL E F  LS     +I+  +D    E+ K++EE+
Sbjct: 1043 AKSYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEEL 1084


>gi|195996153|ref|XP_002107945.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
 gi|190588721|gb|EDV28743.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
          Length = 1134

 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 286/1239 (23%), Positives = 519/1239 (41%), Gaps = 184/1239 (14%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y +T  +PT   A++ GNF+G     ++VA+   L++      G +  L+   ++G I S
Sbjct: 5    YVVTAHKPTAANASLFGNFTGPHDLNLIVAKNNRLDIQLVTAEGLVP-LLDVGVYGRIAS 63

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            +   R      D + + +   R+ IL+Y P +K++  + + +   +   R    G    V
Sbjct: 64   MQLIRPENENCDLLFILTCRYRVCILQYKPETKSIITRAYGDMKNRVS-RPSETGLIGIV 122

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISS-PLEAHKSHTIVYSICGIDCGFDNPIF 181
            DP  + + +   +    +  L  DT   ++     LE  +   + +       GF  P  
Sbjct: 123  DPDCKVICLKLYDGWLKLIPLELDTDKEMSAEDVRLEELQVLDVKFLY-----GFTEPTI 177

Query: 182  AAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRK-WS-EPVDNGANMLVTVPG 239
            A I           +GQ      + L  YE+ L    + R+ W+   V+  A M++ VP 
Sbjct: 178  ALIY---------ESGQ-----NRYLKTYEISLQNADIHRQPWNIGKVEEEAFMILPVPP 223

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF--- 296
               G   V++ A +   YK Q                     L ++ A+ + +   F   
Sbjct: 224  PSCGM--VVIGAGSISYYKGQDS-------------------LHITPASLKDRITCFGRV 262

Query: 297  ------FLLQTEYGDIFKVTL--EHDNE--HVSELKIKYFDTIPVTASMCVLKSGYLFAA 346
                  +LL    G +F + L  EH      V +L ++Y     + + +  L + + +  
Sbjct: 263  DSNGCRYLLGDYSGRLFMLILVQEHSQSGIKVKDLCLEYLGETSIPSCITYLDNAFAYIG 322

Query: 347  SEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIM 406
            S  G+  L   + +   PD E  S   +                     I+   +L PI+
Sbjct: 323  SSCGDSQL--IKVLNTSPDSETDSYIDV---------------------IDNFTNLGPII 359

Query: 407  DMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVW---TVKKN 463
            DM   +L ++   Q+ T  G G  +SLR+LR G+ + E+A   L  +   +W   TV ++
Sbjct: 360  DMVSVDLDKQGQSQLVTCSGFGKNASLRVLRNGIGIHELANIDLDHI-CGIWRLRTVSRS 418

Query: 464  VNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
            ++ E+D  +V+SF   +  L   G  VEE   SGF D   +   + +  D ++Q+    +
Sbjct: 419  IS-EYDDVLVLSFAGHSRFLKFDGREVEETDISGFDDYKETDFAANVAFDQIVQISNESV 477

Query: 523  RHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
            R    DGR  + EW+ P  +TI K  +   Q+++A SG EL Y E+   G+L +V    +
Sbjct: 478  RLAGCDGRGLLQEWKPPNGKTISKSTAGNTQIMVA-SGCELFYLEIG-EGELKQVSNISL 535

Query: 581  SGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFL 640
              D+AC+DI S+ +  +R++  AVG + +                   S        L L
Sbjct: 536  EHDIACIDI-SLKDDNERAQICAVGLWVD------------------MSARLLLLPNLQL 576

Query: 641  EVQASVGGEDGADHPASLFLN---------AGLQNGVLFRTVVDMVTGQLSDSRSRFLGL 691
             +  S+GG+     P S+ LN           + +G L   +V+  T  L++ +S  LG+
Sbjct: 577  MLTESLGGDI---IPRSIMLNRFDNEIYLLVAMGDGTLAYYLVNTTTCSLTNRKSVNLGV 633

Query: 692  RPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVS 751
                L++   G  + +   S RP + YI+  + + + ++ + + + + F S+     +  
Sbjct: 634  VHSNLYTFKSGSISNVFACSDRPTVIYINNHKLVFSNVNLKKVNFMSPFHSESFPNSLAL 693

Query: 752  VAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAK 811
            V  +   + TI+ + +    T  PL  T R    Q + +   II T +  + +E+ +   
Sbjct: 694  VNDSGFIIGTIDEIQKLHIRTK-PLGETTR----QEESQSFGII-TCRTEVPSEDDKNFV 747

Query: 812  KECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
                 A+ +  N     +Q +N       D LS+           K +  + ++D  S +
Sbjct: 748  PTHQSASLLVSNRTMCPEQSDNSSSTFDSDTLSE-----------KNIDSVLIIDQHSLD 796

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
              C L+LQD E   S+ +  F +        VGTA        +    G I I ++ E G
Sbjct: 797  AQCALQLQDCEWGMSLISCTFENDPEA-YYCVGTA--FVNLEDKEPTKGNIRILKYFE-G 852

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI- 990
            K ++ +H  +V G    +  F GRLLA +   + +Y+    + L   E   F N ++++ 
Sbjct: 853  K-IQQVHSKEVSGAVYCMVAFNGRLLASVNSTVSVYEWTSNKEL--VEETSFHNNVLALY 909

Query: 991  -NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGN 1049
              T  D I +GD+  S   C YR   N++ +   ++ P W+TA   ID D+  G +   N
Sbjct: 910  LKTKGDFILIGDLMRSISLCAYRPMNNEIELICKNNDPNWMTAVEIIDDDSYLGGENSHN 969

Query: 1050 IYFVRLPQDVSDEIEED-PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV- 1107
            ++  +     S+E ++  PT G                     +HVG+ V   ++ SLV 
Sbjct: 970  LFTCQKNSSSSEEEQKHLPTVGV--------------------YHVGEFVNVFRQGSLVM 1009

Query: 1108 ------PGGGE-SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY 1160
                  P   + S+++GTV G++G ++  +     +F S +   +      +   +H  +
Sbjct: 1010 QNTVDIPDSVQGSILFGTVSGAVGVVVTLAPA-MFEFVSAIANKLSTVVKGVGKIEHQFW 1068

Query: 1161 RS-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADEL 1194
            RS        P +  +DGDL E F  LS +  +++A+ L
Sbjct: 1069 RSFSNDRKTEPCQSFVDGDLVESFLDLSPEDMQRVANGL 1107


>gi|145351726|ref|XP_001420218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580451|gb|ABO98511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1120

 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 284/1246 (22%), Positives = 524/1246 (42%), Gaps = 188/1246 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y +T  +PT +  +  G F+ ++  +++VA+   LE+ R    G ++ ++   I G I +
Sbjct: 19   YVVTAHKPTVVTHSAVGKFTSSEATDLIVAKSTRLEVYRLHAEG-LKPVLDVPINGRIAT 77

Query: 64   LAQFRL-TGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGK---SGCRRIVPGQY 119
            ++  +  +G  K  + + ++     +L Y+ +    +++  E FG    +  R    GQ 
Sbjct: 78   MSLCQTGSGDGKARLYLTTERYGFTVLSYDEAN---EELKTEAFGDVQDNIGRPADDGQI 134

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
              VD   RA+ +   +    V   +     +   +  LE  +   I +       G   P
Sbjct: 135  GIVDDTCRAIGLRLYDGLFKVIPCDEKGGVKEAFNIRLEELRVEDIKFL-----HGTPKP 189

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNH-VSRKWSE-PVDNGANMLVTV 237
              A +  D  +A    T             YE+ +     VS  W++  ++ G+N ++ V
Sbjct: 190  TIAVLYRDTKDAVHIKT-------------YEIGIREKEFVSSPWAQNDLEGGSNKIIPV 236

Query: 238  PGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLP--AERGVLIVSAATHRQKTL 294
            P     P  GV+V  +  ++Y N+   D   V  +  ++P   +R  +    A     + 
Sbjct: 237  PA----PIGGVVVLGQEIIVYLNKFEDDAD-VFLKAINIPNIPDRTNITCYGAIDPDGSR 291

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
            +  LL    G ++ + + HD + V ELKI+      + +++  L +G +F  S +G+  L
Sbjct: 292  Y--LLGDADGMLYLLVILHDGKRVRELKIERLGDTSIASTLSYLDNGVVFVGSTYGDSQL 349

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
             +  A     D + +            P + Q         +E+  +L PI+D    +L 
Sbjct: 350  IKLHAEKTSIDKDGN------------PTYVQI--------LEEFTNLGPIVDFAFVDLE 389

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
                 Q+ T  G     SLR++R G+ + E AV QLPGV   +++++ + + + D Y+VV
Sbjct: 390  RHGQGQVVTCSGALKDGSLRVVRNGIGIDEQAVIQLPGV-KGLFSLRDSDDSQMDKYLVV 448

Query: 475  SFNNATLVLSI----GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR 530
            +F N T +L      G+T++E   +GF     +L    +  +  +QV   G+R +   G 
Sbjct: 449  TFINETRILGFVGDEGDTLDETEIAGFDAEAQTLCCGNMQGNVFLQVTHRGVRLVSRGGD 508

Query: 531  -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
             ++EW+      I+    N  Q+++A +GG+L    V   G+++ +       ++ACLD 
Sbjct: 509  LLDEWKPKDGAEILSAKCNPTQILVAAAGGQLHCLNV-AKGKIVLLASKTFENEIACLDC 567

Query: 590  ASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVG 647
              + +G   S   AVG +   I + S+     + +++ +S      P S L    +    
Sbjct: 568  TPMGDGMS-SPVCAVGLWSMDIVLASMSD---LSVITKESTDEDIIPRSTLLCSFE---- 619

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL--FSVVVGGRA 705
                 D P   +L  GL +G L   V+D  TG LS  +   LG +P  L  F       +
Sbjct: 620  -----DIP---YLFVGLGDGQLITYVLDQNTGALSGRKKLSLGTKPITLQTFKSHATNVS 671

Query: 706  AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
            ++   S RP + + +  + + + ++ + + +   FSS+   + +       L +  I+ +
Sbjct: 672  SVFAASDRPTVIFSNNKKLIYSNVNVQEVLHVCPFSSEAFPDALALAGDEDLTIGGIDDI 731

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
             +  +   +PL   PRR   Q        ++T+  A+  E                    
Sbjct: 732  -QKLHIRTIPLGGHPRRIAHQ--------VDTNTFAVAVEH------------------- 763

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
                 M  GD E                        IR++D  S +T     L+++E A 
Sbjct: 764  ----LMSKGDQE----------------------LFIRLIDDGSFDTLHQFRLEEHELAS 797

Query: 886  SICTVNFH-DKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG 944
            S+ + +F  D     ++  G A   +  P R    G I + R   E  +LEL+ + +V G
Sbjct: 798  SLMSCSFAGDSREYYVVGTGFAYEQEDEPSR----GRILVLRV--EADALELVSEKEVRG 851

Query: 945  IPLALCQFQGRLLAGIGPVLRLYDLGKK-----RLLRKCENKLFPNTIVSINTYRDRIYV 999
                L  F+G+LLAGI   L L+    +      L+ +C +     T  S+ T  D I V
Sbjct: 852  AVYNLNAFKGKLLAGINSKLELFKWTPREDDAHELVSECSHHGQIITF-SVKTRGDWILV 910

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD-TMAGADKFGNIYFV-RLPQ 1057
            GD+ +S    +Y+ +E  +   A D    W+TA   +D D T  GA+   N++ V R   
Sbjct: 911  GDLLKSMSLLQYKPEEGAIDEIARDFNANWMTAVAMLDDDETYLGAENSLNLFTVARNMN 970

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPG--GGES-- 1113
             ++DE                     +++E   ++H+G+ V      SLV     G+S  
Sbjct: 971  AMTDE-------------------ERSRLEITGEYHLGEFVNVFSPGSLVMSLKDGDSLE 1011

Query: 1114 ---VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF----- 1165
               +++GT  G +G +LA   +D  DF   L+  M +    + G  H  +RS        
Sbjct: 1012 VPTLLFGTGNGVIG-VLASLPKDAYDFAERLQTSMNKHIQGVGGLKHAEWRSFRHTLRRK 1070

Query: 1166 --PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
              P ++ +DGDL E F  L ++    +A ++     EI++++EE++
Sbjct: 1071 SDPSRNFVDGDLVESFLDLKVEQADVVAADMKCDRAEIIRRVEELQ 1116


>gi|357623954|gb|EHJ74904.1| putative DNA repair protein xp-e [Danaus plexippus]
          Length = 1128

 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 297/1221 (24%), Positives = 503/1221 (41%), Gaps = 161/1221 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFG 59
            Y Y +T Q+PT +I+ I GNF+      ++VA+   LE  L+ PE    +  +    ++G
Sbjct: 3    YHYVVTAQKPTAVISCITGNFTSPTDLNLLVAKVSRLEMYLVTPEG---LRPMKEVGLYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP--- 116
             +  +  FR    QKD + + +     +ILE+    N   ++     G    R   P   
Sbjct: 60   RVAKMKLFRPPYEQKDLVFILTARYNAMILEWRTGANGELEVVTRAHGNVADRIGKPSEN 119

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            G    +DP+ R + +   +    +  L++D+      S  LE    + + +       G 
Sbjct: 120  GILAVIDPQARVIGLRLYDGLFKIIPLDKDSTELKAASLRLEELNVYDLEFL-----HGC 174

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLV 235
             NP    I        QD  G+     + NL   E       +   W +  V+  A++L+
Sbjct: 175  SNPTLILIH-------QDLNGRHIKTHEINLRDKEF------MKIPWKQDNVETEASILI 221

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLF 295
             VP    G   +++  E+ V +  Q +    AV P +   P       ++          
Sbjct: 222  PVPSPLGG--AIVIGQESIVYHDGQSYV---AVAPPQIKTP-------INCYCRVDVRGL 269

Query: 296  FFLLQTEYGDIFKVTLE----HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
             +LL    G +F + LE         V +LK++    IP+   M  L +G +F  S  G+
Sbjct: 270  RYLLGDIAGRLFMLLLELSERDGTASVRDLKVELLGDIPIPECMTYLDNGVVFVGSRLGD 329

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
             AL +  A+  D    AS              + QP        +E   SL PI+DM + 
Sbjct: 330  SALVRLAAVRDD----ASQ-------------YVQP--------METFTSLAPIVDMCVV 364

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +        D  
Sbjct: 365  DLERQGQNQLITCSGAFKMGSLRIIRNGIGIQEQASIDLPGI-KGMWALTLGQGPHHDT- 422

Query: 472  IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI-REDG 529
            +V+SF   T VL++ GE VEE    GF+    +     +  D L+QV   GIR I R  G
Sbjct: 423  LVLSFVGQTRVLTLNGEEVEETEIKGFVSDRQTFFTGNVCHDQLIQVTDEGIRLIGRGPG 482

Query: 530  RIN---EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVAC 586
              N    W  P  R +  V     + V A   G  IY      G L  + +  M+ +VAC
Sbjct: 483  GWNGVAAW-APAGRAVSVVSCGETRAVAA--AGLRIYLVAIKQGALELISEVCMNEEVAC 539

Query: 587  LDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQ 643
            LD+   P G +    L VG + D ++R+L L PD  ++ L  + +S    P SLL   ++
Sbjct: 540  LDLG--PGGEE--ALLGVGLWTDISVRVLKL-PD--LRPLHTEKLSGEIIPRSLLICVLE 592

Query: 644  ASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG 703
                           +L   L +G +F   VD  +G L++ +   LG +P  L S     
Sbjct: 593  GVC------------YLLCALGDGSMFYFTVDPDSGVLTNKKKVTLGTQPTVLRSFRSLS 640

Query: 704  RAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIE 763
               +   S RP + +    + + + ++ + + +  S ++    + +     + + + TI+
Sbjct: 641  TTNIFACSDRPTVIFSSNHKLVFSNVNLKEVAHMCSLNAVAYPDSLALATDSTVTIGTID 700

Query: 764  RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGEN 823
             + +  +   +PL  TPRR   Q   +   +I               + +  E  G    
Sbjct: 701  EI-QKLHIRTVPLGETPRRIAYQEASQTFGVI-------------TMRVDKVEWTG---- 742

Query: 824  GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEA 883
            G G++ +             +      P A  D  +  + +LD  +       +L  NE 
Sbjct: 743  GCGSLVRPSASTAAASASAAAPPSKHAP-APLDLELHNLLILDHHTFEVLHAHQLLANEF 801

Query: 884  AFSICTVNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            A S+ +    D +     AVGTA     +  PK+    G I ++ +  EGK  ++  K +
Sbjct: 802  AMSLVSCKLAD-DPNHYYAVGTAILNPEESEPKQ----GRILLFHWC-EGKLTQVAEK-E 854

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVG 1000
            ++G    L +F G+LLA I   +RL++   ++ LR  E   F N + + +    D I VG
Sbjct: 855  IKGGCYTLVEFNGKLLASINSTVRLFEWTSEKELR-LECSHFNNIVALYLKVKGDFILVG 913

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVS 1060
            D+  S    +Y++ E      A D  P W+TA   +D DT  GA+   N++  +  +D +
Sbjct: 914  DLMRSMSLLQYKQMEGSFEEIARDYSPNWMTAVEILDDDTFLGAENSFNLFVCQ--KDSA 971

Query: 1061 DEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES------- 1113
               +E+                  +M  + QFHVGD+V  +++ +LV    ++       
Sbjct: 972  ATTDEE----------------RQQMGYMGQFHVGDMVNVMRRGALVAQLADTAAPVARP 1015

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVK 1168
            V+  TV G++  ++   S++  DF   LE  +      +    H  +RS        P +
Sbjct: 1016 VLLATVSGAICLVVQL-SQELFDFLHQLEERLTHTIKSVGKIPHSFWRSFNTDIKTEPAE 1074

Query: 1169 DVIDGDLCEQFPTLSLDLQRK 1189
              IDGDL E F  LS D+Q++
Sbjct: 1075 GFIDGDLIESFLDLSRDMQQE 1095


>gi|385865228|gb|AFI92852.1| DNA damage-binding protein 1 [Danio rerio]
          Length = 1140

 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 286/1237 (23%), Positives = 503/1237 (40%), Gaps = 169/1237 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT + A I G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYAVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S +  D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGDSIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  VDP+ R + +   +    V  L+R+       +  LE  +   + +       G
Sbjct: 122  G----IVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVQFLY-----G 172

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
               P    I        QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 173  CQAPTVCFIY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IPVP---EPFGGAIIIGQESITYHNGDKYLAVAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      V L+       +L ++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEELMDGAVVLK-------DLHVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S   +MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNDQGSYVGVMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++   +
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSESS 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             + D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+    +R 
Sbjct: 419  RDTDDMLVLSFVGQTRVLMLSGEEVEETELQGFVDNQQTFFCGNVAHQQLIQITSVSVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + +D +  ++EW+ P  R I     N  QVV+A+  G ++Y+   ++G+L ++   EM  
Sbjct: 479  VTQDSKALVSEWKEPQGRNISVASCNNTQVVLAV--GRVLYYLQILSGELKQISSTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLF 639
            +VACLDI  + E    S   AVG + D + R+L L    C   L  + +     P S+L 
Sbjct: 537  EVACLDITPLGERTADSCICAVGLWTDISARLLKL---PCFTPLHKEMLGGEIIPRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               + S        H    +L   L +G LF   +D+ TG LS+ +   LG +P  L + 
Sbjct: 594  TTFEGS--------H----YLLCALGDGALFYFGLDIQTGVLSERKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                 + +   S RP + Y    + + + ++ + + Y    +S+   + +     + L +
Sbjct: 642  RSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +P+R   Q   +   ++ +     D    TA  R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPKRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSASTQA 760

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
              ++                   +K  P S   +     E  + V  + V+D  +     
Sbjct: 761  LSSSVS----------------SSKLFPSSTSPHETSFGEEVE-VHSLLVVDQHTFEVLH 803

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
              +   NE A S+ +     ++      VGTA  + +  +     G I ++ +  +GK L
Sbjct: 804  AHQFLQNEYALSMVSCKL-GRDPAVYFIVGTA--MVYPEEAEPKQGRIIVFHYT-DGK-L 858

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
            + + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  
Sbjct: 859  QTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKG 918

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++  +
Sbjct: 919  DFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ 978

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV------- 1107
              +D +   +E+                   ++E+  FH+G+ V      SLV       
Sbjct: 979  --KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFSHGSLVLQNLGES 1020

Query: 1108 --PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF 1165
              P  G SV++GTV G +G + +  S         L+  + +    +   +H  +RS + 
Sbjct: 1021 STPTQG-SVLFGTVNGMIGLVTSL-SEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHT 1078

Query: 1166 PVKD-----VIDGDLCEQFPTLSLDLQRKIADELDRT 1197
              K       IDGDL E F    LDL R    E+  T
Sbjct: 1079 ERKTEQATGFIDGDLIESF----LDLGRAKMQEVVST 1111


>gi|223647932|gb|ACN10724.1| DNA damage-binding protein 1 [Salmo salar]
          Length = 1139

 Score =  223 bits (568), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 290/1235 (23%), Positives = 502/1235 (40%), Gaps = 166/1235 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT + A I G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYN---PSKNVFDKIHQETFGKSGCRRIVPGQ 118
              +  FR  G  KD + + +      ILEY     S ++  + H     + G R    G 
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQNGESIDIITRAHGNVQDRIG-RPSETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTI-VYSICGIDCGFD 177
               VDP+ R  MIG      L  V+  D   R   +  +   +   I V+ + G      
Sbjct: 121  IGIVDPECR--MIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQA--- 175

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVT 236
             P    I        QD  G+     + +L   E + G       W  E V+  A+M++ 
Sbjct: 176  -PTVCFIY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAA 287
            VP   +   G ++  +  + Y N         P ++    V   R D    R +L     
Sbjct: 222  VP---EPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLL----- 273

Query: 288  THRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
               +  LF  LL+ E      V L+       +L+++      +   +  L +G +F  S
Sbjct: 274  GDMEGRLFMLLLEKEELMDGAVVLK-------DLRVELLGETSIAECLTYLDNGVVFVGS 326

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
              G+  L +   +  D +   S   +MET                        +L PI+D
Sbjct: 327  RLGDSQLVK---LNVDSNDSGSYVAVMET----------------------FTNLGPIVD 361

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
            M + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++     E
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSEAGRE 420

Query: 468  FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
             D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+   G+R + 
Sbjct: 421  TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNLQTFYCGNVAHQQLIQITSGGVRLVM 480

Query: 527  EDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV 584
            +D +  ++EW+ P  R I     N  QVV+A+  G  +Y+   ++G+L ++   EM  +V
Sbjct: 481  QDSKALVSEWKEPQGRNISVAACNSSQVVLAV--GRALYYLQILSGELKQISTVEMEHEV 538

Query: 585  ACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLE 641
            ACLDI  + E    S   AVG + D + R+L L    C   L  + +     P S+L   
Sbjct: 539  ACLDITPLGEDGD-SPLCAVGLWTDISARVLKL---PCFTALHKEMLGGEIIPRSILMTT 594

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
             +            AS +L   L +G LF   +D+ +G LS+ +   LG +P  L +   
Sbjct: 595  FE------------ASYYLLCALGDGALFYFGLDLTSGVLSERKKVTLGTQPTVLRTFRS 642

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
               + +   S RP + Y    + + + ++ + + Y    +S+   + +     + L + T
Sbjct: 643  LSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGT 702

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFE 816
            I+ + +  +   +PL  +PRR   Q   +   ++ +     D    TA  R +A  +   
Sbjct: 703  IDEI-QKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSASTQALS 761

Query: 817  AAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLL 876
            ++                   +K  P S   +     E  + V  + V+D  +       
Sbjct: 762  SSVS----------------SSKLFPSSTSPHETSFGEEVE-VHSLLVVDQHTFEVLHAH 804

Query: 877  ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLEL 936
            +   +E A S+ +     ++      VGTA  + +  +     G I ++ +  +GK L+ 
Sbjct: 805  QFLQSEYALSMVSCRL-GRDLSVYFIVGTA--MVYPEEAEPKQGRIIVFHYT-DGK-LQT 859

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDR 996
            + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  D 
Sbjct: 860  VAEKEVKGAVYSMMEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKGDF 919

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++  +  
Sbjct: 920  ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ-- 977

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV--------- 1107
            +D +   +E+                   ++E+  FH+G+ V      SLV         
Sbjct: 978  KDSAATTDEE----------------RQHLQEVGVFHLGEFVNVFSHGSLVLQNLGESST 1021

Query: 1108 PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPV 1167
            P  G SV++GTV G +G + +  S         L+  + +    +   +H  +RS +   
Sbjct: 1022 PTQG-SVLFGTVNGMIGLVTSL-SEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTER 1079

Query: 1168 KD-----VIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            K       IDGDL E F    LDL R    E+  T
Sbjct: 1080 KTEQATGFIDGDLIESF----LDLGRAKMQEVVST 1110


>gi|198432469|ref|XP_002129207.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
            DNA-binding protein 1) (UV-damaged DNA-binding factor)
            (DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
            (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
            pigmentosum group E-co... isoform 1 [Ciona intestinalis]
          Length = 1150

 Score =  223 bits (568), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 290/1239 (23%), Positives = 510/1239 (41%), Gaps = 172/1239 (13%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y +T  +PT +   I GNF+      +++++   LEL      G +  +    I+G I  
Sbjct: 5    YIVTAHKPTAVKQCITGNFTSGSDLNLLISKNTRLELFTVTPEG-LRPVKEINIYGRIAV 63

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET--FGKSGCRRIVPGQYLA 121
            L  FR  G  +D + + ++     IL+Y  +    + I + +     +  R    G    
Sbjct: 64   LKFFRPEGEDRDLLFILTERYHGCILQYKATDGGCEIITKASGDLSDTVGRPPETGIIGI 123

Query: 122  VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC----GFD 177
            +DP  +  +IG    + +   L  D  +        E    +  +  +  ID     G+ 
Sbjct: 124  IDPTSK--LIGLRLYEGVFKFLPYDPTSE-------ELRPFNIRIEELSVIDAKFLHGYT 174

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVT 236
             P    I        Q+S G+       ++   E+      V+  W  E +D  AN ++ 
Sbjct: 175  TPTLVIIY-------QNSQGRHVKTYIVDVRDKEV------VAGPWKQENIDAEANFIIN 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP      +G ++  +  + Y N G   +    P+  D         ++      K    
Sbjct: 222  VP---KPLAGSIIIGQESITYHN-GDKYIPIAPPQIKD--------TINCYAPVDKDGSR 269

Query: 297  FLLQTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            +LL    G +F + LE D        V +LKI+    + +  ++  L +G ++  S  G+
Sbjct: 270  YLLGDLAGHLFILLLESDEMMDGTNTVRDLKIELLGEVSIPEAISYLDNGVVYIGSRLGD 329

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI-EQVESLMPIMDMRI 410
              L +   +  D  +E                    R   +L+ + +   +L PI+DM +
Sbjct: 330  SQLIR---LPTDSSMEG-------------------RPKPSLISVLDTYTNLGPIIDMCV 367

Query: 411  ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA 470
             +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++  V D   +
Sbjct: 368  VDLDRQGQGQVVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGI-KGLWPLR--VFDTSRS 424

Query: 471  Y--IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
            Y  +V+SF   + +L + GE VEE    GF D + +   S +  + L+Q+    IR I  
Sbjct: 425  YDTLVISFVGHSRILQLSGEEVEETDLPGFDDESQTFYCSNVCHNQLVQITEKSIRLISH 484

Query: 528  DGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVA 585
              R  ++EW+    R I     N+ QV++A+ G  L YFE+   G+++E    ++  +VA
Sbjct: 485  TERRQVHEWKPKNDRHISVATCNKSQVLLAI-GSSLHYFEI-QPGEVIERACVDLPHEVA 542

Query: 586  CLDI---ASVPEGRKRSRFL-----AVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPP 634
            CL I    S P   +   F+     AVG + DNT R+L L   + M  Q L+ + +   P
Sbjct: 543  CLTIEPLVSDPSELEGPDFVTASICAVGLWNDNTARVLKLPTLEEMHQQKLADEII---P 599

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             S+L ++        DG +     +L   L +G LF   ++  TG +SD +   LG +P 
Sbjct: 600  RSILLVQF-------DGIN-----YLLVTLGDGTLFYFTLNPETGYISDRKKVPLGTQPT 647

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             L     GG   +   S RP + Y    + + + ++ + + +     SD   + +     
Sbjct: 648  SLSVFTSGGSRTVFACSDRPTVVYSSNKKLVFSNVNLKEVSHMCPLDSDGYPDSLALAND 707

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKL--MVIIETDQGALTAEEREAAKK 812
            N L + TI+ + +  +   +PL  +PRR   Q + +   +V + TD    T ++ +  + 
Sbjct: 708  NTLLIGTIDEI-QKLHIRTVPLYESPRRIAYQEESQCFGLVTLRTDSVDATGDKMKITRP 766

Query: 813  ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT 872
                 A +                  K  P+         A +D  +  + ++D  +   
Sbjct: 767  SASTQASVC----------------TKSPPVDGRSVEGFSATAD--IGSLLIIDQHTFEV 808

Query: 873  TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK 932
                +L  NE   SI +      +  +   VGTA    +  +     G I ++ +++   
Sbjct: 809  HHAYQLDTNEEPLSIMSCKL-GSDPNSYFVVGTA--FVYMEETEPKHGRILVFHYID--N 863

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR-KCENKLFPNTI-VSI 990
             L L+ + +V+G    LCQF G +LA I   + +Y    ++ LR +C N+   N + + +
Sbjct: 864  KLTLVAEKEVKGAVFCLCQFNGHVLAAINTSVSIYQWTTEKELRAECSNQ--SNILALYL 921

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
                D + VGD+  S     Y+  E  L   A D  P W+TA   +D D   GA+ F N+
Sbjct: 922  KCKGDFVLVGDLMRSMSILNYKHVEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFYNV 981

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG 1110
            +           I +  +G     E+ KL        E   FHVGD + + +  SLV   
Sbjct: 982  F-----------ICQKDSGATTDEERSKL-------REAALFHVGDSINTFRHGSLVMQN 1023

Query: 1111 -GES-------VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
             GE+       +++GTV GS+G +      D   F   ++  + +    +   DH ++RS
Sbjct: 1024 VGETAVSSKGHILFGTVHGSIGVITTV-DEDLYAFLHSIQNRLAKVIKSVGNIDHESWRS 1082

Query: 1163 AYFPVKD-----VIDGDLCEQFPTLSLDLQRKIADELDR 1196
                 K       +DGDL E F    LDL R+   E+ +
Sbjct: 1083 FCTNEKTEAHRGFVDGDLIECF----LDLNREKMAEVAK 1117


>gi|405970039|gb|EKC34976.1| DNA damage-binding protein 1 [Crassostrea gigas]
          Length = 1160

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 297/1257 (23%), Positives = 510/1257 (40%), Gaps = 175/1257 (13%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT + A + GNF+      +++AR   +E+  + PE    +  +    ++G I
Sbjct: 5    YVVTAHKPTAVNACVTGNFTSPDDLNLIIARNTRMEIYVVTPEG---LRPVKEVGVYGRI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKI---HQETFGKSGCRRIVPGQ 118
              +  FR  G  KD + + +     +ILE N +    D I   H     K G R    G 
Sbjct: 62   AVMELFRPPGESKDLMFLLTQRYNAMILECNQNGENIDIITRAHGNVQDKIG-RASETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA---------HKSHT---IV 166
               +DP  R + +   +    V  L RD       +  LE          H   T   I+
Sbjct: 121  IGIIDPLCRVIGLRLYDGLFKVIPLERDNKELKAFNIRLEELTVIDIQFLHGCTTPTLIL 180

Query: 167  YSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP 226
                 ++C     +     L +    QD  G+     + +L   E   G       W + 
Sbjct: 181  IHQANLNCYHLMTLCITNLLSFK---QDQHGRHVKTYEISLRDKEFQKG------PWKQD 231

Query: 227  -VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVS 285
             V+  A ML+ VP    G   +++  E+   +K      +     +++ L     V    
Sbjct: 232  NVETEACMLIAVPEPFGG--ALIIGQESITYHKGDNFIPIAPPAIKQSTLTCYGKV---D 286

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKS 340
            A   R      +LL    G +F + LE + +      V +LK++      +   +  L +
Sbjct: 287  ANGSR------YLLGDMMGRLFMLMLEKEEKMDSTVTVKDLKVELLGETTIAECITYLDN 340

Query: 341  GYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVE 400
              ++  S  G+  L +   +  +PD   S              + Q         +E+  
Sbjct: 341  AVVYIGSRLGDSQLVK---LNVEPDENGS--------------YVQ--------EMERFT 375

Query: 401  SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
            +L PI+DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W++
Sbjct: 376  NLGPILDMCVVDLERQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGI-KGIWSL 434

Query: 461  KKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP 519
            + N + E+D  IV+SF   T VL + GE VEE   SG      +   + +  + L+Q+ P
Sbjct: 435  RVN-SPEYDNMIVLSFVGQTRVLMLNGEEVEETELSGIESDQQTFLCANVVHNQLLQITP 493

Query: 520  SGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEK 577
              +R I  D +  + EW+  G + I    SN  QVV A  G EL Y E+ + G + +V  
Sbjct: 494  QSVRLISCDNQKLLKEWKHSGGKNISLASSNTCQVV-ACVGSELYYLEL-LQGDIKQVST 551

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--P 634
              M  +VAC+D+  + EG ++S   A+G + D + R+LSL PD     L V+ +     P
Sbjct: 552  STMEHEVACVDLTPLREGEEKSHLCAIGLWTDISARVLSL-PD--FNSLHVEMLGGEIIP 608

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             S+L    +               +L   L +G LF    ++ TG  ++ R   LG +P 
Sbjct: 609  RSILMTTFEGI------------HYLLCALGDGSLFYFNFNIDTGYFTEKRKVTLGTQPT 656

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             L +        +   S RP + Y    + + + ++ + + +    +S+   + +     
Sbjct: 657  VLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALAND 716

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREA 809
              L + TI+ + +  +   +PL  +PRR   Q   +   +I       D   L      A
Sbjct: 717  GTLTIGTIDEI-QKLHIRTIPLGESPRRIAYQESSQTFGVISMRMDLQDSNGLNPTRPSA 775

Query: 810  AKKECFEAA---GMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLD 866
            +      ++   G    G   M +   GD+   +  L  +Q+ +    S           
Sbjct: 776  STHAAMMSSSSSGKVTMGTSTMGEHSAGDEVEVHSLLIIDQHTFEVLHSH---------- 825

Query: 867  PRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHI 924
                      +L  NE A S+ +     ++      VGTA     +  PK+    G I I
Sbjct: 826  ----------QLMPNEFATSLISARL-GEDPCNYYIVGTALVHPEEAEPKQ----GRIVI 870

Query: 925  YRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR-KCENKLF 983
            + F  EGK L  + + +++G    L +F G+LLA I   +RL++    + LR +C    +
Sbjct: 871  FHF-HEGK-LNQIAEKEIKGAAYTLVEFNGKLLASINSTVRLFEWTTDKELRLECN---Y 925

Query: 984  PNTIVS--INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTM 1041
             N+IV+  + T  D I VGD+  S     Y+  E      A D  P W TA   +D D  
Sbjct: 926  FNSIVALYLKTKGDFILVGDLMRSITLLLYKPMEGTFEEIARDCNPNWTTAVEILDDDNF 985

Query: 1042 AGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSL 1101
             GA+   N++  +  +D +   +ED                   ++E+  FH+G+ V   
Sbjct: 986  LGAENSFNLFTCQ--KDSASTTDED----------------RQNLQEVGMFHLGEFVNVF 1027

Query: 1102 QKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPL 1152
            +  SLV         P  G SV+YGTV G++G ++    ++   F   ++  + +    +
Sbjct: 1028 RHGSLVMQHSGETSTPTQG-SVLYGTVNGAVG-LVTQVPQEFYSFLQDIQSRLAKVIKSV 1085

Query: 1153 CGRDHMAYRSAYFPVKD-----VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
               +H  +RS +   K       IDGDL E F  L+ D  ++    L    G  +K+
Sbjct: 1086 GKIEHSFWRSFHTERKTEACEGFIDGDLIESFLDLNRDKMQETVKGLQIDDGSGMKR 1142


>gi|345498295|ref|XP_001607743.2| PREDICTED: DNA damage-binding protein 1-like [Nasonia vitripennis]
          Length = 1140

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 288/1235 (23%), Positives = 511/1235 (41%), Gaps = 154/1235 (12%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT + A + GNF+      +++A+   LE  L+ PE    +  L    I+G I
Sbjct: 8    YVVTAHKPTAVTACVTGNFTSPTDLNLILAKNMRLEIYLVTPEG---LRPLKEVGIYGKI 64

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              +  FR    +KD + + +     +ILE         +  K H     + G +    G 
Sbjct: 65   AVVKFFRPQHEKKDLLFLLTTRYNAMILECVGEGEDIEIITKAHGNVADRIG-KASETGI 123

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DPK R + +   +    +  L++D       S  ++      + +       G  N
Sbjct: 124  KAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQNVQDVNFL-----HGCTN 178

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTV 237
            P    I        QD  G+     + +L   E       V   W  + V+  A M++ V
Sbjct: 179  PTLILIH-------QDINGRHVKTHEISLRDKEF------VKIPWRQDNVEREAMMVIPV 225

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
            P       G ++  +  ++Y + G   V  V P       ++  +   A    Q     +
Sbjct: 226  PSP---ICGAIIIGQESILYHD-GTTYVTVVPP-----IIKQSTISCYAKVDNQG--LRY 274

Query: 298  LLQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            LL    G +F + LE D +      + +LK++    + +   +  L +G +F  S  G+ 
Sbjct: 275  LLGDLAGHLFMLFLEQDKKADGSMVIKDLKVELLGEVSIPECITYLDNGVIFIGSRLGDS 334

Query: 353  ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
             L +   +   PD   S  + MET                        +L PI+DM + +
Sbjct: 335  QLIK---LNTKPDENGSYCSTMET----------------------FTNLAPIVDMAVVD 369

Query: 413  LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK-KNVNDEFDAY 471
            L  +   QI T  G     SLRI+R G+ + E A   LPG+   +W +K  +VN  FD  
Sbjct: 370  LERQGQGQIVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGI-KGMWALKVDSVN--FDNT 426

Query: 472  IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI--RED 528
            +V+SF   T +L + GE VEE    GF+    +     + +D ++Q+ P+  R I  +  
Sbjct: 427  LVLSFVGQTRILMLNGEEVEETEIPGFVADEQTFHTGNVTNDVIIQITPTSARLISNKSS 486

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
              I+EW    KRTI  V  N  QV+ A +G +L Y E++   Q++      +  +VAC+D
Sbjct: 487  SVISEWEPDNKRTISVVACNGTQVLCA-TGNDLFYLEIN-DNQIVSKGYTTLQHEVACVD 544

Query: 589  IASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQAS 645
            I+ + +G   ++ +AVG + D ++RIL+L   + +  ++L  + +   P S+L    + +
Sbjct: 545  ISPL-DGSSEAKIVAVGLWTDISVRILTLPKLEEINKELLGGEII---PRSILMTCFEGN 600

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
                         +L   L +G ++   ++   G L+D +   LG +P  L +       
Sbjct: 601  T------------YLLCALGDGSMYYFTLNKQNGMLADKKKVTLGTQPTVLRTFRSLSTT 648

Query: 706  AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
             +   S RP + Y    + + + ++ + + +  S +++   + +     N + + TI+ +
Sbjct: 649  NVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYSDSLALATDNTVTIGTIDEI 708

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
             +    T +PL  +PRR   Q   +   +I        +     A+      A    N N
Sbjct: 709  QKLHIRT-VPLYESPRRIAYQESTQTFGVITMRVDIQESNGVNIARPSASTQAASISNSN 767

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
                   +    NK    + E         +  +  + ++D  +        L   E A 
Sbjct: 768  -------HIPTHNKPSNTASE------IGQEVEIHNLLIVDQHTFEVLHAHTLVPTEYAM 814

Query: 886  SICTVNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVE 943
            S+ +     ++      VGTA     +  PK    +G I +Y +  +GK  ++  K +++
Sbjct: 815  SLISTKL-GEDPTPYYIVGTAMINPDESEPK----SGRILLYHW-NDGKLTQVAEK-EIK 867

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGDI 1002
            G   +L +F G+LLA I   +RL++   ++ LR  E   F N I + + T  D + VGD+
Sbjct: 868  GSCYSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFVLVGDL 926

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
              S    +Y+  E      A D  P W+T+   +D DT  GA+   N++  +     + E
Sbjct: 927  MRSVTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFVCQKDSAATSE 986

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG-GES-------V 1114
             E                    +M+E+ QFH+GD+V   +  SLV    GES       V
Sbjct: 987  EER------------------QQMQEVGQFHLGDMVNVFRHGSLVMQHLGESSTPTHGCV 1028

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK-----D 1169
            ++GTV G++G +    S    +F  +LE  +      +   +H  +RS    +K      
Sbjct: 1029 LFGTVCGAIGLVTQIPST-FYEFLRNLEDRLTSVIKSVGKIEHNFWRSFNTDLKIEQCEG 1087

Query: 1170 VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             IDGDL E F  LS +   ++A  +    G  +KK
Sbjct: 1088 FIDGDLIESFLDLSHEKMAEVAMGIVIDDGSGMKK 1122


>gi|156389050|ref|XP_001634805.1| predicted protein [Nematostella vectensis]
 gi|156221892|gb|EDO42742.1| predicted protein [Nematostella vectensis]
          Length = 1157

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 283/1235 (22%), Positives = 505/1235 (40%), Gaps = 157/1235 (12%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT + AA+ GNF+G     +V+A+   LE  L+ PE    +  ++   ++G++
Sbjct: 5    YVVTAQKPTAVNAAVVGNFTGPDDLNLVIAKNTRLEIHLVTPEG---LRPMLDVGLYGSV 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEY-NPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
              +  FR     +D + + +   R+ IL Y   + ++  +   +   + G R    GQ  
Sbjct: 62   GVMELFRPPNEPQDLLFILTAKYRVCILGYRKETGDIVTRACGDVQDRIG-RPSDTGQIG 120

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
             +DP  R + +   +    V  L  D+   L   + +   + H +         G  NP 
Sbjct: 121  IIDPSCRVIGLRLYDGLFKVIPLELDSDKELKAFN-IRLEELHVVDIQFL---YGCANPT 176

Query: 181  FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTVPG 239
               I        QD  G+     + NL  +E   G       W +  V+  A  ++ VP 
Sbjct: 177  IVFIY-------QDPHGRHVKTYEINLRDHEFAKG------PWKQDNVEVEACRVIAVPN 223

Query: 240  GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
               G   +++  E+   +K   +  +     +++ L     +      T+  +    +LL
Sbjct: 224  PLGG--ALIIGQESITYHKGSNYHAIAPPALKQSSLTCHGKI-----DTNGSR----YLL 272

Query: 300  QTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
                G ++ + LE          V +LK++      +   +  L +G +F  S  G+   
Sbjct: 273  GDMNGRLYMLLLERQELIDGTYEVKDLKLEMLGETSIAHCLVYLDNGVVFIGSMLGDS-- 330

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
             Q   +  +PD + S   +MET                        +L PI+DM + +L 
Sbjct: 331  -QLAKLSTEPDADGSYVQVMET----------------------FTNLGPIVDMVVVDLE 367

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK-KNVNDEFDAYIV 473
             +   Q+ T  G     SLRI+R G+ + E A   L G+   +W +K +    E+D  +V
Sbjct: 368  RQGQGQLVTCSGAKKEGSLRIIRNGIGIHEHATIDLAGI-MGIWALKLRKTQQEYDDTLV 426

Query: 474  VSFNNA---------TLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
            +SF            + VLS+ GE VEE    GF D   +     +    L+QV  + +R
Sbjct: 427  LSFVGQSRRVLCTIHSRVLSLSGEEVEETEIPGFSDDQQTYYSGNVTGAQLIQVTAASVR 486

Query: 524  HIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMS 581
             +  + R  ++EW+ P  + I     N  QVV A+ G EL Y E+ M G+L ++ +  + 
Sbjct: 487  LVNCETRQLVSEWKHPSAKNISVASCNTEQVVAAV-GSELYYIEI-MPGELRQISQVTLE 544

Query: 582  GDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLL 638
             +VACLDI    EG+ R+  +AVG + D ++R+L L     +  L VQ +     P S+L
Sbjct: 545  YEVACLDITPTVEGKSRADMVAVGLWTDISVRVLQLPK---LNQLHVQMLGGEIIPRSIL 601

Query: 639  FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
                +               +L   L +G LF   +D  TG L++ +   LG +P  L +
Sbjct: 602  KTAFE------------GIHYLLCALGDGTLFYFTMDPSTGALAECKKVTLGTQPTMLRT 649

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
                    +   S RP + Y    + + + ++ + + +    +S    + +      +L 
Sbjct: 650  FKSLSTVNVFACSDRPTVIYSSNHKLVFSNVNLKEVNFMCPLNSQGYPDSLALANDGSLT 709

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAA 818
            + TI+ + +  +   +PL  +PRR   Q   +   +I     ++  E  E          
Sbjct: 710  IGTIDEI-QKLHIRTVPLGESPRRIAYQEATQTFGVI-----SVRIEISEPGTSGTVPLH 763

Query: 819  GMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLEL 878
                    N+               + +   +     +  +  + ++D  +   T   +L
Sbjct: 764  PSASTTAHNVSSSVGTGVSGSASSSAPDGITFG---DEMEIGSLLIIDQHTFEVTHAHQL 820

Query: 879  QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
             DNE A S+ +    D  H T   VGTA      P+    AG + ++  + EGK +++  
Sbjct: 821  HDNEQATSLMSCTLSDDPH-TYYCVGTAYVFPEEPEPK--AGRLLLFH-LSEGKLVQVAE 876

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRI 997
            K +V+G   +L +F G++LAGI   + +++    +  R  E   + N + + + T  D I
Sbjct: 877  K-EVKGAVYSLVEFNGKVLAGINSTVSIFEWTADKEFRY-ECSYYDNILALYLKTKGDFI 934

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             VGD+  S     Y   E      A D  P+W+TA   +D DT  GA+   N++      
Sbjct: 935  LVGDLMRSMTLLVYLPLEGSFQEIAHDFSPKWMTAIEILDDDTFLGAENSYNLFTCT--- 991

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---PGGGES- 1113
                      +G     E+  L  A        Q+H+G+ V   +  SLV   PG   + 
Sbjct: 992  --------KDSGATTDEERYHLQDAG-------QYHLGEFVNVFRHGSLVMEHPGDASTP 1036

Query: 1114 ----VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDH----------MA 1159
                V++GTV G +G ++A  ++D  +F   ++  + +    +   DH          ++
Sbjct: 1037 FQGCVLFGTVNGRIG-IVAQIAQDLFNFLIQVQKKLNKVIKSVGKIDHSLYPFPHCSNLS 1095

Query: 1160 YRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADEL 1194
            +     P    IDGDL E F    LDL R   +E+
Sbjct: 1096 HSRKMEPAHGFIDGDLIESF----LDLPRARMEEV 1126


>gi|157128866|ref|XP_001655232.1| DNA repair protein xp-e [Aedes aegypti]
 gi|108882187|gb|EAT46412.1| AAEL002407-PA [Aedes aegypti]
          Length = 980

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 256/1073 (23%), Positives = 452/1073 (42%), Gaps = 128/1073 (11%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T Q+PT + A + GNF+ T    ++VA+   LE  L+ PE    I+ +    I G I
Sbjct: 5    YIVTAQKPTAVTACVTGNFTSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEI---GINGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN---VFDKIHQETFGKSGCRRIVPGQ 118
              +  FR   +QKD I + +     +ILE     +   +  K H     + G +    G 
Sbjct: 62   AVMKLFRPAEAQKDLIFILTHRYNAMILECAVQGDDIEIITKAHGNVADRVG-KPAETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DPK R + +   E    +  L+RDT      S  +E      + +       G  +
Sbjct: 121  LAVIDPKARVIGMRLYEGLFKIIPLDRDTHELKATSLRMEEVHVQDVEFLY-----GTQH 175

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
            P    I        QD  G+     + NL     D     ++ K  + V+  A ML+ VP
Sbjct: 176  PTLIVIH-------QDLNGRHIKTHEINLK----DKDFTKIAWK-QDNVETEATMLIPVP 223

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
                G   +++  E+ V +    +  V   I +++          ++         F +L
Sbjct: 224  TPLGG--AIVIGQESVVYHDGDSYVAVAPAIIKQS---------TINCYARVDSKGFRYL 272

Query: 299  LQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
            L    G +F + LE +        V ++K++    I +   +  L +G LF  S  G+  
Sbjct: 273  LGNMSGHLFMMFLETEENSKGLLSVKDIKVELLGDITIPECITYLDNGVLFIGSRHGDSQ 332

Query: 354  LYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANL 413
            L +      D     +  T+MET                        +L PI+DM I +L
Sbjct: 333  LVKLNTTAGD---NGAYVTVMET----------------------FTNLAPIIDMCIVDL 367

Query: 414  FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE-FDAYI 472
             ++   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++  ++D  +D  +
Sbjct: 368  EKQGQGQMITCSGSYKEGSLRIIRNGIGIQEHACIDLPGI-KGMWALRVGIDDSPYDNTL 426

Query: 473  VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
            V+SF   T +L++ GE VEE    GFL    +   + +    ++QV P+  R I+ D + 
Sbjct: 427  VLSFVGHTRILTLSGEEVEETEIPGFLSDQQTFYCANVDFGQIIQVTPTTARLIQCDNKS 486

Query: 531  -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGD--VACL 587
             I EW+ P  + I  V  N  Q+V A +  ++ Y E+   G+   V K  ++ D  VACL
Sbjct: 487  MICEWKPPDDKRISVVACNSCQMVCA-TACDIYYIEI---GESKLVHKSTVTLDYEVACL 542

Query: 588  DIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQA 644
            DI+ + +    +  +AVG + D +  IL L P+  ++++  + +     P S+L    + 
Sbjct: 543  DISPLEDNATHAELVAVGLWTDISACILRL-PN--LEVVHTEKLGGEIIPRSILMAHFEG 599

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR 704
             V            +L   L +G +F  V+D  T +L+D +   LG +P  L +      
Sbjct: 600  IV------------YLLCALGDGSMFYFVLDKNTNRLTDQKKVTLGTQPTILKTFRSLST 647

Query: 705  AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
              +   S RP + Y    + + + ++ + + +  S +++   + +     N++ + TI+ 
Sbjct: 648  TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAEAYQDSLALATKNSVILGTIDE 707

Query: 765  LGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAAG 819
            + +    T +PL  +PRR   Q   +   +I       D   LT   + A+ +       
Sbjct: 708  IQKLHIRT-VPLGESPRRIAYQEASQTFGVITVRTDIQDSSGLTPSRQSASTQT------ 760

Query: 820  MGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQ 879
                 + NM  ++ G         S+ ++G      +  V  + ++D  +       +  
Sbjct: 761  TNVTLSTNMGLLKAG--------ASNAEFG-----QEVEVHNLLIIDQNTFEVLHAHQFM 807

Query: 880  DNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHK 939
              E A S+ +    + +  T   VGTA      P+  +  G I IY + +   +L  + +
Sbjct: 808  QTEYAMSLISAKLGN-DPNTYYIVGTALVNPEEPEPKV--GRIIIYHYAD--GNLTQVSE 862

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRIY 998
             +++G   +L +F GR+LA I   +RLY+    + LR  E   F N + +   T  D I 
Sbjct: 863  KEIKGSCYSLVEFNGRVLASINSTVRLYEWTDDKDLR-LECSHFNNVLALYCKTKGDFIL 921

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            VGD+  S    +Y++ E      A D  P W+TA   +D D   GAD   N++
Sbjct: 922  VGDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNLF 974


>gi|403216596|emb|CCK71092.1| hypothetical protein KNAG_0G00350 [Kazachstania naganishii CBS
           8797]
          Length = 1263

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 197/743 (26%), Positives = 343/743 (46%), Gaps = 108/743 (14%)

Query: 3   LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS---------GRIETLV 53
           LY L+LQ+ +  +A+  G F+     E+    G  L+L     +         GR+E L 
Sbjct: 10  LYHLSLQRQSNYVASCTGRFAELPGHEVAPGVGSRLQLFLATETCLELFNVADGRLERLA 69

Query: 54  STEIFGAIRSLAQFRLTGSQ-KDYIVVGSDSGRIVILEYNPSKNV-----FDKIHQETFG 107
           S  +F +I+++A +   G+  +D ++V SD+G + +L      +       + +  E+  
Sbjct: 70  SWPLFASIKTIAAWIPVGATPRDVLLVTSDAGNLTLLSVERDDSATHGFRLETLVNESMH 129

Query: 108 KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNR---DTAARLTISSPLEAHKSHT 164
           +SG RR+ P  Y AVD + R  M+ A EK KL Y+L      TA+   +SSPLE  ++  
Sbjct: 130 RSGMRRVSPIAYSAVDRRQRCAMVSALEKFKLCYMLGSGATTTASPPLLSSPLEIVRTGY 189

Query: 165 IVYSICGIDCGF-DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW 223
           I   +   D  + DNP+FAA+E+               +   +L FY +DL LNH+ +K 
Sbjct: 190 ITQDLVSCDMEYTDNPVFAALEI--------------LKTTTHLIFYMVDLNLNHIIKKA 235

Query: 224 S-EPVDNGANMLVTVPGGG--------------DGPSGVLVCAENFVIYKNQGHPDVRAV 268
             E  +   ++++ +P                   P  +L       I   QG  ++   
Sbjct: 236 DFELPEAQYDLILALPNLNRYGIRTNVNETDEFTNPFVILANDTAIWIRDMQGQFNIELK 295

Query: 269 IPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIK--YF 326
           +PRR +  AE    I++  TH  K  FF LLQ E GD+FK+ +E D ++  + K    YF
Sbjct: 296 LPRRTNATAETHS-IITGVTHTLKDKFFVLLQNELGDLFKLQIERDPQNGDKPKCSCTYF 354

Query: 327 DTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQ 386
           DTIP    + +  +GY+F  +E+ ++AL Q +++G       S    +ETE       + 
Sbjct: 355 DTIPRATKLHIFSNGYMFLHAEYNDNALLQIESLG-------SMEFKIETE-------YT 400

Query: 387 PRG--LKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSE 444
           PR    +NL  +E+  +L P++   +    +   P  F +         R+L   + +  
Sbjct: 401 PRTQEQENLSVVERQLNLNPLLSANV----DPGVP--FKIITNTSDGEARLLTNAVKLKS 454

Query: 445 MAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVS----DSGFLD 499
           +  + LP  P  +W +K N+ +E+   +V++FN+ T  L   G+++E ++     +  + 
Sbjct: 455 LITAPLPPNPKKIWALKTNIGNEYHELLVIAFNSLTTFLKTSGDSIENLNLPSPPAFIMK 514

Query: 500 TTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALS 557
              +L ++ +  + ++QV  +    +R D    ++ W  P    IV   S + Q+ +ALS
Sbjct: 515 HDQTLHIATLTPNYIIQVCRNLFVQVRTDTFKCVHTWYPPAGIHIVSAASTQTQLALALS 574

Query: 558 GGELIYFEV-DMTGQLLEVEK---HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRI 613
             E+IYFE+   T  L+E  K    E       LDI S      RS F+ V +       
Sbjct: 575 NSEIIYFEIYPETNTLIESTKILTMESKIKSISLDITS-----NRSIFMVVAT------- 622

Query: 614 LSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL---FLNAGLQNGVLF 670
              + D  + I+ VQS S  P+   F+EV  S+  +  A +   L    ++ GL NGV  
Sbjct: 623 ---EEDQLVSIVKVQSQS--PQ---FMEV-VSLQRQGDAINEVLLVESVIHIGLMNGVYV 673

Query: 671 RTVVDMVTGQLSDSRSRFLGLRP 693
           R+ + +   ++  S  +++G +P
Sbjct: 674 RSTMSLRDSEIVASSEKYIGGKP 696



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 152/346 (43%), Gaps = 63/346 (18%)

Query: 916  NIVAGYIHIYRFVEEGKS--LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKR 973
            N++   I+I +   + +S  LEL+++T +      L  F   LL  +   + L+  GKK+
Sbjct: 925  NLLTYKINILKSKNKKRSFNLELVYETTIGKSIRTLSSFGSMLLVVVYGQVVLFGAGKKQ 984

Query: 974  LLRKCENKLFPNT--IVSINTYRD-RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWL 1030
            LL+K   KL P+   + + + + D RI +GDI +S     + +D N     ADD V R++
Sbjct: 985  LLKKSITKLPPSIKEMTAFDCWEDHRIAIGDIHQSVTVMDFDQDLNTFIPVADDVVKRFV 1044

Query: 1031 TAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNG----APNKM 1086
            T    +D  T+ G D+FGNI+ +R+P  V              ++Q KL G       K+
Sbjct: 1045 TCLKFLDNTTVIGGDRFGNIWTLRVPTIVDG-----------VYQQQKLPGNLLEVAKKL 1093

Query: 1087 EEIVQFHVGDVVTSLQKASLVPGGGES-VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHM 1145
                 F+V D+ T +     V       VIY  + G++GA++   +++ +     LE  +
Sbjct: 1094 VLKNHFYVNDIPTEIFVNHAVQNSDRPVVIYTGIQGTIGALIPLLTKNQIKTIKKLETSV 1153

Query: 1146 R------------------------------------QEHP----PLCGRDHMAYRSAYF 1165
                                                 +E P     + GRDH AYRS Y 
Sbjct: 1154 ANIESLLFKDSSVKLLEDGDKEIVPEEESWINKGNAIKESPEGYSSIVGRDHTAYRSYYA 1213

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDR--TPGEILKKLEEIR 1209
            P  ++IDGDLCE F   S D Q  I   +++  +  E+L  + E R
Sbjct: 1214 PSLNIIDGDLCETFVNFSEDEQGIICKSINKKISHKEVLGLINEFR 1259


>gi|410974071|ref|XP_003993471.1| PREDICTED: DNA damage-binding protein 1 [Felis catus]
          Length = 1193

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 278/1247 (22%), Positives = 511/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 56   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 114

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 115  AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 174

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 175  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 221

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 222  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 272

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 273  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 326

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 327  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 377

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 378  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 412

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 413  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 471

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 472  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 531

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 532  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 589

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 590  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 646

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 647  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 694

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 695  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 754

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 755  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 813

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 814  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 862

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 863  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 909

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 910  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 968

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 969  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 1028

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 1029 VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1070

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1071 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1128

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1129 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1175


>gi|198432471|ref|XP_002129229.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
            DNA-binding protein 1) (UV-damaged DNA-binding factor)
            (DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
            (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
            pigmentosum group E-co... isoform 2 [Ciona intestinalis]
          Length = 1142

 Score =  220 bits (561), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 292/1242 (23%), Positives = 509/1242 (40%), Gaps = 182/1242 (14%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y +T  +PT +   I GNF+      +++++   LEL      G +  +    I+G I  
Sbjct: 5    YIVTAHKPTAVKQCITGNFTSGSDLNLLISKNTRLELFTVTPEG-LRPVKEINIYGRIAV 63

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET--FGKSGCRRIVPGQYLA 121
            L  FR  G  +D + + ++     IL+Y  +    + I + +     +  R    G    
Sbjct: 64   LKFFRPEGEDRDLLFILTERYHGCILQYKATDGGCEIITKASGDLSDTVGRPPETGIIGI 123

Query: 122  VDPKGRAVMIGACEKQKLVYVLNRDTAA--------RLTISSPLEAHKSHTIVYSICGID 173
            +DP  +  +IG    + +   L  D  +        R+   S ++A   H          
Sbjct: 124  IDPTSK--LIGLRLYEGVFKFLPYDPTSEELRPFNIRIEELSVIDAKFLH---------- 171

Query: 174  CGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGAN 232
             G+  P    I        Q+S G+       ++   E+      V+  W  E +D  AN
Sbjct: 172  -GYTTPTLVIIY-------QNSQGRHVKTYIVDVRDKEV------VAGPWKQENIDAEAN 217

Query: 233  MLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQK 292
             ++ VP      +G ++  +  + Y N         IP  A L   +  +   A   +  
Sbjct: 218  FIINVP---KPLAGSIIIGQESITYHNGD-----KYIPI-APLCFFQDTINCYAPVDKDG 268

Query: 293  TLFFFLLQTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
            + +  LL    G +F + LE D        V +LKI+    + +  ++  L +G ++  S
Sbjct: 269  SRY--LLGDLAGHLFILLLESDEMMDGTNTVRDLKIELLGEVSIPEAISYLDNGVVYIGS 326

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
              G+  L +         VE    ++++T                        +L PI+D
Sbjct: 327  RLGDSQLIRLHTT----PVEVHLISVLDT----------------------YTNLGPIID 360

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
            M + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++  V D 
Sbjct: 361  MCVVDLDRQGQGQVVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGI-KGLWPLR--VFDT 417

Query: 468  FDAY--IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
              +Y  +V+SF   + +L + GE VEE    GF D + +   S +  + L+Q+    IR 
Sbjct: 418  SRSYDTLVISFVGHSRILQLSGEEVEETDLPGFDDESQTFYCSNVCHNQLVQITEKSIRL 477

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            I    R  ++EW+    R I     N+ QV++A+ G  L YFE+   G+++E    ++  
Sbjct: 478  ISHTERRQVHEWKPKNDRHISVATCNKSQVLLAI-GSSLHYFEI-QPGEVIERACVDLPH 535

Query: 583  DVACLDI---ASVPEGRKRSRFL-----AVGSY-DNTIRILSLDPDDCM--QILSVQSVS 631
            +VACL I    S P   +   F+     AVG + DNT R+L L   + M  Q L+ + + 
Sbjct: 536  EVACLTIEPLVSDPSELEGPDFVTASICAVGLWNDNTARVLKLPTLEEMHQQKLADEII- 594

Query: 632  SPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGL 691
              P S+L ++        DG +     +L   L +G LF   ++  TG +SD +   LG 
Sbjct: 595  --PRSILLVQF-------DGIN-----YLLVTLGDGTLFYFTLNPETGYISDRKKVPLGT 640

Query: 692  RPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVS 751
            +P  L     GG   +   S RP + Y    + + + ++ + + +     SD   + +  
Sbjct: 641  QPTSLSVFTSGGSRTVFACSDRPTVVYSSNKKLVFSNVNLKEVSHMCPLDSDGYPDSLAL 700

Query: 752  VAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKL--MVIIETDQGALTAEEREA 809
               N L + TI+ + +    T +PL  +PRR   Q + +   +V + TD    T ++ + 
Sbjct: 701  ANDNTLLIGTIDEIQKLHIRT-VPLYESPRRIAYQEESQCFGLVTLRTDSVDATGDKMKI 759

Query: 810  AKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS 869
             +      A +                  K  P+         A +D  +  + ++D  +
Sbjct: 760  TRPSASTQASVC----------------TKSPPVDGRSVEGFSATAD--IGSLLIIDQHT 801

Query: 870  ANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVE 929
                   +L  NE   SI +      +  +   VGTA    +  +     G I ++ +++
Sbjct: 802  FEVHHAYQLDTNEEPLSIMSCKL-GSDPNSYFVVGTA--FVYMEETEPKHGRILVFHYID 858

Query: 930  EGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR-KCENKLFPNTI- 987
                L L+ + +V+G    LCQF G +LA I   + +Y    ++ LR +C N+   N + 
Sbjct: 859  --NKLTLVAEKEVKGAVFCLCQFNGHVLAAINTSVSIYQWTTEKELRAECSNQ--SNILA 914

Query: 988  VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKF 1047
            + +    D + VGD+  S     Y+  E  L   A D  P W+TA   +D D   GA+ F
Sbjct: 915  LYLKCKGDFVLVGDLMRSMSILNYKHVEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENF 974

Query: 1048 GNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV 1107
             N++           I +  +G     E+ KL        E   FHVGD + + +  SLV
Sbjct: 975  YNVF-----------ICQKDSGATTDEERSKL-------REAALFHVGDSINTFRHGSLV 1016

Query: 1108 PGG-GES-------VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMA 1159
                GE+       +++GTV GS+G +      D   F   ++  + +    +   DH +
Sbjct: 1017 MQNVGETAVSSKGHILFGTVHGSIGVITTV-DEDLYAFLHSIQNRLAKVIKSVGNIDHES 1075

Query: 1160 YRSAYFPVKD-----VIDGDLCEQFPTLSLDLQRKIADELDR 1196
            +RS     K       +DGDL E F    LDL R+   E+ +
Sbjct: 1076 WRSFCTNEKTEAHRGFVDGDLIECF----LDLNREKMAEVAK 1113


>gi|384941436|gb|AFI34323.1| DNA damage-binding protein 1 [Macaca mulatta]
          Length = 1140

 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYGVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|197097564|ref|NP_001126613.1| DNA damage-binding protein 1 [Pongo abelii]
 gi|75041202|sp|Q5R649.1|DDB1_PONAB RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|55732122|emb|CAH92767.1| hypothetical protein [Pongo abelii]
          Length = 1140

 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +    + ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNVCILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G    + +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYPMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|359546285|pdb|4A11|A Chain A, Structure Of The Hsddb1-Hscsa Complex
 gi|361132519|pdb|4A0K|C Chain C, Structure Of Ddb1-Ddb2-Cul4a-Rbx1 Bound To A 12 Bp Abasic
            Site Containing Dna-Duplex
          Length = 1159

 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 278/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 22   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 80

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 81   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 140

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I         G
Sbjct: 141  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YG 191

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
               P    +        QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 192  CQAPTICFVY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 238

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 239  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 292

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 293  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 343

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 344  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 378

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 379  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 437

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 438  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 497

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 498  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 555

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 556  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 612

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 613  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 660

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 661  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 720

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 721  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 779

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 780  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 828

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 829  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 875

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 876  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 934

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 935  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 994

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 995  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1036

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1037 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1094

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1095 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1141


>gi|221046711|pdb|3EI1|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4 Photoproduct
            Containing Dna-Duplex
 gi|221046715|pdb|3EI2|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Abasic Site
            Containing Dna-Duplex
 gi|221046719|pdb|3EI3|A Chain A, Structure Of The Hsddb1-Drddb2 Complex
          Length = 1158

 Score =  220 bits (560), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 21   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 79

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 80   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 139

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 140  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 186

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 187  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 237

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 238  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 291

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 292  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 342

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 343  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 377

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 378  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 436

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 437  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 496

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 497  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 554

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 555  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 611

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 612  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 659

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 660  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 719

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 720  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 778

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 779  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 827

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 828  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 874

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 875  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 933

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 934  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 993

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 994  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1035

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1036 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1093

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1094 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1140


>gi|321478515|gb|EFX89472.1| hypothetical protein DAPPUDRAFT_303245 [Daphnia pulex]
          Length = 1158

 Score =  220 bits (560), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 300/1285 (23%), Positives = 527/1285 (41%), Gaps = 217/1285 (16%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  + T + + + GNF+      ++VA+   LE  L+ PE    +  L    I+G I
Sbjct: 5    YVVTAHKQTAVTSCVTGNFTSPNDLNLIVAKNYRLEIYLVTPEG---LRPLKEVGIYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYN-----------PSKNVFDKIHQETFGKSG 110
              +  ++    +KD + + +     +ILE +              NV DKI     GK  
Sbjct: 62   AVMKLYKSGNDKKDSLFILTARYNAMILECSGEGENMEIITRTQGNVADKI-----GKPS 116

Query: 111  CRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSIC 170
               I+      +DP  R + +   +    +  L +D       SS ++A+     +  +C
Sbjct: 117  ETGIIA----IIDPDCRVIGLRLYDGLLKIIPLEKD-------SSEIKAYNIR--IEELC 163

Query: 171  GIDCGF----DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP 226
              D  F     NP    I        QD+ G+     + +L   E           W + 
Sbjct: 164  IQDIAFLYGCANPTVVIIH-------QDAHGRHVKTREISLRDKEF------AKTSWKQD 210

Query: 227  -VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKN-QGHPDVRAVIPRRADL-------PA 277
             V+  A ML+ VP   +   G L+  +  + Y N Q +  +   I +++ +       P 
Sbjct: 211  NVETEAAMLLPVP---EPYGGALIIGQESITYHNGQNYVTIAPPIIKQSTVTCYGKVDPN 267

Query: 278  ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCV 337
                L+   A H    LF  +L+ E      VT       V ++KI+    + +   +  
Sbjct: 268  GSRYLLGDLAGH----LFMLVLEKEEKMDGTVT-------VRDIKIELLGEVSIPECLTY 316

Query: 338  LKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIE 397
            L +G +F  S FG+  L +   +   PD   S  T+MET                     
Sbjct: 317  LDNGVVFIGSRFGDSQLVK---LNVTPDDNNSYVTVMET--------------------- 352

Query: 398  QVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAV 457
               +L PI+DM I +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +
Sbjct: 353  -FTNLAPIVDMTIVDLDRQGQGQLVTCSGAYKEGSLRIIRNGIGIHEQASIDLPGI-KGI 410

Query: 458  WTVK--KNVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSL 514
            W +K   + N   D  +V+SF   T VL + GE +EE    G      +     +G DS+
Sbjct: 411  WALKMGSSGNPSVDDTVVLSFVGQTRVLMLNGEEMEETEIPGLTADQQTFFCGNVGKDSV 470

Query: 515  MQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQL 572
            +Q+    +R I  +   +++EW  P  + +  V  N  QV+ A +G EL Y E++   Q+
Sbjct: 471  LQITTGSVRLISVNTKQKLSEWTPPDGKMLNVVACNHGQVLCA-AGRELYYLEMEDDTQV 529

Query: 573  LEVEKHEMSGDVACLDIASVPEGRK------RSRFLAVGSY-DNTIRILSLDPDDCMQIL 625
            +      +  +VACLD+  +  G +      ++   AVG + D + R+L L     ++  
Sbjct: 530  VLKTHVTLDYEVACLDLTPISIGSQQNTTVSKAEVCAVGLWTDISARLLKL---PTLEEF 586

Query: 626  SVQSVSSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSD 683
              + +     P S+L             A    + +L   L +G LF   ++ VT  L D
Sbjct: 587  HKEPLGGEIIPRSILM------------ALFEGTPYLLVALGDGSLFYFSMNPVTKLLGD 634

Query: 684  SRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSD 743
             +   LG +P  L          +   S RP + Y    + + + ++ + + +    +S+
Sbjct: 635  RKKVTLGTQPTVLRPFRSQSTVNVFACSDRPTVIYSSNHKLVFSNVNLKEVAHMCPLNSE 694

Query: 744  QCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----D 798
               + +V     A+ + TI+ + +  +   +PL  +PRR   Q   +   +I +     +
Sbjct: 695  AYPDSLVLATDTAVTIGTIDEI-QKLHIRTVPLGESPRRIAYQENTQTFGVITSRVDIVE 753

Query: 799  QGALTAEEREAAKK-----------ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQ 847
               LT   + A+ +              +A     +  G+    E G +   Y+ L  +Q
Sbjct: 754  SSGLTPARQSASTQAQSVSSSSSLGSAIKAPVSTRDSCGSGGGAEIGQEIEVYNLLIVDQ 813

Query: 848  YGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAK 907
            + +    + +++                     NE A SI +    D +      VGTA 
Sbjct: 814  HSFAVLHAHQFMQ--------------------NEYALSIVSTRLGD-DVNPYYVVGTAL 852

Query: 908  GL--QFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLR 965
             +  +  PK+    G I ++++  +GK L  + + +V+G   +L  F  ++LA I  V+R
Sbjct: 853  VVPEESEPKQ----GRIVLFQWA-DGK-LTTVAEKEVKGACYSLVDFNSKILAAINNVVR 906

Query: 966  LYDLGKKRLLR-KCENKLFPNTIVSINTYR--DRIYVGDIQESFHFCKYRRDENQLYIFA 1022
            LY+   ++ LR +C N    N I+++   R  D I VGD+  S    +Y+  E      A
Sbjct: 907  LYEWTAEKELRLECSNF---NHIIALYLKRKGDFILVGDLMRSITLLQYKTMEGSFEEMA 963

Query: 1023 DDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA 1082
             DS P W++A   +D DT  GA+   N++  +  +D +   EE+                
Sbjct: 964  RDSNPNWMSAVEILDDDTFLGAENSFNLFVCQ--KDSAATTEEE---------------- 1005

Query: 1083 PNKMEEIVQFHVGDVVTSLQKASLV----------PGGGESVIYGTVMGSLGAMLAFSSR 1132
              ++ E+ +FH+GD+V   +  SLV          P  G  V++GTV G++G +    S 
Sbjct: 1006 RQQLTEVGRFHLGDMVNVFRHGSLVMDHAAETLTTPTQG-CVLFGTVHGAIGVVTQLPS- 1063

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLSLDLQ 1187
            +   F S ++  M +   P+   +H  +RS        P +  IDGDL E F  LS D  
Sbjct: 1064 EFYHFLSEVQTRMARVIKPVGKIEHSFWRSFATERKVEPCEGFIDGDLIESFLDLSSDKM 1123

Query: 1188 RKIADELDRTPGEILKKLEEIRNKI 1212
            +++A  L    G  +K+   + + I
Sbjct: 1124 KEVATGLQMDDGSGMKREATVEDII 1148


>gi|361132523|pdb|4A0L|A Chain A, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
            Site Containing Dna-Duplex
 gi|361132525|pdb|4A0L|C Chain C, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
            Site Containing Dna-Duplex
          Length = 1144

 Score =  220 bits (560), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 7    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 65

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 66   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 125

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 126  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 172

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 173  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 223

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 224  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 277

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 278  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 328

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 329  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 363

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 364  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 422

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 423  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 482

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 483  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 540

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 541  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 597

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 598  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 645

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 646  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 705

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 706  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 764

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 765  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 813

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 814  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 860

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 861  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 919

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 920  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 979

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 980  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1021

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1022 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1079

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1080 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1126


>gi|149725200|ref|XP_001502072.1| PREDICTED: DNA damage-binding protein 1 [Equus caballus]
          Length = 1140

 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 279/1247 (22%), Positives = 511/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I         G
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YG 172

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
               P    +        QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 173  CQAPTICFVY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHAQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI------IETDQGALTAEEREAAKKE 813
             TI+ + +  +   +PL  +PR+   Q   +   +      ++   G  TA    A+ + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQA 760

Query: 814  CFEAAGMGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
               +    +  + +    E   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTATHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|255571318|ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
 gi|223534048|gb|EEF35767.1| DNA repair protein xp-E, putative [Ricinus communis]
          Length = 1033

 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 242/1016 (23%), Positives = 435/1016 (42%), Gaps = 168/1016 (16%)

Query: 223  WSEP-VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGV 281
            W++  +DNGA++L+ VP       GVL+  E  ++Y +    +    IP R  +    G 
Sbjct: 152  WAQNNLDNGADLLIPVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITRAYGR 205

Query: 282  LIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSG 341
              V A   R      +LL    G +  + + H+ E V+ LKI+      + +++  L + 
Sbjct: 206  --VDADGSR------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNA 257

Query: 342  YLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVES 401
             ++  S +G+  L +   +   PD + S   ++E+                        +
Sbjct: 258  VVYIGSSYGDSQLVK---LNLQPDAKGSYVEVLES----------------------YVN 292

Query: 402  LMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK 461
            L PI+D  + +L  +   Q+ T  G     SLRI+R G+ ++E A  +L G+   +W+++
Sbjct: 293  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLR 351

Query: 462  KNVNDEFDAYIVVSFNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHP 519
             + +D FD ++VVSF + T  L +++ + +EE    GF     +L       + L+QV  
Sbjct: 352  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHYAVYNQLVQVTS 411

Query: 520  SGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEK 577
            S +R +    R   NEW  P   +I    +N  QV++A  GG L+Y E+   G L   + 
Sbjct: 412  SSVRLVSSTTRELQNEWHAPAGYSINVATANATQVLLATGGGHLVYLEIG-DGTLTHTKH 470

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--P 634
             ++  +++CLDI  + E    S+  AVG + D ++RI SL PD  + +++ + +     P
Sbjct: 471  AQLECEISCLDINPIGENPNYSQLAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIP 527

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             S+L    +               +L   L +G L   ++++ TG+L+D +   LG +P 
Sbjct: 528  RSVLLCSFEGIS------------YLLCALGDGHLLNFLLNLNTGELTDRKKVSLGTQPI 575

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             L +        +   S RP + Y    + L + ++ + + +   F+S    + +     
Sbjct: 576  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 635

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
              L + TI+ + +  +  ++PL    RR   Q + +   +      A +AEE E      
Sbjct: 636  GELTIGTIDDI-QKLHIRSIPLGEHARRICHQEQSRTFAVCSLKNQA-SAEESET----- 688

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                                                           IR+LD ++     
Sbjct: 689  ---------------------------------------------HFIRLLDDQTFEFIS 703

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKS 933
              +L   E   SI + +F D ++     VGTA  +   P+ N    G I ++  VE+GK 
Sbjct: 704  TYQLDPFEYGCSILSCSFSD-DNNLYYCVGTAYVM---PEENEPTKGRILVF-LVEDGK- 757

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIV 988
            L+++ + + +G   +L  F G+LLA I   ++LY     D G + L  +C +      + 
Sbjct: 758  LQVITEKETKGAVYSLNSFNGKLLAAINQKIQLYKWMLRDDGSRELQSECGHHGHILALY 817

Query: 989  SINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
             + T  D I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+   
Sbjct: 818  -VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 876

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV- 1107
            N++ VR                  K  +G  +    ++E + ++H+G+ V   +  SLV 
Sbjct: 877  NLFTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 918

Query: 1108 ------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
                   G   +VI+GTV G +G + +      + F   L+ ++R+    + G  H  +R
Sbjct: 919  RLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYI-FLEKLQSNLRRVIKGVGGLSHEQWR 977

Query: 1162 S-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG----EILKKLEEI 1208
            S          K+ +DGDL E F    LDL R   DE+ +  G    E+ K++EE+
Sbjct: 978  SFNNEKKTVEAKNFLDGDLIESF----LDLSRNRMDEISKAIGVSVEELCKRVEEL 1029



 Score = 45.8 bits (107), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 22/94 (23%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 1  MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
          ++ Y +T Q+PT +  +  GNF+  +   +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3  IWNYVVTAQKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59

Query: 59 GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN 92
          G I +L  FR  G  +D++ + ++  +  +L+++
Sbjct: 60 GRIATLELFRPHGEAQDFLFIATERYKFCVLQWD 93


>gi|358440070|pdb|4A0B|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
            Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
 gi|358440072|pdb|4A0B|C Chain C, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
            Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
          Length = 1159

 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 279/1248 (22%), Positives = 510/1248 (40%), Gaps = 173/1248 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 22   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 80

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 81   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 140

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I         G
Sbjct: 141  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YG 191

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
               P    +        QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 192  CQAPTICFVY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 238

Query: 235  VTVPGGGDGP-SGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIV 284
            + VP     P  G ++  +  + Y N         P ++    V   R D    R +L  
Sbjct: 239  IAVPS----PFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL-- 292

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
                  +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F
Sbjct: 293  ---GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVF 342

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
              S  G+  L +   +  D + + S    MET                        +L P
Sbjct: 343  VGSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGP 377

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            I+DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + 
Sbjct: 378  IVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDP 436

Query: 465  NDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
            N E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R
Sbjct: 437  NRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVR 496

Query: 524  HIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMS 581
             + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM 
Sbjct: 497  LVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEME 554

Query: 582  GDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLL 638
             +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L
Sbjct: 555  HEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSIL 611

Query: 639  FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
                ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L +
Sbjct: 612  MTTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRT 659

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
                    +   S RP + Y    + + + ++ + + Y    +SD   + +     + L 
Sbjct: 660  FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLT 719

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKE 813
            + TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  +
Sbjct: 720  IGTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQ 778

Query: 814  CFEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSA 870
               ++        +     +   G++   ++ L  +Q+ +    + +++           
Sbjct: 779  ALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ---------- 828

Query: 871  NTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEE 930
                      NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +
Sbjct: 829  ----------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SD 874

Query: 931  GKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI 990
            GK L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + +
Sbjct: 875  GK-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYL 933

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N+
Sbjct: 934  KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNL 993

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV--- 1107
            +  +  +D +   +E+                   ++E+  FH+G+ V      SLV   
Sbjct: 994  FVCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQN 1035

Query: 1108 ------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
                  P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +R
Sbjct: 1036 LGETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWR 1093

Query: 1162 SAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            S +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1094 SFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1141


>gi|294873066|ref|XP_002766507.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
 gi|239867408|gb|EEQ99224.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
          Length = 276

 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 121/279 (43%), Positives = 165/279 (59%), Gaps = 34/279 (12%)

Query: 269 IPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDT 328
           +PRR D PAE+G+++V  + H+ K  FFFL+Q+EYGD++KVTL H    VSE++  YFD+
Sbjct: 1   MPRRLDTPAEKGLMVVCWSRHKLKNFFFFLIQSEYGDLYKVTLSHKEGVVSEIQCSYFDS 60

Query: 329 IPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR 388
           IPV  S+CVLK+G+LFAASEFGNHALYQF ++G   DV  +  T          V F+PR
Sbjct: 61  IPVAISICVLKTGFLFAASEFGNHALYQFASLG---DVTPALVTSSHPNRENAVVAFKPR 117

Query: 389 GLKNLVRIEQVESLMPIMDMRIANLFEEEAP---------------------QIFTLCGR 427
            LKNL   +++ SL PI DM++ + F  +                       QI+ L GR
Sbjct: 118 TLKNLTPFDELSSLAPITDMKVMDCFSTQTQVLQADGSGMQQTVTTGMSVGCQIYALSGR 177

Query: 428 GPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK---------KNVNDEFDAYIVVSFNN 478
           GPRS+LRILR GL + E   S+LPG P+A++T+K              E D YIVVSF +
Sbjct: 178 GPRSALRILRHGLTLGEAGASELPGQPNALFTIKPFGASYAPVAEGEVESDRYIVVSFVD 237

Query: 479 ATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQ 516
            TL L +  + + EV+DSGF    P+L    + D S +Q
Sbjct: 238 QTLTLLVTSDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQ 276


>gi|355683071|gb|AER97036.1| damage-specific DNA binding protein 1, 127kDa [Mustela putorius furo]
          Length = 1122

 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 278/1247 (22%), Positives = 511/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|148529014|ref|NP_001914.3| DNA damage-binding protein 1 [Homo sapiens]
 gi|296218432|ref|XP_002807395.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
            [Callithrix jacchus]
 gi|397516558|ref|XP_003828491.1| PREDICTED: DNA damage-binding protein 1 [Pan paniscus]
 gi|402893195|ref|XP_003909786.1| PREDICTED: DNA damage-binding protein 1 [Papio anubis]
 gi|426368721|ref|XP_004051351.1| PREDICTED: DNA damage-binding protein 1 [Gorilla gorilla gorilla]
 gi|12643730|sp|Q16531.1|DDB1_HUMAN RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=DNA damage-binding protein a;
            Short=DDBa; AltName: Full=Damage-specific DNA-binding
            protein 1; AltName: Full=HBV X-associated protein 1;
            Short=XAP-1; AltName: Full=UV-damaged DNA-binding factor;
            AltName: Full=UV-damaged DNA-binding protein 1;
            Short=UV-DDB 1; AltName: Full=XPE-binding factor;
            Short=XPE-BF; AltName: Full=Xeroderma pigmentosum group
            E-complementing protein; Short=XPCe
 gi|203282525|pdb|3E0C|A Chain A, Crystal Structure Of Dna Damage-Binding Protein 1(Ddb1)
 gi|695362|gb|AAA62838.1| X-associated protein 1, partial [Homo sapiens]
 gi|1052865|gb|AAC50349.1| DDBa p127 [Homo sapiens]
 gi|15079750|gb|AAH11686.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|29792243|gb|AAH50530.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|30354567|gb|AAH51764.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|61354161|gb|AAX44048.1| damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|119594341|gb|EAW73935.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_c [Homo
            sapiens]
 gi|168275638|dbj|BAG10539.1| DNA damage-binding protein 1 [synthetic construct]
 gi|189065506|dbj|BAG35345.1| unnamed protein product [Homo sapiens]
 gi|355566436|gb|EHH22815.1| Damage-specific DNA-binding protein 1 [Macaca mulatta]
 gi|380784123|gb|AFE63937.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|380808126|gb|AFE75938.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|380810144|gb|AFE76947.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|383408123|gb|AFH27275.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|410305600|gb|JAA31400.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
 gi|410352015|gb|JAA42611.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
          Length = 1140

 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|403255013|ref|XP_003920244.1| PREDICTED: DNA damage-binding protein 1 [Saimiri boliviensis
            boliviensis]
          Length = 1140

 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|400260815|pdb|4E54|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb)
            Dimerization And Its Roles In Chromatinized Dna Repair
 gi|401871507|pdb|4E5Z|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb)
            Dimerization And Its Roles In Chromatinized Dna Repair
          Length = 1150

 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 13   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 71

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 72   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 131

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 132  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 178

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 179  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 229

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 230  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 283

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 284  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 334

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 335  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 369

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 370  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 428

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 429  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 488

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 489  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 546

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 547  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 603

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 604  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 651

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 652  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 711

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 712  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 770

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 771  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 819

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 820  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 866

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 867  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 925

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 926  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 985

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 986  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1027

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1028 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1085

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1086 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1132


>gi|73983859|ref|XP_533275.2| PREDICTED: DNA damage-binding protein 1 [Canis lupus familiaris]
 gi|291409601|ref|XP_002721069.1| PREDICTED: damage-specific DNA binding protein 1 [Oryctolagus
            cuniculus]
 gi|301781686|ref|XP_002926259.1| PREDICTED: DNA damage-binding protein 1-like [Ailuropoda melanoleuca]
          Length = 1140

 Score =  219 bits (558), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|358440058|pdb|4A08|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex (
            Purine At D-1 Position) At 3.0 A Resolution (Cpd 1)
 gi|358440062|pdb|4A09|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 15 Bp Cpd-Duplex
            (Purine At D-1 Position) At 3.1 A Resolution (Cpd 2)
          Length = 1159

 Score =  219 bits (558), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 278/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 22   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 80

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 81   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 140

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I         G
Sbjct: 141  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YG 191

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
               P    +        QD  G+       +L   E + G       W  E V+  A+M+
Sbjct: 192  CQAPTICFVY-------QDPQGRHVKTYAVSLREKEFNKG------PWKQENVEAEASMV 238

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 239  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 292

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 293  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 343

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 344  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 378

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 379  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 437

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 438  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 497

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 498  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 555

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 556  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 612

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 613  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 660

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 661  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 720

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 721  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 779

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 780  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 828

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 829  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 875

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 876  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 934

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 935  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 994

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 995  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1036

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1037 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1094

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1095 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1141


>gi|358440066|pdb|4A0A|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
            Pyrimidine At D-1 Position) At 3.6 A Resolution (Cpd 3)
          Length = 1159

 Score =  219 bits (558), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 278/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 22   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 80

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 81   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 140

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I         G
Sbjct: 141  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YG 191

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
               P    +        QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 192  CQAPTICFVY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 238

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP       G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 239  IAVP---KPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 292

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 293  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 343

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 344  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 378

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 379  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 437

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 438  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 497

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 498  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 555

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 556  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 612

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 613  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 660

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 661  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 720

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 721  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 779

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 780  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 828

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 829  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 875

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 876  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 934

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 935  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 994

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 995  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1036

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1037 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1094

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1095 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1141


>gi|301616502|ref|XP_002937687.1| PREDICTED: DNA damage-binding protein 1-like [Xenopus (Silurana)
            tropicalis]
          Length = 1140

 Score =  219 bits (557), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 276/1249 (22%), Positives = 520/1249 (41%), Gaps = 175/1249 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFG 59
            Y Y +T Q+PT + A + G+F+      +++A+   LE+  + PE    +  +    ++G
Sbjct: 3    YNYVVTAQKPTAVNACVTGHFTSEDDLNLLIAKNTRLEIYVVTPEG---LRPVKEVGMYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRR 113
             I  +  FR  G  KD + + +      ILEY  + +  D I       Q+  G+     
Sbjct: 60   KIAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETG 119

Query: 114  IVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGID 173
            I+      +DP  R + +   +    V  L RD       +  LE  + H I       D
Sbjct: 120  IIG----IIDPDCRMIGLRLYDGLFKVIPLERDNKELKAFNIRLE--ELHVI-------D 166

Query: 174  CGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR-KWS-EPVDNGA 231
              F   +++          QD  G       +++  YE+ L     S+  W  E V+  A
Sbjct: 167  VKF---LYSCQAPTICFVYQDPQG-------RHVKTYEVSLREKEFSKGPWKQENVEAEA 216

Query: 232  NMLVTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVL 282
            +M++ VP   +   G ++  +  + Y N         P ++    V   R D+   R +L
Sbjct: 217  SMVIAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDVNGSRYLL 273

Query: 283  IVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGY 342
                    +  LF  LL+ E      VTL+       +L+++      +   +  L +G 
Sbjct: 274  -----GDMEGRLFMLLLEKEEQMDGSVTLK-------DLRVELLGETSIAECLTYLDNGV 321

Query: 343  LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            +F  S  G+  L +   + A+ + + S   +MET                        +L
Sbjct: 322  VFVGSRLGDSQLVK---LTAESNEQGSYVVVMET----------------------FTNL 356

Query: 403  MPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
             PI+DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ 
Sbjct: 357  GPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRV 415

Query: 463  NVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSG 521
              + + D  +V+SF   T VL++ GE VEE   +GF+D   +     +    L+Q+  + 
Sbjct: 416  AADRDTDDTLVLSFVGQTRVLTLTGEEVEETDLAGFVDDQQTFFCGNVAHQQLIQITSAS 475

Query: 522  IRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHE 579
            +R + ++ +  ++EW+ P  R +     N  QV++A+  G ++Y+     G+L ++   E
Sbjct: 476  VRLVAQNPQSLVSEWKEPQGRKVSVCSCNSRQVLLAV--GRVLYYLEIHPGELRQISCTE 533

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PES 636
            M  +VACLD+  +      S   A+G + D + RILSL      Q+L  + +     P S
Sbjct: 534  MEHEVACLDVTPLGGSDTLSSLCAIGLWTDISARILSLPG---FQLLHKEMLGGEIIPRS 590

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            +L    ++S        H    +L   L +G LF   ++  TG LSD +   LG +P  L
Sbjct: 591  ILMTSFESS--------H----YLLCALGDGALFYFSLNTDTGLLSDRKKVTLGTQPTVL 638

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
             +        +   S RP + Y    + + + ++ + + Y    +S+   + +     + 
Sbjct: 639  RTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNST 698

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAK 811
            L + TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    ++  R +A 
Sbjct: 699  LTIGTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGSSPLRPSAS 757

Query: 812  KECFEAAGMGE---NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR 868
             +   ++       +G+ +  +   G++   ++ L  +Q+ +    + +++         
Sbjct: 758  TQALSSSVSCSKLFSGSTSPHETSFGEEVEVHNLLIIDQHTFEVLHTHQFLQ-------- 809

Query: 869  SANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV 928
                        NE   S+ +     K+  T   VGTA  + +  +     G I ++++ 
Sbjct: 810  ------------NEYTLSLVSCKL-GKDPTTYFVVGTA--MVYPDEAEPKQGRIVVFQY- 853

Query: 929  EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIV 988
             +GK L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       +
Sbjct: 854  NDGK-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMAL 912

Query: 989  SINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
             + T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   
Sbjct: 913  YLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAF 972

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV- 1107
            N++  +  +D +   +E+                   ++E+  FH+G+ V      SLV 
Sbjct: 973  NLFVCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVM 1014

Query: 1108 -------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY 1160
                   P    SV++GTV G +G + +  S    +    ++  + +    +   +H  +
Sbjct: 1015 QNLGETSPPTQGSVLFGTVNGMIGLVTSL-SESWYNLLLDVQNRLNKVIKSVGKIEHSFW 1073

Query: 1161 RSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            RS +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1074 RSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVIANLQIDDGSGMKR 1122


>gi|413081953|ref|NP_741992.2| DNA damage-binding protein 1 [Rattus norvegicus]
 gi|293344614|ref|XP_002725831.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
 gi|293356422|ref|XP_002728912.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
 gi|149062405|gb|EDM12828.1| damage-specific DNA binding protein 1 [Rattus norvegicus]
          Length = 1140

 Score =  219 bits (557), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + +
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPS 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + E    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGESNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|395852550|ref|XP_003798801.1| PREDICTED: DNA damage-binding protein 1 [Otolemur garnettii]
          Length = 1140

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 278/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++   N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSEPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VCQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|50302849|ref|XP_451361.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74607703|sp|Q6CXH8.1|RSE1_KLULA RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|49640492|emb|CAH02949.1| KLLA0A08129p [Kluyveromyces lactis]
          Length = 1269

 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 197/710 (27%), Positives = 327/710 (46%), Gaps = 91/710 (12%)

Query: 26  KTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGR 85
           K  ++ +A    +EL    N G ++ L    I   I S+ +  +       +V+ +DSG 
Sbjct: 55  KELQLCLATQDCVELYDVSN-GTLDALGKWPIAATILSMTKLNMDRCSHTILVLITDSGN 113

Query: 86  IVILEY---NPSKNVFDK-IHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVY 141
           +   ++   + S  V+ + +  E   +SG RR VP   +  DP+ R V     E+ K+  
Sbjct: 114 LTFWQFERDSVSGKVYVRTLANEPISRSGIRRFVPQYQMVSDPQSRCVFFSGIERSKMC- 172

Query: 142 VLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAAS 201
           VL      +L + SP+E  +S  I  +    D  FDNP+ AAIE++    D         
Sbjct: 173 VLADWQRGKLVVGSPIEIQRSDRITLASAACDVSFDNPVNAAIEVESGTNDY-------- 224

Query: 202 EAQKNLTFYELDLGLNHVS-RKWSEPVDNGANMLVTVPG--------------GGDGPSG 246
                L+FY +DLGLN +  RK     D   N ++  P                 D  + 
Sbjct: 225 ----YLSFYTMDLGLNTLLLRKEHLLEDKSINFVMQCPNLQQYKIKTRPNDETDQDSVNP 280

Query: 247 VLVCAEN--FVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYG 304
            ++C  +    +   +G  +V   +P R  + +     I++   H+ K  FF L+Q+ +G
Sbjct: 281 FVICGYDGYLTLIDLEGFYEVSVQLPVRKTVSSTN---IINGTIHKLKKDFFILMQSNHG 337

Query: 305 DIFKVTLEHDNEHVSE-LKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGAD 363
           D++KV +  D E  +  L+I YFDT+P +  + + KSG LF  SEFG   L QF+++G D
Sbjct: 338 DMYKVGIIPDEETKAPVLEIAYFDTLPTSEDIHIFKSGALFNVSEFGTSYLTQFESLGED 397

Query: 364 PDVEASSS----TLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            +   S +    + +ETE            LKNL  ++ + SL P+     +N     + 
Sbjct: 398 LEKITSYTPGRRSFIETES----------TLKNLSILDSLTSLNPLTSFHASN-----ST 442

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            +  L       +L  L   +   E+  + LP +PS +WTV+   N E  + I +S   +
Sbjct: 443 PLTILAAANQTENLVKLTSAVDFEELISTTLPRIPSKLWTVRIPKN-ETHSLIFLSMETS 501

Query: 480 TLVLSIGE-TVEEV-SDSG-FLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE--DGRIN-- 532
           T +L I E TVE+   DS  F+   PSL V  +   S++QV    +  I E  DG     
Sbjct: 502 TTILKIHEGTVEDFGGDSNPFILNKPSLFVGAMVQRSIIQVTRDCLLQIIEMHDGPYTKK 561

Query: 533 -EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV--DMTGQLLE-VEKHEMSGDVACLD 588
            EW  P    IV    N  Q+V+AL+  E+ YFE+  D   +L + VE       +A L 
Sbjct: 562 LEWYPPAGVGIVTAFCNETQLVVALTNHEICYFEIIEDSLNELQDRVEMDSTVNSIALL- 620

Query: 589 IASVPEGRKRSRFLAVGSYDNTIRILSLDPD--DCMQILSVQSVSSPPESLLFLEVQASV 646
                   ++S +  +G  D++++IL+L     D   I ++QS+ S P SLLF+      
Sbjct: 621 ------AGQKSGYCVLGCEDSSLQILNLQSKHPDFFTICAIQSLISKPHSLLFM------ 668

Query: 647 GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
              D +D    L ++ G+++GV   + +++  G + D R+RF+G +P ++
Sbjct: 669 --RDTSD----LKIHVGMKSGVYLSSKLNINDGTVFDVRTRFVGTKPVQV 712



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 87/404 (21%), Positives = 159/404 (39%), Gaps = 84/404 (20%)

Query: 863  RVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGL--QFWPKRNIVAG 920
            ++L   + NT  ++     E   ++C+ NF       +++  + K +  Q   K N++  
Sbjct: 897  KLLATNNGNTVVIIA---KEVFNAVCSCNFGTNVKYIVISTESGKFIVIQIRVKNNVLET 953

Query: 921  YIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN 980
                          + +H+T V     A+  F  +L   I   + L+ LGKK+LLRK   
Sbjct: 954  --------------QYIHETMVHSKVNAMVSFGDKLACCILGNVVLFGLGKKQLLRKSIT 999

Query: 981  KLFP--NTIVSINTYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHID 1037
            ++ P    + +++ +    + VGDI+ES    KY  D N     ADD V R +T    ID
Sbjct: 1000 EMPPYITQVTALDQWDGTMLAVGDIRESVTIFKYDIDNNSFIGVADDIVKRHVTTVKFID 1059

Query: 1038 FDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWE---QGKLNGAPNKMEEIVQFHV 1094
              ++ G D+FGN + +R+  +    +  +    +   E      +N  P K E +   ++
Sbjct: 1060 VSSVIGGDRFGNCWVLRVNYESDTRVASNIKACQYTLETLCHMYMNDTPMKFEIVNHMNM 1119

Query: 1095 GDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE--------MHMR 1146
             D                ++++  + G++G  +   +R +   +   +        +H +
Sbjct: 1120 SD--------------RPAILWIGLQGTIGCFVPLITRKEQQLYQSFQSTYAELDVLHFQ 1165

Query: 1147 QEHPP---------------------------------LCGRDHMAYRSAYFPVKDVIDG 1173
              + P                                   GRD ++YRS+Y P K++IDG
Sbjct: 1166 DNNKPEEVDLEETEGALDEAYHTTKNTDHQDYVEGVISRVGRDFLSYRSSYAPSKNIIDG 1225

Query: 1174 DLCEQFPTLSLDLQRKIADELDRTPGEIL----KKLEEIRNKIV 1213
            +  EQ  T     QR IA ++       L    K + E+R   V
Sbjct: 1226 ETLEQLTTYLPSDQRWIASKMKHADSGKLDIFNKYINEMRTNYV 1269


>gi|418316|sp|P33194.1|DDB1_CERAE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=DDBa; AltName:
            Full=Damage-specific DNA-binding protein 1; AltName:
            Full=UV-damaged DNA-binding protein 1; Short=UV-DDB 1
 gi|304026|gb|AAA03021.1| UV-damaged DNA-binding protein [Chlorocebus aethiops]
          Length = 1140

 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 276/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   +  +F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTAHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|260819268|ref|XP_002604959.1| hypothetical protein BRAFLDRAFT_92599 [Branchiostoma floridae]
 gi|229290288|gb|EEN60969.1| hypothetical protein BRAFLDRAFT_92599 [Branchiostoma floridae]
          Length = 163

 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 94/160 (58%), Positives = 127/160 (79%)

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGG 1111
             VRLP  V+DE++EDPTG K  W++G LNGA  K + I  +HVG+VVTS+QKA+L+PGG 
Sbjct: 1    MVRLPAGVTDEVDEDPTGNKALWDRGLLNGASQKADVICNYHVGEVVTSVQKATLIPGGS 60

Query: 1112 ESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVI 1171
            ES++Y T+ G +G ++ F+S +D DFF HLEMH+R EHPPLCGRDH+++RS Y+PVK+VI
Sbjct: 61   ESLVYTTISGGVGILVPFTSHEDHDFFQHLEMHIRSEHPPLCGRDHLSFRSYYYPVKNVI 120

Query: 1172 DGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            DGDLCEQF ++    Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 121  DGDLCEQFNSMEPSKQKSVAEELDRTPAEVSKKLEDIRTR 160


>gi|344295432|ref|XP_003419416.1| PREDICTED: DNA damage-binding protein 1 [Loxodonta africana]
          Length = 1140

 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 275/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      V+L+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVSLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAQQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + +     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNVSVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|7657011|ref|NP_056550.1| DNA damage-binding protein 1 [Mus musculus]
 gi|134034087|sp|Q3U1J4.2|DDB1_MOUSE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=Damage-specific DNA-binding
            protein 1; AltName: Full=UV-damaged DNA-binding factor
 gi|5931596|dbj|BAA84699.1| XPE UV-damaged DNA binding factor [Mus musculus]
 gi|16307148|gb|AAH09661.1| Damage specific DNA binding protein 1 [Mus musculus]
 gi|74182145|dbj|BAE34102.1| unnamed protein product [Mus musculus]
 gi|74196166|dbj|BAE32993.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ +  
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPG 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI------IETDQGALTAEEREAAKKE 813
             TI+ + +  +   +PL  +PR+   Q   +   +      ++   G  TA    A+ + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQA 760

Query: 814  CFEAAGMGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
               +    +  + +    E   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GEASTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|74215029|dbj|BAE33503.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ +  
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPG 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI------IETDQGALTAEEREAAKKE 813
             TI+ + +  +   +PL  +PR+   Q   +   +      ++   G  TA    A+ + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQA 760

Query: 814  CFEAAGMGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
               +    +  + +    E   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--RDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GEASTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|147906138|ref|NP_001083624.1| DNA damage-binding protein 1 [Xenopus laevis]
 gi|82186503|sp|Q6P6Z0.1|DDB1_XENLA RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|38303806|gb|AAH61946.1| Ddb1 protein [Xenopus laevis]
          Length = 1140

 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 277/1249 (22%), Positives = 518/1249 (41%), Gaps = 175/1249 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFG 59
            Y Y +T Q+PT + A + G+F+      +++A+   LE+  + PE    +  +    ++G
Sbjct: 3    YNYVVTAQKPTAVNACVTGHFTSEDDLNLLIAKNTRLEIYVVTPEG---LRPVKEVGMYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRR 113
             I  +  FR  G  KD + + +      ILEY  S +  D I       Q+  G+     
Sbjct: 60   KIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGDSIDIITRAHGNVQDRIGRPSETG 119

Query: 114  IVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGID 173
            I+      +DP  R + +   +    V  L RD       +  LE  + H I       D
Sbjct: 120  IIG----IIDPDCRMIGLRLYDGLFKVIPLERDNKELKAFNIRLE--ELHVI-------D 166

Query: 174  CGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR-KWS-EPVDNGA 231
              F   +++          QD  G       +++  YE+ L     S+  W  E V+  A
Sbjct: 167  VKF---LYSCQAPTICFVYQDPQG-------RHVKTYEVSLREKEFSKGPWKQENVEAEA 216

Query: 232  NMLVTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVL 282
            +M++ VP   +   G ++  +  + Y N         P ++    V   R D+   R +L
Sbjct: 217  SMVIAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDVNGSRYLL 273

Query: 283  IVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGY 342
                    +  LF  LL+ E      VTL+       +L+++      +   +  L +G 
Sbjct: 274  -----GDMEGRLFMLLLEKEEQMDGSVTLK-------DLRVELLGETSIAECLTYLDNGV 321

Query: 343  LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            +F  S  G+  L +                 + TE   Q  +        +V +E   +L
Sbjct: 322  VFVGSRLGDSQLVK-----------------LTTESNEQGSY--------VVVMETFTNL 356

Query: 403  MPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
             PI+DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ 
Sbjct: 357  GPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRV 415

Query: 463  NVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSG 521
              + + D  +V+SF   T VL++ GE VEE   +GF+D   +     +    L+Q+  + 
Sbjct: 416  AADRDTDDTLVLSFVGQTRVLTLTGEEVEETDLAGFVDDQQTFFCGNVAHQQLIQITSAS 475

Query: 522  IRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHE 579
            +R + ++ +  ++EW+ P  R +     N  QV++A+  G ++Y+     G+L +    E
Sbjct: 476  VRLVSQNPQNLVSEWKEPQGRKVSVCSCNSRQVLLAV--GRVLYYLEIHPGELRQTSCTE 533

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PES 636
            M  +VACLD+  +      S   A+G + D + RILSL      Q+L  + +     P S
Sbjct: 534  MEHEVACLDVTPLGGNDTLSSLCAIGLWTDISARILSLPG---FQLLHKEMLGGEIIPRS 590

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            +L    ++S        H    +L   L +G LF   ++  TG LSD +   LG +P  L
Sbjct: 591  ILMTSFESS--------H----YLLCALGDGALFYFSLNTDTGLLSDRKKVTLGTQPTVL 638

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
             +        +   S RP + Y    + + + ++ + + Y    +S+   + +     + 
Sbjct: 639  RTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNST 698

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAK 811
            L + TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    ++  R +A 
Sbjct: 699  LTIGTIDEI-QKLHIRTVPLFESPRKICYQEVSQCFGVLSSRIEVQDASGGSSPLRPSAS 757

Query: 812  KECFEAAGMGE---NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR 868
             +   ++       +G+ +  +   G++   ++ L  +Q+ +    + +++         
Sbjct: 758  TQALSSSVSCSKLFSGSTSPHETSFGEEVEVHNLLIIDQHTFEVLHTHQFLQ-------- 809

Query: 869  SANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV 928
                        NE   S+ +     K+  T   VGTA  + +  +     G I ++++ 
Sbjct: 810  ------------NEYTLSLVSCKL-GKDPTTYFVVGTA--MVYPDEAEPKQGRIVVFQY- 853

Query: 929  EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIV 988
             +GK L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       +
Sbjct: 854  NDGK-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMAL 912

Query: 989  SINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
             + T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   
Sbjct: 913  YLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAF 972

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV- 1107
            N++  +  +D +   +E+                   ++E+  FH+G+ V      SLV 
Sbjct: 973  NLFVCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVM 1014

Query: 1108 -------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY 1160
                   P    SV++GTV G +G + +  S    +    ++  + +    +   +H  +
Sbjct: 1015 QNLGETSPPTQGSVLFGTVNGMIGLVTSL-SESWYNLLLDVQNRLNKVIKSVGKIEHSFW 1073

Query: 1161 RSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            RS +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1074 RSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVIANLQIDDGSGMKR 1122


>gi|410930842|ref|XP_003978807.1| PREDICTED: splicing factor 3B subunit 3-like [Takifugu rubripes]
          Length = 399

 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 145/212 (68%), Gaps = 5/212 (2%)

Query: 1005 SFHFCKYRRDENQLYIF---ADDSV--PRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            S   C++ +  +  Y+    A D +  P+ +       +  ++G +K   ++ VRLP + 
Sbjct: 185  SVAVCRFPKTGDDWYVLVGVARDMILNPKSVGGGFIYTYRLVSGGEKLEFVHKVRLPPNT 244

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTV 1119
            SD+++EDPTG K  W++G LNGA  K E  + +HVG+ V SLQK +L+PGG ES++Y T+
Sbjct: 245  SDDVDEDPTGNKALWDRGLLNGASQKAEVAMNYHVGETVLSLQKTTLIPGGSESLVYTTL 304

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
             G +G ++ F+S +D DFF HLEMHMR E PPLCGRDH+++RS YFPVK+VIDGDLCEQF
Sbjct: 305  SGGIGILVPFTSHEDHDFFQHLEMHMRAEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQF 364

Query: 1180 PTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             ++    Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 365  NSMDPHRQKSLAEELDRTPPEVSKKLEDIRTR 396



 Score =  182 bits (463), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 148/244 (60%), Gaps = 10/244 (4%)

Query: 703 GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
           G+ A+L +SSR WL Y ++ RF LTPLSYETLEYA+ F+S+QC EG+V+++ N LR+  +
Sbjct: 3   GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILAL 62

Query: 763 ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAA 818
           E+LG  FN+ A PL+YTPR+FV+ P+   +V+IE+D  A T    A+ ++   +E  EAA
Sbjct: 63  EKLGAVFNQVAFPLQYTPRKFVIHPETNNLVLIESDHNAYTEATKAQRKQQMAEEMVEAA 122

Query: 819 GMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLEL 878
           G  E      +      +EN    L +  +G PKA + +W S +R+++P    T   ++L
Sbjct: 123 GEDERELA-AEMAAAFLNEN----LPEAIFGAPKAGAGQWASLVRLINPIQGVTLDQVQL 177

Query: 879 QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
           + NEAAFS+    F        + VG A+ +   PK ++  G+I+ YR V  G+ LE +H
Sbjct: 178 EQNEAAFSVAVCRFPKTGDDWYVLVGVARDMILNPK-SVGGGFIYTYRLVSGGEKLEFVH 236

Query: 939 KTQV 942
           K ++
Sbjct: 237 KVRL 240


>gi|320163506|gb|EFW40405.1| UV-damaged DNA binding protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1123

 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 287/1223 (23%), Positives = 503/1223 (41%), Gaps = 195/1223 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y +T   P+ +   + GNF+      +++A+   +E+      G I  L+   ++G I  
Sbjct: 29   YIVTAHPPSVVTHVVTGNFTAPHERNLIIAKSTRIEIHTIAADG-IHGLLDAGMYGRIAI 87

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSG------------ 110
            +  FR   +Q+D + + ++     +L Y+  +  +  K + +   KSG            
Sbjct: 88   MQLFRPPNAQQDLLFICTERYAFTVLAYDAQTGELVTKANGDLQDKSGNPADLGPIGVID 147

Query: 111  --CRRIVPGQYLAVDPKGRA---VMIG-ACEKQKLVYVLNRDTAARLTISSPLEAHKSHT 164
              CR I  G+  A+D  G        G +C  + +V++  R       +  P++ H    
Sbjct: 148  PDCRLI--GENAALDLWGGGHPPFYFGCSCSLRLVVWIGLRLYNGMFKVI-PIDPHGQFK 204

Query: 165  IVYSI---------CGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLG 215
              ++I              G+D P    +  D  E     T Q   + ++   F E    
Sbjct: 205  DAFNIRLEELQVFDIKFLRGYDRPTILVLYQDTKETRHVKTYQVLLKEKE---FAEGPWA 261

Query: 216  LNHVSRKWSEPVDNGANMLVTV--PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRA 273
             N+V        + GA++L+ V  P GG     VL+  E  + Y +      R+V  R A
Sbjct: 262  QNNV--------EGGASLLIPVLMPLGG-----VLIVGEQTITYHSGSA--FRSVAMRPA 306

Query: 274  DLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIPVT 332
             +     +      T+R      FLL    G++  V L HD +  V+ +KI       + 
Sbjct: 307  IIKCYSVI-----DTNR------FLLADSEGNLLSVLLTHDRQDKVTAIKIDRLGVTSIL 355

Query: 333  ASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKN 392
            + +  L +G +F  S+FG+  L +                  E +E             +
Sbjct: 356  SCLTYLDNGVVFGGSQFGDSQLLRLAT---------------ERDE-----------TGS 389

Query: 393  LVRI-EQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLP 451
             VR+ E   +L PI DM + +L  +   Q+ T  G     SLR++R G+ + E A  +LP
Sbjct: 390  FVRVLESFSNLGPICDMAVVDLERQGQCQVVTCSGAFKDGSLRVVRNGVGIEEQATIELP 449

Query: 452  GVPSAVWTVKKNVNDEFDAYIVVSFNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLI 509
            G+   +W++K      + + +VVSF   T  L +S GE +EE+   G    + +L  + +
Sbjct: 450  GI-KGIWSLKPTEAALYRSILVVSFIGETRLLGMSSGEELEEMQIPGLDQNSQTLHCANV 508

Query: 510  GDDSLMQVHPSGIRHIR--EDGRINEWR--------TPGKRTIVKVGSNRLQVVIALSGG 559
              D  +QV  + +R +       +  W          PG R I    SN  QV++A  GG
Sbjct: 509  SGDQFLQVTATEVRLVNCSTQALVASWSPASVPDRYAPGTR-ITMASSNDFQVLVACGGG 567

Query: 560  ELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDP 618
             L+   V+ +G L+ +    M  ++AC+DI  +  G+  S+  AVG + D T+R+LS+  
Sbjct: 568  HLVCLSVEASGNLVPIGHARMDHEIACVDITPI-GGQPLSQVCAVGLWTDITVRVLSVPT 626

Query: 619  DDCMQILSVQSVSSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDM 676
             +  Q+L VQ +     P S+L    +           P  L     L +G +     D+
Sbjct: 627  LE--QVL-VQPLEGQIIPRSILMATFEG---------QPRLL---CALGDGSMHTYSFDV 671

Query: 677  VTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEY 736
            ++ QL+D +   LG +P  L + V  G+  +   S RP + Y    + L + ++   + +
Sbjct: 672  LSQQLTDHKRVSLGTQPILLSAFVSRGQTHVFACSDRPTVIYSSNRKLLYSNVNLREVTH 731

Query: 737  AASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVL-QPKKKLMVII 795
               F+S+   + +  V+  +L + TI+ + +  +  A+PL   PRR    +P +   V  
Sbjct: 732  VCPFTSESFADCLAVVSSTSLTIGTIDEI-QKLHVRAIPLGEMPRRIAYHEPTRTYGV-- 788

Query: 796  ETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAES 855
                          A     E   +G N +GN+           +D         P++ S
Sbjct: 789  --------------ATVTLAEPLPVGSN-SGNVAARAQNVRPMAFD-------DGPRSPS 826

Query: 856  DKW--VSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF-HDKEHGTL-LAVGTAKGL-- 909
            D     S +R+ D ++       +L   E   S  + +F +D    T+ L VGTA  +  
Sbjct: 827  DVLEDTSFVRLFDGQTFEIRDSFQLPSTETIMSFISCSFANDSSDSTVYLVVGTAFVIPS 886

Query: 910  QFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL 969
            +  PKR        I  F   G +L L+    V+G   +L  F G+LLAGI   + L+  
Sbjct: 887  EDEPKRG------RILVFDVAGGALHLVTAKDVKGCVYSLNAFNGKLLAGINSKVNLFKW 940

Query: 970  -----GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD 1024
                 G + L+ +C +     T+  + +  D I VGD+  S     Y+   + +   A D
Sbjct: 941  NLTGDGIRELVSECSHHGHILTLY-LKSRGDFIIVGDLMRSISLLMYKSGTSSIEEIAQD 999

Query: 1025 SVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPN 1084
            + P W+TA   +D D   G +   NI+  R   + S + E                    
Sbjct: 1000 TCPNWVTAVDMLDDDVFIGGESSFNIFTCRRNLEASTDEER------------------K 1041

Query: 1085 KMEEIVQFHVGDVVTSLQKASLV---PGGGE-----SVIYGTVMGSLGAMLAFSSRDDVD 1136
            ++E + +FHVG+ +   +  SLV   P   E     S ++GT  G +G ++A  +R   +
Sbjct: 1042 RLEVVGEFHVGEFINQFRAGSLVMKLPDEQEQPIQPSTLFGTGNGVIG-VIARLTRSQYE 1100

Query: 1137 FFSHLEMHMRQEHPPLCGRDHMA 1159
            F   ++  M +    + G +H A
Sbjct: 1101 FLQLVQAAMAKVIKGVGGLNHSA 1123


>gi|441604084|ref|XP_004087862.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
            [Nomascus leucogenys]
          Length = 1140

 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I         G
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YG 172

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
               P    +        QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 173  CQAPTICFVY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L P 
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVAAMET----------------------FTNLGPX 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|122692537|ref|NP_001073731.1| DNA damage-binding protein 1 [Bos taurus]
 gi|426251842|ref|XP_004019630.1| PREDICTED: DNA damage-binding protein 1 [Ovis aries]
 gi|134034086|sp|A1A4K3.1|DDB1_BOVIN RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|119223918|gb|AAI26630.1| Damage-specific DNA binding protein 1, 127kDa [Bos taurus]
 gi|296471644|tpg|DAA13759.1| TPA: DNA damage-binding protein 1 [Bos taurus]
          Length = 1140

 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 276/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RI  L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGMSPLCAIGLWTDISARIAKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|74138855|dbj|BAE27231.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ +  
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPG 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD     +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPNSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI------IETDQGALTAEEREAAKKE 813
             TI+ + +  +   +PL  +PR+   Q   +   +      ++   G  TA    A+ + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQA 760

Query: 814  CFEAAGMGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
               +    +  + +    E   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GEASTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|354504619|ref|XP_003514371.1| PREDICTED: DNA damage-binding protein 1-like [Cricetulus griseus]
 gi|344258340|gb|EGW14444.1| DNA damage-binding protein 1 [Cricetulus griseus]
          Length = 1140

 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 276/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + +
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPS 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|444513057|gb|ELV10249.1| DNA damage-binding protein 1 [Tupaia chinensis]
          Length = 1146

 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 281/1257 (22%), Positives = 513/1257 (40%), Gaps = 185/1257 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSSGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGR------- 1155
                 P  G SV++GTV G +G + + S     + + +L + M+     +  R       
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSLS-----ESWYNLLLDMQNRLNKVIKRCFQISPN 1071

Query: 1156 ---DHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
               D   +RS +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1072 SLTDMSTWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1128


>gi|119594342|gb|EAW73936.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_d [Homo
            sapiens]
          Length = 1146

 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 280/1254 (22%), Positives = 511/1254 (40%), Gaps = 179/1254 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSS---RDDVDFFSHLEMHMRQ---------EHP 1150
                 P  G SV++GTV G +G + + S       +D  + L   +++          HP
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKRCFLISTCSLTHP 1076

Query: 1151 PLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
                  H   ++   P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1077 STWRSFHTERKTE--PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1128


>gi|311247551|ref|XP_003122699.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Sus scrofa]
          Length = 1140

 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 276/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSNQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RI  L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARISKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|241260143|ref|XP_002404926.1| DNA repair protein xp-E, putative [Ixodes scapularis]
 gi|215496735|gb|EEC06375.1| DNA repair protein xp-E, putative [Ixodes scapularis]
          Length = 1148

 Score =  216 bits (551), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 299/1261 (23%), Positives = 518/1261 (41%), Gaps = 191/1261 (15%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFG 59
            Y Y +T  +PTG+ A + GNF+      +++A+   LE+  + PE    +  +    I+G
Sbjct: 3    YNYVVTAHKPTGVCACVTGNFTSPNDINLILAKNTRLEIYVVSPEG---LRPVKEIGIYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY-----NPSKNVFDKIHQETFGKSGCRRI 114
             I  +  FR  G +KD +   +      ILE      +    +  K H      S  R  
Sbjct: 60   RISIMKLFRPPGEKKDLLFFLTAKYNAAILECIQDGGDGGVEIITKAHG-NIADSFSRPS 118

Query: 115  VPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC 174
              G    +DP+ R + +   +    V  L+RD       +  +E      + +       
Sbjct: 119  ETGNIGIIDPECRVIGLRLYDGLFKVIPLDRDNRELKAFNIRMEELTVQDMEFL-----H 173

Query: 175  GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL-GLNHVSRKWSEP-VDNGAN 232
            G   P    +        QDS         +++  YE+ L     V   W +  V++ A 
Sbjct: 174  GCKTPTIVLLH-------QDSQA-------RHMKTYEISLKDKEFVKGPWKQDHVESEAT 219

Query: 233  MLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQK 292
            +++ VP     P     C     I  + G  DV  + P             V A   R  
Sbjct: 220  IVIAVPE----PFCDARCIGQESITYHNGDQDV-VITPHLIRQSTIVCYGKVDANGSR-- 272

Query: 293  TLFFFLLQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
                +LL    G +F + LE +++      V +LK+++   I +   M  L +G ++  S
Sbjct: 273  ----YLLGDMAGRLFMLLLEREDKMDGTTTVKDLKLEFLGEITIAECMTYLDNGVVYVGS 328

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
              G+  L +   + ++ + + S   +ME       VF                +L PI+D
Sbjct: 329  RLGDSQLIK---LNSERNEQGSYVEVME-------VF---------------TNLGPIVD 363

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
            M + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ N +  
Sbjct: 364  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGIWPLRVNTDSS 422

Query: 468  FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
             D  +V+SF   T VL + GE VEE   +GF  +  +     + ++ L+QV  + +R + 
Sbjct: 423  RDNTLVLSFVGQTRVLMLSGEEVEETELAGFDISQQTFFCGNVRNNQLIQVTAAAVRLV- 481

Query: 527  EDGR----INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
             DG+    +NEW+ PG + I  V  N+ QVV A+   E+   E+   G L +    EM  
Sbjct: 482  -DGKTKLLLNEWKPPGGKNISVVTCNQNQVVCAVR-QEVFCLEI-ADGTLKQTSNAEMEN 538

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE 641
            +VACLDI  + +G  +S   AVG + D +IR+L L   + +Q  ++      P S+L   
Sbjct: 539  EVACLDITPLNDGSGKSDLCAVGLWTDISIRVLRLPSLEQLQKENIGG-EIIPRSILMTT 597

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
             +          H    +L   L +G LF  ++D  TG +SD +   LG +P  L +   
Sbjct: 598  FEGV--------H----YLLCALGDGSLFYFLLDASTGAVSDRKKVTLGTQPTVLKTFKS 645

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
               + +   S RP + Y    + + + ++ + + +    +S+   + +       L + T
Sbjct: 646  LSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDGTLLIGT 705

Query: 762  IERLGETFNETALPLRYTP--RRFVLQPKKKL--MVIIETD---QGALT-------AEER 807
            I+ + +      L +R  P   R   Q   +   ++ I  D    G LT        + +
Sbjct: 706  IDEIQK------LHIRTVPLGERIAYQEATQTFGVITIRNDIQGTGGLTPVRPSASTQAQ 759

Query: 808  EAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP 867
                     +      G+GN DQ+  G +   ++ L  +Q+ +    + +++        
Sbjct: 760  NVTYSSTMSSVFKPGTGSGN-DQL--GQEVEVHNLLIVDQHTFEVLHAHQFMQ------- 809

Query: 868  RSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGL--QFWPKRNIVAGYIHIY 925
                          E A SI +      +      VGTA  L  +  PK+    G I I+
Sbjct: 810  -------------TEYAMSIVSTRL-GSDPNVYFIVGTAIVLPDESDPKQ----GRIIIF 851

Query: 926  RFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPN 985
             +V +GK L+ + + +++G P +L +F G+LLA I   +RL++   +R L   E   F N
Sbjct: 852  HWV-DGK-LQQVAEKEIKGAPYSLLEFNGKLLASINSTVRLFEWNAERELHN-ECSHFNN 908

Query: 986  TI-VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
             + + + T  D I VGD+  S     Y+  E      A D    W+ A   +D DT  GA
Sbjct: 909  ILALYLKTKGDFILVGDLMRSMSLLAYKPLEGSFEEIARDYQTNWMCAVEILDDDTFLGA 968

Query: 1045 DKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKA 1104
            +   N++  +  +D +   +ED                   ++E+ QFH+G+ V   +  
Sbjct: 969  ESTTNLFVCQ--KDSAATTDED----------------RQHLQEVGQFHLGEFVNIFRHG 1010

Query: 1105 SLV---PGGGE-----SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRD 1156
            SLV   PG        SV++GT+ G++G +    S D  +F   ++ ++ +    +   D
Sbjct: 1011 SLVMQHPGEASSPTQGSVLFGTIHGAIGLVAQLPS-DFYNFLLEVQGNLTKVIKSVGKID 1069

Query: 1157 HMAY--------RSAYFPVKD-----VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILK 1203
            H  Y        RS     K       IDGDL E F  LS D  +++   +    G  +K
Sbjct: 1070 HTLYPFVRLFTWRSFSTERKTEQAQGFIDGDLIESFLDLSRDKMQEVLQGIQMDDGSGMK 1129

Query: 1204 K 1204
            +
Sbjct: 1130 R 1130


>gi|431910407|gb|ELK13480.1| DNA damage-binding protein 1 [Pteropus alecto]
          Length = 1143

 Score =  216 bits (550), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 278/1250 (22%), Positives = 510/1250 (40%), Gaps = 174/1250 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY-- 1160
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  Y  
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSLYPS 1075

Query: 1161 -RSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             RS +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 QRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1125


>gi|332030156|gb|EGI69950.1| DNA damage-binding protein 1 [Acromyrmex echinatior]
          Length = 1138

 Score =  216 bits (550), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 286/1236 (23%), Positives = 516/1236 (41%), Gaps = 155/1236 (12%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT + A + GNF+      +++A+   LE  L+ PE    +  L    I+G I
Sbjct: 5    YVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEG---LRPLKEVGIYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              +  FR    +KD + + +     +ILE         +  K H     + G +    G 
Sbjct: 62   SVIKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEDIEIITKAHGNVADRIG-KASETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DPK R + +   +    +  L++D       S  ++  +   + +       G  N
Sbjct: 121  KAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFL-----HGCAN 175

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTV 237
            P    I        QD  G+     + NL   E           W  + V+  A M++ V
Sbjct: 176  PTLILIH-------QDINGRHVKTHEINLRDKEF------AKIPWRQDNVEREAMMVIPV 222

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
            P       G ++  +  ++Y + G   V AV+P     P  +   I   A    + L  +
Sbjct: 223  PS---PICGAIIIGQESILYHD-GTTYV-AVVP-----PIIKQSTITCYAKVDNQGL-RY 271

Query: 298  LLQTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            LL    G +F + LE +     ++ V +LK++    I +   +  L +G ++  S  G+ 
Sbjct: 272  LLGDMAGHLFMLFLEQEKKPDGSQVVKDLKVELLGEISIPECITYLDNGVIYVGSRLGDS 331

Query: 353  ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
             L +        D   S    MET                        +L PI+DM + +
Sbjct: 332  QLIKLI---TKADENGSYCVPMET----------------------FTNLAPIVDMAVVD 366

Query: 413  LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +K      FD  +
Sbjct: 367  LERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASMDLPGI-KGMWALKVG-GSHFDNTL 424

Query: 473  VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI 531
            V+SF   T +L++ GE VEE    GF+    +     + DD  +Q+  + +R I  + +I
Sbjct: 425  VLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTDDLFIQITSTSVRLISHENKI 484

Query: 532  --NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
              +EW    KRTI  V  N  QV+ A +G +L Y E+ +  Q++      +  +VACLDI
Sbjct: 485  VVSEWEPQNKRTISVVACNGTQVLCA-TGNDLFYIEI-ICNQIVSKGFVTLQHEVACLDI 542

Query: 590  ASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASV 646
            + + +G   ++ +AVG + D ++RIL+L   + +  ++L  + +   P S+L    + + 
Sbjct: 543  SPL-DGVNEAKIVAVGLWTDISVRILTLPNLEEINKELLGGEII---PRSILMTCFEGNT 598

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
                        +L   L +G ++  ++   +G LSD +   LG +P  L +        
Sbjct: 599  ------------YLLCALGDGSMYYFILHRQSGMLSDKKKVTLGTQPTVLRTFRSLSTTN 646

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
            +   S RP + Y    + + + ++ + + +  S +++   + +     + + + TI+ + 
Sbjct: 647  VFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEI- 705

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
            +  +   +PL  +PRR   Q   +   +I               + +  E++G+    + 
Sbjct: 706  QKLHIRTVPLGESPRRIAYQESSQTFGVI-------------TMRVDVQESSGVSIVRH- 751

Query: 827  NMDQMENGDDENKYDPLSDEQYGYPKAE--SDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
            +          + +    ++  G+  +E   +  V  + ++D  +        L   E A
Sbjct: 752  SASTQAASTSSSSHVVSHNKPSGHTASEIGQEIEVHNLLIIDQHTFEVLHAHTLMATEYA 811

Query: 885  FSICTVNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
             S+ +     ++  +   VGTA     +  PK     G I +Y +  EGK  ++  K ++
Sbjct: 812  LSLISTKL-GEDPTSYFVVGTAFINPDETEPK----MGRILLYHW-SEGKFTQVAEK-EI 864

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGD 1001
            +G   +L +F G+LLA I   +RL++   ++ LR  E   F N I + + T  D + VGD
Sbjct: 865  KGSCYSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFVLVGD 923

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +  S    +Y+  E      A D  P W+T+   +D DT  GA+   N++  +     + 
Sbjct: 924  LMRSLTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFVCQKDSAATS 983

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG-GES------- 1113
            E E                    +M+EI QFH+GD+V   +  SLV    GES       
Sbjct: 984  EDER------------------QQMQEIGQFHLGDMVNVFRHGSLVMQNLGESSTPTLGC 1025

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK----- 1168
            V++GTV G++G +         +F  ++E  +      +   +H  +RS    +K     
Sbjct: 1026 VLFGTVSGAIGLVTQIPVT-FYEFLRNMEDRLNSVIKSVGKIEHNFWRSFNTELKIEQCE 1084

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
              IDGDL E F  L+ D   ++A  L    G  +KK
Sbjct: 1085 GFIDGDLIESFLDLNHDKMAEVAMGLMIDDGSGMKK 1120


>gi|307186138|gb|EFN71863.1| DNA damage-binding protein 1 [Camponotus floridanus]
          Length = 1136

 Score =  215 bits (548), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 288/1242 (23%), Positives = 509/1242 (40%), Gaps = 169/1242 (13%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT + A + GNF+      +++A+   LE  L+ PE    +  L    I+G I
Sbjct: 5    YIVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEG---LRPLKEVGIYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              +  FR    +KD + + + S   +ILE         +  K H     + G +    G 
Sbjct: 62   AVIKFFRPPHEKKDLLFLLTTSYNAMILECMGEGEDIEIITKAHGNVADRIG-KASETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DPK R + +   +    +  L++D       S  ++  +   + +       G  N
Sbjct: 121  KAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFL-----HGCTN 175

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTV 237
            P    I        QD  G+     + NL   E           W  + V+  A M++ V
Sbjct: 176  PTLILIH-------QDINGRHVKTHEINLREKEFS------KIPWRQDNVEREAMMVIPV 222

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
            P       G ++  +  ++Y + G   V AV+P     P  +   I   A    + L  +
Sbjct: 223  PS---PICGAIIIGQESILYHD-GTTYV-AVVP-----PIIKQSTITCYAKVDNQGL-RY 271

Query: 298  LLQTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            LL    G +F + LE +      + V +LK++    I +   +  L +G ++  S  G+ 
Sbjct: 272  LLGDMAGHLFMLFLELEKKPDGTQVVKDLKVELLGEISIPECITYLDNGVIYVGSRLGDS 331

Query: 353  ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
             L +        D   S    MET                        +L PI+DM + +
Sbjct: 332  QLIKLI---TKADENGSYCVPMET----------------------FTNLAPIVDMAVVD 366

Query: 413  LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +K      FD  +
Sbjct: 367  LERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGI-KGMWALKVG-GGNFDNTL 424

Query: 473  VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
            V+SF   T +L++ GE VEE    GF+    +     + +D  +Q+ P+  R I  + + 
Sbjct: 425  VLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISHESKM 484

Query: 531  -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
             ++EW    KRTI  V  N  QV+ A +G +L Y E+    Q++      +  +VACLDI
Sbjct: 485  VVSEWEPQNKRTISVVACNGTQVLCA-TGNDLFYMEIS-CNQIVPKGFATLQHEVACLDI 542

Query: 590  ASVPEGRKRSRFLAVGSY-DNTIRILSLD--PDDCMQILSVQSVSSPPESLLFLEVQASV 646
            + + +G   ++ +AVG + D ++RIL+L    +   ++L  + +   P S+L    + + 
Sbjct: 543  SPL-DGVNEAKIVAVGLWTDISVRILTLPGLEEINKELLGGEII---PRSILMTCFEGNT 598

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
                        +L   L +G ++   +    G LSD +   LG +P  L +        
Sbjct: 599  ------------YLLCALGDGSMYYFTLYKQNGVLSDKKRVTLGTQPTVLRTFRSLSTTN 646

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
            +   S RP + Y    + + + ++ + + +  S +++   + +     + + + TI+ + 
Sbjct: 647  VFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEI- 705

Query: 767  ETFNETALPLRYTPRRFVLQPKKK------LMVIIETDQGALTAEEREAAKKECFEAAGM 820
            +  +   +PL  +PRR   Q   +      + V ++   G        + +     +   
Sbjct: 706  QKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDVQESSGVSIVRHSASTQAASLSSGIA 765

Query: 821  GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
              N        E G +   ++ L  +Q+ +             VL   +        L  
Sbjct: 766  SHNKPSGHTASEIGQEIEVHNLLIIDQHTF------------EVLHAHT--------LMP 805

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
             E A S+ +     ++  +   VGTA     +  PK     G I ++ +  +GK  ++  
Sbjct: 806  TEYALSLISTRL-GEDSTSYYVVGTAFINPDETEPK----MGRILLFHW-SDGKLSQVAE 859

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRI 997
            K +++G   +L +F G+LLA I   +RL++   ++ LR  E   F N I + + T  D +
Sbjct: 860  K-EIKGSCYSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKSDFV 917

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             VGD+  S    +Y+  E      A D  P W+T+   +D DT  GA+   N++  +   
Sbjct: 918  LVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFICQKDS 977

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG-GES--- 1113
              + E E                    +M+E+ QFH+GD+V   +  SLV    GES   
Sbjct: 978  AATSEDER------------------QQMQEVGQFHLGDMVNVFRHGSLVMQNLGESSTP 1019

Query: 1114 ----VIYGTVMGSLG--AMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPV 1167
                V++GTV G++G    + F      +F  +LE  +      +   +H  +RS    +
Sbjct: 1020 TQGCVLFGTVSGAIGLVTQIPFGF---YEFLRNLEDKLTSVIKSVGKIEHNFWRSFKTDL 1076

Query: 1168 K-----DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            K       IDGDL E F  LS D   ++A  L    G  +KK
Sbjct: 1077 KIEQCEGFIDGDLIESFLDLSHDKMAEVAMGLMMDDGSGMKK 1118


>gi|224050582|ref|XP_002191856.1| PREDICTED: DNA damage-binding protein 1 [Taeniopygia guttata]
          Length = 1140

 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 277/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G  
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKT 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  + +  D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  +          ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQV---------IDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + +
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPH 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE   +GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+ G  L Y E+    +L ++   EM  
Sbjct: 479  VSQEPKSLVSEWKEPNGKNISVASCNSNQVVVAV-GRALYYLEI-RPQELRQISCTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   + + TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLM------VIIETDQGALTAEEREAAKKE 813
             TI+ + +  +   +PL  +PR+   Q   +        + ++   G  TA    A+ + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQA 760

Query: 814  CFEAAGMGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
               +    +  + +    E   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL------------ 808

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++ +  +G
Sbjct: 809  --------QNEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFHY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ L + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+   H+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLSHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKR 1122


>gi|270346571|pdb|3I7H|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Hbx
 gi|270346573|pdb|3I7K|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Whx
 gi|270346575|pdb|3I7L|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Ddb2
 gi|270346577|pdb|3I7N|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdtc1
 gi|270346579|pdb|3I7O|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Iqwd1
 gi|270346581|pdb|3I7P|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr40a
 gi|270346583|pdb|3I89|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr22
 gi|270346585|pdb|3I8C|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr21a
 gi|270346587|pdb|3I8E|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr42a
 gi|270346588|pdb|3I8E|B Chain B, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr42a
          Length = 1143

 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 275/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 6    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 64

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 65   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 124

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 125  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 171

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 172  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 222

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 223  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 276

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 277  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 327

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 328  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 362

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 363  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 421

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E    +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 422  RETYDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 481

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 482  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 539

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 540  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 596

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 597  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 644

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 645  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 704

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 705  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 763

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 764  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 812

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 813  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 859

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ +R   N       + + 
Sbjct: 860  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVRTECNHYNNIMALYLK 918

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 919  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 978

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 979  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1020

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1021 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1078

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1079 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1125


>gi|221046721|pdb|3EI4|A Chain A, Structure Of The Hsddb1-Hsddb2 Complex
 gi|221046723|pdb|3EI4|C Chain C, Structure Of The Hsddb1-Hsddb2 Complex
 gi|221046725|pdb|3EI4|E Chain E, Structure Of The Hsddb1-Hsddb2 Complex
          Length = 1158

 Score =  215 bits (547), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 275/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 21   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 79

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 80   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 139

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 140  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 186

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 187  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 237

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 238  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 291

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 292  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 342

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 343  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 377

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 378  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 436

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E    +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 437  RETYDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 496

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 497  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 554

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 555  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 611

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 612  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 659

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 660  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 719

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 720  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 778

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 779  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 827

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 828  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 874

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ +R   N       + + 
Sbjct: 875  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVRTECNHYNNIMALYLK 933

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 934  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 993

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 994  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1035

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1036 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1093

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1094 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1140


>gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum Group E Complementing protein [Homo sapiens]
          Length = 1140

 Score =  215 bits (547), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 275/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++    M  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTGMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ +R   N       + + 
Sbjct: 857  K-LQTVAEKEVKGDVYSMVEFNGKLLASINSTVRLYEWTTEKDVRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|81868411|sp|Q9ESW0.1|DDB1_RAT RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|9843869|emb|CAB89874.2| damage-specific DNA binding protein 1 [Rattus norvegicus]
          Length = 1140

 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 274/1247 (21%), Positives = 505/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDINLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+    Q   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDS---QPVKLNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPRAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLD+  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDVTPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANTSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             T+  + +  +   +P+  +PR+   Q   +   ++ T     D    T   R +A  + 
Sbjct: 702  GTMNEI-QKLHIRTVPIYESPRKICYQEVSQCFGVLSTRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSAAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++   G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY--SG 855

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
              L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 856  GKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV+ GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLLGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|90108797|pdb|2B5L|A Chain A, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
            Protein
 gi|90108798|pdb|2B5L|B Chain B, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
            Protein
 gi|90108801|pdb|2B5M|A Chain A, Crystal Structure Of Ddb1
 gi|116667897|pdb|2HYE|A Chain A, Crystal Structure Of The Ddb1-cul4a-rbx1-sv5v Complex
 gi|1136228|gb|AAA88883.1| UV-damaged DNA binding factor [Homo sapiens]
 gi|1588524|prf||2208446A xeroderma pigmentosum group E-binding factor
          Length = 1140

 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 275/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E    +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETYDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ +R   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|327278830|ref|XP_003224163.1| PREDICTED: DNA damage-binding protein 1-like [Anolis carolinensis]
          Length = 1140

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 276/1247 (22%), Positives = 509/1247 (40%), Gaps = 175/1247 (14%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y +T Q+PT + + + G+F+  +   +++A+   LE+      G +  +    ++G I  
Sbjct: 5    YVVTAQKPTAVNSCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKIAV 63

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIVPG 117
            +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+  
Sbjct: 64   MELFRPKGENKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG- 122

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
                +DP+ R + +   +    V  L R+       +  LE  +          ID  F 
Sbjct: 123  ---IIDPECRMIGLRLYDGLFKVIPLERENKELKAFNIRLEELQV---------IDVKF- 169

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVT 236
              ++           QD  G+     + +L   E + G       W  E V+  A+M++ 
Sbjct: 170  --LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIA 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAA 287
            VP   +   G ++  +  + Y N         P ++    V   R D    R +L     
Sbjct: 222  VP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL----- 273

Query: 288  THRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
               +  LF  LL+ E      V+L+       +L+++      +   +  L +G +F  S
Sbjct: 274  GDMEGRLFMLLLEKEEQMDGGVSLK-------DLRVELLGETSIAECLTYLDNGVVFVGS 326

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
              G+  L +   +  D + + S    MET                        +L PI+D
Sbjct: 327  RLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPIVD 361

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
            M + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + + E
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPHHE 420

Query: 468  FDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
             D  +V+SF   T VL + GE VEE   +GF+D   +     +    L+Q+  + +R + 
Sbjct: 421  TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVT 480

Query: 527  EDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV 584
            ++ +  ++EW+ P  + I     N  QVV+A+  G ++Y+      +L ++   EM  +V
Sbjct: 481  QEPKALVSEWKEPNGKNISVASCNSSQVVVAV--GRVLYYLEIHPQELKQISCTEMEHEV 538

Query: 585  ACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLE 641
            ACLDI  + +    S   A+G + D + RIL L   D +  ++L  + +   P S+L   
Sbjct: 539  ACLDITPLGDASGMSPLCAIGLWTDISARILKLPSFDLLHKEMLGGEII---PRSILMTT 595

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
             + S        H    +L   L +G LF   +++ TG LSD +   LG +P  L +   
Sbjct: 596  FENS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRS 643

Query: 702  GGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFT 761
                 +   S RP + Y    + + + ++ + + Y    +SD   + +     + L + T
Sbjct: 644  LSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGT 703

Query: 762  IERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFE 816
            I+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  +   
Sbjct: 704  IDEI-QKLHIRTVPLSESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALS 762

Query: 817  AAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT 873
            ++        +     +   G++   ++ L  +Q+ +    + +++              
Sbjct: 763  SSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ------------- 809

Query: 874  CLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGL--QFWPKRNIVAGYIHIYRFVEEG 931
                   NE A S+ +     K+  T   VGTA     +  PK+    G I ++ +  +G
Sbjct: 810  -------NEYALSLVSCKL-GKDPNTYFIVGTAMVYPDEAEPKQ----GRIVVFHY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYVK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E   FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEFGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDVQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKR 1122


>gi|440893607|gb|ELR46310.1| DNA damage-binding protein 1 [Bos grunniens mutus]
          Length = 1143

 Score =  214 bits (545), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 277/1250 (22%), Positives = 509/1250 (40%), Gaps = 174/1250 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RI  L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGMSPLCAIGLWTDISARIAKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY-- 1160
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  Y  
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSLYPS 1075

Query: 1161 -RSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             RS +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 QRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1125


>gi|45383688|ref|NP_989547.1| DNA damage-binding protein 1 [Gallus gallus]
 gi|82098863|sp|Q805F9.1|DDB1_CHICK RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=Damage-specific DNA-binding
            protein 1; AltName: Full=UV-damaged DNA-binding factor
 gi|28375613|dbj|BAC56999.1| damaged-DNA binding protein DDB p127 subunit [Gallus gallus]
 gi|53130071|emb|CAG31438.1| hypothetical protein RCJMB04_6h2 [Gallus gallus]
          Length = 1140

 Score =  214 bits (544), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 276/1247 (22%), Positives = 510/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G  
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKT 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  + +  D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQNGDNIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+R+       +  LE  +          ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQV---------IDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + +
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDSH 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE   +GF+D   +     +    L+Q+  + +R 
Sbjct: 419  REMDNMLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+ G  L Y E+    +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPNGKNISVASCNSNQVVVAV-GRALYYLEI-RPQELRQINCTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDTNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   + + TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLM------VIIETDQGALTAEEREAAKKE 813
             TI+ + +  +   +PL  +PR+   Q   +        + ++   G  TA    A+ + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQA 760

Query: 814  CFEAAGMGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
               +    +  + +    E   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL------------ 808

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++ +  +G
Sbjct: 809  --------QNEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFHY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ L + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+   H+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLSHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKR 1122


>gi|348560393|ref|XP_003465998.1| PREDICTED: DNA damage-binding protein 1-like [Cavia porcellus]
          Length = 1140

 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 278/1248 (22%), Positives = 512/1248 (41%), Gaps = 173/1248 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGENKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I         G
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YG 172

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR-KWS-EPVDNGANM 233
               P    +        QD  G       +++  YE+ L     S+  W  E V+  A+M
Sbjct: 173  CQAPTICFVY-------QDPQG-------RHVKTYEVSLREKEFSKGPWKQENVEAEASM 218

Query: 234  LVTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIV 284
            ++ VP   +   G ++  +  + Y N         P ++    V   R D    R +L  
Sbjct: 219  VIAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL-- 273

Query: 285  SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
                  +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F
Sbjct: 274  ---GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVF 323

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
              S  G+  L +   +  D + + S    MET                        +L P
Sbjct: 324  VGSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGP 358

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            I+DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + 
Sbjct: 359  IVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDP 417

Query: 465  NDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
            + E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R
Sbjct: 418  SRETDDTLVLSFVGQTRVLMLNGEEVEETELVGFVDDQQTFFCGNVAHQQLIQITSASVR 477

Query: 524  HIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMS 581
             + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM 
Sbjct: 478  LVSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEME 535

Query: 582  GDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLL 638
             +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L
Sbjct: 536  HEVACLDITPLGDSCGLSPLCAIGLWTDISARILQLPSFELLHKEMLGGEII---PRSIL 592

Query: 639  FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
                ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L +
Sbjct: 593  MTTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRT 640

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
                    +   S RP + Y    + + + ++ + + Y    +SD   + +     + L 
Sbjct: 641  FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLT 700

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKE 813
            + TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  +
Sbjct: 701  IGTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTVLRPSASTQ 759

Query: 814  CFEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSA 870
               ++        +     +   G++   ++ L  +Q+ +    + +++           
Sbjct: 760  ALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ---------- 809

Query: 871  NTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEE 930
                      NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +
Sbjct: 810  ----------NEYALSLVSCRL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SD 855

Query: 931  GKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI 990
            GK L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + +
Sbjct: 856  GK-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYL 914

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N+
Sbjct: 915  KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNL 974

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV--- 1107
            +  +  +D +   +E+                   ++E+  FH+G+ V      SLV   
Sbjct: 975  FVCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQN 1016

Query: 1108 ------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
                  P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +R
Sbjct: 1017 LGETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWR 1074

Query: 1162 SAYFPVKD-----VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            S +   K       IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1075 SFHTERKTEQATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|193644722|ref|XP_001942922.1| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
          Length = 1156

 Score =  213 bits (542), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 292/1249 (23%), Positives = 507/1249 (40%), Gaps = 166/1249 (13%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
             Y++T  +PT ++ +I+ NF+      ++VAR   +++      G ++ +    ++G I 
Sbjct: 6    FYTVTAHKPTAVVTSISANFTSPTDRNLLVARFNRIDISLVTEEG-LQPIKEIALYGKIE 64

Query: 63   SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSK----NVFDKIHQETFGKSGCRRIVPGQ 118
             +  FR     KD + V +     +ILE   ++    ++  K H     + G    + G 
Sbjct: 65   IMKVFRPKHKDKDLLFVVTARYNTMILECVQTESGDIDIITKAHGNISDQIGKISEI-GA 123

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC--GF 176
               +DP  R  +IG      L  ++  D    L      +A+        +  ID   G 
Sbjct: 124  MAVIDPSAR--VIGLKLYDGLFKIIPLDKEGEL------KAYCLRMEEVEVQDIDFLYGC 175

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLV 235
             NP    I        QD+ G+     + ++   E       V   W  E V+  A+M++
Sbjct: 176  ANPTIIIIH-------QDTMGRHIKAKELSIKDKEF------VKTPWKQENVETEASMII 222

Query: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPA-ERGVLIVSAATHRQKTL 294
             VP   +   G ++     V+Y N       A+ P     P  ++  ++  A    + T 
Sbjct: 223  PVP---EPLCGAIIIGRESVLYHNGS--SFIAISP-----PVIKQSTIVCYARIDPEGTR 272

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIK-----YFDTIPVTASMCVLKSGYLFAASEF 349
            +  LL    G +F + L ++       KIK         I +  S+  L +  ++ AS  
Sbjct: 273  Y--LLGDMAGHLFMLLLNYEKNPDGTFKIKDPKVDLLGEISIPESLTYLDNKIIYVASRV 330

Query: 350  GNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR 409
            G+  L +   +   PD   S  T+++T                        +L PI+DM 
Sbjct: 331  GDSQLIK---LNKKPDQFGSHITVLDT----------------------FMNLGPIVDMC 365

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
            + +L  +   Q+ T  G     SLRI+R G+ + E+A   L G+   +W ++   +   D
Sbjct: 366  VIDLERQGQGQVVTCSGAYKEGSLRIIRNGIGIQEVATIDLVGI-KGMWPLRITTDSLLD 424

Query: 470  AYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
              +V+SF   + VL+  GE VEE+   GF     +       D+ ++Q+  + +R I  +
Sbjct: 425  DTLVLSFVGHSRVLAYSGEEVEEIDLEGFQSELQTFYCGNTSDNKMVQITSASVRLICLE 484

Query: 529  GR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVAC 586
             +  ++EW  P  ++I  V  N  Q V A +G  L Y E+  T ++ +     +  +V+C
Sbjct: 485  SKCLVSEWNVPDGKSINVVSCNGHQAVCA-TGNSLYYIEIG-TDKVDQKGFITLEHEVSC 542

Query: 587  LDIASVP-EGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP------PESLL 638
            LD+ S   E  K S  +AVG + D +++IL L PD       V+ V  P      P S+L
Sbjct: 543  LDVCSFKNEFYKNSSLVAVGLWMDISVKILQL-PD------FVELVREPLGEEIIPRSIL 595

Query: 639  FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
             +  +         D     +L   L +G L    ++   G LSD R   LG +P  +  
Sbjct: 596  MVTFE-------NID-----YLLCALGDGSLCYFHLNPENGVLSDKRKVNLGTQPTLIRK 643

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
                   ++   S  P + Y    + + + ++   + +  S ++    + +      A+ 
Sbjct: 644  FQSLATTSVFACSDHPTVIYSSNNKLIFSNVNLRKVNHMCSLNTKSYPDSLAMATDTAII 703

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKK----LMVIIETDQGALTAEEREAAKKEC 814
            + TI+ + +    T +PL   PRR   Q   K    + + I+  +G      R +A    
Sbjct: 704  IGTIDEMQKLHIRT-IPLGEAPRRIAHQESSKSFGIITMRIDVHEGINLVPARPSASTSA 762

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
               +G   N   N     N +      PLS E YG      +  +  + VLD  +     
Sbjct: 763  QNISGAINNRMPNNASAVNSNQ----GPLSSE-YGL-----EVEIHNMLVLDQNTFEVLH 812

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
              +L  NE A SI +    D +  T   +GTA  +     ++   G I I+ + +    L
Sbjct: 813  AHQLNSNEYALSIISAKLGD-DPATYYILGTA--VVNPEDQDPKLGRILIFHWDDSSSKL 869

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTY 993
              + + +V+G    + +F G+LLA +   +RL++   ++ LR  E   F N + + + T 
Sbjct: 870  TPITEKEVKGACYGMAEFNGKLLAAVNCTVRLFEWTAEKELR-LECSHFNNIVALFVKTK 928

Query: 994  RDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
             D I  GD+  S    +Y+  E      A D  P+W TA   ID D   GA+   N++ +
Sbjct: 929  GDFIVCGDLMRSLTLLQYKTMEGSFEEIARDYNPKWSTAIEIIDDDVFLGAENDKNLFII 988

Query: 1054 RLPQDV-SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL------ 1106
                 + SDE                   A ++++EI QFH GD++   +  SL      
Sbjct: 989  HKDSTLTSDE-------------------ARHQLQEIGQFHCGDLINVFRHGSLVMQHFT 1029

Query: 1107 -----VPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
                 V GG   ++YGT  G+LG +   + +   DF S LE  +      +   +H  +R
Sbjct: 1030 DTYVSVQGG---ILYGTCSGALGLVTQLTPK-MFDFLSDLEKSLATVVKGVGKINHQFWR 1085

Query: 1162 SAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKL 1205
            S +      P +  +DGDL E F  LS      + D L        KK+
Sbjct: 1086 SYHTEIRTEPSESFVDGDLIESFLDLSKREMIAVVDALQGAYDHEFKKI 1134


>gi|349605921|gb|AEQ01001.1| Splicing factor 3B subunit 3-like protein, partial [Equus caballus]
          Length = 162

 Score =  213 bits (542), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 91/159 (57%), Positives = 126/159 (79%)

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
            VRLP + +DE++EDPTG K  W++G LNGA  K E I+ +HVG+ V SLQK +L+PGG E
Sbjct: 1    VRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSE 60

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
            S++Y T+ G +G ++ F+S +D DFF H+EMH+R EHPPLCGRDH+++RS YFPVK+VID
Sbjct: 61   SLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVID 120

Query: 1173 GDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            GDLCEQF ++  + Q+ +++ELDRTP E+ KKLE+IR +
Sbjct: 121  GDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTR 159


>gi|301632350|ref|XP_002945249.1| PREDICTED: splicing factor 3B subunit 3-like [Xenopus (Silurana)
           tropicalis]
          Length = 196

 Score =  213 bits (542), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 109/200 (54%), Positives = 145/200 (72%), Gaps = 11/200 (5%)

Query: 566 VDMTGQLLE-VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQI 624
           +D +GQL E  E+ EMS DV C+ +A+VP G +RSRFLAVG  DNT+RI+SLDP DC+Q 
Sbjct: 1   MDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQP 60

Query: 625 LSVQSVSSPPESLLFLEVQASVGGEDGADHPAS------LFLNAGLQNGVLFRTVVDMVT 678
           LS+Q++ + PE+L  +E+    GG +  D          L+LN GLQNGVL RTV+D VT
Sbjct: 61  LSMQALPAQPEALCIVEM----GGAERQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVT 116

Query: 679 GQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAA 738
           G LSD+R+R+LG RP KLF V + G+ A+L +SSR WL Y ++ RF LTPLSYETLEYA+
Sbjct: 117 GDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYAS 176

Query: 739 SFSSDQCVEGVVSVAGNALR 758
            F+S+QC EG+V+++ N LR
Sbjct: 177 GFASEQCPEGIVAISTNTLR 196


>gi|5353754|gb|AAD42230.1|AF159853_1 damage-specific DNA binding protein 1 [Mus musculus]
          Length = 1140

 Score =  213 bits (542), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 275/1247 (22%), Positives = 509/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   L++      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLKIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VT +       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTPK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ +  
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPG 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               +            +S +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFE------------SSRYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSXNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI------IETDQGALTAEEREAAKKE 813
             TI+ + +  +   +PL  +PR+   Q   +   +      ++   G  TA    A+ + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQA 760

Query: 814  CFEAAGMGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
               +    +  + +    E   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GEASTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|74178494|dbj|BAE32502.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score =  213 bits (541), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 279/1247 (22%), Positives = 508/1247 (40%), Gaps = 171/1247 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ +  
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPG 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H     L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----CLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI------IETDQGALTAEEREAAKKE 813
             TI+ + +    T  PL  +PR+   Q   +   +      ++   G  TA    A+ + 
Sbjct: 702  GTIDEIQKLHIRTD-PLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQA 760

Query: 814  CFEAAGMGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
               +    +  + +    E   G++   ++ L   Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIGQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKLGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS
Sbjct: 1018 GEASTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +      P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1122


>gi|119594339|gb|EAW73933.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_a [Homo
            sapiens]
          Length = 1094

 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 263/1168 (22%), Positives = 481/1168 (41%), Gaps = 165/1168 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL------------ 808

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 809  --------QNEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFS 1130
                 P  G SV++GTV G +G + + S
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSLS 1044


>gi|297267724|ref|XP_001082958.2| PREDICTED: DNA damage-binding protein 1 [Macaca mulatta]
          Length = 1092

 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 261/1168 (22%), Positives = 479/1168 (41%), Gaps = 165/1168 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               +            +S +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFE------------SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL------------ 808

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 809  --------QNEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFS 1130
                 P  G SV++GTV G +G + + S
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSLS 1044


>gi|221040048|dbj|BAH11787.1| unnamed protein product [Homo sapiens]
          Length = 1092

 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 261/1168 (22%), Positives = 479/1168 (41%), Gaps = 165/1168 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE          +  ID  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE---------ELHVIDVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPHGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               +            +S +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFE------------SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL------------ 808

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 809  --------QNEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V      SLV    
Sbjct: 976  VCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNL 1017

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFS 1130
                 P  G SV++GTV G +G + + S
Sbjct: 1018 GETSTPTQG-SVLFGTVNGMIGLVTSLS 1044


>gi|2911067|emb|CAA17529.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
 gi|7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
          Length = 1102

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 283/1254 (22%), Positives = 506/1254 (40%), Gaps = 204/1254 (16%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
            ++ Y++T Q+PT +  +  GNF+  +   ++VA+   +E  LL P+    ++T++   ++
Sbjct: 3    VWNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQG---LQTILDVPLY 59

Query: 59   GAIRSLAQFR----LTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK-------IHQETFG 107
            G I ++  FR    +      ++ +        +L+     +VF         + Q   G
Sbjct: 60   GRIATMELFRPHVSIVFLLNTFLCLRVKHKTFCLLQLKDINSVFFNGIMSPLSLLQGAMG 119

Query: 108  KSGCRRIVP---GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHT 164
                R   P   GQ   +DP  R  +IG      L  V+  D   +L  +  +   +   
Sbjct: 120  DVSDRIGRPTDNGQIGIIDPDCR--VIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQV 177

Query: 165  IVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLG-LNHVSRKW 223
            +         G   P  A +  D  +A             +++  YE+ L   N V   W
Sbjct: 178  LDIKFL---YGCTKPTIAVLYQDNKDA-------------RHVKTYEVSLKDKNFVEGPW 221

Query: 224  SEP-VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVL 282
            S+  +DNGA++L+ VP       GVL+  E  ++Y +    +    IP R  +    G +
Sbjct: 222  SQNNLDNGADLLIPVPSP---LCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRV 275

Query: 283  IVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGY 342
             +  +         +LL    G I  + + H+ E V+ LKI+      + +S+  L +  
Sbjct: 276  DLDGSR--------YLLGDHAGLIHLLVITHEKEKVTGLKIELLGETSIASSISYLDNAV 327

Query: 343  LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            +F  S +G+  L +   +   PD + S   ++E                      +  +L
Sbjct: 328  VFVGSSYGDSQLIK---LNLQPDAKGSYVEILE----------------------KYVNL 362

Query: 403  MPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
             PI+D  + +L  +   Q+ T  G     SLRI+R G+ ++E A  +L G+   +W++K 
Sbjct: 363  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLKS 421

Query: 463  NVNDEFDAYIVVSFNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPS 520
            ++++ FD ++VVSF + T  L ++I + +EE    GFL    +L       + L+QV  +
Sbjct: 422  SIDEAFDTFLVVSFISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQVTSN 481

Query: 521  GIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH 578
             +R +    R   N+W  P   ++    +N  QV++A  GG L+Y E+   G L EV+  
Sbjct: 482  SVRLVSSTTRELRNKWDAPAGFSVNVATANASQVLLATGGGHLVYLEIG-DGTLTEVKHV 540

Query: 579  EMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PE 635
             +  +V+CLDI  + +    S+  AVG + D ++RI  L PD  + +++ + +     P 
Sbjct: 541  LLEYEVSCLDINPIGDNPNYSQLAAVGMWTDISVRIFVL-PD--LTLITKEELGGEIIPR 597

Query: 636  SLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPK 695
            S+L    +               +L   L +G L    +D   G+L D +   LG RP  
Sbjct: 598  SVLLCAFEGIS------------YLLCALGDGHLLNFQLDTSCGKLRDRKKVSLGTRPIT 645

Query: 696  LFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGN 755
            L +        +   S RP + Y +  + L + ++ + + +   F+S    + +      
Sbjct: 646  LRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREG 705

Query: 756  ALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECF 815
             L + TI+ + +  +   +P+    RR   Q + +    I   +   +AEE E+      
Sbjct: 706  ELTIGTIDDI-QKLHIRTIPIGEHARRICHQEQTRTFA-ISCLRNEPSAEESESHFVRLL 763

Query: 816  EAAGMGENGNGNMDQMENG---------DDENKYDPLSDEQYGYPKAESDKWVSCIRVLD 866
            +A       +  +D  E G         DD+N Y  +    Y  P+ E++     I V  
Sbjct: 764  DAQSFEFLSSYPLDAFECGCSILSCSFTDDKNVYYCVG-TAYVLPE-ENEPTKGRILVFI 821

Query: 867  PRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYR 926
                    + E +   A +S+   N      G LLA    K              I +Y+
Sbjct: 822  VEEGRLQLITEKETKGAVYSLNAFN------GKLLASINQK--------------IQLYK 861

Query: 927  FVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNT 986
            ++        L            C   G +LA       LY                   
Sbjct: 862  WMLRDDGTRELQSE---------CGHHGHILA-------LY------------------- 886

Query: 987  IVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADK 1046
               + T  D I VGD+ +S     Y+ +E  +   A D    W+TA   ++ D   G D 
Sbjct: 887  ---VQTRGDFIAVGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDIYLGTDN 943

Query: 1047 FGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL 1106
              NI+ V+                  K  +G  +    +ME + ++H+G+ V   +  SL
Sbjct: 944  CFNIFTVK------------------KNNEGATDEERARMEVVGEYHIGEFVNRFRHGSL 985

Query: 1107 VP-------GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMA 1159
            V        G   +VI+GTV G +G ++A   ++   F   L+  +R+    + G  H  
Sbjct: 986  VMKLPDSDIGQIPTVIFGTVSGMIG-VIASLPQEQYAFLEKLQTSLRKVIKGVGGLSHEQ 1044

Query: 1160 YRS-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            +RS          K  +DGDL E F  LS     +I+  +D    E+ K++EE+
Sbjct: 1045 WRSFNNEKRTAEAKGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEEL 1098


>gi|307205760|gb|EFN83990.1| DNA damage-binding protein 1 [Harpegnathos saltator]
          Length = 1138

 Score =  210 bits (534), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 285/1240 (22%), Positives = 513/1240 (41%), Gaps = 163/1240 (13%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT + A + GNF+      +++A+   LE  L+ PE    +  L    I+G I
Sbjct: 5    YVVTAHKPTAVNACVTGNFTSPTDLNLILAKNVRLEIYLVTPEG---LRPLKEVGIYGRI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              +  FR    +KD + + +     +ILE         +  K H     + G +    G 
Sbjct: 62   AVVKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEDIEIITKAHGNVADRIG-KASETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DPK R + +   +    +  L++D       S  ++  +   + +       G  N
Sbjct: 121  KAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFL-----HGCAN 175

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTV 237
            P    I        QD  G+     + +L   E       V   W  + V+  A M++ V
Sbjct: 176  PTLILIH-------QDINGRHVKTHEISLRDKEF------VKIPWRQDNVEREAMMVIPV 222

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
            P       G ++  +  ++Y +       AV+P     P  +   I   A    + L  +
Sbjct: 223  PS---PICGAIIIGQESILYHDG--TTYIAVVP-----PIIKQSTITCYAKVDNQGL-RY 271

Query: 298  LLQTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            LL    G +F + LE +      + V +LK++    I +   +  L +G +F  S  G+ 
Sbjct: 272  LLGDMAGHLFMLFLEQEKKPDGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRLGDS 331

Query: 353  ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
             L +        D   S    MET                        +L PI+DM + +
Sbjct: 332  QLIKLI---TKADENGSYCVPMET----------------------FTNLAPIVDMAVVD 366

Query: 413  LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +K      FD  +
Sbjct: 367  LERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGI-KGMWALKVG-GGNFDNTL 424

Query: 473  VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI 531
            V+SF   T +L++ GE VEE    GF+    +     + +D  +Q+ P+  R I  + +I
Sbjct: 425  VLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISHETKI 484

Query: 532  --NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
              +EW    KRTI  V  N  QV+ A +G +L Y E+ +  Q++      +  +VACLDI
Sbjct: 485  VVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYMEI-ICNQIVPKGFATLQHEVACLDI 542

Query: 590  ASVPEGRKRSRFLAVGSY-DNTIRILSLD--PDDCMQILSVQSVSSPPESLLFLEVQASV 646
            + + +G   ++ +AVG + D ++RIL+L    +   ++L  + +   P S+L    + + 
Sbjct: 543  SPL-DGISEAKIVAVGLWTDISVRILTLPGLEEINKELLGGEII---PRSILMTCFEGNT 598

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
                        +L   L +G ++   +    G LSD +   LG +P  L +        
Sbjct: 599  ------------YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLSTTN 646

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
            +   S RP + Y    + + + ++ + + +  S +++   + +     + + + TI+ + 
Sbjct: 647  VFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEI- 705

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
            +  +   +PL  +PRR   Q   +   +I               + +  E++G+    + 
Sbjct: 706  QKLHIRTVPLGESPRRIAYQESSQTFGVI-------------TMRVDVQESSGVSIVRH- 751

Query: 827  NMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSC--IRVLDPRSANTTCLLELQDNEAA 884
            +          + +    ++  G+  +E  + +    + ++D  +        L   E A
Sbjct: 752  SASTQAASTSSSSHIASHNKPSGHTASEIGQEIEVHNLLIIDQHTFEVLHAHTLMPTEYA 811

Query: 885  FSICTVNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
             S+ +     ++  +   VGTA     +  PK     G I +Y +  +GK  ++  K ++
Sbjct: 812  LSLISTRL-GEDPTSYFVVGTALINPDETEPK----MGRILLYHW-SDGKLTQVAEK-EI 864

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGD 1001
            +G   +L +F G+LLA I   +RL++   ++ LR  E   F N I + + T  D + VGD
Sbjct: 865  KGSCYSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFVLVGD 923

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +  S    +Y+  E      A D  P W+T+   +D DT  GA+   N++  +     + 
Sbjct: 924  LMRSLTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFVCQKDSAATS 983

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG-GES------- 1113
            E E                    +M+E+ QFH+GD+V   +  SLV    GES       
Sbjct: 984  EDER------------------QQMQEVGQFHLGDMVNVFRHGSLVMQNLGESSTPTLGC 1025

Query: 1114 VIYGTVMGSLGAM----LAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK- 1168
            V++GTV G++G +     AF      +F  +LE  +      +   +H  +RS    +K 
Sbjct: 1026 VLFGTVSGAIGLVTQIPFAF-----YEFLRNLEDRLNSVIKSVGKIEHNFWRSFNTELKI 1080

Query: 1169 ----DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
                  IDGDL E F  L+ D   ++A  L    G  +KK
Sbjct: 1081 EQCEGFIDGDLIESFLDLNHDKMAEVAMGLMIDDGSGMKK 1120


>gi|53127015|emb|CAG31003.1| hypothetical protein RCJMB04_1i13 [Gallus gallus]
          Length = 135

 Score =  209 bits (531), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 101/134 (75%), Positives = 117/134 (87%), Gaps = 1/134 (0%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           M+LY+LTLQ+ TGI  AI+GNFSGTK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG
Sbjct: 1   MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
            IRSL  FRLTG  KDYIVVGSDS RIVILEY PSKNVF+KIHQETFGKSGCR+IV GQY
Sbjct: 61  VIRSLMAFRLTGGTKDYIVVGSDSRRIVILEYQPSKNVFEKIHQETFGKSGCRKIVSGQY 120

Query: 120 LAVDPKGRAVMIGA 133
           LAV+PKGRAVMI A
Sbjct: 121 LAVNPKGRAVMISA 134


>gi|330792580|ref|XP_003284366.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
 gi|325085712|gb|EGC39114.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
          Length = 1064

 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 280/1207 (23%), Positives = 522/1207 (43%), Gaps = 192/1207 (15%)

Query: 49   IETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIH---QE 104
            ++ +    I+G I  L  F   G ++DY+ + ++S +  IL Y+  K  +  K     ++
Sbjct: 6    LKPMFDVNIYGRISVLKLFS-AGGKQDYLFISTESFKFCILAYDSEKKEIVTKASGNAED 64

Query: 105  TFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHT 164
            T G    R    GQ   +DP GR + +   E   L+ ++N +      +++P++   ++T
Sbjct: 65   TIG----RPTEAGQLGIIDPDGRLIALHLYEG--LLKLINIEKG----LNNPIQKTAANT 114

Query: 165  IVYSICGIDCGF----DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVS 220
             +  +  +D  F      P  A +  D  +     T + + + Q      EL  G     
Sbjct: 115  RLEELQVMDMTFLYGCKIPTIAVLFKDTKDEKHIVTYEVSQKDQ------ELCPG----- 163

Query: 221  RKWSEP-VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAER 279
              WS+  V   ++MLV VP GG     VLV A+N + Y N G       IP    L  +R
Sbjct: 164  -PWSQSNVGVYSSMLVAVPLGG-----VLVVADNGITYMN-GRTTRSIAIPYTKFLAYDR 216

Query: 280  GVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLK 339
                V     R      +L    +G +  + L +  + V+ELK +      + +S+  L 
Sbjct: 217  ----VDKDGSR------YLFGDHFGRLSVLVLLNHQQRVTELKFETLGRTSIPSSISYLD 266

Query: 340  SGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQV 399
            SG +F  S  G+  L +      DP  ++  S L                       E  
Sbjct: 267  SGVVFIGSSSGDSQLIRLNT-EKDPATDSYISHL-----------------------ENF 302

Query: 400  ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
             ++ PI+D  + +  ++   QI T  G     +LR++R G+ ++E A+ +L GV   +W 
Sbjct: 303  TNIGPIVDFCLVDTEKQGQAQIVTCSGTYRDGTLRVIRNGIGIAEKALIELEGV-KGLWP 361

Query: 460  VKKN-----VNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPS--LAVSLIGDD 512
            +K+N     +N + D Y++VSF   T VL       E ++   LD+  S  L  ++  ++
Sbjct: 362  IKENDPSDPLNPK-DQYLIVSFIGYTKVLQFQGEEIEETEFEGLDSNSSTILCSNIDKEN 420

Query: 513  SLMQVHPSGIRHIR--EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG 570
             ++QV    I  I      R+++W++P    I  V SN+ Q+ +++ G  L YFE++   
Sbjct: 421  VIVQVTNQAINLINPITFKRVDQWKSPSGSPINLVSSNQSQIALSI-GKSLYYFEINEQS 479

Query: 571  QLLEVEKHEMSGDVACLDIASVPEGR-KRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQ 628
            ++  +++ E+  +++C+DI+ +      RS+  AVG + D T+R+  L     ++ +  +
Sbjct: 480  RIELIKEIELPHEISCIDISPLDSFMDSRSQICAVGLWTDITLRLFKL---PTLEEIHKE 536

Query: 629  SVSSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTG-QLSDSR 685
             +     P S+L +  +       G D     ++   L +G LF+  +D+    +L D R
Sbjct: 537  PLGGEIIPRSILMISFE-------GID-----YIFCSLGDGHLFKFKIDIANNWKLFDKR 584

Query: 686  SRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQC 745
               LG +P  L    +     +  LS RP + Y +  +   + ++ + +    SF+SD  
Sbjct: 585  KLTLGTQPIILKKFKLKNTINIFALSDRPTVIYSNNKKLFYSVVNLKEVTNVTSFNSDAF 644

Query: 746  VEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFV-LQPKKKLMVI-IETDQGALT 803
               +   + ++L + TI+ + +   +T        RR V L+      VI I+T++  ++
Sbjct: 645  PGSMAISSESSLIIGTIDEIQKLHIKTISLNGEMARRIVHLEEYSCYAVITIKTNEDIIS 704

Query: 804  AEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIR 863
                                         NG++    D + +E            VS +R
Sbjct: 705  G----------------------------NGENATTIDEVEEE------------VSYVR 724

Query: 864  VLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIH 923
            + D ++        L+  E  +S+ +  F D +  T LAVGT+  +   P R   +G + 
Sbjct: 725  LFDDQTFEPLSSFRLEHYEMGWSLTSTKF-DDDPCTYLAVGTSINI---PDRQ-TSGRVL 779

Query: 924  IYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL------GKKRLLRK 977
            ++  + E K L LL +       L L QF GRL+A +  + RLY +       K   +  
Sbjct: 780  LFN-INEAKKLVLLEEISFRSGVLYLHQFNGRLIAAV--LKRLYSIRYSYSKEKNCKVIS 836

Query: 978  CENKLFPNT-IVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI 1036
             EN    +T I+ + +    + VGD+ +S      + +   L   A +  P W+ +   I
Sbjct: 837  SENVHKGHTMILKLASRGHFMLVGDMMKSMSLLG-QSENGSLVQIAKNPQPIWIRSIAMI 895

Query: 1037 DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGD 1096
            + D   G++   N   V+   D ++E+E +                   ++ +  +H+G+
Sbjct: 896  NDDYFIGSETSNNFVVVKKNNDSTNELERE------------------LLDSVGHYHIGE 937

Query: 1097 VVTSLQKASLV--PGGGE----SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP 1150
             + S+   SLV  P        +++Y +V GS+G ++A  S++D +FFS L+  + +   
Sbjct: 938  SINSMLCGSLVRLPDSDAPPIPTILYASVNGSIG-VIASISKEDYEFFSKLQKGLNRVVN 996

Query: 1151 PLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKL 1205
             + G  H ++R+          ++ IDGDL E FP L ++   K+  +++ T  E LK++
Sbjct: 997  GIGGFTHESWRAFSNDHHTVESRNFIDGDLIEMFPDLKIESMAKVIQDMNVTLDETLKRI 1056

Query: 1206 EEIRNKI 1212
            E +   I
Sbjct: 1057 ESLMQYI 1063


>gi|391335522|ref|XP_003742140.1| PREDICTED: DNA damage-binding protein 1-like [Metaseiulus
            occidentalis]
          Length = 1154

 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 272/1265 (21%), Positives = 522/1265 (41%), Gaps = 175/1265 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T  +PT +   + GNF+      ++VA+   LE+L     G ++ +    I+G I
Sbjct: 3    YNYIVTAHKPTAVTGCLTGNFTTPTDRNLIVAKNTRLEILTITEEG-LKPIKEVNIYGRI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGC------RRI 114
              + +FR     KD +   +D   + ILE++  S   F+ I +      GC      R  
Sbjct: 62   SVMKKFRYPNESKDLLFFLTDKYNVAILEFSAESSENFEVITR----SHGCVSDPYARPS 117

Query: 115  VPGQYLAVD-PKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGID 173
              G  + VD PK R + +   +    +  LNR+     + +  +E  +    +  +C + 
Sbjct: 118  EAGNLVVVDQPKARVIALRLYDGLLKMIPLNREAKELRSYNIRVEEAQ----ITDMCFLS 173

Query: 174  CGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR-KWSE-PVDNGA 231
                +P+ A +   Y E           +  +++  + + L    + +  W +  +D  A
Sbjct: 174  SSSSDPVLAIV---YEE-----------QQTRHMKTHVIALRDKELMKGPWGQRNLDLEA 219

Query: 232  NMLVTVPGGGDGPSGVLVCA-ENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHR 290
            +ML+ V    D  +GV++   E  V +  Q +  ++    R            +S     
Sbjct: 220  DMLIPVE---DTETGVIIVGGETIVYHYGQDYICIQPSFLRTTK---------ISCYCRI 267

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
                  F+L    G +F +TL  +N+ V    +    ++ +   +  L +G +F  S  G
Sbjct: 268  DNNRLVFILGGICGRLFILTLRRENKKVVSHSLDLLGSVSIPECLSYLDNGVVFVGSRLG 327

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI 410
            +  L +  A   +P +E                            +E   +L  I+DM +
Sbjct: 328  DSQLIRMHA--QEPFIEV---------------------------LESYTNLGAILDMIV 358

Query: 411  ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV-----N 465
             +L ++   Q+ T  G+G   SLRI+R G+ + E+A  +L G+   +W ++ N      +
Sbjct: 359  VDLEKQGQDQLITCSGQGACGSLRIIRNGIGIHELACVELSGI-KGIWALRMNTAQLEED 417

Query: 466  DEFDAYIVVSFNNATLVLSIGET--VEEVS-DSGF-LDTTPSLAVSLIGDDSLMQVHPSG 521
               D  +V+SF   T V +   T  +E+V+  + F +D+    A +++G+  ++QV    
Sbjct: 418  TPTDDTLVLSFVGQTRVFNCSSTEELEQVTLPAAFDIDSQTFCARNVLGN-QVIQVTDKR 476

Query: 522  IRHIR--EDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHE 579
            +  I      R+++W  P    I +   N +QV +AL    L+Y E+   G L E+++  
Sbjct: 477  VNLISVTSKTRVDQWFPPEGEIITQCACNDVQVALALKN-VLVYLEI-RDGSLTEIKRTR 534

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PES 636
            +  ++AC+D+ ++ +   ++  + VG + D +I +LSL PD  ++ L  Q +     P S
Sbjct: 535  LEYEIACMDLNTLDKEGDQTSIITVGLWTDVSILVLSL-PD--LEQLFRQELPKDVIPRS 591

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            +L +  + S             +L   L +G LF   +   TG+L+  +   LG +P  L
Sbjct: 592  VLKITFEGSTD-----------YLLCTLADGSLFYYHL-ASTGELTGQKRVTLGTQPTTL 639

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                     ++   S RP + Y    + + + ++   +++  SFSS+   + +   + + 
Sbjct: 640  RKFRSQRTWSVFACSDRPTVIYSSTSKLVFSKVNLREVKHMCSFSSEAFPDSLALASEDE 699

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVII--------ETDQGALTAEERE 808
              + TI+ + +    T +PL  +PRR   Q +     +I         T   +L A  + 
Sbjct: 700  FVIGTIDAIQKLHIRT-VPLGESPRRIAYQEETGTFGVIVSRSDMACSTRCASLDAPNKS 758

Query: 809  AAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR 868
             A    +             D++++G         S      P +  D+  S + ++D  
Sbjct: 759  NASPYAWHKDFSSFGHTQCADRVDSG-----IPSCSSTSLQRPPSGCDETFSLL-IIDQN 812

Query: 869  SANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYR 926
            +      ++   NE   SIC+       +   + VGTA     +  PK     G I + R
Sbjct: 813  TFEVLHAMQFCPNEYGVSICSAKLGSDPNPYYI-VGTAFINQEESEPK----VGRIFVLR 867

Query: 927  FVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNT 986
            +  +GK LE + + +  G P ++ +F  +L   I   +RLY    ++ L+      F   
Sbjct: 868  W-HDGK-LETIAEKEAAGAPYSIREFHQKLAIAINSTVRLYSWNAEKDLQSECTPFFNIV 925

Query: 987  IVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADK 1046
            I+ +    D I VGD+  S     Y  D   L     D    W TA   +D DT   A+ 
Sbjct: 926  ILHLKCLGDYILVGDLMRSMTLLNYNADITSLEEIGRDYQTNWTTAVEILDEDTFLAAES 985

Query: 1047 FGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL 1106
              N+Y  +           DP+           +     M E+  +H+G++V  + K SL
Sbjct: 986  NLNLYVCK----------RDPSAA---------DDTRQHMHEVALYHLGEMVNVIVKGSL 1026

Query: 1107 V---PGG-----GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHM 1158
            V   PG       +S +YG++ G++G ++    ++     + ++ ++ +    +   +H 
Sbjct: 1027 VMAQPGDMPLPLNKSFLYGSLHGAVGVIVPI-KQELYAILNQIQTNLAKTIKSVGKIEHG 1085

Query: 1159 AYRS-----AYFPVKDVIDGDLCEQFPTL----------SLDLQRKIADELDRTPGEILK 1203
             +R+        P    IDGDL EQ   L          S+ +  +   + + TP +++K
Sbjct: 1086 FWRTFLAERKIEPATGFIDGDLIEQLLDLPKEALESVSQSIKVDEEGGHQRNMTPEDLVK 1145

Query: 1204 KLEEI 1208
             +E++
Sbjct: 1146 LVEDL 1150


>gi|355752055|gb|EHH56175.1| Damage-specific DNA-binding protein 1, partial [Macaca fascicularis]
          Length = 1125

 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 272/1233 (22%), Positives = 503/1233 (40%), Gaps = 171/1233 (13%)

Query: 16   AAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKD 75
            + ++G+F+  +   +++A+   LE+      G +  +    ++G I  +  FR  G  KD
Sbjct: 2    SVLSGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKIAVMELFRPKGESKD 60

Query: 76   YIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIVPGQYLAVDPKGRAV 129
             + + +      ILEY  S    D I       Q+  G+     I+      +DP+ R +
Sbjct: 61   LLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG----IIDPECRMI 116

Query: 130  MIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYS 189
             +   +    V  L+RD       +  LE  + H I         G   P    +     
Sbjct: 117  GLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YGCQAPTICFVY---- 167

Query: 190  EADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVPGGGDGPSGVL 248
               QD  G+     + +L   E + G       W  E V+  A+M++ VP   +   G +
Sbjct: 168  ---QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIAVP---EPFGGAI 215

Query: 249  VCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
            +  +  + Y N         P ++    V   R D    R +L        +  LF  LL
Sbjct: 216  IIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL-----GDMEGRLFMLLL 270

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            + E      VTL+       +L+++      +   +  L +G +F  S  G+  L +   
Sbjct: 271  EKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVK--- 320

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            +  D + + S    MET                        +L PI+DM + +L  +   
Sbjct: 321  LNVDSNEQGSYVVAMET----------------------FTNLGPIVDMCVVDLERQGQG 358

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N E D  +V+SF   
Sbjct: 359  QLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDTLVLSFVGQ 417

Query: 480  TLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRT 536
            T VL + GE VEE    GF+D   +     +    L+Q+  + +R + ++ +  ++EW+ 
Sbjct: 418  TRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKE 477

Query: 537  PGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGR 596
            P  + I     N  QVV+A+  G  +Y+      +L ++   EM  +VACLDI  + +  
Sbjct: 478  PQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSN 535

Query: 597  KRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGEDGAD 653
              S   A+G + D + RIL L   + +  ++L  + +   P S+L    ++S        
Sbjct: 536  GLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILMTTFESS-------- 584

Query: 654  HPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
            H    +L   L +G LF   +++ TG LSD +   LG +P  L +        +   S R
Sbjct: 585  H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDR 640

Query: 714  PWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETA 773
            P + Y    + + + ++ + + Y    +SD   + +     + L + TI+ + +  +   
Sbjct: 641  PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI-QKLHIRT 699

Query: 774  LPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAAGMGENGNGNM 828
            +PL  +PR+   Q   +   ++ +     D    T   R +A  +   ++        + 
Sbjct: 700  VPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSS 759

Query: 829  ---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
                +   G++   ++ L  +Q+ +    + +++                     NE A 
Sbjct: 760  TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ--------------------NEYAL 799

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            S+ +     K+  T   VGTA  + +  +     G I ++++  +GK L+ + + +V+G 
Sbjct: 800  SLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDGK-LQTVAEKEVKGA 854

Query: 946  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQES 1005
              ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  D I VGD+  S
Sbjct: 855  VYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRS 914

Query: 1006 FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE 1065
                 Y+  E      A D  P W++A   +D D   GA+   N++  +  +D +   +E
Sbjct: 915  VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--KDSAATTDE 972

Query: 1066 DPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------PGGGESVIY 1116
            +                   ++E+  FH+G+ V      SLV         P  G SV++
Sbjct: 973  E----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQG-SVLF 1015

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF-----PVKDVI 1171
            GTV G +G + +  S    +    ++  + +    +   +H  +RS +      P    I
Sbjct: 1016 GTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFI 1074

Query: 1172 DGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            DGDL E F  +S    +++   L    G  +K+
Sbjct: 1075 DGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1107


>gi|260790329|ref|XP_002590195.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
 gi|229275385|gb|EEN46206.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
          Length = 1152

 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 282/1236 (22%), Positives = 511/1236 (41%), Gaps = 162/1236 (13%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFG 59
            Y Y +T  +PT + A + G+F+G +   +++A+   LE  L+ PE    +  +     +G
Sbjct: 3    YNYVVTAHKPTAVNACVTGHFTGPEDLNLIIAKNTRLEIYLVTPEG---LRPVKEVGCYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN---VFDKIHQETFGKSGCRRIVP 116
             I  +  FR  G  KD + + +      ILEY    +   +  + H     + G R    
Sbjct: 60   RIAVMELFRPPGETKDLLFILTARYNACILEYKQDGDDVSIVTRAHGNVQDRIG-RPSET 118

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            G    +DP+ R + +   +    V  L+RD       +  LE      + +      C  
Sbjct: 119  GIIGIIDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELNVIDVKFLY---GCQV 175

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR-KWSEP-VDNGANML 234
               +F           QD  G       +++  YE+ +     S+  W +  V+  A+M+
Sbjct: 176  PTVVFVY---------QDPHG-------RHVKTYEISVRDKEFSKGPWKQDNVETEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPA-ERGVLIVSAATHRQKT 293
            + VP   +   G L+  +  + Y N G   V AV P     PA ++  LI         +
Sbjct: 220  IAVP---EPFCGSLIIGQESITYHN-GDKYV-AVAP-----PAIKQSTLICHGRVDANGS 269

Query: 294  LFFFLLQTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
             +  LL    G +F + LE +     +  V +LK++      +   +  L +G ++  S 
Sbjct: 270  RY--LLGDMSGRLFMLLLEKEELIDGSVTVKDLKVELLGETSIAECLTYLDNGVVYLGSR 327

Query: 349  FGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
             G+  L +   +  D D   S   +MET                        +L PI+DM
Sbjct: 328  LGDSQLIK---LNVDADDSGSYVHVMET----------------------FTNLGPIVDM 362

Query: 409  RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEF 468
             + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +  + N   
Sbjct: 363  CVVDLERQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGI-KGIWPLCVDPNGTM 421

Query: 469  DAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
            D  +V++F   T VL + GE VEE    GF D       +++G   L+Q+  + +R +  
Sbjct: 422  DDTLVLAFVGQTRVLLLSGEEVEETELPGFEDKQTFFCGNVMG-GQLLQITAASVRLVSR 480

Query: 528  DGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVA 585
              +  ++EW+ P ++ I    SN  QVV A+  G+++Y+     G+L ++ +  M+ +VA
Sbjct: 481  QTKQLVSEWKPPSEKNISVASSNTTQVVCAV--GQVVYYIEIHEGELKQLGETVMAREVA 538

Query: 586  CLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA 644
            CLD+  + EG  R+   AVG + D +  +L L   + M +  +      P S+L    + 
Sbjct: 539  CLDVTPLVEGSDRAHLCAVGLWTDISAHMLQLPNLEPMHV-EMLGGEIIPRSILMTTFE- 596

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQ------LSDSRSRFLGLRPPKLFS 698
                          +L   L +G LF   ++  TG+      L+      LG +P  L +
Sbjct: 597  -----------GIHYLLCALGDGSLFYFNLNPETGKNFSLHILTIKSKVTLGTQPTVLRT 645

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
                    +   S RP + Y    + + + ++ + + Y    +S    + +     + L 
Sbjct: 646  FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSQGYPDSLALTNDSTLT 705

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-------DQGALTAEEREAAK 811
            + TI+ + +  +   +PL  +PRR   Q   +   ++ T         G+ T   R +A 
Sbjct: 706  IGTIDEI-QKLHIRTVPLYESPRRIAYQETSQTFGVLSTRTEVEDASGGSGTQPVRPSAS 764

Query: 812  KECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
                    +  + + N + + + +D       SD  +G      +  +  + V+D  +  
Sbjct: 765  -----TTALSTSVSPNKNALRSSND-------SDGAFG-----EEIEIHSLLVVDQHTFE 807

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                 +L  +E A S+ +    D +  T   +GTA  + +  +    +G I ++++  +G
Sbjct: 808  ILHAHQLLKDEFALSMVSCKLGD-DPNTYFIIGTA--MVYPEESEPKSGRIIVFQYT-DG 863

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   +L QF  +LLA I   +RL++   ++ LR   N       + + 
Sbjct: 864  K-LQQVAEKEVKGAVYSLVQFNNKLLASINSTVRLFEWTAEKELRVECNHYNNILALYLK 922

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N  
Sbjct: 923  TKGDFILVGDLMRSVTLLAYKPMEGCFEEIARDFNPNWMSAVEILDDDNFLGAENSFN-- 980

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---P 1108
            F    +D +   +E+                   ++E+  FH+G+ V   +  SLV   P
Sbjct: 981  FFTCQKDSAATTDEE----------------RQHLQEVGHFHLGEFVNVFRHGSLVMQHP 1024

Query: 1109 GGGE-----SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSA 1163
            G        SV++GTV G++G +    + D  +F   ++  + +    +   +H  +RS 
Sbjct: 1025 GETSTPTQGSVLFGTVNGAVGLVTQLPA-DFFNFLQEVQSKLTRVIKSVGKIEHSFWRSF 1083

Query: 1164 YFPVKD-----VIDGDLCEQFPTLSLDLQRKIADEL 1194
                K       IDGDL E F  LS D  +++   L
Sbjct: 1084 NTERKTEACQGFIDGDLIESFLDLSRDKMQEVVQGL 1119


>gi|351699158|gb|EHB02077.1| DNA damage-binding protein 1 [Heterocephalus glaber]
          Length = 1144

 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 278/1252 (22%), Positives = 510/1252 (40%), Gaps = 177/1252 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I         G
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YG 172

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
               P    +        QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 173  CQAPTICFVY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      V L+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVALK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++   +
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSAPS 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELVGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTP-GKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMS 581
            + ++ +  ++EW+ P GK   V  GS+  QVV+A+  G  +Y+      +L ++ + EM 
Sbjct: 479  VSQEPKALVSEWKEPQGKNNSVASGSSS-QVVVAV--GRALYYLQIHPRELRQISQTEME 535

Query: 582  GDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLL 638
             +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L
Sbjct: 536  HEVACLDITPLGDSSGLSPLCAIGLWTDISARILQLPSFELLHKEMLGGEII---PRSIL 592

Query: 639  FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
                ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L +
Sbjct: 593  MTTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRT 640

Query: 699  VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
                    +   S RP + Y    + + + ++ + + Y    +SD   + +     + L 
Sbjct: 641  FRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLT 700

Query: 759  VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKE 813
            + TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  +
Sbjct: 701  IGTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQ 759

Query: 814  CFEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSA 870
               ++        +     +   G++   ++ L  +Q+ +    + +++           
Sbjct: 760  ALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL----------- 808

Query: 871  NTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEE 930
                      NE A S+ +     K+  T   VGTA  + +  +     G I ++++ +E
Sbjct: 809  ---------QNEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQYSDE 856

Query: 931  GKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI 990
             +  E+  +  V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + +
Sbjct: 857  ER--EVSSRGLVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYL 914

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N+
Sbjct: 915  KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNL 974

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV--- 1107
            +  +  +D +   +E+                   ++E+  FH+G+ V      SLV   
Sbjct: 975  FVCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQN 1016

Query: 1108 ------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY- 1160
                  P  G SV++GTV G +G + +  S    +    ++  + +    +   +H  Y 
Sbjct: 1017 LGETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSLYP 1074

Query: 1161 -RSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             R+  F  +         IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1075 SRAVSFHTERKTEQATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1126


>gi|366995619|ref|XP_003677573.1| hypothetical protein NCAS_0G03340 [Naumovozyma castellii CBS 4309]
 gi|342303442|emb|CCC71221.1| hypothetical protein NCAS_0G03340 [Naumovozyma castellii CBS 4309]
          Length = 1280

 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 190/744 (25%), Positives = 355/744 (47%), Gaps = 111/744 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF---SGT-KTP---EIVVARGKVLELLRPENSGRIETLV 53
           +YLY LTLQ  +  + +  GNF   +GT K P   ++ +A    +E+      G +  L 
Sbjct: 8   LYLYHLTLQTQSNYVHSAPGNFVDIAGTGKKPSSLQLCLATETHIEIYDVS-KGTLRKLF 66

Query: 54  STEIFG-AIRSLAQFRLTGSQKDYIVVGSDSGRIVILE---YNPSKNVFDKIHQETFGKS 109
            + IF   I  L  F   GS+  +I + SD+G + IL+   +  S+     +  E F +S
Sbjct: 67  QSPIFQFKITQLKAFTPKGSRISFIALTSDAGNLTILKCSYHQHSRIKLVPVINEPFARS 126

Query: 110 GCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLN---RDTAARLTISSPLEAHKSHTIV 166
           G R+  P  ++ +D   R + I A +++KL+Y+L+   RD    L+ISSPLE   S++  
Sbjct: 127 GIRKNSPISFMTIDSMARCLTISAVQQKKLLYLLDYSERDDT--LSISSPLEVVNSNSFT 184

Query: 167 YSICGIDCGFD---NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRK- 222
            S+  +DC  +   NPIF +IE++                   L FY LDLGLNH+ +K 
Sbjct: 185 LSM--VDCPSNLNNNPIFTSIEIE--------------NQNYFLIFYLLDLGLNHIIKKA 228

Query: 223 WSEPVDNGANMLVTVPG---GGDGPSG--VLVCAENFVIYKNQGHPDVRAVIPRRADLPA 277
           + +  D     L  +P        P    VL+    +++ K     D+   I  + D+P+
Sbjct: 229 FFKISDPSVCFLFALPNILQHDQDPINPCVLLGFNKYLLVK-----DMNGSINIKIDMPS 283

Query: 278 ---ERGVLIVSAATHR-QKTLFFFLLQTEYGDIFKVT--LEHDNEHVSELKIKYFDTIPV 331
                 V I+SA   + +K  +F LLQ+  G ++K+T   + D+ +     + +FD I  
Sbjct: 284 IDTNEDVFIISATMQKLKKNEYFILLQSNRGHLYKLTHKFDADDNNSLHFSMTFFDAILP 343

Query: 332 TASMCVLKSGYLFAASEFGNHA--LYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRG 389
           ++SM + K+G++F  SE+ ++   L+QFQ++G               EEG +   ++P  
Sbjct: 344 SSSMHIFKNGFMFTNSEYNDNKNYLFQFQSLG---------------EEG-EKQEYKPDI 387

Query: 390 LKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ 449
           L+NL      +   P++   + N     +  +  +      +++ +L      + +  + 
Sbjct: 388 LQNLSIASTQQKNNPLLSSSVNN-----STPLQLITSNSKENTITVLSNATRFNNLISTN 442

Query: 450 LPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVS---DSGFLDTTP-SL 504
           LP     +WT+K        + + +SF N+T++L I  +++E+++    S F++    ++
Sbjct: 443 LPPNVRNIWTIKAK-----HSLMFLSFINSTMILQITNDSMEQLTLPYKSPFIEKDEMTI 497

Query: 505 AVSLIGDDSLMQVHPSGIRHIREDG------RINEWRTPGKRTIVKVGSNRLQVVIALSG 558
            V+ +G +S++Q+  + +R I  D       ++N W  P    I     N  Q++++LS 
Sbjct: 498 YVNKMGSNSIVQICTNTLRQIHIDTNQTFTEKLN-WFPPAGIHITNAQCNDTQLILSLSN 556

Query: 559 GELIYFEVDMTGQLLEVEKH-EMSGD--VACLDIASVPEGRKRSRFLAVGSYDNTIRILS 615
            E++YF++D +  L+E ++  E + D  +  + +         S  +A+G+  + I+I+S
Sbjct: 557 NEIVYFQMDQSDSLMEYQRRLEFNDDEPITSISLIESSSSTTFSNIMAIGTKGSLIKIVS 616

Query: 616 L---DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRT 672
           L   DPD  ++++S+Q+  S    L  +    ++             L+ GL NGV   +
Sbjct: 617 LNSNDPDTFLEVVSLQTTLSAVNQLKLVSNNKTIK------------LHVGLDNGVYMNS 664

Query: 673 VVDMVTGQLSDSRSRFLGLRPPKL 696
            V++  G + D R+++LG  P  L
Sbjct: 665 NVNVKDGTIFDVRTKYLGPNPITL 688



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 147/353 (41%), Gaps = 72/353 (20%)

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGP-VLRLYDLGKKRLLRKCENKLFPNT--IVS 989
            +LELLH T VEG    +  F+  LL       L LYDLGKK+LL++  +K  P+   IV 
Sbjct: 928  TLELLHTTDVEGNVNCMIPFKDLLLVPYDDNFLVLYDLGKKQLLKRSISKTLPSMTRIVQ 987

Query: 990  INTYRD-RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
            +  ++D RI VGDI +S     + +  N     ADD   R +T+   +D  T+ G D+FG
Sbjct: 988  MANWQDERIAVGDIHQSVTLLHFDQRTNSFIPLADDITQRHVTSLAFLDKSTVIGGDRFG 1047

Query: 1049 NIYFVRLPQDVSD-------EIEEDPTGGK------IKWEQGKLNGAPN------KMEEI 1089
            N++ +RL  +  D       E+  D           ++ +    N  PN      K+  +
Sbjct: 1048 NVWTLRLADENEDVLNKLIAELAADQDSNVTLLKSLLRHDSNLRNKLPNIFECPFKLTLM 1107

Query: 1090 VQFHVGDVVTSLQ-KASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE------ 1142
              F + D+V +     SL      +++Y  + GS+G ++   ++  +     +E      
Sbjct: 1108 NHFFINDIVMNFHIIESLQMSDRPTILYTGLQGSIGCLVPLLAKSQITMLKKIEKAVSEA 1167

Query: 1143 ----------------------------------MHMRQE------HPPLCGRDHMAYRS 1162
                                               H ++E      +  + GRDH  YR 
Sbjct: 1168 DDILILNRYMKKTDGNDSDLSDADTADAIDFTNTHHGKKEDTRPEGYYSIVGRDHSKYRG 1227

Query: 1163 AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRT--PGEILKKLEEIRNKIV 1213
             Y PV++ +DGDLCE F   +   Q  +   + +     +I + + EIR   +
Sbjct: 1228 YYAPVRNTVDGDLCESFLNFTSSEQTLLCRSIGKKVHTEDIQRYINEIRTNYI 1280


>gi|432089478|gb|ELK23419.1| DNA damage-binding protein 1 [Myotis davidii]
          Length = 1047

 Score =  206 bits (523), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 253/1121 (22%), Positives = 465/1121 (41%), Gaps = 139/1121 (12%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ +  
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPT 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE   +GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELTGFVDEQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + +D +  ++EW+ P  + I     N  QVV+A+  G  +Y       +L ++   EM  
Sbjct: 479  VSQDPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYCLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLM------VIIETDQGALTAEEREAAKKE 813
             TI+ + +  +   +PL  +PR+   Q   +        + ++   G  TA    A+ + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQA 760

Query: 814  CFEAAGMGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
               +    +  + +    E   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWE--QGKLNGAPNKMEEIV 1090
              +  +    E + +P  G I  +  +  L+ +  KM+E+V
Sbjct: 976  VCQKDRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVV 1016


>gi|357519461|ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
 gi|355524041|gb|AET04495.1| DNA damage-binding protein [Medicago truncatula]
          Length = 1171

 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 275/1323 (20%), Positives = 527/1323 (39%), Gaps = 273/1323 (20%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            ++ Y +T  +PT +  +  GNF+  +   +++A+   +E+      G +++++   ++G 
Sbjct: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQDLNLILAKCTRIEIHLLTAQG-LQSILDVPLYGR 61

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP---G 117
            I +L  FR  G  +D++ + ++  +  +L+++  K+   ++   + G    R   P   G
Sbjct: 62   IATLELFRPHGETQDFLFIATERYKFCVLQWDTEKS---ELVTRSMGDVSDRIGRPTDNG 118

Query: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFD 177
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCP 173

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE-PVDNGANMLVT 236
             P    +  D  +A    T + A + +            + V   WS+  +DNGA++L+ 
Sbjct: 174  KPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNSLDNGADLLIP 221

Query: 237  VPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFF 296
            VP       GVL+  E  ++Y +    +    IP RA +    G +    +         
Sbjct: 222  VP---PPLCGVLIIGEETIVYCS---ANGFKAIPIRAAITKAYGRVDPDGSR-------- 267

Query: 297  FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            +LL    G +  + + H+ E V+ LKI+      + +++  L + +++  S +G+  L +
Sbjct: 268  YLLGDHTGLLSLLVITHEKEKVTGLKIEPLGETSIASTISYLDNAFVYIGSSYGDSQLIK 327

Query: 357  FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEE 416
                                    QP    P+G   +  +E+  +L PI+D  + +L  +
Sbjct: 328  LN---------------------LQP---DPKG-SYVEVLERYVNLGPIVDFCVVDLERQ 362

Query: 417  EAPQIFTLCGRGPRSSLRILRPGLAVSEMA------------------------------ 446
               Q+ T  G     SLR++R G+ ++E                                
Sbjct: 363  GQGQVVTCSGAYKDGSLRVVRNGIGINEQVSPLFSCLSVGSFTQDTTKRKRFFFFLIINN 422

Query: 447  VSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT--LVLSIGETVEEVSDSGFLDTTPSL 504
              +L G+   +W+++ + +D FD ++VVSF + T  L +++ + +EE    GF     +L
Sbjct: 423  TLELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTL 481

Query: 505  AVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQ----------- 551
                   + L+QV  + +R +    R  +NEW  P   ++    +N  Q           
Sbjct: 482  FCHDAVHNQLVQVTSNSVRLVSSSTRELLNEWHAPSDYSVNVATANATQSQNHFIFQISS 541

Query: 552  -----------------------------------------VVIALSGGELIYFEVDMTG 570
                                                     V++A  GG L+Y E+   G
Sbjct: 542  PSLSHGNIMICLSCKDVDNWSSTSSSLSLIYRVLFLLVAASVLLATGGGHLVYLEIG-DG 600

Query: 571  QLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQS 629
             L EV+  ++  +++CLDI  + E   +S+  AVG + D ++R+ SL P+  + +++ + 
Sbjct: 601  ILQEVKHAQLEYEISCLDINPIGENPNQSQLAAVGMWTDISVRLFSL-PE--LNLITKEH 657

Query: 630  VSSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSR 687
            +     P S+L    +               +L   L +G L   +++  TG+L+D +  
Sbjct: 658  LGGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFMLNTSTGELTDRKKV 705

Query: 688  FLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVE 747
             LG +P  L +        +   S RP + Y    + L + ++ + + +   F+S    +
Sbjct: 706  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 765

Query: 748  GVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEER 807
             +       L + TI+ + +  +   +PL    RR   Q + +   I      + +AEE 
Sbjct: 766  SLAIAKEGELTIGTIDDI-QKLHIRTIPLGEHARRICHQEQTRTFAICSLKYNSASAEES 824

Query: 808  EAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDP 867
            E                                                  +  +R+LD 
Sbjct: 825  E--------------------------------------------------MHFVRLLDD 834

Query: 868  RSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYR 926
            ++ +   +  L   E    I + +F D ++     VGTA  L   P+ N    G I ++ 
Sbjct: 835  QTFDFISVYPLDTYEYGCFIISCSFSD-DNNVYYCVGTAYVL---PEENEPTKGRILVFS 890

Query: 927  FVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL-----GKKRLLRKCENK 981
             VEEGK L+L+ + + +G    L  F G+LLA I   ++LY       G + L  +C + 
Sbjct: 891  -VEEGK-LQLVAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLREDGTRELQSECGHH 948

Query: 982  LFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTM 1041
                 +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   +D D  
Sbjct: 949  GHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVY 1007

Query: 1042 AGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSL 1101
             GA+   N++ VR                  K  +G  +    ++E   ++H+G+ +   
Sbjct: 1008 LGAENSFNLFTVR------------------KNSEGATDEERGRLEVAGEYHLGEFINRF 1049

Query: 1102 QKASLV-------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCG 1154
            +  SLV        G   +VI+GT+ G +G + +      V F   L+ ++R+    + G
Sbjct: 1050 RHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYV-FLEKLQSNLRKVIKGVGG 1108

Query: 1155 RDHMAYRS-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR----TPGEILKKL 1205
              H  +RS          ++ +DGDL E F    LDL+R   DE+ +    +  E+ K++
Sbjct: 1109 LSHEQWRSFNNEKKTVEARNFLDGDLIESF----LDLKRSKMDEISKAMEVSVEELAKRV 1164

Query: 1206 EEI 1208
            EE+
Sbjct: 1165 EEL 1167


>gi|402586182|gb|EJW80120.1| hypothetical protein WUBG_08972 [Wuchereria bancrofti]
          Length = 162

 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 89/159 (55%), Positives = 121/159 (76%)

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
            +RLP+ V++E++EDPTG +  W++G LNGA  K+E I   ++GD +TS+QKASLVPG  +
Sbjct: 1    MRLPKGVTEEVQEDPTGVRALWDRGNLNGASQKLEAIAHLYIGDAITSMQKASLVPGAND 60

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
             + Y T+ G +G ++ F SRD+ +FF +LEMHMR E+PPLCGRDH+AYRS YFPVK VID
Sbjct: 61   CLSYTTISGIIGILVPFMSRDEFEFFQNLEMHMRVEYPPLCGRDHLAYRSYYFPVKSVID 120

Query: 1173 GDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            GDLCEQ+  + LD Q+ + +EL R P EI KKLE+IR +
Sbjct: 121  GDLCEQYSLMPLDKQKSVGEELGRKPTEIHKKLEDIRTR 159


>gi|16197726|emb|CAC94909.1| damaged-DNA recognition protein 1 [Mus musculus]
          Length = 994

 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 243/1083 (22%), Positives = 448/1083 (41%), Gaps = 137/1083 (12%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDINLLIAKNTRLEIYVVTTEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPN 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPRAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKMTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++++ + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNFKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
             TI+ + +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 760

Query: 815  FEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
              ++        +     +   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLF 975

Query: 1052 FVR 1054
              +
Sbjct: 976  VCQ 978


>gi|238609081|ref|XP_002397396.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
 gi|215471757|gb|EEB98326.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
          Length = 180

 Score =  203 bits (516), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 94/168 (55%), Positives = 124/168 (73%), Gaps = 1/168 (0%)

Query: 385 FQPRGLKNLVRIEQVESLMPIMDMRIANLF-EEEAPQIFTLCGRGPRSSLRILRPGLAVS 443
           F+PR L+NL   +++ESL PI+D ++ N+    + PQIF +CGRG RSSLR LR GL V 
Sbjct: 13  FRPRPLENLAIADEIESLCPILDSKVLNILPNSDTPQIFAVCGRGARSSLRTLRHGLEVE 72

Query: 444 EMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPS 503
           E   S+LPG+P+AVWT KK  +D FD+YI++SF N TLVLSIGET+EEV D+GFL + P+
Sbjct: 73  ESVSSELPGIPNAVWTTKKREDDPFDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPT 132

Query: 504 LAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQ 551
           LAV  IG D+L+QVHP GIRH+  D R+NEWR P  ++IV   +N+ Q
Sbjct: 133 LAVQQIGADALLQVHPGGIRHVLADSRVNEWRVPTGKSIVAATTNKRQ 180


>gi|281345356|gb|EFB20940.1| hypothetical protein PANDA_015888 [Ailuropoda melanoleuca]
          Length = 1124

 Score =  202 bits (514), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 274/1237 (22%), Positives = 505/1237 (40%), Gaps = 181/1237 (14%)

Query: 18   INGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYI 77
            ++G+F+  +   +++A+   LE+      G +  +    ++G I  +  FR  G  KD +
Sbjct: 1    LSGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKIAVMELFRPKGESKDLL 59

Query: 78   VVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIVPGQYLAVDPKGRAVMI 131
             + +      ILEY  S    D I       Q+  G+     I+      +DP+ R + +
Sbjct: 60   FILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG----IIDPECRMIGL 115

Query: 132  GACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEA 191
               +    V  L+RD       +  LE  + H I         G   P    +       
Sbjct: 116  RLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YGCQAPTICFVY------ 164

Query: 192  DQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVPGGGDGPSGVLVC 250
             QD  G+     + +L   E + G       W  E V+  A+M++ VP   +   G ++ 
Sbjct: 165  -QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIAVP---EPFGGAIII 214

Query: 251  AENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAATHRQKTLFFFLLQT 301
             +  + Y N         P ++    V   R D    R +L        +  LF  LL+ 
Sbjct: 215  GQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL-----GDMEGRLFMLLLEK 269

Query: 302  EYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIG 361
            E      VTL+       +L+++      +   +  L +G +F  S  G+  L +   + 
Sbjct: 270  EEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVK---LN 319

Query: 362  ADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQI 421
             D + + S    MET                        +L PI+DM + +L  +   Q+
Sbjct: 320  VDSNEQGSYVVAMET----------------------FTNLGPIVDMCVVDLERQGQGQL 357

Query: 422  FTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATL 481
             T  G     SLRI+R G+ + E A   LPG+   +W ++ + N E D  +V+SF   T 
Sbjct: 358  VTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDTLVLSFVGQTR 416

Query: 482  VLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPG 538
            VL + GE VEE    GF+D   +     +    L+Q+  + +R + ++ +  ++EW+ P 
Sbjct: 417  VLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQ 476

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
             + I     N  QVV+A+  G  +Y+      +L ++   EM  +VACLDI  + +    
Sbjct: 477  GKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGL 534

Query: 599  SRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGEDGADHP 655
            S   A+G + D + RIL L   + +  ++L  + +   P S+L    ++S        H 
Sbjct: 535  SPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILMTTFESS--------H- 582

Query: 656  ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPW 715
               +L   L +G LF   +++ TG LSD +   LG +P  L +        +   S RP 
Sbjct: 583  ---YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPT 639

Query: 716  LGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
            + Y    + + + ++ + + Y    +SD   + +     + L + TI+ + +  +   +P
Sbjct: 640  VIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI-QKLHIRTVP 698

Query: 776  LRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAAGMGENGNGNM-- 828
            L  +PR+   Q   +   ++ +     D    T   R +A  +   ++        +   
Sbjct: 699  LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTA 758

Query: 829  -DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
              +   G++   ++ L  +Q+ +    + +++                     NE A S+
Sbjct: 759  PHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ--------------------NEYALSL 798

Query: 888  CTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
             +     K+  T   VGTA  + +  +     G I ++++  +GK L+ + + +V+G   
Sbjct: 799  VSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDGK-LQTVAEKEVKGAVY 853

Query: 948  ALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFH 1007
            ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  D I VGD+  S  
Sbjct: 854  SMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVL 913

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDP 1067
               Y+  E      A D  P W++A   +D D   GA+   N++  +  +D +   +E+ 
Sbjct: 914  LLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--KDSAATTDEE- 970

Query: 1068 TGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------PGGGESVIYGT 1118
                              ++E+  FH+G+ V      SLV         P  G SV++GT
Sbjct: 971  ---------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQG-SVLFGT 1014

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGR-----DHMA-YRSAYF-----PV 1167
            V G +G + + S     + + +L + M+     +         H++ +RS +      P 
Sbjct: 1015 VNGMIGLVTSLS-----ESWYNLLLDMQNRLNKVIKNITHSLTHLSTWRSFHTERKTEPA 1069

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
               IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1070 TGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 1106


>gi|325186344|emb|CCA20849.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 1148

 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 280/1285 (21%), Positives = 534/1285 (41%), Gaps = 218/1285 (16%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            +Y Y  T Q+ T +  A   +F+      +++A+    E+      G ++     +++G 
Sbjct: 2    VYSYVATAQKSTSVTHAFTAHFTSPTDLNLLIAKCTHFEVHLLTAEG-LQPQHDIKMYGR 60

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPS-KNVFDKIH---QETFGKSGCRRIVP 116
            I    +FR +G  +D+I + +   +  +L Y+ + + +  K +   ++T G++    +  
Sbjct: 61   IAIFEKFRPSGETQDWIFLVTQRFQFCVLAYDTTLQQIITKANGSLRDTIGRNS-EILTN 119

Query: 117  GQYLAVDPKGRAVMIGACEKQ-KLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
            G    +DP GR + +   E   K++ + N   + +   +  L+  +   I +       G
Sbjct: 120  GN---IDPDGRLIGMNIYEGYFKVIPIDNHSKSLKAAFNIRLDELRILDIKFLY-----G 171

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANML 234
            ++ P    +  D+         +AA   +   T++ L    +     WS+  V+ GAN+L
Sbjct: 172  YNKPTICVLYEDF---------KAARHVK---TYFILLKEKDFAEGPWSQSNVEAGANLL 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            + VP       GVL+ +   ++Y N  +            +P +  ++ V  A     + 
Sbjct: 220  IPVPMP---YGGVLIISNQTIVYHNGTYFHA---------IPMQNTMIQVYGAVGDDGSR 267

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
            F  LL  +YG +  V L+ + + V ++ ++      + + +  L +G +F  S FG+  L
Sbjct: 268  F--LLADQYGALHVVALQTEGKEVLDVYLEVLGQTSIASCVSYLDNGVVFVGSTFGDSQL 325

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
             +  +          S + +E  + +                    ++ PI+D  + +L 
Sbjct: 326  VKLNS------KRDESGSYIEVLDSYV-------------------NIGPIIDFCVMDLD 360

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474
             +   QI T  G     SLR++R G+ ++E A ++LPG+   +W +++++  E+D Y+V 
Sbjct: 361  RQGQGQIVTCSGADKDGSLRVIRNGIGINEQASAELPGI-KGMWALRESLASEYDKYLVQ 419

Query: 475  SFNNATLVLSIGET--VEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN 532
            S+ N   +++IG++  +EEV    FLD   +L    + +D  +QV  + +R I  D +  
Sbjct: 420  SYLNEIRIMTIGDSDEMEEVEIEAFLD-AKTLYCRNVNEDGWLQVTETEVRII--DAQTT 476

Query: 533  E----WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
                 W  P    I    +N  Q+V+A S   LIY E+ +  QL+E  + EM  ++AC+D
Sbjct: 477  SICCGWIPPPSTRITVASANPTQIVLATSSKVLIYMEI-LDKQLMEKARKEMEFEIACID 535

Query: 589  IASV-----PEGRKRSRFLAVGSYDNTIRILSLDPDDC-MQILSVQSVSSPPESLLFL-- 640
            ++       P    RS  +   + ++   I+S D +     I +V   +S    +L L  
Sbjct: 536  LSPRLDQIDPPALTRSSQVMDEAMEDA--IVSRDANALRTSICAVGFWTSSSVCVLSLPS 593

Query: 641  --EVQASVGGED-------GADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGL 691
              E+      +D        A    S +L  GL +G L    +D   G LS+ +   LG 
Sbjct: 594  LDELSKETFDKDLLPRSVLCASFEDSDYLLIGLGDGSLVTCHLDREFGTLSERKRISLGT 653

Query: 692  RPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVS 751
            +P  L +     +  +     RP + Y ++ + L + ++ + +   ++F S+   E +  
Sbjct: 654  QPISLSAFWSKDKLHVFASCDRPTVIYYNKKKLLYSNVNAKEVAVMSTFHSEVFPECLAL 713

Query: 752  VAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAK 811
             +G+ L + T++ + +  +  +  L    RR     + + +       G  T +      
Sbjct: 714  ASGSELTIGTVDDI-QKLHIQSFHLNEWARRIAHDSRSRTL-------GVATVK------ 759

Query: 812  KECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRV--LDPRS 869
                            + + + GD+  +         GY +   D+   C++   LDP  
Sbjct: 760  ----------------LSKDDGGDEVEQ---------GYIRLFDDQTFECLKSFRLDPF- 793

Query: 870  ANTTCLLELQDNEAAFSICTVNFH-DKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV 928
                        E+  SI T  F  D   GT   VGTA    F  +         I  F 
Sbjct: 794  ------------ESPCSIITCIFTGDSSGGTYYVVGTA----FVHEEEAEPHQGRILVFT 837

Query: 929  EEG----KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGK-----KRLLRKCE 979
              G    + L+L+ + +V+G    L  F G+LLAG+   + L+   +     + L+ +C 
Sbjct: 838  VSGIHGDRRLQLVTEKEVKGSVYCLNAFNGKLLAGVNSKVYLFKWSESEENGEELVSECG 897

Query: 980  NKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD 1039
            +      ++ + +  D I VGD+ +S     +++ +  +   A D    W+TA   ID D
Sbjct: 898  HH-GHTLVLYMESRGDFIVVGDLMKSISLLNHKQLDGSIEEIARDLNSNWMTAVGIIDDD 956

Query: 1040 TMAGADKFGNIYFV-RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
               G++   N++ V R     SDE            E+G+L       E I ++H+G+ V
Sbjct: 957  NYVGSETDFNLFTVQRNSGAASDE------------ERGRL-------ETIGEYHLGEFV 997

Query: 1099 TSLQKASLV-----------PGGG---------------ESVIYGTVMGSLGAMLAFSSR 1132
               +  SLV           PG                  S+++GTV G +G +L   S+
Sbjct: 998  NRFRYGSLVMQHNLSIGAEAPGISLSDDRPESLSPLSVQRSMLFGTVSGMIGVILPI-SK 1056

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLSLDLQ 1187
            +  +F   ++  + Q    + G  H  +R+     +     + IDGDL E F  LS D  
Sbjct: 1057 EKHEFLMRVQSALNQVIQGVGGFSHSEWRTFENRRSSIEAHNFIDGDLIESFLDLSKDEM 1116

Query: 1188 RKIADELDRTPGEILKKLEEIRNKI 1212
            +++ DEL+R   E    LE +  +I
Sbjct: 1117 KQVVDELNRDQLEGKTTLEALAARI 1141


>gi|345328202|ref|XP_003431248.1| PREDICTED: DNA damage-binding protein 1-like [Ornithorhynchus
            anatinus]
          Length = 1045

 Score =  198 bits (503), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 239/1044 (22%), Positives = 437/1044 (41%), Gaps = 136/1044 (13%)

Query: 193  QDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVPGGGDGPSGVLVCA 251
            QD  G+     + +L   E + G       W  E V+  A+M++ VP   +   G ++  
Sbjct: 88   QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIAVP---EPFGGAIIIG 138

Query: 252  ENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTE 302
            +  + Y N         P ++    V   R D    R +L        +  LF  LL+ E
Sbjct: 139  QESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL-----GDMEGRLFMLLLEKE 193

Query: 303  YGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGA 362
                  VTL+       +L+++      +   +  L +G +F  S  G+  L +   +  
Sbjct: 194  EQMDGAVTLK-------DLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVK---LNV 243

Query: 363  DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIF 422
            D + + S    MET                        +L PI+DM + +L  +   Q+ 
Sbjct: 244  DSNEQGSYVVAMET----------------------FTNLGPIVDMCVVDLERQGQGQLV 281

Query: 423  TLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLV 482
            T  G     SLRI+R G+ + E A   LPG+   +W ++ N N E D  +V+SF   T V
Sbjct: 282  TCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSNSNRETDDTLVLSFVGQTRV 340

Query: 483  LSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGK 539
            L + GE VEE   +GF+D   +     +    L+Q+  + +R + ++ +  ++EW+ P  
Sbjct: 341  LMLNGEEVEETELTGFVDNQQTFFCGNVAHQQLIQITSASVRLVTQEPKALVSEWKEPQG 400

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            + I     N  QVV+A+  G  +Y+      +L ++   EM  +VACLDI  + +    S
Sbjct: 401  KNISVASCNSSQVVVAV--GRALYYLQIHPRELRQISHTEMEHEVACLDITPLGDSHGMS 458

Query: 600  RFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGEDGADHPA 656
               A+G + D + RIL L   + +  ++L  + +   P S+L    ++S        H  
Sbjct: 459  PLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILMTTFESS--------H-- 505

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
              +L   L +G LF   + + TG LSD +   LG +P  L +        +   S RP +
Sbjct: 506  --YLLCALGDGALFYFGLSIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTV 563

Query: 717  GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
             Y    + + + ++ + + Y    +SD   + +     + L + TI+ + +  +   +PL
Sbjct: 564  IYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI-QKLHIRTVPL 622

Query: 777  RYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAG--MGENGNGNMDQMENG 834
              +PR+   Q   +   ++             +++ E  +A+G       +G+   + + 
Sbjct: 623  YESPRKICYQEGSQCFGVL-------------SSRIEVQDASGGTTALRPSGSTQALSSS 669

Query: 835  DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD 894
               +K    S   +     E  + V  + ++D  +       +   NE A S+ +     
Sbjct: 670  VSSSKLFSSSTAPHETSFGEEVE-VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKL-G 727

Query: 895  KEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQG 954
            K+  T   VGTA  + +  +     G I ++++  +GK L+ + + +V+G   ++ +F G
Sbjct: 728  KDANTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDGK-LQTVAEKEVKGAVYSMVEFNG 783

Query: 955  RLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRD 1014
            +LLA I   +RLY+   ++ LR   N       + + T  D I VGD+  S     Y+  
Sbjct: 784  KLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPM 843

Query: 1015 ENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKW 1074
            E      A D  P W++A   +D D   GA+   N++  +  +D +   +E+        
Sbjct: 844  EGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--KDSAATTDEE-------- 893

Query: 1075 EQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------PGGGESVIYGTVMGSLGA 1125
                       ++E+  FH+G+ V      SLV         P  G SV++GTV G +G 
Sbjct: 894  --------RQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQG-SVLFGTVNGMIGL 944

Query: 1126 MLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF-----PVKDVIDGDLCEQFP 1180
            + +  S    +    ++  + +    +   +H  +RS +      P    IDGDL E F 
Sbjct: 945  VTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFL 1003

Query: 1181 TLSLDLQRKIADELDRTPGEILKK 1204
             +S    +++   L    G  +K+
Sbjct: 1004 DISRPKMQEVVANLQIDDGSGMKR 1027


>gi|449283451|gb|EMC90093.1| DNA damage-binding protein 1 [Columba livia]
          Length = 1140

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 276/1239 (22%), Positives = 503/1239 (40%), Gaps = 180/1239 (14%)

Query: 20   GNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVV 79
            G+F+  +   +++A+   LE+      G +  +    ++G I  +  FR  G  KD + +
Sbjct: 10   GHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKIAVMELFRPKGESKDLLFI 68

Query: 80   GSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIVPGQYLAVDPKGRAVMIGA 133
             +      ILEY  + +  D I       Q+  G+     I+      +DP+ R + +  
Sbjct: 69   LTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIG----IIDPECRMIGLRL 124

Query: 134  CEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQ 193
             +    V  L+R+       +  LE  +          ID  F   ++           Q
Sbjct: 125  YDGLFKVIPLDRENKELKAFNIRLEELQV---------IDVKF---LYGCQAPTICFVYQ 172

Query: 194  DSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVPGGGDGPSGVLVCAE 252
            D  G+     + +L   E + G       W  E V+  A+M++ VP   +   G ++  +
Sbjct: 173  DPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIAVP---EPFGGAIIIGQ 223

Query: 253  NFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEY 303
              + Y N         P ++    V   R D    R +L        +  LF  LL+ E 
Sbjct: 224  ESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL-----GDMEGRLFMLLLEKEE 278

Query: 304  GDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGAD 363
                 VTL+       +L+++      +   +  L +G +F  S  G+  L +   +  D
Sbjct: 279  QMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVK---LNVD 328

Query: 364  PDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFT 423
             + + S    MET                        +L PI+DM + +L  +   Q+ T
Sbjct: 329  SNEQGSYVVAMET----------------------FTNLGPIVDMCVVDLERQGQGQLVT 366

Query: 424  LCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL 483
              G     SLRI+R G+ + E A   LPG+   +W ++ + + E D  +V+SF   T VL
Sbjct: 367  CSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDAHRETDNMLVLSFVGQTRVL 425

Query: 484  SI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKR 540
             + GE VEE   +GF+D   +     +    L+Q+  + +R + ++ +  ++EW+ P  +
Sbjct: 426  MLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGK 485

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR 600
             I     N  QVV+A+ G  L Y E+    +L ++   EM  +VACLDI  + +    S 
Sbjct: 486  NISVASCNSSQVVVAV-GRALYYLEI-RPQELRQISCTEMEHEVACLDITPLGDTNGMSP 543

Query: 601  FLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGEDGADHPAS 657
              A+G + D + RIL L   + +  ++L  + +   P S+L    ++S        H   
Sbjct: 544  LCAIGLWTDISARILRLPSFELLHKEMLGGEII---PRSILMTTFESS--------H--- 589

Query: 658  LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLG 717
             +L   L +G LF   + + TG LSD +   LG +P  L +        +   S RP + 
Sbjct: 590  -YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 648

Query: 718  YIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLR 777
            Y    + + + ++ + + Y    +SD   + +     + L + TI+ + +  +   +PL 
Sbjct: 649  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI-QKLHIRTVPLY 707

Query: 778  YTPRRFVLQPKKKLM------VIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQM 831
             +PR+   Q   +        + ++   G  TA    A+ +    +    +  + +    
Sbjct: 708  ESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPH 767

Query: 832  EN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
            E   G++   ++ L  +Q+ +    + +++                     NE A S+ +
Sbjct: 768  ETSFGEEVEVHNLLIIDQHTFEVLHAHQFL--------------------QNEYALSLVS 807

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLAL 949
                 K+  T   VGTA  + +  +     G I ++ +  +GK L+ L + +V+G   ++
Sbjct: 808  CKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFHY-SDGK-LQSLAEKEVKGAVYSM 862

Query: 950  CQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFC 1009
             +F G+LLA I   +RLY+   ++ LR   N       + + T  D I VGD+  S    
Sbjct: 863  VEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLL 922

Query: 1010 KYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTG 1069
             Y+  E      A D  P W++A   +D D   GA+   N++  +  +D +   +E+   
Sbjct: 923  AYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--KDSAATTDEE--- 977

Query: 1070 GKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------PGGGESVIYGTVM 1120
                            ++E+   H+G+ V      SLV         P  G SV++GTV 
Sbjct: 978  -------------RQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQG-SVLFGTVN 1023

Query: 1121 GSLGAMLAFSS---RDDVDFFSHLEMHMRQ----EH---PPLCGRDHMAYRSAYF----- 1165
            G +G + + S       +D  + L   ++     EH   P L      A +S +      
Sbjct: 1024 GMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSLYPSLVQLRAWASQSFHTERKTE 1083

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 1084 PATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKR 1122


>gi|148709424|gb|EDL41370.1| damage specific DNA binding protein 1 [Mus musculus]
          Length = 968

 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 241/1073 (22%), Positives = 442/1073 (41%), Gaps = 137/1073 (12%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
              +  FR  G  KD + + +      ILEY  S    D I       Q+  G+     I+
Sbjct: 62   AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 116  PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                  +DP+ R + +   +    V  L+RD       +  LE  + H I       D  
Sbjct: 122  G----IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVI-------DVK 168

Query: 176  FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
            F   ++           QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 169  F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
            + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220  IAVP---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                 +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F 
Sbjct: 274  --GDMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +   +  D + + S    MET                        +L PI
Sbjct: 325  GSRLGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ +  
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPG 418

Query: 466  DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
             E D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R 
Sbjct: 419  RETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRL 478

Query: 525  IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
            + ++ +  ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  
Sbjct: 479  VSQEPKALVSEWKEPQGKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEH 536

Query: 583  DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLF 639
            +VACLDI  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L 
Sbjct: 537  EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILM 593

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
               ++S        H    +L   L +G LF   +++ TG LSD +   LG +P  L + 
Sbjct: 594  TTFESS--------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTF 641

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                   +   S RP + Y    + + + ++ + + Y    +SD   + +     + L +
Sbjct: 642  RSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI------IETDQGALTAEEREAAKKE 813
             TI+ + +  +   +PL  +PR+   Q   +   +      ++   G  TA    A+ + 
Sbjct: 702  GTIDEI-QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQA 760

Query: 814  CFEAAGMGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
               +    +  + +    E   G++   ++ L  +Q+ +    + +++            
Sbjct: 761  LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------- 809

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
                     NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +G
Sbjct: 810  ---------NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDG 856

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            K L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + 
Sbjct: 857  K-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLK 915

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
            T  D I VGD+  S     Y+  E      A D  P W++A   +D D   G+
Sbjct: 916  TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFTGS 968


>gi|326919947|ref|XP_003206238.1| PREDICTED: DNA damage-binding protein 1-like [Meleagris gallopavo]
          Length = 1079

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 238/1050 (22%), Positives = 436/1050 (41%), Gaps = 148/1050 (14%)

Query: 193  QDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVPGGGDGPSGVLVCA 251
            QD  G+     + +L   E + G       W  E V+  A+M++ VP   +   G ++  
Sbjct: 122  QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIAVP---EPFGGAIIIG 172

Query: 252  ENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTE 302
            +  + Y N         P ++    V   R D    R +L        +  LF  LL+ E
Sbjct: 173  QESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL-----GDMEGRLFMLLLEKE 227

Query: 303  YGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGA 362
                  VTL+       +L+++      +   +  L +G +F  S  G+  L +   +  
Sbjct: 228  EQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVK---LNV 277

Query: 363  DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIF 422
            D + + S    MET                        +L PI+DM + +L  +   Q+ 
Sbjct: 278  DSNEQGSYVVAMET----------------------FTNLGPIVDMCVVDLERQGQGQLV 315

Query: 423  TLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLV 482
            T  G     SLRI+R G+ + E A   LPG+   +W ++ + + E D  +V+SF   T V
Sbjct: 316  TCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDSHHEMDNMLVLSFVGQTRV 374

Query: 483  LSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGK 539
            L + GE VEE   +GF+D   +     +    L+Q+  + +R + ++ +  ++EW+ P  
Sbjct: 375  LMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNG 434

Query: 540  RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            + I     N  QVV+A+ G  L Y E+    +L ++   EM  +VACLDI  + +    S
Sbjct: 435  KNISVASCNSNQVVVAV-GRALYYLEI-RPQELRQINCTEMEHEVACLDITPLGDTNGMS 492

Query: 600  RFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGEDGADHPA 656
               A+G + D + RIL L   + +  ++L  + +   P S+L    ++S        H  
Sbjct: 493  PLCAIGLWTDISARILKLPSFEMLHKEMLGGEII---PRSILMTTFESS--------H-- 539

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
              +L   L +G LF   + + TG LSD +   LG +P  L +        +   S RP +
Sbjct: 540  --YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTV 597

Query: 717  GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
             Y    + + + ++ + + Y    +SD   + +     + L + TI+ + +  +   +PL
Sbjct: 598  IYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI-QKLHIRTVPL 656

Query: 777  RYTPRRFVLQPKKKLM------VIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQ 830
              +PR+   Q   +        + ++   G  TA    A+ +    +    +  + +   
Sbjct: 657  YESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAP 716

Query: 831  MEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
             E   G++   ++ L  +Q+ +    + +++                     NE A S+ 
Sbjct: 717  HETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ--------------------NEYALSLV 756

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLA 948
            +     K+  T   VGTA  + +  +     G I ++ +  +GK L+ L + +V+G   +
Sbjct: 757  SCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFHY-SDGK-LQSLAEKEVKGAVYS 811

Query: 949  LCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHF 1008
            + +F G+LLA I   +RLY+   ++ LR   N       + + T  D I VGD+  S   
Sbjct: 812  MVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLL 871

Query: 1009 CKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1068
              Y+  E      A D  P W++A   +D D   GA+   N++  +  +D +   +E+  
Sbjct: 872  LAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--KDSAATTDEE-- 927

Query: 1069 GGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------PGGGESVIYGTV 1119
                             ++E+   H+G+ V      SLV         P  G SV++GTV
Sbjct: 928  --------------RQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQG-SVLFGTV 972

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF-----PVKDVIDGD 1174
             G +G + +  S    +    ++  + +    +   +H  +RS +      P    IDGD
Sbjct: 973  NGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGD 1031

Query: 1175 LCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            L E F  +S    +++   L    G  +K+
Sbjct: 1032 LIESFLDISRPKMQEVVANLQIDDGSGMKR 1061


>gi|119594340|gb|EAW73934.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_b [Homo
            sapiens]
          Length = 923

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 213/941 (22%), Positives = 399/941 (42%), Gaps = 122/941 (12%)

Query: 297  FLLQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            +LL    G +F + LE + +      + +L+++      +   +  L +G +F  S  G+
Sbjct: 54   YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 113

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
              L +   +  D + + S    MET                        +L PI+DM + 
Sbjct: 114  SQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPIVDMCVV 148

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N E D  
Sbjct: 149  DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDT 207

Query: 472  IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR 530
            +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R + ++ +
Sbjct: 208  LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 267

Query: 531  --INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
              ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  +VACLD
Sbjct: 268  ALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEHEVACLD 325

Query: 589  IASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQAS 645
            I  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L    ++S
Sbjct: 326  ITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILMTTFESS 382

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
                    H    +L   L +G LF   +++ TG LSD +   LG +P  L +       
Sbjct: 383  --------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTT 430

Query: 706  AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
             +   S RP + Y    + + + ++ + + Y    +SD   + +     + L + TI+ +
Sbjct: 431  NVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI 490

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAAGM 820
             +    T +PL  +PR+   Q   +   ++ +     D    T   R +A  +   ++  
Sbjct: 491  QKLHIRT-VPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVS 549

Query: 821  GENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
                  +     +   G++   ++ L  +Q+ +    + +++                  
Sbjct: 550  SSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------------- 592

Query: 878  LQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELL 937
               NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +GK L+ +
Sbjct: 593  ---NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDGK-LQTV 644

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRI 997
             + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  D I
Sbjct: 645  AEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFI 704

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++  +  +
Sbjct: 705  LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--K 762

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------P 1108
            D +   +E+                   ++E+  FH+G+ V      SLV         P
Sbjct: 763  DSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTP 806

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF--- 1165
              G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS +    
Sbjct: 807  TQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERK 864

Query: 1166 --PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
              P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 865  TEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 905


>gi|410045300|ref|XP_508472.4| PREDICTED: DNA damage-binding protein 1 [Pan troglodytes]
          Length = 1107

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 262/1219 (21%), Positives = 486/1219 (39%), Gaps = 183/1219 (15%)

Query: 16   AAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKD 75
            + ++G+F+  +   +++A+   LE+      G +  +    ++G I  +  FR  G  KD
Sbjct: 24   SVLSGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKIAVMELFRPKGESKD 82

Query: 76   YIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIVPGQYLAVDPKGRAV 129
             + + +      ILEY  S    D I       Q+  G+     I+      +DP+ R +
Sbjct: 83   LLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG----IIDPECRMI 138

Query: 130  MIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYS 189
             +   +    V  L+RD       +  LE  + H I         G   P    +     
Sbjct: 139  GLRLYDGLFKVIPLDRDNKELKAFNIRLE--ELHVIDVKFL---YGCQAPTICFVY---- 189

Query: 190  EADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVPGGGDGPSGVL 248
               QD  G+     + +L   E + G       W  E V+  A+M++ VP   +   G +
Sbjct: 190  ---QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIAVP---EPFGGAI 237

Query: 249  VCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
            +  +  + Y N         P ++    V   R D    R +L        +  LF  LL
Sbjct: 238  IIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL-----GDMEGRLFMLLL 292

Query: 300  QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            + E      VTL+       +L+++      +   +  L +G +F  S  G+  L +   
Sbjct: 293  EKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVK--- 342

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            +  D + + S    MET                        +L PI+DM + +L  +   
Sbjct: 343  LNVDSNEQGSYVVAMET----------------------FTNLGPIVDMCVVDLERQGQG 380

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N E D  +V+SF   
Sbjct: 381  QLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDTLVLSFVGQ 439

Query: 480  TLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRT 536
            T VL + GE VEE    GF+D   +     +    L+Q+  + +R + ++ +  ++EW+ 
Sbjct: 440  TRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKE 499

Query: 537  PGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGR 596
            P  + I     N  QVV+A+  G  +Y+      +L ++   EM  +VACLDI  + +  
Sbjct: 500  PQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSN 557

Query: 597  KRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGEDGAD 653
              S   A+G + D + RIL L   + +  ++L  + +   P S+L    ++S        
Sbjct: 558  GLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILMTTFESS-------- 606

Query: 654  HPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSR 713
            H    +L   L +G LF   +++ TG LSD +   LG +P  L +        +   S R
Sbjct: 607  H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDR 662

Query: 714  PWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETA 773
            P + Y    + + + ++ + + Y    +SD   + +     + L + TI+ + +  +   
Sbjct: 663  PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI-QKLHIRT 721

Query: 774  LPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAAGMGENGNGNM 828
            +PL  +PR+   Q   +   ++ +     D    T   R +A  +   ++        + 
Sbjct: 722  VPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSS 781

Query: 829  ---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
                +   G++   ++ L  +Q+ +    + +++                     NE A 
Sbjct: 782  TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ--------------------NEYAL 821

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            S+ +     K+  T   VGTA  + +  +     G I ++++  +GK L+ + + +V+G 
Sbjct: 822  SLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDGK-LQTVAEKEVKGA 876

Query: 946  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQES 1005
              ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  D I VGD+  S
Sbjct: 877  VYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRS 936

Query: 1006 FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE 1065
                 Y+  E      A D  P W++A   +D D   GA+   N++  +  +D +   +E
Sbjct: 937  VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--KDSAATTDE 994

Query: 1066 DPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGA 1125
            +                   ++E+  FH+G+ V      SLV           +   L  
Sbjct: 995  E----------------RQHLQEVGLFHLGEFVNVFCHGSLV-----------MQNRLNK 1027

Query: 1126 MLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLD 1185
            ++    + +  F+       + E                 P    IDGDL E F  +S  
Sbjct: 1028 VIKSVGKIEHSFWRSFHTERKTE-----------------PATGFIDGDLIESFLDISRP 1070

Query: 1186 LQRKIADELDRTPGEILKK 1204
              +++   L    G  +K+
Sbjct: 1071 KMQEVVANLQYDDGSGMKR 1089


>gi|119594343|gb|EAW73937.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_e [Homo
            sapiens]
          Length = 896

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 212/941 (22%), Positives = 399/941 (42%), Gaps = 122/941 (12%)

Query: 297  FLLQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            +LL    G +F + LE + +      + +L+++      +   +  L +G +F  S  G+
Sbjct: 27   YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 86

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
              L +   +  D + + S    MET                        +L PI+DM + 
Sbjct: 87   SQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPIVDMCVV 121

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N E D  
Sbjct: 122  DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDT 180

Query: 472  IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR 530
            +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R + ++ +
Sbjct: 181  LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 240

Query: 531  --INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
              ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  +VACLD
Sbjct: 241  ALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEHEVACLD 298

Query: 589  IASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQAS 645
            I  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L    ++S
Sbjct: 299  ITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILMTTFESS 355

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
                    H    +L   L +G LF   +++ TG LSD +   LG +P  L +       
Sbjct: 356  --------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTT 403

Query: 706  AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
             +   S RP + Y    + + + ++ + + Y    +SD   + +     + L + TI+ +
Sbjct: 404  NVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI 463

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAAGM 820
             +  +   +PL  +PR+   Q   +   ++ +     D    T   R +A  +   ++  
Sbjct: 464  -QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVS 522

Query: 821  GENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
                  +     +   G++   ++ L  +Q+ +    + +++                  
Sbjct: 523  SSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ----------------- 565

Query: 878  LQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELL 937
               NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +GK L+ +
Sbjct: 566  ---NEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDGK-LQTV 617

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRI 997
             + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  D I
Sbjct: 618  AEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFI 677

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++  +  +
Sbjct: 678  LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--K 735

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------P 1108
            D +   +E+                   ++E+  FH+G+ V      SLV         P
Sbjct: 736  DSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTP 779

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF--- 1165
              G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS +    
Sbjct: 780  TQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERK 837

Query: 1166 --PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
              P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 838  TEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 878


>gi|348681092|gb|EGZ20908.1| hypothetical protein PHYSODRAFT_259403 [Phytophthora sojae]
          Length = 1137

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 278/1269 (21%), Positives = 503/1269 (39%), Gaps = 236/1269 (18%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFG 59
            Y Y  T Q+PT +  ++   F+G     +++A+    E  LL PE    +       ++G
Sbjct: 3    YNYVATAQKPTSVTHSLTAAFTGPNDTNLLLAKSTRFEVHLLTPEG---LSPQHDVNLYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVF-DKIH---QETFGKSGCRRIV 115
             I     FR     +D++ + +   +  +L Y+ +   F  K H   +++ G+S    + 
Sbjct: 60   RIAIFEVFRALNEPQDWLFIVTQRFQFCVLAYDAAAQQFVTKAHGSIRDSIGRS-SEIVT 118

Query: 116  PGQYLAVDPKGRAVMIGACEKQ-KLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC 174
             G    +DP+GR + +   E   K++ + +     + T +  L+  +   I +       
Sbjct: 119  SGN---IDPEGRLIGMNLYEGYFKVIPIDSGKGILKDTFNIRLDELRVIDIKFL-----H 170

Query: 175  GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR-KWSEP-VDNGAN 232
            G+  P    +  DY             +A +++  Y + L     +   WS+  V++GA+
Sbjct: 171  GYTKPTICVLYEDY-------------KAARHIKTYHILLKEKDFAEGPWSQSNVESGAS 217

Query: 233  MLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQK 292
            +L+ VP       GVL+ +   ++Y N               +P +  V+ V  A  +  
Sbjct: 218  LLIPVPAP---VGGVLIVSNQTIVYHNGSTFHA---------IPMQSTVIQVYGAVDKDG 265

Query: 293  TLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            + F  LL  +YG +  V L+H  + V+ + ++      + + +  L +G +F  S FG+ 
Sbjct: 266  SRF--LLADQYGTLSVVALQHTGKEVTGVHLEVLGETNIASCLSYLDNGVVFIGSTFGDS 323

Query: 353  ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
             L +   + AD D   S   +++T                        ++ PI+D  + +
Sbjct: 324  QLIK---LNADRDENGSYIEVLDT----------------------YVNVGPIIDFCVMD 358

Query: 413  LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            L  +   QI T  G     +LR++R G+ ++E A ++LPG+   +W +++    E D Y+
Sbjct: 359  LDRQGQGQIVTCSGADKDGTLRVIRNGIGINEQASAELPGI-KGMWALRETFAAEHDKYL 417

Query: 473  VVSFNNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR 530
            + S+ +   +L+IG  + +EE     F +    L  ++ G D  +QV  S +R I     
Sbjct: 418  LQSYVSEIRILAIGDEDEMEEKEIPAFTNVKTLLCRNMYG-DVWLQVTESEVRLISCTSL 476

Query: 531  INEWRT--PGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
                    P    I    +N  QV +A SGG L+Y EV+  GQ+ E  K +M  ++AC+D
Sbjct: 477  SLSSTWSPPLGSRITVAAANPTQVAVATSGGVLVYLEVE-NGQVTEKTKVKMEHEIACVD 535

Query: 589  IASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL----SVQSVSSPPESLLFLEVQA 644
            I  +   +     +A+        + +L+   C+  L    SV  +  P    L  E   
Sbjct: 536  ITPLARSQATDGDVAMTGSSTHWDMAALNSSICVVGLWTNFSVSVLKLPTLEKLTTE--- 592

Query: 645  SVGGE-----------DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
            S+G +           +G D     +L  GL +G L    +++  G L   +   LG +P
Sbjct: 593  SLGTDLLPRSVLCNTFEGKD-----YLLVGLGDGSLMNYELNVAQGTLGTRKRVSLGSQP 647

Query: 694  PKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVA 753
              L +        +     RP + Y    + L + ++ + +     F S+   E +   +
Sbjct: 648  LSLSTFRSKNMTHVFAACDRPTVIYSSNNKLLYSNINSKEVNVMCPFDSESFPECLALSS 707

Query: 754  GNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKE 813
               L + T++ + +   +T   L    RR    P+   +       G LT          
Sbjct: 708  EEELTIGTVDDIQKLHIQT-FHLNEWARRIAHDPESHTL-------GVLTVS-------- 751

Query: 814  CFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT 873
             F     GE     +DQ                  G+           +R+ D ++    
Sbjct: 752  -FTVDDTGE----EVDQ------------------GF-----------VRLFDDQTFEVL 777

Query: 874  CLLELQDNEAAFSICTVNFH-DKEHGTLLAVGTAKGLQFWPKRNIVAGYIH--------- 923
                L   E   S+    F  D   G+   VGTA              YIH         
Sbjct: 778  HSYRLDPFETPSSVVVCPFSGDSSSGSYFVVGTA--------------YIHEDEAEPHQG 823

Query: 924  -IYRFVEEG----KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL-----GKKR 973
             I  F   G    + L+L+ + +V+G    L  F G++LAG+    +LY        +K 
Sbjct: 824  RILVFAVTGIHGERKLQLVTEKEVKGAVYCLNAFNGKVLAGVNSKAQLYKWSENTDNEKE 883

Query: 974  LLRKCENKLFPNTIVSINTYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTA 1032
            L+ +C +  + +T+V     R D I VGD+ +S     Y++ +  +   A D    W++A
Sbjct: 884  LVSECGH--YGHTLVLYMESRGDFIVVGDLMKSVSLLSYKQLDGTIEEIAKDLNSNWMSA 941

Query: 1033 AHHIDFDTMAGADKFGNIYFV-RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQ 1091
               +D DT  G++   N++ V R     SDE            E+G+L       E + +
Sbjct: 942  LGIVDDDTYIGSETDFNLFTVQRNSGAASDE------------ERGRL-------ETVGE 982

Query: 1092 FHVGDVVTSLQKASLVPGGG--------------------ESVIYGTVMGSLGAMLAFSS 1131
            FH+G+ V   +  SL P                       +S+++GTV G +G +L   +
Sbjct: 983  FHLGEFVNRFRYGSLTPAAAGPTDMVDVVEQAPIVPAAQNQSMLFGTVSGMIGVILPL-T 1041

Query: 1132 RDDVDFFSHLEMHMRQEHPPLCGRDHMAY-----RSAYFPVKDVIDGDLCEQFPTLSLDL 1186
            +D   F   ++  + Q    + G  H  +     R +    ++ IDGDL E F  L    
Sbjct: 1042 KDQYSFLLRVQQALTQVVKGVGGFSHKDWRMFENRRSVSEARNFIDGDLVESFLDLPKAQ 1101

Query: 1187 QRKIADELD 1195
              K+ D+L+
Sbjct: 1102 MTKVVDKLN 1110


>gi|194389106|dbj|BAG61570.1| unnamed protein product [Homo sapiens]
          Length = 1009

 Score =  193 bits (490), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 213/941 (22%), Positives = 399/941 (42%), Gaps = 122/941 (12%)

Query: 297  FLLQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            +LL    G +F + LE + +      + +L+++      +   +  L +G +F  S  G+
Sbjct: 140  YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 199

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
              L +   +  D + + S    MET                        +L PI+DM + 
Sbjct: 200  SQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPIVDMCVV 234

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N E D  
Sbjct: 235  DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDT 293

Query: 472  IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR 530
            +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+  + +R + ++ +
Sbjct: 294  LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 353

Query: 531  --INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
              ++EW+ P  + I     N  QVV+A+  G  +Y+      +L ++   EM  +VACLD
Sbjct: 354  ALVSEWKEPQAKNISVASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEHEVACLD 411

Query: 589  IASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQAS 645
            I  + +    S   A+G + D + RIL L   + +  ++L  + +   P S+L    ++S
Sbjct: 412  ITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII---PRSILMTTFESS 468

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
                    H    +L   L +G LF   +++ TG LSD +   LG +P  L +       
Sbjct: 469  --------H----YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTT 516

Query: 706  AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
             +   S RP + Y    + + + ++ + + Y    +SD   + +     + L + TI+ +
Sbjct: 517  NVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI 576

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIET------DQGALTAEEREAAKKECFEAAG 819
             +  +   +PL  +PR+   Q   +   ++ +        G  TA    A+ +    +  
Sbjct: 577  -QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQGTSGGTTALRPSASTQALSSSVS 635

Query: 820  MGENGNGNMDQMEN--GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
              +  + +    E   G++   ++ L  +Q+ +    + +++                  
Sbjct: 636  SSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL------------------ 677

Query: 878  LQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELL 937
               NE A S+ +     K+  T   VGTA  + +  +     G I ++++  +GK L+ +
Sbjct: 678  --QNEYALSLVSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDGK-LQTV 730

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRI 997
             + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  D I
Sbjct: 731  AEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFI 790

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N +  +  +
Sbjct: 791  LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNSFVCQ--K 848

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------P 1108
            D +   +E+                   ++E+  FH+G+ V      SLV         P
Sbjct: 849  DSAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTP 892

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF--- 1165
              G SV++GTV G +G + +  S    +    ++  + +    +   +H  +RS +    
Sbjct: 893  TQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERK 950

Query: 1166 --PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
              P    IDGDL E F  +S    +++   L    G  +K+
Sbjct: 951  TEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKR 991



 Score = 45.4 bits (106), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 22/169 (13%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
           Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLA 121
             +  FR  G  K  + + +      ILEY  S    D I QE+       +     YLA
Sbjct: 62  AVMELFRPKGESKGLLFILTAKYNACILEYKQSGESIDIIGQESITYHNGDK-----YLA 116

Query: 122 ----------------VDPKGRAVMIGACEKQKLVYVLNRDTAARLTIS 154
                           VDP G   ++G  E +  + +L ++     T++
Sbjct: 117 IAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVT 165


>gi|238590334|ref|XP_002392284.1| hypothetical protein MPER_08162 [Moniliophthora perniciosa FA553]
 gi|215458122|gb|EEB93214.1| hypothetical protein MPER_08162 [Moniliophthora perniciosa FA553]
          Length = 276

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/282 (36%), Positives = 152/282 (53%), Gaps = 17/282 (6%)

Query: 657 SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
           +LF+N GLQNGVL RTV+D + GQL+D+R+RFLG RP KL  V      A+L LSSR WL
Sbjct: 12  TLFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLIRVQTQRNPAILALSSRSWL 71

Query: 717 GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPL 776
            Y H+     TPL +E+ +YA SFS++   EG++ + G+ LR+F I +LG    + ++PL
Sbjct: 72  NYTHQNLMHFTPLIFESFDYAWSFSAELSPEGLIGITGSTLRIFQIPKLGTKLKQDSIPL 131

Query: 777 RYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDD 836
            YTPR+ +  P  +   +IE D   L     +  +K   E    G+              
Sbjct: 132 SYTPRKLITHPTNQYFYLIEGDHRILG---EDVVEKRLAELRAQGK------------PI 176

Query: 837 ENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE 896
           + +   L  E +G P+A +  W S IR++DP  A T   + L  NEA FS+  V+   KE
Sbjct: 177 DEEVLALPPEVFGRPRASAGNWGSAIRIIDPIEAKTVAYIPLDSNEAGFSLAVVHSQLKE 236

Query: 897 HGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
              +L++  A+ L     R+  +G+   Y+F E+G     +H
Sbjct: 237 ESYILSL--ARQLTPCIARSCSSGFFATYKFTEDGAGAGFVH 276


>gi|301121252|ref|XP_002908353.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
 gi|262103384|gb|EEY61436.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
          Length = 1150

 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 279/1275 (21%), Positives = 504/1275 (39%), Gaps = 235/1275 (18%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFG 59
            Y Y  T Q+PT +  ++   F+G     +++A+    E  LL PE    ++      ++G
Sbjct: 3    YNYVATAQKPTSVTHSLTAAFTGANDTNLLLAKSTRFEVHLLTPEG---LQPQHDINLYG 59

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPS-KNVFDKIH---QETFGKSGCRRIV 115
             I     FR     +D+I + +   +  +L Y+ S + V  K H   +++ G+S    + 
Sbjct: 60   RIAIFEVFRAANEPQDWIFIVTQRFQFCVLAYDSSAQQVVTKAHGSIRDSIGRSS-EIVT 118

Query: 116  PGQYLAVDPKGRAVMIGACEKQ-KLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC 174
             G    +DP+GR + +   E   K++ + +     R T +  L+  +   I +       
Sbjct: 119  SGN---IDPEGRLIGMNLYEGYFKVIPIDSGKGILRDTFNIRLDELRVIDIKFL-----H 170

Query: 175  GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANM 233
            G++ P    +  DY  A    T         ++   E D         WS+  V++GA++
Sbjct: 171  GYNKPTICVLYEDYKAARHVKT--------YHILLKEKDFA----EGPWSQSNVESGASL 218

Query: 234  LVTVPGGGDGPSG-VLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQK 292
            L+ VP     P+G VL+ +   ++Y N               +P +  V+ V  A  +  
Sbjct: 219  LIPVPA----PTGGVLIVSNQTIVYHNGSTFHA---------IPMQSTVIQVYGAVDKDG 265

Query: 293  TLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            + F  LL  +YG +  V L+H  + VS + ++      + + +  L +G +F  S FG+ 
Sbjct: 266  SRF--LLADQYGTLSVVALQHTGKEVSGVHLEVLGETNIASCLSYLDNGVVFIGSTFGDS 323

Query: 353  ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLM---PIMDMR 409
             L +   + AD D   S                          IE ++S +   PI+D  
Sbjct: 324  QLIK---LNADRDETGS-------------------------YIEVLDSYVNVGPIIDFC 355

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
            + +L  +   QI T  G     +LR++R G+ ++E A ++LPG+   +W +++    E D
Sbjct: 356  VMDLDRQGQGQIVTCSGADKDGTLRVIRNGIGINEQASAELPGI-KGMWALRETFAAEHD 414

Query: 470  AYIVVSFNNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
             +++ S+ +   +L+IG  + +EE     F +    L  ++ G D  +QV  S +R I  
Sbjct: 415  KFLLQSYVSEVRILAIGDEDEMEEKEIPAFTNVKTLLCRNMYG-DYWLQVTESEVRLISC 473

Query: 528  DGRINEWR---TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV 584
                         G R  V   +N  QV +A SGG L+Y E++  GQ++E    +M  ++
Sbjct: 474  SSFSLSSTWSPASGSRITV-AAANPTQVAVATSGGVLVYLEIE-NGQVVEKTTVKMEHEL 531

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDC------------MQILSVQSVSS 632
            AC+DI  +         +A+        + +L    C            +Q+ +++  ++
Sbjct: 532  ACVDITPLTSSGAGDGDVAMTGSSTHWDMAALRSTLCVVGLWTSFSVCVLQLPTLEKRTT 591

Query: 633  PPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLR 692
                   L         +G D     +L  GL +G L    +D+  G L   +   LG +
Sbjct: 592  EALGTDLLPRSVLCNTFEGKD-----YLLVGLGDGSLMNYELDVQQGALGTRKRVSLGSQ 646

Query: 693  PPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSV 752
            P  L +        +     RP + Y +  + L + ++ + +     F S+   E +   
Sbjct: 647  PLSLSTFRSKNMTHVFAACDRPTVIYSNNNKLLYSNINSKEVNVMCPFDSESFPECLALS 706

Query: 753  AGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK----LMVIIETDQGALTAEERE 808
            +   L + T++ + +   +T   L    RR    P+      L V    D    T EE +
Sbjct: 707  SEEELTIGTVDDIQKLHIQT-FHLNEWARRIAHDPESHTLGVLTVSFTVDD---TGEEVD 762

Query: 809  AAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR 868
                  F+            DQ        + DP                  C  V+ P 
Sbjct: 763  QGFVRLFD------------DQTFEVLHSYRLDPFE--------------TPCSVVVCPL 796

Query: 869  SANTTCLLELQDNEAAFSICTVNFHDKE---HGTLLAVGTAKGLQFWPKRNIVAGYIHIY 925
            + ++        N + F + T   H++E   H   + V    G             IH  
Sbjct: 797  AGDSV-------NASYFVVGTAYIHEEEAEPHQGRILVFAVTG-------------IHGE 836

Query: 926  RFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL-----GKKRLLRKCEN 980
            R       L+L+ + +V+G    L  F G++LAG+    +LY        +K L+ +C +
Sbjct: 837  R------KLQLVTEKEVKGAVYCLNSFNGKVLAGVNSKAQLYKWSENTDNEKELVSECGH 890

Query: 981  KLFPNTIVSINTYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD 1039
              + +T+V     R D I VGD+ +S     Y++ +  +   A D    W++A   +D D
Sbjct: 891  --YGHTLVLYMESRGDFIVVGDLMKSISLLSYKQLDGTIEEIAKDLNSNWMSAVGIVDDD 948

Query: 1040 TMAGADKFGNIYFV-RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
            T  G++   N++ V R     SDE            E+G+L       E + +FH+G+ V
Sbjct: 949  TYIGSETDFNLFTVQRNSGAASDE------------ERGRL-------ETVGEFHLGEFV 989

Query: 1099 TSLQKASLV----------PGG-----------------------GESVIYGTVMGSLGA 1125
               +  SLV          P G                        +S+++GTV G +G 
Sbjct: 990  NRFRYGSLVMQNSSSTSQTPSGVVSTGPTAMVDVGESAPAAPVVQNQSMLFGTVSGMIGV 1049

Query: 1126 MLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFP 1180
            +L   S+D   F   ++  +      + G  H  +R+     +    ++ IDGDL E F 
Sbjct: 1050 ILPI-SKDQYSFLLRVQQALTHVVKGVGGFSHKDWRTFENRRSVSEARNFIDGDLVESFL 1108

Query: 1181 TLSLDLQRKIADELD 1195
             L      K+ D+L+
Sbjct: 1109 DLPKPQMTKVVDKLN 1123


>gi|340381612|ref|XP_003389315.1| PREDICTED: DNA damage-binding protein 1-like [Amphimedon
            queenslandica]
          Length = 1142

 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 289/1264 (22%), Positives = 525/1264 (41%), Gaps = 185/1264 (14%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            Y Y +T  + T +  ++ GNF+G     ++ A+G  L +    + G ++ ++  ++FG I
Sbjct: 3    YNYIVTAHKATAVPLSVTGNFTGPDDLNLIQAKGSNLAVSLVTSEG-LKPVLDVDVFGRI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN---------VFDKIHQETFGKSGCR 112
             ++  FR  G + D + + +    + I+ Y+P  N         + +++ + T GK+   
Sbjct: 62   LAIQLFRPQGERMDLLFILTARYHVAIVGYDPIANDVLTRAYGDIKERVGKPTLGKN--- 118

Query: 113  RIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGI 172
                     VDP  + + +     Q  +  L  D+       SPL+A         I  I
Sbjct: 119  ------VAMVDPSCQLIALHLYTGQLKIVPLQFDSG------SPLKAFNIRLEDLYITDI 166

Query: 173  DC--GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDN 229
                G +NP  A I    SE    +TG+      K     + D  L  +   W    ++ 
Sbjct: 167  QFLHGTENPTIAYI----SEEPSVATGRVL----KTFVISQRDKEL--LPGPWKPNTIEG 216

Query: 230  GANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL----PAERGVLIVS 285
             A++L +VP   +G   ++V   + V Y N     V  ++ + + +    P +    ++ 
Sbjct: 217  QASLLCSVPSPYNG---LIVVGADSVAYFNDTSHTVDPIVIKESVISCIEPLDHSRYLLG 273

Query: 286  AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                R  TLF           F   +E    ++  +K++    I +  ++  L +G +F 
Sbjct: 274  DFRGRLLTLFLE---------FSEEMESGMTNIVNMKLEVLGEISIPHTLSYLDNGVVFV 324

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L           V+ SSS L     G+  V            +E + ++ PI
Sbjct: 325  GSTKGDSQL-----------VKLSSSPL--ENGGYIDV------------LESMTNIGPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK-KNV 464
            +DM + +L ++    +    G G   +LRI++ G+ ++E A   LPG+   +W++K    
Sbjct: 360  LDMSVVDLDKQGRDVLVCCSGLGKDGALRIVKSGIGINEAASIDLPGI-KGIWSLKCAGR 418

Query: 465  NDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
             DE D  +V++F   T+ L + GE VEE      +    +   S +  ++++Q+    +R
Sbjct: 419  EDELDDTVVLTFVGQTMALRLAGEEVEETELPALVTDQQTFYCSNVTGNAIIQITTKSVR 478

Query: 524  HIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD--MTGQLLEVEKHE 579
             + +     I +W  P  R I     N  QV++A+ G +L Y EV     G+LL +    
Sbjct: 479  LMDDKAMELICDWSPPDGRGISTAACNSSQVMVAV-GCDLYYLEVKPGSPGELLLISHTT 537

Query: 580  MSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PES 636
            MS +VACLDI  + E    S   AVG + D +++IL++      + L  Q +     P S
Sbjct: 538  MSHEVACLDINPLSEA-GTSSLCAVGLWTDISVQILNVPQ---FEHLFTQPLGGDIIPRS 593

Query: 637  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
            +L +E    +GG        + +L   L +G L    +D  TGQL   +   LG +P  L
Sbjct: 594  VLMVE----LGG--------ACYLLCALGDGCLHYYTMDSETGQLRGGKRVVLGTKPIVL 641

Query: 697  FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
                  G  ++   S  P + +    + L + ++ + + Y  + +S+     +  V  + 
Sbjct: 642  KQFKSDGVTSVFACSDHPTIIHFSNQKLLFSNVNVKEVNYICTLNSEAFQNSLALVDSST 701

Query: 757  LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI--IETDQGALTAEEREAAKKEC 814
            L    ++++     ET +PL  +PR    Q   +  ++    TD+     +      ++ 
Sbjct: 702  LIFGCVDQIQMLHIET-IPLGESPRCIAYQESSQTFLVGGYRTDKSG--PDNTYTPSRQS 758

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                           +  N         L+ E++  P+ E    +    + D  + + + 
Sbjct: 759  VST------------RTSNVSVAVVPPQLNIEEFKCPQVEMHSLI----LFDQTTFDVSH 802

Query: 875  LLEL--QDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK 932
            + +L  Q++    + C +  +D+E  ++  VGTA  L    ++    G I ++  V  GK
Sbjct: 803  VYQLCPQEHILCVTSCNLTTNDEER-SVYVVGTA--LVKPEEKESSTGRILVFA-VNSGK 858

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVS--I 990
             LELLH+    G    +  F G++L  +   + +  L    L  +C  K   N I++  +
Sbjct: 859  -LELLHEKLENGAVFQVLGFNGKILNSVNSGVFVNALVDGALKEECAYK---NNILALYL 914

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSV-PRWLTAAHHIDFDTMAGADKFGN 1049
             T  D I VGDI  S     Y+ +     I  D ++ P + TA   ID +   GAD   +
Sbjct: 915  KTKGDFILVGDILRSLKLLVYKEELGLEEIGVDHNISPCFCTAIEMIDDENYLGADG-RH 973

Query: 1050 IYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-- 1107
            I+  +   + + E +       +   Q      P++M      + GD V    + S V  
Sbjct: 974  IFICQKNTEATSEAD------LLYMVQ------PSRM------YFGDNVNVFSRGSFVMD 1015

Query: 1108 -PGGGES-------VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMA 1159
             PG G S       +++GTV G++G ++   + D     S L+  M      +   +H  
Sbjct: 1016 HPGAGASSLLQGKPILFGTVHGAIG-LIGTLNMDTYTLLSKLQQKMAANIKSVGNIEHEI 1074

Query: 1160 YRS-----AYFPVKDVIDGDLCEQF-----PTLSLDLQR-KIAD----ELDRTPGEILKK 1204
            YRS        P    IDGDL E+F     P +S  +Q  K  D    E+D +  +ILK 
Sbjct: 1075 YRSFSNEHRSKPFAGFIDGDLVEKFLELPRPQMSQIVQGIKTTDVTGTEVDVSVDDILKL 1134

Query: 1205 LEEI 1208
            +E++
Sbjct: 1135 IEDL 1138


>gi|324502823|gb|ADY41238.1| DNA damage-binding protein 1, partial [Ascaris suum]
          Length = 1129

 Score =  186 bits (473), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 224/922 (24%), Positives = 382/922 (41%), Gaps = 113/922 (12%)

Query: 297  FLLQTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            +LL    G IF + L+ D        V +LK++      +   +  L +G +F  S FG+
Sbjct: 268  YLLGDLSGRIFMLLLDLDVATDGTASVKDLKVELLGETSIPECVVYLDNGVVFIGSRFGD 327

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
              L + ++   +P  + S  +LM+T                        +L PI DM + 
Sbjct: 328  SQLVRLRS---EPCPDGSYISLMDT----------------------YVNLAPIRDMVVI 362

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            N   ++  Q+ T  G     SLRI+R G+ + E+A  +LPGV  A++T+  NV  E D Y
Sbjct: 363  NADGQQ--QVITCSGAFKDGSLRIIRNGIGIEELASVELPGV-KALFTL--NVESELDDY 417

Query: 472  IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR 530
            +VV F + T +L I GE +E+    GF  T  +L    +G   + Q+ P  +  I   G 
Sbjct: 418  LVVGFVDETHILKISGEELEDTQLPGFSTTEQTLWAGRVGSGGIAQITPLKVVLILR-GN 476

Query: 531  INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIA 590
               W  P + ++V V     QVV+A  G +L Y    +T ++  +   E   ++AC+D+ 
Sbjct: 477  TLTWEPPSRISVVSVNELSGQVVLA-CGNQLHYLL--LTDKITPITNIECEFEIACIDVG 533

Query: 591  SVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGE 649
             V +    S+  AV  + D ++ + SL PD    +           SLL   ++  V   
Sbjct: 534  CVGD-EIESKLCAVAYWTDMSVALRSL-PDLNEIVREKCGGEMLARSLLICMMEGIV--- 588

Query: 650  DGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLC 709
                     +L   L +G L+   +DM +G L+  +   LG +P  L   +  G   +  
Sbjct: 589  ---------YLLVALGDGTLYYYQIDMNSGALTQPKKATLGTQPTTLKKFMSRGARNVFA 639

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + + + ++ + + +  + +S    + +V   G  L +  I+ + +  
Sbjct: 640  CSDRPTVIYSSSQKLVFSNVNLKLVAHMCALNSATYTDSLVMTDGQTLVIGRIDDIQKLH 699

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAG-MGENGNGNM 828
              T +PL  +  R   QP+   + I+      + A+     K  C   A  M  N + + 
Sbjct: 700  IRT-VPLGESVSRIAYQPETGTIAILVQRNEFVDAD----GKHHCGHCASKMAVNASSSH 754

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
              +         +P   E            VS + V D  +       EL  NE A SI 
Sbjct: 755  PSVVTSATTPPIEPEEIE------------VSSVVVFDANTLEILHSHELGKNELAMSIK 802

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV--EEGKSLELLHKTQVEGIP 946
            +    D       AVGTA  L    +    +G + I++     EG  + L+H  +++G  
Sbjct: 803  SCVLGDDPQ-PYYAVGTAVVLTDETESK--SGRLLIFQVAPSSEGGRMRLVHDKEIKGAA 859

Query: 947  LALCQFQGRLLAGIGPVLRLYDLGKKRLLR-KCENKLFPN-TIVSINTYRDRIYVGDIQE 1004
             ++    G+L+  I   +RL++   ++ LR +C +  F N T + + T  D + VGD+  
Sbjct: 860  YSIQVLMGKLVVAINSCVRLFEWTAEKELRLECSD--FDNVTALYLRTKNDVVLVGDLMR 917

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S     Y+  E+     A D V  W+TA   ID +T  GA+   N++ V           
Sbjct: 918  SLSVLAYKPMESSFEKIARDFVTNWMTACEIIDMETFLGAEIMFNLFTV----------- 966

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVIYG 1117
                   +K    K  G   +++E   +++G+ V +    SL+       P     ++YG
Sbjct: 967  -------VKDCSSKDEGIRLQLQETGMYYLGESVNAFCHGSLIATHIDLTPSFTTPILYG 1019

Query: 1118 TVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKD-----VID 1172
            T  G LG ++  + +   DF   LE  +          +H  YR+     +       ID
Sbjct: 1020 TSDGGLGVIVQLTPQ-FYDFVHELETRIAAVTKNCMRIEHGQYRTFESDGRTEQSVGFID 1078

Query: 1173 GDLCEQFPTLSLDLQRKIADEL 1194
            GDL E    +S D   K+ D L
Sbjct: 1079 GDLVEGLLDMSRDSVEKLIDGL 1100


>gi|443707495|gb|ELU03057.1| hypothetical protein CAPTEDRAFT_148808 [Capitella teleta]
          Length = 1084

 Score =  186 bits (472), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 223/933 (23%), Positives = 393/933 (42%), Gaps = 107/933 (11%)

Query: 297  FLLQTEYGDIFKVTLEHDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGN 351
            ++L    G +F + LE +        V ++K++      +   +  L +G ++  S  G+
Sbjct: 216  YMLGDMAGRLFMLLLEKEERIDGSMAVKDIKVELLGESAIAECITYLDNGVVYVGSRLGD 275

Query: 352  HALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA 411
              L +   +  + D   S   +MET                        +L P++DM + 
Sbjct: 276  SQLVK---LNVEADDSGSYVQVMET----------------------FTNLGPVVDMCVV 310

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
            +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ +   + D  
Sbjct: 311  DLERQGQGQLVTCSGGYKEGSLRIIRNGIGIHEHATIDLPGI-KGMWPLRVDSPTQ-DDM 368

Query: 472  IVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI--RED 528
            IV+SF   T VL + GE VEE    GF     +     +    L+Q+  + +R +  R  
Sbjct: 369  IVLSFVGQTRVLLLSGEEVEETELGGFEADQQTFFCGNVAHSQLLQITAASVRLVDPRTK 428

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
              ++EWR P  + +   G N  QVV A+S  E+   ++   G L+      M  +VAC+D
Sbjct: 429  KLLSEWRPPSGKNLSVAGCNHCQVVCAVS-REVFCLDIQQ-GALILQGSTTMEHEVACVD 486

Query: 589  IASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQAS 645
            I  + +    S+  AVG + D + RIL L   + +  ++L  + +   P S+L     A+
Sbjct: 487  ITPLNDESGPSQLCAVGLWTDISARILQLPSLEQLHQEMLGGEII---PRSILL----AT 539

Query: 646  VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
              G +        ++   L +G LF   +   TG LSD +   LG +P  L +    G  
Sbjct: 540  FEGVN--------YVLCALGDGALFYFHLQPSTGVLSDRKKVTLGTQPTVLRTFKSPGTT 591

Query: 706  AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
             +   S RP + Y    + + + ++ + + Y    +S+   + +       L + TI+ +
Sbjct: 592  NVFACSDRPTVVYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANDCTLTIGTIDEI 651

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
             +  +   +PL  TPRR   Q   +   +I T +  L         +       +  + +
Sbjct: 652  -QKLHIRNVPLGETPRRIAYQEASQTFGVI-TLRSDLQDSNGSTPARPSASTQALSTSSS 709

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
             N+  M    + N      DE            V  + VLD  +       +L   E A 
Sbjct: 710  SNVKVMA-ASNANTEHTFGDE----------VEVHSLLVLDQHTFEVLHSHQLMQYEFAT 758

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGI 945
            ++ +  F  ++  T   VGTA  + +  +     G I ++RF  +GK  ++  K +++G 
Sbjct: 759  ALMSGRF-GEDPTTYYVVGTA--MVYPEEAEPKQGRIIVFRF-HDGKLTQVAEK-EIKGA 813

Query: 946  PLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGDIQE 1004
               L +F G+LLA I   +RL++   ++ LR  E   F N I + + T  D I VGD+  
Sbjct: 814  AYTLTEFNGKLLASINSTVRLFEWTAEKELR-VECSYFNNIIALYLKTKGDFILVGDLMR 872

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            S     Y+  E      A D  P W+T+   +D DT  GA+   NI+  +  +D +   +
Sbjct: 873  SVTLLSYKPMEGCFEEIARDYNPNWMTSIDVLDDDTFLGAENSFNIFTCQ--KDSAATTD 930

Query: 1065 EDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---PGGGE-----SVIY 1116
            E+                   ++E+  +H+G+ V   +  SLV   PG        SV++
Sbjct: 931  EE----------------RQHLQEVGLYHLGEFVNVFRHGSLVMQHPGECTSPTQGSVLF 974

Query: 1117 GTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF-----PVKDVI 1171
            GTV G+LG +     ++   F   ++  + +    +   +H  +RS +      P    I
Sbjct: 975  GTVNGALGLVTQL-PQEFYLFLLEVQNKLAKTIKSVGKVEHAFWRSFHTERKTEPATGFI 1033

Query: 1172 DGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            DGDL E F  LS D  +++   L    G  +K+
Sbjct: 1034 DGDLIESFLDLSRDKMQEVVQGLQMDDGSGMKR 1066



 Score = 45.4 bits (106), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 2  YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFG 59
          Y Y +T  +PT + A + GNF+ TK   +++A+   LE  ++ PE    I+ +    I+G
Sbjct: 3  YNYVVTAHKPTAVTACVTGNFTSTKDLNLIIAKNTRLEVYVVTPEGLRPIKEI---GIYG 59

Query: 60 AIRSLAQFRLTGSQKDYIVVGSDSGRIVILE 90
           I  L  FR  G  KD + + +     +ILE
Sbjct: 60 RIAVLELFRPPGESKDLLFLLTARYNAMILE 90


>gi|322787057|gb|EFZ13281.1| hypothetical protein SINV_13198 [Solenopsis invicta]
          Length = 986

 Score =  186 bits (471), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 247/1083 (22%), Positives = 450/1083 (41%), Gaps = 124/1083 (11%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT + A + GNF+      +++A+   LE  L+ PE    +  L    I+G I
Sbjct: 5    YVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEG---LRPLKEVGIYGKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVPGQ 118
              +  FR    +KD + + +     +ILE         +  K H     + G +    G 
Sbjct: 62   AIIKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEDIEIITKAHGNVADRIG-KASETGI 120

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
               +DPK R + +   +    +  L++D       S  ++  +   + +       G  N
Sbjct: 121  KAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFL-----HGCAN 175

Query: 179  PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTV 237
            P    I        QD  G+     + NL   E           W  + V+  A M++ V
Sbjct: 176  PTLILIH-------QDINGRHVKTHEINLRDKEFS------KIPWRQDNVEREAMMVIPV 222

Query: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
            P       G ++  +  ++Y + G+  V AV+P     P  +   I   A    + L  +
Sbjct: 223  PS---PMCGAIIIGQESILYHD-GNSYV-AVVP-----PIIKQSTITCYAKVDNQGL-RY 271

Query: 298  LLQTEYGDIFKVTLEHDNE-----HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            LL    G +F + LE + +      V +LK++    I +   +  L +G ++  S  G+ 
Sbjct: 272  LLGDMAGHLFMLFLEQEKKPDGTLSVKDLKVELLGEISIPECITYLDNGVIYVGSRLGDS 331

Query: 353  ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
             L +        D   S    MET                        +L PI+DM + +
Sbjct: 332  QLIKLI---TKADENGSYCVPMET----------------------FTNLAPIVDMAVVD 366

Query: 413  LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
            L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +K      FD  +
Sbjct: 367  LERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGI-KGMWALKVG-GSHFDNTL 424

Query: 473  VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
            V+SF   T +L++ GE VEE    GF+    +     + +D  +Q+ P+ +R I  + + 
Sbjct: 425  VLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSVRLISYESKM 484

Query: 531  -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
             I+EW    KRTI  V  N  QV+ A +G +L Y E+    Q++      +  +VACLDI
Sbjct: 485  VISEWEPQNKRTISVVACNGTQVLCA-TGNDLFYIEIS-CNQIVSKGFVTLQHEVACLDI 542

Query: 590  ASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASV 646
            +  P     ++ +AVG + D ++RIL L   + +  ++L  + +   P S+L    + + 
Sbjct: 543  S--PLDGNEAKIVAVGLWTDISVRILILPNLEEINKELLGGEII---PRSILMTCFEGNT 597

Query: 647  GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
                        +L   L +G ++  ++   TG LSD +   LG +P  L +        
Sbjct: 598  ------------YLLCALGDGSMYYFILHKQTGILSDKKKVTLGTQPTVLRTFRSLSTTN 645

Query: 707  MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
            +   S RP + Y    + + + ++ + + +  S +++   + +     + + + TI+ + 
Sbjct: 646  VFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEI- 704

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
            +  +   +PL  +PRR   Q   +   +I               + +  E++G+    + 
Sbjct: 705  QKLHIRTVPLGESPRRIAYQESSQTFGVI-------------TMRVDVQESSGVSIVRHS 751

Query: 827  NMDQMENGDDENKYDPLSDEQYGYPKAE--SDKWVSCIRVLDPRSANTTCLLELQDNEAA 884
               Q  +    +      ++  G+  +E   +  V  + ++D  +        L   E A
Sbjct: 752  ASTQATSTSSSSHIA-SHNKPSGHTASEIGQEIEVHNLLIIDQHTFEVLHAHTLMATEYA 810

Query: 885  FSICTVNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
             S+ +     ++  +   VGTA     +  PK     G I +Y +  EGK  ++  K ++
Sbjct: 811  LSLISTRL-GEDPTSYFVVGTAFINPDETEPK----MGRILLYHW-SEGKFTQVAEK-EI 863

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGD 1001
            +G   +L +F G+LLA I   +RL++   ++ LR  E   F N I + + T  D + VGD
Sbjct: 864  KGSCYSLVEFNGKLLASINSTVRLFEWTAEKELR-LECSHFNNIIALYLKTKGDFVLVGD 922

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +  S    +Y+  E      A D  P W+T+   +D DT  GA+   N++  +     + 
Sbjct: 923  LMRSLTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFVCQKDSAATS 982

Query: 1062 EIE 1064
            E E
Sbjct: 983  EDE 985


>gi|440301552|gb|ELP93938.1| CPSF A subunit region protein, putative, partial [Entamoeba invadens
            IP1]
          Length = 538

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/578 (24%), Positives = 250/578 (43%), Gaps = 95/578 (16%)

Query: 658  LFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLG 717
            LFL  G  +GV +   +     +  D   + +G     L  V V G   ++  S+     
Sbjct: 27   LFLGIGTTDGVCYGFRIK--GSEAEDLWVKTVGSEEVNLSEVEVFGTKGIVVSSTTMLFV 84

Query: 718  YIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLR 777
            Y +  R   TP+SY+ +   ASF +D   + +  +   ++ V + E L + F     PL 
Sbjct: 85   YSYLSRMEFTPISYQPIRAVASFVTDFAGDSLAGITDESMVVISFESLEDKFTTMDQPLL 144

Query: 778  YTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDE 837
            +TPR+ +   +    VI                          G+N       + NG++ 
Sbjct: 145  FTPRKVIKTMEFPTTVI-------------------------CGDNRCKVYTPLLNGENN 179

Query: 838  NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEH 897
            +      + + G    E   W S + +++    N++        E A  +C  +   K  
Sbjct: 180  D----FEERKIGVNLEEDGVWGSEVGIIEHTGYNSSI-----KTEGAI-VCGAHVFFKT- 228

Query: 898  GTLLAVGTAKGLQFWPKRNIVAGYIHIYR--------FVEEGKSLELLHKTQVEGIPLAL 949
                            KR  V   +H Y+         V    +   +HKT VE +  AL
Sbjct: 229  ---------------TKRCFVCSLVHDYKENTGECWIVVYNAINFNQIHKTPVESVCRAL 273

Query: 950  CQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFC 1009
            C F+G+LLAGIG  LR+YDLGK+ L+R+CE    P+ I  IN   ++I +  +   F + 
Sbjct: 274  CAFEGKLLAGIGTTLRMYDLGKQILIRRCEVGGIPSDINGINVSNNKIVLSTVASGFVYV 333

Query: 1010 KYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTG 1069
             Y  + N L +   D V   LT++  +D  T  G DK+G+++                  
Sbjct: 334  DYDVEANILKVVDQDKVWHSLTSSTILDEQTTIGFDKYGSLFIT---------------- 377

Query: 1070 GKIKWEQGKLN-GAPNKMEEIVQFHVGDVVTSLQKASLVPG----------------GGE 1112
             +I WE G    G  ++++E+VQ++VGDVVTS+    +  G                  +
Sbjct: 378  -EIDWELGNDEVGFLDRVKEVVQWYVGDVVTSVSVNEIWKGNLPEDEPTTAEEVLRQNKK 436

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVID 1172
             ++Y  +MG +G ++  + +++ +FF +LE  +++   PL       YR + +P   VID
Sbjct: 437  VIVYSCLMGRIGVLVPLNFKNEAEFFVNLETSIKKNFNPLLSNSFDMYRGSCYPSFGVID 496

Query: 1173 GDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
            GDLC+ +  +  +LQ++IAD +  TP ++  K ++ ++
Sbjct: 497  GDLCDFYNQMDGNLQQQIADVIGLTPVDVKVKCDDFKH 534


>gi|166240328|ref|XP_637896.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
 gi|238064940|sp|B0M0P5.1|DDB1_DICDI RecName: Full=DNA damage-binding protein 1; AltName: Full=DNA repair
            protein E; AltName: Full=UV-damaged DNA-binding protein 1
 gi|165988543|gb|EAL64385.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
          Length = 1181

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 278/1319 (21%), Positives = 522/1319 (39%), Gaps = 246/1319 (18%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MY +  T+Q+PT +  ++ GNF+G     +++++   +E+   +  G ++ +    I+G 
Sbjct: 1    MYNFVSTVQKPTSVTHSVTGNFTGPNDKNLIISKCTKIEIFLMDQDG-LKPMFDVNIYGR 59

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN-PSKNVFDKIH---QETFGKSGCRRIVP 116
            I  L  F + GS++DY+ + ++S +  IL Y+   K +  K     ++T G    R    
Sbjct: 60   ISVLKLFSVAGSKQDYLFISTESFKFCILAYDYEKKEIITKASGNAEDTIG----RPTEA 115

Query: 117  GQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTIS---------------------- 154
            GQ   +DP GR V +   E    +  L+ +       +                      
Sbjct: 116  GQLGIIDPDGRIVALHLYEGLLKLITLDNNNTPNKINNNNNNNNNNNNNNNNNNNNNINN 175

Query: 155  -----------SPLEAHKSHTIVYSICGIDCGF----DNPIFAAIELDYSEADQDSTGQA 199
                       SP++ + ++  +  +  +D  F      P  A +  D  +    ST + 
Sbjct: 176  NNFNINNNNNNSPIQKNVNNVRLEELQVLDMTFLYGCKVPTIAVLFKDTKDEKHISTYEI 235

Query: 200  ASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTVPGGGDGPSGVLVCAENFVIYK 258
            +S+        EL +G       WS+  V   +++LV VP GG     VLV A+N + Y 
Sbjct: 236  SSKDT------ELVVG------PWSQSNVGVYSSLLVPVPLGG-----VLVVADNGITYL 278

Query: 259  NQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHV 318
            N         + R   +   + +    A T   K    FL    +G +  + L H  + V
Sbjct: 279  N-------GKVTRSVAVSYTKFL----AFTRVDKDGSRFLFGDHFGRLSVLVLIHQQQKV 327

Query: 319  SELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEE 378
             ELK +    I + +S+  L SG ++  S  G+      Q I  + + + ++ + +   E
Sbjct: 328  MELKFEQLGRISIPSSISYLDSGVVYIGSSSGDS-----QLIRLNTEKDQTTDSYVTYLE 382

Query: 379  GFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRP 438
             F                    ++ P++D  + +  ++   QI T  G     SLRI+R 
Sbjct: 383  AFT-------------------NIGPVVDFCVVDAEKQGQAQIVTCSGTYRDGSLRIIRN 423

Query: 439  GLAVSEMAVSQLPGVP--------------------SAVWTVKKNVNDEFDAYIVVSFNN 478
            G+ ++E A  +L G+                     +        + D  D Y++ SF  
Sbjct: 424  GIGIAEQASIELEGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITDSKDRYLITSFIE 483

Query: 479  ATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGD-DSLMQVHPSGIRHIREDG--RINEW 534
             T VLS  GE +EE    G      +L    I   + L+Q+    I  I  +   R+++W
Sbjct: 484  CTKVLSFQGEEIEETEFEGLESNCSTLYCGTIDKLNLLIQITNVSINLIDSNTFKRVSQW 543

Query: 535  RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-EMSGDVACLDIASVP 593
                 R I  V +N+ Q+V+++    L+YF+++ + + +++ K  E+  +++C+DI+   
Sbjct: 544  NVEPSRRINLVSTNQDQIVLSIDKS-LLYFQINSSNKSIQLVKEIELPHEISCIDISPFD 602

Query: 594  EGR-KRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
                 +S+ ++VG + D T+RI  L         +++ +   P     L     +   D 
Sbjct: 603  SFMDTKSQLVSVGLWNDITLRIFKLP--------TLEEIWKEPLGGEILPRSILMISFDS 654

Query: 652  ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
             D     ++   L +G LF+   D  + +L D R   LG +P  L    +     +  +S
Sbjct: 655  ID-----YIFCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKFKLKNTINIFAIS 709

Query: 712  SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
             RP + Y H  +   + ++ + +    SF+SD     +     N+L + TI+ + +   +
Sbjct: 710  DRPTVIYSHNKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTIGTIDEIQKLHIK 769

Query: 772  TALPLRYTPRRFVLQPKKK---LMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
            T +PL     R ++  +      ++ ++ ++G L       A+  C              
Sbjct: 770  T-IPLNEEMGRRIVHLEDHSCYAVITVKNNEGLLG-----GAQDLC-------------- 809

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
                                     E D+ VS IR+ + ++       +L   E  +SI 
Sbjct: 810  -------------------------EEDEEVSYIRIYNDQTFELISSYKLDPYEMGWSIT 844

Query: 889  TVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV-----------------EEG 931
               F   +  T LAVGT+          ++   +                         G
Sbjct: 845  PCKFAGDDVNTYLAVGTSINTPIKSSGRVLLFSLSSSSSSNDKDSLDNNNNNNNNSGANG 904

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL----GKKRLLRKCENKLF---P 984
            K L LL + +       L  F GRL+A +    RL+ +     K++  +   ++      
Sbjct: 905  K-LTLLEEIKFRSSVYFLLSFNGRLIAAVHK--RLFSIRYTHSKEKNCKVISSESVHKGH 961

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
              I+ + +    I VGD+ +S      + D   L   A +  P W+ +   I+ D   GA
Sbjct: 962  TMILKLASRGHFILVGDMMKSMSLLVEQSD-GSLEQIARNPQPIWIRSVAMINDDYFIGA 1020

Query: 1045 DKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKA 1104
            +   N   V+   D ++E+E +                   ++ +  +H+G+ + S++  
Sbjct: 1021 EASNNFIVVKKNNDSTNELEREL------------------LDSVGHYHIGESINSMRHG 1062

Query: 1105 SLV--PGGGE----SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHM 1158
            SLV  P   +    +++Y +V GS+G + + S  D + FFS L+  + Q    + G  H 
Sbjct: 1063 SLVRLPDSDQPIIPTILYASVNGSIGVVASISEEDFI-FFSKLQKGLNQVVRGVGGFSHE 1121

Query: 1159 AYRS-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             +R+          K+ IDGDL E F  L  + Q K   +L  TP +  +++E +   I
Sbjct: 1122 TWRAFSNDHHTIDSKNFIDGDLIETFLDLKYESQLKAVADLGITPDDAFRRIESLMQYI 1180


>gi|110741229|dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana]
          Length = 727

 Score =  182 bits (463), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 200/821 (24%), Positives = 349/821 (42%), Gaps = 134/821 (16%)

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            Q+ T  G     SLR++R G+ ++E A  +L G+   +W++K ++++ FD ++VVSF + 
Sbjct: 5    QVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIK-GMWSLKSSIDEAFDTFLVVSFISE 63

Query: 480  T--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWR 535
            T  L +++ + +EE    GFL    +L       + L+QV  + +R +    R   +EW 
Sbjct: 64   TRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEWH 123

Query: 536  TPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEG 595
             P   T+    +N  QV++A  GG L+Y E+   G+L EV+   +  +V+CLDI  + + 
Sbjct: 124  APAGFTVNVATANASQVLLATGGGHLVYLEIG-DGKLTEVQHALLEYEVSCLDINPIGDN 182

Query: 596  RKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
               S+  AVG + D ++RI SL                 PE  L L  +  +GGE     
Sbjct: 183  PNYSQLAAVGMWTDISVRIFSL-----------------PE--LTLITKEQLGGEI---I 220

Query: 655  PASLFLNA---------GLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
            P S+ L A          L +G L    +D  TGQL D +   LG +P  L +       
Sbjct: 221  PRSVLLCAFEGISYLLCALGDGHLLNFQMDTTTGQLKDRKKVSLGTQPITLRTFSSKSAT 280

Query: 706  AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
             +   S RP + Y    + L + ++ + + +   F+S    + +       L + TI+ +
Sbjct: 281  HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDI 340

Query: 766  GETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGN 825
             +  +   +PL    RR   Q + +                        F    +G   N
Sbjct: 341  -QKLHIRTIPLGEHARRICHQEQTR-----------------------TFGICSLGNQSN 376

Query: 826  GNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
                +M                              +R+LD ++        L   E   
Sbjct: 377  SEESEMH----------------------------FVRLLDDQTFEFMSTYPLDSFEYGC 408

Query: 886  SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNI-VAGYIHIYRFVEEGKSLELLHKTQVEG 944
            SI + +F + ++     VGTA  L   P+ N    G I ++  VE+G+ L+L+ + + +G
Sbjct: 409  SILSCSFTEDKN-VYYCVGTAYVL---PEENEPTKGRILVF-IVEDGR-LQLIAEKETKG 462

Query: 945  IPLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
               +L  F G+LLA I   ++LY     D G + L  +C +      +  + T  D I V
Sbjct: 463  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVV 521

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD+ +S     Y+ +E  +   A D    W++A   +D D   GA+   N+  V+     
Sbjct: 522  GDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVK----- 576

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP-------GGGE 1112
                         K  +G  +    ++E + ++H+G+ V   +  SLV        G   
Sbjct: 577  -------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQIP 623

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPV 1167
            +VI+GTV G +G ++A   ++   F   L+  +R+    + G  H  +RS          
Sbjct: 624  TVIFGTVNGVIG-VIASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 682

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            ++ +DGDL E F  LS +    I+  ++    E+ K++EE+
Sbjct: 683  RNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEEL 723


>gi|328770638|gb|EGF80679.1| hypothetical protein BATDEDRAFT_11194 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1098

 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 282/1226 (23%), Positives = 496/1226 (40%), Gaps = 193/1226 (15%)

Query: 3    LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL---LRPENSGRIETLVSTEIFG 59
            LY +T  +P  + +AI  NF+      ++V             P     +  +    I+G
Sbjct: 2    LYHVTAHKPDSVSSAIRANFTSASDINLIVRMTDEFSTNIDSNPTVRKSLRLITDVPIYG 61

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             I  +  FR      D I V ++ G +++L ++             F     R   PGQ 
Sbjct: 62   RIACIHAFRPEHRDTDLIFVSTERGSVIVLSFDQQTQRLVPEATGDFNDPSSRLADPGQI 121

Query: 120  LAVDPKGRAVMIGACEKQ---KLVYVLNRDTAARLTISS-PLEAHKSHTIVYSICGIDCG 175
              VDP+ R  MIG    Q   K++ + +    +++++SS  L  + S     SI G    
Sbjct: 122  GLVDPQNR--MIGLHIHQGNFKIIPMFH----SQISLSSWNLLVNSSQ----SIKGKGVA 171

Query: 176  FD-NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANML 234
               +P  A + +D  E+   +        Q  +   E  L L   + K    V+NG+++L
Sbjct: 172  RPPHPTLAVLHMDSKESRYVT--------QYEVVIKEKALVLKSAATK----VENGSSLL 219

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            + VP       GVLV  E  +   +   P ++  I     + + +  LI     ++    
Sbjct: 220  IPVPLAA---GGVLVVGEQSIALHS---PSLQKPI-----MLSIKATLI--KCFNQVDVG 266

Query: 295  FFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
            F +LL    G ++ + +   N    ELK+         +S+  L  GYLF AS FG+  L
Sbjct: 267  FRYLLGDYEGQLYILAIIFANGTARELKMTPVGQTVQASSLTYLTDGYLFVASHFGDSEL 326

Query: 355  YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
            Y        P+ +A++  ++   + F                    +L PI D  + ++ 
Sbjct: 327  YLIV-----PE-DANTGNVLTLCKTF-------------------SNLAPISDFCVVDIE 361

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP--SAVWTVKKNVNDEFDAYI 472
            ++   QI    G     S+RI+R G+ V E  + QL  +   + VW +K       D  +
Sbjct: 362  KQGQAQIVACSGAQRDGSIRIIRNGIGVEE--IGQLDDMEELTGVWALKPYSAARHDNVL 419

Query: 473  VVSFNNATLVLSI-GETVEEVSDSGFLDTTP-SLAVSLIGDDSLMQVHPSGIRHIREDG- 529
            V+SF   T +  + G+++ E+   G   T   +L    +  D ++Q+    I  +  +G 
Sbjct: 420  VLSFIGETRLQKLDGDSMAEMDMLGNFKTAERTLWCQNLSSDMVVQITSQSITILTIEGW 479

Query: 530  -RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
              + EW      ++      +  ++++L GG +  FE +   +L+     ++  +V+CL 
Sbjct: 480  TTVAEWCFDLGASVTHASVYQNMILVSLGGGMIHLFEFN-DRELVMKRSIQIQVEVSCLH 538

Query: 589  IASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
            I  + E        AVG + DN++R+L + PD       +    + P S+L +E      
Sbjct: 539  ICKMEE--LNVCLCAVGCWEDNSVRLLKI-PDLSEIQKEILPGDTIPRSILLVEF----- 590

Query: 648  GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM 707
                 D+   L ++ G  +G LF   +   + +L+D +   L  +P  L +    GR  +
Sbjct: 591  -----DNLPYLLVSLG--DGQLFNFRIGK-SLKLADRKKITLATQPITLRTFQSHGRTHV 642

Query: 708  LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGN-ALRVFTIERLG 766
               S RP + ++  G+ L + ++   + + + F+S    EG ++ A + AL++ TIE + 
Sbjct: 643  FAASDRPTVIFVKSGQLLYSNVNVREISHVSPFNS-HMAEGALAFASDGALKIGTIETVQ 701

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
            +   +T + L  TPRR            +    G LT   R                   
Sbjct: 702  KLHIKT-IKLGETPRRIAYHD-------VSHTFGVLTVFSR------------------- 734

Query: 827  NMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFS 886
                + NGD       L+D             +SC+R+LD +       +ELQ  E A S
Sbjct: 735  ---NLPNGD-------LAD-------------ISCLRLLDGQGYEVLDSIELQPFEIASS 771

Query: 887  ICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIP 946
            + T+ F D +      VGT  G  F  +   V G I +++ V + + L+L+H+  + G  
Sbjct: 772  LITIRFTDDD-TLYYTVGT--GFAFPHEDEPVRGRILVFK-VNDMRLLQLVHEYDIRGSA 827

Query: 947  LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGDIQES 1005
             +     GRL+AG+   + +        L + ++    + + +S+    D I V D+ +S
Sbjct: 828  YSFVSVHGRLVAGVNSNVMVLRWNSDTSLLELQSMNHGHVLALSLAVRGDFILVADLIKS 887

Query: 1006 FHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE 1065
                ++    + L   A D+   W+TAA  ID DT  GAD   NI+ +    D   E E 
Sbjct: 888  ITLLQFDLATDSLKELAYDADSNWMTAAELIDDDTFLGADSSMNIFALSKQGDQVSEEER 947

Query: 1066 D---PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE---------S 1113
                P G    W                 FH G+++   +K SL     +          
Sbjct: 948  QRLRPKG----W-----------------FHTGELINRFRKGSLTLHATDETLALPAIPE 986

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR---QEHPPLCGRDHMAYRSAYFPVKD- 1169
            ++Y TV G++G +    S +     S L+  ++   Q    L   D   YR+    +K  
Sbjct: 987  ILYCTVHGAIGVVARIPSDETAKILSTLQEALKSVVQGVGGLIHSDWRRYRTERRSIKSA 1046

Query: 1170 -VIDGDLCEQFPTLSLDLQRKIADEL 1194
             +IDGDL E F    L+L R + D +
Sbjct: 1047 GIIDGDLIESF----LELDRSMQDHV 1068


>gi|297284768|ref|XP_001117238.2| PREDICTED: splicing factor 3B subunit 3-like, partial [Macaca
           mulatta]
          Length = 110

 Score =  178 bits (452), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/108 (78%), Positives = 97/108 (89%), Gaps = 1/108 (0%)

Query: 25  TKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDS 83
           TK  EIVV+RGK+LELLRP+ N+G++ TL++ E+FG IRSL  FRLTG  KDYIVVGSDS
Sbjct: 1   TKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGGTKDYIVVGSDS 60

Query: 84  GRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMI 131
           GRIVILEY PSKN+F+KIHQETFGKSGCRRIVPGQ+LAVDPKGRAVMI
Sbjct: 61  GRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMI 108


>gi|41055225|ref|NP_956920.1| DNA damage-binding protein 1 [Danio rerio]
 gi|34784892|gb|AAH56837.1| Zgc:63840 [Danio rerio]
          Length = 897

 Score =  174 bits (440), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 224/994 (22%), Positives = 405/994 (40%), Gaps = 131/994 (13%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
           Y Y +T Q+PT + A I G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3   YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYAVTAEG-LRPVKEVGMYGKI 61

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIV 115
             +  FR  G  KD + + +      ILEY  S +  D I       Q+  G+     I+
Sbjct: 62  AVMELFRPKGESKDLLFILTAKYNACILEYKQSGDSIDIITRAHGNVQDRIGRPSETGII 121

Query: 116 PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
                 VDP+ R + +   +    V  L+R+       +  LE  +   + +       G
Sbjct: 122 G----IVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVQFLY-----G 172

Query: 176 FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANML 234
              P    I        QD  G+     + +L   E + G       W  E V+  A+M+
Sbjct: 173 CQAPTVCFIY-------QDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMV 219

Query: 235 VTVPGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVS 285
           + VP   +   G ++  +  + Y N         P ++    V   R D    R +L   
Sbjct: 220 IPVP---EPFGGAIIIGQESITYHNGDKYLAVAPPIIKQSTIVCHNRVDPNGSRYLL--- 273

Query: 286 AATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
                +  LF  LL+ E      V L+       +L ++      +   +  L +G +F 
Sbjct: 274 --GDMEGRLFMLLLEKEELMDGAVVLK-------DLHVELLGETSIAECLTYLDNGVVFV 324

Query: 346 ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            S  G+  L +   +  D + + S   +MET                        +L PI
Sbjct: 325 GSRLGDSQLVK---LNVDSNDQGSYVGVMET----------------------FTNLGPI 359

Query: 406 MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
           +DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++   +
Sbjct: 360 VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSESS 418

Query: 466 DEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
            + D  +V+SF   T VL + GE VEE    GF+D   +     +    L+Q+    +R 
Sbjct: 419 RDTDDMLVLSFVGQTRVLMLSGEEVEETELQGFVDNQQTFFCGNVAHQQLIQITSVSVRL 478

Query: 525 IREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
           + +D +  ++EW+ P  R I     N  QVV+A+  G ++Y+   ++G+L ++   EM  
Sbjct: 479 VTQDSKALVSEWKEPQGRNISVASCNNTQVVLAV--GRVLYYLQILSGELKQISSTEMEH 536

Query: 583 DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLF 639
           +VACLDI  + E    S   AVG + D + R+L L    C   L  + +     P S+L 
Sbjct: 537 EVACLDITPLGERTADSCICAVGLWTDISARLLKL---PCFTPLHKEMLGGEIIPRSILM 593

Query: 640 LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
              + S        H    +L   L +G LF   +D+ TG LS+ +   LG +P  L + 
Sbjct: 594 TTFEGS--------H----YLLCALGDGALFYFGLDIQTGVLSERKKVTLGTQPTVLRTF 641

Query: 700 VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
                + +   S RP + Y    + + + ++ + + Y    +S+   + +     + L +
Sbjct: 642 RSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTI 701

Query: 760 FTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKEC 814
            TI+ + +  +   +PL  +P+R   Q   +   ++ +     D    TA  R +A  + 
Sbjct: 702 GTIDEI-QKLHIRTVPLYESPKRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSASTQ- 759

Query: 815 FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
              A      +  +        E  +               +  V  + V+D  +     
Sbjct: 760 ---ALSSSVSSSKLLPSSTSPHETSFG-------------EEVEVHSLLVVDQHTFEVLH 803

Query: 875 LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
             +   NE A S+ +     ++      VGTA  + +  +     G I ++ +  +GK L
Sbjct: 804 AHQFLQNEYALSMVSCKL-GRDPAVYFIVGTA--MVYPEEAEPKQGRIIVFHYT-DGK-L 858

Query: 935 ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYD 968
           + + + +V+G   ++ +F G+LLA I   +RLY+
Sbjct: 859 QTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYE 892


>gi|256079468|ref|XP_002576009.1| sam/hd domain protein [Schistosoma mansoni]
          Length = 692

 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 83/146 (56%), Positives = 106/146 (72%), Gaps = 2/146 (1%)

Query: 318 VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETE 377
           V+E+K+KYFDT+PV ++MCVLK+G+LF ASEFGNH LYQ   +G D D E   S+ M  E
Sbjct: 2   VTEIKLKYFDTVPVASAMCVLKTGFLFVASEFGNHCLYQIAHLGDDDD-EPEFSSAMPLE 60

Query: 378 EGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILR 437
           EG    +F PR LKNL+ ++ +ESL P+M   IA+   E+ PQ+  LCGRGP S+ R+LR
Sbjct: 61  EG-DTFYFAPRPLKNLIEVDVMESLSPVMSCHIADFANEDTPQLAALCGRGPGSTFRLLR 119

Query: 438 PGLAVSEMAVSQLPGVPSAVWTVKKN 463
            GL VSEMA S LPG P+AVWTVK+N
Sbjct: 120 HGLEVSEMAKSDLPGNPNAVWTVKRN 145


>gi|412992547|emb|CCO18527.1| predicted protein [Bathycoccus prasinos]
          Length = 1275

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 213/960 (22%), Positives = 401/960 (41%), Gaps = 141/960 (14%)

Query: 297  FLLQTEYGDIFKVTLEHDNEH------VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
            FL+  E GD++ + L            VS+L I+        ++M  L +  +F  S +G
Sbjct: 404  FLIADEDGDLYLLMLSKGTTSTMSTSIVSKLTIERLGKTSSASAMSYLDNSVVFIGSAYG 463

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI 410
            +  + +      +  + AS+           P + +         +E+  +L PI+D  +
Sbjct: 464  DSQIIKLHTEQVNTMMSASNEL---------PSYVEV--------LEEFTNLGPIVDFCV 506

Query: 411  ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA 470
             +L      Q+ T  G G   SLR++R G+ + E A   L G+   +++ K++     D+
Sbjct: 507  MDLERHGQGQLVTCSGVGTSGSLRVIRNGIGIREQAQISLSGIK-GLYSCKRDETMPLDS 565

Query: 471  YIVVSFNNATLVLSIGET--VEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            Y++VSF   T +L+I +   +EE    GF  ++ ++  + I  + + QV   G+      
Sbjct: 566  YLIVSFIAETRILAINDNDELEEAVFPGFDASSQTIECANISGNVICQVTSKGVYVCDAS 625

Query: 529  G--RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVAC 586
                +  W    +  I    ++   + +A  GG L Y      G++ E  K     +++C
Sbjct: 626  SGELVASWVPSDESPITASSASENTIAVATVGGNLHYLSF-QGGKISETGKMTFDAEISC 684

Query: 587  LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQA 644
            +D     +        AVG +  + ++L ++    M++   +++S    P S LF   + 
Sbjct: 685  IDKTQCGD----RNVCAVGLW--STKVLLVELGSGMKVCHTENLSLDVVPRSTLFCFFED 738

Query: 645  SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTG----QLSDSRSRFLGLRPPKLFSVV 700
            ++            +L  GL +G L   VVD  +      LSD +S  LG +P  L    
Sbjct: 739  TI------------YLLTGLGDGHLITNVVDSSSSAGGFALSDRKSVSLGTQPVTLKLFK 786

Query: 701  VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVF 760
                  +   S RP + Y +  + + + ++   + + A F+ D   + +   +G  L + 
Sbjct: 787  SQHSMHVFAGSDRPTIIYSNSKKLVYSNVNLNEVLHVAPFNCDAFPDALALASGEHLTIG 846

Query: 761  TIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEERE----AAKKECFE 816
             ++ + +  +   +PLR  PRR   QP+ K + ++   +  +  +E E        + FE
Sbjct: 847  AVDDI-QKLHIRTVPLREQPRRIAHQPETKTLAVLTMKESDVPGQEEEFFVRLFDNKTFE 905

Query: 817  AAGM-----GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN 871
                      EN    +    +GDD+  +  +    +  P +E +   S  R+L  + +N
Sbjct: 906  TLAKYPLEPNENDASIISCSFDGDDDIYF--VVGTAFADPHSEPES--SRGRILVFKVSN 961

Query: 872  TTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEG 931
            T+         +      VN +D  HG   A  ++  LQ                     
Sbjct: 962  TS--------SSGGGNAVVNGND--HGDGRASASSSVLQ--------------------- 990

Query: 932  KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLG-----KKRLLRKCENKLFPNT 986
            KSL L+ + +  G    L  F G+LLAGI  +++L++ G     K+ L+ +C + +    
Sbjct: 991  KSLTLVCEKETRGAVYNLNAFCGKLLAGINSLVKLFNWGVSKENKRELVHECSH-MGHII 1049

Query: 987  IVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADK 1046
             + + T  + I VGD+ +S    +Y+R+  ++   A D    W+TA   +D +T  GA+ 
Sbjct: 1050 ALKVETKDNLIVVGDLMKSITLLQYQRESGRIEEVAHDFSSNWMTAVEILDDNTYLGAES 1109

Query: 1047 FGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL 1106
              N++ V   Q  +D   ED  G                +E    FH+GD V   ++ SL
Sbjct: 1110 SYNLFTV---QRNADADTEDKRG---------------TLELCGAFHLGDSVNRFRRGSL 1151

Query: 1107 V---PGGGESV---------IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCG 1154
            V   P   +           ++GT+ G LG +     RD +   + ++  M++    +  
Sbjct: 1152 VMRMPDLSDDTSSLSEISTWLFGTISGGLGVVATLPKRDFM-LLNKVQEAMQKVVTGVGN 1210

Query: 1155 RDHMAYRSAY-----FPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGE-ILKKLEEI 1208
              H  +RS +       +++ IDGDL E F  LS + Q  +++    +  E ++KK+EEI
Sbjct: 1211 FSHSDFRSFHNVQRSVEMRNFIDGDLVEIFLDLSKEDQVAVSELSGVSNSEDLVKKIEEI 1270


>gi|356467155|gb|AET09709.1| splicing factor 3B subunit 3 [Trichinella pseudospiralis]
          Length = 129

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 99/125 (79%)

Query: 1087 EEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR 1146
            E I  ++VG+ VT LQKA L+PG  ES++Y T+ G +GA++ FSS++D +FF HLEMH+R
Sbjct: 2    ETIATYYVGECVTCLQKAMLIPGSSESLVYSTMSGMIGALVPFSSKEDYEFFQHLEMHLR 61

Query: 1147 QEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLE 1206
             E+PPLCGRDH+AYRS Y PVK VIDGDLCEQ+  L    Q++I++ELDR P EI+KKLE
Sbjct: 62   TEYPPLCGRDHLAYRSFYAPVKGVIDGDLCEQYCLLEYAKQKEISNELDRVPSEIMKKLE 121

Query: 1207 EIRNK 1211
            +IRN+
Sbjct: 122  DIRNR 126


>gi|290998415|ref|XP_002681776.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
 gi|284095401|gb|EFC49032.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
          Length = 1103

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 277/1260 (21%), Positives = 514/1260 (40%), Gaps = 225/1260 (17%)

Query: 10   QPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRL 69
            +PT I  + +GNF+      +++ + + L++ R    G + ++V  E  G I +++ FR 
Sbjct: 11   KPTTIGCSASGNFTSPSDINLIMCKNQYLQVNRLSEEG-VSSVVEFEAPGRIDTMSLFRP 69

Query: 70   TGSQKD---------YIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            +G ++D         +  +G   G+I  L    S ++ D +          RR   G   
Sbjct: 70   SGEKQDLLFITIEDTFFTLGFIDGKIETL---SSGSIDDPVG---------RRSESGSIT 117

Query: 121  AVDPKGRAVMIGACEKQ-KLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
             +DP  RAV +   E   K++   N     +   +  LE      I +           P
Sbjct: 118  TIDPLCRAVALSIYEGLLKIIPFENNKHQFKEAFNVRLEELNVIDIAFLESLGSKSKSGP 177

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPG 239
             FA +  D+            S   K      LD  +   S      VD+GAN+L+ VP 
Sbjct: 178  TFALLYQDH----------VGSRHVKTYEVKTLDKDMEESSLNQLN-VDHGANILIPVPA 226

Query: 240  GGDGPSGVLVC-AENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
                P G ++C  E  V Y N+ + +     P  + +        + +      T +F  
Sbjct: 227  ----PLGGVICVGEAQVSYINESNKNHSVASPANSRMA-------IRSYGKLDNTRWF-- 273

Query: 299  LQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ 358
            L  + G ++ ++L+  +  V+ L +K      +++ +  L +GY+F  S +G+      Q
Sbjct: 274  LGDQSGQLYLLSLQVSDSEVTGLTLKELGVTSISSCISYLDNGYVFIGSNYGDS-----Q 328

Query: 359  AIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEA 418
             I    ++   +++  E  + +                    ++ PI+D    +  ++  
Sbjct: 329  VIRISDELNPETNSYFEVFQTYS-------------------NIGPIVDFCFVDADKQGQ 369

Query: 419  PQIFTLCGRGPRSSLRILRPGLAVSEMA-VSQLPGVPSAVWTVKKNVNDEFDAYIVVSFN 477
             QI T  G     SLRI++ G+ + E+  +S L G+ + +W++K    +E   Y+V+SF 
Sbjct: 370  GQIVTCSGAFKDGSLRIIKNGIGIEELTTISDLVGL-NRIWSLKTETGEE--KYLVMSFT 426

Query: 478  NATLVLSI-GETVEEVSDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INE 533
              TL+ S+  E + E    GF +D+T  L  ++IG++ L QV     R +       I+E
Sbjct: 427  GQTLISSVDNEEIGEAKIPGFDVDSTTVLCDTVIGNNYL-QVTDKTARLVSSHTLELIDE 485

Query: 534  WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVP 593
            W+ P   TI    SN  Q+V++L  G+L+Y E+     L ++++ ++  +V+C+DI S  
Sbjct: 486  WK-PSSGTISLAASNPTQLVVSLGEGKLVYIEISAQS-LKQIQQTKLDYEVSCIDI-SPE 542

Query: 594  EGRKRSRFLAVGSYDN-TIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGED 650
            EG+  S   AVG +   ++R+L+L   D   IL+VQ +     P S+L    +       
Sbjct: 543  EGKISSTVCAVGMWTEISVRVLTLPSFD---ILTVQELGGEILPRSILMPTFE------- 592

Query: 651  GADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA-AMLC 709
            G +     +L  GL +G LF   +D   G L+D +    G +P  L   +   R   +  
Sbjct: 593  GIN-----YLMCGLGDGHLFTFKMDRGMGILTDKKRIVAGSKPIMLRPFISKDRQLNVFA 647

Query: 710  LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
             S RP + Y    + + + ++   +    SF+ +     +     N++ +  I+ + +  
Sbjct: 648  ASERPTIIYSRNQKLVYSNVNLGEVNDMCSFNHESFPFHIAIANENSILIGQIDEIQKLH 707

Query: 770  NETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
             +T + L   P +   QP  K   ++ T                                
Sbjct: 708  IKT-VQLHAQPTKICHQPSTKAYGLLIT-------------------------------- 734

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
            Q EN +                        S I  LD  +      + L+ NE   SI +
Sbjct: 735  QFENPE-----------------------TSAIFSLDENNFEKKSEIRLEGNELGQSIIS 771

Query: 890  VNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
              F D ++   + VGTA  +G +  P +    G I + + V++ K L L  +  V+G  +
Sbjct: 772  CKFTDDDNEYFI-VGTAITEGDEEEPSK----GRILVLQ-VQDDK-LVLKAEKDVKGAVM 824

Query: 948  ALCQFQGRLLAGIGPVLRLY------DLGKKRLLRK--CENKLFPNTIVSINTYRDRIYV 999
             L  F G+LLAG+   L L+      D   K L+++  C   ++   I+ I+++ D I +
Sbjct: 825  VLHSFNGKLLAGVSGRLMLFKWAESDDGDNKDLVQECSCSGGIY---ILDIDSHGDFILI 881

Query: 1000 GDIQESFHFCKYRRDENQ-----LYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            GD+ +S H   Y   E Q     L + + D    WL+ +  ++       D+ GN+  ++
Sbjct: 882  GDMMKSVHLFVYENPEEQHVSGNLRLISKDYQYSWLSCSLMLNESEYVAVDQQGNMITLK 941

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQ-----------K 1103
               + + E E                    ++  + +++  D V  +Q            
Sbjct: 942  KNDEAASEEER------------------KQLVRVGKYYCSDRVNRIQPGFIGMRFANSS 983

Query: 1104 ASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCG---RDHMAY 1160
            + +     ++ ++GT+ G +G +LA    +   F + ++  M      L       +  Y
Sbjct: 984  SDINTQPVKTALFGTISGGIG-VLAQLPPETFAFVTKIQKAMSSVVTGLANISRETYRQY 1042

Query: 1161 RSAYFPVKDV--IDGDLCEQFPTLSLDLQRKIADELDR------TPGEILKKLEEIRNKI 1212
            RS       V  IDGD  E F     + Q+++ +EL        T  E++K +E++ + I
Sbjct: 1043 RSERTREDSVGFIDGDFVESFLEFDFETQQRVIEELSNNHQEQITLEELVKNIEDLSHLI 1102


>gi|298711490|emb|CBJ26578.1| n/a [Ectocarpus siliculosus]
          Length = 1135

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 284/1264 (22%), Positives = 500/1264 (39%), Gaps = 231/1264 (18%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y  T ++ T +  ++  +F+G     +V+A+G  LE+ R   +  ++  +   ++GAI +
Sbjct: 5    YVATAKKATAVSKSLVCHFTGPDDLNLVIAKGAHLEI-RAITAEGLQHRLDVPLYGAIAT 63

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVD 123
            +  +RL     + I V ++  +  +L+Y+ S+         +      R I   +   +D
Sbjct: 64   MEAYRLADENCERIFVLTERYQFCVLQYDVSRQEIRTRSSGSVKDRIGRAIDNSKIGVMD 123

Query: 124  PKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAA 183
            P+ R  MIG    +    V+  D   +L  +  +   +   +         G      A 
Sbjct: 124  PQSR--MIGLHLYEGYFKVIPMDAKGQLKDAFNIRLEELEVLDIQFLS---GCPKATIAV 178

Query: 184  IELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE-PVDNGANMLVTVPGGGD 242
            +  D   A    T   ++  +      E D G       W++  V++ A+ L+ VP    
Sbjct: 179  LYQDQRNARHIKTYTISTRDK------EFDTG------PWAQLNVEHNASELIPVPA--- 223

Query: 243  GP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQT 301
             P  GVL+     + Y +         IP +       G   V A   R       L+  
Sbjct: 224  -PFGGVLILGHQTICYHS---GKAFITIPIQNTRMCAYG--WVDADGSR------LLVSD 271

Query: 302  EYGDIFKVTLEHD--NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
              G +  V L  D  N  V    I+        +S+  L +G +F  S  G+      Q 
Sbjct: 272  HSGGLHVVILTPDATNTAVETAHIEALGETSCASSISYLDNGVVFIGSASGDS-----QL 326

Query: 360  IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAP 419
            I  +P+ +A            Q  + Q         +E  ++L PI+DM +A+L  +   
Sbjct: 327  IKLNPEKDA------------QGTYIQV--------LETYDNLGPILDMCVADLDRQGQG 366

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA 479
            Q  T  G     SLRI+R G+ ++E A  +L G+   +W+++ + N   D Y+V +F + 
Sbjct: 367  QAVTCSGCSKDGSLRIIRNGIGINEHAAIELAGI-KGMWSLRPS-NTNHDKYLVQAFISE 424

Query: 480  TLVLSIGE------TVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG--RI 531
            T VL+  E       + E   +GF +   +L    +G +  +QV   G+  I  DG   I
Sbjct: 425  TRVLAFEEDEDGDHQLAEGEIAGFQEGC-TLFCGCVGGNMAVQVTKRGVVLICCDGLQEI 483

Query: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG-QLLEVEKHEMSGDVACLDI- 589
            + W  P    I     N  +VV+AL GG L++ EVD T  +L++  + ++  ++AC+ + 
Sbjct: 484  DRWDPPTDLNITVASGNATRVVLALGGGNLVHLEVDATAKKLVQKARVQLDNEIACISLN 543

Query: 590  ----------------ASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSS 632
                                E  K    +AVG + D T+R+LSL PD       +Q VSS
Sbjct: 544  PPSNQPVSNAEPATTAMECDEESKLDSLVAVGMWTDMTVRLLSL-PD-------LQGVSS 595

Query: 633  PPESLLFLEVQA-SVGGEDGADHPASLFLNAGLQNGVLFRTVVDMV---TGQLSDSRSRF 688
             P   L  + QA SV     AD     +L  GL +G +    +++    T  L   +   
Sbjct: 596  QP---LGGDTQARSVILATIAD---VHYLFVGLGDGHVVSFPLEVTAESTLALGTPKKVA 649

Query: 689  LGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEG 748
            LG +P  L      G   +   S RP + Y   G+ L   ++   +    SF S +    
Sbjct: 650  LGTQPVGLACFRNNGMVCVFVASDRPAVIYCSGGKLLYANVNMGEVNSVCSFDSSELPHC 709

Query: 749  VVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEERE 808
            +   + N+L + TI+ + +  +   + L   P+R       ++  II T   A+      
Sbjct: 710  LALASENSLTIGTIDDI-QKLHIQKVSLGEAPQRITHHDSGRMFGIITTSYRAV------ 762

Query: 809  AAKKECFEAAGMGENGNGNMDQMENGDDENKY-------DPLSDEQYGYPKAESDKWVSC 861
                                   EN D+E ++       D   +E Y +P          
Sbjct: 763  -----------------------ENSDEEEEHNFVKFLDDTNFEELYCHP---------- 789

Query: 862  IRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGY 921
                          L+  +N ++   C V  +DK+   ++  G  +  +  P      G 
Sbjct: 790  --------------LDAFENGSSMVSC-VFANDKKEYLVVGTGYVREDECEP----AVGR 830

Query: 922  IHIYRFVEEG--KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY-----DLGKKRL 974
            + ++    +G  + ++L  + +  G    L  F G+LLA I   ++L+     D G + L
Sbjct: 831  LLVFSVEGQGAERKVDLAAEVETRGAVYVLNGFNGKLLACINSKVQLFRWIEKDDGIQEL 890

Query: 975  LRKCENKLFPNTIVSIN--TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTA 1032
              +C    +   I++++  +  D I VGD+  S     Y+  +  +   A D    W+TA
Sbjct: 891  QTECG---YHGHILALHMQSRGDFIIVGDLMRSVSLLVYKAVDGAIEEVARDYHANWMTA 947

Query: 1033 AHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQF 1092
               ++ D   G +   NI+ +R   D + E E                    ++E   +F
Sbjct: 948  VEMLNDDVYIGGEADCNIFTLRRNADAATEEER------------------ARLEIQGEF 989

Query: 1093 HVGDVVTSLQKASLV--------PGG-------GESVIYGTVMGSLGAMLAFSSRDDVDF 1137
            H+G+ V    + SL+        PGG       G+ +++GTV G +G +L   + D+  F
Sbjct: 990  HLGEFVNKFCRGSLLMQSSEVNSPGGMDSPLVKGQPLLFGTVNGMVGTILTL-TEDNHRF 1048

Query: 1138 FSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIAD 1192
             + L+  M +    + G  H  +RS        P  + IDGDL E +    LD+ R   +
Sbjct: 1049 LAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESY----LDMPRHNQE 1104

Query: 1193 ELDR 1196
            E+ R
Sbjct: 1105 EVLR 1108


>gi|349805695|gb|AEQ18320.1| putative sf3b3 protein [Hymenochirus curtipes]
          Length = 248

 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/177 (47%), Positives = 117/177 (66%), Gaps = 3/177 (1%)

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGD 1001
            ++G  L L Q +    A    V R  + G    +   ENK   N IV I T   R+ V D
Sbjct: 75   IQGNTLGLVQLEQNEAAFSVAVCRFNNAGDDWFV--LENKHIANFIVGIQTIGQRVIVSD 132

Query: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSD 1061
            +QESF + +Y+R+ NQL IFADD+ PRW+T +  +D++T+AGADKFGNI  VRLP +++D
Sbjct: 133  VQESFIWVRYKRN-NQLIIFADDTYPRWVTTSCLLDYETVAGADKFGNICIVRLPPNIND 191

Query: 1062 EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
            +++EDPTG K  W++G LNGA  K E IV +HVG+ V S+QK +L+PGG ES++Y T
Sbjct: 192  DVDEDPTGNKALWDRGLLNGASQKAEVIVNYHVGETVLSVQKTTLIPGGSESLVYTT 248



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 8/106 (7%)

Query: 792 MVIIETDQGALT---AEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQY 848
           ++IIETD  A T     +++   +E  EAAG  E      +      +EN    L +  +
Sbjct: 1   VIIIETDHNAYTEATKAQKQQMAEEMVEAAGEDERELA-AEMAAAFLNEN----LPESIF 55

Query: 849 GYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD 894
           G PKA + +W S +RV++P   NT  L++L+ NEAAFS+    F++
Sbjct: 56  GSPKAGNGQWASVVRVMNPIQGNTLGLVQLEQNEAAFSVAVCRFNN 101


>gi|70929379|ref|XP_736760.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56511568|emb|CAH82825.1| hypothetical protein PC300187.00.0 [Plasmodium chabaudi chabaudi]
          Length = 289

 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 157/262 (59%), Gaps = 11/262 (4%)

Query: 533 EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASV 592
           +W  P    I    SN  Q+V +L+GGEL+YF +D     LE+ K+     + CL +  +
Sbjct: 4   KWVPPNNNHISASTSNGSQIVGSLTGGELLYF-ID-ESHTLEIFKN--INVILCLSVQHI 59

Query: 593 PEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQASVGGED 650
                R+ FL +G  DN +R+LS++ D   + LS   +  +S P+ +   E++  +G + 
Sbjct: 60  QLYILRASFL-LGCLDNVVRLLSIEKDQYFKQLSTYILPNNSSPQDICISEMK-ELGNQK 117

Query: 651 GADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCL 710
             +H   L+LN GL  GVL R+V+D + G LS+  S++LG +  K+  V V    A+L L
Sbjct: 118 --EHTI-LYLNIGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPALLVL 174

Query: 711 SSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFN 770
           S + +L Y+++G+++ +PL+Y+ LEYA+SF S+QC +G V+++GN+LR+F   RLGE F+
Sbjct: 175 SEKTYLCYVYQGKYIYSPLNYDVLEYASSFYSEQCSDGYVAISGNSLRIFRFYRLGEVFS 234

Query: 771 ETALPLRYTPRRFVLQPKKKLM 792
           +  LPL +TPR+ V  P   L 
Sbjct: 235 QNILPLTFTPRKIVPLPFPSLF 256


>gi|452824087|gb|EME31092.1| DNA damage-binding protein 1 isoform 1 [Galdieria sulphuraria]
          Length = 1128

 Score =  169 bits (428), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 274/1271 (21%), Positives = 502/1271 (39%), Gaps = 210/1271 (16%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MY Y +T  + + +  A  G+F      ++++ +   +E+    + G +  ++   I+G 
Sbjct: 1    MYNYVVTAHKASAVTHAAVGSFLSPNNRDLILGKCSRMEIYSLSSEGLVP-VIELPIYGR 59

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            I  +   R     +D +   ++  +  +L +N      D I     G     RI      
Sbjct: 60   ISVMKLCRFPDDLQDSLFFLTEKYKFAVLRWNTQTGECDTIA----GGDVHDRI------ 109

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC----GF 176
                   A  IG C+     + L+        I +  +    +  +  +  +D     G 
Sbjct: 110  --GHPTSAGHIGICDPSMTCFGLHLYDGLFKVIPTDFKKEAFNIRLEELDVLDIQFLYGH 167

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRK--WSEPVDNGANML 234
              P  A +  D             SE  ++L  Y + L          +   +++GA+ML
Sbjct: 168  SKPTIAVLYTD-------------SEENRHLKTYTVSLKDKDFGNGPLFQGNLESGASML 214

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            + VP       GV+V  +  V Y +         IP  A         I  A     K  
Sbjct: 215  IPVP---TPIGGVVVLGQETVTYISGSGLRGYHSIPVSAT--------IFRAYGRIDKDG 263

Query: 295  FFFLLQTEYGDIFKVTLEHDNE---------HVSELKIKYFDTIPVTASMCVLKSGYLFA 345
              +LL  E G ++ + LE              ++ LKI+      + +++  L +G+++ 
Sbjct: 264  TRYLLGDEKGILYLLVLEQSTSLSTFTETETKITGLKIQTLGETSLPSTIDYLDNGFVYI 323

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +  +   +P  E  S   +E  E +                    +L PI
Sbjct: 324  GSCHGDSQLIRLLS---EPHPETGS--FLEVMETYP-------------------NLSPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D  + +   +   Q+ T  G     SLRI+R G+ + E A  ++PGV   ++++K++  
Sbjct: 360  VDFCVMDAERQGQGQVVTCSGAAKDGSLRIIRNGIGIHEQASVEVPGVKE-LFSLKRSSL 418

Query: 466  DEFDAYIVVSFNNATLVLSI--GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
                + +++SF + + VL +   E + E +   F    P+L    +  D ++Q+ PS  R
Sbjct: 419  SSQHSLLLLSFASESRVLELVSTELMAEANFPVFEMQEPTLYCGNVVGDCIVQITPSKAR 478

Query: 524  HIR-EDGRI-NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT-GQLLEVEKHEM 580
             I  ED  I NEW  P    I     N +Q++IA +GG LIYF++D    +++E     +
Sbjct: 479  LISCEDMSIVNEWHPPSGFRISVASGNSMQLIIATTGGNLIYFDIDANPKRIMEKSYKSL 538

Query: 581  SGDVACLDIASVPEGRKR-------SRFLAVGSYDN-TIRILSLDPDDCMQILSVQSVSS 632
              ++  LDI+ + +           S F+AVG +   +IR  SL   D +    +  +  
Sbjct: 539  EYEICSLDISPLGQAGMNLASQAIPSSFVAVGMWTEVSIRFYSLPSLDLIHTEKL-GLDV 597

Query: 633  PPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFL--- 689
               SLLF+ +       DG D+    FL A L +G L    +D  + + +DS  +FL   
Sbjct: 598  IARSLLFVTM-------DGEDY----FL-AALGDGRLLTYRLDK-SAKDTDSEKKFLYDQ 644

Query: 690  -----GLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHR----GRFLLTPLSYETLEYAASF 740
                 G +P  L          +     RP +  IH     G+ L + ++   +    SF
Sbjct: 645  RQMSIGTQPASLSIFETQNALHVFAACDRPTV--IHSSSGGGKLLCSNVNLREVTRVCSF 702

Query: 741  SSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQG 800
            SS+   + +  V   +L + T++ + +  +   +PL   PRR        +  ++ T Q 
Sbjct: 703  SSEAFPDCLALVTEGSLLLGTVDNI-QKLHIRTIPLGEQPRRIAHLDTHHVFAVLTTKQV 761

Query: 801  ALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVS 860
               +E+   A  E  E                                GY          
Sbjct: 762  VTISEDGNEALSETTEE-------------------------------GY---------- 780

Query: 861  CIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD----KEHGTLLAVGTAKGLQFWPKRN 916
             +R++D          +L+  E   S+ TVNF D    K++     VGTA      P+ +
Sbjct: 781  -VRLIDDTMMEIVHSYKLEQFETPCSVITVNFGDDAAAKDNQDYFVVGTAYSYADEPEPS 839

Query: 917  IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY-----DLGK 971
               G + ++   E+   L L+ +   +G   ++  F G++LA +  +L+L      + G 
Sbjct: 840  --RGRMLVFAVREQ--RLTLVAERTFKGALYSMDAFNGKILASVNSMLKLVRWSETESGA 895

Query: 972  KRLLRKC--ENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRW 1029
            + L  +C     +F   I+ I    D I +GD+  S     Y+     +   A D  P W
Sbjct: 896  RTLTEECTYHGSIF---ILQIKCLGDFILIGDLVRSVSLLAYKPMNGTIEDVARDIDPSW 952

Query: 1030 LTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEI 1089
            +T    +D D    A+   N++ ++   D S E E                   +++E++
Sbjct: 953  ITVIEMLDLDYYISAENCFNLFTLKRNSDASTEEER------------------SRLEKV 994

Query: 1090 VQFHVGDVVTSLQKASLV---PGGG----ESVIYGTVMGSLGAMLAFSSRDDVDFFSHLE 1142
             ++H+G++V  ++   LV   P  G    +S++YGT  G+LG + +   +    F   L+
Sbjct: 995  GEYHLGELVNRIRHGRLVLQIPESGISILKSLLYGTANGALGVIASIDEK-TFQFLHSLQ 1053

Query: 1143 MHMRQEHPPLCGRDHMAYRSAYFP-----VKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
              + +    + G  H  +R           K+ +DGDL E+F  LS D    +A +++  
Sbjct: 1054 TALNEVIKGVGGIQHEDWRRFTSERRIGDSKNFLDGDLIERFLDLSRDKMELVAKKVNVP 1113

Query: 1198 PGEILKKLEEI 1208
              E+ K++EE+
Sbjct: 1114 VEELAKQVEEL 1124


>gi|89632640|gb|ABD77552.1| splicing factor 3b subunit 3 [Ictalurus punctatus]
          Length = 131

 Score =  168 bits (426), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 99/128 (77%)

Query: 1084 NKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEM 1143
             K + I+ +H+G+   SLQK +L+PGG ES++Y T+ G +G ++ F+S +D DFF HLEM
Sbjct: 1    QKADIIMNYHIGETALSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLEM 60

Query: 1144 HMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILK 1203
            HMR E PPLCGRDH+++RS YFPVK+VIDGDLCEQF ++    Q+ +A+ELDRTP E+ K
Sbjct: 61   HMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRTPPEVSK 120

Query: 1204 KLEEIRNK 1211
            KLE+IR +
Sbjct: 121  KLEDIRTR 128


>gi|302837243|ref|XP_002950181.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
            nagariensis]
 gi|300264654|gb|EFJ48849.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
            nagariensis]
          Length = 1104

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 289/1256 (23%), Positives = 489/1256 (38%), Gaps = 237/1256 (18%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFGAI 61
            Y +T  +PT +  A+  +F+G     ++ A    LE+  L P+    +  ++   I+G I
Sbjct: 3    YVVTAHKPTAVTHAVVASFTGPNDVNLITACSTRLEIRTLGPQG---LSAVLDVPIYGNI 59

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSK-NVFDKIHQETFGKSGCRRIVPGQYL 120
             +L  FR      D + + ++  +  +L+Y+ +K  +  + + +   + G R    GQ  
Sbjct: 60   SALQVFRPRDLHADLLFILTEKYKFCVLQYDAAKGQLLTRANGDVADRIG-RPAENGQLG 118

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDT---------AARLTISSPLEAHKSHTIVYSICG 171
             VDP  R  +IG      ++ V+  D          + RL   S L+    H       G
Sbjct: 119  VVDPACR--LIGLHLYDGMLKVIPMDDRSGQLSEAFSVRLEELSVLDMAWLHPQPPGGGG 176

Query: 172  IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHV-SRKWSEP-VDN 229
                   P+   +        QD  G       +++  YE+ LG N +    W +  VD+
Sbjct: 177  GGGSPGRPLLCVLH-------QDPKGA------RHVKTYEMQLGANDLLDGPWQQQHVDS 223

Query: 230  GANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH 289
            GA +L+ VP    G   V     +++     G P  +A  P  A L       IV+A   
Sbjct: 224  GAALLIPVPSPLGGVVVVGENVVSYL-----GGPGGQA--PVSAPLRQT----IVTAWCP 272

Query: 290  RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
                   FLL    G +  + L HD   VS L+ +        + +  L SG  F  S  
Sbjct: 273  VDPDGSRFLLGNRQGGMQLLVLAHDGSRVSGLRTEPLGYTCAPSCLAYLDSGLTFVGSRS 332

Query: 350  GNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR 409
            G+  L +  A                     QPV   P  L+    ++   SL PI+D  
Sbjct: 333  GDSQLVRISA---------------------QPVNQPPTYLE---LVDSFPSLAPIVDFV 368

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
            + +L  +   Q+    G     SLR++R G+ ++  A  +LPG+   VW+++ + +DE+D
Sbjct: 369  VMDLERQGQGQLVMCSGIDSDGSLRVVRNGIGINRQATVELPGI-KGVWSLRSHYDDEYD 427

Query: 470  AYIVVSFNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE 527
             Y++++F   T  L L+  E ++E    GF   + +L    +  D L+Q   S +R +  
Sbjct: 428  KYLLLTFVGETRLLALNTEEELDEAELPGFDSGSQTLWCGNMATDHLLQASGSSVRLVDT 487

Query: 528  DG--RINEWR-TPGKRTIVKVGSNRLQVVIALSGGELIYFEV----DMTGQLLEVEKHEM 580
                 ++EWR  PG    V  GS   QVV+A  GG L+Y EV    +   +++E+    +
Sbjct: 488  ASLQLVSEWRPAPGFAIHVAAGSPT-QVVVATGGGHLVYLEVVRRPEGVVEVVEISNVVL 546

Query: 581  SGDVACLDIASV-----------PEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQS 629
              +VAC+D++ +           P G  RS  +AVG +D T+++LS        + S+  
Sbjct: 547  DSEVACVDVSPLMLQQQPLAGEWPGG--RSSVVAVGRWDQTMQLLS--------VPSLAP 596

Query: 630  VSSPPESLLFLEVQASVGGEDGADHPASLFLNA---------GLQNGVLFRTVVDMVTGQ 680
            +SS P           +GGE     P S+   A         GL +G L    +D  TG 
Sbjct: 597  LSSTP-----------LGGE---VIPRSVLCTALEGVPYCMVGLGDGALHTWRLDPATGG 642

Query: 681  LSDSRSRFLGLRPPKLFSVVVGG------------------RAAMLCLSSRPWLGYIHRG 722
            LSD +   LG +P  L +                         ++   S RP + Y    
Sbjct: 643  LSDKKRLVLGTKPIMLRTFRTAAAVSGGGGGSLRGSGGGHGGVSVFAASDRPTVVYSSNK 702

Query: 723  RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRR 782
            + L + L+   + + ASF S      +   +  AL + T + + +  +  A+PL   PRR
Sbjct: 703  KLLYSNLNENDVAFLASFHSAAFPRSLAVASEGALTIGTADEI-QKLHVRAVPLGENPRR 761

Query: 783  FVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDP 842
                   +++       G LT                M  + +G+        D+  +D 
Sbjct: 762  IAHHEGARML-------GVLT----------------MRLDSDGSERSFLRLLDDTTFDV 798

Query: 843  LSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLA 902
            ++   Y     E    + C     P S+N T  +       A + C              
Sbjct: 799  VA--SYALAPGE----MPCSLAAWPGSSNGTAAV------GALNAC------------FL 834

Query: 903  VGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF-QGRLLAGIG 961
            VGTA  +   P+     G I +   V       L+ + +V+G    +  F + ++LA + 
Sbjct: 835  VGTAFIVPEEPEPT--KGRILVLEHV------RLVTEKEVKGAAYNVLPFVKDKILASVN 886

Query: 962  PVLRLY--DLGKKRLLRKCENKLFPNTI-VSINTYRDRIYVGDIQESFHFCKYRRDENQL 1018
              +     DLG  R+    E     N + + + T  + + VGD+  S     Y  ++  L
Sbjct: 887  SKVPASGCDLGGVRVELASECSYLGNILALYLATRGNLVVVGDLMRSVSLLSYNVEQGVL 946

Query: 1019 YIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGK 1078
               A D    W T+   +D DT    D   N+  +R   D + + E              
Sbjct: 947  EHRAADYNSGWTTSVEALDDDTYLEGDNHLNLVVLRRNADSATDEER------------- 993

Query: 1079 LNGAPNKMEEIVQFHVGDVVTSLQKASLV--PGGGESV------IYGTVMGSLGAMLAFS 1130
                  +++ + ++H G  V   +  SLV  P   E V      ++G   G LG ++A  
Sbjct: 994  -----ARLQVVGEYHTGTFVNRFRHGSLVMRPPDSEFVSLPVPLLFGGTDGRLG-VIARL 1047

Query: 1131 SRDDVDFFSHLEMHMRQEHPPLCGRDHMAY-------RSAYFPVKDVIDGDLCEQF 1179
                 +  + L+  +RQ    + G  H A+       R+A    K  +DGDL E F
Sbjct: 1048 PPGLYEMLTKLQSALRQVVRGVGGLSHEAWIAFSNERRTA--DAKGFVDGDLIETF 1101


>gi|17541566|ref|NP_502299.1| Protein DDB-1 [Caenorhabditis elegans]
 gi|74965443|sp|Q21554.2|DDB1_CAEEL RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|5824558|emb|CAA92824.2| Protein DDB-1 [Caenorhabditis elegans]
          Length = 1134

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 275/1268 (21%), Positives = 507/1268 (39%), Gaps = 205/1268 (16%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVL--ELLRPENSGRIETLVSTEIFGAI 61
            Y ++ ++ + ++ ++ GNF+G +   ++VARG  +  +L+ PE    ++ +    I+G +
Sbjct: 5    YCVSAKKASVVVESVVGNFTGHENVNLIVARGNRIDVQLVSPEG---LKNVCEIPIYGQV 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLA 121
             ++A  +    ++  ++V ++   + IL Y   K V           +GC          
Sbjct: 62   LTIALVKCKRDKRHSLIVVTEKWHMAILAYRDGKVVTRA--------AGC---------I 104

Query: 122  VDPKGRA---VMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
             DP GRA   +      +  L+ +   + + ++         +S T    +   +  FD 
Sbjct: 105  ADPTGRATDNLFSLTIHRNGLIAIRAFEGSVKMI------QWESGT---DLRHFNVRFDY 155

Query: 179  PIFAAIELDYSEADQDSTGQAA----SEAQKNLTFYELDLG---LNHVSRKWSEPVDNGA 231
            P  +  +  + +  +D   + A     +  K+L F +L++        SR+ S   D  +
Sbjct: 156  PNVS--DFKFVDTGEDDVYRVAFIYDDDHGKHLQFSDLNMHDKEFRTYSRQASIAAD--S 211

Query: 232  NMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVL---IVSAAT 288
            ++L+ VP       GV+V   N V+YK   + ++  V+P    L          IV A+ 
Sbjct: 212  SVLIPVP---HAIGGVIVLGSNSVLYK--PNDNLGEVVPYTCSLLENTTFTCHGIVDASG 266

Query: 289  HRQKTLFFFLLQTEYGDIF----KVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
             R      FLL    G +      VT       V E++I Y     +  S+  + +G +F
Sbjct: 267  ER------FLLSDTDGRLLMLLLNVTESQSGYTVKEMRIDYLGETSIADSINYIDNGVVF 320

Query: 345  AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
              S  G+  L +                             +P G    V +E   ++ P
Sbjct: 321  VGSRLGDSQLIRLMT--------------------------EPNGGSYSVILETYSNIGP 354

Query: 405  IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
            I DM +     +  PQ+ T  G     SLR++R G+ + E+A   L GV   ++ ++ + 
Sbjct: 355  IRDMVMVE--SDGQPQLVTCTGADKDGSLRVIRNGIGIDELASVDLAGV-VGIFPIRLDS 411

Query: 465  NDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSL----AVSLIG-DDS--LMQV 517
            N   D Y++VS ++ T VL I  T EE+ D   L+    L    A +L G +DS  ++Q 
Sbjct: 412  N--ADNYVIVSLSDETHVLQI--TGEELEDVKLLEINTDLPTIFASTLFGPNDSGIILQA 467

Query: 518  HPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE---VDMTGQL-- 572
                IR +   G    W       I KV  N     I L+  + +Y     VD  G L  
Sbjct: 468  TEKQIRLMSSSGLSKFWEPTNGEIISKVSVNAANGQIVLAARDTVYLLTCIVDEMGALDI 527

Query: 573  -LEVEKHEMSGDVACLDIASVPEG---RKRSRFLAVGSYDN-TIRILSLDPDDCMQILSV 627
             L  EK +   ++ACLD+++  EG     ++ FL +  +    + ++ L PD    +++V
Sbjct: 528  QLTAEK-KFENEIACLDLSN--EGDDPNNKATFLVLAFWSTFAMEVIQL-PD----LITV 579

Query: 628  QSVSSP----PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSD 683
                 P    P S++   ++          H    +L     +G L   V D+ TG   +
Sbjct: 580  CHTDLPTKIIPRSIIATCIEEV--------H----YLLVAFGDGALVYYVFDIKTGTHGE 627

Query: 684  SRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSD 743
             +   +G RPP L  V    R  +   S RP + +    + + + ++ + ++   S SS 
Sbjct: 628  PKKSNVGTRPPSLHRVRNKNRQHLFVCSDRPVIIFSASKKLVFSNVNVKLVDTVCSLSSS 687

Query: 744  QCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT 803
               + +V   GN++   T++ + +  +  ++P+  +  R   Q          T    + 
Sbjct: 688  AYRDCLVISDGNSMVFGTVDDI-QKIHVRSIPMGESVLRIAYQKS--------TSTYGVC 738

Query: 804  AEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIR 863
            +   E+  +  F +                  D ++  P +               S   
Sbjct: 739  SNRTESKAERVFASKNALVTSQSRPKVASTRADMDESPPNT--------------TSSFM 784

Query: 864  VLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIH 923
            VLD  +       E    E A S  +  F + +  T   VGT  GL +  +     G I 
Sbjct: 785  VLDQNTFQVLHSHEFGPWETALSCISGQFTN-DSSTYYVVGT--GLIYPDETETKIGRIV 841

Query: 924  IYRF--VEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
            ++    VE  K L  +H+  V G PLA+    G+L+A I   +RL++    + LR  E  
Sbjct: 842  VFEVDDVERSK-LRRVHELVVRGSPLAIRILNGKLVAAINSSIRLFEWTTDKELR-LECS 899

Query: 982  LFPNTI-VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDT 1040
             F + I + +    + + V D+  S     YR  E      A D   +W+     I  ++
Sbjct: 900  SFNHVIALDLKVMNEEVAVADVMRSVSLLSYRMLEGNFEEVAKDWNSQWMVTCEFITAES 959

Query: 1041 MAGADKFGNIYFVRLPQDVSDEIEED------PTGGKIKWEQGKLNGAPNKMEEIVQFHV 1094
            + G +   N++ V +  D +  I +D      PTG    W  G+L     +   ++Q   
Sbjct: 960  ILGGEAHLNLFTVEV--DKTRPITDDGRYVLEPTG---YWYLGELPKVMTRSTLVIQ--- 1011

Query: 1095 GDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCG 1154
                    + S++    + +++GT  G++G ++    +    F   +E  +         
Sbjct: 1012 -------PEDSIIQ-YSQPIMFGTNQGTIGMIVQIDDKWK-KFLIAIEKAIADSVKNCMH 1062

Query: 1155 RDHMAYRSAYF-----PVKDVIDGDLCEQF----PTLSLDLQRKIADE-----LDRTPGE 1200
             +H +YR+  F     P    +DGDL E       ++++D+  K++D+     L R P E
Sbjct: 1063 IEHSSYRTFVFQKRAEPPSGFVDGDLVESILDMDRSVAMDILSKVSDKGWDPSLPRDPVE 1122

Query: 1201 ILKKLEEI 1208
            ILK +E++
Sbjct: 1123 ILKVIEDL 1130


>gi|268536658|ref|XP_002633464.1| C. briggsae CBR-DDB-1 protein [Caenorhabditis briggsae]
          Length = 1134

 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 283/1258 (22%), Positives = 494/1258 (39%), Gaps = 185/1258 (14%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVL--ELLRPENSGRIETLVSTEIFGAI 61
            Y ++ ++ + +  ++ GNF+G    +++VARG  +  +L+ PE    ++ +    I+G +
Sbjct: 5    YCVSAKKASVVTESVVGNFTGQDNVDLIVARGNRIDVQLVTPEG---LKNICEIPIYGQV 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLA 121
             +++  +    ++  +VV +D   + +L Y   K V  +        SG R       + 
Sbjct: 62   STISLIKFRREKQHSLVVVTDKFNLAVLGYRDGK-VITRAAGSIAEYSG-RSADTAVAMT 119

Query: 122  VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIF 181
            +   G   +IG     K+V+    +  A +           +  V     +D G D+ + 
Sbjct: 120  IHRSGLIAIIGYEGSVKMVH---WEPGADV---RHFNVRFDYPNVSDFKFVDTGDDDTVR 173

Query: 182  AAIELDYSEADQDSTGQAASEAQKNLTFYELDLG---LNHVSRKWSEPVDNGANMLVTVP 238
             A   D      D  G       K+L F +L++     +  S++     D+   + V  P
Sbjct: 174  VAFIYD------DDHG-------KHLQFSDLNMHDKEFHTFSKQSCIAADSQVLIPVPAP 220

Query: 239  GGGDGPSGVLVCAENFVIYKNQGHPDVRA-VIPRRADLPAERGVL---IVSAATHRQKTL 294
             GG     V+V   N  +YK     DV   V+P    L          IV A+  R    
Sbjct: 221  VGG-----VIVLGANSALYKAS---DVNGDVVPYSCSLLKNTIFTCHGIVDASGDR---- 268

Query: 295  FFFLLQTEYGDIFKVTLE----HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFG 350
              FLL    G +  + L          V E++I+Y     V  S+  + +G +F  S  G
Sbjct: 269  --FLLADTDGRLLMLLLNIGEGRSGTTVKEMRIEYLGETSVADSVNYVDNGVVFVGSRLG 326

Query: 351  NHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI 410
            +  L +                              P G    V +E   +  PI DM +
Sbjct: 327  DSQLIRLMT--------------------------APNGGSYSVVLETYTNTGPIRDMVL 360

Query: 411  ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA 470
                 +  PQ+ T  G     SLR++R G+ + E+A   L  V        ++  D F  
Sbjct: 361  VE--SDGQPQLVTCSGADKDGSLRVIRNGIGIEELASVDLAKVIGMFPIRLRSTTDNF-- 416

Query: 471  YIVVSFNNATLVLSIGETVEEVSDSGFLDT----TPSLAVSLIG-DDS--LMQVHPSGIR 523
             ++VS  + T VL I  T EE+ D   L+     T   A SL G DDS  ++QV    IR
Sbjct: 417  -VIVSLPDETHVLKI--TGEELEDVQLLEIETERTTMYASSLFGPDDSELILQVTEEEIR 473

Query: 524  HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYF---EVDMTGQL--LEVEKH 578
             +    ++  WR     ++ KV  N +   I ++  + +Y+    VD  G L    V + 
Sbjct: 474  FMSFQKQVKIWRPTNGESVSKVSVNAIHGQIVVAARDTVYYLKCMVDEAGALDIQIVAER 533

Query: 579  EMSGDVACLDIASVPEGRKRSRFLAV----GSYDNTIRILSLDPDDCMQILSVQSVSSPP 634
            +   ++ACLDI++  +  K+     V    GS+   +  LS     C   L  + V   P
Sbjct: 534  KFEAEIACLDISNEGDDYKKPGTFMVLALWGSFSMEVVQLSDLKTACQTNLPSKIV---P 590

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             S++   ++          H    +L     +G L   V D+ TG   +++   +G RPP
Sbjct: 591  RSIVATCIEDV--------H----YLLVAFGDGALIYYVFDIKTGTHGEAKKSSVGTRPP 638

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG 754
             L  V    R  +   S RP + +    + + + ++ + +    S SS    + +V   G
Sbjct: 639  SLHRVRNKNRQHLFVCSDRPVIIFSANKKLVFSNVNVKVVNTVCSLSSTSYRDCLVISDG 698

Query: 755  NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKEC 814
            N++   T++ + +  +  ++P+  +  R   Q       +  +   + T  ER  A K  
Sbjct: 699  NSMVFGTVDDI-QKIHIRSIPMGESVMRIAYQKSTGTYGVCSSR--SETKPERVYASK-- 753

Query: 815  FEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                          + + N     K     +E    P A +    S   +LD  +     
Sbjct: 754  --------------NALANSQSRAKIVATRNEVNDGPPAST----SSFMILDQNTFQVLH 795

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVE-EGKS 933
              E    EAA S  +  F D      + VGT  GL +  + +   G I ++   + E   
Sbjct: 796  AHEFGPFEAAVSCISGQFSDDARQYYI-VGT--GLIYPDESDTKLGRIIVFEVDDVERTK 852

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR-KCENKLFPNTIVSIN- 991
            L  +H+  V G PLAL    G+L+A I   +RL++    ++LR +C N    N IV+++ 
Sbjct: 853  LRRVHELVVRGSPLALRILNGKLVAAINSSVRLFEWTADKVLRLECSNF---NHIVALDL 909

Query: 992  -TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
                + + V D+  S     YR  E      A D    W+     I  +++ G +   N+
Sbjct: 910  KVMNEEVAVADLMRSVSLLSYRMMEGNFEEVAKDWNSEWMVTCEFITAESILGGEAHLNM 969

Query: 1051 YFVRLPQDVSDEIEED------PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKA 1104
            + V +  D S  I +D      PTG    W  G+L     +   +VQ     +  S    
Sbjct: 970  FTVEV--DKSRPITDDGRYVLEPTG---YWYLGELPKVMVRASLVVQPEDSTIEYS---- 1020

Query: 1105 SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY 1164
                     +++GT  G++G ++    +    F   +E  +          +H  YRS  
Sbjct: 1021 -------HPIMFGTNQGTIGMLVQIDDKWK-KFLVSIEKAISDSVKNCMQIEHSTYRSFI 1072

Query: 1165 F-----PVKDVIDGDLCEQF----PTLSLDLQRKIADE-----LDRTPGEILKKLEEI 1208
            F     P    IDGDL E       ++++D+ +K++D+     L R P E+LK +E++
Sbjct: 1073 FQKRIEPPSGFIDGDLVESILDMDRSVAIDILKKVSDKGWDASLPRDPVEMLKVIEDL 1130


>gi|414872273|tpg|DAA50830.1| TPA: hypothetical protein ZEAMMB73_069624 [Zea mays]
          Length = 507

 Score =  163 bits (413), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 81/90 (90%), Positives = 85/90 (94%)

Query: 589 IASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGG 648
           IA VPEGR+RSRFLAVGSYDNTIRILSLDPDDC+Q LSVQSVSS PESLLFLEVQASVGG
Sbjct: 127 IAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGG 186

Query: 649 EDGADHPASLFLNAGLQNGVLFRTVVDMVT 678
           EDGAD+PA+LFLNAGLQNGVLF T VDMVT
Sbjct: 187 EDGADYPANLFLNAGLQNGVLFHTNVDMVT 216


>gi|194381178|dbj|BAG64157.1| unnamed protein product [Homo sapiens]
          Length = 826

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 181/785 (23%), Positives = 338/785 (43%), Gaps = 96/785 (12%)

Query: 450  LPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSL 508
            LPG+   +W ++ + N E D  +V+SF   T VL + GE VEE    GF+D   +     
Sbjct: 90   LPGI-KGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGN 148

Query: 509  IGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV 566
            +    L+Q+  + +R + ++ +  ++EW+ P  + I     N  QVV+A+ G  L Y ++
Sbjct: 149  VAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQI 207

Query: 567  DMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--Q 623
                +L ++   EM  +VACLDI  + +    S   A+G + D + RIL L   + +  +
Sbjct: 208  H-PQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKE 266

Query: 624  ILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSD 683
            +L  + +   P S+L    ++S        H    +L   L +G LF   +++ TG LSD
Sbjct: 267  MLGGEII---PRSILMTTFESS--------H----YLLCALGDGALFYFGLNIETGLLSD 311

Query: 684  SRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSD 743
             +   LG +P  L +        +   S RP + Y    + + + ++ + + Y    +SD
Sbjct: 312  RKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSD 371

Query: 744  QCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET-----D 798
               + +     + L + TI+ + +    T +PL  +PR+   Q   +   ++ +     D
Sbjct: 372  GYPDSLALANNSTLTIGTIDEIQKLHIRT-VPLYESPRKICYQEVSQCFGVLSSRIEVQD 430

Query: 799  QGALTAEEREAAKKECFEAAGMGENGNGNM---DQMENGDDENKYDPLSDEQYGYPKAES 855
                T   R +A  +   ++        +     +   G++   ++ L  +Q+ +    +
Sbjct: 431  TSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHA 490

Query: 856  DKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGL--QFWP 913
             +++                     NE A S+ +     K+  T   VGTA     +  P
Sbjct: 491  HQFL--------------------QNEYALSLVSCKL-GKDPNTYFIVGTAMVYPEEAEP 529

Query: 914  KRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKR 973
            K+    G I ++++  +GK L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++
Sbjct: 530  KQ----GRIVVFQY-SDGK-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEK 583

Query: 974  LLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAA 1033
             LR   N       + + T  D I VGD+  S     Y+  E      A D  P W++A 
Sbjct: 584  ELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAV 643

Query: 1034 HHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFH 1093
              +D D   GA+   N++  +  +D +   +E+                   ++E+  FH
Sbjct: 644  EILDDDNFLGAENAFNLFVCQ--KDSAATTDEE----------------RQHLQEVGLFH 685

Query: 1094 VGDVVTSLQKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMH 1144
            +G+ V      SLV         P  G SV++GTV G +G + +  S    +    ++  
Sbjct: 686  LGEFVNVFCHGSLVMQNLGETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNR 743

Query: 1145 MRQEHPPLCGRDHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
            + +    +   +H  +RS +      P    IDGDL E F  +S    +++   L    G
Sbjct: 744  LNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDG 803

Query: 1200 EILKK 1204
              +K+
Sbjct: 804  SGMKR 808


>gi|303271531|ref|XP_003055127.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463101|gb|EEH60379.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1223

 Score =  159 bits (403), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 286/1331 (21%), Positives = 506/1331 (38%), Gaps = 252/1331 (18%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFG 59
            Y Y +T Q+PT +  ++ GNF+      +VVA+   +E  LL P+    ++ ++   I+G
Sbjct: 16   YNYVVTAQKPTSVTHSVVGNFTHEDELNLVVAKCTRVEIHLLTPQG---LQAMMDVPIYG 72

Query: 60   AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             I ++   R    +K  + + ++     +L Y+ +K                R    G  
Sbjct: 73   RIATMELVRPPFEKKPMLFILTERNMFCVLSYDAAKGELITRAMGDLTDRVGRPSECGPI 132

Query: 120  LAVDPKGRAVMIGACEKQKLVYVLNRDTAARL--TISSPLEAHKSHTIVYSICGIDCGFD 177
             AVDP+ R  M G      L  V+  D   +L    S  LE  +   + +       G  
Sbjct: 133  GAVDPECR--MYGLHLYDGLFKVIPMDQTGQLREAFSVRLEELQVFDVKFL-----AGTP 185

Query: 178  NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSR-KWSE-PVDNGANMLV 235
             P  A +  D  E              +++  YE+ L     +   W++  V++G+  L+
Sbjct: 186  KPTIAVLYQDTKEG-------------RHIKTYEVCLKDKDFNPGPWAQNDVESGSRFLI 232

Query: 236  TVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
             VP     P  GV+V  E  + Y N+       V           G +IV A   +    
Sbjct: 233  AVPA----PLGGVVVVGEKVIAYLNK--ETTHGVGDGGGGGGGGGGGMIVKAIAMQSDAT 286

Query: 295  FF-----------FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYL 343
                         +LL    G +  + L HD   V  LK++      + +S+  L +G +
Sbjct: 287  IMTYGAVDKDGSRYLLSDSAGRLHLLVLMHDKTRVRALKLESLGQTSIASSLSYLDNGVV 346

Query: 344  FAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLK---NLVRI-EQV 399
            +  S +G+  L +  +                   G + V      +    N V + E  
Sbjct: 347  YVGSAYGDSQLVRLHSTPIPIAGGGGGDGDGGGGGGGEIVPVDSGAVTDAPNYVEVLESF 406

Query: 400  ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
             SL PI+D  + +L      Q+ T  G     SLR++R G+ + E A  +LPGV    W 
Sbjct: 407  TSLGPIVDFVVVDLDRHGQGQVVTCSGVHKDGSLRVVRNGVGIHEQAAIELPGV-KGCWA 465

Query: 460  VKKNVNDEFDAYIVVSFNNATLVLSIGET--VEEVSDSGFLDTTPSLAVSLIGDDSLMQV 517
            +K   +   D ++VV+F   T +L+I +   ++E    GF     +LA + +      QV
Sbjct: 466  LKNADDAVSDTFLVVAFIGETRILAINDKDELDETEFEGFAGDERALACANVDGGYACQV 525

Query: 518  HPSGIRHIR-EDGRINEWRT--PGKRTIVKVGSNRLQVVIALSGGELI---------YFE 565
               GIR +    G +    T  PG+R  V   +NR QVV+AL GG L+           +
Sbjct: 526  TSGGIRLVDVATGALRARWTPEPGERVSV-AAANRTQVVVALEGGTLVSVAAGGGGDAMD 584

Query: 566  VDMTGQLL-EVEKHEMSGDVACLDIASVPEGR-KRSRFLAVGSYDNTIRILSLDPDDCMQ 623
            VD    LL E+ +  +  ++ACLD+  + + R   S   AVG +   +R+L+    + + 
Sbjct: 585  VDDASPLLRELARVNVGHEIACLDVTPLADPRAASSEICAVGLWSAEVRVLATATLEELS 644

Query: 624  ILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFR-TVVDMVTGQLS 682
               +      P ++L    +               +L AGL +G LF   ++   +G + 
Sbjct: 645  SAPLTDAEVIPRAVLLCSFEGIP------------YLLAGLGDGQLFTFALMGERSGIIG 692

Query: 683  DSRSRFLGLR--------------PPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTP 728
            D +   +G +              P  L +        +   S RP + Y    + + + 
Sbjct: 693  DGKKLSVGTQARSIHWFPYDRVGVPITLKTFRNKNTTHVFAGSDRPTVIYSQNKKLIYSN 752

Query: 729  LSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPK 788
            ++   + +  +F+ D   + +   + + L +  I+ + +    T +PL   PRR   QP 
Sbjct: 753  VNLREVLHMCAFNCDAFPDSLALASESELTIGGIDDIQKLHIRT-VPLGEQPRRIAHQPA 811

Query: 789  KKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQY 848
             +   ++ +    +T EE    +   F                    D+  ++ L   +Y
Sbjct: 812  SRTFAVLTSHVSDVTNEESFYVR--LF--------------------DDVTFETLF--KY 847

Query: 849  GYPKAESD-KWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAK 907
                 E+D   +SC                  D+ A++ +    F   E           
Sbjct: 848  RLDVGETDSSIISC---------------SFADDPASYYVVGTAFSLPE----------- 881

Query: 908  GLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY 967
              +  P R    G I + R  +EG+ L L+ + +V+G    L  F G+LLAGI   ++L+
Sbjct: 882  --EVEPSR----GRILVLR-ADEGR-LSLVAEKEVKGAVYNLNAFNGKLLAGINSKVQLF 933

Query: 968  DLGKK---------------------------------------RLLRKCENKLFPNTIV 988
                +                                        L  +C +      IV
Sbjct: 934  KWVSRGAGAGAGAGGGAEGGAVAMADGGGGGGGGGGAPAAATTCELASECSHH---GHIV 990

Query: 989  S--INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADK 1046
            +  ++   D I VGD+ +S     Y+ DE  +   A D  P W+TA   +D +T  GA+ 
Sbjct: 991  ALYVDVRGDFIVVGDLMKSISLLVYKPDEGVIEERARDFNPNWMTAVCALDDETYLGAEN 1050

Query: 1047 FGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL 1106
              N++ VR   D + + E                   ++++ I ++H+G+ V   +  SL
Sbjct: 1051 SFNLFTVRKNSDAAADEER------------------SRLDVIGEYHLGEFVNRFRAGSL 1092

Query: 1107 V------------------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQE 1148
            V                       + ++GTV G++G + +        F + L+  M + 
Sbjct: 1093 VMRLPGDGDGAGLGLGLDASNEAPTQLFGTVNGAIGVVASLPESTHT-FLAALQKAMNKV 1151

Query: 1149 HPPLCGRDHMAYRSAY-------FPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG-- 1199
               + G  H A+RS +          +  +DGDL E F    LDL+ + A E+    G  
Sbjct: 1152 VSGVGGFSHDAWRSFHNEHRSRLVEARGFVDGDLIESF----LDLRPEKASEVASVVGVG 1207

Query: 1200 --EILKKLEEI 1208
              E+ K++EE+
Sbjct: 1208 VEELTKRIEEL 1218


>gi|1399512|gb|AAC47162.1| repE [Dictyostelium discoideum]
          Length = 1139

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 266/1271 (20%), Positives = 495/1271 (38%), Gaps = 245/1271 (19%)

Query: 49   IETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN-PSKNVFDKIH---QE 104
            ++ +    I+G I  L  F + GS++DY+ + ++S +  IL Y+   K +  K     ++
Sbjct: 6    LKPMFDVNIYGRISVLKLFSVAGSKQDYLFISTESFKFCILAYDYEKKEIITKASGNAED 65

Query: 105  TFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTIS---------- 154
            T G    R    GQ   +DP GR V +   E    +  L+ +       +          
Sbjct: 66   TIG----RPTEAGQLGIIDPDGRIVALHLYEGLLKLITLDNNNTPNKINNNNNNNNNNNN 121

Query: 155  -----------------------SPLEAHKSHTIVYSICGIDCGF----DNPIFAAIELD 187
                                   SP++ + ++  +  +  +D  F      P  A +  D
Sbjct: 122  NNNNNNNNNINNNNFNINNNNNNSPIQKNVNNVRLEELQVLDMTFLYGCKVPTIAVLFKD 181

Query: 188  YSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP-VDNGANMLVTVPGGGDGPSG 246
              +    ST + +S+        EL +G       WS+  V   +++LV VP GG     
Sbjct: 182  TKDEKHISTYEISSKDT------ELVVG------PWSQSNVGVYSSLLVPVPLGG----- 224

Query: 247  VLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDI 306
            VLV A+N + Y N         + R   +   + +    A T   K    FL    +G +
Sbjct: 225  VLVVADNGITYLN-------GKVTRSVAVSYTKFL----AFTRVDKDGSRFLFGDHFGRL 273

Query: 307  FKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDV 366
              + L H  + V ELK +    I + +S+  L SG ++  S  G+      Q I  + + 
Sbjct: 274  SVLVLIHQQQKVMELKFEQLGRISIPSSISYLDSGVVYIGSSSGDS-----QLIRLNTEK 328

Query: 367  EASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCG 426
            + ++ + +   E F                    ++ P++D  + +  ++   QI T  G
Sbjct: 329  DQTTDSYVTYLEAFT-------------------NIGPVVDFCVVDAEKQGQAQIVTCSG 369

Query: 427  RGPRSSLRILRPGLAVSEMAVSQLPGVP--------------------SAVWTVKKNVND 466
                 SLRI+R G+ ++E A  +L G+                     +        + D
Sbjct: 370  TYRDGSLRIIRNGIGIAEQASIELEGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITD 429

Query: 467  EFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGD-DSLMQVHPSGIRH 524
              D Y++ SF   T VLS  GE +EE    G      +L    I   + L+Q+    I  
Sbjct: 430  SKDRYLITSFIECTKVLSFQGEEIEETEFEGLESNCSTLYCGTIDKLNLLIQITNVSINL 489

Query: 525  IRED--GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-EMS 581
            I  +   R+++W     R I  V +N+ Q+V+++    L+YF+++ + + +++ K  E+ 
Sbjct: 490  IDSNTFKRVSQWNVEPSRRINLVSTNQDQIVLSIDKS-LLYFQINSSNKSIQLVKEIELP 548

Query: 582  GDVACLDIASVPEGR-KRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLF 639
             +++C+DI+        +S+ ++VG + D T+RI  L         +++ +   P     
Sbjct: 549  HEISCIDISPFDSFMDTKSQLVSVGLWNDITLRIFKLP--------TLEEIWKEPLGGEI 600

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
            L     +   D  D     ++   L +G LF+   D  + +L D R   LG +P  L   
Sbjct: 601  LPRSILMISFDSID-----YIFCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKF 655

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
             +     +  +S RP + Y H  +   + ++ + +    SF+SD     +     N+L +
Sbjct: 656  KLKNTINIFAISDRPTVIYSHNKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTI 715

Query: 760  FTIERLGETFNETALPLRYTPRRFVLQPKKK---LMVIIETDQGALTAEEREAAKKECFE 816
             TI+ + +   +T +PL     R ++  +      ++ ++ ++G L       A+  C  
Sbjct: 716  GTIDEIQKLHIKT-IPLNEEMGRRIVHLEDHSCYAVITVKNNEGLLG-----GAQDLC-- 767

Query: 817  AAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLL 876
                                                 E D+ VS IR+ + ++       
Sbjct: 768  -------------------------------------EEDEEVSYIRIYNDQTFELISSY 790

Query: 877  ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVE------- 929
            +L   E  +SI    F   +  T LAVGT+          ++   +              
Sbjct: 791  KLDPYEMGWSITPCKFAGDDVNTYLAVGTSINTPIKSSGRVLLFSLSSSSSSNDKDSLDN 850

Query: 930  ----------EGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL----GKKRLL 975
                       GK L LL + +       L  F GRL+A +    RL+ +     K++  
Sbjct: 851  NNNNNNNSGANGK-LTLLEEIKFRSSVYFLLSFNGRLIAAVHK--RLFSIRYTHSKEKNC 907

Query: 976  RKCENKLF---PNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTA 1032
            +   ++        I+ + +    I VGD+ +S      + D   L   A +  P W+ +
Sbjct: 908  KVISSESVHKGHTMILKLASRGHFILVGDMMKSMSLLVEQSD-GSLEQIARNPQPIWIRS 966

Query: 1033 AHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQF 1092
               I+ D   GA+   N   V+   D ++E+E +                   ++ +  +
Sbjct: 967  VAMINDDYFIGAEASNNFIVVKKNNDSTNELEREL------------------LDSVGHY 1008

Query: 1093 HVGDVVTSLQKASLV--PGGGE----SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR 1146
            H+G+ + S++  SLV  P   +    +++Y +V GS+G + + S  D + FFS L+  + 
Sbjct: 1009 HIGESINSMRHGSLVRLPDSDQPIIPTILYASVNGSIGVVASISEEDFI-FFSKLQKGLN 1067

Query: 1147 QEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEI 1201
            Q    + G  H  +R+          K+ IDGDL E F  L  + Q K   +L  TP + 
Sbjct: 1068 QVVRGVGGFSHETWRAFSNDHHTIDSKNFIDGDLIETFLDLKYESQLKAVADLGITPDDA 1127

Query: 1202 LKKLEEIRNKI 1212
             +++E +   I
Sbjct: 1128 FRRIESLMQYI 1138


>gi|328700785|ref|XP_001945395.2| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
          Length = 1072

 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 256/1141 (22%), Positives = 442/1141 (38%), Gaps = 178/1141 (15%)

Query: 30   IVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVIL 89
            ++VA+   +E+      G +  L  TE+ G I  L  FR      D I V +     +IL
Sbjct: 63   LIVAKLNCIEIYLINEHGLL-LLSETELNGKIEILKVFRPKSKTTDLIFVVTAQYNAMIL 121

Query: 90   EYNPSKNVFDKIHQETFGKSGCRRI----VPGQYLAV-DPKGRAVMIGACEKQKLVYVLN 144
            EY       DKI  E   K  C       V  +++ + DP  + VM+   EK  +  ++ 
Sbjct: 122  EYTQGS---DKI--EMMTKGHCNVFDHFGVATEFMGIIDPNAKLVMLKLFEK--MFKIIP 174

Query: 145  RDTAARLTISS-PLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEA 203
             D    L + S  +E      I     G   GF NP    I        +++ G+     
Sbjct: 175  LDKEGELDVYSITMEETNIQDI-----GFLYGFTNPTIIIIY-------ENAMGRTIKIK 222

Query: 204  QKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
            +              +  K  + ++  A+M++ VP       G ++  EN + Y N    
Sbjct: 223  KI-------------IDSKKYKSIEKEASMVIPVPSP---LCGAIIIGENSIFYHNGSCN 266

Query: 264  DVR--------AVIPRRADLPAERGVLIVSAATHRQKTLFFFL-LQTEYGDIFKVTLEHD 314
             +R         V   R DL   R +L      H    L  FL  +      FKVT    
Sbjct: 267  IIRLPIRQKIEIVCYTRVDLEGTRYLL----GDHSGCLLMLFLKYEKTLNGKFKVT---- 318

Query: 315  NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL----YQFQAIGADPDVEASS 370
                 +L ++YF  I +  S+  L +  ++ AS+FG+  L    Y+    G+        
Sbjct: 319  -----DLYLRYFGEISIPISLTYLDNKVIYVASKFGDSQLIKLHYELNETGS-------- 365

Query: 371  STLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPR 430
                                 +L  ++Q  +L PI+DM + ++ +    QI T  G    
Sbjct: 366  ---------------------HLTILDQYLNLGPIVDMCLVDIDQRGQEQIVTCSGAYKD 404

Query: 431  SSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI-GETV 489
             SLRI+  G+ + E+A   L G+   +W++  N   + D  +V+SF   + VL+   E  
Sbjct: 405  GSLRIINNGVGIQEIATIDLLGI-KGIWSLSFNTKSDLDDTLVLSFVWHSKVLAYDSEEA 463

Query: 490  EEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGS 547
            EE+   GF     +       D+ ++QV  + +R I  + +  I+EW+ P  R I  V  
Sbjct: 464  EEIYVEGFESELQTFYCGKTLDNKMVQVTSASVRLICMESKKLISEWKVPYFRNINAVSC 523

Query: 548  NRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS-RFLAVGS 606
            N  Q V + SG +L Y E+  + ++ + +   +  +V+CLDI    +    +   LA+G 
Sbjct: 524  NGHQAVCS-SGHDLYYIEIG-SQKIFQNKHITLEHEVSCLDICLFKDKFGETIILLAIGL 581

Query: 607  Y-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL------- 658
            + D +I++L L PD                   F+E++     E       S        
Sbjct: 582  WTDTSIKVLKL-PD-------------------FVELEKENLFEGIVPRSVSFVTLENIH 621

Query: 659  FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGY 718
            +L   L NG L    +++ TG+L  +    LG RP  L        +  +C S  P + +
Sbjct: 622  YLFCALGNGSLCYFYLNIETGKLYKNGKIKLGNRPA-LIKKFQTASSIFIC-SDFPIIIH 679

Query: 719  IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRY 778
                + + T ++   +      ++D     ++     A+ +  I+ + +  +   +PL  
Sbjct: 680  SSNKKLVFTNVNSIKVNNICMVNTDNYPNSLILATDTAIIIGVID-MEKKHHVRTIPLGE 738

Query: 779  TPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDEN 838
            +PRR   Q   K   II   +       +               +  GN   ++     +
Sbjct: 739  SPRRIAYQEASKTFGIITIKKNIKDEMIKGPVHPSASTRTQNITSAMGNRFLIDQHLSSS 798

Query: 839  KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHG 898
                   +    P+ E    +S + +L   +     + +L  NE A SI +    + +  
Sbjct: 799  SEASSLSDSDFNPEVE----ISSMIILHQDTFEILHVYQLYSNEYALSIISTKLAN-DPN 853

Query: 899  TLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLA 958
            T   +GTA  L     ++   G I ++ +      L  + +  V G   ++  F   L+A
Sbjct: 854  TYYVLGTA--LMTEECQDPKEGRIVVFHYDTSLSKLTQISEKIVYGGCFSMVTFHDMLIA 911

Query: 959  GIGPVLRLYDLG--KKRLLRKCENKLFPNTIVS-INTYRDRIYVGDIQESFHFCKYRRDE 1015
             +   ++LY     KK +LR  +N    N++   + T    I  GD+ +S    KY+ DE
Sbjct: 912  TVNSSVQLYIWTHEKKFVLRCTQNN---NSLSQHVKTNGKYILCGDLMKSLALFKYKTDE 968

Query: 1016 NQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY-FVRLPQDVSDEIEEDPTGGKIKW 1074
              L     D   +W +A   ID D   GA+    +Y F +    VS + +          
Sbjct: 969  PNLEKIVTDDCLKWSSAIEIIDDDLFIGAENDKYLYVFYKHSNFVSGDYQH--------- 1019

Query: 1075 EQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE-----------SVIYGTVMGSL 1123
                     N  +EI +FH+GD+V   +  SLV    E           S++YGT+ G+L
Sbjct: 1020 ---------NNFKEIGRFHLGDLVNVFRHGSLVMKQFENEYETQLSVQGSILYGTISGAL 1070

Query: 1124 G 1124
            G
Sbjct: 1071 G 1071


>gi|452824086|gb|EME31091.1| DNA damage-binding protein 1 isoform 2 [Galdieria sulphuraria]
          Length = 1150

 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 274/1293 (21%), Positives = 500/1293 (38%), Gaps = 232/1293 (17%)

Query: 1    MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
            MY Y +T  + + +  A  G+F      ++++ +   +E+    + G +  ++   I+G 
Sbjct: 1    MYNYVVTAHKASAVTHAAVGSFLSPNNRDLILGKCSRMEIYSLSSEGLVP-VIELPIYGR 59

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
            I  +   R     +D +   ++  +  +L +N      D I     G     RI      
Sbjct: 60   ISVMKLCRFPDDLQDSLFFLTEKYKFAVLRWNTQTGECDTIA----GGDVHDRI------ 109

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDC----GF 176
                   A  IG C+     + L+        I +  +    +  +  +  +D     G 
Sbjct: 110  --GHPTSAGHIGICDPSMTCFGLHLYDGLFKVIPTDFKKEAFNIRLEELDVLDIQFLYGH 167

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRK--WSEPVDNGANML 234
              P  A +  D             SE  ++L  Y + L          +   +++GA+ML
Sbjct: 168  SKPTIAVLYTD-------------SEENRHLKTYTVSLKDKDFGNGPLFQGNLESGASML 214

Query: 235  VTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL 294
            + VP       GV+V  +  V Y +         IP  A         I  A     K  
Sbjct: 215  IPVP---TPIGGVVVLGQETVTYISGSGLRGYHSIPVSAT--------IFRAYGRIDKDG 263

Query: 295  FFFLLQTEYGDIFKVTLEHDNE---------HVSELKIKYFDTIPVTASMCVLKSGYLFA 345
              +LL  E G ++ + LE              ++ LKI+      + +++  L +G+++ 
Sbjct: 264  TRYLLGDEKGILYLLVLEQSTSLSTFTETETKITGLKIQTLGETSLPSTIDYLDNGFVYI 323

Query: 346  ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
             S  G+  L +  +   +P  E  S         F  V            +E   +L PI
Sbjct: 324  GSCHGDSQLIRLLS---EPHPETGS---------FLEV------------METYPNLSPI 359

Query: 406  MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
            +D  + +   +   Q+ T  G     SLRI+R G+ + E A  ++PGV   ++++K++  
Sbjct: 360  VDFCVMDAERQGQGQVVTCSGAAKDGSLRIIRNGIGIHEQASVEVPGVKE-LFSLKRSSL 418

Query: 466  DEFDAYIVVSFNNATLVLSI--GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
                + +++SF + + VL +   E + E +   F    P+L    +  D ++Q+ PS  R
Sbjct: 419  SSQHSLLLLSFASESRVLELVSTELMAEANFPVFEMQEPTLYCGNVVGDCIVQITPSKAR 478

Query: 524  HIR-EDGRI-NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT-GQLLEVEKHEM 580
             I  ED  I NEW  P    I     N +Q++IA +GG LIYF++D    +++E     +
Sbjct: 479  LISCEDMSIVNEWHPPSGFRISVASGNSMQLIIATTGGNLIYFDIDANPKRIMEKSYKSL 538

Query: 581  SGDVACLDIASVPEGRKR-------SRFLAVGSYDN-TIRILSLDPDDCMQILSVQSVSS 632
              ++  LDI+ + +           S F+AVG +   +IR  SL   D +    +  +  
Sbjct: 539  EYEICSLDISPLGQAGMNLASQAIPSSFVAVGMWTEVSIRFYSLPSLDLIHTEKL-GLDV 597

Query: 633  PPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFL--- 689
               SLLF+ +       DG D+    FL A L +G L    +D  + + +DS  +FL   
Sbjct: 598  IARSLLFVTM-------DGEDY----FL-AALGDGRLLTYRLDK-SAKDTDSEKKFLYDQ 644

Query: 690  -----GLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHR----GRFLLTPLSYETLEYAASF 740
                 G +P  L          +     RP +  IH     G+ L + ++   +    SF
Sbjct: 645  RQMSIGTQPASLSIFETQNALHVFAACDRPTV--IHSSSGGGKLLCSNVNLREVTRVCSF 702

Query: 741  SSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQG 800
            SS+   + +  V   +L + T++ + +  +   +PL   PRR        +  ++ T Q 
Sbjct: 703  SSEAFPDCLALVTEGSLLLGTVDNI-QKLHIRTIPLGEQPRRIAHLDTHHVFAVLTTKQV 761

Query: 801  ALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVS 860
               +E+   A  E  E                                GY          
Sbjct: 762  VTISEDGNEALSETTEE-------------------------------GY---------- 780

Query: 861  CIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD----KEHGTLLAVGTAKGLQFWPKRN 916
             +R++D          +L+  E   S+ TVNF D    K++     VGTA      P+ +
Sbjct: 781  -VRLIDDTMMEIVHSYKLEQFETPCSVITVNFGDDAAAKDNQDYFVVGTAYSYADEPEPS 839

Query: 917  IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY-----DLGK 971
               G + ++   E+   L L+ +   +G   ++  F G++LA +  +L+L      + G 
Sbjct: 840  --RGRMLVFAVREQ--RLTLVAERTFKGALYSMDAFNGKILASVNSMLKLVRWSETESGA 895

Query: 972  KRLLRKC--ENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRW 1029
            + L  +C     +F   I+ I    D I +GD+  S     Y+     +   A D  P W
Sbjct: 896  RTLTEECTYHGSIF---ILQIKCLGDFILIGDLVRSVSLLAYKPMNGTIEDVARDIDPSW 952

Query: 1030 LTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEI 1089
            +T    +D D    A+   N++ ++   D S E E                   +++E++
Sbjct: 953  ITVIEMLDLDYYISAENCFNLFTLKRNSDASTEEER------------------SRLEKV 994

Query: 1090 VQFHVGDVVTSLQKASLV---PGGGESVI--------------------------YGTVM 1120
             ++H+G++V  ++   LV   P  G S++                           GT  
Sbjct: 995  GEYHLGELVNRIRHGRLVLQIPESGISILKSLLYGMYICFDDNLKELFMHKYRFNLGTAN 1054

Query: 1121 GSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFP-----VKDVIDGDL 1175
            G+LG + +   +    F   L+  + +    + G  H  +R           K+ +DGDL
Sbjct: 1055 GALGVIASIDEK-TFQFLHSLQTALNEVIKGVGGIQHEDWRRFTSERRIGDSKNFLDGDL 1113

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
             E+F  LS D    +A +++    E+ K++EE+
Sbjct: 1114 IERFLDLSRDKMELVAKKVNVPVEELAKQVEEL 1146


>gi|393905247|gb|EJD73911.1| CPSF A subunit region family protein [Loa loa]
          Length = 1145

 Score =  156 bits (395), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 275/1235 (22%), Positives = 491/1235 (39%), Gaps = 172/1235 (13%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y +T  +PT +  A+ G+F       +V+A+   +EL      G ++      +FG I +
Sbjct: 5    YIVTAYKPTVVTHALVGSFIVPTELNLVLAKTNRVELFLVTPEG-LKPHRECPVFGRIAT 63

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVD 123
            +  FR  G   D +++ +    + I+ + P+  +  +       + G R    G    V 
Sbjct: 64   IKLFRAPGEDVDSLLILTAKYHLAIIRWTPTSELRTRASGHIVDRVG-RPSETGMIATVH 122

Query: 124  PKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF----DNP 179
              G            +V+ L       +  +   +    +     +  ID  F    D P
Sbjct: 123  SSGL-----------MVFRLYDGLLKVVQWNEGKDLRGFNVRCDDLYIIDITFMSDPDRP 171

Query: 180  IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVP 238
              A I        QD  G+       N+   EL       S  W  + ++  A+M++ VP
Sbjct: 172  TLAYIY-------QDDNGRHIKVVTLNIEDKELS------SPLWKHDNLEGEASMVIGVP 218

Query: 239  GGGDGPSGVLVCAENFVIYKNQG-----------------HPDVRAVIPRRADLPAERGV 281
               +   G L+   + + Y   G                 HP+  A + R      +R +
Sbjct: 219  ---EPAGGCLIAGPDAISYHKGGDDALRYAGVPGSRLHNTHPNCYAPVDR----DGQRYL 271

Query: 282  LIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSG 341
            L   A       L+  LL+   G   +   E     V ++K++      +   MC L +G
Sbjct: 272  LADLAGN-----LYMLLLEFGKG---QEQDESSTVSVKDMKVESLGNTCIAECMCYLDNG 323

Query: 342  YLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR--GLKNLVRIEQV 399
              F  S FG+  L +                             +PR  G   +  ++  
Sbjct: 324  VCFIGSRFGDSQLIRLST--------------------------EPRADGTGYISLLDSY 357

Query: 400  ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
             +L PI DM +     ++  QI T  G     ++RI+R G+ + E+A  +L G+ + ++T
Sbjct: 358  TNLAPIRDMTVMRCNGQQ--QILTCSGAYKDGTIRIIRNGIGIEELASVELKGIKN-MFT 414

Query: 460  VKKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFL-DTTPSLAVSLIGDDSLMQV 517
            ++   + EFD Y+++SF++ T VL I GE +E+   +GF+ D     A  L    +++QV
Sbjct: 415  LRTR-DHEFDDYLILSFDSDTHVLLINGEELEDTQITGFVVDGATLWAGCLFQSTTILQV 473

Query: 518  HPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEK 577
                +  I  D  I  W+     T+V V     Q+VIA  G  LIY E D  G  L + +
Sbjct: 474  THGEVILIDGD-NIQIWKASKWITLVAVNEITGQLVIA-CGALLIYLEADSAGFKL-ISE 530

Query: 578  HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESL 637
             E   +++C+DI  +     RS   AVG + +    L   P    Q++ V     P + L
Sbjct: 531  LECEFEISCIDITPIGNETLRSEICAVGYWTDLSVALRTLP----QLMEVVREKIPGDML 586

Query: 638  LFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL- 696
                + + + G         ++L   L +G +    +DM TG L D +   LG +P  L 
Sbjct: 587  SRSIMLSPMEGH--------VYLLVALGDGTVHYFQIDMKTGALLDPKKATLGTQPIHLR 638

Query: 697  -FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGN 755
             F         +   S RP + Y    + L + ++   +       ++   + +V   GN
Sbjct: 639  KFRSRCSSVHNIFVCSDRPAVIYSSNQKLLFSNVNLRMVSTMTPLYAEAYPDALVLTDGN 698

Query: 756  ALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECF 815
            +L +  I+ + +    T +PL  +P R   QP        ET+  A+T E  E       
Sbjct: 699  SLVIGRIDDIQKLHIRT-VPLGESPSRIAYQP--------ETNTIAVTVERLEFVD---- 745

Query: 816  EAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKW-VSCIRVLDPRSANTTC 874
                MG++  G     +N  + +     S  +   P+  +++  VS I +LD  +     
Sbjct: 746  ---AMGKHHFGQCAS-KNAMETSSSRLSSMRREPTPECLAEEMEVSSILLLDSNTFEILH 801

Query: 875  LLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL 934
              EL+ +E A S+ +    +        VGTA  +    +  +  G I +++  E  + +
Sbjct: 802  SHELEGSEMAMSLASCQLGNDSQ-PYFVVGTAVIMSDETESKM--GRIMMFQASEGPERM 858

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR-KCENKLFPN-TIVSINT 992
             L+++ +++G   ++    G+L+  +   +RL++    + LR +C +  F N T + + T
Sbjct: 859  RLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELRLECSD--FDNVTALYLKT 916

Query: 993  YRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
              D I VGD+  S     Y+  E+     A D +  W++A   ID D+  GA+   N++ 
Sbjct: 917  KNDLILVGDLMRSLSLLSYKSVESTFEKVARDFMTNWMSACEIIDSDSFLGAENSYNLFT 976

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV----- 1107
            V     V D          +  E+G       +++E+  F++G++V      SL      
Sbjct: 977  V-----VKDSF-------TVFKEEG------TRLQELGLFYLGEMVNVFCHGSLTATQVD 1018

Query: 1108 --PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGR-DHMAYRSAY 1164
              P    S++YGT  G +G ++       +  F H       ++   C R  H  YR+  
Sbjct: 1019 VAPLYHSSILYGTSDGGIGVIVQMPPV--LYTFLHDVQKRLADYTENCMRISHTQYRTFE 1076

Query: 1165 FPVKD-----VIDGDLCEQFPTLSLDLQRKIADEL 1194
               +       IDGDL E    +  D   +I + L
Sbjct: 1077 TEKRSEVPNGFIDGDLIESLLDMGKDSVGQIVNGL 1111


>gi|294889072|ref|XP_002772683.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
 gi|239877121|gb|EER04499.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
          Length = 229

 Score =  156 bits (394), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/196 (44%), Positives = 116/196 (59%), Gaps = 12/196 (6%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK---------KNVNDEFDA 470
           QI+ L GRGPRS+LRILR GL + E   S+LPG P+A++T+K              E D 
Sbjct: 34  QIYALSGRGPRSALRILRHGLTLGEAGASELPGQPNALFTIKPFGASYAPVAEGEVESDR 93

Query: 471 YIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG 529
           YIVVSF + TL L +  + + EV+DSGF    P+L    + D S +QV P+GIRH+    
Sbjct: 94  YIVVSFVDQTLTLLVTSDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQVMPTGIRHVAAGR 153

Query: 530 RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV--DMTGQLLEVEKHEMSGDVACL 587
           R  EWR P  R +    SN  QVVIALSGGE+  FE+  D  G L EV K ++  +VA L
Sbjct: 154 RTTEWRAPPGRQVTMAASNGSQVVIALSGGEIQLFELDADTNGHLSEVAKRDIGCEVAAL 213

Query: 588 DIASVPEGRKRSRFLA 603
            +  +  GR RS+F+A
Sbjct: 214 TVQPLSSGRTRSQFMA 229


>gi|414883930|tpg|DAA59944.1| TPA: hypothetical protein ZEAMMB73_987949 [Zea mays]
          Length = 1355

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 203/920 (22%), Positives = 376/920 (40%), Gaps = 179/920 (19%)

Query: 389  GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVS 448
            G + L+    ++++ PI+D+ IA+   E+  Q+F  CG  P  SLR+LR G+ V  +  +
Sbjct: 466  GHRRLLHKSTIQNVAPILDLAIADYHGEKQDQMFACCGMSPEGSLRVLRNGVNVDRLLKT 525

Query: 449  Q--LPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLA 505
            +    GV + +WT++    D + +++V+SF   T +LS+G +  ++SD+ GF     +LA
Sbjct: 526  EAIYQGV-TGLWTLRMKATDAYHSFLVLSFVEETRILSVGLSFNDISDAVGFQPDVCTLA 584

Query: 506  VSLIGDDSLMQVHPSGIR------HIREDGR------INEWRTPGKRTIVKVGSNRLQVV 553
              L+ D+ L+Q++  G++      +   +G         +W      ++  VG N   VV
Sbjct: 585  CGLVADNLLVQIYSKGVKVCLPTVYAHPEGAPLTSPICTDWYPAITISVGAVGHN--IVV 642

Query: 554  IALSGGELIYF-----EVDMTGQLLEVEKHEMSGDVACLDI------------------- 589
            +A S    +Y            +L      ++  +V+C+ I                   
Sbjct: 643  VATSNPCCLYVLGVRSSSSYQYELYATHHVQLQYEVSCISIPQEDCIHDNVSFSCGEGDD 702

Query: 590  --ASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVS-----SPPESLLFLEV 642
               + P      +F  +G++  ++ I+SL+P + +++L++ +VS       P S    E 
Sbjct: 703  ICKNPPPKVNVCKFAVIGTHRPSVEIISLEPGEALRVLTIGTVSVNNALGAPMSGCIPEN 762

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFR---TVVDMVTGQLSDSRS------------- 686
               V  E         ++ AGL+NG+L R      D + G L    S             
Sbjct: 763  VRFVAAE-------RFYILAGLRNGMLLRFESETRDYLPGFLYKDSSIPSVNTFLQLISI 815

Query: 687  RFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCV 746
            R +G+ P  L  +     A ++ LS RPWL +  R     + +S+ +  +    SS  C 
Sbjct: 816  RRIGITPVLLVPIHDSANADIIVLSDRPWLLHAARHSLAYSSISFLSASHVTPVSSVDCP 875

Query: 747  EGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI------------ 794
             G++ VA + L +  +   G+  N     +  TPR+ +   + + +++            
Sbjct: 876  NGLLFVAESCLHLVELVH-GKRLNAQKFSIGGTPRKVLYHNESRTLLVLRTGLNGASSSS 934

Query: 795  ----IETDQGALTA----EEREAAKKECFEAAGMGEN--------GNGNMDQMENGDDEN 838
                ++   G L +    E  E AK  C + A +G +         +     M NG+ E+
Sbjct: 935  DVVQVDPQNGVLLSRYKCEPGETAK--CMQIAKIGNDQVLIVGTTKSAGRPMMSNGEAES 992

Query: 839  ---KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDK 895
               +   LS E    P+ ES  ++      +P S + +   E+           V +  +
Sbjct: 993  IKGRLIVLSLEAVESPR-ESSSFIPTFS-FNPSSHSGSPFHEI-----------VGYTTE 1039

Query: 896  EHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGR 955
            E  +     +                I   +   + +SL    +  + G  LALC +  R
Sbjct: 1040 EFSSNSMCSSPDEFS--------CNQIQAEQMTGQLRSLT---QYILNGAVLALCPYLDR 1088

Query: 956  -LLAGIGPVLRLYDLGKK--RLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
             +LA  G ++ ++    +    ++KC       TI  + T+  RI VGD ++   F  Y 
Sbjct: 1089 YVLAAAGNMIYVFGFTNENPHRIKKCAVGRTRFTITCLKTFASRIAVGDCRDGVLFYSYN 1148

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
                +L +   D   R +     ++ +T   +D+ G+I  +   +    E+ E P     
Sbjct: 1149 ESHRKLELVYSDPAHRLVGDIALLNCETAVVSDRRGSISVLSCTR---LEVSESP----- 1200

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL---VPGGGES----------VIYGTV 1119
                 + N A N       F++G+   S+QKA+    +P   ++          ++  T+
Sbjct: 1201 -----QKNLAVN-----CSFYMGETAMSIQKAAFRYRLPIDDDTDPVLETVYNCIVASTM 1250

Query: 1120 MGSLGAMLAFSSRDDVDFFSHLEMHMRQE----HP---PLCGRDHMAYRSAYFP--VKDV 1170
            +GSL  M+  SS +      H  +   QE    HP   P+ G DH  +R    P  V  +
Sbjct: 1251 LGSLFVMIPLSSEE------HQLLQDVQEKLSVHPLTAPVLGNDHAEFRQRGTPSVVPPI 1304

Query: 1171 IDGDLCEQFPTLSLDLQRKI 1190
            +DGD+  QF  L+ + Q+ I
Sbjct: 1305 LDGDMLVQFLELTGEQQQAI 1324



 Score = 46.6 bits (109), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 9/135 (6%)

Query: 12  TGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTG 71
           + ++    G F    + ++V+A+   LEL+   + G ++++   +IFG I+ +   +   
Sbjct: 47  SAVLHVAEGCFRSPDSADVVLAKETSLELVAVGDDGVLQSICEQDIFGIIKDIGVLQWHS 106

Query: 72  SQ---------KDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
                      KD +VV SDSG++ +L +    + F  I      K G  R   G+ LA+
Sbjct: 107 RHNGLIPQIECKDLLVVLSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHHLGRILAI 166

Query: 123 DPKGRAVMIGACEKQ 137
           D +   V + + E +
Sbjct: 167 DRESNFVAVSSYEDK 181


>gi|281208174|gb|EFA82352.1| UV-damaged DNA binding protein1 [Polysphondylium pallidum PN500]
          Length = 1054

 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 193/839 (23%), Positives = 361/839 (43%), Gaps = 112/839 (13%)

Query: 396  IEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPS 455
            I+Q  +L PI D  + ++ ++   Q+ T  G     SLRI+R G+ ++E A  +LPG+  
Sbjct: 305  IDQFTNLGPITDFCVVDVEKQGQGQLVTCSGTFQDGSLRIIRNGIGIAEQASIELPGIRG 364

Query: 456  AVWTVKKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAV-SLIGDDS 513
                   +       +++VSF N+T VL+  GE +EE   +GF     +L   +   ++ 
Sbjct: 365  LWSLSNNSNPSSLHRHLIVSFINSTKVLTFSGEEIEETEIAGFDSNATTLYCGNTTENNH 424

Query: 514  LMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQ 571
             +Q+  SGI  +      R++++ TP K +I     N  Q++I+  G  L Y E+  +  
Sbjct: 425  FIQIATSGIYLVDSSSLMRLDQY-TPEKGSINLASCNGSQILIS-QGSNLTYLEISDSKL 482

Query: 572  LLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLD--PDDCMQILSVQ 628
            +++ E  ++  +++CLDI S+ +G   S   AVG + D ++RIL L    + C + L  +
Sbjct: 483  IIKKEA-QLQYEISCLDI-SLLDGFTSSPVCAVGLWTDISVRILQLPNLNEVCKETLGGE 540

Query: 629  SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRF 688
             +   P S+LF+  + +             +L   L +G LF    D+V   L + +   
Sbjct: 541  IL---PRSILFITFEGTN------------YLLCSLGDGHLFNFTFDVVENLLQERKKLS 585

Query: 689  LGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEG 748
            LG  P  L S  V         S RP + Y +  + L + ++ + + +  SF+S+   + 
Sbjct: 586  LGTTPILLNSTNV------FASSDRPTVIYSNNKKLLYSAINMKVVSHVCSFNSEAFRDS 639

Query: 749  VVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEERE 808
            +     ++L + TI+ + +  +   +PL    RR     +     +I   +        +
Sbjct: 640  IAIATESSLVIGTIDEI-QKLHIRNVPLGEMARRITYVEEYHSYAVITIQRNDGNNNNND 698

Query: 809  AAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR 868
                      G+                     PL++    Y K           +L+ +
Sbjct: 699  NDNFNNNNNNGV---------------------PLTN----YVK-----------LLNEQ 722

Query: 869  SANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV 928
            +  TT    L+  E  +SI T  F + +    + VGTA   +   +++   G I ++R  
Sbjct: 723  TFETTSKYALKSFEFGWSIVTCRFKNDD-ALYVVVGTAFHNEVESQQS--KGRILVFRI- 778

Query: 929  EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLG-KKRLLRKCEN---KLFP 984
             E   L LL +  +      L  F GRLLAGI   ++ ++ G     L K E+       
Sbjct: 779  -EDNRLILLDEVALPACVYCLLPFNGRLLAGINKRVQAFNWGVDTNKLTKAESYSGHTLS 837

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
            +++VS   +   + V D+ +S         +  +   A + +P WL+    ID +T  G 
Sbjct: 838  HSMVSRGHF---VLVADLMKSMTLL-VEDQQGAIKELARNPLPIWLSRIEMIDDETFIGG 893

Query: 1045 DKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKA 1104
            D   N+  V+   + S EI+ +                   ++ + QFH+G+ +   +  
Sbjct: 894  DNSYNLIVVQKNAEASSEIDNE------------------LLDTVGQFHLGETINKFKHG 935

Query: 1105 SLVPGGG------ESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHM 1158
            SLV           ++++GTV G++G +++  S+DD +FF  L+  + +    + G    
Sbjct: 936  SLVTSPDMDSPKLPTILFGTVSGAIGVIVSI-SKDDYEFFEKLQKGLNRVVHGVGGLPFE 994

Query: 1159 AYRS-----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             +RS        P K+ IDGDL E F  L  D   +   +++ +  +  +++E + + I
Sbjct: 995  NWRSFSTEHMTIPSKNFIDGDLIETFLDLRHDKMLEAIKDMNISIEDTYRRIESLMHHI 1053



 Score = 46.2 bits (108), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIF 58
           MY +  T+Q+PT +  ++ G F+      +++++G  LE+  L PE    +  ++   I+
Sbjct: 1   MYNFVSTVQKPTAVYHSVTGCFTSPNERNLIISKGTKLEIFTLTPEG---LSPVLDVNIY 57

Query: 59  GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
           G I  +     TG ++D + + ++  +  IL +N        I       +  R    GQ
Sbjct: 58  GRISDMRILTATGDKQDRLFILTEKYKYCILAFNSESRELVTIATGDAEGTIGRPAEAGQ 117

Query: 119 YLAVDPKGRAVMIG 132
              VDP+ R  MIG
Sbjct: 118 IGIVDPECR--MIG 129


>gi|68059720|ref|XP_671834.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56488368|emb|CAI04007.1| hypothetical protein PB301481.00.0 [Plasmodium berghei]
          Length = 129

 Score =  155 bits (391), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/129 (51%), Positives = 98/129 (75%)

Query: 1085 KMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMH 1144
            +ME I+ FH+G++VTSLQK  L P   E +IY T+MG++GA + + ++++++   HLE+ 
Sbjct: 1    QMEHIMSFHIGEIVTSLQKVKLSPVSSECIIYSTIMGTIGAFIPYDNKEELELTQHLEII 60

Query: 1145 MRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            +R E   LCGR+H+ +RS Y PV+ VIDGDLCEQF +L  ++QRKI  +L++TP EIL+K
Sbjct: 61   LRTEKHALCGREHIFFRSYYHPVQHVIDGDLCEQFSSLPFEVQRKIGSDLEKTPDEILRK 120

Query: 1205 LEEIRNKIV 1213
            LE+IRNKI+
Sbjct: 121  LEDIRNKIL 129


>gi|413948669|gb|AFW81318.1| hypothetical protein ZEAMMB73_456332 [Zea mays]
          Length = 674

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 176/763 (23%), Positives = 325/763 (42%), Gaps = 123/763 (16%)

Query: 471  YIVVSFNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            Y+VVSF + T  L +++ + +EE    GF   T +L      +D L+QV  + +R +   
Sbjct: 2    YLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCT 61

Query: 529  GR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVAC 586
             R  +++W  P   ++    +N  QV++A  GG L+Y E+    +L+EV+  ++  +++C
Sbjct: 62   SRELVDQWNAPAGFSVNVASANASQVLLATGGGHLVYLEI-RDAKLVEVKHAQLEHEISC 120

Query: 587  LDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQ 643
            LD+  + E  + S   AVG + D ++RI SL PD  + ++  +++     P S+L   ++
Sbjct: 121  LDLNPIGEHLEYSSLAAVGMWTDISVRIFSL-PD--LVLIRKENLGGEIVPRSVLLCTLE 177

Query: 644  ASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG 703
                           +L   L +G LF  +++  TG+L+D +   LG +P  L +    G
Sbjct: 178  GVS------------YLLCALGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKG 225

Query: 704  RAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIE 763
               +   S RP + Y    + L + ++ + + +   F++    + +       L + TI+
Sbjct: 226  TTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTID 285

Query: 764  RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGEN 823
             + +    T +PL    RR   Q + K +                               
Sbjct: 286  DIQKLHIRT-IPLNEQARRICHQEQSKTLAFC---------------------------- 316

Query: 824  GNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEA 883
                                    + Y ++  +     IR+LD ++  + C+  L   E 
Sbjct: 317  -----------------------SFKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYEC 353

Query: 884  AFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNI-VAGYIHIYRFVEEGKSLELLHKTQV 942
              SI + +F D ++     VGTA  +   P+ N    G I ++  VE+G SL+L+ + + 
Sbjct: 354  GCSIISCSFVD-DNNVYYCVGTAYVI---PEENEPTKGRILVFA-VEDG-SLQLIVEKET 407

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDL-----GKKRLLRKCENKLFPNTIVSINTYRDRI 997
            +G   +L  F G+LLA I   ++LY       G   L  +C +      + +  T  D I
Sbjct: 408  KGAVYSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQSECGHHGHILALYT-QTRGDFI 466

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
             VGD+ +S     Y+ +E+ +   A D    W+TA   +D +   GA+   N++ VR   
Sbjct: 467  VVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKNS 526

Query: 1058 DVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP-------GG 1110
            D + + E                    K+E + ++H+G+ V   +  SLV        G 
Sbjct: 527  DAATDDER------------------AKLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGK 568

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY-----F 1165
              +VI+GT+ G +G ++A    D   F    +  + +    +    H  +RS +      
Sbjct: 569  IPTVIFGTINGVIG-IIASLPHDHYTFLEKFQSTLVKYIKGVGNMSHEQWRSFHNDKKTA 627

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
              ++ +DGDL E F    LDL R   + + +  G  ++ L +I
Sbjct: 628  EARNFLDGDLIESF----LDLSRSKMEVVSKAMGVSVEDLSKI 666


>gi|340714589|ref|XP_003395809.1| PREDICTED: DNA damage-binding protein 1-like [Bombus terrestris]
          Length = 1141

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 186/809 (22%), Positives = 341/809 (42%), Gaps = 96/809 (11%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
           Y +T  +PT + A + GNF+      +++A+   LE  L+ PE    +  L    I+G I
Sbjct: 8   YVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEG---LRPLKEVGIYGKI 64

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVPGQ 118
             +  FR    +KD + + +     +ILE      +  +  K H     + G +    G 
Sbjct: 65  AVVKFFRPPHEKKDLLFLLTTRYNAMILECIGEGENIEIITKAHGNVADRIG-KASETGI 123

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
              +DPK R + +   +    +  L++D       S  +E H+   + +       G  N
Sbjct: 124 KAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEEHQVQDVNFL-----HGCAN 178

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTV 237
           P    I        QD  G+     + +L   E       V   W  + V+  A +++ V
Sbjct: 179 PTLILIH-------QDINGRHVKTHEISLRDKEF------VKVPWRQDNVEREAMIVIPV 225

Query: 238 PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
           P       G ++  +  ++Y + G+  V AV+P     P  +   I   A    + L  +
Sbjct: 226 PS---PICGAIIIGQESILYHD-GNTYV-AVVP-----PIIKQSTITCYAKVDNQGL-RY 274

Query: 298 LLQTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
           LL    G +F + +E +      + V +LK++    I +   +  L +G +F  S FG+ 
Sbjct: 275 LLGDMAGHLFMLFVEQEKKPDGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRFGDS 334

Query: 353 ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
            L +        D   S    MET                        +L PI+DM + +
Sbjct: 335 QLVKLI---TKADENGSYCVPMET----------------------FTNLAPIIDMAVVD 369

Query: 413 LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
           L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +K      FD  +
Sbjct: 370 LERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGI-KGMWALKVG-GGNFDNTL 427

Query: 473 VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
           V+SF   T +L++ GE VEE    GF+    +     + +D  +Q+ P+  R I  + + 
Sbjct: 428 VLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISHETKT 487

Query: 531 -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
            ++EW    KRTI  V  N  QV+ A +G +L Y E+   GQ++      +  +VACLDI
Sbjct: 488 VVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYMEISY-GQIVPKGFATLQYEVACLDI 545

Query: 590 ASVPEGRKRSRFLAVGSYDN-TIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASV 646
           + + +G   ++  AVG + + ++RIL+L   + +  ++L  + +   P S+L    + + 
Sbjct: 546 SPL-DGHTEAKIAAVGLWTHISVRILTLPALEEINKELLGGEII---PRSILMTCFEGNT 601

Query: 647 GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
                       +L   L +G ++   +    G LSD +   LG +P  L +        
Sbjct: 602 ------------YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLFTTN 649

Query: 707 MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
           +   S RP + Y    + + + ++ + + +  S +++   + +     + + + TI+ + 
Sbjct: 650 VFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEI- 708

Query: 767 ETFNETALPLRYTPRRFVLQPKKKLMVII 795
           +  +   +PL  +PRR   Q   +   +I
Sbjct: 709 QKLHIRTVPLGESPRRIAYQESSQTFGVI 737



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 133/291 (45%), Gaps = 40/291 (13%)

Query: 920  GYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCE 979
            G I +Y +  +GK  ++  K +++G   +L +F G+LLA I   +RL++   ++ LR  E
Sbjct: 847  GRILLYHW-SDGKLTQVAEK-EIKGSCYSLTEFNGKLLASINSTVRLFEWTAEKELR-LE 903

Query: 980  NKLFPNTI-VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDF 1038
               F N I + + T  D I VGD+  S    +Y+  E      A D  P W+TA   +D 
Sbjct: 904  CSHFNNIIALYLKTKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPNWMTAIEILDD 963

Query: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
            DT  GA+   N++  +     + E E                    +M+E+ QFH+GD+V
Sbjct: 964  DTFLGAENCFNLFVCQKDSAATSEDER------------------QQMQEVGQFHLGDMV 1005

Query: 1099 TSLQKASLVPGG-GES-------VIYGTVMGSLG--AMLAFSSRDDVDFFSHLEMHMRQE 1148
               +  SLV    GES       V++GTV G++G    + F+     +F  +LE  +   
Sbjct: 1006 NVFRHGSLVMQNLGESSTPTQGCVLFGTVSGAIGLVTQIPFTF---YEFLRNLEERLTGV 1062

Query: 1149 HPPLCGRDHMAYRSAYFPVK-----DVIDGDLCEQFPTLSLDLQRKIADEL 1194
               +   +H  +RS    +K       IDGDL E F  LS +    +A  L
Sbjct: 1063 IKSVGKIEHNFWRSFNTELKIEQCEGFIDGDLIESFLDLSPNKMADVASGL 1113


>gi|308477185|ref|XP_003100807.1| CRE-DDB-1 protein [Caenorhabditis remanei]
 gi|308264619|gb|EFP08572.1| CRE-DDB-1 protein [Caenorhabditis remanei]
          Length = 1154

 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 283/1289 (21%), Positives = 522/1289 (40%), Gaps = 227/1289 (17%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVL--ELLRPENSGRIETLVSTEIFGAI 61
            Y ++ ++ + +  ++ GNF+G +   ++VARG  +  +L+ PE    ++ +    I+G +
Sbjct: 5    YCVSSKKASVVSESVVGNFTGHEHVNLIVARGNRIDVQLVSPEG---LKNVCEIPIYGQV 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLA 121
             ++A  R    ++  +VV ++  ++ +L Y   K +       T G              
Sbjct: 62   LTMALVRCKREKRQSLVVVTEKWQMAVLTYRDGKVI-----TRTAGA------------L 104

Query: 122  VDPKGRA---VMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
             D  GRA   +      +  LV +   + + ++    P    +S  +          FD 
Sbjct: 105  ADQSGRASDNLFSLTIHRSGLVAIRAYEGSVKMIQWEPGTDVRSFNV---------RFDY 155

Query: 179  PIFAAIELDYSEADQDSTGQAA----SEAQKNLTFYELDLG---LNHVSRKWSEPVDNGA 231
            P  +  +  + +   D T + A     +  K+L F +L++    L+  SR+ S   D  A
Sbjct: 156  PNVS--DFKFIDTGVDDTYRIAFIYDDDHGKHLQFSDLNMHDKELHTFSRQASIAAD--A 211

Query: 232  NMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRA-VIPRRADLPAERGVL----IVSA 286
            ++L+ VP      SGVLV A N ++YK+    DV   V+P  + L  +  V     +V  
Sbjct: 212  SVLIPVPAP---ISGVLVLAANSILYKSS---DVNGDVVPYASPL-LDNTVFTCHGLVDP 264

Query: 287  ATHRQKTLFFFLLQTEYGDIFKVTLE----HDNEHVSELKIKYFDTIPVTASMCVLKSGY 342
            +  R      F+L    G +  + L          V +++I+Y     +  S+  + +G 
Sbjct: 265  SGER------FILSDTEGRLLMLILNIGEGRSGITVKDMRIEYLGETSIADSINYIDAGV 318

Query: 343  LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            +F  S  G+  L +                LM T          P G    V +E   ++
Sbjct: 319  VFVGSRLGDSQLIR----------------LMPT----------PSGGSYSVVLETYSNI 352

Query: 403  MPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
             PI DM +     +   Q+ T  G     SLR++R G+ + E+A  +L GV   ++ ++ 
Sbjct: 353  GPIRDMIMVE--SDGQAQLVTCSGAEKDGSLRVIRNGIGIEELASVELAGVI-GIFPIR- 408

Query: 463  NVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSL-AVSLIGDDS---LMQV 517
             +N   D Y++VS    T VL I GE +E+V         P++ A ++ G D+   L+QV
Sbjct: 409  -LNSTTDNYVIVSLAEETHVLQINGEELEDVQLLQICTEMPTIFASTIFGPDNSEVLLQV 467

Query: 518  HPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV----DMTGQLL 573
                +R +   G    W  P    I KV  N +   I ++  + +YF +    +M G  +
Sbjct: 468  TEKHVRFMAFSGLSKIWEPPNGELISKVSVNAIHGQIVVAARDTVYFLLCVIEEMGGLDI 527

Query: 574  E-VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSV---QS 629
              V + +   ++ACLDI++  EG   ++         T  +L+L    CM+++ +   ++
Sbjct: 528  NLVAERKFEDEIACLDISN--EGDDHTK-------PGTFMVLALWSTFCMEVVQLPDLKT 578

Query: 630  VSSPPESLL--FLEVQASVGGEDGADH--PASL---------FLNAGLQNGVLFRTVVDM 676
            VS    SLL   L   + V   +      P S+         +L     +G L   V D+
Sbjct: 579  VSCERRSLLETVLSYLSQVCQTNLPSKIVPRSIVATCIEEVHYLLIAFGDGALVYYVFDI 638

Query: 677  VTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEY 736
             TG   +++   +G RPP L+ V    R  +   S RP + +    + + + ++ + +  
Sbjct: 639  KTGTHGEAKKSSVGTRPPTLYRVRNKNRQHLFVCSDRPVIIFSSSKKLVFSNVNVKVVNT 698

Query: 737  AASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIE 796
              S SS    + +V   G ++   T++ + +  +  ++P+  +  R   Q       +  
Sbjct: 699  VCSLSSSSYCDCLVISDGISMVFGTVDDI-QKIHVRSIPMGESVLRIAYQRSSGTYGVCS 757

Query: 797  TDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESD 856
            +         R  +K+E   A+      + +  ++ +  +E   +P        PK+   
Sbjct: 758  S---------RTESKRERIYASKNAIYTSNSRPKITSTRNEANDNP--------PKS--- 797

Query: 857  KWVSCIRVLDPRSANTTCLL--ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPK 914
               S   VLD  +   +      ++     FS  +  F + +      VGT  GL +  +
Sbjct: 798  --TSSFMVLDQNTFQRSGSFSNNIRKTYMIFSCISGQFTN-DSKVYYIVGT--GLIYPEE 852

Query: 915  RNIVAGYIHIYRFVE-EGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKR 973
             +   G I ++   E E   L  +H     G PLAL    G+L+A I   +RL++    +
Sbjct: 853  TDTKFGRIVVFEVDEVERSKLRRVHDLVCRGSPLALRILNGKLVAAINSSVRLFEWTMDK 912

Query: 974  LLR-KCENKLFPNTIVSIN--TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWL 1030
             LR +C N    N I++++     + + V D+  S     YR  E      A D    W+
Sbjct: 913  ELRLECSNF---NHIMALDLKVMNEEVAVADVMRSVSLLSYRMLEGNFEEVAKDWNSEWM 969

Query: 1031 TAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEED------PTGGKIKWEQGKLNGAPN 1084
                 I  + + G +   N++ V +  D S  I +D      PTG               
Sbjct: 970  VTCEFITAEQILGGEAHLNLFTVEV--DKSRPITDDGRYVLEPTG--------------- 1012

Query: 1085 KMEEIVQFHVGDVVTSLQKASLVPGG-------GESVIYGTVMGSLGAMLAFSSRDDVDF 1137
                   +++G++   + ++SLV           + +++GT  GS+G ++    +    F
Sbjct: 1013 ------YYYLGELPRVMVRSSLVAQPDDCSIQYSQPIMFGTNQGSIGMVVQIDDKWK-KF 1065

Query: 1138 FSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK-----DVIDGDLCEQFPTLSLDLQR---- 1188
               +E  +          +H  YRS  F  +       IDGDL E      LD+ R    
Sbjct: 1066 LIAVEKAIADSVKNCMHIEHTTYRSFIFQKRLESPTGFIDGDLVESI----LDMDRSAAI 1121

Query: 1189 ----KIADE-----LDRTPGEILKKLEEI 1208
                K++D+     L R P EILK +E++
Sbjct: 1122 AILYKVSDKGWDASLPRDPIEILKVIEDL 1150


>gi|384500266|gb|EIE90757.1| hypothetical protein RO3G_15468 [Rhizopus delemar RA 99-880]
          Length = 1057

 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 221/1005 (21%), Positives = 416/1005 (41%), Gaps = 168/1005 (16%)

Query: 228  DNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAA 287
            ++ A++L+ +P       GVL+ A  F+ Y     P + A+  R + + +     I++  
Sbjct: 192  ESDASLLIAMP---PAVGGVLLVASKFIRYLKPNQPPI-AIGIRSSTINSH---CIMNEE 244

Query: 288  THRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
              R       LL    G ++ + L   N+ V  L   Y  +I + + +  L +  +F  S
Sbjct: 245  GSR------VLLGDAEGLLYLLALNTTNQCVESLSFIYLGSISIPSCLAYLDNDIVFVGS 298

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
               +  L   Q             T  E+E+  Q              IE   +L PI D
Sbjct: 299  NLADSQLVYIQ------------RTTGESEDILQI-------------IETFANLGPITD 333

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
              +A+  +    Q+ T  G G   SLRI+R G+ ++E+A+  + GV   +W +      E
Sbjct: 334  FCVAD--KGGQTQVITCSGAGKEGSLRIIRNGVGLNELAMIPISGV-KGIWAL-----GE 385

Query: 468  FDAYIVVSFNNATLVLSIGE--TVEEVSDSGFLDTTP-SLAVSLIGDDSLMQVHPSGIRH 524
            +D  +++SF + T +L + +  T+ ++     +D    +L    + D  ++QV    +R 
Sbjct: 386  YD-LLLMSFVHQTRLLQLQKDHTIVQLDTFSAIDLNARTLVAGCVVDGMIIQVTDHSVRL 444

Query: 525  IREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV 584
            +     ++ W +    T+  V  N  Q VI+L  G+L+  +V +  +L  + +  +S ++
Sbjct: 445  MDTMSLLDVWSSDELITVASV--NPTQCVISLGFGKLVALQV-LNRKLNVIGETRLSFEI 501

Query: 585  ACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEV 642
            +C+DI  +   R  S F+A+G++++   +  L   D +Q ++ +S+     P S+L  + 
Sbjct: 502  SCIDIHPIG-SRTESAFVALGTWNSNTNVCLLSLSD-LQPIAQKSLGGTVVPRSILISQF 559

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG 702
            + +V            +L   L +G  +   +D ++GQLSD +  FLG  P  L +  + 
Sbjct: 560  ENTV------------YLLVALGDGQFYNFKLDSISGQLSDKKRTFLGKLPIHLSNFSLN 607

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            G   +   S +P + +    + + + ++ + +  A SF      + V  +    L +  +
Sbjct: 608  GVTHVFAASDKPSVVHSRNQKLVYSNVNLKEVRCATSFGCHAFPDAVALITKEGLIIGQM 667

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            E + +  + T +P   TPRR V Q   K   II          ER  +            
Sbjct: 668  EEI-QKLHITKIPTIDTPRRIVYQESTKSFGII---------TERMIS------------ 705

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
                           ++Y P S    G+             VLD +S      +  ++ E
Sbjct: 706  ---------------DRYRP-STVTGGF------------EVLDDQSFTVLDRIYFKEFE 737

Query: 883  AAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
               S+ +V F D  +   +    A G     K N   G I + +   + K L L+ + + 
Sbjct: 738  RPLSVTSVLFEDDPNEYYIV---ASG-----KENDGLGRILVLQLASDRK-LRLISQLKT 788

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDI 1002
             G+   +   +G+LLA I   L LY    +RL+ K  ++  P+    + T+ + I  GD+
Sbjct: 789  GGMIDCVRPIEGKLLASIQGTLYLYRWQSQRLV-KVSSRRLPSVTRCMTTHENFIMTGDL 847

Query: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDE 1062
              S    +Y R  +QL   A     + + A   ID + + GA++ G+++ +   Q   DE
Sbjct: 848  AYSVVMFQYDRQSDQLLEVAAHEKTKEVLAMKAIDSNLVIGAEREGHLFVLEHCQ---DE 904

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG--------GESV 1114
            +  D                   ++ I  +H+GDVV+  +  SL              S+
Sbjct: 905  VSADEP----------------LLDVISTWHLGDVVSRFRFGSLGMNNVDPDSSPIAPSL 948

Query: 1115 IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK-----D 1169
            I+ T  G++G ++A  S +       ++ +M +    +    H  +R+     +     +
Sbjct: 949  IFATASGAIG-VIADLSPERYKLLYQMQCNMCRVVKGIGELSHTDWRNVNIMYRKEEAMN 1007

Query: 1170 VIDGDLCEQFPTLSLDLQRKIAD------ELDRTPGEILKKLEEI 1208
             IDGDL E F  LS    + + D      +LD T  ++ K +EE+
Sbjct: 1008 FIDGDLIESFLDLSSQQMQNVVDGLHGGRKLDLTVEDLCKVVEEL 1052


>gi|313238818|emb|CBY20011.1| unnamed protein product [Oikopleura dioica]
 gi|313245836|emb|CBY34826.1| unnamed protein product [Oikopleura dioica]
          Length = 1135

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 251/1242 (20%), Positives = 500/1242 (40%), Gaps = 190/1242 (15%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y +T  + + +  ++ G F+      ++VA+   +E+     +G ++ +    ++G I  
Sbjct: 10   YVVTAHKQSAVTHSVVGQFTSAADLNLIVAKYSRIEVNLSTQTG-LKPVTEFNLYGRIAV 68

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNV---FDKIHQETFGKSGCRRIVPGQYL 120
            +  FR    +KD + + ++S    ILEY   K +   +  +  + +  S       G + 
Sbjct: 69   IEVFRYKNEKKDCLFILTESCYACILEYVDGKIITRAYGDMRDKNYSVSQ-----SGMHA 123

Query: 121  AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI 180
             VDP+ R + +   +   ++ ++N +++++   S+  E      +V  +C +    + P 
Sbjct: 124  CVDPEARCIALRLYDG--VLKIINLNSSSKHLTSA--EQRIEEILVVDMCFLHTA-NKPT 178

Query: 181  FAAIELDYSE-------ADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANM 233
             A +  D S           D++G  AS                H        V+    +
Sbjct: 179  LALLYDDNSSRHLSTIAITLDNSGSGASI---------------HKGPFRHTQVEQDTIL 223

Query: 234  LVTVPGGGDGPSGVLVCAENFVIY---KNQGHPDVRAVIPRRADLPAERGVLIVSAATHR 290
            +V VP   +  +G+L+     + Y   KN+    +  ++ R  +        +     HR
Sbjct: 224  IVAVP---EPLAGILLLGHVNITYHDSKNRSTCSIENIVKRTIEC-------VTPIDKHR 273

Query: 291  QKTLFFFLLQTEYGDIFKVTLEHDNEHVSE----LKIKYFDTIPVTASMCVLKSGYLFAA 346
                  +L     G++F + L+++   + E    L  KY     +  ++  + +  +F  
Sbjct: 274  ------YLCGDSNGELFLLLLDYNENRIPEERMRLATKYLGRTTLPNTLSYIDNYVVFVG 327

Query: 347  SEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIM 406
            S FG+  L + +              + +   G           ++   + Q ++L PI 
Sbjct: 328  STFGDSELIRIE--------------VSDNNSG-----------QHFTSLHQYDNLGPIK 362

Query: 407  DMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
            DM I +  ++   Q+ T  G G   SLRI+R G+ + E A   L GV   +W +K   + 
Sbjct: 363  DMCIVDFEKQGQGQLVTASGVGTGGSLRIIRNGVGIHEYASIDLEGV-KGLWALKYLSSS 421

Query: 467  EFDAYIVVSFNNATLVLSI-GETVEEVSD-SGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
                 +++SF   T+ L + G+ V EV +  GF +   ++    + D   +Q+    +R 
Sbjct: 422  TKQDSLLLSFVGQTIFLRLEGQDVTEVEEIPGFTNGEQTMYAGNVTDQQFLQITEKQVRL 481

Query: 525  IREDGRINEWRTPGKRTIVKVGS-NRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGD 583
            I ++     W  P + T + + S N+ QV++ + G   IY E++   +++E  +H    +
Sbjct: 482  IADESLKGSWE-PEENTQINLCSVNKNQVLLGV-GSTAIYLEIN-DCEIVEKSRHVFDSE 538

Query: 584  VACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLE 641
            +AC+DI+ + +    S F  +G ++ T+ +  L     M++++   +     P S+L   
Sbjct: 539  IACVDISPL-QKEMSSDFFTIGLWNVTVSVNKLPS---MEVIAKMELGGNIIPRSVLL-- 592

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRF-LGLRPPKLFSVV 700
                     G ++   L ++ G  +G LF   + +       S+ R  LG +P  L    
Sbjct: 593  ------NSFGENNTPYLLVSIG--DGALF--YIKLNEDHSFSSKKRIQLGTQPTSLNKFQ 642

Query: 701  VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVF 760
                + +   S RP + +    +   + ++ + + +     ++     +  V  NAL + 
Sbjct: 643  TSNGSTVFACSDRPAVIHSTNEKIFFSNVNLKQVNHMCVLDTEGYPNALALVNENALLIG 702

Query: 761  TIERLGETFNETALPLRYTPRRFVLQPKKKLMVII-ETDQGAL--TAEEREAAKK----- 812
             I+ + +  + + + L  TP   +   ++++   + E D+  L  T  ++E+ KK     
Sbjct: 703  KIDDI-QKLHTSTIRLNETPHSVLHYEEREVFAYLGEFDEEDLRDTRPDQESTKKLFTPL 761

Query: 813  --ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSA 870
              +C   +G+ E  + N   + +    N    + DE    P     KW     V +  S 
Sbjct: 762  SIQCPYKSGVVERDDSN--SLTHYTMVNTL-VICDEITFTP-----KWAHFFDVGEISSC 813

Query: 871  NTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEE 930
               C+ +L   +  F               + VGTA        +N   G I ++ + +E
Sbjct: 814  --MCIAKLGKKDEQF---------------IVVGTAITADEQECKN---GRICVFSYSKE 853

Query: 931  GKSLELLHKTQVEGIPLALCQFQG-RLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVS 989
             K L L+   QV G   ++    G +++  I   L+++++ ++  L+         T V+
Sbjct: 854  EK-LTLVSTKQVNGAVYSVKALNGNKIICAINQQLKVFEMNEQTTLQSEAPIANHITCVA 912

Query: 990  INTYRDR-IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
            ++  ++  I   D+  S     Y+  E  L   A D  P W+TA   ID D   GA+   
Sbjct: 913  VDVSKNGFILSADLMRSISVFSYKPLEGALEEIARDYHPNWMTAIKMIDDDNYIGAENSE 972

Query: 1049 NIYFVRLPQDVSDEIEED---PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKAS 1105
            NI+      +  DE +     PTG                      +HVG+ + ++ + +
Sbjct: 973  NIFICTRNTEAPDEEDRQQLLPTG---------------------YYHVGEHINTIVEGN 1011

Query: 1106 LVPG--------GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDH 1157
            LV             + + G+V G +G +LA        F S LE  MR+    +   DH
Sbjct: 1012 LVMDVHVESSITPTRTFLMGSVSGYVG-LLAIFPEKQWQFLSKLEAKMRKVIRGVGKIDH 1070

Query: 1158 MAYR-----SAYFPVKDVIDGDLCEQFPTLSLDLQRKIADEL 1194
             ++R     S     K  +DGDL E F  L  + Q+++  EL
Sbjct: 1071 ESWRRFESDSRMEDCKGFVDGDLIEMFQDLRPEKQKEVISEL 1112


>gi|350410909|ref|XP_003489174.1| PREDICTED: DNA damage-binding protein 1-like [Bombus impatiens]
          Length = 1141

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 185/809 (22%), Positives = 340/809 (42%), Gaps = 96/809 (11%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
           Y +T  +PT + A + GNF+      +++A+   LE  L+ PE    +  L    I+G I
Sbjct: 8   YVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEG---LRPLKEVGIYGKI 64

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVPGQ 118
             +  FR    +KD + + +     +ILE      +  +  K H     + G +    G 
Sbjct: 65  AVVKFFRPPHEKKDLLFLLTTRYNAMILECIGEGENIEIITKAHGNVADRIG-KASETGI 123

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
              +DPK R + +   +    +  L++D       S  +E H+   + +       G  N
Sbjct: 124 KAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEEHQVQDVNFL-----HGCAN 178

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTV 237
           P    I        QD  G+     + +L   E       V   W  + V+  A +++ V
Sbjct: 179 PTLILIH-------QDINGRHVKTHEISLRDKEF------VKVPWRQDNVEREAMIVIPV 225

Query: 238 PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
           P       G ++  +  ++Y + G+  V AV+P     P  +   I   A    + L  +
Sbjct: 226 PS---PICGAIIIGQESILYHD-GNTYV-AVVP-----PIIKQSTITCYAKVDNQGL-RY 274

Query: 298 LLQTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
           LL    G +F + +E +      + V +LK++    I +   +  L +G +F  S  G+ 
Sbjct: 275 LLGDMAGHLFMLFVEQEKKPDGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRLGDS 334

Query: 353 ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
            L +        D   S    MET                        +L PI+DM + +
Sbjct: 335 QLVKLI---TKADENGSYCVPMET----------------------FTNLAPIVDMAVVD 369

Query: 413 LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
           L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +K      FD  +
Sbjct: 370 LERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGI-KGMWALKVG-GGNFDNTL 427

Query: 473 VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
           V+SF   T +L++ GE VEE    GF+    +     + +D  +Q+ P+  R I  + + 
Sbjct: 428 VLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISHETKT 487

Query: 531 -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
            ++EW    KRTI  V  N  QV+ A +G +L Y E+   GQ++      +  +VACLDI
Sbjct: 488 VVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYMEIS-CGQIVPKGFATLQYEVACLDI 545

Query: 590 ASVPEGRKRSRFLAVGSYDN-TIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASV 646
           + + +G   ++  AVG + + ++RIL+L   + +  ++L  + +   P S+L    + + 
Sbjct: 546 SPL-DGHTEAKIAAVGLWTHISVRILTLPALEEINKELLGGEII---PRSILMTCFEGNT 601

Query: 647 GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
                       +L   L +G ++   +    G LSD +   LG +P  L +        
Sbjct: 602 ------------YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLFTTN 649

Query: 707 MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
           +   S RP + Y    + + + ++ + + +  S +++   + +     + + + TI+ + 
Sbjct: 650 VFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEI- 708

Query: 767 ETFNETALPLRYTPRRFVLQPKKKLMVII 795
           +  +   +PL  +PRR   Q   +   +I
Sbjct: 709 QKLHIRTVPLGESPRRIAYQESSQTFGVI 737



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 133/291 (45%), Gaps = 40/291 (13%)

Query: 920  GYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCE 979
            G I +Y +  +GK  ++  K +++G   +L +F G+LLA I   +RL++   ++ LR  E
Sbjct: 847  GRILLYHW-SDGKLTQVAEK-EIKGSCYSLTEFNGKLLASINSTVRLFEWTAEKELR-LE 903

Query: 980  NKLFPNTI-VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDF 1038
               F N I + + T  D I VGD+  S    +Y+  E      A D  P W+TA   +D 
Sbjct: 904  CSHFNNIIALYLKTKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPNWMTAIEILDD 963

Query: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
            DT  GA+   N++  +     + E E                    +M+E+ QFH+GD+V
Sbjct: 964  DTFLGAENCFNLFVCQKDSAATSEDER------------------QQMQEVGQFHLGDMV 1005

Query: 1099 TSLQKASLVPGG-GES-------VIYGTVMGSLG--AMLAFSSRDDVDFFSHLEMHMRQE 1148
               +  SLV    GES       V++GTV G++G    + F+     +F  +LE  +   
Sbjct: 1006 NVFRHGSLVMQNLGESSTPTQGCVLFGTVSGAIGLVTQIPFTFY---EFLRNLEERLTGV 1062

Query: 1149 HPPLCGRDHMAYRSAYFPVK-----DVIDGDLCEQFPTLSLDLQRKIADEL 1194
               +   +H  +RS    +K       IDGDL E F  LS +    +A  L
Sbjct: 1063 IKSVGKIEHNFWRSFNTELKIEQCEGFIDGDLIESFLDLSPNKMADVASGL 1113


>gi|47230701|emb|CAF99894.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 953

 Score =  151 bits (381), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 146/605 (24%), Positives = 255/605 (42%), Gaps = 79/605 (13%)

Query: 205 KNLTFYELDLGLNHVSR-KWS-EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +++  YE+ L     ++  W  E V+  A+M++ VP   +   G ++  +  + Y N   
Sbjct: 49  RHVKTYEVSLADKEFNKGPWKQENVEAEASMVIPVP---EPFGGAIIIGQESITYHNGDK 105

Query: 263 ------PDVRA---VIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEH 313
                 P ++    V   R D    R +L        +  LF  LL+ E        L  
Sbjct: 106 YLAIAPPTIKQSTIVCHNRVDPNGSRYLL-----GDMEGRLFMLLLEKE-------ELMD 153

Query: 314 DNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL------YQFQAIGADPDVE 367
               + +L ++      +   +  L +G +F  S  G+  L      +    +  D + +
Sbjct: 154 GTVALKDLHVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKVRVTHSLSELNVDSNDQ 213

Query: 368 ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGR 427
            S  T+MET                        +L PI+DM + +L  +   Q+ T  G 
Sbjct: 214 GSFVTVMET----------------------FTNLGPIVDMCVVDLERQGQGQLVTCSGA 251

Query: 428 GPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI-G 486
               SLRI+R G+ + E A   LPG+   +W ++     E D  +V+SF   T VL + G
Sbjct: 252 FKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSG 310

Query: 487 ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVK 544
           E VEE    GF+D   +     +  + L+Q+    +R + +D +  ++EWR P  R I  
Sbjct: 311 EEVEETELPGFVDNQQTFYCGNVAHNQLIQITSGSVRLVLQDSKALVSEWREPQGRNISV 370

Query: 545 VGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAV 604
              N  QVV+A+  G  +Y+   + G+L ++   EM  +VACLDI  + E    S   AV
Sbjct: 371 AACNHTQVVLAV--GRALYYLQILAGELKQISTTEMEHEVACLDITPLGEAGAESPLCAV 428

Query: 605 GSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGEDGADHPASLFLN 661
           G + D + R+L L    C   L  + +     P S+L    +             S +L 
Sbjct: 429 GLWTDISARVLKL---PCFTALHKEMLGGEIIPRSILMTTFE------------GSYYLL 473

Query: 662 AGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHR 721
             L +G LF   +D+ TG LS+ +   LG +P  L +      + +   S RP + Y   
Sbjct: 474 CALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSN 533

Query: 722 GRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPR 781
            + + + ++ + + Y    +S+   + +     + L + TI+ + +  +   +PL  +PR
Sbjct: 534 HKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEI-QKLHIRTVPLYESPR 592

Query: 782 RFVLQ 786
           R   Q
Sbjct: 593 RICYQ 597



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 115/297 (38%), Gaps = 60/297 (20%)

Query: 927  FVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVL-----------RLYDLGKKRLL 975
             V +  + E+LH  Q      AL     RL  G  P L           RLY+   ++ L
Sbjct: 662  LVVDQHTFEVLHAHQFLPSEYALSLVSCRL--GKDPSLQTIPNECVFQVRLYEWTAEKEL 719

Query: 976  RKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH 1035
            R   N       + + T  D I VGD+  S     Y+  E      A D  P W++A   
Sbjct: 720  RTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAIEI 779

Query: 1036 IDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVG 1095
            +D D   GA+   N++  +  +D +   +E+                   ++E+  FH+G
Sbjct: 780  LDDDNFLGAENAFNLFVCQ--KDSAATTDEER----------------QHLQEVGVFHLG 821

Query: 1096 DVVTSLQKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHL-EMHM 1145
            + V      SLV         P  G SV++GTV G +G + + S      ++S L ++  
Sbjct: 822  EFVNVFCHGSLVLQNLGETSTPTQG-SVLFGTVNGMIGLVTSLSE----GWYSLLLDLQN 876

Query: 1146 RQEHPPLCGRDHMAYRSAYFPVKD-----VIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            R     L       +RS +   K       IDGDL E F    LDL R    E+  T
Sbjct: 877  R-----LNKVIKTTWRSFHTERKTEQATGFIDGDLIESF----LDLGRAKMQEVVST 924


>gi|328788389|ref|XP_396048.3| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Apis
           mellifera]
          Length = 1141

 Score =  150 bits (379), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 185/809 (22%), Positives = 339/809 (41%), Gaps = 96/809 (11%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
           Y +T  +PT + A + GNF+      +++A+   LE  L+ PE    +  L    I+G I
Sbjct: 8   YVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEG---LRPLKEVGIYGKI 64

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVPGQ 118
             +  FR    +KD + + +     +ILE      +  +  K H     + G +    G 
Sbjct: 65  AVVKFFRPPHEKKDLLFLLTTRYNAMILECIGEGENIEIITKAHGNVADRIG-KASETGI 123

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
              +DPK R + +   +    +  L++D       S  +E H+   + +       G  N
Sbjct: 124 KAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEEHQVQDVNFL-----HGCAN 178

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTV 237
           P    I        QD  G+     + +L   E       V   W  + V+  A +++ V
Sbjct: 179 PTLILIH-------QDINGRHVKTHEISLRDKEF------VKIPWRQDNVEREAMIVIPV 225

Query: 238 PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
           P       G ++  +  ++Y + G+  V AV+P     P  +   I   A    + L  +
Sbjct: 226 PS---PICGAIIIGQESILYHD-GNTYV-AVVP-----PIIKQSTITCYAKVDNQGL-RY 274

Query: 298 LLQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
           LL    G +F + +E + +      V +LK++    I +   +  L +G +F  S  G+ 
Sbjct: 275 LLGDMAGHLFMLFVEQEKKADGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRLGDS 334

Query: 353 ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
            L +        D   S    MET                        +L PI+DM + +
Sbjct: 335 QLVKLI---TKADENGSYCVPMET----------------------FTNLAPIVDMAVVD 369

Query: 413 LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
           L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +K      FD  +
Sbjct: 370 LERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGI-KGMWALKIG-GGNFDNTL 427

Query: 473 VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
           V+SF   T +L++ GE VEE    GF+    +     + +D  +Q+ P+  R I  + + 
Sbjct: 428 VLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISYETKT 487

Query: 531 -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
            ++EW    KRTI  V  N  QV+ A +G +L Y E+   GQ+L      +  +VACLDI
Sbjct: 488 VVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYLEIS-CGQILPKGFTTLQYEVACLDI 545

Query: 590 ASVPEGRKRSRFLAVGSYDN-TIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASV 646
           + + +G   ++  AVG + + ++ IL+L   + +  ++L  + +   P S+L    + + 
Sbjct: 546 SPL-DGNTEAKIAAVGLWTHISVHILTLPALEEINKELLGGEII---PRSILMTCFEGNT 601

Query: 647 GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
                       +L   L +G ++   +    G LSD +   LG +P  L +        
Sbjct: 602 ------------YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLFTTN 649

Query: 707 MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
           +   S RP + Y    + + + ++ + + +  S +++   + +     + + + TI+ + 
Sbjct: 650 VFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEI- 708

Query: 767 ETFNETALPLRYTPRRFVLQPKKKLMVII 795
           +  +   +PL  +PRR   Q   +   +I
Sbjct: 709 QKLHIRTVPLGESPRRIAYQESSQTFGVI 737



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 132/289 (45%), Gaps = 36/289 (12%)

Query: 920  GYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCE 979
            G I +Y +  +GK  ++  K +++G   +L +F G+LLA I   +RL++   ++ LR  E
Sbjct: 847  GRILLYHW-SDGKLTQVAEK-EIKGSCYSLTEFNGKLLASINSTVRLFEWTAEKELR-LE 903

Query: 980  NKLFPNTI-VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDF 1038
               F N I + + +  D I VGD+  S    +Y+  E      A D  P W+TA   +D 
Sbjct: 904  CSHFNNIIALYLKSKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPNWMTAIEILDD 963

Query: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
            DT  GA+   N++  +     + E E                    +M+E+ QFH+GD+V
Sbjct: 964  DTFLGAENCFNLFVCQKDSAATSEDER------------------QQMQEVGQFHLGDMV 1005

Query: 1099 TSLQKASLVPGG-GES-------VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP 1150
               +  SLV    GES       V++GTV G++G +         +F  +LE  +     
Sbjct: 1006 NVFRHGSLVMQNLGESSTPTQGCVLFGTVSGAIGLVTQIPFI-FYEFLRNLEDRLTSVIK 1064

Query: 1151 PLCGRDHMAYRSAYFPVK-----DVIDGDLCEQFPTLSLDLQRKIADEL 1194
             +   +H  +RS    +K       IDGDL E F  LS D   ++A  L
Sbjct: 1065 SVGKIEHNFWRSFNTELKIEQCEGFIDGDLIESFLDLSPDKMAEVASGL 1113


>gi|380025901|ref|XP_003696702.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
           [Apis florea]
          Length = 1141

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 185/809 (22%), Positives = 339/809 (41%), Gaps = 96/809 (11%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
           Y +T  +PT + A + GNF+      +++A+   LE  L+ PE    +  L    I+G I
Sbjct: 8   YVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEG---LRPLKEVGIYGKI 64

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVPGQ 118
             +  FR    +KD + + +     +ILE      +  +  K H     + G +    G 
Sbjct: 65  AVVKFFRPPHEKKDLLFLLTTRYNAMILECIGEGENIEIITKAHGNVADRIG-KASETGI 123

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
              +DPK R + +   +    +  L++D       S  +E H+   + +       G  N
Sbjct: 124 KAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEEHQVQDVNFL-----HGCAN 178

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDNGANMLVTV 237
           P    I        QD  G+     + +L   E       V   W  + V+  A +++ V
Sbjct: 179 PTLILIH-------QDINGRHVKTHEISLRDKEF------VKIPWRQDNVEREAMIVIPV 225

Query: 238 PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
           P       G ++  +  ++Y + G+  V AV+P     P  +   I   A    + L  +
Sbjct: 226 PS---PICGAIIIGQESILYHD-GNTYV-AVVP-----PIIKQSTITCYAKVDNQGL-RY 274

Query: 298 LLQTEYGDIFKVTLEHDNEH-----VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
           LL    G +F + +E + +      V +LK++    I +   +  L +G +F  S  G+ 
Sbjct: 275 LLGDMAGHLFMLFVEQEKKTDGTQVVKDLKVELLGEISIPECITYLDNGVIFVGSRLGDS 334

Query: 353 ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN 412
            L +        D   S    MET                        +L PI+DM + +
Sbjct: 335 QLVKLI---TKADENGSYCVPMET----------------------FTNLAPIVDMAVVD 369

Query: 413 LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
           L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W +K      FD  +
Sbjct: 370 LERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGI-KGMWALKIG-GGNFDNTL 427

Query: 473 VVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR- 530
           V+SF   T +L++ GE VEE    GF+    +     + +D  +Q+ P+  R I  + + 
Sbjct: 428 VLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISYETKT 487

Query: 531 -INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDI 589
            ++EW    KRTI  V  N  QV+ A +G +L Y E+   GQ+L      +  +VACLDI
Sbjct: 488 VVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYLEIS-CGQILPKGFTTLQYEVACLDI 545

Query: 590 ASVPEGRKRSRFLAVGSYDN-TIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASV 646
           + + +G   ++  AVG + + ++ IL+L   + +  ++L  + +   P S+L    + + 
Sbjct: 546 SPL-DGNTEAKIAAVGLWTHISVHILTLPALEEINKELLGGEII---PRSILMTCFEGNT 601

Query: 647 GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAA 706
                       +L   L +G ++   +    G LSD +   LG +P  L +        
Sbjct: 602 ------------YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLFTTN 649

Query: 707 MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
           +   S RP + Y    + + + ++ + + +  S +++   + +     + + + TI+ + 
Sbjct: 650 VFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEI- 708

Query: 767 ETFNETALPLRYTPRRFVLQPKKKLMVII 795
           +  +   +PL  +PRR   Q   +   +I
Sbjct: 709 QKLHIRTVPLGESPRRIAYQESSQTFGVI 737



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 130/289 (44%), Gaps = 36/289 (12%)

Query: 920  GYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCE 979
            G I +Y +  +GK  ++  K + +G   +L +F G+LLA I   +RL++   ++ LR  E
Sbjct: 847  GRILLYHW-SDGKLTQVAEK-EXKGSCYSLTEFNGKLLASINSTVRLFEWTAEKELR-LE 903

Query: 980  NKLFPNTI-VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDF 1038
               F N I + + +  D I VGD+  S    +Y+  E      A D  P W+TA   +D 
Sbjct: 904  CSHFNNIIALYLKSKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPNWMTAIEILDD 963

Query: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
            DT  GA+   N++  +     + E E                    +M+E+ QFH+GD+V
Sbjct: 964  DTFLGAENCFNLFVCQKDSAATSEDER------------------QQMQEVGQFHLGDMV 1005

Query: 1099 TSLQKASLVPGG-GES-------VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP 1150
               +  SLV    GES       V+ GTV G++G +         +F  +LE  +     
Sbjct: 1006 NVFRHGSLVMQNLGESSTPTQGCVLXGTVSGAIGLVTQIPFI-FYEFLRNLEDRLTSVIK 1064

Query: 1151 PLCGRDHMAYRSAYFPVK-----DVIDGDLCEQFPTLSLDLQRKIADEL 1194
             +   +H  +RS    +K       IDGDL E F  LS D   ++A  L
Sbjct: 1065 SVGKIEHNFWRSFNTELKIEQCEGFIDGDLIESFLDLSPDKMAEVASGL 1113


>gi|383863765|ref|XP_003707350.1| PREDICTED: DNA damage-binding protein 1-like [Megachile rotundata]
          Length = 1138

 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 187/817 (22%), Positives = 343/817 (41%), Gaps = 112/817 (13%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAI 61
           Y +T  +PT + A + GNF+      +++A+   LE  L+ PE    +  L    I+G I
Sbjct: 8   YVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEG---LRPLKEVGIYGKI 64

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILE-----------YNPSKNVFDKIHQETFGKSG 110
             +  FR    +KD + + +     +ILE                NV D+I + +  ++G
Sbjct: 65  AVVKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEEIEIITKAHGNVADRIGKAS--ETG 122

Query: 111 CRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSIC 170
            + +       +DPK R + +   +    +  L++D       S  ++  +   + +   
Sbjct: 123 IKAV-------IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFL-- 173

Query: 171 GIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW-SEPVDN 229
               G  NP    I        QD  G+     + +L   E       V   W  + V+ 
Sbjct: 174 ---HGCANPTLILIH-------QDINGRHVKTHEISLRDKEF------VKIPWRQDNVER 217

Query: 230 GANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATH 289
            A M++ VP       G ++  +  ++Y + G   V AV+P     P  +   I   A  
Sbjct: 218 EATMVIPVPS---PICGAIIIGQESILYHD-GTTYV-AVVP-----PIIKQSTITCYAKV 267

Query: 290 RQKTLFFFLLQTEYGDIFKVTLEHD-----NEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
             + L  +LL    G +F + LE +      + V +LK++    I +   +  L +G +F
Sbjct: 268 DNQGL-RYLLGDMAGHLFMLFLEQEKNPDGTQVVKDLKVELLGEISIPECITYLDNGVIF 326

Query: 345 AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
             S  G+  L +   +    D   S    MET                        +L P
Sbjct: 327 VGSRLGDSQLIK---LITKADENGSYCVPMET----------------------FTNLAP 361

Query: 405 IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
           I+DM + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++   
Sbjct: 362 IVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGI-KGMWALRIG- 419

Query: 465 NDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
              FD  +V+SF   T +L++ GE VEE    GF+    +     + +D  +Q+ P+  R
Sbjct: 420 GGNFDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSAR 479

Query: 524 HIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMS 581
            I  + +  ++EW    KRTI  V  N  QV+ A +G +L Y E+   GQ++      + 
Sbjct: 480 LISHETKTVVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYMEIS-CGQIVPKGFATLQ 537

Query: 582 GDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLL 638
            +VACLDI+ + +G   ++  AVG + D ++RIL+L   + +  ++L  + +   P S+L
Sbjct: 538 YEVACLDISPL-DGNTEAKIAAVGLWTDISVRILTLPALEEINKELLGGEII---PRSIL 593

Query: 639 FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFS 698
               + +             +L   L +G ++   +    G LSD +   LG +P  L +
Sbjct: 594 MTCFEGNT------------YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRT 641

Query: 699 VVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
                   +   S RP + Y    + + + ++ + + +  S +++   + +     + + 
Sbjct: 642 FRSLSTINVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVT 701

Query: 759 VFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVII 795
           + TI+ + +    T +PL  +PRR   Q   +   +I
Sbjct: 702 IGTIDEIQKLHIRT-VPLGESPRRIAYQENSQTFGVI 737



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 40/291 (13%)

Query: 920  GYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCE 979
            G I +Y +  +GK  ++  K +++G   +L +F G+LLA I   +RL++   ++ LR  E
Sbjct: 844  GRILLYHW-NDGKLTQVAEK-EIKGSCYSLVEFNGKLLASINSTVRLFEWTAEKELR-LE 900

Query: 980  NKLFPNTI-VSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDF 1038
               F N I + + T  D + VGD+  S    +Y+  E      A D  P W+TA   +D 
Sbjct: 901  CSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTAVEILDD 960

Query: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
            DT  GA+   N++  +     + E E                    +M+EI QFH+GD+V
Sbjct: 961  DTFLGAENCFNLFVCQKDSAATSEDER------------------QQMQEIGQFHLGDMV 1002

Query: 1099 TSLQKASLVPGG-GES-------VIYGTVMGSLG--AMLAFSSRDDVDFFSHLEMHMRQE 1148
               +  SLV    GES       V++GTV G++G    + F+     +F  HLE  + + 
Sbjct: 1003 NVFRHGSLVMQNLGESSTPTQGCVLFGTVSGAIGLVTQIPFTF---YEFLRHLEYRLTEV 1059

Query: 1149 HPPLCGRDHMAYRSAYFPVK-----DVIDGDLCEQFPTLSLDLQRKIADEL 1194
               +   +H  +RS    +K       IDGDL E F  LS D   ++A +L
Sbjct: 1060 IKSVGKIEHRFWRSFNTELKVENCEGFIDGDLIESFLDLSPDKMAEVAVDL 1110


>gi|357111224|ref|XP_003557414.1| PREDICTED: DNA damage-binding protein 1-like [Brachypodium
            distachyon]
          Length = 1356

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 209/959 (21%), Positives = 394/959 (41%), Gaps = 218/959 (22%)

Query: 393  LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ--L 450
            LV    V+++ PI+D+ IA+   E+  Q+F+  G  P  SLR++R G+ V ++  ++   
Sbjct: 470  LVHKSSVQNVGPILDLAIADYHGEKQDQMFSCSGMCPEGSLRVIRNGINVEKLLRTEPIY 529

Query: 451  PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
             GV + +WT++    D + +++V++F   T +LS+G +  ++SD+ GF     +LA  LI
Sbjct: 530  QGV-TGLWTLRMKRTDMYHSFLVLAFVEETRILSVGLSFNDISDAVGFQPDVCTLACGLI 588

Query: 510  GDDSLMQVHPSGIR------HIREDGR------INEWRTPGKRTIVKVGSNRLQVVIA-- 555
             D  L+Q+H  G++      +   +G         +W      ++  VG N + V  +  
Sbjct: 589  ADGVLVQIHSKGVKLCLPTAYAHPEGAPLTSPVCVDWYPDVTISVGAVGHNIVAVATSNP 648

Query: 556  -----LSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPE--------------GR 596
                 LS   L  F+     +L E++  ++  +V+C+   S+PE              GR
Sbjct: 649  CCLYILSVRPLSSFQY----ELYEIQHVQLRYEVSCI---SIPEEDSRRSPVAVRRAFGR 701

Query: 597  -KRSR---------FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
             KR+          F  +G++  ++ ++SL+P +   +LS+ S+S          V  S 
Sbjct: 702  GKRNNLPAKVDVRMFAVIGTHKPSVEVISLEPGEAFMLLSIGSIS----------VNNSF 751

Query: 647  GGEDGADHPASL--------FLNAGLQNGVLFR------------------TVVDMVTGQ 680
            G       P S+        ++ AGL+NG+L R                  +    V   
Sbjct: 752  GAPVSGRIPESVRFVASERFYILAGLRNGMLLRFESETSEEHYLPDSFYKESSTHSVNTL 811

Query: 681  LSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF 740
            L     R +G+ P  L  +     + ++ LS R WL +  R     + +S+    +    
Sbjct: 812  LQLIAMRHIGITPVGLVPLSDSANSDIILLSDRSWLLHASRHSLAYSSISFLPASHVTPV 871

Query: 741  SSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET--- 797
            SS  C  G++ VA N L +  +   G+  N   L +  TPR+ +     + ++++ T   
Sbjct: 872  SSMDCPSGLLFVAENCLHLVEMVH-GKRLNAQKLSIEGTPRKVLYHSDSRTLLVMRTGLT 930

Query: 798  -------------DQGALTA----EEREAAKKECFEAAGMGE--------NGNGNMDQME 832
                         + G L +    E  E AK  C + A +G         + + +   M 
Sbjct: 931  GASCSSDIVQIDPNNGTLLSRFKCEPGETAK--CIQIAKIGNEQVLLVGTSKSTDRPMMP 988

Query: 833  NGDDEN---KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLEL----QDNEAAF 885
            NG+ E+   +   LS +  G P+ ES  +V    +    S++T    E+     +  ++ 
Sbjct: 989  NGEAESIKGRLIVLSLDTLGSPR-ESSSFVPTSNL--SSSSHTGSFPEIVGYATEEFSSN 1045

Query: 886  SICT----VNFHDKEHGTLLAVGTAKGLQFWP-KRNIVAGYIHIYRFVEEGKSLELLHKT 940
            S+C+    V ++  +H  +   G  + L        ++A Y ++ R+V            
Sbjct: 1046 SMCSSPDDVCYNQIQHEQM--AGHMRSLTHVTFAGAVLAVYPYLDRYV------------ 1091

Query: 941  QVEGIPLALCQFQGRLLAGIGP-VLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
             V     ALC F         P  ++ Y + + R            TI  + TY  RI  
Sbjct: 1092 -VAAAGNALCVFG---FVNENPHRMKKYAISRTRF-----------TITCLKTYASRIAA 1136

Query: 1000 GDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            GD ++   F  Y  +  +L +   D   R +     ++ +T   +D+ G+I  +  P+  
Sbjct: 1137 GDCRDGVLFYSYHENLRKLELIYADPAQRLVGDVALLNCETAVVSDRRGSISVLSCPR-- 1194

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL---VPGGGES--- 1113
              E+ E P                  +     F +G++  S+QKA+    +P   E+   
Sbjct: 1195 -LEVSESPE---------------KNLAVRCSFFMGEIAMSIQKAAFKYRLPIDDETDPV 1238

Query: 1114 -------VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQE---HP---PLCGRDHMAY 1160
                   V+  T++GS+  M+  +S +      HL   +++    HP   P+ G DH  +
Sbjct: 1239 LESAYNCVVASTLLGSVFVMIPLTSEEH-----HLLQDVQERLSLHPLTAPILGNDHAEF 1293

Query: 1161 RSAYFP--VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG--------EILKKLEEIR 1209
            R    P  +  ++DGD+  QF  L+ + Q+ + +++    G        ++++ LE + 
Sbjct: 1294 RRRGIPLGIPPILDGDMLVQFLELTGEQQQAVLNDMPSEKGPHRSISVFQVMRTLERLH 1352



 Score = 40.8 bits (94), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 12/164 (7%)

Query: 20  GNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLA----QFRLTG---- 71
           G+F      E+V+ +   LEL+   + G +++L     FG I+ +     +F+  G    
Sbjct: 65  GHFRSEHLSEVVLCKETSLELVVVGDDGVLQSLCEQSTFGIIKDVGVLDWRFKHFGIWPE 124

Query: 72  -SQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVM 130
              K+ +V+ SDSG++ +L +    + F  I      K G  R   G+ LA++     V 
Sbjct: 125 IEGKEILVLLSDSGKLSLLYFCCEMHRFIAIGNIELSKPGNMRDQLGRILAINQDSEWVA 184

Query: 131 IGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYS---ICG 171
           + A E +  +  + R           +E  K    VY    ICG
Sbjct: 185 VSAYEDEFAIVHVERSPHVYGPNKEIVEGAKISHAVYKTNDICG 228


>gi|308808936|ref|XP_003081778.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
 gi|116060244|emb|CAL56303.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
          Length = 1282

 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 259/1187 (21%), Positives = 464/1187 (39%), Gaps = 230/1187 (19%)

Query: 9    QQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFG--AIRSLAQ 66
             +PT +  +  G F+ ++  +++VA+   LE+ R  +SG +  ++   I+G  A  SL  
Sbjct: 234  HKPTVVTHSAVGRFTSSEETDLIVAKCTRLEIYRLSSSG-LRPIMDVPIYGRVATMSLCG 292

Query: 67   FRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGK---SGCRRIVPGQYLAVD 123
             R  GS+    +     G    L Y+      +++  E FG    +  R    GQ   VD
Sbjct: 293  GRERGSKGRLFITTERYG-FTALSYDEES---EELKTEAFGDVRDNIGRPAENGQIGIVD 348

Query: 124  PKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAA 183
               R++ +   +    V   +     +   +  LE  +   I +       G   P  A 
Sbjct: 349  EDCRSIGLQLYDGLFKVIPCDEKGKVKEAFNIRLEELRVEDIQFL-----HGTAKPTIAV 403

Query: 184  IELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE-PVDNGANMLVTVPGGGD 242
            +  D  EA    T +     ++             VS  W++  ++ G++ ++ VP    
Sbjct: 404  LYRDMKEAVHIKTYEIGVREKE------------FVSSPWAQNDLEGGSSKIIPVPAPVG 451

Query: 243  GPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTE 302
            G   +    E  ++Y N+   D   V  +  ++P ER  ++   A     + +  LL   
Sbjct: 452  GVVVL---GEETIVYLNKTSDDTD-VFLKAINIP-ERSSIVCYGAIDPDGSRY--LLGDH 504

Query: 303  YGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGA 362
             G ++ + L HD + V+ELKI+      + +++  L +G +F  S +G+  L +  +   
Sbjct: 505  DGTLYLLVLVHDGKRVNELKIERLGETSIPSTVSYLDNGVVFVGSAYGDSQLIKLHSEKT 564

Query: 363  DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIF 422
            + D + +                    L  +  +E+  +L PI+D    +L      Q+ 
Sbjct: 565  NVDKDGN--------------------LSYIQILEEFTNLGPIVDFAFVDLERHGQGQVV 604

Query: 423  TLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLV 482
            T  G     SLR++R G+ + E AV QLPGV   +++++ +   + D Y+VV+F N T +
Sbjct: 605  TCSGAYKDGSLRVVRNGIGIDEQAVIQLPGV-KGLFSLRDDDESQVDKYLVVTFINETRI 663

Query: 483  LSI----GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPG 538
            L      G+T++E   SGF     +L                                  
Sbjct: 664  LGFVGDEGDTLDETEISGFNAEAQTLCC-------------------------------- 691

Query: 539  KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
                     N L+     SGG+L      M G+L  V       ++ACLD   + E    
Sbjct: 692  --------GNMLE-----SGGKLHCLSA-MKGKLALVASATFEDEIACLDCTPMGEATS- 736

Query: 599  SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGEDGADHPA 656
            S   AVG +   I + S+     + ++  +S      P S L    ++            
Sbjct: 737  SPVCAVGLWSMEIVLASMSD---LSVIKRESTGEDIIPRSTLLCSFESIP---------- 783

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL--FSVVVGGRAAMLCLSSRP 714
              +L  GL +G L   ++D  +G+LS  +   LG +P  L  F        ++   S RP
Sbjct: 784  --YLLVGLGDGQLITYLLDEKSGELSVRKKLSLGTKPITLQTFKSHATNVHSVFAASDRP 841

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
             + + +  + + + ++ + + +   FSS    + +       L +  I+ + +    T +
Sbjct: 842  TVIFSNNKKLIYSNVNVQEVLHVCPFSSAAFPDALALAGEEDLTIGGIDDIQKLHIRT-I 900

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALTAEE-REAAKKECFEAAGMGENGNGNMDQMEN 833
            PL   PRR   QP        ET+  A+  E     + ++CF                  
Sbjct: 901  PLGGQPRRIAHQP--------ETNTFAVVVEHLWSKSSQDCF------------------ 934

Query: 834  GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFH 893
                                        +R++D  S  T    +L+D E   S+ +  F 
Sbjct: 935  ----------------------------VRLVDDGSFETLSQFQLEDQELTSSLTSCTFA 966

Query: 894  DKEHGTLLAVGTAKGLQF--WPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQ 951
              +  T   VGT   L+    P R    G I +++  ++   L L+ + +V G    L  
Sbjct: 967  -GDSTTYYVVGTGIALETEDEPSR----GRILVFKVDDD--QLVLVSEKEVRGAVYNLNA 1019

Query: 952  FQGRLLAGIGPVLRLYDLGKK-----RLLRKCENKLFPNTIVS--INTYRDRIYVGDIQE 1004
            F+G+LLAGI   L L+    +      L+ +C +      IV+  + T  D I VGD+ +
Sbjct: 1020 FKGKLLAGINSKLELFKWTPREDEVHELVSECSHH---GQIVTFAVKTRGDWILVGDLMK 1076

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD-TMAGADKFGNIYFV-RLPQDVSDE 1062
            S     Y+ +E  +   A D    W+TA   +D D T  GA+   N++ V R    V+DE
Sbjct: 1077 SMSLLLYKPEEGAIDEVARDFNANWMTAVAMLDDDETYLGAENSLNLFTVSRNVNAVTDE 1136

Query: 1063 IEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPG--GGES-----VI 1115
                                 +++E   ++H+G++V +    SLV     GES     ++
Sbjct: 1137 -------------------ERSRLEITGEYHLGELVNAFAPGSLVMSLRDGESLSVPTLL 1177

Query: 1116 YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
            +GT  G +G +LA   +D  +F   L+  + +    + G  H  +RS
Sbjct: 1178 FGTANGVIG-VLASLPKDVYEFTERLQASINKHIQGVGGLKHADWRS 1223


>gi|399949774|gb|AFP65431.1| splicing factor 3b subunit 3 [Chroomonas mesostigmatica CCMP1168]
          Length = 1156

 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 158/734 (21%), Positives = 309/734 (42%), Gaps = 65/734 (8%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
           MYL+     Q   +    +GN+S  K  ++++ RG V+ELL     +G++ TL    +F 
Sbjct: 1   MYLFFSVFHQGASVQGINSGNYSIFKREQLIIIRGTVIELLGTNLKTGKLTTLSYANLFR 60

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
              S+  FR     KD+  +  + G I +   + ++  F     +  G    +  +    
Sbjct: 61  FNISIISFRFKNKNKDFFSLLDNEGNITLFSVDKTQK-FILFSNKNIGNKNLKESLYPYL 119

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAAR-LTISSPLEAHKSHTIVYSICGIDCGFDN 178
            A++ K    MI A EK K  + + ++     +   + +E      I Y I   +    N
Sbjct: 120 AALNKKNLIYMICAVEKLKFSFFIGKNKFKNPVFFKNKMEIRHPSIICYHITTYEAKKRN 179

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVP 238
             F  IE  Y                K L FYE++   N + RK    +++ + +++ + 
Sbjct: 180 G-FLTIETCY-----------IRPYDKFLVFYEINFQYNIIKRKIIAKINSTSYLIIPLE 227

Query: 239 GGGDGPSGVLVCAENFVIYKNQGHPDVRAV-IPRRADLPAERGVLIVSAATHRQKTLFFF 297
                   +L+ +E+ V   N  + +     IP R          I S      K   F 
Sbjct: 228 NFITN-DFLLIFSESLVTMVNIENKNFFTRNIPFRKTKSKSSQTFISSYGVLSGKFNIFL 286

Query: 298 LLQTEYGDIFKVTLEHDNEHVS---ELKIKYFDTIP-VTASMCVLKSGYLFAASEFGNHA 353
           L+  + GD+ K+      + +    E+ I+YFDT+      + +LK+G+LFA+ + GNH 
Sbjct: 287 LIANQNGDLLKIYFNKPIQLIKTHREMFIEYFDTLLGKIRFLTLLKNGHLFASMDSGNHF 346

Query: 354 LYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR-GLKNLVRIEQVESLMPIMDMRIAN 412
            +QF ++G            +E ++     FF PR   +NL  I+++ S+ PI+      
Sbjct: 347 YFQFLSLGKKK---------IENQK-----FFYPRLNYRNLKIIDELSSMSPILSFDQLI 392

Query: 413 LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI 472
           L E+   ++F L G G  SS+R+L+    VS + + +   +P+ +  + K ++ +   Y+
Sbjct: 393 LPEQRITKLFLLSGTGSNSSVRLLQESCDVSLLGIKRFKLIPTGINIIGKEIDSK---YL 449

Query: 473 VVSFNNATLVLSIGETVEEVSDSGFL-DTTPSLAVSLIGDDSLMQVHPSGIRHI---RED 528
            +SF+  T    +G+ +EE++  GF+ D + S    +   + ++Q     IR I   ++ 
Sbjct: 450 FISFSIFTQCFLLGKNLEEINGDGFIYDESTSSIEKINFQNRILQFTFHKIRLIYFRKKK 509

Query: 529 GRINEWRTPGKRTIVKVGSNR---LQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVA 585
            +I EWR      I+     R   L + + LS G+ +  ++      +E+E  ++   + 
Sbjct: 510 RKIIEWRPLDGSAILDSAIFRIDSLNIFLILSNGKGVLIKIFKGRFFIELENIDLRYKIF 569

Query: 586 CLDIASVPEGRKRSR----FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLE 641
              +       K S      +     + ++RI S++  + M+++ +  +   PE+  F+ 
Sbjct: 570 -FSLFGTTYLHKSSEEWDLIILFSKKEKSLRIFSINKKNFMKLIGIHILPWTPETAKFIL 628

Query: 642 VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            +  +             L   L NG++  T  +   G++    ++ L   P  +     
Sbjct: 629 KKTKI------------ILLISLNNGMIMETEFNPKNGRIFQINAKILCFSPLYISKNFF 676

Query: 702 GGRAAMLCLSSRPW 715
            G+  +L   S+ W
Sbjct: 677 EGK--ILLFGSKIW 688


>gi|385305455|gb|EIF49426.1| nuclear mrna splicing [Dekkera bruxellensis AWRI1499]
          Length = 570

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 155/301 (51%), Gaps = 25/301 (8%)

Query: 362 ADPDVEASSS-----TLMETEEGFQPVF-------------FQPRGLKNLVRIEQVESLM 403
           A P++   +S     T+   + G QP+F             FQPR   NL  +  VE+L 
Sbjct: 4   ASPEISTYTSLRSWGTIRAKKCGAQPIFQTKIAAKTCEDAVFQPRQFVNLNLVYIVENLN 63

Query: 404 PIMDMRIANLFE-EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK 462
           P++D  I +     + P I +LCG   RSSL+IL   +  +E+   +LP    AV+    
Sbjct: 64  PVIDCTIHSSDNVTDLPVIISLCGSQSRSSLKILNHEIPYTEIVSQELPSKVEAVFAFAT 123

Query: 463 NVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
           + +D  D  I +SF + TL+L IGE VEE  ++GF     +LA + +G+ S++QV+  G 
Sbjct: 124 HADDXNDKLIALSFYDETLLLKIGEEVEEAENTGFKTDVATLAXAQLGNGSVVQVYADGX 183

Query: 523 RHI---REDGRIN--EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-E 576
           R I    +D  ++  +W+ P    ++    +  QVV+ALS  E+ YFEVD   +L+E  E
Sbjct: 184 RQIFYDDDDKPVDTVDWKAPVGIEVLHGAVSETQVVLALSSREIAYFEVDEQDRLIEYGE 243

Query: 577 KHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPES 636
           + E+   +  L +  +  G KR  F+  G  + T+ +L  DP   + ++S Q +SS P S
Sbjct: 244 RKELGSQITSLCLGELSGGHKRFPFIFAGGKNQTLTVLKTDPSSTLDVVSKQDLSSVPTS 303

Query: 637 L 637
           L
Sbjct: 304 L 304



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 82/214 (38%), Gaps = 46/214 (21%)

Query: 743 DQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVII-ETDQGA 801
           D    GV+++  N L + T+++L  +    ++PLRYTP+          MV I E D G 
Sbjct: 347 DVSXNGVLAIDXNTLYILTVDQLDSSLLIESIPLRYTPKAMADTINDNGMVYIAEADNGL 406

Query: 802 LTAEEREAAKKE-CFEAAGMGENGNGNMDQM----------------------------- 831
            +    E  K+E   E +      N + B                               
Sbjct: 407 RSPYVDEVKKEEKSDENSSXPXXXNZSXBSNDXXNSNDSXNSNXSXNSNXXXXXNEXXXS 466

Query: 832 ---------ENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
                    E  D++++Y     +Q+GYP  ES  W SCI+V    +      +EL  NE
Sbjct: 467 XXXDEIVLYETDDEKDEYY----QQFGYPHLES-SWASCIQVASFENKAVGQTIELL-NE 520

Query: 883 AAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN 916
           AAF +C+V F        L V T+    F P  N
Sbjct: 521 AAFKMCSVTFSSNLEQXFLVVATSVHQXFAPNXN 554


>gi|341884150|gb|EGT40085.1| CBN-DDB-1 protein [Caenorhabditis brenneri]
          Length = 1134

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 273/1270 (21%), Positives = 501/1270 (39%), Gaps = 209/1270 (16%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVL--ELLRPENSGRIETLVSTEIFGAI 61
            Y ++ ++ + ++ ++ GNF+G +   ++VARG  +  +L+ PE    ++ +    I+G +
Sbjct: 5    YCVSSKKASVVVDSVVGNFTGHENVNLIVARGNTIDVQLVSPEG---LKNVCQIPIYGQV 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLA 121
             SLA  +     +  +VV ++   + IL Y     V           +GC          
Sbjct: 62   LSLALVKAKRDSRQSLVVLTEKWHMSILAYRDGAIVTRA--------AGC---------I 104

Query: 122  VDPKGRAV---MIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            +DP GR V      +  +  L+ +   +   +L I     A   H         +  FD 
Sbjct: 105  LDPTGRTVDNFFTLSVHRSGLIAIKAFEGIVKL-IQWEAGADLRH--------FNVRFDF 155

Query: 179  PIFAAIELDYSEADQDSTGQAA----SEAQKNLTFYELDLGLNHVS---RKWSEPVDNGA 231
            P  +  E  + +  +D   +AA     +  K+L F +L++         R+ S   D  +
Sbjct: 156  PNVS--EFKFVDTTEDDVYRAAFIFEDDNGKHLQFSDLNMHDKEFRPHLRQTSIAAD--S 211

Query: 232  NMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQ 291
            +ML+ VP      SGV+V   + ++YK+  +     V+P  + L       I ++ +   
Sbjct: 212  SMLIPVPSP---ISGVVVLGTHSLLYKSSENDG--EVVPYSSPLLENT---IFTSHSIVD 263

Query: 292  KTLFFFLLQTEYGDIFKVTLEH-DNEH---VSELKIKYFDTIPVTASMCVLKSGYLFAAS 347
             T   F++    G +  + L   +N+    V E++I       V  S+  + +G +F  S
Sbjct: 264  PTGERFIVSDTDGRLLMLLLNAVENQSGLSVKEIRIDLLGDTSVAESINYIDNGVVFIGS 323

Query: 348  EFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
             FG+  L +  +       E ++S+ +   + +                    ++ PI D
Sbjct: 324  RFGDSQLIRLLS-------EKTNSSYISVLDTYY-------------------NIGPIRD 357

Query: 408  MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
            M +     +  PQ+ T  G     SLR++R G+ + E+A   LPGV   V      ++  
Sbjct: 358  MIMVE--SDGQPQLVTCSGAEKDGSLRVIRNGIGIEELATVDLPGV---VGIFPIRLDSS 412

Query: 468  FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG-----DDS--LMQVHPS 520
             D Y++VS    T VL I  T EE+ D  FL    +L     G     +DS  ++QV   
Sbjct: 413  ADNYVIVSLVEETHVLQI--TGEELEDVQFLQIDTALPTMFAGTLFGPNDSGLVVQVTER 470

Query: 521  GIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE---VDMTGQL--LEV 575
             +R +   G    W       I KV  N +   + ++  + +YF    VD  G L    +
Sbjct: 471  QVRLMSNGGLSKFWEPANGEMISKVAVNAVSGQVCVAARDHVYFLSCIVDEMGALDISVI 530

Query: 576  EKHEMSGDVACLDIASV-PEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSV--SS 632
             + +   ++ACLDI++   +  K + F+ +  +    R  S+   + +Q+  +++V  + 
Sbjct: 531  AEKQFEDEIACLDISNEGDDADKPATFMVLAFW----RTFSM---EVVQLPDLKTVCQTD 583

Query: 633  PPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLR 692
             P  ++   + A+   ED        +L     +G L   V D+ TG   + +   +G R
Sbjct: 584  LPSRIVPRSIIATC-IEDVH------YLLVAFGDGALTYYVFDIKTGTHGEPKKSSVGTR 636

Query: 693  PPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSV 752
            PP L  V    R  +   S RP + +    + + + ++ + +    S SS    + +V  
Sbjct: 637  PPSLHRVRNKNRQHLFVCSDRPMIIFSSSKKLVFSNVNVKVVNTVCSMSSRVYRDCLVIS 696

Query: 753  AGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK 812
             GN +   T++ + +    T +P+  +  R   Q       +  +     T  ER  A K
Sbjct: 697  DGNCMVFGTVDDIQKVHVRT-IPMGESVLRVAHQKSSGTYGVCSSRTD--TRFERITASK 753

Query: 813  ECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT 872
                 +          + M      N+  P              K  S   VLD  +   
Sbjct: 754  SAIGKSLSKPKVTATRNDM------NETPP--------------KSTSSFIVLDHNTFQV 793

Query: 873  TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK 932
                    +E A S+ +  F+D ++ +   VGTA  L +  +     G I ++   E  K
Sbjct: 794  LHSHTFGPHETAVSVISGQFND-DNNSYYIVGTA--LVYPDESETKIGRIIVFEVDETDK 850

Query: 933  S-LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSIN 991
            + L  + +  V G P+ +    G+L+A I   +R+++   ++ LR   +       V + 
Sbjct: 851  TKLRFMTEIVVRGAPMGIRILNGKLVAAINSSVRMFEWTAEKELRVECSTFNHIAAVDLK 910

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
               + I V D+  S     YR  E      A D    W+     I  +++ G +   N++
Sbjct: 911  VLNEEIAVADVMRSVSLLSYRTLEGNFEEVAKDWNSEWMVTCEFITAESILGGEAHLNMF 970

Query: 1052 FVRLPQDVSDEIEED------PTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKAS 1105
             V +  D S  + +D      PTG                      +++G++   + +A 
Sbjct: 971  TVEV--DKSRPVTDDGRYVLEPTG---------------------YWYLGELTKVMIRAV 1007

Query: 1106 LVPGGGES-------VIYGTVMGSLGAMLAFSSRDDV--DFFSHLEMHMRQEHPPLCGRD 1156
            LVP   ++       ++YGT  GSLG ++     DD+   F   +E  +          +
Sbjct: 1008 LVPQPDDNSIRYTQPIMYGTNQGSLGLVVQI---DDMYKKFLLSIEKAISDAEKNCMQIE 1064

Query: 1157 HMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADE-------------LDRTP 1198
            H  YRS  +     P    IDGDL E      LD+ R  A E             + + P
Sbjct: 1065 HSTYRSFTYNKRIEPPSGFIDGDLIESI----LDMDRSRAIEILEKANTKGWDPSIPKDP 1120

Query: 1199 GEILKKLEEI 1208
             EILK ++++
Sbjct: 1121 VEILKIIDDL 1130


>gi|395544366|ref|XP_003774082.1| PREDICTED: DNA damage-binding protein 1 [Sarcophilus harrisii]
          Length = 1239

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 163/746 (21%), Positives = 314/746 (42%), Gaps = 90/746 (12%)

Query: 486  GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIV 543
            GE VEE   +GF+D   +     +    L+Q+  + +R + ++ +  ++EW+ P  + I 
Sbjct: 539  GEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNIS 598

Query: 544  KVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLA 603
                N  QVV+A+  G  +Y+      +L ++   EM  +VACLDI  + +    S   A
Sbjct: 599  VASCNSSQVVVAV--GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGMSPLCA 656

Query: 604  VGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFL 660
            +G + D + RIL L   + +  ++L  + +   P S+L    ++S             +L
Sbjct: 657  IGLWTDISARILKLPSFELLHKEMLGGEII---PRSILMTTFESS------------HYL 701

Query: 661  NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIH 720
               L +G LF   + + TG LSD +   LG +P  L +        +   S RP + Y  
Sbjct: 702  LCALGDGALFYFGLSIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSS 761

Query: 721  RGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTP 780
              + + + ++ + + Y    +SD   + +     + L + TI+ + +  +   +PL  +P
Sbjct: 762  NHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI-QKLHIRTVPLYESP 820

Query: 781  RRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAAGMGENGNGNM---DQME 832
            R+   Q   +   ++ +     D    T   R +A  +   ++        +     +  
Sbjct: 821  RKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETS 880

Query: 833  NGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
             G++   ++ L  +Q+ +    + +++                     NE A S+ +   
Sbjct: 881  FGEEVEVHNLLIIDQHTFEVLHAHQFL--------------------QNEYALSLVSCKL 920

Query: 893  HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF 952
              K+  T   VGTA  + +  +     G I ++++  +GK L+ + + +V+G   ++ +F
Sbjct: 921  -GKDPNTYFIVGTA--MVYPEEAEPKQGRIVVFQY-SDGK-LQTVAEKEVKGAVYSMVEF 975

Query: 953  QGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
             G+LLA I   +RLY+   ++ LR   N       + + T  D I VGD+  S     Y+
Sbjct: 976  NGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYK 1035

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKI 1072
              E      A D  P W++A   +D D   GA+   N++  +  +D +   +E+      
Sbjct: 1036 PMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--KDSAATTDEE------ 1087

Query: 1073 KWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------PGGGESVIYGTVMGSL 1123
                         ++E+  FH+G+ V      SLV         P  G SV++GTV G +
Sbjct: 1088 ----------RQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQG-SVLFGTVNGMI 1136

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF-----PVKDVIDGDLCEQ 1178
            G + +  S    +    ++  + +    +   +H  +RS +      P    IDGDL E 
Sbjct: 1137 GLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIES 1195

Query: 1179 FPTLSLDLQRKIADELDRTPGEILKK 1204
            F  +S    +++   L    G  +K+
Sbjct: 1196 FLDISRPKMQEVVANLQYDDGSGMKR 1221



 Score = 50.1 bits (118), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 90/413 (21%), Positives = 151/413 (36%), Gaps = 79/413 (19%)

Query: 65  AQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH------QETFGKSGCRRIVPGQ 118
           A  R  G  KD + + +      ILEY  S    D I       Q+  G+     I+   
Sbjct: 70  APARQQGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG-- 127

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
              +DP+ R + +   +    V  L+RD       +  LE  +          ID  F  
Sbjct: 128 --IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQV---------IDVKF-- 174

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTV 237
            ++           QD  G+     + +L   E + G       W  E V+  A+M++ V
Sbjct: 175 -LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG------PWKQENVEAEASMVIAV 227

Query: 238 PGGGDGPSGVLVCAENFVIYKNQGH------PDVRA---VIPRRADLPAERGVLIVSAAT 288
           P   +   G ++  +  + Y N         P ++    V   R D    R +L      
Sbjct: 228 P---EPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLL-----G 279

Query: 289 HRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASE 348
             +  LF  LL+ E      VTL+       +L+++      +   +  L +G +F  S 
Sbjct: 280 DMEGRLFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFVGSR 332

Query: 349 FGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM 408
            G+  L +   +  D + + S    MET                        +L PI+DM
Sbjct: 333 LGDSQLVK---LNVDSNEQGSYVVAMET----------------------FTNLGPIVDM 367

Query: 409 RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK 461
            + +L  +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++
Sbjct: 368 CVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLR 419


>gi|449437538|ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 207/937 (22%), Positives = 373/937 (39%), Gaps = 202/937 (21%)

Query: 393  LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMA-VSQLP 451
            L+    ++++ PI+DM + +  +E+  Q+F  CG  P  SLRI+R G++V  +   S + 
Sbjct: 450  LIYANPIQNIAPILDMSVVDKHDEKQDQMFACCGMAPEGSLRIIRNGISVENLLRTSPIY 509

Query: 452  GVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLIG 510
               +++WT+K   +D + +Y+V+SF   T VLS+G +  +V+DS GF   T +LA  L+ 
Sbjct: 510  QGITSIWTIKMKRSDTYHSYLVLSFVEETRVLSVGLSFIDVTDSVGFQSDTCTLACGLLD 569

Query: 511  DDSLMQVHPSGIR-----HIREDGRINEWRTPGKRTI------VKVGSNRLQVVIALSGG 559
            D  ++Q+H + +R      I     I E  +P   +       + +G+    V++  +  
Sbjct: 570  DGLVIQIHQNAVRLCLPTKIAHSEGI-ELSSPACTSWFPDNIGISLGAVGHNVIVVSTSN 628

Query: 560  ELIYFEVDMTG------QLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRI 613
                F + +        ++ E +   +  +++C+ I      +K S F  + S +N+I  
Sbjct: 629  PCFLFILGVRKVSGYDYEIYEKQYLRLQYELSCISIPEKHFAKKESNF-PMNSVENSIMS 687

Query: 614  LSLDPDDCMQILSVQSVSSPPESLLF-----LEVQAS--------VGGEDGADHPASL-- 658
              L+   C  I+ + +     E L F     L V AS        +G       P  +  
Sbjct: 688  TLLNEVSCDTIIVIGTHRPSVEILSFVPSIGLTVLASGTISLMNILGNAVSGCIPQDVRL 747

Query: 659  ------FLNAGLQNGVLFR----------------TVVDMVTGQLSDSRS---------- 686
                  ++  GL+NG+L R                TVV  +    SDS S          
Sbjct: 748  VLVDRFYVLTGLRNGMLLRFEWPHTATMNSSDMPHTVVPFLLS-CSDSFSKEFHNADILE 806

Query: 687  ---------------RFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSY 731
                           R +G+ P  L  +     + ++ LS RPWL +  R     T +S+
Sbjct: 807  KHEDEIPSCLQLIAIRRIGITPVFLVPLTDRLDSDIIALSDRPWLLHSARHSLSYTSISF 866

Query: 732  ETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKL 791
            +   +     S  C  G++ VA ++L +  +    +  N     L  TPR+ +   + KL
Sbjct: 867  QPSTHVTPVCSADCPSGLLFVAESSLHLVEMVH-TKRLNVQKFHLGGTPRKVLYHSESKL 925

Query: 792  MVII------ETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKY--DPL 843
            ++++      +T    +   +  +          +GE G  +M+ + NG+++       L
Sbjct: 926  LLVMRTQLINDTSSSDICCVDPLSGSILSSHKLEIGETGK-SMELVRNGNEQVLVVGTSL 984

Query: 844  SDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAV 903
            S         E++     + VL        CL  +Q++            D    T  + 
Sbjct: 985  SSGPAIMASGEAESTKGRLIVL--------CLEHVQNS------------DTGSMTFCSK 1024

Query: 904  GTAKGLQFWPKRNIVAGYIH-------------------IYRFVEEGKSLELLHKTQVEG 944
                 LQ  P R IV GY                     I     E   L +++ T + G
Sbjct: 1025 AGLSSLQASPFREIV-GYATEQLSSSSLCSSPDDASSDGIKLEETEAWQLRVVYSTSLPG 1083

Query: 945  IPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCENKLFPNTIVSI 990
            + LA+C +  R  LA  G               ++ + +G+ R +           I S+
Sbjct: 1084 MVLAICPYLDRYFLASAGNAFYVCGFPNDSFQRVKRFAVGRTRFM-----------ITSL 1132

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
              + +RI VGD ++   F  Y+ D  +L     D   R +     +D DT   +D+ G+I
Sbjct: 1133 TAHVNRIAVGDCRDGILFFSYQEDAKKLEQIYSDPSQRLVADCTLLDVDTAVVSDRKGSI 1192

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPN-KMEEIVQFHVGDVVTSLQKASL--- 1106
              +      SD +E+              N +P   +     +++G++  +L+K S    
Sbjct: 1193 AIL----SCSDRLED--------------NASPECNLTLNCAYYMGEIAMTLRKGSFSYK 1234

Query: 1107 -----------VPGGGESVIYGTVMGS--LGAMLAFS--SRDDVDFFSHLEMHMRQEHP- 1150
                       VPG      + T++ S  LG+++ F+  SRD+ +    ++  +   HP 
Sbjct: 1235 LPADDLLRGCAVPGSDFDSSHNTIIASTLLGSIVIFTPLSRDEYELLEAVQAKL-AVHPL 1293

Query: 1151 --PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLS 1183
              P+ G DH  YRS   P  V  ++DGD+  QF  L+
Sbjct: 1294 TSPILGNDHYEYRSRENPIGVPKILDGDILTQFLELT 1330


>gi|294878269|ref|XP_002768335.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
 gi|239870597|gb|EER01053.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
          Length = 110

 Score =  141 bits (355), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/108 (57%), Positives = 83/108 (76%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
           + Y++TL + + +  A+ GNFS  K  EIVVARG  LELLRP+   R++T++S   FG I
Sbjct: 3   HFYNMTLSKTSAVTCAVYGNFSAPKAQEIVVARGSTLELLRPDEQNRLQTVISVNCFGLI 62

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKS 109
           RSL  FRL G+ +DY++VGSDSGRIVILEYN +KN+FDK+HQET+GK+
Sbjct: 63  RSLETFRLVGANRDYLLVGSDSGRIVILEYNTTKNIFDKVHQETYGKT 110


>gi|326519701|dbj|BAK00223.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1360

 Score =  141 bits (355), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 193/906 (21%), Positives = 361/906 (39%), Gaps = 150/906 (16%)

Query: 393  LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ--L 450
            LV    V+++ P++D+ IA+   E+  Q+F+ CG  P  SLR++R G+ V ++  ++   
Sbjct: 472  LVHKSTVQNVGPMLDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRTEPIY 531

Query: 451  PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
             G+ + +WT++    D + +++V++F   T +LS+G +  ++SD+ GF     +LA  LI
Sbjct: 532  QGI-TGLWTLRMKRTDTYHSFLVLAFVEETRILSVGLSFNDISDAVGFQPEVCTLACGLI 590

Query: 510  GDDSLMQVHPSGIR------HIREDGR------INEWRTPGKRTIVKVGSNRLQVVIALS 557
             D  L+Q+H  G++      +   +G         +W      ++  VG +   V +A S
Sbjct: 591  ADGLLVQIHSKGVKLCLPTSYAHPEGATLTSPVCVDWYPDVTISVGAVGHD--VVAVATS 648

Query: 558  GGELIYFE-----VDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR------------ 600
                +Y         +  +L E +  ++  +V+C+   S+PE   R R            
Sbjct: 649  NPCCLYILRVRPLSSLQYELYETQHVQLQYEVSCI---SIPEEDSRLRTPSSAIGGDFRE 705

Query: 601  --------------FLAVGSYDNTIRILSLDPDDCMQILSVQSVS-----SPPESLLFLE 641
                          F  +G++  ++ ++SL+PD+  ++LS  S+S       P S    E
Sbjct: 706  RKGNNSVAEVNVRMFAVIGTHKPSVEVISLEPDEAFRLLSTGSISVNNALGAPVSGCIPE 765

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFR------------------TVVDMVTGQLSD 683
                V  E         ++ AGL+NG+L R                  +    +   L  
Sbjct: 766  NVRVVASE-------RFYILAGLRNGMLLRFESGTSKDQYLPGSFYKESFAPSLNTLLQL 818

Query: 684  SRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSD 743
               R +G+ P  L  +     + ++ LS R WL +  R     + +S+    +    SS 
Sbjct: 819  VAIRHIGITPVGLVPLRDSANSDIIVLSDRSWLLHASRHSLAYSSISFLPASHVIPVSSV 878

Query: 744  QCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLM----------- 792
             C  G++ VA N L +  +   G+  N     +  TPR+ +     + +           
Sbjct: 879  DCPSGLLFVAENCLHLVEMVH-GKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRTGLTGAS 937

Query: 793  -----VIIETDQGALTA----EEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPL 843
                 V I+ + G L +    E  E AK  C + A +G         +  G  ++   P+
Sbjct: 938  CSSDIVQIDPNNGILLSRFKCELGETAK--CIQIAKIGSE-----QVLIVGTSKSIDRPM 990

Query: 844  SDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEH-GTLLA 902
                   P  E++     + VL   +  +        +E +  I T N     H G+   
Sbjct: 991  ------MPNGEAEGIKGRLIVLSLDTLGSP-------HECSSFIPTSNLSSSSHTGSFPE 1037

Query: 903  VGTAKGLQFWPKRNIVAGYIHIY---RFVEEGKSLELLHKTQVEGIPLALCQFQGR-LLA 958
            +      +F       +     Y   +F +   +L  L      G  LA+  +  R +LA
Sbjct: 1038 IVGCANEEFSSNSMCSSPDDICYNQIQFEQIAGNLRSLTHVTFTGAVLAVYPYLDRYVLA 1097

Query: 959  GIGPVLRLYDLGKK--RLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN 1016
              G  L ++    +    ++K        TI  + TY  +I  GD ++   F  Y  +  
Sbjct: 1098 AAGNTLSVFGFVNENPHRMKKYAVSRTRFTITCLKTYASQIAAGDCRDGVLFYSYHENLR 1157

Query: 1017 QLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQ 1076
            +L +   D   R +     +D +T   +D+ G+I  +  P     E  E     +  +  
Sbjct: 1158 KLELVYADPAQRLVGDVVLLDCETAVVSDRCGSISVLSCPGLEVSESPEKNLAVQCSFFM 1217

Query: 1077 GKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
            G++  +  K     +  +GD     +   ++      V+  T++GS+  M+  +S +   
Sbjct: 1218 GEIAMSIQKAAFKYRLSIGD-----ETDPVLESAYNCVVASTLLGSVFVMIPLTSEE--- 1269

Query: 1137 FFSHLEMHMRQE----HP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLSLDLQ 1187
               H  +   QE    HP   P+ G DH  +R    P  V  ++DGD+  QF  L+ + Q
Sbjct: 1270 ---HQLLQDVQERLSLHPLTAPILGNDHAEFRRRGIPSGVPSILDGDMLVQFLELTSEQQ 1326

Query: 1188 RKIADE 1193
            + + D+
Sbjct: 1327 QTVIDD 1332



 Score = 44.7 bits (104), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 39/233 (16%)

Query: 20  GNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLA----QFRLTG---- 71
           G+F      EIV+ +G  LEL+     G ++++     FG ++ +     +F+  G    
Sbjct: 67  GHFRSEHLWEIVLCKGTSLELVVVGEDGVLQSICEQSTFGIVKDVGVLDWRFKHFGIWPE 126

Query: 72  -SQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVM 130
              K+ +V+ SDSG++ +L +    + F  I      K G  R   G+ LA+D     V 
Sbjct: 127 IEGKEILVLLSDSGKLSLLYFCCQMHRFIPIGNIELSKPGNTRDQLGRILAIDHDSAWVA 186

Query: 131 IGACE---------KQKLVYVLNRDTAARL-TISSPLEAHKSHTIVYSICGI--DCGFDN 178
           I A E         + + VY  N++   +   I +  +A      V+S+C +   C  D 
Sbjct: 187 ISAYEDAFAVVRVGRTQHVYGPNKEIVEKTKIIHAVYKASDIRGTVWSMCFMRTRCSMDE 246

Query: 179 --PIFAAIELDYSEADQDSTGQAASEAQKNLTFYEL---DLGLNHVSRKWSEP 226
             P+ A I             +  S+A  +L+ Y L   D G+ ++S  +SEP
Sbjct: 247 YYPVVAMI-----------INRKGSDA-NDLSMYALAANDGGIQYLS-SYSEP 286


>gi|326510951|dbj|BAJ91823.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1360

 Score =  140 bits (354), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 194/913 (21%), Positives = 368/913 (40%), Gaps = 164/913 (17%)

Query: 393  LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ--L 450
            LV    V+++ P++D+ IA+   E+  Q+F+ CG  P  SLR++R G+ V ++  ++   
Sbjct: 472  LVHKSTVQNVGPMLDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRTEPIY 531

Query: 451  PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
             G+ + +WT++    D + +++V++F   T +LS+G +  ++SD+ GF     +LA  LI
Sbjct: 532  QGI-TGLWTLRMKRTDTYHSFLVLAFVEETRILSVGLSFNDISDAVGFQPEVCTLACGLI 590

Query: 510  GDDSLMQVHPSGIR------HIREDGR------INEWRTPGKRTIVKVGSNRLQVVIALS 557
             D  L+Q+H  G++      +   +G         +W      ++  VG +   V +A S
Sbjct: 591  ADGLLVQIHSKGVKLCLPTSYAHPEGATLTSPVCVDWYPDVTISVGAVGHD--VVAVATS 648

Query: 558  GGELIYFE-----VDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR------------ 600
                +Y         +  +L E +  ++  +V+C+   S+PE   R R            
Sbjct: 649  NPCCLYILRVRPLSSLQYELYETQHVQLQYEVSCI---SIPEEDSRLRTPSSAIGGDFRE 705

Query: 601  --------------FLAVGSYDNTIRILSLDPDDCMQILSVQSVS-----SPPESLLFLE 641
                          F  +G++  ++ ++SL+PD+  ++LS  S+S       P S    E
Sbjct: 706  RKGNNSVAEVNVRMFAVIGTHKPSVEVISLEPDEAFRLLSTGSISVNNALGAPVSGCIPE 765

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFR------------------TVVDMVTGQLSD 683
                V  E         ++ AGL+NG+L R                  +    +   L  
Sbjct: 766  NVRVVASE-------RFYILAGLRNGMLLRFESGTSKDQYLPGSFYKESFAPSLNTLLQL 818

Query: 684  SRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSD 743
               R +G+ P  L  +     + ++ LS R WL +  R     + +S+    +    SS 
Sbjct: 819  VAIRHIGITPVGLVPLRDSANSDIIVLSDRSWLLHASRHSLAYSSISFLPASHVIPVSSV 878

Query: 744  QCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLM----------- 792
             C  G++ VA N L +  +   G+  N     +  TPR+ +     + +           
Sbjct: 879  DCPSGLLFVAENCLHLVEMVH-GKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRTGLTGAS 937

Query: 793  -----VIIETDQGALTA----EEREAAKKECFEAAGMGE------NGNGNMDQ--MENGD 835
                 V I+ + G L +    E  E AK  C + A +G         + ++D+  M NG+
Sbjct: 938  CSSDIVQIDPNNGILLSRFKCELGETAK--CIQIAKIGSEQVLIVGTSKSIDRPMMPNGE 995

Query: 836  DEN---KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
             E    +   LS +  G P  E   ++    +    S++T    E+           V +
Sbjct: 996  AEGIKGRLIVLSLDTLGSPH-ECSSFIPTSNL--SSSSHTGSFPEI-----------VGY 1041

Query: 893  HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF 952
             ++E  +     +   + +           +  +F +   +L  L      G  LA+  +
Sbjct: 1042 ANEEFSSNSMCSSPDDICY-----------NQIQFEQIAGNLRSLTHVTFTGAVLAVYPY 1090

Query: 953  QGR-LLAGIGPVLRLYDLGKK--RLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFC 1009
              R +LA  G  L ++    +    ++K        TI  + TY  +I  GD ++   F 
Sbjct: 1091 LDRYVLAAAGNTLSVFGFVNENPHRMKKYAVSRTRFTITCLKTYASQIAAGDCRDGVLFY 1150

Query: 1010 KYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTG 1069
             Y  +  +L +   D   R +     +D +T   +D+ G+I  +  P     E  E    
Sbjct: 1151 SYHENLRKLELVYADPAQRLVGDVVLLDCETAVVSDRCGSISVLSCPGLEVSESPEKNLA 1210

Query: 1070 GKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAF 1129
             +  +  G++  +  K     +  +GD     +   ++      V+  T++GS+  M+  
Sbjct: 1211 VQCSFFMGEIAMSIQKAAFKYRLSIGD-----ETDPVLESAYNCVVASTLLGSVFVMIPL 1265

Query: 1130 SSRDDVDFFSHLEMHMRQE----HP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFP 1180
            +S +      H  +   QE    HP   P+ G DH  +R    P  V  ++DGD+  QF 
Sbjct: 1266 TSEE------HQLLQDVQERLSLHPLTAPILGNDHAEFRRRGIPSGVPSILDGDMLVQFL 1319

Query: 1181 TLSLDLQRKIADE 1193
             L+ + Q+ + D+
Sbjct: 1320 ELTSEQQQTVIDD 1332



 Score = 44.3 bits (103), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 39/233 (16%)

Query: 20  GNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLA----QFRLTG---- 71
           G+F      EIV+ +G  LEL+     G ++++     FG ++ +     +F+  G    
Sbjct: 67  GHFRSEHLWEIVLCKGTSLELVVVGEDGVLQSICEQSTFGIVKDVGVLDWRFKHFGIWPE 126

Query: 72  -SQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVM 130
              K+ +V+ SDSG++ +L +    + F  I      K G  R   G+ LA+D     V 
Sbjct: 127 IEGKEILVLLSDSGKLSLLYFCCQMHRFIPIGNIELSKPGNTRDQLGRILAIDHDSAWVA 186

Query: 131 IGACE---------KQKLVYVLNRDTAARL-TISSPLEAHKSHTIVYSICGI--DCGFDN 178
           I A E         + + VY  N++   +   I +  +A      V+S+C +   C  D 
Sbjct: 187 ISAYEDAFAVVRVGRTQHVYGPNKEIVEKAKIIHAVYKASDIRGTVWSMCFMRTRCSMDE 246

Query: 179 --PIFAAIELDYSEADQDSTGQAASEAQKNLTFYEL---DLGLNHVSRKWSEP 226
             P+ A I             +  S+A  +L+ Y L   D G+ ++S  +SEP
Sbjct: 247 YYPVVAMI-----------INRKGSDA-NDLSMYALAANDGGIQYLS-SYSEP 286


>gi|328874742|gb|EGG23107.1| UV-damaged DNA binding protein1 [Dictyostelium fasciculatum]
          Length = 1116

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 164/752 (21%), Positives = 319/752 (42%), Gaps = 98/752 (13%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
           Y +  T+ +PT +  ++ G+F+      +++++   +E+      G +  L  T I+G I
Sbjct: 3   YNFITTVHKPTAVTESVTGHFTSPNEKNLIISKCTKIEIFTLAPEGLVPIL-ETNIYGRI 61

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLA 121
            ++  F + G +++ + + ++  +  +L Y+  K             S  R    GQ   
Sbjct: 62  SNMKLFSVHGEKQELLFILTERFKYCVLSYDAEKKELITRASGEADDSIGRPADSGQLAI 121

Query: 122 VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIF 181
           +DP  + + +   E      +L      + T+ +          V  I  I    + P  
Sbjct: 122 IDPDSKVLALHLYEG-----LLKIIPIEKGTLKTAYNVRLQELQVIDIVFIAPTNNQPTL 176

Query: 182 AAIELDYSEADQDSTGQAASEAQKNLTFYELDLG---LNHVSRKWSEP-VDNGANMLVTV 237
           A +  D  ++             KN+  Y L L    L   +  W++  V++GA+ L+  
Sbjct: 177 AVLSKDTRDS-------------KNVNTYILSLKDKELIESANTWAQSNVEDGASKLIA- 222

Query: 238 PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFF 297
                  +G+LV  E  V +            PR   +   R    ++A     K  F F
Sbjct: 223 -----HQNGLLVVGETLVSFLKPTSS------PRTIPIAGTR----ITAVGRVDKDKFLF 267

Query: 298 LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
                 G ++ + L  + +   EL+ +        +++  L SG +F  S  G+  L + 
Sbjct: 268 --GDHLGQLYFLLLSQNEK---ELRFEKLGETCTASTISYLDSGVVFIGSALGDSQLIRL 322

Query: 358 QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE 417
            +   DP+  +  + L                       +   +L PI D  + ++ ++ 
Sbjct: 323 LS-DRDPNTNSYVTVL-----------------------DTFANLGPIPDFCLVDIEKQG 358

Query: 418 APQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFN 477
             QI    G     SLR++R G+ ++E A   LPG+  A+W++ +      D Y+++SF 
Sbjct: 359 QNQIVACSGGFKEGSLRVIRNGIGITEQASIDLPGIK-AIWSLARGS----DRYLILSFI 413

Query: 478 NATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINE--W 534
           ++T VL   GE +EE   +GF   +P+L    + D  ++Q+  SGI  +  +  +N   W
Sbjct: 414 SSTKVLEFQGEDIEETEIAGFDLQSPTLYCGNVADKQILQISTSGIYLVDHETNLNYDVW 473

Query: 535 RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPE 594
           + P   +I        Q++I+  G  LIYFE+    +++++++ EM  +++CLDI+S   
Sbjct: 474 K-PSSGSINLASHQGNQILISF-GKTLIYFEIK-DQKIIKLKELEMEFEISCLDISSFQV 530

Query: 595 GRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGEDG 651
           G +RS+   VG + D ++RILSL     ++ +  +++     P S+L +  +       G
Sbjct: 531 G-ERSKICVVGLWTDISLRILSLPT---LEQVHKENLGGEVIPRSVLMIAFE-------G 579

Query: 652 ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
            +     +L   L +G LF  +VD +   L + +   LG +P  L    + G   +   S
Sbjct: 580 IN-----YLLCSLGDGHLFNFIVDTINNTLHERKKVSLGNQPIILSKFQLKGTVNVFASS 634

Query: 712 SRPWLGYIHRGRFLLTPLSYETLEYAASFSSD 743
            RP + Y    + L + ++ + +    SF S+
Sbjct: 635 DRPTVIYSSNRKLLYSVVNLKVVVGVCSFDSE 666



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 131/308 (42%), Gaps = 36/308 (11%)

Query: 919  AGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC 978
             G I +++ ++    L LL +T V G    +  F G+LL  I   +  Y           
Sbjct: 830  CGRILVFKMID--SRLILLDETTVRGSIFCMIAFNGQLLVAINKSVHRYTWSGD----SS 883

Query: 979  ENKLFPNTIVSINTYR-------DRIYVGDIQESFHFCKYR-RDENQLYIFADDSVPRWL 1030
              KL    I   +T         D + VGD+ +S    +   +D  +L   +  S P WL
Sbjct: 884  SGKLTGEEIYGGHTASLYLAGRGDFVLVGDMMKSMALLQASGKDVKEL---SRSSQPFWL 940

Query: 1031 TAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV 1090
            T    ID DT  G+D   N+  ++   + ++E++                G  +  E I 
Sbjct: 941  TGLTFIDDDTYLGSDNSYNLILMKKNTETANEVDSQLLDNI---------GHIHTGEFIN 991

Query: 1091 QFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP 1150
            +FH G + T     S  P    S+I+ T+ G +G +++  S+ D DFFS L++ + +   
Sbjct: 992  RFHHGTLATLTDVDSPKPN---SIIFATISGCIG-VISTISKQDYDFFSKLQVGLNRVIR 1047

Query: 1151 PLCGRDHMAYRS------AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             + G  H  +RS      +    ++ IDGDL EQF  L  D   ++  ++D +  +  KK
Sbjct: 1048 GIGGFSHDRWRSFQNEHISNIESRNFIDGDLVEQFLHLRHDKMLEVTKDMDISIEDTYKK 1107

Query: 1205 LEEIRNKI 1212
            +E     I
Sbjct: 1108 IETTMQSI 1115


>gi|341886298|gb|EGT42233.1| CBN-TAG-203 protein [Caenorhabditis brenneri]
          Length = 108

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/105 (55%), Positives = 84/105 (80%)

Query: 1107 VPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFP 1166
            +PG  E+++Y T+ G++G +++F S+D+VDFF++LEMH+R E+PPLCGRDH+AYRS Y P
Sbjct: 1    MPGANEALVYTTIGGAIGCLVSFMSKDEVDFFTNLEMHVRSEYPPLCGRDHLAYRSYYAP 60

Query: 1167 VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
             K VIDGD+CEQF  + L  Q+++A+EL +T  EI KKLE+IR +
Sbjct: 61   CKSVIDGDICEQFSLMDLPKQKEVAEELGKTVSEISKKLEDIRTR 105


>gi|159489018|ref|XP_001702494.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
           reinhardtii]
 gi|158280516|gb|EDP06273.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
           reinhardtii]
          Length = 1147

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 192/858 (22%), Positives = 342/858 (39%), Gaps = 134/858 (15%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGR-----IETLVSTE 56
           Y Y +T  +PT +  ++  NF+G     ++ A    LE+      G      +  ++   
Sbjct: 16  YNYVVTAHKPTAVTQSVVANFTGPNDINLITACCTRLEIRTLGAQGLYVCVCVYAVLDVP 75

Query: 57  IFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSK-NVFDKIHQETFGKSGCRRIV 115
           I+G + SL  FR    Q D + + ++  +  +L+Y+ +K  +  + + +   ++G R   
Sbjct: 76  IYGNVSSLQAFRPRDLQTDLLFILTEKYKFCVLQYDSAKGQLVTRSNGDVADRTG-RPTD 134

Query: 116 PGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCG 175
            GQ   VDP  R + +   +    V  ++  T A         +   +  +  +C +D  
Sbjct: 135 NGQLGFVDPACRVIGLHLYDGMLKVIPMDERTGAL--------SEAYNVRLEELCVLDMA 186

Query: 176 F---------------------DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDL 214
           +                       P+   +  D   A    T +AA  A++         
Sbjct: 187 WLAPTSKGSAAGPSGSSAAAASGRPLLCVLHQDPKGARHVKTYEAALAAKE--------- 237

Query: 215 GLNHVSRKWSEP-VDNGANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRR 272
               V   W +  VD GA +L+ VP     P  GV+V  EN + Y            P  
Sbjct: 238 ---LVEGPWQQQHVDAGAGILIPVPA----PLGGVVVVGENVLSYCGGPGAGPGGGAPVS 290

Query: 273 ADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIPV 331
           A L       I++A          +LL    G +  + L HD    VS L+++       
Sbjct: 291 APLRQT----IITAWCPVDPDGSRYLLGDRLGGLHLLVLAHDGAGRVSGLRVEPLGHTST 346

Query: 332 TASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLK 391
            + +  L SG  F  S  G+  L +      +                      QP    
Sbjct: 347 PSCLSYLDSGLTFVGSRSGDCQLVRISPTPVN----------------------QPPSYV 384

Query: 392 NLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLP 451
            LV  +   +L PI+D  + +L  +   Q+ T  G     SLR++R G+ ++  A  +L 
Sbjct: 385 ELV--DSFPNLGPILDFVVMDLERQGQGQLVTCSGVDGDGSLRVIRNGIGINRQATVELA 442

Query: 452 GVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLI 509
           G+   VW+++ +  DE DAY+V++F   T +L++   E ++E    GF     +L     
Sbjct: 443 GI-KGVWSLRAHYGDEHDAYLVLTFVGETRLLALNAEEELDEAEIPGFDAAAQTLWCGNT 501

Query: 510 GDDSLMQVHPSGIRHIRED--GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD 567
             D L+QV  S +R +       ++EWR P   +I     +  QVV+A  GG L+Y EV 
Sbjct: 502 ACDHLLQVTSSSVRLVDSSSLALVSEWRPPAGFSINVAAGSPTQVVVATGGGHLVYLEVQ 561

Query: 568 MT---GQLLEVEKHEMSGDVACLDIASV-----PEGR-KRSRFLAVGSYDNTIRILSLDP 618
                  ++EV    +  +VAC+D++ +     P G  +RS  +AVG +D T+++L++  
Sbjct: 562 AQAGGAAVVEVANVTLDSEVACVDVSPLLLTAGPGGSAERSGLVAVGRWDQTLQLLAVPG 621

Query: 619 DDCMQILSVQSVSSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDM 676
              +  LSV  +     P S+L +       G +G       +   GL +G L    ++ 
Sbjct: 622 ---LTPLSVTPLGGEVIPRSVLCV-------GLEGVP-----YCMVGLGDGALHTWRLEP 666

Query: 677 VTGQLSDSRSRFLGLRPPKLFS-------------------VVVGGRAAMLCLSSRPWLG 717
            TG L+D +   LG +P  L +                      GG  ++   S RP + 
Sbjct: 667 ATGALTDRKRVVLGTKPITLRTFRTAAAAAAAAGGDNGGARGGGGGGVSVFAASDRPTVV 726

Query: 718 YIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLR 777
           Y    + + + L+   + + +SF +      +   +  AL + T ++L +    T + L 
Sbjct: 727 YSSNRKLMYSNLNENDVAHLSSFHAAAFPHSLAVASEAALTIGTADQLQKLHVRTVV-LG 785

Query: 778 YTPRRFVLQPKKKLMVII 795
             PRR       +L+ ++
Sbjct: 786 EQPRRIAHHEAGRLLGVL 803



 Score = 43.9 bits (102), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 74/196 (37%), Gaps = 32/196 (16%)

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            + VGD+  S     Y  ++  L   A D    W TA   +D D    AD   N+Y VR  
Sbjct: 968  VVVGDLMRSVSLLSYNAEQGVLEHRAADYNSGWTTAVEILDDDNYIAADNHCNLYVVRRN 1027

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV--------P 1108
             D + + E                    +++ + +FH G  +  ++  SLV         
Sbjct: 1028 ADSATDEER------------------ARLQVVGEFHTGTFINQMRNGSLVMRLPDSEHA 1069

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----A 1163
            G    +++    G LG ++A       ++ + L+  MR     + G DH  +R+      
Sbjct: 1070 GLPPPLLFAGTDGRLG-VVARLPPALYEWATKLQTAMRSVVRGVGGLDHEQWRAFANDRR 1128

Query: 1164 YFPVKDVIDGDLCEQF 1179
                +  +DGDL E  
Sbjct: 1129 CGEARGFVDGDLIESL 1144


>gi|365985726|ref|XP_003669695.1| hypothetical protein NDAI_0D01380 [Naumovozyma dairenensis CBS 421]
 gi|343768464|emb|CCD24452.1| hypothetical protein NDAI_0D01380 [Naumovozyma dairenensis CBS 421]
          Length = 1417

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 183/812 (22%), Positives = 331/812 (40%), Gaps = 167/812 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNF------------SGTKTP-EIVVARGKVLELLRPENSG 47
           + LY LTLQ  +    +  G+F            S TK P ++ +A    LE     N  
Sbjct: 16  LTLYHLTLQSKSNYTHSTIGHFVNIHSEHAYDSKSSTKLPLQLCLATENHLEFYDVSNGH 75

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN-------PSKNVFDK 100
             +   S E    I +        S   +IV+ +D+G   I++ +        +      
Sbjct: 76  LNKFFQSIEFQFKIINCKSLTPKESNCSFIVITTDNGDFSIIKLSLQNNNNNNNNYNIKT 135

Query: 101 IHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLN---RDTAARLTISSPL 157
           I    F +SG RR+ P Q+L ++     +++ A EK KL++ L     D++ ++  SSPL
Sbjct: 136 ILNYQFTRSGIRRLSPIQFLEINDDSLTIILSALEKNKLIFNLTYSKNDSSLQIMDSSPL 195

Query: 158 EAHKSHTIVYSICGIDC-----------------GFDNPIFAAIELDYSEADQDSTGQAA 200
           E  KS+ I  ++  I+C                   +NP FA+IE+D    D        
Sbjct: 196 EIIKSNFI--TMILINCYNKNNNISNIVSSHHYHHKENPFFASIEIDTITNDFF------ 247

Query: 201 SEAQKNLTFYELDLGLNHVSRKWSEPV-DNGANMLVTVPGG------------GDGP--- 244
                 L FY +DL LN + +K    + D   N L ++P               D P   
Sbjct: 248 ------LIFYMIDLNLNLIIKKNQLKLSDKNINFLCSLPNDLITTTNKNNNTKVDTPLPS 301

Query: 245 SGVLVCAENFVIYKN-QGHPDVRAVIPRRADLPAERGV-------LIVSAATHRQKTLFF 296
             VL+   ++++ K+   H +++  IP   +L  ++         +I    +      + 
Sbjct: 302 PLVLLGFNDYILIKDLNNHYNIKLDIPNNNNLSLKKNYPTTIINGIIQKLNSKDNDNSYL 361

Query: 297 FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
            LLQ+  GD+FK+     N   +  K+ YFD+IP+  S+ + K+G LF  +EF N+ L Q
Sbjct: 362 ILLQSNNGDLFKLNF---NSLKNNFKLSYFDSIPMAQSLNIFKNGLLFVNNEFNNNYLLQ 418

Query: 357 FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLV-------RIEQVESLMPIMDMR 409
           F+ I     +  S       E+ F         L NL+            ++L PI+   
Sbjct: 419 FENINTTESIHNSE------EDNF-------YKLNNLIIPSSNNNNNNIQKNLNPIISSS 465

Query: 410 IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK---KNVND 466
            +     +      L      S L  L   +   ++  S LP     +W++    K V+ 
Sbjct: 466 YS---HSQNNTNIDLWINSMNSKLFNLTNSINFIDIINSNLPPNVKNLWSLSLHPKTVSH 522

Query: 467 EFDAYIVVSFNNATLVLSIG-ETVEEVSDSGFLDTTP-------SLAVSLIGDDSLMQVH 518
             D  + ++FNN+ ++L I  +++E +S   F  T P       +L +  +G + ++QV 
Sbjct: 523 YHDI-LFLAFNNSMIILKIKPDSMENLS---FKHTNPFIMKNDCTLLIKKLG-NLIIQVC 577

Query: 519 PSGIRHI-------REDGRINE---WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV-- 566
            +  + I        +D    E   W  P    I+   +   Q+++ALS  E+IYF++  
Sbjct: 578 KNQFKQITFSIEEKNDDYNFVEKSVWYPPAGIHIIHSIATNSQLILALSNNEIIYFQLYD 637

Query: 567 --------------DMTGQLLEVEKH-EMSGDVACLDIASVPEGRKR----------SRF 601
                         +    L+E + +   S  +  +D+ +                 S +
Sbjct: 638 TTTTTNNNNNINYTNNQDSLIEYQNNPNFSNFIKSIDLINSSSSSSSSSSSSSSSHYSDY 697

Query: 602 LAVGSYDNTIRILSL---DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
           LA+   ++TI ILSL   + D+ ++++S+Q+  +P   L  +         +  +    +
Sbjct: 698 LAIALDNSTINILSLKRNNQDEFLEVVSLQNTMAPINDLKLI-------SNNYNNSNKQI 750

Query: 659 FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLG 690
            L+  L NGV   + ++ + GQ+ D + ++LG
Sbjct: 751 NLHVTLTNGVYMNSKINPLNGQIFDVKLKYLG 782



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 139/344 (40%), Gaps = 68/344 (19%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC----ENKLFPNTIVS 989
            LE LH+T +      + +F   +L      L L +LGKK+LL+K       KL    IV 
Sbjct: 1070 LESLHETLISDHIYTMVEFNQMILLSSLNNLILLNLGKKQLLKKSITIISKKLSIKKIVK 1129

Query: 990  INTYRD-RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
            I  + + RI VG++ ES  F ++    N     ADD   R +T+   +D  T+ G DKFG
Sbjct: 1130 ITQWNNERIAVGELNESVTFFQFDSLTNSFIPLADDITKRHVTSLLFLDKSTVIGGDKFG 1189

Query: 1049 NIYFVRLPQD------------------------VSDEIEEDPTGGKIKWEQGKLNGAPN 1084
            N++ +RL ++                           E+         +  +  +   P 
Sbjct: 1190 NVWTLRLSRENERKVLNAQSIANASASSSSSSSLSFQELLNRNITKSTQINKSNIYDVPF 1249

Query: 1085 KMEEIVQFHVGDVVTSLQKASLVPGGGE-SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEM 1143
            K++ +  F + D++ +      +      ++IY T+ GS+G ++   S+  +     +E 
Sbjct: 1250 KLKLLNHFFINDIILNFHLIENINWSDRPTIIYTTLQGSIGCLIPLLSKSQIIILKQIEK 1309

Query: 1144 HMR------QEHP-----------------------------PLCGRDHMAYRSAYFPVK 1168
             +        +H                               + GRDH  YR  Y PV+
Sbjct: 1310 KLSNVDTILNDHNEDDEITNDNDAEREIKKKNKGTDDEFIMYSIVGRDHSKYRGYYTPVR 1369

Query: 1169 DVIDGDLCEQFPTLSLDLQRKIADELDR---TPGEILKKLEEIR 1209
            +VIDGDLCE F T     + K+   + +      +I+K + EIR
Sbjct: 1370 NVIDGDLCETFSTYKSIEKDKLTKSIGKKNLNANDIIKYINEIR 1413


>gi|219125301|ref|XP_002182922.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum
           CCAP 1055/1]
 gi|217405716|gb|EEC45658.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum
           CCAP 1055/1]
          Length = 1284

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 149/667 (22%), Positives = 271/667 (40%), Gaps = 80/667 (11%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGR--IETLVSTEIFG 59
           Y +T   P G++     NF+   + +++VA+ + LE+  LR    G      L S  I G
Sbjct: 12  YVVTAHPPGGVLLTAKCNFTSPFSLDVLVAKSRRLEVRQLRTTTEGLSPFPILASVPING 71

Query: 60  AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY---NPSKNVFDKIHQETFGKSGCRRIVP 116
            I  L  F++ GS   Y+ V +   +  +L Y   N     +  +   +         V 
Sbjct: 72  RIVGLVPFKVHGSDTSYVFVLTARQQYAVLAYDRTNSGSAAYPLVTLASGTLQSQEHAVL 131

Query: 117 GQ------YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSIC 170
           GQ       +A+D   R + +   +    +    R  A++  + +P         +  + 
Sbjct: 132 GQEAESGPIVAIDHFHRCIALHVYDGLLTIIPSTRTLASQQLLGTPFHCRIEERTILHLA 191

Query: 171 GIDCGFDN-PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDN 229
            +   F+  P  A +  D   A Q  T    +  +KN+  Y                VD 
Sbjct: 192 FLQIPFEALPQLAVLHQDARGA-QHITSHVINWKRKNIFLYGSSSAPAATEWLQKSNVDG 250

Query: 230 GANMLVTVPGGGD---GPS-----GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGV 281
           G+++++ VP        P+     GVLV  +  + + N    +V  V+P    +P    +
Sbjct: 251 GSSLIIPVPAEAPPDFAPAKHRSGGVLVVGQRQLTFINN---NVTKVVP----IPQALHL 303

Query: 282 LIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSG 341
            +          L  +LL  E+G++  VT+    + V  L+I    +  +  S+  L+ G
Sbjct: 304 CVEELPADPNGGLPRYLLADEFGNLHMVTIVLVVDKVVALQIDTLGSCTLATSIAYLREG 363

Query: 342 YLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVES 401
            +F  S  G+  L Q   I  +P V+      M   E              L  +E+   
Sbjct: 364 LVFVGSTLGDPQLIQ---IHDEPIVDVEDEEDMVGAES-----------SYLSVVEEYTH 409

Query: 402 LMPIMDMRIA-------------NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVS 448
           L PI+D  +               +      Q+ T  G     SLR++R G+ ++E A  
Sbjct: 410 LGPILDFDLVPTAPGGGGLGQTEGIHGPSQSQVVTASGSSKSGSLRLIRNGIGMNESAAV 469

Query: 449 QLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI-----------------GETVEE 491
           ++PG+ + VW+++++  D  D Y+V SF + T VL +                 G T+EE
Sbjct: 470 EIPGIQN-VWSLRRSFADVDDTYLVQSFVHETRVLGVTTMDDMSQDEKEGDVAPGGTLEE 528

Query: 492 VSDSGFLDTTPSLAVSLI--GDDSLMQVHPSGIRHIREDGRINEWRTP-GKRTIVKVGSN 548
           V   G   +  +L V  +    + L+Q+    +R    +  ++ W  P G    V   + 
Sbjct: 529 VFLIGLKSSCATLYVGNVQAHQNGLLQITEGEVRFATMEAVLDTWLVPSGAAITVGTANE 588

Query: 549 RLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYD 608
             Q+ +AL+GG+++Y +++  G++ E    +M  +V+CL++         S FLAVG +D
Sbjct: 589 AGQIAVALNGGKVLYLKIE-EGKIRECSGQQMEREVSCLNLNPFAATSHTSSFLAVGLWD 647

Query: 609 N-TIRIL 614
           + T+R+ 
Sbjct: 648 DFTVRLF 654



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 32/214 (14%)

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+  S    +Y      L   A D  P W TA   +  D   GA+ + N++ +R  + 
Sbjct: 1042 VGDLMRSVSLMQYYPQHETLEEVARDFNPNWTTAVEMLTDDVYIGAENWNNLFCLRRNKA 1101

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV--------PGG 1110
             + E        +I+           +++ I +FH+G++       SLV           
Sbjct: 1102 ATSE--------EIRC----------RLDNIGEFHLGEMCNKFMSGSLVMPVSSNSTTSS 1143

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSA-----YF 1165
              + ++GTV GSLG +L    R    FF  LE  + +   P+ G  H  YRS        
Sbjct: 1144 RRATLFGTVEGSLGVILGLDGR-TAAFFITLERAIAKTIQPVGGFSHQLYRSCQAELRVH 1202

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPG 1199
            P    +DGDL E F  L       +  E++R  G
Sbjct: 1203 PAHGFVDGDLVETFLDLDRRTMEAVVAEMNRDGG 1236


>gi|302820387|ref|XP_002991861.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
 gi|300140399|gb|EFJ07123.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
          Length = 1292

 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 222/486 (45%), Gaps = 77/486 (15%)

Query: 373 LMETEEGFQPVFFQPRGLKNLVRIEQ--------VESLMPIMDMRIANLFEEEAPQIFTL 424
           L+ T +GF     +  G  +++++E         V+++ PI+D  + + + E+  Q+F  
Sbjct: 398 LLWTSDGFMTAMIE-MGDGHVLKVEDGQLSFQSFVQNIAPILDFSLVDYYGEKQDQMFAC 456

Query: 425 CGRGPRSSLRILRPGLAVSEMAVSQ--LPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLV 482
           CG     S+RI+R G +V ++  +     GV S +WT++    D + A+ ++SF   T V
Sbjct: 457 CGGDEEGSVRIIRNGNSVEKLICTPPVYQGV-SGIWTMRYRFKDPYHAFFLISFVEETRV 515

Query: 483 LSIGETVEEVSDS-GFLDTTPSLAVSLIGDDSLMQV--------------HPSGIRHIRE 527
           LS+G    +++D+ GF     +LA  L+ D  + QV              HP+G+     
Sbjct: 516 LSVGLNFVDITDAVGFESQVNTLACGLVEDGWVAQVWRYEVKLCSPTKAAHPAGVSG--S 573

Query: 528 DGRINEWRTPGKRTIVKVGS-NRLQVVIALSGGELIYF-----EVDMTGQLLEVEKHEMS 581
           +     WR PG    + VG+  R +V++AL+   L+         D + +L+E++   M 
Sbjct: 574 NPLSTTWRKPGYP--ISVGAVCRSRVILALARPGLLLMLGATQTSDGSFELVELQLCMME 631

Query: 582 GDVACLDIA-------------------SVPEGRKRSRFLAVGSYDNTIRILSLDPDDCM 622
            +++C+ I                    +VP G        VG++  ++ +LS+ P D  
Sbjct: 632 AEISCISIPQGDISIPVPPTIAGLHAGNTVPAGLDLGNVCVVGTHKPSVELLSIVPGDKF 691

Query: 623 QILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF----LNAGLQNGVLFR------- 671
              +V  VS      L   V  +V G    D   +LF    + AGL+NG+L R       
Sbjct: 692 APFAVGQVS------LITSVGTAVSGCIPQDVRLALFDRLYILAGLRNGMLLRYEWPEDT 745

Query: 672 -TVVDMVTGQLSDSRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGYIHRGRFLLTPL 729
            ++V     QL    +R LG+ P  L  +     RA ++ LS RPWL  + + R   T +
Sbjct: 746 PSLVLSKPAQLHLVAARRLGVSPVCLVPLEACALRADIIALSDRPWLLQMAK-RISYTSI 804

Query: 730 SYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKK 789
           S++   +A    S  C +G++ +A  +L +  +E+   T N   L L  T RR +  P+ 
Sbjct: 805 SFQPSTHATPVCSKDCPKGIIFLADCSLHLVEMEQ-SRTLNVQKLHLGCTGRRVLYHPES 863

Query: 790 KLMVII 795
            +++++
Sbjct: 864 GVLIVL 869



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 38/230 (16%)

Query: 986  TIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD 1045
             I SI+     I VGD ++      YR D  +L     D + R ++    +D DT    D
Sbjct: 1045 VITSISVRFTTIAVGDCRDGVLLFTYREDSKKLEPIRCDPMRRLVSDCTLVDVDTAVVVD 1104

Query: 1046 KFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNK-MEEIVQFHVGDVVTSLQKA 1104
            + GN  F  L  +   E + D             +G+P K +E    FH+G+V T+++K 
Sbjct: 1105 RQGN--FCALSANEETEGKCDSN-----------SGSPEKNLEAHCWFHIGEVCTTVRKG 1151

Query: 1105 S--------------LVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ--- 1147
            S              L+P  G+S +  T +  LG++  F  R   + +S L+   R+   
Sbjct: 1152 SFAFKAVEDSCSVDRLIPNMGKSCVIATTL--LGSVFIF-VRMTGEEYSLLQALQRRLSV 1208

Query: 1148 --EHPPLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLSLDLQRKIADE 1193
                 P+ G DH  +R    P  VK+V+DGDL EQF  L+   Q  +  E
Sbjct: 1209 LPATAPVLGNDHARFRGQGRPAGVKEVLDGDLLEQFLELTSAEQVAVLKE 1258



 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 8   LQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQF 67
           LQ+ + +  A+ G+       E+V  +   LEL+     G ++ +    +FG I+ +   
Sbjct: 22  LQKSSVVSYAVCGHIRSPLMLEVVFGKETALELVVLVEDGSVQPVCEQSVFGIIKDMKLL 81

Query: 68  ------RLTGSQ---KDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
                 R   SQ   KD +V+ SDSG++  L ++   + F  + Q      G      G 
Sbjct: 82  PWNEHRRAPYSQTYGKDLLVLLSDSGKLSFLTFSVDLHRFVAVSQIHLSHPGTSLRELGW 141

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAA 149
            LAVD + RAV + A E   LV +     AA
Sbjct: 142 LLAVDSRSRAVAVSAIE--DLVAIFPTSVAA 170


>gi|302822731|ref|XP_002993022.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
 gi|300139222|gb|EFJ05968.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
          Length = 1277

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 238/531 (44%), Gaps = 81/531 (15%)

Query: 373 LMETEEGFQPVFFQPRGLKNLVRIEQ--------VESLMPIMDMRIANLFEEEAPQIFTL 424
           L+ T +GF     +  G  +++++E         V+++ PI+D  + + + E+  Q+F  
Sbjct: 387 LLWTSDGFMTAMIE-MGDGHVLKVEDGQLSFQSFVQNIAPILDFSLVDYYGEKQDQMFAC 445

Query: 425 CGRGPRSSLRILRPGLAVSEMAVSQ--LPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLV 482
           CG     S+RI+R G +V ++  +     GV S +WT++    D + A+ ++SF   T V
Sbjct: 446 CGGDEEGSVRIIRNGNSVEKLICTPPVYQGV-SGIWTMRYRFKDPYHAFFLISFVEETRV 504

Query: 483 LSIGETVEEVSDS-GFLDTTPSLAVSLIGDDSLMQV--------------HPSGIRHIRE 527
           LS+G    +++D+ GF     +LA  L+ D  + QV              HP+G+     
Sbjct: 505 LSVGLNFVDITDAVGFESQVNTLACGLVEDGWVAQVWRYEVKLCSPTKAAHPAGVSG--S 562

Query: 528 DGRINEWRTPGKRTIVKVGS-NRLQVVIALS-GGELIYFEVDMTG----QLLEVEKHEMS 581
                 WR PG    + VG+  R +V++AL+  G L+      T     +L+E++   M 
Sbjct: 563 SPLSTTWRKPGYP--ISVGAVCRSRVILALARPGLLLMLGTTQTSAESFELVELQLCMME 620

Query: 582 GDVACLDIA-------------------SVPEGRKRSRFLAVGSYDNTIRILSLDPDDCM 622
            +++C+ I                    +VP G        VG++  ++ +LS+ P D  
Sbjct: 621 AEISCISIPQGDISIPVPPTIAGLHAGNTVPAGVDLGNVCVVGTHKPSVELLSIVPGDKF 680

Query: 623 QILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF----LNAGLQNGVLFR------- 671
              +V  VS      L   V  +V G    D   +LF    + AGL+NG+L R       
Sbjct: 681 APFAVGQVS------LITSVGTAVSGCIPQDVRLALFDRLYILAGLRNGMLLRYEWPEDT 734

Query: 672 -TVVDMVTGQLSDSRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGYIHRGRFLLTPL 729
            ++V     +L    +R LG+ P  L  +     RA ++ LS RPWL  + + R   T +
Sbjct: 735 PSLVLSKPAELHLIAARRLGVSPVCLVPLEACALRADIIALSDRPWLLQMAK-RISYTSI 793

Query: 730 SYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKK 789
           S++   +A    S  C +G++ +A  +L +  +E+   T N   L L  T RR +  P+ 
Sbjct: 794 SFQPSTHATPVCSKDCPKGIIFLADCSLHLVEMEQ-SRTLNVQKLRLGCTGRRVLYHPES 852

Query: 790 KLMVIIET---DQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDE 837
            +++++      +  +   E  +    C    G+G+     M+ M+ GD++
Sbjct: 853 GVLIVLRLLSEHRSDVCCIEPLSGAVLCVHPFGVGQIVK-CMELMKLGDEQ 902



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 39/224 (17%)

Query: 987  IVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADK 1046
            I SI+     I VGD ++      YR D  +L     D + R ++    +D DT    D+
Sbjct: 1042 ITSISVRFTTIAVGDCRDGVLLFTYREDSKKLEPIRCDPMRRLVSDCTLVDVDTAVVVDR 1101

Query: 1047 FGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNK-MEEIVQFHVGDVVTSLQKA- 1104
             GN  F  L  +                E+ + NG+P K +E    FH+G+V T+++K  
Sbjct: 1102 HGN--FCALSTN----------------EETEGNGSPEKNLEAHCWFHIGEVCTTVRKVR 1143

Query: 1105 --------SLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ-----EHPP 1151
                    +        VI  T++GS+   +  +  +    +S L+   R+        P
Sbjct: 1144 TSRFLCKDTSRECSVSCVIATTLLGSVFIFVRITGEE----YSLLQALQRRLSFLPATAP 1199

Query: 1152 LCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLSLDLQRKIADE 1193
            + G DH  +R    P  VK+V+DGDL EQF  L+   Q  +  E
Sbjct: 1200 VLGNDHARFRGQGRPAGVKEVLDGDLLEQFLELTSAEQVAVLKE 1243



 Score = 47.0 bits (110), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 8   LQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQF 67
           LQ+ + +  A+ G+       E+V  +   LEL+     G ++ +    +FG I+ +   
Sbjct: 22  LQKSSVVSHAVCGHIRSPLMLEVVFGKETALELVVLVEDGSVQPVCEQSVFGIIKDMKLL 81

Query: 68  ------RLTGSQ---KDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ 118
                 R   SQ   KD +V+ SDSG++  L ++   + F  + Q      G      G 
Sbjct: 82  PWNEHRRAPYSQTYGKDLLVLLSDSGKLSFLTFSVDLHRFVAVSQIHLSHPGTSLRELGW 141

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAA 149
            LAVD + RAV + A E   LV +     AA
Sbjct: 142 LLAVDSRSRAVAVSAIE--DLVAIFPTSVAA 170


>gi|42564075|ref|NP_187802.2| Cleavage and polyadenylation specificity factor (CPSF) A subunit
            protein [Arabidopsis thaliana]
 gi|29824376|gb|AAP04148.1| unknown protein [Arabidopsis thaliana]
 gi|110739103|dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana]
 gi|332641608|gb|AEE75129.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
            protein [Arabidopsis thaliana]
          Length = 1379

 Score =  126 bits (317), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 203/935 (21%), Positives = 377/935 (40%), Gaps = 172/935 (18%)

Query: 389  GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVS 448
            G + L  +  ++++ PI+D  + +   E+  QIF  CG  P  SLRI+R G+ V ++   
Sbjct: 456  GTEKLHWMSSIQNIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKL--- 512

Query: 449  QLPGVP-----SAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTP 502
             L   P     +  WTVK  + D + +++V+SF   T VLS+G + ++V+DS GF     
Sbjct: 513  -LKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVC 571

Query: 503  SLAVSLIGDDSLMQVHPSGIR------HIREDG------RINEWRTPGKRTIV--KVGSN 548
            + A  L+ D  L+Q+H   IR          DG        + W  P   +I    VG N
Sbjct: 572  TFACGLVADGLLVQIHQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPENVSISLGAVGQN 630

Query: 549  RLQVVIALSGGELIYFEV-------DMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR- 600
                +I +S     +  +           ++ E+++  +  +V+C+ +     G+KRSR 
Sbjct: 631  ----LIVVSTSNPCFLSILGVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSRD 686

Query: 601  --------------------FLAVGSYDNTIRILSLDPDDC-MQILSVQSVSSPPESLLF 639
                                FL +G++  ++ +LS   D   +++L+   VS    + + 
Sbjct: 687  SSPDNFCKAAIPSAMEQGYTFL-IGTHKPSVEVLSFTEDGVGVRVLASGLVSL--TNTMG 743

Query: 640  LEVQASVGGEDGADHPASLFLNAGLQNGVLFR----------------------TVVDMV 677
              +   +  +        L++ +GL+NG+L R                        +D V
Sbjct: 744  TVISGCIPQDVRLVLVDQLYVLSGLRNGMLLRFEWAPFSNSSGLNCPDYFSHCKEEMDTV 803

Query: 678  TGQLSD-------SRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLS 730
             G+  +         +R +G+ P  L        + ++ LS RPWL    R     T +S
Sbjct: 804  VGKKDNLPVNLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWLLQTARQSLSYTSIS 863

Query: 731  YETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPK-K 789
            ++   +A    S +C +G++ V+ N L +  +    +  N     L  TPR+ +   + K
Sbjct: 864  FQPSTHATPVCSFECPQGILFVSENCLHLVEMVH-SKRRNAQKFQLGGTPRKVIYHSESK 922

Query: 790  KLMV----IIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKY--DPL 843
             L+V    + +T    +   +  +           GE G  +M+ +  G++        L
Sbjct: 923  LLIVMRTDLYDTCTSDICCVDPLSGSVLSSYKLKPGETGK-SMELVRVGNEHVLVVGTSL 981

Query: 844  SDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEA-AFSIC---------TVNFH 893
            S      P  E++     + +L        CL   Q++++ + +IC         T  FH
Sbjct: 982  SSGPAILPSGEAESTKGRVIIL--------CLEHTQNSDSGSMTICSKACSSSQRTSPFH 1033

Query: 894  DKEHGTLLAVG-TAKGLQFWPKRNIVAGYIHIYRFVEEGKS--LELLHKTQVEGIPLALC 950
            D        VG T + L      +    Y +    ++E ++  L L   T   G+ LA+C
Sbjct: 1034 D-------VVGYTTENLSSSSLCSSPDDYSYDGIKLDEAETWQLRLASSTTWPGMVLAIC 1086

Query: 951  QFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCENKLFPNTIVSINTYRDR 996
             +     LA  G               ++ + +G+ R +           I S+ TY  R
Sbjct: 1087 PYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFM-----------ITSLRTYFTR 1135

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            I VGD ++   F  Y  +  +L+    D   R +     +D +++A +D+ G+I  +   
Sbjct: 1136 IVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILSC- 1194

Query: 1057 QDVSD--------EIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP 1108
            +D SD           E        +  G++  +  K   I +    DV+ S   +  + 
Sbjct: 1195 KDHSDFGMKHLEYSSPESNLNLNCAYYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSID 1254

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP---PLCGRDHMAYRSAYF 1165
               +++I GT++GS+      SS ++ +    ++  +   HP   P+ G DH  +R    
Sbjct: 1255 TADDTIIAGTLLGSIFVFAPISS-EEYELLEGVQAKLGI-HPLTAPVLGNDHNEFRGREN 1312

Query: 1166 P--VKDVIDGDLCEQFPTLSLDLQRKIADELDRTP 1198
            P   + ++DGD+  QF    L+L  +  + +  TP
Sbjct: 1313 PSQARKILDGDMLAQF----LELTNRQQESVLSTP 1343



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 11/173 (6%)

Query: 10  QPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQF-- 67
           +P+ ++    G F    + +IV  +   +EL+     G +E++    +FG I+ LA    
Sbjct: 43  RPSVVLQVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTIKDLAVIPQ 102

Query: 68  --RLTGSQ----KDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLA 121
             +L  +     KD + V SDSG++  L ++   + F  I        G  RI  G+ L 
Sbjct: 103 SSKLYSNSLQMGKDLLAVLSDSGKLSFLSFSNEMHRFSPIQHVQLSTPGNSRIQLGRMLT 162

Query: 122 VDPKGRAVMIGACEKQKLVYVLNRDTAARLT---ISSPLEAHKSHTIVYSICG 171
           +D  G  + + A   +  ++ L+  +   +    IS P E   + + + +I G
Sbjct: 163 IDSSGLFLAVSAYHDRFALFSLSTSSMGDIIHQRISYPSEDGGNGSSIQAISG 215


>gi|449519304|ref|XP_004166675.1| PREDICTED: DNA damage-binding protein 1a-like [Cucumis sativus]
          Length = 596

 Score =  126 bits (316), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 159/686 (23%), Positives = 286/686 (41%), Gaps = 126/686 (18%)

Query: 552  VVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNT 610
            V++A  GG L++ E+   G L+E +  ++  +++CLDI  + +    S+  AVG + D +
Sbjct: 4    VLLATGGGVLVHLEI-CDGLLVEKKHIQLEHEISCLDINPIGDNPNCSQLAAVGMWTDIS 62

Query: 611  IRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGV 668
            +RI SL PD  + +L+ + +     P S+L    +               F    L +G 
Sbjct: 63   VRIFSL-PD--LNLLTKEQLGGEIIPRSVLLCTFEGVC------------FCLCALGDGH 107

Query: 669  LFRTVVDMVTG----QLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRF 724
            L   +++  +     +L D +   LG +P  L +        +   S RP + Y    + 
Sbjct: 108  LLNFILNTNSNSNSCELMDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKL 167

Query: 725  LLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFV 784
            L + ++ + + +   F+S    + +       L + TI+ + +  +  ++PL    RR  
Sbjct: 168  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHARRIC 226

Query: 785  LQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLS 844
             Q + +   I                                            +Y+   
Sbjct: 227  HQEQSRTFAICSL-----------------------------------------RYNQSG 245

Query: 845  DEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVG 904
             E         D  +  IR+LD ++  +     L   E   SI + +F D ++     VG
Sbjct: 246  TE---------DTEMHFIRLLDDQTFESISTYALDTYEYGCSILSCSFSD-DNNVYYCVG 295

Query: 905  TAKGLQFWPKRNI-VAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPV 963
            TA  +   P+ N    G I ++  VEEGK L+L+ + + +G   +L  F G+LLA I   
Sbjct: 296  TAYVM---PEENEPTKGRILVF-VVEEGK-LQLIAEKETKGSVYSLNAFNGKLLAAINQK 350

Query: 964  LRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQL 1018
            ++LY     D G + L  +C +      +  + T  D I VGD+ +S     Y+ +E  +
Sbjct: 351  IQLYKWTLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAI 409

Query: 1019 YIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGK 1078
               A D    W++A   +D D   GA+ + N++ VR                  K  +G 
Sbjct: 410  EERARDYNANWMSAVEILDDDIYLGAENYFNLFTVR------------------KNSEGA 451

Query: 1079 LNGAPNKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVIYGTVMGSLGAMLAFSS 1131
             +   +++E + ++H+G+ V   Q  SLV        G   +VI+G+V G +G ++A   
Sbjct: 452  TDEERSRLEVVGEYHLGEFVNRFQHGSLVMRLPDSDVGQIPTVIFGSVNGVIG-VIASLP 510

Query: 1132 RDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLSLDL 1186
             D   F   L+ ++R+    + G  H  +RS          K+ +DGDL E F    LDL
Sbjct: 511  HDQYVFLERLQSNLRKVIKGVGGLSHEQWRSFNNEKRTAEAKNFLDGDLIESF----LDL 566

Query: 1187 QRKIADELDR----TPGEILKKLEEI 1208
             R   +E+ R    +  E+ K++EE+
Sbjct: 567  NRSKMEEISRAMSVSAEELCKRVEEL 592


>gi|289900101|gb|ADD21422.1| Rse1p [Saccharomyces kudriavzevii]
          Length = 450

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 184/408 (45%), Gaps = 79/408 (19%)

Query: 868  RSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRF 927
            +  N+ CL ++ +N    S   ++F  +    ++  G  + L F   R +V+     +  
Sbjct: 52   KCHNSDCLFKIIENVHCISATIMDFTKQIDHLVICSGDKRLLTF---RILVSKDKSFF-- 106

Query: 928  VEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK--CENKLFPN 985
                  +ELLH+T++     ++ +F+  LLA I   + LY LGKK+LLRK   +  +   
Sbjct: 107  -----DIELLHETEIISPIHSMLKFKNFLLAAIDSTVVLYGLGKKQLLRKSVTQTPVSIT 161

Query: 986  TIVSINTYR-DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
             IVS++ +  +R+ VGDI ES     +    N      DDSV R +T    +D  T+ GA
Sbjct: 162  KIVSMDQWNYERLAVGDIHESVTLFIWDSAGNVFIPLVDDSVKRHVTTLKFLDEATIIGA 221

Query: 1045 DKFGNIYFVRLPQDVSDEI-EEDP---TGGKIKWE------QGKLNGAPN------KMEE 1088
            DKFGN + +R P +  + I   DP   + G I +       Q KL   PN      K + 
Sbjct: 222  DKFGNAWTLRCPLECENIISNHDPSELSDGTINYPLHLIILQQKL---PNTYDCKFKFQL 278

Query: 1089 IVQFHVGDVVTSLQKA-SLVPGGGESVIYGTVMGSLGAMLAFSSRD-------------D 1134
            +  F V D++T +    S+        IY  + G++G  +   S+              D
Sbjct: 279  LNHFFVNDIITDIHILDSISSSDRPGCIYIGLQGTIGCFIPLLSKGNVLTMTKIENIMAD 338

Query: 1135 VDFFSHLEMHMRQE-------------------------HPPLC-------GRDHMAYRS 1162
             D   +LE  +R++                         +  +C       GRDH +YRS
Sbjct: 339  ADDIFYLEYELRRKSNNTSKEDDEEGSAGVVLHGRRDMINGTICEGSYSIVGRDHQSYRS 398

Query: 1163 AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTP-GEILKKLEEIR 1209
             Y PV+ VIDGDLCE F  LS++ Q  +A +L  T   +I++++ E+R
Sbjct: 399  YYVPVRKVIDGDLCENFLRLSVNEQEFLAKDLKNTQVDDIIQRINEVR 446


>gi|50292811|ref|XP_448838.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74608786|sp|Q6FLQ6.1|RSE1_CANGA RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|49528151|emb|CAG61808.1| unnamed protein product [Candida glabrata]
          Length = 1296

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 180/807 (22%), Positives = 336/807 (41%), Gaps = 132/807 (16%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEI--F 58
           M LY LTLQ+ +  + ++ G+F G  + E+VVA    +EL   + +G++   V  +I  F
Sbjct: 1   MELYHLTLQRQSNYVHSVKGSFLGRDSNELVVATQTHIELY--DFAGKVRRKVGNDIVLF 58

Query: 59  GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET-----FGKSGCRR 113
            ++ +L            +++G + G +V+ ++  S    D++  ++     F  S  + 
Sbjct: 59  TSLLALDTIWDEDGLAHLVMLGQN-GNLVVAKFALSG---DRLQLDSEFLYRFDNSVEKT 114

Query: 114 IVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPL-EAHKSHTIVYSICGI 172
            +P     V     ++++     QK+V  ++     R    SP+  ++  H++V  +C +
Sbjct: 115 WLP----KVVANKSSILVTWGLTQKIVVPVSWSQEPRF--RSPIFFSNAEHSVVLELCSL 168

Query: 173 DCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLG---LNHVSRKWSEPVDN 229
               D+  + ++ELD                + N  F++ +L    L +     S  VD+
Sbjct: 169 TSFEDH--YVSLELD----------TRLKVYKLNFLFFDRNLQSLLLTNSYNLKSNEVDD 216

Query: 230 GANMLVTVPG--------------GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPR--RA 273
             N +  +P                   P  ++   ++ +I    G   ++   P     
Sbjct: 217 RPNFITDIPDLAVYGVSTAINKSTSKKNPFVLIGFNKHILIKDMMGIYSLKCEFPADIME 276

Query: 274 DLPAERGVLIVSAATH--RQKTLFFFLLQTEYGDIFKVTLEHDNEHVSE--LKIKYFDT- 328
            LP ++ +LIV++     +    F  LLQT  G +FKV +  + E  +    K+ YFD  
Sbjct: 277 SLPMDKKLLIVASDLQILKNNVGFLLLLQTNTGHLFKVIIFPNEEDRNRPIAKLGYFDKV 336

Query: 329 --IPVTASMCVLKSGYLFAASEFG-NHALYQFQAIGADPDVEASSSTLMETEEGFQPVFF 385
             I  ++ + +  +G ++  S+F  +H    F++IG             + +E +  +  
Sbjct: 337 KHISNSSKLHIFNNGSMYINSQFNYDHVYLNFESIG-------------DNDENYDKI-- 381

Query: 386 QPRGLKNLVRIEQVESLMPIMDMRIANL-FEEEAPQIFTLCGRGPRSS----LRILRPGL 440
                +N+  I +  ++ PI      NL   E  P  F     G R++    + I+R  +
Sbjct: 382 -DNENENISVISKHTNINPIA----LNLCLMENMPLTFMHFQGGNRTTDSEKVNIIRNAI 436

Query: 441 AVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIG-ETVEE---VSDSG 496
            + E   S LP   S ++T+K           +   N  T++L I  +++E+    SD+ 
Sbjct: 437 PLKEYVSSPLPQGVSNIFTIKTQYQSYHSFIFLTMINFTTVILKIADDSIEQYIPASDTF 496

Query: 497 FLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINE-------WRTPGKRTIVKVGSNR 549
            L    ++ V+ +GD+S++QV     R I  D +  E       W  P   +I+   SN 
Sbjct: 497 KLKDDMTIHVATMGDNSIIQVCKDEFRQILLDSKDEENFKMNLKWYPPAGVSILSAVSNF 556

Query: 550 LQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDN 609
            Q+++ALS  E++Y +++    L+E +      DV    +A + +  K+S  LAVG+ DN
Sbjct: 557 SQLILALSNNEIVYLQLE-NNTLIEYKNRPELPDVIT-SLALLNDNTKKSEILAVGTSDN 614

Query: 610 TIRILSLDPDD---CMQILSVQSVSSPPESLLFLE-----VQASVGGEDGADHPASLFLN 661
            + +LSL+  D     + +  Q++ + P SLL L      V   +G EDG+     L L 
Sbjct: 615 MVNVLSLEIVDEAISFETVVFQALDAIPSSLLILNQGHKLVNLHIGVEDGSYLVNRLDLR 674

Query: 662 AGLQNGVLFRTV------------VDMVTGQLS-------DSRSRFLGLRPPKLFSVVVG 702
               N +L + +            VD+    L        +S+   L  R  K   VV+ 
Sbjct: 675 NMSINNILRKQLGTRSIKALNHIGVDLRNDTLQYDDDESGNSKENTLKNRGEKTSVVVIH 734

Query: 703 GRAAMLCLSSRPWLGYIHRGRFLLTPL 729
           G        +R W  Y       + PL
Sbjct: 735 G--------NRTWANYSSHSNMYIRPL 753



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 143/355 (40%), Gaps = 78/355 (21%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL--FPNTIVSIN 991
            +EL+H+T  +     +  F+  L+      L   ++GK +LL K       +   I  ++
Sbjct: 945  MELIHETHFDNEVFCIKVFRDMLIVPQYNRLLFCEVGKTKLLNKMIGPAVDYVEKITVLD 1004

Query: 992  TYRD-RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
             + D RI +GD + S    ++    +++ + A+D   R +TA   +D  T+ G DKFG++
Sbjct: 1005 CWADDRIAIGDFRNSVSLLQFSS-SHEVNVIANDICTRDVTAIKFLDRSTIIGGDKFGSV 1063

Query: 1051 YFVRLP-QDVSDEIEEDPTGGKIKWEQGKL-------NGAPN------KMEEIVQFHVGD 1096
            + +RL  QD  ++I +     K++ +Q  L         APN      K++ + QF + D
Sbjct: 1064 WVLRLSIQD--EKILQSCDNNKVELQQHLLREKGTLREKAPNILNTYFKLDLVNQFFIND 1121

Query: 1097 VVTSLQKASLVPGGGESVI-YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGR 1155
            +VT      +       +I Y  + G++G +L    + ++     +E  M+        +
Sbjct: 1122 IVTGFSVEEITQASDRPIIFYYGIQGTIGCLLPLLVKSEISKLRSIEQMMKSADETWFLK 1181

Query: 1156 ----------------------------DHMAYRSA------------------------ 1163
                                        DH   R+A                        
Sbjct: 1182 NELLNEKIGIELEDKENHEYDLAVHSVIDHEVGRTAGNWASSSGFIEGKFTTLDCDHTAY 1241

Query: 1164 ---YFPVKDVIDGDLCEQFPTLSLDLQRKIADEL--DRTPGEILKKLEEIRNKIV 1213
               Y PVK+VIDGD+CE +  L+ DL+  +      D     I++ L ++RN  +
Sbjct: 1242 RSYYAPVKNVIDGDICETYLNLTDDLKAYLTKHASPDNDLTTIVQTLMKVRNNFI 1296


>gi|449488592|ref|XP_004158102.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
           [Cucumis sativus]
          Length = 570

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 127/562 (22%), Positives = 245/562 (43%), Gaps = 71/562 (12%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
           ++ Y +T  +PT +  +  GNF+G +   +++A+   +E+      G ++ ++   I+G 
Sbjct: 3   VWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTAQG-LQPMLDVPIYGR 61

Query: 61  IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQY 119
           I +L  FR  G  +D++ + ++  +  +L+++  S  +  +   +   + G R    GQ 
Sbjct: 62  IATLELFRPHGEAQDFLFIATERYKFCVLQWDTESSELITRAMGDVSDRIG-RPTDSGQI 120

Query: 120 LAVDPKGRAVMIGACEKQKLVYVLNRDTAARL--TISSPLEAHKSHTIVYSICGIDCGFD 177
             +DP  R  +IG      L  V+  D   +L    +  LE  +   I +       G  
Sbjct: 121 GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GCS 173

Query: 178 NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLG-LNHVSRKWSEP-VDNGANMLV 235
            P    +  D  +A             +++  YE+ L   + V   WS+  +DNGA +L+
Sbjct: 174 RPTIVVLYQDNKDA-------------RHVKTYEVVLKDKDFVEGPWSQNNLDNGAAVLI 220

Query: 236 TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLF 295
            VP       GV++  E  ++Y +         IP R  +    G   V A   R     
Sbjct: 221 PVP---PPLCGVIIIGEETIVYCS---ATAFKAIPVRPSITRAYGR--VDADGSR----- 267

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            +LL    G +  + + H+ E V+ LKI+      + +++  L + +++  S +G+  L 
Sbjct: 268 -YLLGDHAGLLHLLVITHEKERVTGLKIELLGETSIASTISYLDNAFVYIGSSYGDSQLV 326

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
           +   +   PD + S   ++E                      +  +L PI+D  + +L  
Sbjct: 327 K---LNVQPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLER 361

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
           +   Q+ T  G     SLR++R G+ ++E A  +L G+   +W+++ + +D FD ++VVS
Sbjct: 362 QGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVS 420

Query: 476 FNNAT--LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--I 531
           F + T  L +++ + +EE    GF     +L       + L+QV  S +R +    R  +
Sbjct: 421 FISETRILAMNLEDELEETEIEGFNSQVQTLFCHDALFNQLVQVTSSSVRLVSSTTRELL 480

Query: 532 NEWRTPGKRTIVKVGSNRLQVV 553
           NEW  P   +I    +N  Q +
Sbjct: 481 NEWNAPSNYSINVATANASQCI 502


>gi|218199276|gb|EEC81703.1| hypothetical protein OsI_25307 [Oryza sativa Indica Group]
          Length = 1429

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 205/473 (43%), Gaps = 85/473 (17%)

Query: 393 LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ--L 450
           LV    ++++ PI+D+ IA+   E+  Q+F  CG  P  SLR++R G+ V ++  +    
Sbjct: 471 LVHKSAIQNVAPILDLAIADHHGEKQDQMFACCGMCPEGSLRVIRNGVNVEKLLRTDPIY 530

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
            GV + +WT++    D + +++V+SF   T +LS+G +  ++ D+ GF     +LA  L+
Sbjct: 531 HGV-TGLWTLRMKRTDAYHSFLVLSFVEETRILSVGLSFNDICDAVGFQTDVCTLACGLV 589

Query: 510 GDDSLMQVH--------PSGIRH----IREDGRINEWRTPGKRTIVKVGSNRLQVVIALS 557
            D  L+Q+H        P+   H    +       +W      ++  VG N   VV+A S
Sbjct: 590 ADGLLVQIHSKCVKLCLPTACAHPEGTLLPSPVCADWYPDVTISVGAVGHN--VVVVATS 647

Query: 558 GGELIYF-----EVDMTGQLLEVEKHEMSGDVACLDI--------------ASVPEGRKR 598
               +Y            +L E++  ++  +V+C+ I              A+  + RK 
Sbjct: 648 NPCCLYILGVRSLSSFQYELYEIQHVQLHYEVSCISIPQEDWRLDNSSSSCATSGDFRKD 707

Query: 599 -----SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVS------SP-----PESLLFLEV 642
                 +F  +G+++ ++ I+SL+P +  Q L+V  +S      +P     PE++ F+  
Sbjct: 708 FAANIRKFAVIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPENVRFVAA 767

Query: 643 QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL------------SDSRS---- 686
                        A  ++ AGL+NG+L R       G               D  S    
Sbjct: 768 -------------ARFYILAGLRNGMLLRFESQTSKGHCFPGSFYKESSTPCDDTSLMLI 814

Query: 687 --RFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQ 744
             R +G+ P  L  +     A ++ L  RPWL +  R     + +S+    +    SS  
Sbjct: 815 AVRRIGITPVVLVPLHDRANADIIVLGDRPWLLHSARHSLAYSSISFLPASHVTPVSSTD 874

Query: 745 CVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET 797
           C  G++ V+ N L +  +   G+  N     +  TPR+ +     + ++++ T
Sbjct: 875 CPNGLLFVSENCLHLVEMVH-GKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRT 926



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 19/194 (9%)

Query: 12  TGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLA--QFRL 69
           + ++    G F      ++V+ +   LEL+     G ++++     FG I+ +    +R 
Sbjct: 60  SAVLHVAQGCFRSPDCVDVVLCKENSLELVVIGEDGVLQSICEQTTFGIIKDVGVLNWRC 119

Query: 70  TG-------SQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
           T          K+ +V+ SDSG++ +L +    + F  I      K G  R   G+ LA+
Sbjct: 120 THFGLMPKIEGKEILVILSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHRLGRILAI 179

Query: 123 DPKGRAVMIGACEKQKLVYVLNRDTAARL----------TISSPLEAHKSHTIVYSICGI 172
           D + R V + A E +     ++ D                IS+       H  V+S+C I
Sbjct: 180 DRESRFVAVSAYEDEFAFVRVSVDHKLHAPNGEIEEDAKIISTAYNTSSIHGTVWSMCFI 239

Query: 173 DCGFDNPIFAAIEL 186
               D   +  + +
Sbjct: 240 STCLDEEYYPVVAM 253


>gi|297739782|emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 206/466 (44%), Gaps = 64/466 (13%)

Query: 393 LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ--L 450
           LV    ++++ PI+DM + +  +EE  Q+F  CG  P  SLRI+R G++V ++  +    
Sbjct: 454 LVYRSPIQNIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIY 513

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
            G+ +  WTVK  V D + +++V+SF   T VLS+G +  +V+DS GF     +LA  ++
Sbjct: 514 QGI-TGTWTVKMKVIDSYHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGVV 572

Query: 510 GDDSLMQVHPSGIRHIREDGRINEWRTPGKRTI----------VKVGSNRLQVVIALSGG 559
            D  L+Q+H +G++        +    P    I          + +G+    +++  +  
Sbjct: 573 DDGLLVQIHKNGVKLCLPTTVAHPEGIPLASPICTSWFPENISISLGAVGYNLIVVATSS 632

Query: 560 ELIYFEVDMTG------QLLEVEKHEMSGDVACLDIASVPEGRKRSRFLA---------- 603
               F + +        ++ E++   +  +V+C+ I      +K S FL+          
Sbjct: 633 PCFLFILGVRSVSAYQYEIYEMQHVRLQNEVSCISIPHKHFDKKPSTFLSNLVDNSSAAA 692

Query: 604 ------------VGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
                       +G++  ++ ILS  PD+ ++IL+  ++S    + L   V   V  +  
Sbjct: 693 LLIGVNIGRIFVIGTHKPSVEILSFLPDEGLRILASGAIS--LTNTLGTAVSGCVPQDAR 750

Query: 652 ADHPASLFLNAGLQNGVLFR---TVVDMVTGQLSDSRS----------------RFLGLR 692
                  ++ +GL+NG+L R       MV      S S                R +G+ 
Sbjct: 751 LVLVDRFYVLSGLRNGMLLRFELPAASMVFSSELSSHSPSTNINSPVNLQLIAIRRIGIT 810

Query: 693 PPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSV 752
           P  L  +     A ++ LS RPWL    R     T +S++   +     S +C  G++ V
Sbjct: 811 PVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMGILFV 870

Query: 753 AGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETD 798
           A N+L +  +    +  N     L  TPR+ +   + +L++++ T+
Sbjct: 871 AENSLHLVEMVH-SKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTE 915



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 35/277 (12%)

Query: 930  EGKSLELLHKTQVEGIPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLL 975
            E   L L +     G+ LA+C +  R  LA  G               +R + +G+ R +
Sbjct: 1052 EAWQLRLAYTATWPGMVLAICPYLDRYFLASAGNSFYVCGFPNDNPQRVRRFAVGRTRFM 1111

Query: 976  RKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH 1035
                       I+S+  +  RI VGD ++   F  Y  D  +L     D   R +     
Sbjct: 1112 -----------IMSLTAHFTRIAVGDCRDGVVFYSYHEDSRKLEQLYCDPEQRLVADCIL 1160

Query: 1036 IDFDTMAGADKFGNIYFVRLPQDVSDEIE-EDPTGGKIKWEQGKLNGAPNKMEEIVQFHV 1094
            +D DT   +D+ G+I  +     + D    E        +  G++  +  K     +   
Sbjct: 1161 MDVDTAVVSDRKGSIAVLSCSNHLEDNASPECNLTLNCSYYMGEIAMSIKKGSFSYKLPA 1220

Query: 1095 GDVVTSLQKASLVPGGGE-SVIYGTVMGSLGAMLAFSSRDDVDFFSHLE--MHMRQEHPP 1151
             DV+     ++ +    E S++ GT++GS+  ML   SR++ +    ++  + + Q   P
Sbjct: 1221 DDVLKGCDGSNTIIDFSENSIMAGTLLGSI-IMLIPISREEHELLEAVQARLAVHQLTAP 1279

Query: 1152 LCGRDHMAYRSAYFPVK-----DVIDGDLCEQFPTLS 1183
            + G DH  +RS    V+      ++DGD+  QF  L+
Sbjct: 1280 ILGNDHNEFRSRENSVRKAGVSKILDGDMLAQFLELT 1316



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 9/143 (6%)

Query: 14  IIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFR----- 68
           ++  ++G        +IV  +   LEL+     G ++++    +FG I+ LA  R     
Sbjct: 34  VLHVVHGRIRSPSFSDIVFGKETSLELVIIGEDGIVQSVCEQAVFGTIKDLAVLRWNERF 93

Query: 69  ----LTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDP 124
               L    +D +VV SDSG++  L +    + F  +        G  R   GQ LA+D 
Sbjct: 94  HHQNLQMQGRDLLVVVSDSGKLSFLRFCNEMHRFFPVTHVQLSSPGNLRNQLGQMLAIDS 153

Query: 125 KGRAVMIGACEKQKLVYVLNRDT 147
            G  +   A E +  ++ ++  T
Sbjct: 154 NGCFIATSAYEDRLAMFSISMAT 176


>gi|213513485|ref|NP_001135066.1| splicing factor 3B subunit 3 [Salmo salar]
 gi|209738402|gb|ACI70070.1| Splicing factor 3B subunit 3 [Salmo salar]
          Length = 107

 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 55/64 (85%), Positives = 60/64 (93%)

Query: 69  LTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRA 128
           L  S  DYIVVGSDSGRI+ILEY+PSKN+F+KIHQETFGKSGCRRIVPGQ+LAVDPKGRA
Sbjct: 14  LCFSCLDYIVVGSDSGRILILEYHPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRA 73

Query: 129 VMIG 132
           VMIG
Sbjct: 74  VMIG 77


>gi|33146591|dbj|BAC79787.1| putative Splicing factor 3B subunit 3 [Oryza sativa Japonica Group]
 gi|222636635|gb|EEE66767.1| hypothetical protein OsJ_23488 [Oryza sativa Japonica Group]
 gi|429459546|gb|AFZ84679.1| spotted leaf 5 [Oryza sativa Japonica Group]
          Length = 1355

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 204/473 (43%), Gaps = 85/473 (17%)

Query: 393 LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ--L 450
           LV    ++++ PI+D+ IA+   E+  Q+F  CG  P  SLR++R G+ V ++  +    
Sbjct: 471 LVHKSAIQNVAPILDLAIADHHGEKQDQMFACCGMCPEGSLRVIRNGVNVEKLLRTDPIY 530

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
            GV + +WT++    D + +++V+SF   T +LS+G +  ++ D+ GF     +LA  L+
Sbjct: 531 HGV-TGLWTLRMKRTDAYHSFLVLSFVEETRILSVGLSFNDICDAVGFQTDVCTLACGLV 589

Query: 510 GDDSLMQVH--------PSGIRH----IREDGRINEWRTPGKRTIVKVGSNRLQVVIALS 557
            D  L+Q+H        P+   H    +       +W      ++  VG N   VV+A S
Sbjct: 590 ADGLLVQIHSKCVKLCLPTACAHPEGTLLPSPVCADWYPDVTISVGAVGHN--VVVVATS 647

Query: 558 GGELIYF-----EVDMTGQLLEVEKHEMSGDVACLDI--------------ASVPEGRKR 598
               +Y            +L E++  ++  +V+C+ I              A+  + RK 
Sbjct: 648 NPCCLYILGVRSLSSFQYELYEIQHVQLHYEVSCISIPQEDWRLDNSSSSCATSGDFRKD 707

Query: 599 -----SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVS------SP-----PESLLFLEV 642
                 +F  +G+++ ++ I+SL+P +  Q L+V  +S      +P     PE++ F+  
Sbjct: 708 FAANIRKFAVIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPENVRFVAA 767

Query: 643 QASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL------------SDSRS---- 686
                        A  ++ AGL+NG+L R       G               D  S    
Sbjct: 768 -------------ARFYILAGLRNGMLLRFESQTSKGHCFPGSFYKESSTPCDDTSLMLI 814

Query: 687 --RFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQ 744
             R +G+ P  L  +     A ++ L  RPWL    R     + +S+    +    SS  
Sbjct: 815 AVRRIGITPVVLVPLHDRANADIIVLGDRPWLLQSARHSLAYSSISFLPASHVTPVSSTD 874

Query: 745 CVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET 797
           C  G++ V+ N L +  +   G+  N     +  TPR+ +     + ++++ T
Sbjct: 875 CPSGLLFVSENCLHLVEMVH-GKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRT 926



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 48/237 (20%)

Query: 986  TIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD 1045
            TI  + TY  RI VGD ++   F  Y  +  +L +   D   R +     +  +T   +D
Sbjct: 1122 TITCLKTYASRIAVGDCRDGVLFYSYHENLRKLELIYSDPAQRLVGDVALLSCETAVVSD 1181

Query: 1046 KFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKAS 1105
            + G+I  +  P+    E+ E P                  +     F++G+   S+QK +
Sbjct: 1182 RRGSISVLSCPR---LEVSESPE---------------KNLAVHCSFYMGETAMSIQKVA 1223

Query: 1106 -------------LVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQE---- 1148
                         ++      V+  T++GS+  M+  +S +      H  +   QE    
Sbjct: 1224 FKHWLPIDDLTEPVLESVYNCVVASTLLGSIFVMIPLTSEE------HQMLQDVQERLSV 1277

Query: 1149 HP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGE 1200
            HP   PL G DH  +R    P  V  ++DGD+  QF  L+ + Q  + + +  +PG+
Sbjct: 1278 HPLTAPLLGNDHAEFRRRGIPSGVPPILDGDMLVQFLELTSEQQHDVLNIV--SPGK 1332



 Score = 44.7 bits (104), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 19/194 (9%)

Query: 12  TGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLA--QFRL 69
           + ++    G F      ++V+ +   LEL+     G ++++     FG I+ +    +R 
Sbjct: 60  SAVLHVAQGCFRSPDCVDVVLCKENSLELVVIGEDGVLQSICEQTTFGIIKDVGVLNWRC 119

Query: 70  TG-------SQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
           T          K+ +V+ SDSG++ +L +    + F  I      K G  R   G+ LA+
Sbjct: 120 THFGLMPKIEGKEILVILSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHRLGRILAI 179

Query: 123 DPKGRAVMIGACEKQKLVYVLNRDTAARL----------TISSPLEAHKSHTIVYSICGI 172
           D + R V + A E +     ++ D                IS+       H  V+S+C I
Sbjct: 180 DRESRFVAVSAYEDEFAFVRVSVDHKLHAPNGEIEEDAKIISTAYNTSSIHGTVWSMCFI 239

Query: 173 DCGFDNPIFAAIEL 186
               D   +  + +
Sbjct: 240 STCLDEEYYPVVAM 253


>gi|225441567|ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score =  114 bits (285), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/480 (22%), Positives = 208/480 (43%), Gaps = 78/480 (16%)

Query: 393 LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ--L 450
           LV    ++++ PI+DM + +  +EE  Q+F  CG  P  SLRI+R G++V ++  +    
Sbjct: 454 LVYRSPIQNIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIY 513

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
            G+ +  WTVK  V D + +++V+SF   T VLS+G +  +V+DS GF     +LA  ++
Sbjct: 514 QGI-TGTWTVKMKVIDSYHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGVV 572

Query: 510 GDDSLMQVHPSGIRHIREDGRINEWRTPGKRTI----------VKVGSNRLQVVIALSGG 559
            D  L+Q+H +G++        +    P    I          + +G+    +++  +  
Sbjct: 573 DDGLLVQIHKNGVKLCLPTTVAHPEGIPLASPICTSWFPENISISLGAVGYNLIVVATSS 632

Query: 560 ELIYFEVDMTG------QLLEVEKHEMSGDVACLDIASVPEGRKRSRFLA---------- 603
               F + +        ++ E++   +  +V+C+ I      +K S FL+          
Sbjct: 633 PCFLFILGVRSVSAYQYEIYEMQHVRLQNEVSCISIPHKHFDKKPSTFLSNLVDNSSAAA 692

Query: 604 ------------VGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
                       +G++  ++ ILS  PD+ ++IL+  ++S    + L   V   V  +  
Sbjct: 693 LLIGVNIGRIFVIGTHKPSVEILSFLPDEGLRILASGAIS--LTNTLGTAVSGCVPQDAR 750

Query: 652 ADHPASLFLNAGLQNGVLFR------------------------TVVDMVTGQLSDSRS- 686
                  ++ +GL+NG+L R                        +V D  T    +  S 
Sbjct: 751 LVLVDRFYVLSGLRNGMLLRFELPAASMVFSSELSSHSPSVSSCSVNDADTNLSKNINSP 810

Query: 687 --------RFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAA 738
                   R +G+ P  L  +     A ++ LS RPWL    R     T +S++   +  
Sbjct: 811 VNLQLIAIRRIGITPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVT 870

Query: 739 SFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETD 798
              S +C  G++ VA N+L +  +    +  N     L  TPR+ +   + +L++++ T+
Sbjct: 871 PVCSMECPMGILFVAENSLHLVEMVH-SKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTE 929



 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 119/292 (40%), Gaps = 55/292 (18%)

Query: 930  EGKSLELLHKTQVEGIPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLL 975
            E   L L +     G+ LA+C +  R  LA  G               +R + +G+ R +
Sbjct: 1066 EAWQLRLAYTATWPGMVLAICPYLDRYFLASAGNSFYVCGFPNDNPQRVRRFAVGRTRFM 1125

Query: 976  RKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH 1035
                       I+S+  +  RI VGD ++   F  Y  D  +L     D   R +     
Sbjct: 1126 -----------IMSLTAHFTRIAVGDCRDGVVFYSYHEDSRKLEQLYCDPEQRLVADCIL 1174

Query: 1036 IDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPN-KMEEIVQFHV 1094
            +D DT   +D+ G+I  +      S+ +EE   G K        N +P   +     +++
Sbjct: 1175 MDVDTAVVSDRKGSIAVL----SCSNHLEE-LHGFKFLIISCPDNASPECNLTLNCSYYM 1229

Query: 1095 GDVVTSLQKAS-------------------LVPGGGESVIYGTVMGSLGAMLAFSSRDDV 1135
            G++  S++K S                   ++     S++ GT++GS+  ML   SR++ 
Sbjct: 1230 GEIAMSIKKGSFSYKLPADDVLKGCDGSNTIIDFSENSIMAGTLLGSI-IMLIPISREEH 1288

Query: 1136 DFFSHLE--MHMRQEHPPLCGRDHMAYRS--AYFPVKDVIDGDLCEQFPTLS 1183
            +    ++  + + Q   P+ G DH  +RS      V  ++DGD+  QF  L+
Sbjct: 1289 ELLEAVQARLAVHQLTAPILGNDHNEFRSRENSAGVSKILDGDMLAQFLELT 1340



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 9/143 (6%)

Query: 14  IIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFR----- 68
           ++  ++G        +IV  +   LEL+     G ++++    +FG I+ LA  R     
Sbjct: 34  VLHVVHGRIRSPSFSDIVFGKETSLELVIIGEDGIVQSVCEQAVFGTIKDLAVLRWNERF 93

Query: 69  ----LTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDP 124
               L    +D +VV SDSG++  L +    + F  +        G  R   GQ LA+D 
Sbjct: 94  HHQNLQMQGRDLLVVVSDSGKLSFLRFCNEMHRFFPVTHVQLSSPGNLRNQLGQMLAIDS 153

Query: 125 KGRAVMIGACEKQKLVYVLNRDT 147
            G  +   A E +  ++ ++  T
Sbjct: 154 NGCFIATSAYEDRLAMFSISMAT 176


>gi|168031491|ref|XP_001768254.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680432|gb|EDQ66868.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1391

 Score =  114 bits (285), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 123/501 (24%), Positives = 216/501 (43%), Gaps = 118/501 (23%)

Query: 399 VESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ--LPGVPSA 456
           ++++ PI+D  +A+   E+  Q+F   G G   SLR++R G++V ++  +     GV + 
Sbjct: 469 IQNVAPILDFSLADYHNEKQDQMFACSGAGNEGSLRVIRNGISVEKLYTTSPIYQGV-TG 527

Query: 457 VWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLIGDDSLM 515
            +T++    D + A+ V+SF   T VLS+G    +++++ GF     +LA   I D  ++
Sbjct: 528 TYTMRMCCRDPYHAFFVMSFVQETRVLSVGLNFVDITEAVGFQPCASTLACGTIEDYHVV 587

Query: 516 QV--------------HPSGIRHIREDGRI---NEWRTPGKRTIVKVGSNRLQ-VVIALS 557
           QV              HP+GI     D  +   + W+ P +  +V +G+   + +V+ALS
Sbjct: 588 QVCSKEVIVCVPTKTAHPAGI-----DSPLPFCSSWKPP-QGLVVSLGAVASKAIVLALS 641

Query: 558 GGELIYFEVDMTG-----QLLEVEKHEMSGDVACLDI----------------------- 589
              LI       G     +L   ++ E+  +++C+ I                       
Sbjct: 642 KPGLIVMLGSQRGANGALELCMTQQCELKAELSCISIPDEEDWTSSPLPPSIVGLVEGTP 701

Query: 590 -ASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGG 648
            +  P G +  R   VG+++ ++ +LS+ P + +  L+V  +S          + + VG 
Sbjct: 702 KSRNPSGVEVGRICVVGTHEPSVEVLSIVPGEGLAPLAVGHIS----------LVSCVGT 751

Query: 649 EDGADHPAS--------LFLNAGLQNGVLFR---------TVVDMVTGQLSDS------- 684
                 P S        L++ AGL+NG+L R         T+ D  T  LS S       
Sbjct: 752 TLSGCVPESVRLAQFDRLYILAGLRNGMLLRYEWPASSTATLPD-CTNLLSTSDWENIGI 810

Query: 685 -----------------------RSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYI-- 719
                                    R +G+ P  L S+     A ++ LS RPWL     
Sbjct: 811 TQPNLGGDKDVLEDSSPVLLHLVAVRRMGVSPVSLISLQASLSADVIALSDRPWLLQTAR 870

Query: 720 HRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYT 779
           H  R   T +S+ +  +AA  +S  C  G++ VA  +L +  +E L +  N   LPL  T
Sbjct: 871 HSQRIAHTSISFPSSSHAAPVNSVDCPNGILFVADCSLHLVEMEHL-KRLNVQKLPLGRT 929

Query: 780 PRRFVLQPKKKLMVIIETDQG 800
           PRR +   + K ++++ TD G
Sbjct: 930 PRRVLYHTESKTLIVMRTDYG 950



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 10/149 (6%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
           YL    L+    ++ A+ G+     T ++V+ +   LEL+     G ++++    +FG I
Sbjct: 19  YLAKCVLKSSV-VLHAVYGHIRCPSTFDVVLGKETSLELVVVSEDGIVQSVCEQPLFGTI 77

Query: 62  RSLAQFRLTGS---------QKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCR 112
           + L       S         +KD +V+ SDSG++  L +N   + F  +      + G  
Sbjct: 78  KDLRVLPWNESRRSPLPQTYEKDLLVLLSDSGKLSFLTFNVDLHRFLAVVHIHIAECGNL 137

Query: 113 RIVPGQYLAVDPKGRAVMIGACEKQKLVY 141
           R   G+ LA++ +GRAV + A E +  ++
Sbjct: 138 RRELGRLLAIESRGRAVAVAAFEDRIAIF 166


>gi|358348136|ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
 gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
          Length = 1370

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/479 (21%), Positives = 209/479 (43%), Gaps = 91/479 (18%)

Query: 399 VESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEM--AVSQLPGVPSA 456
           ++++ PI D+   +  +E+  Q+F  CG  P  SLR+++ G+ V ++    S   GV + 
Sbjct: 459 IQNIAPIFDVTSGDYHDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGV-AG 517

Query: 457 VWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLIGDDSLM 515
            WTV+  ++D++ +++V+SF   T +LS+G +  +V+DS GF     +LA  L+ D  L+
Sbjct: 518 TWTVRMKISDQYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLV 577

Query: 516 QVHPSGIRHI--REDGR----------INEWRTPGKRTIVKVGSNRLQVVIALSGGELIY 563
           Q++ S ++     +DG              W        +    +   VV   +   L  
Sbjct: 578 QIYQSAVKLCLPTKDGHSEGIPLSSPICTSWYPDNLNISLGAVGHNFIVVSTSNPCFLFI 637

Query: 564 FEVDMTG----QLLEVEKHEMSGDVACLDIASVPEGRKR--------------------- 598
             V M      ++ E++  E+  +V+C+ I     G+KR                     
Sbjct: 638 LGVRMLSAYQYEIYEMQHLELQNEVSCISIPRTKYGKKRSNSSISENNSSMASTVSGVDI 697

Query: 599 SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
           ++   +G++  ++ I S DP+  + +++  ++S          ++++ G       P  +
Sbjct: 698 NKTFVIGTHRPSVEIWSFDPNGGVTVVACGTIS----------LKSTAGTAKSFCIPQDV 747

Query: 659 --------FLNAGLQNGVLFR-------------TVVD--MVTGQLSDSRSRFLGLRPPK 695
                   ++ AGL+NG+L R              VVD  + +  L +S +  + +  P 
Sbjct: 748 RLVFVDKYYVLAGLRNGMLLRFEWPTEPSHSSSINVVDTALSSINLVNSTTMAINVNLPC 807

Query: 696 LFSVVVGGR----------------AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAAS 739
           +  ++   R                A ++ LS RPWL +  R     T +S++   +A  
Sbjct: 808 MLQLIAIRRIGITPVFLVPLDDTLDADIIALSDRPWLLHSARHSISYTSISFQPSSHATP 867

Query: 740 FSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETD 798
             S  C +G++ VA N+L +  +    +  N     L+ TPR+ +   + ++++++ T+
Sbjct: 868 VCSIDCPKGILFVAENSLHLVEM-VYSKRLNMRKFHLKGTPRKVLYHNESQMLLVMRTE 925



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 9/152 (5%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
           Y  S  + + + I+  +  +     + ++V  +   +EL+  +  G ++T+    +FG I
Sbjct: 25  YYLSKCVVRASAILQVLYAHLRSPSSNDVVFGKETSIELVVIDEEGNVQTVCDQPVFGII 84

Query: 62  RSLAQF---------RLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCR 112
           + LA           R     KD +V  SDSG++ +L +    N F  I        G  
Sbjct: 85  KDLAVLPWNDKFCTRRPQTQGKDLLVALSDSGKLSLLTFCNEMNRFFPITHVQLSNPGNI 144

Query: 113 RIVPGQYLAVDPKGRAVMIGACEKQKLVYVLN 144
           R +PG+ LAVD  G  +   A E +  ++ ++
Sbjct: 145 RDLPGRMLAVDSSGCFIAASAYEDRLALFSMS 176



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 36/254 (14%)

Query: 964  LRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFAD 1023
            +R Y +G+ R            +I S+  Y  RI VGD ++   F  Y  +  +L     
Sbjct: 1112 VRKYAVGRTRY-----------SIRSLTAYFSRIAVGDNRDGILFFSYHEEARKLEQLYG 1160

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAP 1083
            D   R +     +D +T   +D+ G+I  +      SD +E  P     +    +L+ A 
Sbjct: 1161 DPSQRLVADCILMDDNTAIVSDRKGSIAVL-----CSDHLEA-PNNASTECNL-RLSCAY 1213

Query: 1084 NKMEEIVQFHVGDVVTSLQKASLVPGG----------GESVIYGTVMGSLGAMLAFSSRD 1133
               E  V    G     L    L+ GG            +++  T++GS+   +  S R+
Sbjct: 1214 FMAEIAVSIRKGSYSYRLPADDLLSGGIGPKTNVDSLQNTILVSTLLGSIMIFIPLS-RE 1272

Query: 1134 DVDFFSHLEMHMRQEH--PPLCGRDHMAYRSAYFPV--KDVIDGDLCEQFPTLSLDLQRK 1189
            + +    ++  +   H   P+ G DH  +RS   PV    ++DGD+  QF  L+   Q  
Sbjct: 1273 EYELLEAVQARLAVHHLTAPVLGNDHNEFRSRENPVGTPKILDGDMLTQFLELTNMQQNN 1332

Query: 1190 IADELDRTPGEILK 1203
            I   L   P +++K
Sbjct: 1333 I---LSMEPLDVVK 1343


>gi|353232348|emb|CCD79703.1| putative dna repair protein xp-E [Schistosoma mansoni]
          Length = 1329

 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 240/1167 (20%), Positives = 432/1167 (37%), Gaps = 211/1167 (18%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            + Y +T Q+PT ++    G+F+      +++ +   +E+      G ++ +    I   I
Sbjct: 3    HFYHVTTQRPTAVVKTCTGHFTSPNDLNLLICKNTYVEVFEVTCEG-LKLVRDVPINAKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILE--YNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             + + FR    + D + + +    + I+E   N     F  +   +      R I  G  
Sbjct: 62   VAASLFRRKDRETDSLFLLTHKAGVAIIECVRNNDSVEFVTVASGSVEDRSARIIDQGFD 121

Query: 120  LAVDPKGRAVMI---GACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            + +DP    +++       K  L+  +          ++ +E      + +       G+
Sbjct: 122  VLIDPGANYIVVRLYHGLLKIILLQCIGEKIGTDFLDTNQIEEGNIVDMAFIY-----GY 176

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDN---GANM 233
              P FA I  D              E   ++  YE+  G   V R     +D+    + +
Sbjct: 177  SLPTFAMIYED--------------ELVLHMKTYEI-YGREPVLRNVQLTLDSIEPDSKL 221

Query: 234  LVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKT 293
            L+ VP       GV++  +N + Y  +  P +   IP+     A+   ++  AA   Q+ 
Sbjct: 222  LIPVP---KPYGGVILVGDNIICYHTKDGPHISQYIPQ-----AKASQVLCYAAVDAQR- 272

Query: 294  LFFFLLQTEYGDIFKVTLEHDN-----------------EHVSELKIKYFDTIPVTASMC 336
               +LL    G ++ V L  ++                   +  ++I+         S+ 
Sbjct: 273  ---YLLGDMAGRLYMVHLLSEDISAAANNGTSNSDSLSAVRIGSIRIELLGETATPESIA 329

Query: 337  VLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI 396
             L +G +F  S  G+  L +   +  DPD E +S   +                     +
Sbjct: 330  YLDNGVVFIGSTLGDSQLIR---LNPDPDPERNSYITI---------------------L 365

Query: 397  EQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSA 456
            E   ++ PI+DM +  L  +   Q+ T  G     SLR++R G+ + E A      +  A
Sbjct: 366  ETYTNIGPIVDMVL--LETKGQNQLITCSGAYKEGSLRVIRNGIGIHEHATIDQDLIKGA 423

Query: 457  VWTVKKNVNDEFDAYIVVSFNNATLVLSIGET-VEEVSDSGF--------------LDTT 501
             W      +D FD  IVVS    T +L + +  +  +   GF               + +
Sbjct: 424  -WCFPIE-SDRFDDTIVVSMVGQTQLLHLADDDITALHLEGFKTDEQTVYCATLSPANDS 481

Query: 502  PSLAVSLIGDDS------LMQVHPSGIRHIR-----EDGRINEWRTPGKRTIVKVGSNRL 550
            P     +I +++      L+Q   SG+R I        G + EW+ P  R I  + S R 
Sbjct: 482  PRPESMMIDENNNTLDPLLLQATTSGLRLIGIQSLCSKGCLTEWKPPTGRGISCLSSFRH 541

Query: 551  QVVIALSGGELIYFEV---DMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY 607
             +V+A SG EL   +V       +  +V   +MS +VAC+D+      R  +   AV S 
Sbjct: 542  TIVVA-SGTELYVLKVVGESNNPKFEQVSHRQMSHEVACIDLTPFNRDRAIAAINAVSS- 599

Query: 608  DNTIRILSLDPDDCMQIL---------SVQSVSSPPESLLFLEVQASVGGEDG-ADHPAS 657
            ++     S  PD  +  L          +  +  P   L+  E         G A  P S
Sbjct: 600  NHLDSTSSSTPDKSVPYLVAVGLWLGHGLALLKLPNLELVHEEPLPETTASTGTALLPRS 659

Query: 658  L---------FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG----- 703
            +         +L A + +G L+   +        D     + LR PK  S   G      
Sbjct: 660  VLIAQLEDIAYLFAAMGDGTLYFYTI--------DPSEDHVCLRDPKRVSAGTGPSMFLR 711

Query: 704  ------RAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
                  +  +   S+ P + Y  + + +   L+ + + +    +     + +  V   AL
Sbjct: 712  QWRSQRKVNVFVCSNHPCVIYSIKNKLIFANLNLKEVNFMTPLNGLFYSDCIALVTPTAL 771

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
             + +++ + +  +   LPL  TP+R  LQ +   + +I               ++E F+ 
Sbjct: 772  IIGSVDEI-QKLHVRTLPLEETPKRLALQSETSSLGVI-------------TYRQEMFQ- 816

Query: 818  AGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
             GMG         + +    ++  P S  +   PK       +  R    R    + LL 
Sbjct: 817  EGMG------FKPVRSSISLSQKIPKSASR--LPKTAPSSVSATERKF--REIEVSSLLI 866

Query: 878  L-QDN----------------EAAFSICTVNFHDKEHGTLLAVGTAKGL--QFWPKRNIV 918
              Q N                E A SI +V   D  +G L AVGTA  +  +  P +   
Sbjct: 867  FNQSNLEIQFAHNFYFSQTLVEVAVSIASVQ-SDIHNGPLFAVGTAFLVEDEVEPSK--- 922

Query: 919  AGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC 978
             G IH++R+  E   L+ +    V G    +  F GRLLA I   +RL+D+ +  L   C
Sbjct: 923  -GRIHLFRWDPESSRLDTVLVHDVNGSVYRIVDFNGRLLAAINSSVRLFDIKEDSLRLAC 981

Query: 979  ENKLFPNTIVSINTYR--DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI 1036
                F   I+ +   R  D + VGD+  S     ++ + N          PRW T    +
Sbjct: 982  S---FNENIIVLFLRRKGDFVLVGDLMRSLTLLLFKSNVNNFEAIGRHRHPRWTTCIEIL 1038

Query: 1037 DFDTMAGADKFGNIYFVR--LPQDVSD 1061
            D +    A+   N++ V   LP++  +
Sbjct: 1039 DDEHFLAAEVENNLFVVSRDLPENTKE 1065


>gi|256088964|ref|XP_002580590.1| DNA repair protein xp-E [Schistosoma mansoni]
          Length = 1329

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 240/1167 (20%), Positives = 432/1167 (37%), Gaps = 211/1167 (18%)

Query: 2    YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
            + Y +T Q+PT ++    G+F+      +++ +   +E+      G ++ +    I   I
Sbjct: 3    HFYHVTTQRPTAVVKTCTGHFTSPNDLNLLICKNTYVEVFEVTCEG-LKLVRDVPINAKI 61

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILE--YNPSKNVFDKIHQETFGKSGCRRIVPGQY 119
             + + FR    + D + + +    + I+E   N     F  +   +      R I  G  
Sbjct: 62   VAASLFRRKDRETDSLFLLTHKAGVAIIECVRNNDSVEFVTVASGSVEDRSARIIDQGFD 121

Query: 120  LAVDPKGRAVMI---GACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
            + +DP    +++       K  L+  +          ++ +E      + +       G+
Sbjct: 122  VLIDPGANYIVVRLYHGLLKIILLQCIGEKIGTDFLDTNQIEEGNIVDMAFIY-----GY 176

Query: 177  DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDN---GANM 233
              P FA I  D              E   ++  YE+  G   V R     +D+    + +
Sbjct: 177  SLPTFAMIYED--------------ELVLHMKTYEI-YGREPVLRNVQLTLDSIEPDSKL 221

Query: 234  LVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKT 293
            L+ VP       GV++  +N + Y  +  P +   IP+     A+   ++  AA   Q+ 
Sbjct: 222  LIPVP---KPYGGVILVGDNIICYHTKDGPHISQYIPQ-----AKASQVLCYAAVDAQR- 272

Query: 294  LFFFLLQTEYGDIFKVTLEHDN-----------------EHVSELKIKYFDTIPVTASMC 336
               +LL    G ++ V L  ++                   +  ++I+         S+ 
Sbjct: 273  ---YLLGDMAGRLYMVHLLSEDISAAANNGTSNSDSLSAVRIGSIRIELLGETATPESIA 329

Query: 337  VLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI 396
             L +G +F  S  G+  L +   +  DPD E +S   +                     +
Sbjct: 330  YLDNGVVFIGSTLGDSQLIR---LNPDPDPERNSYITI---------------------L 365

Query: 397  EQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSA 456
            E   ++ PI+DM +  L  +   Q+ T  G     SLR++R G+ + E A      +  A
Sbjct: 366  ETYTNIGPIVDMVL--LETKGQNQLITCSGAYKEGSLRVIRNGIGIHEHATIDQDLIKGA 423

Query: 457  VWTVKKNVNDEFDAYIVVSFNNATLVLSIGET-VEEVSDSGF--------------LDTT 501
             W      +D FD  IVVS    T +L + +  +  +   GF               + +
Sbjct: 424  -WCFPIE-SDRFDDTIVVSMVGQTQLLHLADDDITALHLEGFKTDEQTVYCATLSPANDS 481

Query: 502  PSLAVSLIGDDS------LMQVHPSGIRHIR-----EDGRINEWRTPGKRTIVKVGSNRL 550
            P     +I +++      L+Q   SG+R I        G + EW+ P  R I  + S R 
Sbjct: 482  PRPESMMIDENNNTLDPLLLQATTSGLRLIGIQSLCSKGCLTEWKPPTGRGISCLSSFRH 541

Query: 551  QVVIALSGGELIYFEV---DMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY 607
             +V+A SG EL   +V       +  +V   +MS +VAC+D+      R  +   AV S 
Sbjct: 542  TIVVA-SGTELYVLKVVGESNNPKFEQVSHRQMSHEVACIDLTPFNRDRAIAAINAVSS- 599

Query: 608  DNTIRILSLDPDDCMQIL---------SVQSVSSPPESLLFLEVQASVGGEDG-ADHPAS 657
            ++     S  PD  +  L          +  +  P   L+  E         G A  P S
Sbjct: 600  NHLDSTSSSTPDKSVPYLVAVGLWLGHGLALLKLPNLELVHEEPLPETTASTGTALLPRS 659

Query: 658  L---------FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGG----- 703
            +         +L A + +G L+   +        D     + LR PK  S   G      
Sbjct: 660  VLIAQLEDIAYLFAAMGDGTLYFYTI--------DPSEDHVCLRDPKRVSAGTGPSMFLR 711

Query: 704  ------RAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNAL 757
                  +  +   S+ P + Y  + + +   L+ + + +    +     + +  V   AL
Sbjct: 712  QWRSQRKVNVFVCSNHPCVIYSIKNKLIFANLNLKEVNFMTPLNGLFYSDCIALVTPTAL 771

Query: 758  RVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEA 817
             + +++ + +  +   LPL  TP+R  LQ +   + +I               ++E F+ 
Sbjct: 772  IIGSVDEI-QKLHVRTLPLEETPKRLALQSETSSLGVI-------------TYRQEMFQ- 816

Query: 818  AGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLE 877
             GMG         + +    ++  P S  +   PK       +  R    R    + LL 
Sbjct: 817  EGMG------FKPVRSSISLSQKIPKSASR--LPKTAPSSVSATERKF--REIEVSSLLI 866

Query: 878  L-QDN----------------EAAFSICTVNFHDKEHGTLLAVGTAKGL--QFWPKRNIV 918
              Q N                E A SI +V   D  +G L AVGTA  +  +  P +   
Sbjct: 867  FNQSNLEIQFAHNFYFSQTLVEVAVSIASVQ-SDIHNGPLFAVGTAFLVEDEVEPSK--- 922

Query: 919  AGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC 978
             G IH++R+  E   L+ +    V G    +  F GRLLA I   +RL+D+ +  L   C
Sbjct: 923  -GRIHLFRWDPESSRLDTVLVHDVNGSVYRIVDFNGRLLAAINSSVRLFDIKEDSLRLAC 981

Query: 979  ENKLFPNTIVSINTYR--DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI 1036
                F   I+ +   R  D + VGD+  S     ++ + N          PRW T    +
Sbjct: 982  S---FNENIIVLFLRRKGDFVLVGDLMRSLTLLLFKSNVNNFEAIGRHRHPRWTTCIEIL 1038

Query: 1037 DFDTMAGADKFGNIYFVR--LPQDVSD 1061
            D +    A+   N++ V   LP++  +
Sbjct: 1039 DDEHFLAAEVENNLFVVSRDLPENTKE 1065


>gi|390366809|ref|XP_780126.3| PREDICTED: DNA damage-binding protein 1-like isoform 1
            [Strongylocentrotus purpuratus]
          Length = 630

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 134/577 (23%), Positives = 234/577 (40%), Gaps = 104/577 (18%)

Query: 659  FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGY 718
            ++   L +G LF   ++  TG ++D +   LG +P  L +        +   S RP + Y
Sbjct: 86   YILCALGDGSLFYFQLNAETGYMTDRKKVILGTQPTVLKTFKSLSTVNVFACSDRPTVIY 145

Query: 719  IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRY 778
                + + + ++ + + Y    +SD   + +       L + +I+ + +    T +PL  
Sbjct: 146  SSNHKLVFSNVNLKEVSYMCPLNSDGYPDSLALCNDTTLMIGSIDEIQKLHIRT-VPLGE 204

Query: 779  TPRRFVLQPKKKLMVIIET-----DQGALTA---EEREAAKKECFEAAGMGENGNGNM-- 828
            TP R   Q   +   II T     D    TA   + R++A          G  GN  M  
Sbjct: 205  TPLRITYQEPSQTFGIISTRTDVVDSSGTTASMGQTRQSASTSALNITKSG--GNKGMAG 262

Query: 829  ------------DQMENGD----DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANT 872
                        D++E       D++ ++ L    +G  +  +   +SC    DP     
Sbjct: 263  QAGGSGEGSSFGDEVEVHSLLVIDQHTFEVLHAHHFGSSEYAT-SLISCKLCNDPNWYYI 321

Query: 873  TCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK 932
              L  +  +EA                             PK    +G I ++++  +GK
Sbjct: 322  VGLANVHPDEAE----------------------------PK----SGRIVVFQY-SDGK 348

Query: 933  SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI-VSIN 991
              E+  K +++G P +L +F G+LLA +  V+RL++   +  LR  E   + N + + + 
Sbjct: 349  LQEIAEK-EIKGAPYSLVEFNGKLLASVNSVVRLFEWTPEHSLR-VECSHYNNVLALYLK 406

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E  L   A D  P W++A   +D DT  GA+   N++
Sbjct: 407  TKGDFIVVGDLMRSITLLAYKPMEGCLEEIARDYSPNWMSAVEILDDDTFLGAENSSNLF 466

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
              +  +D +   +E+                   ++E+  FH+G+ V   +  SLV    
Sbjct: 467  TCQ--KDSAATTDEE----------------RRHLQEVGLFHLGEFVNVFRHGSLVMQNI 508

Query: 1108 -----PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
                 P  G SV++GTV GS+G +    + +   F   ++  + +    +    H  +RS
Sbjct: 509  GESTIPTTG-SVLFGTVSGSVGLVTQL-NEEFYRFLLEVQNKLTKVIKSVGKIKHSFWRS 566

Query: 1163 AYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADEL 1194
             Y      P+ + IDGDL E F    LDL R   DE+
Sbjct: 567  FYSERKTEPMDNFIDGDLLESF----LDLSRDTMDEV 599


>gi|47201745|emb|CAF89435.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 179

 Score =  110 bits (274), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 65/183 (35%), Positives = 98/183 (53%), Gaps = 32/183 (17%)

Query: 707 MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLG 766
           +L +SSR WL Y ++ RF LTPLSYETLE                       +  +E+LG
Sbjct: 24  VLAMSSRSWLSYSYQSRFHLTPLSYETLE-----------------------ILALEKLG 60

Query: 767 ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALT----AEEREAAKKECFEAAGMGE 822
             FN+ A PL+YTPR+FV+ P+   +V+IE+D  A T    A+ ++   +E  EAAG  E
Sbjct: 61  AVFNQVAFPLQYTPRKFVIHPETNNLVLIESDHNAYTEATKAQRKQQMAEEMVEAAGEDE 120

Query: 823 NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNE 882
                 +      +EN    L +  +G PKA + +W S +R+++P   +T   ++L+ NE
Sbjct: 121 RELA-AEMAAAFLNEN----LPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNE 175

Query: 883 AAF 885
           AAF
Sbjct: 176 AAF 178


>gi|402583173|gb|EJW77117.1| hypothetical protein WUBG_11977, partial [Wuchereria bancrofti]
          Length = 200

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 7/194 (3%)

Query: 792 MVIIETDQGALTA----EEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQ 847
           ++IIE D  A T     E R+    E  E A   E  +     ++   D  + + + +  
Sbjct: 10  LIIIENDHAAFTVKGKMERRKQLADELMEVAKEAEEAD--QQAVKEMADAIRTEKVDERV 67

Query: 848 YGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAK 907
           YG PK +  KW S +RV+      T       ++EAAF+I  V F ++     + VG   
Sbjct: 68  YGSPKNQKGKWASTVRVMRSNDGETLSHFPFAEDEAAFAIAMVQFQNQSDTQFVLVGCGC 127

Query: 908 GLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY 967
            LQ  P R    G I+ +     G +L+LLH+T  + +  A+  F+G  LAG+G  +RLY
Sbjct: 128 DLQLKP-RKANGGCIYTFLLAANGTTLQLLHRTPTDEVVNAIHDFRGMALAGVGKKVRLY 186

Query: 968 DLGKKRLLRKCENK 981
           DLGK++LL KCEN+
Sbjct: 187 DLGKRKLLAKCENR 200


>gi|30681985|ref|NP_850565.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein [Arabidopsis thaliana]
 gi|332641609|gb|AEE75130.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein [Arabidopsis thaliana]
          Length = 1329

 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 113/488 (23%), Positives = 208/488 (42%), Gaps = 91/488 (18%)

Query: 389 GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVS 448
           G + L  +  ++++ PI+D  + +   E+  QIF  CG  P  SLRI+R G+ V ++   
Sbjct: 398 GTEKLHWMSSIQNIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKL--- 454

Query: 449 QLPGVP-----SAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTP 502
            L   P     +  WTVK  + D + +++V+SF   T VLS+G + ++V+DS GF     
Sbjct: 455 -LKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVC 513

Query: 503 SLAVSLIGDDSLMQVHPSGIR------HIREDG------RINEWRTPGKRTIV--KVGSN 548
           + A  L+ D  L+Q+H   IR          DG        + W  P   +I    VG N
Sbjct: 514 TFACGLVADGLLVQIHQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPENVSISLGAVGQN 572

Query: 549 RLQVVIALSGGELIYFEV-------DMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR- 600
               +I +S     +  +           ++ E+++  +  +V+C+ +     G+KRSR 
Sbjct: 573 ----LIVVSTSNPCFLSILGVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSRD 628

Query: 601 --------------------FLAVGSYDNTIRILSLDPDDC-MQILSVQSVSSPPESLLF 639
                               FL +G++  ++ +LS   D   +++L+   VS    + + 
Sbjct: 629 SSPDNFCKAAIPSAMEQGYTFL-IGTHKPSVEVLSFTEDGVGVRVLASGLVSL--TNTMG 685

Query: 640 LEVQASVGGEDGADHPASLFLNAGLQNGVLFR----------------------TVVDMV 677
             +   +  +        L++ +GL+NG+L R                        +D V
Sbjct: 686 TVISGCIPQDVRLVLVDQLYVLSGLRNGMLLRFEWAPFSNSSGLNCPDYFSHCKEEMDTV 745

Query: 678 TGQLSD-------SRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLS 730
            G+  +         +R +G+ P  L        + ++ LS RPWL    R     T +S
Sbjct: 746 VGKKDNLPVNLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWLLQTARQSLSYTSIS 805

Query: 731 YETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
           ++   +A    S +C +G++ V+ N L +  +    +  N     L  TPR+ +   + K
Sbjct: 806 FQPSTHATPVCSFECPQGILFVSENCLHLVEMVH-SKRRNAQKFQLGGTPRKVIYHSESK 864

Query: 791 LMVIIETD 798
           L++++ TD
Sbjct: 865 LLIVMRTD 872



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 123/303 (40%), Gaps = 51/303 (16%)

Query: 930  EGKSLELLHKTQVEGIPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLL 975
            E   L L   T   G+ LA+C +     LA  G               ++ + +G+ R +
Sbjct: 1008 ETWQLRLASSTTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFM 1067

Query: 976  RKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH 1035
                       I S+ TY  RI VGD ++   F  Y  +  +L+    D   R +     
Sbjct: 1068 -----------ITSLRTYFTRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFL 1116

Query: 1036 IDFDTMAGADKFGNI--------------YFVRLPQDVSD-EIEEDPTGGKIKWEQGKLN 1080
            +D +++A +D+ G+I              + V++P D  +    E        +  G++ 
Sbjct: 1117 MDANSVAVSDRKGSIAILSCKDHSDFGMKHLVKIPHDNPEYSSPESNLNLNCAYYMGEIA 1176

Query: 1081 GAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSH 1140
             +  K   I +    DV+ S   +  +    +++I GT++GS+      SS ++ +    
Sbjct: 1177 MSIKKGCNIYKLPADDVLRSYGLSKSIDTADDTIIAGTLLGSIFVFAPISS-EEYELLEG 1235

Query: 1141 LEMHMRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLSLDLQRKIADELD 1195
            ++  +   HP   P+ G DH  +R    P   + ++DGD+  QF    L+L  +  + + 
Sbjct: 1236 VQAKLGI-HPLTAPVLGNDHNEFRGRENPSQARKILDGDMLAQF----LELTNRQQESVL 1290

Query: 1196 RTP 1198
             TP
Sbjct: 1291 STP 1293


>gi|297829750|ref|XP_002882757.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328597|gb|EFH59016.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1384

 Score =  109 bits (273), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 113/491 (23%), Positives = 209/491 (42%), Gaps = 97/491 (19%)

Query: 389 GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVS 448
           G + L  +  ++++ PI+D  + +   E+  QIF  CG     SLRI+R G+ V ++   
Sbjct: 453 GSEKLHWMSSIQNIAPILDFSVMDDQNEKRDQIFACCGVTREGSLRIIRSGINVEKL--- 509

Query: 449 QLPGVP-----SAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTP 502
            L   P     +  WTVK  + D + +++V+SF   T VLS+G + ++V+DS GF     
Sbjct: 510 -LKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVC 568

Query: 503 SLAVSLIGDDSLMQVHPSGIR------HIREDG------RINEWRTPGKRTIV--KVGSN 548
           +LA  L+ D  L+Q+H   IR          DG        + W  P   +I    VG N
Sbjct: 569 TLACGLVADGLLVQIHQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPDNVSISLGAVGQN 627

Query: 549 RLQVVIALSGGELIYFEV-------DMTGQLLEVEKHEMSGDVACLDI------------ 589
               +I +S     +  +           ++ E+++  +  +V+C+ +            
Sbjct: 628 ----LIVVSTSNPCFLSILGVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSCA 683

Query: 590 --------ASVPEGRKRSRFLAVGSYDNTIRILSLDPDDC-MQILSVQSVSSPPESLLFL 640
                   A++P G ++     +G++  ++ +LS   D   +++L+   VS      L  
Sbjct: 684 SSPDNSCKAAIPSGMEQGYSFLIGTHKPSVEVLSFSEDGVGVRVLASGLVS------LTN 737

Query: 641 EVQASVGGEDGADHPA----SLFLNAGLQNGVLFR----------------------TVV 674
            + A + G    D        L++ +GL+NG+L R                        +
Sbjct: 738 TMGAVISGCIPQDVRLVLVDQLYVLSGLRNGMLLRFEWPLFSNASGLNCPDYFSYCKEEM 797

Query: 675 DMVTGQLSD-------SRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLT 727
           D+V G+  +         +R +G+ P  L        + ++ LS RPWL    R     T
Sbjct: 798 DIVVGKKDNLPINLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWLLQTARQSLSYT 857

Query: 728 PLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQP 787
            +S++   +A    S +C +G++ V+ N L +  +    +  N     L  TPR+ +   
Sbjct: 858 SISFQPSTHATPVCSSECPQGILFVSENCLHLVEMVH-SKRRNAQKFHLGGTPRKVIYHS 916

Query: 788 KKKLMVIIETD 798
           + KL++++ TD
Sbjct: 917 ESKLLIVMRTD 927



 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 49/296 (16%)

Query: 930  EGKSLELLHKTQVEGIPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLL 975
            E   L L   T   G+ LA+C +     LA  G               ++ + +G+ R +
Sbjct: 1063 ETWQLRLASATTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFM 1122

Query: 976  RKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH 1035
                       I S+ TY  RI VGD ++   F  Y  +  +L+    D   R +     
Sbjct: 1123 -----------ITSLRTYFTRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFL 1171

Query: 1036 IDFDTMAGADKFGNIYFVRLPQDVSD--------EIEEDPTGG--------KIKWEQGKL 1079
            +D +++A +D+ G+I  +   QD S+           +DP              +  G++
Sbjct: 1172 MDANSVAVSDRKGSIAILSC-QDHSEFGTKHLAFSPRDDPEYSSPESNLNLNCAYYMGEI 1230

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFS 1139
              A  K   I +    DV+ S   +  +    +++I GT++GS+      SS ++ +   
Sbjct: 1231 AMAIKKGCNIYKLPADDVLRSYGLSKSIDTADDTIIAGTLLGSIFVFAPISS-EEYELLE 1289

Query: 1140 HLEMHMRQEHP---PLCGRDHMAYRSAYFPVK--DVIDGDLCEQFPTLSLDLQRKI 1190
             ++  +   HP   P+ G DH  +R    P +   ++DGD+  QF  L+   Q  +
Sbjct: 1290 AVQAKLGI-HPLTAPVLGNDHNEFRGRENPSQATKILDGDMLAQFLELTNRQQESV 1344



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 25/200 (12%)

Query: 10  QPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQF-- 67
           +P+ ++    G F    + +IV  +   +EL+     G +E++    +FG I+ LA    
Sbjct: 43  RPSVVLQVAYGYFRSLSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTIKDLAVIPQ 102

Query: 68  --RLTGSQ----KDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLA 121
             +L  +     KD + V SDSG +  L ++   + F  I        G  RI  G+ L 
Sbjct: 103 SSKLYSNSLQMGKDLLAVLSDSGNLSFLSFSNEMHRFSPIQHVQLSTPGNSRIQLGRMLT 162

Query: 122 VDPKGRAVMIGACEKQKLVYVLNRDTAARLT---ISSPLE-------AHKSHTIVYSICG 171
           +D  G  + + A   +  ++ L+  +   +    IS P E              ++S+C 
Sbjct: 163 IDSSGLFLAVSAYHDRFALFSLSTSSMGDIIHERISYPSEDGGNGSSVQAISGTIWSMCF 222

Query: 172 IDCGFDN-------PIFAAI 184
           I   F++       P+FA +
Sbjct: 223 ISKDFNDSESKEYAPVFAIV 242


>gi|345570887|gb|EGX53705.1| hypothetical protein AOL_s00006g33 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1133

 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 265/1279 (20%), Positives = 491/1279 (38%), Gaps = 224/1279 (17%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFGAI 61
            Y   + + + I  AI  +F       +V+A+   +E+  L PE    +E +    ++G +
Sbjct: 3    YLAPIHRASSIRHAIKCHFIHADKESLVIAKSNRIEVYDLIPEG---LEQVAHFAVYGRV 59

Query: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIV-PGQ-- 118
              L   R   S  D++ +G+D      + ++        I  E        R   P Q  
Sbjct: 60   TGLLSLRPQQSTLDHLFLGTDRYEYFTVSWDSQTGT---IRNERKAHDVTDRFQRPAQVG 116

Query: 119  --YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARL-----------TISSPLEAHKSHTI 165
              YLA DP GR + +   E       + R +  R             +  P     +   
Sbjct: 117  HLYLA-DPGGRLLGLYLYEGIFTAIPIKRQSKGRGRHAQLPEAEIGNLDDPCPIRMNELK 175

Query: 166  VYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVS----R 221
            V ++  +  G   P+ A +  D             S+   +L  YEL++    V      
Sbjct: 176  VINMVFL-YGTSVPVIAVLYTD-------------SKKLVHLITYELNVAKRAVKDPEFA 221

Query: 222  KW---SEPVDNGANMLVTVPGGGDGPSG-VLVCAENFVIYKNQGHPDVRAVIPRRADLPA 277
            +W   +  +D+GA +L+ V    D P+G +LV  E  V Y    HP+    +P +  L  
Sbjct: 222  QWGIKANNLDHGAKLLIPV----DNPTGGILVIGEQVVSYF---HPE--RTVPMKKPLHE 272

Query: 278  ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCV 337
                   S  TH +     +LL  E G ++ + L  +N  +  ++I+    +    ++  
Sbjct: 273  P-----TSFVTHGKIDPERYLLSDELGHLYLLLLIIENNKLINMRIENLGEVCQARAIVY 327

Query: 338  LKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIE 397
            L +GY+F  S FG+  L +  + G  P +E   S                  L NL  I 
Sbjct: 328  LDNGYVFLGSHFGDSTLVRISSKG--PRIEVVQS------------------LPNLAPIS 367

Query: 398  QVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMA-VSQLPGVPSA 456
                L   +     + +      I T  G      LR +R G+ + ++  + ++ GV + 
Sbjct: 368  DFIVLGTEVGGVEIHQYSAGQTMILTCSGGFYDGGLRSVRSGVGIRDIGLLGEMSGVQN- 426

Query: 457  VWTVKKNVNDE-FDAYIVVSFNNATLVLSIGE--TVEEVS--DSGFLDTTPSLAVSLIGD 511
            +W +K+ + D  FD  ++ SF N +   + G    VEEV   ++ FLDTT +L    +G+
Sbjct: 427  MWALKRAILDNGFDDTLLFSFANESRAFAFGADGEVEEVDTFENFFLDTT-TLEAGNVGN 485

Query: 512  DSLMQVHPSGIRHI-REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG 570
            D L+QV P  +  + +   ++  W  P    IV    +  ++V+ L+G   + F++  + 
Sbjct: 486  DKLVQVTPFKVIVVEKATSKLWNWAPPVGAKIVMASLSGARLVVVLNGRICLLFDLS-SE 544

Query: 571  QLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCM--QILSV 627
             + ++       +++C+ I +     K+S FL VG +   ++ +L +   + M  + L+V
Sbjct: 545  PIKQIANRTFENEISCIHIPT-----KQSDFLVVGFWMPASLALLRIADLETMKEEHLAV 599

Query: 628  QSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSR 687
                S P S++   ++         D P+SLF+  G+ +G +    +    G L D +  
Sbjct: 600  FE-GSVPRSVMVANME--------GDGPSSLFV--GMADGEVISYTITEGPGILDDQKRI 648

Query: 688  FLGLRPPKLFSV---VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQ 744
             LG +     ++        + ++    RP + Y   GR + + ++        +F+++ 
Sbjct: 649  RLGTQTVTFEALPRKTGDDSSCVIATGERPTMVYGEEGRTVYSAITLNQASSVVAFNAEA 708

Query: 745  CVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTA 804
              + VV     ++ +  I+    T    + PL    RR     +KK   +        T 
Sbjct: 709  FPDTVVVATDESVFIAKIDEARTTHTRMS-PLCQFARRVAFSKEKKAYGVATIRNSIDTT 767

Query: 805  EEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRV 864
               E++   C+                    DEN YD + D    YP  E  + + C  +
Sbjct: 768  TGMESSS--CYIHV----------------IDENFYDKI-DAYELYPN-ELVESLLCASL 807

Query: 865  LDPRSANTTCLLELQDNEAAFSICTVNFHD---KEHGTLLAVGTAKGLQFWPKRNIVAGY 921
             +P    +            F + T   +D    EHG LL                    
Sbjct: 808  ANPDGTIS----------EKFVVGTAIGNDSDESEHGRLL-------------------- 837

Query: 922  IHIYRFVEEG--KSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKR-----L 974
                 F+E G  K L L+ + ++ G   +L   +G +LAG+   + LY     R      
Sbjct: 838  -----FLELGADKMLRLITELELPGACHSLAIVKGYILAGLSKSIDLYRFSYTRGSLGAS 892

Query: 975  LRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKY----RRDENQLYIFADDSVPRWL 1030
            +++  +       VS++ Y  R++VGD+ +     +         ++L          W+
Sbjct: 893  IQQISSIRAATLPVSLSVYGKRVFVGDLVKGVMVLEVVEGGGEGNDKLVEVCRQYGVSWV 952

Query: 1031 TAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV 1090
            TA   +D DT   AD  GN+  +R                  +   G  +    +M  + 
Sbjct: 953  TALEALDEDTCISADSDGNLVLLR------------------RESTGATDEDTRRMRPLS 994

Query: 1091 QFHVGDVVTSLQKASLVPGGGESV----IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR 1146
            +  +G++V  +++ +     G  V      GTV G L  ML     D  D     +++M 
Sbjct: 995  EIRLGEMVNCIRRVNDPITQGYVVQPKAYLGTVDGGL-FMLGLIHPDYFDILMKCQVNMA 1053

Query: 1147 QEHPPLCGRDHMAYRSAYFPVKDV--------IDGDLCEQFPTLSLDLQRKIAD------ 1192
            +    +   D   YR+  +  K +        +DG+L E+F  L  D  R + D      
Sbjct: 1054 KVIKGIGDLDFNRYRA--YNTKGIQPEEPFRFVDGELVEKFLDLDEDAMRMVIDGANDDD 1111

Query: 1193 --ELDRTPGEILKKLEEIR 1209
              +++ T GE+   +E ++
Sbjct: 1112 NSQIECTVGEMKNIVETLK 1130


>gi|312076590|ref|XP_003140929.1| CPSF A subunit region family protein [Loa loa]
          Length = 655

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 153/662 (23%), Positives = 273/662 (41%), Gaps = 74/662 (11%)

Query: 551  QVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNT 610
            Q+VIA  G  LIY E D  G  L + + E   +++C+DI  +     RS   AVG + + 
Sbjct: 7    QLVIA-CGALLIYLEADSAGFKL-ISELECEFEISCIDITPIGNETLRSEICAVGYWTDL 64

Query: 611  IRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLF 670
               L   P    Q++ V     P + L    + + + G         ++L   L +G + 
Sbjct: 65   SVALRTLP----QLMEVVREKIPGDMLSRSIMLSPMEGH--------VYLLVALGDGTVH 112

Query: 671  RTVVDMVTGQLSDSRSRFLGLRPPKL--FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTP 728
               +DM TG L D +   LG +P  L  F         +   S RP + Y    + L + 
Sbjct: 113  YFQIDMKTGALLDPKKATLGTQPIHLRKFRSRCSSVHNIFVCSDRPAVIYSSNQKLLFSN 172

Query: 729  LSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPK 788
            ++   +       ++   + +V   GN+L +  I+ + +    T +PL  +P R   QP 
Sbjct: 173  VNLRMVSTMTPLYAEAYPDALVLTDGNSLVIGRIDDIQKLHIRT-VPLGESPSRIAYQP- 230

Query: 789  KKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQY 848
                   ET+  A+T E  E           MG++  G     +N  + +     S  + 
Sbjct: 231  -------ETNTIAVTVERLEFVD-------AMGKHHFGQCAS-KNAMETSSSRLSSMRRE 275

Query: 849  GYPKAESDKW-VSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAK 907
              P+  +++  VS I +LD  +       EL+ +E A S+ +    +        VGTA 
Sbjct: 276  PTPECLAEEMEVSSILLLDSNTFEILHSHELEGSEMAMSLASCQLGNDSQ-PYFVVGTAV 334

Query: 908  GLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY 967
             +    +  +  G I +++  E  + + L+++ +++G   ++    G+L+  +   +RL+
Sbjct: 335  IMSDETESKM--GRIMMFQASEGPERMRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLF 392

Query: 968  DLGKKRLLR-KCENKLFPN-TIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDS 1025
            +    + LR +C +  F N T + + T  D I VGD+  S     Y+  E+     A D 
Sbjct: 393  EWTADKELRLECSD--FDNVTALYLKTKNDLILVGDLMRSLSLLSYKSVESTFEKVARDF 450

Query: 1026 VPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNK 1085
            +  W++A   ID D+  GA+   N++ V     V D          +  E+G       +
Sbjct: 451  MTNWMSACEIIDSDSFLGAENSYNLFTV-----VKDSF-------TVFKEEG------TR 492

Query: 1086 MEEIVQFHVGDVVTSLQKASLV-------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFF 1138
            ++E+  F++G++V      SL        P    S++YGT  G +G ++       +  F
Sbjct: 493  LQELGLFYLGEMVNVFCHGSLTATQVDVAPLYHSSILYGTSDGGIGVIVQMPPV--LYTF 550

Query: 1139 SHLEMHMRQEHPPLCGR-DHMAYRSAYFPVKD-----VIDGDLCEQFPTLSLDLQRKIAD 1192
             H       ++   C R  H  YR+     +       IDGDL E    +  D   +I +
Sbjct: 551  LHDVQKRLADYTENCMRISHTQYRTFETEKRSEVPNGFIDGDLIESLLDMGKDSVGQIVN 610

Query: 1193 EL 1194
             L
Sbjct: 611  GL 612


>gi|311257043|ref|XP_003126928.1| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
          Length = 72

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 59/69 (85%)

Query: 1143 MHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEIL 1202
            MH+R EHPPLCGRDH+++RS YFPVK+VIDGDLCEQF ++  + Q+ +++ELDRTP E+ 
Sbjct: 1    MHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVS 60

Query: 1203 KKLEEIRNK 1211
            KKLE+IR +
Sbjct: 61   KKLEDIRTR 69


>gi|390603312|gb|EIN12704.1| hypothetical protein PUNSTDRAFT_97523 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1268

 Score =  107 bits (266), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 171/700 (24%), Positives = 260/700 (37%), Gaps = 107/700 (15%)

Query: 400  ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ-LPGVPSAVW 458
            ++L P+ D  + N      PQI T  G     SL+++R G      AV + LPG  S VW
Sbjct: 480  QNLAPVTDALLMNADGSGQPQIVTCSGGANAGSLKVVRKGADFKTAAVVESLPGTVS-VW 538

Query: 459  TVKKNVNDEFDAYIVVSFNNATLVLSIGE--TVEEV--SDSGFLDTTPSLAVSLI----- 509
             V+K   D  D+YIV S    T VL + E  TV  +  + + F  + P+++V+ I     
Sbjct: 539  PVRKRYYDNTDSYIVASTLRCTQVLLLEEHDTVNPLVAASTDFATSGPTISVANILRRRL 598

Query: 510  -------GDDSL-MQVHPSGIRHIRED-------GRINEWRT--PGKRTIVKVGSNRLQV 552
                    D SL +QV PS +R +  D         ++ W+   PG + IV    N  Q+
Sbjct: 599  VNGKSEYEDSSLVVQVTPSKMRLLEHDMIGPVEFRLVDTWKPSGPGPQEIVTASINPTQI 658

Query: 553  VIALSGGELIYFEVDMTGQL-LEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNT 610
             + L GG L  F +       L   +H  S D++ +    +  G   S F+AVG +  N 
Sbjct: 659  ALGLRGGRLCVFRLAPNDHFDLRFTQH-FSNDISAVSCLPLNPGNLISAFIAVGFWGSNN 717

Query: 611  IRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLF 670
            + IL    +     L    + + P SLL      S G +D   H A L +  GL +G L 
Sbjct: 718  VMILCQKGNILELELQTDPLPALPRSLLLYNFGTSFGKKDPNYH-AHLLI--GLADGSLV 774

Query: 671  RTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLS 730
                     +L D +   LG  P  L      G+ A+ C  +R  + Y  R R    P  
Sbjct: 775  SYA--YARKELKDKKVVPLGASPVSLVPCEANGKKAIFCCGTRAAVVYWDRDRLQNAPAL 832

Query: 731  YETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET--FNETALPLRY-TPRRFVLQP 787
             + +  A   +S    +  + V G+    FTI   G     +  ++PL    P+R     
Sbjct: 833  LKNVVTACPLNSTSFEQSTILVTGSG---FTIGHFGNVAGLHVRSVPLGVDVPKRITYNN 889

Query: 788  KKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQ 847
            +  L+ +                +KE                    GDDE          
Sbjct: 890  ESHLLGV-------------ACIRKEPHRI----------------GDDEGTIR------ 914

Query: 848  YGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE-HGTLLAVGTA 906
                        S  R+LD  S       +L+ +E   S   ++    E + +   +GTA
Sbjct: 915  ------------SSFRLLDDTSFGELDRFDLEADEDITSAVVLSLGTAEAYTSHFCIGTA 962

Query: 907  KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRL 966
                F     +      +  F    K L  +    V G   AL   QG + A +   + +
Sbjct: 963  ---DFTSDDQLEVSKGRLVVFDPSTKVLSPVATLDVNGCVYALASIQGLVAAAVNSAVIV 1019

Query: 967  YDL-------GKKRL--LRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQ 1017
            Y L         KRL  L    +  F   +V   T   RI+VGD   S    +       
Sbjct: 1020 YRLETDGPTFSSKRLVQLANWNHNYFVTNLV---TRGSRIFVGDAISSVSILELT--GQA 1074

Query: 1018 LYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQ 1057
            L   A D  P W  A      D++ GAD   N++  +L +
Sbjct: 1075 LQTVARDYGPLWPVAIESTGPDSVIGADGEFNLFTFKLSE 1114


>gi|68005631|ref|XP_670088.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56485013|emb|CAI03225.1| hypothetical protein PB301095.00.0 [Plasmodium berghei]
          Length = 177

 Score =  104 bits (259), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 58/155 (37%), Positives = 90/155 (58%), Gaps = 2/155 (1%)

Query: 901  LAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGI 960
            L VGT   +     RN+ +  + +Y + +    L LLH T +E  P   C F G+++  +
Sbjct: 8    LIVGTTTNMTL-KSRNVPSASLRVYTY-DINYKLNLLHITPIEDQPYCFCPFNGKVIVSV 65

Query: 961  GPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYI 1020
            G  LR+Y LGKK+LL+KCE K  P  IVSI    DRI+  DI+ES     Y  ++N + +
Sbjct: 66   GNKLRIYALGKKKLLKKCEYKDIPEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNVIRL 125

Query: 1021 FADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
             +DD +PRW+T +  +D  T+  ADKF +++ +R+
Sbjct: 126  ISDDIIPRWITCSEILDHHTIIAADKFDSVFILRV 160


>gi|449526686|ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
           sativus]
          Length = 997

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 207/486 (42%), Gaps = 85/486 (17%)

Query: 393 LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMA-VSQLP 451
           L+    ++++ PI+DM + +  +E+  Q+F  CG  P  SLRI+R G++V  +   S + 
Sbjct: 450 LIYANPIQNIAPILDMSVVDKHDEKQDQMFACCGMAPEGSLRIIRNGISVENLLRTSPIY 509

Query: 452 GVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLIG 510
              +++WT+K   +D + +Y+V+SF   T VLS+G +  +V+DS GF   T +LA  L+ 
Sbjct: 510 QGITSIWTIKMKRSDTYHSYLVLSFVEETRVLSVGLSFIDVTDSVGFQSDTCTLACGLLD 569

Query: 511 DDSLMQVHPSGIR-----HIREDGRINEWRTPGKRTI------VKVGSNRLQVVIALSGG 559
           D  ++Q+H + +R      I     I E  +P   +       + +G+    V++  +  
Sbjct: 570 DGLVIQIHQNAVRLCLPTKIAHSEGI-ELSSPACTSWFPDNIGISLGAVGHNVIVVSTSN 628

Query: 560 ELIYFEVDMTG------QLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRI 613
               F + +        ++ E +   +  +++C+ I      +K S F  + S +N+I  
Sbjct: 629 PCFLFILGVRKVSGYDYEIYEKQYLRLQYELSCISIPEKHFAKKESNF-PMNSVENSIMS 687

Query: 614 LSLDPDDCMQILSVQSVSSPPESLLF-----LEVQAS--------VGGEDGADHPASL-- 658
             L+   C  I+ + +     E L F     L V AS        +G       P  +  
Sbjct: 688 TLLNEVSCDTIIVIGTHRPSVEILSFVPSIGLTVLASGTISLMNILGNAVSGCIPQDVRL 747

Query: 659 ------FLNAGLQNGVLFR----------------TVVDMVTGQLSDSRS---------- 686
                 ++  GL+NG+L R                TVV  +    SDS S          
Sbjct: 748 VLVDRFYVLTGLRNGMLLRFEWPHTATMNSSDMPHTVVPFLL-SCSDSFSKEFHNADILE 806

Query: 687 ---------------RFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSY 731
                          R +G+ P  L  +     + ++ LS RPWL +  R     T +S+
Sbjct: 807 KHEDEIPSCLQLIAIRRIGITPVFLVPLTDRLDSDIIALSDRPWLLHSARHSLSYTSISF 866

Query: 732 ETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKL 791
           +   +     S  C  G++ VA ++L +  +    +  N     L  TPR+ +   + KL
Sbjct: 867 QPSTHVTPVCSADCPSGLLFVAESSLHLVEMVH-TKRLNVQKFHLGGTPRKVLYHSESKL 925

Query: 792 MVIIET 797
           ++++ T
Sbjct: 926 LLVMRT 931


>gi|449684814|ref|XP_004210722.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 185/410 (45%), Gaps = 58/410 (14%)

Query: 338 LKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIE 397
           L +G +F  S  G+    Q   +  +PD + S  T++             R   NL    
Sbjct: 10  LDNGVVFIGSCLGDS---QIVKLNTEPDKKGSFITIL-------------RSFTNL---- 49

Query: 398 QVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAV 457
                 PI+DM + +L  +   Q+ T  G     SLRI+R G+ ++E+A   L G+   +
Sbjct: 50  -----GPILDMCVVDLERQGQDQLVTCSGAFKDGSLRIIRNGIGINELASIDLAGI-MGL 103

Query: 458 WTVKKN-VNDEFDAYIVVSFNNATLVLSIGE-TVEEVSDSGFLDTTPSLAVSLIGDDSLM 515
           W +K N +N +    +V+SF   + VLS+    VEE+   GF     +   + +  + L+
Sbjct: 104 WCLKVNSINSDLHDTMVLSFVGQSRVLSLSTEEVEEIEIEGFSSDKQTTYCANVNFNQLI 163

Query: 516 QVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV 575
           Q H             + W  P  + I    SN  Q+V++L G ELIY EV+    + ++
Sbjct: 164 QKH----------FFFSNWLPPDNKHISVAVSNSFQIVVSL-GKELIYLEVE-DSNIKQI 211

Query: 576 EKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP- 633
               +  +VACLD++        S  L VG + D ++RIL+L P+  ++ L V+ +S   
Sbjct: 212 SHTVLEYEVACLDLSPKGSNETTSDRLCVGLWTDISVRILAL-PN--LEELYVEKLSGEM 268

Query: 634 -PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLR 692
            P S+L +        ED        +L   L +G LF  +++ +TG LSD +   LG +
Sbjct: 269 IPRSILMITF------EDKE------YLLCALGDGSLFYFLLNRLTGVLSDQKKVSLGTK 316

Query: 693 PPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSS 742
           P  + S   G    +   S RP + Y    + + + ++ + + Y +  ++
Sbjct: 317 PTVIQSFKSGSSTHVFACSDRPTVIYSSNNKLVFSNVNLKEVCYMSPLNT 366



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 154/329 (46%), Gaps = 50/329 (15%)

Query: 877  ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRN-IVAGYIHIYRFVEEGKSLE 935
            +  +NE A S+ + +F + +  T   VGT+     +P+ +    G I +++  E GK ++
Sbjct: 393  QFLENEWATSLTSCSFSN-DPNTYYCVGTS---MVYPEESEPKEGKIILFQLFE-GKLVQ 447

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL-GKKRLLRKCENKLFPNTIVSI--NT 992
            +  KT V G    L  F G+LLAG+  ++ +Y+    K L ++C    + NTI+++   +
Sbjct: 448  IGSKT-VNGAVYVLQGFNGKLLAGVNSLVSVYEWTSDKELKQEC---CYHNTILALYLKS 503

Query: 993  YRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
              D I VGD+  S     Y+    +L   A D  P W+TA   ID DT  GA+   N++ 
Sbjct: 504  KGDFILVGDLMRSMTLLAYK-PLGRLEEIAHDFSPNWMTAVEIIDDDTFLGAENSFNLFI 562

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG-- 1110
             +  +D S   +E+                 + ++ I ++H+GD V   +  SLV     
Sbjct: 563  CQ--KDNSSVNDEE----------------RHHLQTIGKYHLGDFVNVFKHGSLVMHHST 604

Query: 1111 ------GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY 1164
                    S++YGTV G++G ++A   ++  DF S ++  + +    +   +H  +RS Y
Sbjct: 605  EQLTPISSSILYGTVRGAIG-LVAGLPKNTFDFLSQVQEKLSKTIKSVGKIEHEFWRSFY 663

Query: 1165 FPVKD-----VIDGDLCEQFPTLSLDLQR 1188
               K       +DGDL E      LDL R
Sbjct: 664  NDKKTDLAVGCVDGDLIES----CLDLTR 688


>gi|169611218|ref|XP_001799027.1| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
 gi|160702249|gb|EAT83885.2| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
          Length = 1140

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 212/953 (22%), Positives = 367/953 (38%), Gaps = 163/953 (17%)

Query: 297  FLLQTEYGDIFKVTLEHD-NEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            F+L  +YG ++   L  D  + V   K+         + +  L +GY+F  S  G+  + 
Sbjct: 307  FVLADDYGRLYLFMLILDEKKKVQSWKLDIIGQTSRASVLVYLDAGYVFVGSHQGDSQVI 366

Query: 356  QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMR------ 409
            +         +   S  +++T     PV                     IMDM       
Sbjct: 367  R---------ITEQSMEIVQTFANIAPVLD-----------------FTIMDMGNRSGEG 400

Query: 410  IANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD 469
              N +     +I T  G     SLR +R G+ + ++ V       S ++ +K N + E+ 
Sbjct: 401  QTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEMEHISDLFGLKSNASAEYA 460

Query: 470  AYIVVSFNNATLVLSI---GETVEEVSD--SGFLDTTPSLAVSLIGDDSLMQVHPSGIRH 524
              ++V+F N T +      GE VEEV +  S  LD T +LA + I    ++QV    +R 
Sbjct: 461  DTLLVTFVNETRIFRFDPQGE-VEEVDEFASVALDET-TLAAANISQGRVVQVTGGRVRV 518

Query: 525  IREDGRI--NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
               DG +  +EW  P   TI     N   V+++L G  +I   +D    L E +K  +  
Sbjct: 519  SDLDGGMITSEWVPPSGETITAASVNDSHVLLSLGGVSVITLNMDGLKVLTE-KKFGVES 577

Query: 583  DVACLDIASVPEGRKRSRFLAVGSYDNT-IRILSLDPDDCMQILSVQSVSSPPESLLFLE 641
             VAC+ + S       S    +G + N+ + I SLD  + ++ + V S  S P SLL  +
Sbjct: 578  QVACIALPSTS-----SSMCFIGFWKNSQLAICSLDTLEAVKTVQV-SEDSVPRSLLLTQ 631

Query: 642  VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV 701
            +          D P +LF  A + +G +     D   G+LS  +S  LG R     ++  
Sbjct: 632  I--------FPDQPPTLF--AAMADGNVVTYSFDTSNGELSGRKSIVLGTREATFRALPR 681

Query: 702  G-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVF 760
            G G   +      P L Y   GR + + ++ E       F S+     V     + LR+ 
Sbjct: 682  GNGLFNVFATCEHPSLIYASEGRLVYSAVTAENATTVCPFDSEAYPGSVAIATSDDLRIA 741

Query: 761  TIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGM 820
             ++    T  +T L +  T RR    P                               G+
Sbjct: 742  LVDTERTTHVQT-LKVDETVRRIAYSP-------------------------------GL 769

Query: 821  GENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQD 880
               G G + ++                    KA  +  +S  +++D           L +
Sbjct: 770  KAFGLGTVKRI-------------------LKAGEEIMLSHFKLVDEIQFKELDTYALNE 810

Query: 881  NEAAFSICTVNFHDKEHGTL--LAVGTAKGLQFWPKRN--IVAGYIHIYRFVEEGKSLEL 936
             E    +   +  D   GT     +GTA    +   +N  +  G I I     E + L+L
Sbjct: 811  EELVECVMRCDLADGSGGTAERFVIGTA----YLDDQNSTVERGRILILEVTPE-RVLKL 865

Query: 937  LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL----GKKRLLRKCENKLFPNTIVSINT 992
            + +  V+G    L   +G+++A +   + +YD+      K  L K          + I  
Sbjct: 866  VTEIAVKGGCRCLAMCEGKIVAALIKTIVVYDIEYRTQSKPDLVKAATFRCSTAPIDITV 925

Query: 993  YRDRIYVGDIQESFHFCKYRRDE----NQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
               +I + D+ +S    +Y+R E    ++L   A      W TA   +D +T   +D  G
Sbjct: 926  NGTQIAIADLMKSMVVVEYQRGETGLPDKLVEVARHFQVTWATAVAEVDENTYLESDAEG 985

Query: 1049 NIYFV-RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKM--EEIVQFHVGDVVTSLQKAS 1105
            N+  + R P+ V+D+            ++ +LN +   +  E + +    DV T+   A 
Sbjct: 986  NLLVLYRDPKGVTDD------------DKRRLNVSSEMLLGEMVNRIRRIDVATA-PDAV 1032

Query: 1106 LVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF 1165
            +VP        GTV GS+  + A  S++ +D    L+ ++          D   +R+   
Sbjct: 1033 VVP----RAFMGTVEGSI-YLFALISQNYLDLLITLQSNLGNLVVSPGNMDFAKFRAFKN 1087

Query: 1166 PVKD------VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKI 1212
             V+        +DG+L E+F     D+QRK  + L         +LE+IR+ +
Sbjct: 1088 QVRTEEEPNRFVDGELIERFLDCEEDVQRKAIEGLG-------VELEDIRSLV 1133


>gi|170589357|ref|XP_001899440.1| CPSF A subunit region family protein [Brugia malayi]
 gi|158593653|gb|EDP32248.1| CPSF A subunit region family protein [Brugia malayi]
          Length = 655

 Score =  100 bits (249), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 148/666 (22%), Positives = 274/666 (41%), Gaps = 73/666 (10%)

Query: 551  QVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNT 610
            Q+V+A  G  LIY E +  G    + + E   +++C+DI  + +G  RS   AVG + + 
Sbjct: 6    QLVVA-CGALLIYLEANSAG-FKVITEIECEFEISCIDITPIGKGTLRSEICAVGYWTDL 63

Query: 611  IRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLF 670
               L   P         Q V    E ++   +  S+       H   ++L   L +G + 
Sbjct: 64   SVALRALP---------QLVEVVREKIVGDMLSRSIMLSPMEGH---VYLLVALGDGTVH 111

Query: 671  RTVVDMVTGQLSDSRSRFLGLRPPKL--FSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTP 728
               +DM TG L D +   LG +P  L  F         +   S RP + Y    + L + 
Sbjct: 112  YFQIDMKTGALLDPKKATLGTQPIHLRKFRSRCSPVHNIFVCSDRPAVIYSSNQKLLFSN 171

Query: 729  LSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPK 788
            ++   +       ++   + +V   G++L +  I+ + +    T +PL  +P R   QP 
Sbjct: 172  VNLRMVSTMTPLYAEAYPDALVLTDGHSLVIGRIDDIQKLHIRT-VPLGESPSRIAYQP- 229

Query: 789  KKLMVIIETDQGALTAEEREAAKKECFEA--AGMGENGNGNMDQMENGDDENKYDPLSDE 846
                   ET+  A+  E  E      F      MG++  G     +N  + +     S  
Sbjct: 230  -------ETNTIAVIVERLEVILFLFFYVFVDAMGKHHFGQCAS-KNAMETSSSRLSSMR 281

Query: 847  QYGYPKAESDKW-VSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGT 905
            +   P+  +++  VS + +LD  +       EL+ +E A S+ +    D        VGT
Sbjct: 282  REPTPECLAEEMEVSSVLLLDSNTFEILHSHELEGSEMAMSLASCQLGDDSQ-PYFVVGT 340

Query: 906  AKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLR 965
            A  +    +  +  G I +++  E  + + L+++ +++G   ++    G+L+  +   +R
Sbjct: 341  AVIMSDETESKM--GRIMMFQASEGPERMRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVR 398

Query: 966  LYDLGKKRLLR-KCENKLFPN-TIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFAD 1023
            L++    + LR +C +  F N T + + T  D I VGD+  S     Y+  E+     A 
Sbjct: 399  LFEWTADKELRLECSD--FDNVTALYLKTKNDLILVGDLMRSLSLLSYKSMESTFEKVAR 456

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAP 1083
            D +  W++A   ID D   GA+   N++ V   +D     +E+ T               
Sbjct: 457  DFMTNWMSACEIIDSDNFLGAENSYNLFTVM--KDSFTVFKEEGT--------------- 499

Query: 1084 NKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
             +++E+  F++G++V      SL        P    S++YGT  G +G ++         
Sbjct: 500  -RLQELGLFYLGEMVNVFCHGSLTATQVDVAPLYHSSILYGTSDGGIGVIVQMPPV---- 554

Query: 1137 FFSHLEMHMRQ--EHPPLCGR-DHMAYRSAYFPVKD-----VIDGDLCEQFPTLSLDLQR 1188
             ++ L+   ++  E+   C R  H  YR+     +       IDGDL E    +  D   
Sbjct: 555  LYTFLQDVQKRLAEYAENCMRISHTQYRTFETEKRSEAPNGFIDGDLIESLLDMGKDSVE 614

Query: 1189 KIADEL 1194
            ++ + L
Sbjct: 615  QVVNGL 620


>gi|90108802|pdb|2B5N|A Chain A, Crystal Structure Of The Ddb1 Bpb Domain
 gi|90108803|pdb|2B5N|B Chain B, Crystal Structure Of The Ddb1 Bpb Domain
 gi|90108804|pdb|2B5N|C Chain C, Crystal Structure Of The Ddb1 Bpb Domain
 gi|90108805|pdb|2B5N|D Chain D, Crystal Structure Of The Ddb1 Bpb Domain
          Length = 323

 Score =  100 bits (249), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 157/336 (46%), Gaps = 24/336 (7%)

Query: 436 LRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVSD 494
           +R G+ + E A   LPG+   +W ++ + N E    +V+SF   T VL + GE VEE   
Sbjct: 4   MRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEETEL 62

Query: 495 SGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQV 552
            GF+D   +     +    L+Q+  + +R + ++ +  ++EW+ P  + I     N  QV
Sbjct: 63  MGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQV 122

Query: 553 VIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTI 611
           V+A+  G  +Y+      +L ++   EM  +VACLDI  + +    S   A+G + D + 
Sbjct: 123 VVAV--GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISA 180

Query: 612 RILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVL 669
           RIL L   + +  ++L  + +   P S+L    ++S        H    +L   L +G L
Sbjct: 181 RILKLPSFELLHKEMLGGEII---PRSILMTTFESS--------H----YLLCALGDGAL 225

Query: 670 FRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPL 729
           F   +++ TG LSD +   LG +P  L +        +   S RP + Y    + + + +
Sbjct: 226 FYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNV 285

Query: 730 SYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
           + + + Y    +SD   + +     + L + TI+ +
Sbjct: 286 NLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEI 321


>gi|358338734|dbj|GAA31211.2| DNA damage-binding protein 1, partial [Clonorchis sinensis]
          Length = 1515

 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 194/896 (21%), Positives = 341/896 (38%), Gaps = 161/896 (17%)

Query: 246  GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGD 305
            GV++  +N + Y  +  P +   IP+     A+   ++  AA   Q+    +LL    G 
Sbjct: 219  GVILVGDNIIYYHTKDGPHISQYIPQ-----AKASQVLCYAAVDAQR----YLLGDMAGR 269

Query: 306  IFKVTLEHDNE-------------------HVSELKIKYFDTIPVTASMCVLKSGYLFAA 346
            ++ V L  ++                     +  ++I+         S+  + +G +F  
Sbjct: 270  LYMVHLLAEDHTPSGNGLLGSTSSAAVPSARIGSIRIELLGETATPESIAYVDNGVVFIG 329

Query: 347  SEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIM 406
               G+  L +   +  DPD E +S                      +  +E   ++ PI+
Sbjct: 330  CTLGDSQLIR---LNPDPDPERNSY---------------------ITVLENYTNIGPIV 365

Query: 407  DMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
            DM +  L  +   Q+ T  G     +LRI+R G+ + E A      +  A W      +D
Sbjct: 366  DMVL--LESKGQNQLITCSGAYKEGTLRIIRNGIGIHEHATIDQDLIKGA-WCFPLE-SD 421

Query: 467  EFDAYIVVSFNNATLVLSI-GETVEEVSDSGF--------------LDT-------TPSL 504
             +D  IVVS    T +L +  + +  +   GF              +D        + S 
Sbjct: 422  RYDDSIVVSMVGQTQLLRLTDDDITALHLEGFKTDEQTVYCATLSPMDACTSDNPESSSR 481

Query: 505  AVSLIGDDSLMQVHPSGIR-----HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGG 559
            + S+     LMQ   SGIR     H+   G + EWR+P  R I  + S+   +V+A SG 
Sbjct: 482  SYSVFQHSLLMQATTSGIRLIGIHHLNGSGCLAEWRSPSGRGISCLSSHGALIVVA-SGP 540

Query: 560  ELIYFEVDMTGQLLEVEK---HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSL 616
            EL    V         E+     MS +VAC+D+   P   KR+ + A  S  +TI     
Sbjct: 541  ELYVLRVVGPANQPSFEQTAHRTMSNEVACIDL--TPFDHKRAAYAA--SQTSTID---- 592

Query: 617  DPDDCM--QILSVQSVSSPPESLLFL------------EVQASVGGEDGADHPASL---- 658
            +P D    Q+++V        +LL L            E  AS G    A  P S+    
Sbjct: 593  EPVDYTVPQLVAVGLWLGYGLALLRLPNLELVHEEPLPETTASTG---TALLPRSVLLAQ 649

Query: 659  -----FLNAGLQNGVL-FRTVVDMVTGQLSDSRSRFLGLRPPKLF--SVVVGGRAAMLCL 710
                 +L A + +G L F TV     G +     R      P +F        +  +   
Sbjct: 650  LEDMAYLFAAMGDGTLYFYTVCPSADGIVLRDAKRVNAGTGPSMFLKQWRSQCKVNVFVC 709

Query: 711  SSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFN 770
            S+ P + Y  + + +   L+ + + + A  +     + +  V   AL + +++ + +  +
Sbjct: 710  SNHPCVIYSIKNKLIFANLNMKEVNFMAPLNGAFYRDCIALVTPTALVIGSVDEI-QKLH 768

Query: 771  ETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQ 830
               +PL  TP+R  LQ +   +       G +T  +    +   F+      + +  + +
Sbjct: 769  VRTVPLEETPKRLALQDETGSL-------GVITYRQEVFQEGSGFKPVRSSISLSQKVPK 821

Query: 831  MENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN---------TTCLLELQDN 881
              +   +     +S  +  + + E    VS + + +  +           +  L+E+   
Sbjct: 822  STSRLPKTAPSSVSATERKFREVE----VSSLLIFNKSTMELMFAHSFYFSQTLVEV--- 874

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNI--VAGYIHIYRFVEEGKSLELLHK 939
              A SI ++   D     L AVGTA    F  +  +    G IH++ +  E   LE +  
Sbjct: 875  --AVSIASIEPTDGSKSMLYAVGTA----FLVEEEVEPSKGRIHLFHWDPETARLETVLV 928

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR--DRI 997
              V G    L  F GRLLA I   +RL+D+ +  L   C    F   I+++   R  D +
Sbjct: 929  HDVNGAVYRLLDFNGRLLAAINSSVRLFDIKEDSLRLACS---FNENIIALFLRRKGDFV 985

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFV 1053
             VGD+  S     YR + N          PRW T    +D +    A+   +++ V
Sbjct: 986  LVGDLMRSLTLLLYRPNVNNFEAIGRHRNPRWTTCIEILDDEHFLAAEVENSLFVV 1041


>gi|74208347|dbj|BAE26370.1| unnamed protein product [Mus musculus]
          Length = 599

 Score =  100 bits (248), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 121/571 (21%), Positives = 235/571 (41%), Gaps = 68/571 (11%)

Query: 656  ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPW 715
            +S +L   L +G LF   +++ TG LSD +   LG +P  L +        +   S RP 
Sbjct: 57   SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPT 116

Query: 716  LGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALP 775
            + Y    + + + ++ + + Y    +SD   + +     + L + TI+ + +    T +P
Sbjct: 117  VIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRT-VP 175

Query: 776  LRYTPRRFVLQPKKKLMVIIET-----DQGALTAEEREAAKKECFEAAGMGENGNGNM-- 828
            L  +PR+   Q   +   ++ +     D    T   R +A  +   ++        +   
Sbjct: 176  LYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTA 235

Query: 829  -DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSI 887
              +   G++   ++ L  +Q+ +    + +++                     NE A S+
Sbjct: 236  PHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL--------------------QNEYALSL 275

Query: 888  CTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPL 947
             +     K+  T   VGTA  + +  +     G I ++++  +GK L+ + + +V+G   
Sbjct: 276  VSCKL-GKDPNTYFIVGTA--MVYPEEAEPKQGRIAVFQY-SDGK-LQTVAEKEVKGAVY 330

Query: 948  ALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFH 1007
            ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  D I VGD+  S  
Sbjct: 331  SMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVL 390

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDP 1067
               Y+  E      A D  P W++A   +D D   GA+   N++  +  +D +   +E+ 
Sbjct: 391  LLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--KDSAATTDEE- 447

Query: 1068 TGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---------PGGGESVIYGT 1118
                              ++E+  FH+G+ V      SLV         P  G SV++GT
Sbjct: 448  ---------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPTQG-SVLFGT 491

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF-----PVKDVIDG 1173
            V G +G + +  S    +    ++  + +    +   +H  +RS +      P    IDG
Sbjct: 492  VNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDG 550

Query: 1174 DLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
            DL E F  +S    +++   L    G  +K+
Sbjct: 551  DLIESFLDISRPKMQEVVANLQYDDGSGMKR 581


>gi|449017314|dbj|BAM80716.1| similar to splicing factor 3b subunit 3 [Cyanidioschyzon merolae
            strain 10D]
          Length = 1678

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 106/251 (42%), Gaps = 42/251 (16%)

Query: 980  NKLFPNTIVSINTYRD--RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHID 1037
             +   + IV++  +    RI+V  +       KY   EN+L + A+D   RW+     +D
Sbjct: 1382 KRALASPIVALTAHEALCRIFVASLHHGISLFKYYVQENRLVLVAEDMQRRWIHRLQLLD 1441

Query: 1038 FDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV------- 1090
             DT+  ADKFG+I  +RLP + S  IE DP+ G++    G    +P      V       
Sbjct: 1442 ADTVVAADKFGSIAVLRLPVESSAAIEGDPSYGRLAERYG---ASPESARSFVARLMPEC 1498

Query: 1091 QFHVGDVVTSLQ----KASLVPGG-----------GESVIYGTVMGSLGAMLAFSSRDDV 1135
              HVG VVTSL      A+  P              E+++YGTV G  G ++ F +R + 
Sbjct: 1499 SVHVGSVVTSLHVFGYGAATDPDATPASAPRSWTEAEAILYGTVSGGFGMLIPFRTRAEW 1558

Query: 1136 DFFSHLEMHMRQEHPPLCGRDH---------------MAYRSAYFPVKDVIDGDLCEQFP 1180
            D    LE  +       C   H               + ++    P + V++G LC  F 
Sbjct: 1559 DIVQRLERELHLFWAKCCAPGHTMDATHTRNLLHASVLRFQGRIEPTRHVVNGHLCGLFA 1618

Query: 1181 TLSLDLQRKIA 1191
             L  + QR IA
Sbjct: 1619 LLDPETQRSIA 1629


>gi|340055047|emb|CCC49355.1| conserved hypothetical protein, fragment [Trypanosoma vivax Y486]
          Length = 1684

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 122/318 (38%), Gaps = 91/318 (28%)

Query: 151 LTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDST-------------- 196
           ++  SP+EAH+  TI+YSIC ++   +N  FA +E +  EA Q S               
Sbjct: 293 ISFGSPVEAHR-QTIIYSICALEGVTENATFATLEQELPEAKQSSAQNGENTSGVSAAVG 351

Query: 197 ----------------------GQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANML 234
                                 G       K L  Y    GL  V R     V   A+ L
Sbjct: 352 GRAFLRVNREGMQHRGAAGSGDGTGCRNRSKQLVVYAFAAGLQQVQRTHLVHVPATAHRL 411

Query: 235 VTVPGGGDGPSGVLVCAENFVIYKN-----------------------QGHPDV---RAV 268
           + VP    GP GVLVC ++ +I+ +                        G P +    A 
Sbjct: 412 IAVPADPFGPGGVLVCTDSEIIWYDLLLHLHSNSRDTRGIDVMHMPNPMGSPSLFKSSAP 471

Query: 269 IPRRADLPAE-RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLE-----------HDNE 316
            PRR D   +    +I+S A+   +  FF LLQ E GDIF+V+L              N+
Sbjct: 472 FPRRDDFREQLYDPMIISHASTSVRNDFFMLLQDEQGDIFRVSLTIADVQRSYNALRSNQ 531

Query: 317 H---------------VSELKIKYFDTIPVTASMCVLKSGYLFAASEFG-NHALYQFQAI 360
                            S L I YFDTIP T +M + + G++FAASE    H LY+    
Sbjct: 532 QRQVGILDTAPPSAVIPSPLTITYFDTIPPTTTMVLFRRGFVFAASESAPAHGLYKIIKD 591

Query: 361 GADPDVEASSSTLMETEE 378
           G   D E   S +   E+
Sbjct: 592 GYKNDAEYVLSRMRMVEQ 609


>gi|238595542|ref|XP_002393797.1| hypothetical protein MPER_06414 [Moniliophthora perniciosa FA553]
 gi|215461817|gb|EEB94727.1| hypothetical protein MPER_06414 [Moniliophthora perniciosa FA553]
          Length = 79

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 45/79 (56%), Positives = 62/79 (78%), Gaps = 1/79 (1%)

Query: 1  MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE-NSGRIETLVSTEIFG 59
          M+LY+LTLQ PT I  AI GNFSG +  EI+V+ G  LELLRP+ ++G++ T+++T++FG
Sbjct: 1  MHLYNLTLQPPTAISQAIVGNFSGARQQEIIVSHGTRLELLRPDPSTGKVATIIATDVFG 60

Query: 60 AIRSLAQFRLTGSQKDYIV 78
          +IRSLA FRLTG  KDY +
Sbjct: 61 SIRSLAAFRLTGGTKDYAI 79


>gi|226510488|ref|NP_001145925.1| uncharacterized protein LOC100279448 [Zea mays]
 gi|219884971|gb|ACL52860.1| unknown [Zea mays]
          Length = 416

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 172/383 (44%), Gaps = 52/383 (13%)

Query: 848  YGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAK 907
            + Y ++  +     IR+LD ++  + C+  L   E   SI + +F D +      VGTA 
Sbjct: 60   FKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCSFAD-DSNVYYCVGTAY 118

Query: 908  GLQFWPKRNI-VAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRL 966
             +   P+ N    G I ++  VE+G SL+L+ + + +G   +L  F G+LLA I   ++L
Sbjct: 119  VI---PEENEPTKGRILVFA-VEDG-SLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQL 173

Query: 967  YDL-----GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIF 1021
            Y       G   L  +C +      + +  T  D I VGD+ +S     Y+ +E+ +   
Sbjct: 174  YKWMSREDGSHELQSECGHHGHILALYT-QTRGDFIVVGDLMKSISLLVYKHEESAIEER 232

Query: 1022 ADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNG 1081
            A D    W+TA   +D +   GA+   N++ VR   D + + E                 
Sbjct: 233  ARDYNANWMTAVEMLDDEVYVGAENSYNLFTVRKNSDAATDDER---------------- 276

Query: 1082 APNKMEEIVQFHVGDVVTSLQKASLVP-------GGGESVIYGTVMGSLGAMLAFSSRDD 1134
               ++E + ++H+G+ V   +  SLV        G   +VI+GT+ G +G ++A    D 
Sbjct: 277  --ARLEVVGEYHLGEFVNRFRHGSLVMRLPDSDIGQIPTVIFGTINGVIG-IIASLPHDQ 333

Query: 1135 VDFFSHLEMHMRQEHPPLCGRDHMAYRSAY-----FPVKDVIDGDLCEQFPTLSLDLQRK 1189
              F   L+  + +    +    H  +RS +        ++ +DGDL E F    LDL R 
Sbjct: 334  YIFLEKLQSTLVKYIKGVGNLSHEQWRSFHNDKKTAEARNFLDGDLIESF----LDLSRS 389

Query: 1190 IADELDRTPG----EILKKLEEI 1208
              +E+ +  G    E+ K++EE+
Sbjct: 390  KMEEVSKAMGVPVEELSKRVEEL 412


>gi|147860990|emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
          Length = 1298

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 149/320 (46%), Gaps = 44/320 (13%)

Query: 393 LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ--L 450
           LV    ++++ PI+DM + +  +EE  Q+F  CG  P  SLRI+R G++V ++  +    
Sbjct: 495 LVYRSPIQNIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIY 554

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
            G+ +  WTVK  V D + +++V+SF   T VLS+G +  +V+DS GF     +LA  ++
Sbjct: 555 QGI-TGTWTVKMKVIDSYHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGVV 613

Query: 510 GDDSLMQVHPSGIRHIREDGRINEWRTPGKRTI----------VKVGSNRLQVVIALSGG 559
            D  L+Q+H +G++        +    P    I          + +G+    +++  +  
Sbjct: 614 DDGLLVQIHKNGVKLCLPTTVAHPEGIPLASPICTSWFPENISISLGAVGYNLIVVATSS 673

Query: 560 ELIYFEVDMTG------QLLEVEKHEMSGDVACLDIASVPEGRKRSRFLA---------- 603
               F + +        ++ E++   +  +V+C+ I      +K S FL+          
Sbjct: 674 PCFLFILGVRSVSAYQYEIYEMQHVRLQNEVSCISIPHKHFDKKPSTFLSNLVDNSSAAA 733

Query: 604 ------------VGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
                       +G++  ++ ILS  PD+ ++IL+  ++S    + L   V   V  +  
Sbjct: 734 LLIGVNIGRIFVIGTHKPSVEILSFLPDEGLRILASGAIS--LTNTLGTAVSGCVPQDAR 791

Query: 652 ADHPASLFLNAGLQNGVLFR 671
                  ++ +GL+NG+L R
Sbjct: 792 LVLVDRFYVLSGLRNGMLLR 811



 Score = 44.3 bits (103), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%)

Query: 687 RFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCV 746
           R +G+ P  L  +     A ++ LS RPWL    R     T +S++   +     S +C 
Sbjct: 880 RRIGITPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECP 939

Query: 747 EGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETD 798
            G++ VA N+L +  +    +  N     L  TPR+ +   + +L++++ T+
Sbjct: 940 MGILFVAENSLHLVEMVH-SKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTE 990



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 9/119 (7%)

Query: 38  LELLRPENSGRIETLVSTEIFGAIRSLAQFR---------LTGSQKDYIVVGSDSGRIVI 88
           LEL+     G ++++    +FG I+ LA  R         L    +D +VV SDSG++  
Sbjct: 99  LELVIIGEDGIVQSVCEQAVFGTIKDLAVLRWNERFHHQNLQMQGRDLLVVVSDSGKLSF 158

Query: 89  LEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDT 147
           L +    + F  +        G  R   GQ LA+D  G  +   A E +  ++ ++  T
Sbjct: 159 LRFCNEMHRFFPVTHVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFSISMAT 217


>gi|407424286|gb|EKF39016.1| hypothetical protein MOQ_000764 [Trypanosoma cruzi marinkellei]
          Length = 1807

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 154/417 (36%), Gaps = 145/417 (34%)

Query: 95  KNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVL----------- 143
           +  F ++ +   G+SG R  VPG  LAVDP GRAV + A  + K++  L           
Sbjct: 190 RGKFVRVSEVALGRSGARLTVPGARLAVDPLGRAVFVSALMRLKVLVPLRKHEEYYAQRG 249

Query: 144 -----------------------------------NRDTAAR--LTISSPLEAHKSHTIV 166
                                               R  A R  ++  SP+EAH+  TI+
Sbjct: 250 RRGSGGSLQEGAEEELLMLPPRGAETGPEGAVVSTKRRPAIRDLMSFGSPVEAHR-QTII 308

Query: 167 YSICGIDCGFDNPIFAAIELDYSEADQ-----DSTGQAASEAQ----------------- 204
           + +C +D   +N  FA +E +  EA+      D +G AA+ +                  
Sbjct: 309 FFMCALDGATENATFATLEQEIHEAETLPSSADGSGNAAATSNVGAGQAFLRVNPSTRQT 368

Query: 205 ------------KNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAE 252
                       K L  Y    GL  V R     V   A+ L+ VP    GP GV+VC +
Sbjct: 369 SHGKSGSSSSRSKQLVVYAFLAGLQQVQRTHLVSVPVTAHRLIAVPAAPFGPGGVIVCTD 428

Query: 253 NFVIYKN---QGH-------------PDVRAVI-----------------PRRADLPAE- 278
             +I+ +   Q H             P ++  +                 PRR D   + 
Sbjct: 429 AELIWYDLLPQLHGSGILGNSMSSSAPSLQTPLLPSGLSSVSLFKTAVPFPRRNDFREQL 488

Query: 279 RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTL-------EHDNEHVSE----------- 320
              +I+S A    +  FF LLQ + GD+F+++L        +D   + +           
Sbjct: 489 YDPMIISHAMTCVRNDFFMLLQDDQGDVFRISLTIMDVQRSYDAMRMLQQQRRIGPPTGS 548

Query: 321 ---------LKIKYFDTIPVTASMCVLKSGYLFAASEFG-NHALYQFQAIGADPDVE 367
                    L + YFDTIP T  M + + G++FAASE    H LY+    G   D E
Sbjct: 549 VPPVSVPSPLTVTYFDTIPATTVMVLFRRGFVFAASESSPTHGLYKIVKDGYRSDEE 605



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 132/583 (22%), Positives = 212/583 (36%), Gaps = 170/583 (29%)

Query: 747  EGVVSVAGNALRVFTIERLGETFN-ETAL-------PLRYTPRRFVLQPKK-KLMVIIET 797
            E V+ VAGN L +F  ++ G T   ET+L       PL    RR +  P + + +++I T
Sbjct: 1176 ELVLGVAGNTLSLFAAQQSGGTSTAETSLEYSFGHTPLSVAGRRLLQHPTRAEYLIVIGT 1235

Query: 798  DQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAES-- 855
            +           A      AA   +  N + + M N  D+ K D  +++      A S  
Sbjct: 1236 EHRGYGVAALRRASAAAVAAAAEQQRRNQS-NNMSNAADDAKNDTNNNKNSNMNPASSGV 1294

Query: 856  --------------DKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF--------- 892
                          D +VS +++ + R+      L  Q+ EA  S    +F         
Sbjct: 1295 GIALDKPQRSLNHPDHYVSTLQLYNKRTDRLDPPLYFQEREAVLSAAVGSFVKDFGKEPV 1354

Query: 893  ------HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKS------------- 933
                      HG+   VG +     W +     G +  +RFV    +             
Sbjct: 1355 VVAGCAEQYTHGSGCGVGPS-----WTQ-----GRLRAFRFVVSQSAAAAAAGAGGGGGG 1404

Query: 934  --------LELLHKTQV-------EGIP-------------------LALCQFQGRLLAG 959
                    LE LH T +       EG+                    L +C   G L  G
Sbjct: 1405 SGTAPTLRLEQLHDTLIAAAETGTEGVAGGTIAASYRAAALLDYPSALHICPEVGLLFVG 1464

Query: 960  IGPV--LRLYDLGKKRLLRKCENKLFPNTIVSINTY------------------------ 993
            +GP   L++Y  G++R LRK      P+ I +I T                         
Sbjct: 1465 LGPENGLQVYAWGQRRFLRKRRLPKVPSRITAIETVFVSPPGAASATTTTYAPDLFRCGP 1524

Query: 994  ---------RDRIYVGDIQESFHFCKYRRDENQ------LYIFADDSVPRWLTAAHHIDF 1038
                     R  I  G + +S      +           L + A D+VPR +T+   +D 
Sbjct: 1525 NSGNIAREKRLLIVCGTLDQSVFIATVQPGSGAGGSMSFLMLVARDAVPRSVTSVVCLDE 1584

Query: 1039 DTMAGADKFGNIYFVRLPQDV----SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHV 1094
             T+A AD+FG++ F+RLPQ+     ++ +        ++ E  +       +EEI   H 
Sbjct: 1585 RTIAVADRFGSVAFLRLPQNARLGFAESLHHMSDAELVEAE--RYAAHEQVLEEIAVHHT 1642

Query: 1095 GDVVTSLQKASLVPGGGES-------VIYGTVMGSLGAMLAFSSRDDVDFFSHLE----M 1143
            G +VT+L+     P GG         + Y T +G++GA   F   +D  F +HL+     
Sbjct: 1643 GQLVTALRVHDYDPSGGADPSLALRILFYATSLGTVGAYTPFVREEDAVFAAHLQPLVAA 1702

Query: 1144 HMRQEHPPLCGRDHMAYRSA------------YFPVKDVIDGD 1174
            H+R   P   G  H+ Y +A              PV +V++GD
Sbjct: 1703 HIRC--PLQEGSGHLPYNAAGRMTATVAAAVSPTPVHNVVEGD 1743


>gi|443922905|gb|ELU42255.1| cytochrome P450 domain-containing protein [Rhizoctonia solani AG-1
           IA]
          Length = 516

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 1/112 (0%)

Query: 876 LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
           +EL +NE+AFS+    F  +E+  LL VGT +  +  P R    GY+  Y+ ++ GK LE
Sbjct: 31  IELDNNESAFSVTVAPFMARENELLLVVGTVRDTRIVP-RQYATGYLRTYKSLDAGKGLE 89

Query: 936 LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTI 987
           L H+T+V+ + LAL   +GRL AG+G  L + ++ KK+LLRKCEN     TI
Sbjct: 90  LFHQTEVDDVLLALLGTKGRLCAGVGKALSIDEMSKKKLLRKCENNASHYTI 141


>gi|6671952|gb|AAF23212.1|AC016795_25 hypothetical protein [Arabidopsis thaliana]
 gi|10998135|dbj|BAB03106.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1331

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 112/488 (22%), Positives = 200/488 (40%), Gaps = 111/488 (22%)

Query: 389 GLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVS 448
           G + L  +  ++++ PI+D  + +   E+  QIF  CG  P  SLRI+R G+ V ++   
Sbjct: 428 GTEKLHWMSSIQNIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKL--- 484

Query: 449 QLPGVP-----SAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTP 502
            L   P     +  WTVK  + D + +++V+SF   T VLS+G + ++V+DS GF     
Sbjct: 485 -LKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVC 543

Query: 503 SLAVSLIGDDSLMQVHPSGIR------HIREDG------RINEWRTPGKRTIV--KVGSN 548
           + A  L+ D  L+Q+H   IR          DG        + W  P   +I    VG N
Sbjct: 544 TFACGLVADGLLVQIHQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPENVSISLGAVGQN 602

Query: 549 RLQVVIALSGGELIYFEV-------DMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSR- 600
               +I +S     +  +           ++ E+++  +  +V+C+ +     G+KRSR 
Sbjct: 603 ----LIVVSTSNPCFLSILGVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSRD 658

Query: 601 --------------------FLAVGSYDNTIRILSLDPDDC-MQILSVQSVSSPPESLLF 639
                               FL +G++  ++ +LS   D   +++L+   VS    + + 
Sbjct: 659 SSPDNFCKAAIPSAMEQGYTFL-IGTHKPSVEVLSFTEDGVGVRVLASGLVSL--TNTMG 715

Query: 640 LEVQASVGGEDGADHPASLFLNAGLQNGVLFR----------------------TVVDMV 677
             +   +  +        L++ +GL+NG+L R                        +D V
Sbjct: 716 TVISGCIPQDVRLVLVDQLYVLSGLRNGMLLRFEWAPFSNSSGLNCPDYFSHCKEEMDTV 775

Query: 678 TGQLSD-------SRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLS 730
            G+  +         +R +G+ P  L        + ++ LS RPWL    R     T +S
Sbjct: 776 VGKKDNLPVNLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWLLQTARQSLSYTSIS 835

Query: 731 YETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
           ++   +A        VE V S   NA +                 L  TPR+ +   + K
Sbjct: 836 FQPSTHATP------VEMVHSKRRNAQK---------------FQLGGTPRKVIYHSESK 874

Query: 791 LMVIIETD 798
           L++++ TD
Sbjct: 875 LLIVMRTD 882



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 45/296 (15%)

Query: 930  EGKSLELLHKTQVEGIPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLL 975
            E   L L   T   G+ LA+C +     LA  G               ++ + +G+ R +
Sbjct: 1018 ETWQLRLASSTTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFM 1077

Query: 976  RKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH 1035
                       I S+ TY  RI VGD ++   F  Y  +  +L+    D   R +     
Sbjct: 1078 -----------ITSLRTYFTRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFL 1126

Query: 1036 IDFDTMAGADKFGNIYFVRLPQDVSD--------EIEEDPTGGKIKWEQGKLNGAPNKME 1087
            +D +++A +D+ G+I  +   +D SD           E        +  G++  +  K  
Sbjct: 1127 MDANSVAVSDRKGSIAILSC-KDHSDFGMKHLEYSSPESNLNLNCAYYMGEIAMSIKKGC 1185

Query: 1088 EIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ 1147
             I +    DV+ S   +  +    +++I GT++GS+      SS ++ +    ++  +  
Sbjct: 1186 NIYKLPADDVLRSYGLSKSIDTADDTIIAGTLLGSIFVFAPISS-EEYELLEGVQAKLGI 1244

Query: 1148 EHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLSLDLQRKIADELDRTP 1198
             HP   P+ G DH  +R    P   + ++DGD+  QF    L+L  +  + +  TP
Sbjct: 1245 -HPLTAPVLGNDHNEFRGRENPSQARKILDGDMLAQF----LELTNRQQESVLSTP 1295


>gi|71665916|ref|XP_819923.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70885245|gb|EAN98072.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1791

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 152/417 (36%), Gaps = 145/417 (34%)

Query: 95  KNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLN---------- 144
           +  F ++ +   G+SG R  VP   LAVDP GRAV + A  + KL+  L           
Sbjct: 186 RGKFVRVSEVALGRSGARLTVPSARLAVDPLGRAVFVSALMRLKLLVPLRKHEEYYAQRG 245

Query: 145 ---------------------RDTAA-----------------RLTISSPLEAHKSHTIV 166
                                RD  A                  ++  SP+EAH+  TI+
Sbjct: 246 RRGSGSSLQEGAEEELLMLSPRDAEAGPEGAVMSTKRRPAIRDLMSFGSPVEAHR-QTII 304

Query: 167 YSICGIDCGFDNPIFAAIELDYSEADQ-----DSTGQAASEAQ----------------- 204
           + +C +D   +N  FA +E +  EA+      D +G AA+ +                  
Sbjct: 305 FFMCALDGATENATFATLEQEIPEAETLPSSADGSGNAAATSNVGAGQAFLRVNSSTRQT 364

Query: 205 ------------KNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAE 252
                       K L  Y    GL  V R     V   A+ L+ VP    GP GV+VC +
Sbjct: 365 SHGKSGSSSGRSKQLVVYAFLAGLRQVQRTHLVSVPATAHRLIAVPAAPFGPGGVIVCTD 424

Query: 253 NFVIYKN---QGH-------------PDVRA-----------------VIPRRADLPAE- 278
             +I+ +   Q H             P ++                    PRR D   + 
Sbjct: 425 AELIWYDLLPQLHAGGILGNSMSSSAPPLQTPLLSSGLSSVSLFKTAVPFPRRNDFREQL 484

Query: 279 RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTL-------EHDNEHVSE----------- 320
              +I+S A    +  FF LLQ + GD+F+++L        +D   + +           
Sbjct: 485 YDPMIISHAMTCVRNDFFMLLQDDQGDVFRISLTIMDVQRSYDALRMQQQQRRIGPPTGS 544

Query: 321 ---------LKIKYFDTIPVTASMCVLKSGYLFAASEFG-NHALYQFQAIGADPDVE 367
                    L + YFDTIP T  M + + G++FAASE    H LY+    G   D E
Sbjct: 545 VPPVSVPSPLTVTYFDTIPPTTVMVLFRRGFVFAASESSPTHGLYKIVKDGYRSDEE 601



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 129/578 (22%), Positives = 212/578 (36%), Gaps = 161/578 (27%)

Query: 747  EGVVSVAGNALRVFTIERLGETFN-ETAL-------PLRYTPRRFVLQPKK-KLMVIIET 797
            E V+ VAGN L +F  ++ G T   ET+L       PL    RR +  P + + +++I T
Sbjct: 1167 ELVLGVAGNTLSLFAAQQSGGTSTAETSLEYSFGHTPLSVAGRRLLQHPTRAEYLIVIGT 1226

Query: 798  DQGALTAEEREAAKKECFEAAG------MGENGNGNMDQMENGDDENKYDPLSDEQYGYP 851
            +           A      AA          N +   D  +N  + NK   ++  + G  
Sbjct: 1227 EHRGYGVAALRRASAAAVAAAAEQQRRIQSNNMSNAADDAKNDTNNNKNSHMNSARGGVG 1286

Query: 852  KA---------ESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF---------- 892
             A           D +VS +++ + R+      L  Q+ EA  S    +F          
Sbjct: 1287 IALDKPQRSLNHPDHYVSTLQLYNKRTDRLDPPLYFQEREAVLSAAVGSFVKDFGKEPVV 1346

Query: 893  -----HDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKS-------------- 933
                     HG+   VG +     W +     G +  +RF+    +              
Sbjct: 1347 VAGCAEQYTHGSGCGVGPS-----WTQ-----GRLRAFRFLVSQPAAAGGGGGTASSTLR 1396

Query: 934  LELLH-------KTQVEGIP-------------------LALCQFQGRLLAGIGPV--LR 965
            LE LH       +T  EG+                    L +C   G L  G+GP   L+
Sbjct: 1397 LEQLHDTLIAAAETSAEGLAEGTLAASYRAAPLLDYPSALHICPEVGLLFVGLGPENGLQ 1456

Query: 966  LYDLGKKRLLRKCENKLFPNTIVSINTY-------------------------------- 993
            +Y  G++R LRK      P+ I +I T                                 
Sbjct: 1457 VYAWGQRRFLRKRRLPKVPSRITAIETVFISPPGAASATTATYAPDLFRCGPSNGNIARE 1516

Query: 994  -RDRIYVGDIQESFHFCKYRRDENQ------LYIFADDSVPRWLTAAHHIDFDTMAGADK 1046
             R  I  G + +S      +           L + A D+VPR +T+   +D  T+A AD+
Sbjct: 1517 KRLLIVCGTLDQSVFIATVQPGSGAGGSMSFLMLVARDAVPRSVTSVVCLDERTIAVADR 1576

Query: 1047 FGNIYFVRLPQDV----SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQ 1102
            FG++ F+RLPQ+     ++ + +      ++ E  +       ++EI   H G +VT+L+
Sbjct: 1577 FGSVAFLRLPQNARLGFAEPLHQMSDAELVEAE--RYAAHEQVLQEIAVHHTGQLVTALR 1634

Query: 1103 KASLVPGGGES-------VIYGTVMGSLGAMLAFSSRDDVDFFSHLE----MHMRQEHPP 1151
                 P GG         + Y T +G++GA   F   +D  F +HL+     H+R   P 
Sbjct: 1635 VHDYDPSGGADPSLALRILFYATSLGTVGAYTPFVREEDAVFAAHLQPLVAAHIRC--PL 1692

Query: 1152 LCGRDHMAYRSA------------YFPVKDVIDGDLCE 1177
              G  H+ Y +A              PV +V++GD  +
Sbjct: 1693 QEGSGHLPYNAAGRMTATAAAAVSPTPVHNVVEGDQAQ 1730


>gi|407858994|gb|EKG06903.1| hypothetical protein TCSYLVIO_001978 [Trypanosoma cruzi]
          Length = 1796

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 152/417 (36%), Gaps = 145/417 (34%)

Query: 95  KNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLN---------- 144
           +  F ++ +   G+SG R  VP   LAVDP GRAV + A  + KL+  L           
Sbjct: 189 RGKFVRVSEVALGRSGARLTVPSARLAVDPLGRAVFVSALMRLKLLVPLRKHEEYYAQRG 248

Query: 145 ---------------------RDTAA-----------------RLTISSPLEAHKSHTIV 166
                                RD  A                  ++  SP+EAH+  TI+
Sbjct: 249 RRGSGSSLPEGAEEELLMLSPRDAEAGPEGAVMSTKRRPAIRDLMSFGSPVEAHR-QTII 307

Query: 167 YSICGIDCGFDNPIFAAIELDYSEADQ-----DSTGQAASEAQ----------------- 204
           +S+C +D   +N  FA +E +  EA+      + +G AA+ +                  
Sbjct: 308 FSMCALDGATENATFATLEQEIPEAETLPSSAEGSGSAAATSNVGAGQAFLRVNSSTRQT 367

Query: 205 ------------KNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAE 252
                       K L  Y    GL  V R     V   A+ L+ VP    GP GV+VC +
Sbjct: 368 SHGKSGSSSSRSKQLVVYAFLAGLRQVQRTHLVSVPATAHRLIAVPAAPFGPGGVIVCTD 427

Query: 253 NFVIYKN---QGH---------------PDVRAV---------------IPRRADLPAE- 278
             +I+ +   Q H               P    +                PRR D   + 
Sbjct: 428 AELIWYDLLPQLHGGGILGNSMSSSAPPPQTPLLSSGLSSVSLFKTAVPFPRRNDFREQL 487

Query: 279 RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTL-------EHDNEHVSE----------- 320
              +I+S A    +  FF LLQ + GD+F+++L        +D   + +           
Sbjct: 488 YDPMIISHAMTCVRNDFFMLLQDDQGDVFRISLTIMDVQRSYDALRMQQQQRRIGPPTGS 547

Query: 321 ---------LKIKYFDTIPVTASMCVLKSGYLFAASEFG-NHALYQFQAIGADPDVE 367
                    L + YFDTIP T  M + + G++FAASE    H LY+    G   D E
Sbjct: 548 VPPVSVPSPLTVTYFDTIPPTTVMVLFRRGFVFAASESSPTHGLYKIVKDGYRSDEE 604



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 122/299 (40%), Gaps = 72/299 (24%)

Query: 947  LALCQFQGRLLAGIGPV--LRLYDLGKKRLLRKCENKLFPNTIVSINTY----------- 993
            L +C   G L  G+GP   L++Y  G++R LRK      P+ I +I T            
Sbjct: 1441 LHICPEVGLLFVGLGPENGLQVYAWGQRRFLRKRRLPKVPSRITAIETVFISPPGAASAT 1500

Query: 994  ----------------------RDRIYVGDIQESFHFCKYRRDENQ------LYIFADDS 1025
                                  R  I  G + +S      +           L + A D+
Sbjct: 1501 TATYAPDLFRCGPNNGNIAREKRLLIVCGTLDQSVFIATVQPGSGAGGSMSFLMLVARDA 1560

Query: 1026 VPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV----SDEIEEDPTGGKIKWEQGKLNG 1081
            VPR +T+   +D  T+A AD+FG++ F+RLPQ+     ++ + +      ++ E  +   
Sbjct: 1561 VPRSVTSVVCLDERTIAVADRFGSVAFLRLPQNARLGFAEPLHQMSDAELVEAE--RYAA 1618

Query: 1082 APNKMEEIVQFHVGDVVTSLQKASLVPGGGES-------VIYGTVMGSLGAMLAFSSRDD 1134
                ++EI   H G +VT+L+     P GG         + Y T +G++GA   F   +D
Sbjct: 1619 HEQVLQEIAVHHTGQLVTALRVHDYDPSGGADPSLALRILFYATSLGTVGAYTPFVREED 1678

Query: 1135 VDFFSHLE----MHMRQEHPPLCGRDHMAYRSA------------YFPVKDVIDGDLCE 1177
              F +HL+     H+R   P   G  H+ Y +A              PV +V++GD  +
Sbjct: 1679 AVFAAHLQPLVAAHIRC--PLQEGSGHLPYNAAGRMTATAAAAVSPTPVHNVVEGDQAQ 1735


>gi|72392048|ref|XP_846318.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62175459|gb|AAX69600.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70802854|gb|AAZ12759.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 1834

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 121/316 (38%), Gaps = 100/316 (31%)

Query: 151 LTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDS--------------- 195
           ++  SP+EAH+  T++YSIC +D   +N  FAA+E +  E +                  
Sbjct: 298 ISFGSPVEAHR-QTMIYSICALDGATENATFAALEQELPEVNAGGGTGAAASPPPVVGGV 356

Query: 196 TGQA---------------ASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            GQA               +S   K L  Y    GL  V R    PV   A+ LV VP  
Sbjct: 357 AGQAYLRVNRSALQGGGANSSAKVKQLVVYAFASGLQQVQRTHLVPVPATAHRLVAVPAT 416

Query: 241 GDGPSGVLVCAENFVIYKN------------------------QGHPDV--------RAV 268
             GP GVLVC +  +I+ +                        Q H  +         A 
Sbjct: 417 PFGPGGVLVCTDAEIIWYDVLPQVHGSGLRDGKGGDLTSSSSAQQHGGLGPLALFKTAAP 476

Query: 269 IPRRADLPAE-RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLE--------------- 312
            PRRAD   +    +IVS A+   +  FF LLQ + GD+F+V+L                
Sbjct: 477 FPRRADFREQLYDPMIVSHASTCVRNDFFMLLQDDQGDMFRVSLTLLDVQRSYDALRAAQ 536

Query: 313 ------HDNEHV--------------SELKIKYFDTIPVTASMCVLKSGYLFAASEFG-N 351
                   N  V              S L + YFDTIP T +M + + G++FA SE    
Sbjct: 537 QKQQQLRRNRGVLDAAEAAVPAITVPSPLVVTYFDTIPPTTAMALFRRGFVFAGSESAPT 596

Query: 352 HALYQFQAIGADPDVE 367
           H LY+    G   D E
Sbjct: 597 HGLYKIIKDGYGSDAE 612



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 99/258 (38%), Gaps = 62/258 (24%)

Query: 947  LALCQFQGRLLAGIGPV--LRLYDLGKKRLLRKCENKLFPNTIVSI-------------- 990
            L +C   G L  G+G    L +Y  G++R LRK      P+ I SI              
Sbjct: 1469 LHICADVGLLFVGMGAASGLHVYAWGQRRFLRKRRLPNVPSRITSIETVFATPPNVVSSS 1528

Query: 991  --------------------------NTYRDR---IYVGDIQESFHFCKYRRDENQ---- 1017
                                      N  R+R   I  G + +S      +   +     
Sbjct: 1529 SGTTAATTPGSTTYAADLYRCGPNSTNIVRERRLLIVCGTVDQSVFIATVQPGTSSGSVG 1588

Query: 1018 ----LYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTG-GKI 1072
                L + A D+VPR +T    +D  T+A  D+FGN+ F+RLPQD      E       I
Sbjct: 1589 SMSFLMLIARDAVPRSITCVACLDERTIAAGDRFGNVVFLRLPQDARLGFAEPVQNMTDI 1648

Query: 1073 KWEQGKLNGAPNKMEEIVQFH-VGDVVTSLQKASLVPGGGES-------VIYGTVMGSLG 1124
            +  + +   A  ++ E + FH  G +VTSL+     P  G         + Y T +G++G
Sbjct: 1649 ELVEAERYAASEQLLEEIAFHRAGQLVTSLRVHDYDPSDGTDPTLALRILFYATTLGAVG 1708

Query: 1125 AMLAFSSRDDVDFFSHLE 1142
            A   F   +D    +HL+
Sbjct: 1709 AYTPFVREEDAALAAHLQ 1726



 Score = 47.8 bits (112), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 98  FDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNR 145
           F ++ +   G+SG R  VPG  LAVDP GRAV + A  +QK+V  L +
Sbjct: 185 FVRVSEVDLGRSGARLTVPGARLAVDPLGRAVFVAALMRQKIVVPLRK 232


>gi|261329980|emb|CBH12963.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 1834

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 121/316 (38%), Gaps = 100/316 (31%)

Query: 151 LTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDS--------------- 195
           ++  SP+EAH+  T++YSIC +D   +N  FAA+E +  E +                  
Sbjct: 298 ISFGSPVEAHR-QTMIYSICALDGATENATFAALEQELPEVNAGGGTGAAASPPPVVGGV 356

Query: 196 TGQA---------------ASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG 240
            GQA               +S   K L  Y    GL  V R    PV   A+ LV VP  
Sbjct: 357 AGQAYLRVNRSALQGGGANSSAKVKQLVVYAFASGLQQVQRTHLVPVPATAHRLVAVPAT 416

Query: 241 GDGPSGVLVCAENFVIYKN------------------------QGHPDV--------RAV 268
             GP GVLVC +  +I+ +                        Q H  +         A 
Sbjct: 417 PFGPGGVLVCTDAEIIWYDVLPQVHGSGLRDGKGGDLTSSSSAQQHGGLGPLALFKTAAP 476

Query: 269 IPRRADLPAE-RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLE--------------- 312
            PRRAD   +    +IVS A+   +  FF LLQ + GD+F+V+L                
Sbjct: 477 FPRRADFREQLYDPMIVSHASTCVRNDFFMLLQDDQGDMFRVSLTLLDVQRSYDALRAAQ 536

Query: 313 ------HDNEHV--------------SELKIKYFDTIPVTASMCVLKSGYLFAASEFG-N 351
                   N  V              S L + YFDTIP T +M + + G++FA SE    
Sbjct: 537 QKQQQLRRNRGVLDAAEAAVPAITVPSPLVVTYFDTIPPTTAMALFRRGFVFAGSESAPT 596

Query: 352 HALYQFQAIGADPDVE 367
           H LY+    G   D E
Sbjct: 597 HGLYKIIKDGYGSDAE 612



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 99/258 (38%), Gaps = 62/258 (24%)

Query: 947  LALCQFQGRLLAGIGPV--LRLYDLGKKRLLRKCENKLFPNTIVSI-------------- 990
            L +C   G L  G+G    L +Y  G++R LRK      P+ I SI              
Sbjct: 1469 LHICADVGLLFVGMGAASGLHVYAWGQRRFLRKRRLPNVPSRITSIETVFATPPNVVSSS 1528

Query: 991  --------------------------NTYRDR---IYVGDIQESFHFCKYRRDENQ---- 1017
                                      N  R+R   I  G + +S      +   +     
Sbjct: 1529 SGTTAATTPGSTTYAADLYRCGPNSTNIVRERRLLIVCGTVDQSVFIATVQPGTSSGSVG 1588

Query: 1018 ----LYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTG-GKI 1072
                L + A D+VPR +T    +D  T+A  D+FGN+ F+RLPQD      E       I
Sbjct: 1589 SMSFLMLIARDAVPRSITCVACLDERTIAAGDRFGNVVFLRLPQDARLGFAEPVQNMTDI 1648

Query: 1073 KWEQGKLNGAPNKMEEIVQFH-VGDVVTSLQKASLVPGGGES-------VIYGTVMGSLG 1124
            +  + +   A  ++ E + FH  G +VTSL+     P  G         + Y T +G++G
Sbjct: 1649 ELVEAERYAASEQLLEEIAFHRTGQLVTSLRVHDYDPSDGTDPTLALRILFYATTLGAVG 1708

Query: 1125 AMLAFSSRDDVDFFSHLE 1142
            A   F   +D    +HL+
Sbjct: 1709 AYTPFVREEDAALAAHLQ 1726



 Score = 47.4 bits (111), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 98  FDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNR 145
           F ++ +   G+SG R  VPG  LAVDP GRAV + A  +QK+V  L +
Sbjct: 185 FVRVSEVDLGRSGARLTVPGARLAVDPLGRAVFVAALMRQKIVVPLRK 232


>gi|171691144|ref|XP_001910497.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945520|emb|CAP71632.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1158

 Score = 91.7 bits (226), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 178/847 (21%), Positives = 326/847 (38%), Gaps = 124/847 (14%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +P+ +  A+  N    +   +V++R   +E+ RP   G +    +T + G I  
Sbjct: 3   YIAPIHRPSSVDHALLANVYSEEEQSLVLSRTNRVEVWRPSPDGLLSQAHTTNVNGTIAM 62

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH-QETFGKSGCRRIVPGQYLAV 122
           L + R   ++ D + VG+D      L +NP  +  +  +     G+   R         V
Sbjct: 63  LQKLRPKDAETDLLFVGTDRFEYFTLYWNPETSQMETTNATRDPGEHFMRNSQSLDRAIV 122

Query: 123 DPKGRAVMIGACEKQKLVYVL--NRDTAARL-------------TISSPLEAHKSHTIVY 167
           DP GR + +   E    +  L   +  AA+L               S+ L     H  V 
Sbjct: 123 DPSGRFIAMHLWEGVMTIARLGTRKTNAAQLDWMGQIRLAELFIKASTFLHNETGHPTVA 182

Query: 168 SICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPV 227
            +        +   A   L    +D  +T  +   AQK+     +D+ +           
Sbjct: 183 FLYQTSANAQDSKLATYRL---TSDDRNTVASEFNAQKHRI---IDITI----------A 226

Query: 228 DNGANMLVTV-------------PGGGDGP--SGVLVCAENFVIYKNQGHPDV-RAVIPR 271
           D GANML+ V               G   P   GV+V  E  ++Y +    DV +A +  
Sbjct: 227 DAGANMLIPVRKVEEEVKRHNFRNTGSAKPHLGGVIVVGETRLLYID----DVTKATVES 282

Query: 272 RADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPV 331
           + D    +  + V  A +  +T F   L  +YG +  +T+  D   V  + +        
Sbjct: 283 KLD----KASIFVKWAEYNVQTYF---LADDYGSLHLLTINTDGAEVKGMVLTKIGVTSR 335

Query: 332 TASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLK 391
            + +  L +  LF AS  G+  L+Q   + AD   +    TL++T               
Sbjct: 336 ASELVYLGNEMLFVASHHGDSRLFQLD-LSADKPADKPFLTLIQT--------------- 379

Query: 392 NLVRIEQVESLMPIMDMRIANL-----------FEEEAPQIFTLCGRG--PRSSLRILRP 438
                  + ++ PIMD  + ++            E  + Q   +CG G     SLR +R 
Sbjct: 380 -------ISNIGPIMDFAVMDMGNRGGEDSQLGNEYSSGQARIVCGSGVYKDGSLRSVRS 432

Query: 439 GLAVSEMA--VSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGET--VEEVSD 494
           G+ + ++   +  L      V++++  V +     + VSF   T V        VEEV D
Sbjct: 433 GVGLEDVGLLLEDLGQHVRGVFSLRGAVGEGKMDTLAVSFLTETRVFKFDSEGGVEEVGD 492

Query: 495 -SGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN--EWRTPGKRTIVKVGSNRL 550
             GF LD    LA +L G   ++QV   G+  I  +  +    W    + TI+   +N  
Sbjct: 493 FMGFGLDCQTLLARNL-GGGMILQVTTRGVVLIDAESGVTVATWVPRDENTIINASANGE 551

Query: 551 QVVIALSGGELIYFEVDMTGQLLEVEKHE---MSGDVACLDIASVPEGRKRSRFLAVGSY 607
            +++++ G  L+   +   G  L + K +       VAC+ +A   +G     F   G+ 
Sbjct: 552 WLLLSVEGTGLV--SISTAGNELRLVKEKDISQQDQVACIHVAPQLQGIGVVGFWTSGTV 609

Query: 608 DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQA-SVGGEDGADHPASLFLNAGLQN 666
            + I + +L+P     +   Q  +S P  ++ ++V +  V G        +LF+     +
Sbjct: 610 -SIIDLNTLEPMHGESLRQSQDDASIPREVVLVQVASPKVSG-------PTLFIAMEDGH 661

Query: 667 GVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA--AMLCLSSRPWLGYIHRGRF 724
            V F    D    + S  +   LG R  +L  +     +  ++L  +  P L Y    R 
Sbjct: 662 VVTFNISADF---EFSGKKQVILGTRQARLHLLPQDNDSIYSILATTEHPSLIYGEENRI 718

Query: 725 LLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFV 784
           + + ++ E   +   F ++   + ++      +++  I+R   T +   LP+    RR  
Sbjct: 719 VYSAVTAEEAMFICPFDTEAFPDSIIVATDTQIKISKIDRTRRT-HVRELPMGEMVRRIA 777

Query: 785 LQPKKKL 791
             PK+K+
Sbjct: 778 YSPKEKV 784


>gi|71655974|ref|XP_816541.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70881677|gb|EAN94690.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1801

 Score = 91.7 bits (226), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 152/417 (36%), Gaps = 145/417 (34%)

Query: 95  KNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVL----------- 143
           +  F ++ +   G+SG R  VP   LAVDP GRAV + A  + K++  L           
Sbjct: 188 RGKFVRVSEVVLGRSGARLTVPSARLAVDPLGRAVFVSALMRLKVLVPLRKHEEYYAQRG 247

Query: 144 -----------------------------------NRDTAAR--LTISSPLEAHKSHTIV 166
                                               R  A R  ++  SP+EAH+  TI+
Sbjct: 248 RRGSGGSLQEGAEEELLMLPPRGAEAGPEGAVMSTKRRPAIRDLMSFGSPVEAHR-QTII 306

Query: 167 YSICGIDCGFDNPIFAAIELDYSEADQ-----DSTGQAASEAQ----------------- 204
           + +C +D   +N  FA +E +  EA+      D +G AA+ +                  
Sbjct: 307 FFMCALDGATENATFATLEQEIPEAETLPSSADGSGNAAATSNVGAGQAFLRVNSSTRQT 366

Query: 205 ------------KNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAE 252
                       K L  Y    GL  V R     V   A+ L+ VP    GP GV+VC +
Sbjct: 367 SHGKSGSSSSRSKQLVVYAFLAGLQQVQRTHLVSVPATAHRLIAVPAAPFGPGGVIVCTD 426

Query: 253 NFVIYKN---QGH-------------PDVRAV-----------------IPRRADLPAE- 278
             +I+ +   Q H             P ++                    PRR D   + 
Sbjct: 427 AELIWYDLLPQLHGGGILGNSMSSSAPPLQTPLLSSGLSSVSLFKTAVPFPRRNDFREQL 486

Query: 279 RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTL-------EHDNEHVSE----------- 320
              +I+S A    +  FF LLQ + GD+F+++L        +D   + +           
Sbjct: 487 YDPMIISHAMTCVRNDFFMLLQDDQGDVFRISLTIMDVQRSYDALRMQQQQRRIGPPTGS 546

Query: 321 ---------LKIKYFDTIPVTASMCVLKSGYLFAASEFG-NHALYQFQAIGADPDVE 367
                    L + YFDTIP T  M + + G++FAASE    H LY+    G   D E
Sbjct: 547 VPPVSVPSPLTVTYFDTIPPTTVMVLFRRGFVFAASESSPTHGLYKIVKDGYRSDEE 603



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 121/296 (40%), Gaps = 72/296 (24%)

Query: 947  LALCQFQGRLLAGIGPV--LRLYDLGKKRLLRKCENKLFPNTIVSINTY----------- 993
            L +C   G L  G+GP   L++Y  G++R LRK      P+ I +I T            
Sbjct: 1446 LHICPEVGLLFVGLGPENGLQVYAWGQRRFLRKRRLPKVPSRITAIETVFVSPPGAASAT 1505

Query: 994  ----------------------RDRIYVGDIQESFHFCKYRRDENQ------LYIFADDS 1025
                                  R  I  G + +S      +           L + A D+
Sbjct: 1506 TATYAPDLFRCGPNSGNIAREKRLLIVCGTLDQSVFIATVQPGSGAGGSMSFLMLVARDA 1565

Query: 1026 VPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV----SDEIEEDPTGGKIKWEQGKLNG 1081
            VPR +T+   +D  T+A AD+FG++ F+RLPQ+     ++ + +      ++ E  +   
Sbjct: 1566 VPRSVTSVVCLDERTIAVADRFGSVAFLRLPQNARLGFAEPLHQMSDAELLEAE--RYAA 1623

Query: 1082 APNKMEEIVQFHVGDVVTSLQKASLVPGGGES-------VIYGTVMGSLGAMLAFSSRDD 1134
                ++EI   H G +VT+L+     P GG         + Y T +G++GA   F   +D
Sbjct: 1624 HEQVLQEIAVHHTGQLVTALRVHDYDPSGGADPSLALRILFYATSLGTVGAYTPFVREED 1683

Query: 1135 VDFFSHLE----MHMRQEHPPLCGRDHMAYRSA------------YFPVKDVIDGD 1174
              F +HL+     H+R   P   G  H+ Y +A              PV +V++GD
Sbjct: 1684 AVFAAHLQPLVAAHIRC--PLQEGSGHLPYNAAGRMTATAAAAVSPTPVHNVVEGD 1737


>gi|392566425|gb|EIW59601.1| hypothetical protein TRAVEDRAFT_167065 [Trametes versicolor
           FP-101664 SS1]
          Length = 1263

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 124/506 (24%), Positives = 203/506 (40%), Gaps = 78/506 (15%)

Query: 304 GDIFK--VTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIG 361
           GD F     L  +N+ V+   +   +T P T S+  L S  L+  S FG+    Q   I 
Sbjct: 343 GDAFGRLAMLAFNNDAVAFTLLPLGETSPAT-SLTYLSSQVLYVGSHFGDS---QQLRIH 398

Query: 362 ADPDVEASSSTL-------------------------METEEGF--QPVFFQPRGLKNLV 394
             P   AS  TL                         M+ ++G   +    Q +G   L 
Sbjct: 399 PAPIANASVDTLPIPKGVSTVSPSALASSPSKGKGRSMDLDDGLVREGRVIQTKG-TYLE 457

Query: 395 RIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMA-VSQLPGV 453
            ++  +++ PIMD  +A++     PQ+ T  G     SLR++R      E A +  LPG+
Sbjct: 458 VLQTHDNVAPIMDAVLADIDGSGQPQVITASGARNTGSLRVIRTEADFQEQAKLDGLPGI 517

Query: 454 PSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIG--ETVEEV--SDSGFLDTTPSLAVSLI 509
            + +W V+   ND    ++VVS +  TLVLS    +T+  V  S +GF    P+ A+  +
Sbjct: 518 -TDIWPVRPRFNDATHTHLVVSTSRETLVLSFAGQDTITHVEPSVAGFATHVPTYAIGNV 576

Query: 510 G----------------DDSLM-QVHPSGIRHIREDGRINEWRTPGK------------- 539
                            D  L+ Q+   G+R +  D  +N +   G              
Sbjct: 577 PRRQTTTSGGRTTSSYVDSPLVAQITSEGVRLVEYDPTLNGFTPFGAGWYPKKSGDASMA 636

Query: 540 -RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
            R IV    +  Q V+ LSGG L    +     L  V+  +   ++  +        +  
Sbjct: 637 GRDIVAAAMSPSQFVVGLSGGRLALLNLGANDALQVVKTRDFPDEICAISCTPFDPTKNY 696

Query: 599 SRFLAVGSY-DNTIRILSLD-PDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPA 656
           +  +AV  +  N I +LSLD P   +  +   S+ + P S+L     A    +D    P 
Sbjct: 697 ATHIAVSFWSSNKIAVLSLDSPASYLGPICEVSLPTLPRSILLHNFGAGARPKDADFRP- 755

Query: 657 SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
              L AGL +G +      +  G+L DS++  LG  P  L    V GR  +L   +R  +
Sbjct: 756 --HLLAGLADGNVM--TFALRDGELHDSKASSLGNAPASLSLCAVDGRTVVLAGGARSNV 811

Query: 717 GYIHRGRFLLTPLSYETLEYAASFSS 742
            Y  R R   +P+  + +   A+ ++
Sbjct: 812 LYWDRQRIRPSPVGVKYMARGATLNT 837


>gi|58760264|gb|AAW82046.1| sf3b complex subunit 3 [Trypanosoma cruzi]
          Length = 1800

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 152/417 (36%), Gaps = 145/417 (34%)

Query: 95  KNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVL----------- 143
           +  F ++ +   G+SG R  VP   LAVDP GRAV + A  + K++  L           
Sbjct: 188 RGKFVRVSEVVLGRSGARLTVPSARLAVDPLGRAVFVSALMRLKVLVPLRKHEEYYAQRG 247

Query: 144 -----------------------------------NRDTAAR--LTISSPLEAHKSHTIV 166
                                               R  A R  ++  SP+EAH+  TI+
Sbjct: 248 RRGSGGSLQEGAEEELLMLPPRGAEAGPEGAVMSTKRRPAIRDLMSFGSPVEAHR-QTII 306

Query: 167 YSICGIDCGFDNPIFAAIELDYSEADQ-----DSTGQAASEAQ----------------- 204
           + +C +D   +N  FA +E +  EA+      D +G AA+ +                  
Sbjct: 307 FFMCALDGATENATFATLEQEIPEAETLPSSADGSGNAAATSNVGAGQAFLRVNSSTRQT 366

Query: 205 ------------KNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAE 252
                       K L  Y    GL  V R     V   A+ L+ VP    GP GV+VC +
Sbjct: 367 SHGKSGSSSSRSKQLVVYAFLAGLQQVQRTHLVSVPATAHRLIAVPAAPFGPGGVIVCTD 426

Query: 253 NFVIYKN---QGH-------------PDVRAV-----------------IPRRADLPAE- 278
             +I+ +   Q H             P ++                    PRR D   + 
Sbjct: 427 AELIWYDLLPQLHAGGILGNSMSSSAPPLQTPLLSSGLSSVSLFKTAVPFPRRNDFREQL 486

Query: 279 RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTL-------EHDNEHVSE----------- 320
              +I+S A    +  FF LLQ + GD+F+++L        +D   + +           
Sbjct: 487 YDPMIISHAMTCVRNDFFMLLQDDQGDVFRISLTIMDVQRSYDALRMQQQQRRIGPPTGS 546

Query: 321 ---------LKIKYFDTIPVTASMCVLKSGYLFAASEFG-NHALYQFQAIGADPDVE 367
                    L + YFDTIP T  M + + G++FAASE    H LY+    G   D E
Sbjct: 547 VPPVSVPSPLTVTYFDTIPPTTVMVLFRRGFVFAASESSPTHGLYKIVKDGYRSDEE 603



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 116/294 (39%), Gaps = 68/294 (23%)

Query: 947  LALCQFQGRLLAGIGPV--LRLYDLGKKRLLRKCENKLFPNTIVSINTY----------- 993
            L +C   G L  G+GP   L++Y  G++R LRK      P+ I +I T            
Sbjct: 1445 LHICPEVGLLFVGLGPENGLQVYAWGQRRFLRKRRLPKVPSRITAIETVFXSPPGAASAT 1504

Query: 994  ----------------------RDRIYVGDIQESFHFCKYRRDENQ------LYIFADDS 1025
                                  R  I  G + +S      +           L + A D+
Sbjct: 1505 TATYAPDLFRCGPXXGNIAREKRLLIVCGTLDQSVFIATVQPGSGAGGSMSFLMLVARDA 1564

Query: 1026 VPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE--DPTGGKIKWEQGKLNGAP 1083
            VPR +T+   +D  T+A AD+FG++ F+RLPQ+      E           E  +     
Sbjct: 1565 VPRSVTSVVCLDERTIAVADRFGSVAFLRLPQNARLGFAEPLHQMSDAELXEAERYAAHE 1624

Query: 1084 NKMEEIVQFHVGDVVTSLQKASLVPGGGES-------VIYGTVMGSLGAMLAFSSRDDVD 1136
              ++EI   H G +VT+L+     P GG         + Y T +G++GA   F   +D  
Sbjct: 1625 QVLQEIAVHHTGQLVTALRVHDYDPSGGADPSLALRILFYATSLGTVGAYTPFVREEDAV 1684

Query: 1137 FFSHLE----MHMRQEHPPLCGRDHMAYRSA------------YFPVKDVIDGD 1174
            F +HL+     H+R   P   G  H+ Y +A              PV +V++GD
Sbjct: 1685 FAAHLQPLVAAHIRC--PLQEGSGHLPYNAAGRMTATAAAAVSPTPVHNVVEGD 1736


>gi|407923753|gb|EKG16818.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
           phaseolina MS6]
          Length = 1129

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 169/824 (20%), Positives = 311/824 (37%), Gaps = 107/824 (12%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +P+ +  AI  N   +    +VVA+   LEL      G I    +  ++G +  
Sbjct: 3   YIAPIHRPSSVRHAIKLNLLDSDEESLVVAKSNRLELYVQSVDGLI-LHHAQAVYGKVTM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ-ETFGKSGCRRIVPGQYLAV 122
           L + R      +++ VG+D      + ++P +     +   +       R    G    +
Sbjct: 62  LNRLRPMNEPTEHLFVGTDRYYYFTMAWSPEEKQLKTVKTYQDLADKAARDAQTGDRSLL 121

Query: 123 DPKGRAVMIGACEKQKLVYVLNRDTAAR-----LTISSPLEAHKSHTIVYSICGIDCGFD 177
           DP GR + +   E    V  L      +       +  P+ +      V S   +     
Sbjct: 122 DPTGRFMTLELYEGIVTVVPLTEKGKRKGDPEVSALGEPVPSRIEEMFVRSSAFLHRKSP 181

Query: 178 NPIFAAIELDYSEADQDS---------TGQAASEAQKNLTFYELDLGLNHVSRKWSEPVD 228
                 + L Y E D+DS           Q A   ++++   E   GL        E +D
Sbjct: 182 ESEKPLVALLYEE-DEDSKIRLRLRQLAFQTAGTEEQSVAALEPVEGLK-------EELD 233

Query: 229 NGANMLVTVPGGGDGPS-GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAA 287
            GA+ L+ VPG    P  GVLV  E  + Y N      +A++ +    P +   + V+  
Sbjct: 234 LGASHLIPVPG----PCYGVLVLGETCITYFNDY---TKALVKK----PLQDSTIFVAWE 282

Query: 288 THRQKTLFFFLLQTEYGDI--FKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFA 345
               +    FLL  ++G +  F + L+ ++  V   ++         + +  L +G++F 
Sbjct: 283 QIDNQR---FLLADDFGGLYLFMLLLDDNSGVVEGWRLDKIGETSRASVLVYLDAGHVFV 339

Query: 346 ASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPI 405
            S  G+                   S ++   EG   V            ++   ++ PI
Sbjct: 340 GSHEGD-------------------SQVIRITEGSIEV------------VQTFHNIAPI 368

Query: 406 MDMRI-----------ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP 454
           +D  I           +N +     +I T  G     SLR +R G+ + +       G  
Sbjct: 369 LDFTIMDMGNRSGEGQSNEYSSGQARIVTGSGAFKDGSLRSVRSGVGLEDQGAIGDLGSI 428

Query: 455 SAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTTPSLAVSLIGD 511
           S ++      + E+D  ++VS  N + +  +   GE  E  S  G      +L    + +
Sbjct: 429 SNIFAFSSTASGEYDDTLLVSLVNESRIFCVDADGELDERESFKGLQLDESTLMTKNVPN 488

Query: 512 DSLMQVHPSGIR--HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT 569
             L+QV    +R   +  D  ++EW  P  + I  V SN   +++++ G   I   +  T
Sbjct: 489 YRLLQVTQFAVRIMDLENDMVVSEWHAPEGQVITDVDSNDRFIILSIGGVRAIILSIADT 548

Query: 570 GQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDN-TIRILSLDPDDCMQILSV- 627
              +  +       ++C+   ++P+      F  VG + N T+ IL LD    +Q +S+ 
Sbjct: 549 IHAVAEKDFGADSQISCV---AMPQAADNICF--VGFWQNCTVAILGLDGLQTIQTISLS 603

Query: 628 QSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSR 687
           +  SS P SLL  ++         A+ P +LF+     +G +    +D  T  LS  +S 
Sbjct: 604 EDGSSVPRSLLLTQI--------FANQPPTLFIATA--DGYVVTFSMDPSTFALSGRKST 653

Query: 688 FLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCV 746
            LG +     ++  G G   +      P L Y   GR + + ++ E       F+++   
Sbjct: 654 VLGTQQANFRALPRGNGLYNVFATCEHPSLIYGSEGRLVFSAVTAEKATCVCPFNAEAYP 713

Query: 747 EGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
             +   A   L +  ++    T  +T L +  T RR    P+ K
Sbjct: 714 RSIAIAASGELHLAVVDEERRTHVQT-LHVNETVRRIAYSPQLK 756


>gi|403415203|emb|CCM01903.1| predicted protein [Fibroporia radiculosa]
          Length = 1267

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 175/777 (22%), Positives = 289/777 (37%), Gaps = 149/777 (19%)

Query: 396  IEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPS 455
            ++  E++ PIMD  + +L     PQI    G     +L+I+R G    E AV +     +
Sbjct: 452  LDSYENIAPIMDAVMVDLDGSGQPQIIACSGGRNSGALKIIRTGADFQEQAVIRGIENVT 511

Query: 456  AVWTVKKNVNDEFDAYIVVSFNNATLVLSI----GETVEEVSDSGFLDTTPSLAV----- 506
             +W ++ +  D  D++++ +  + TLV S+      T  + SD GF+  +P+LAV     
Sbjct: 512  DIWPIRSHYEDIIDSHLIATTLHETLVFSLDGRNAVTHMDPSDHGFITRSPTLAVGNIPR 571

Query: 507  ------------SLIGDDSLMQVHPSGIRHIREDGRI-------NEW-RTPGKRTIVKVG 546
                        S +    ++QV    +R I  D  +       + W  T   RTIV   
Sbjct: 572  RATTQNGGRVVSSYVDSSLVLQVSQEKVRVIEHDAALGLFVPVGDGWDATKEGRTIVAAA 631

Query: 547  SNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGD--VACLDIASV---PEGRKRSRF 601
             N  Q V+ LSGG LI   +    Q+ E+ K+   GD     L+I++V   P    +   
Sbjct: 632  INSSQFVLGLSGGRLILLNLGENEQIQEL-KYRDFGDRTYGMLEISAVSCSPFDTTKKYA 690

Query: 602  LAVG-SYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGE---DGAD-HPA 656
              +G S+  T RI  L  +     L+    S P  SL    +  + G +    GAD HP 
Sbjct: 691  TCIGVSFWGTNRIAILSLESATSYLTTICESDPLPSLPRSLLLHNFGQDHNPKGADYHPH 750

Query: 657  SLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWL 716
             L   AGL +G L           L D ++  LG  P  L    V G+ A+    SR  +
Sbjct: 751  VL---AGLVDGTLVS--FSFREKDLKDKKTFALGDVPVALAKSTVDGKPAIFASGSRASV 805

Query: 717  GYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET-FNETALP 775
             Y  R R   +P+  +     AS SS      ++    + L +  +  + +   N   + 
Sbjct: 806  LYWDRQRLHQSPVMIKDAVRGASISSSAFPSCLILATRSTLMIGNVRGVDKMQINSVRMG 865

Query: 776  LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGD 835
            L   PRR    P  ++  +                   C +                   
Sbjct: 866  LD-NPRRIAHHPTLRVFAV------------------ACIQT------------------ 888

Query: 836  DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDK 895
                       + G P+  +    S +++LD  + N       + +E   S+ T++  D 
Sbjct: 889  --------KPNRIGEPQETT----SSLKLLDDTTFNRIASFACESDEEVTSVLTLSSSDV 936

Query: 896  EHGTLLAVGTAKGLQFWP-KRNIVAGYIHIYRF-VEEGKSLELLHKTQVEGIPLALCQFQ 953
                   VGT   +QF P +    +G I ++        S +L+  T V G    L   Q
Sbjct: 937  SSAR-FCVGT---VQFKPGETEPSSGRILLFSLNTGPESSFQLVSSTPVSGCVYQLVSIQ 992

Query: 954  GRLLAGIGPVLRL------YDLG---KKRLLRKCENKLFPNTIV--------------SI 990
            G + A +   +R       +D      K +L K E KL  +T+V               +
Sbjct: 993  GMIAAAVNTSVRTAYVFIAFDPNMTIHKVILFKPE-KLNNSTVVLTKVSEWNHNYSVTGL 1051

Query: 991  NTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNI 1050
              +   + VGD   S  F K   D+  L   A D  P W  +   +D D + GA+   N+
Sbjct: 1052 VVHGCMLIVGDAISSISFVKV--DDTTLESIARDYSPLWPVSVEAMDGDGVIGANSDCNL 1109

Query: 1051 YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV 1107
            +   L +                      +G  + +E    +++GD+V    + SL 
Sbjct: 1110 FTFALQR----------------------SGHRSTLERNGSYYLGDMVNKFLRGSLT 1144


>gi|440301551|gb|ELP93937.1| CPSF A subunit region protein, putative, partial [Entamoeba
           invadens IP1]
          Length = 474

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 130/559 (23%), Positives = 220/559 (39%), Gaps = 117/559 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGK----VLELLRPENSGRIETLVSTE 56
           M     TL QPT I    +G+ S       VV + +    +L+++  +    +ET+V  +
Sbjct: 1   MQFVDYTLVQPTAITTCCSGHVSEDSAVNFVVVKAERKIELLKIVPGDEEDTLETVVQLD 60

Query: 57  IFGAIRSLAQFRLTGSQKDYIVVG-SDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIV 115
            +  ++S++      S  D++++G  +S +++ LE    + +F     + FGK    R  
Sbjct: 61  SYNTVKSVSCVCNINSDVDFVIIGLCNSTQVLRLENGKLEVIF----SDQFGKVS-ERSC 115

Query: 116 PGQYLAVD-PKGRAVMI-------------GACEKQ--KLVYVLNRDTAARLT-----IS 154
           P +Y+  D   G  V +             G  EK    L  V+    A+ L      + 
Sbjct: 116 PSRYIVSDISTGNFVGVAMNGDVTYYKQQHGTFEKHAFSLGNVVCFGCASLLENYYAFLV 175

Query: 155 SPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFY---- 210
             ++  K   ++Y +C  D G         E    E      GQ  +  +KN   Y    
Sbjct: 176 YSIDEKKKKVVIYKLCLPDSG---------EKIKEEDVLIDVGQIYNFPKKNSYGYSRDD 226

Query: 211 ELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIP 270
           EL L ++ V+  +             VP   +    V VC  N V  +  G         
Sbjct: 227 ELYLSIDGVTTSYK------------VPCRENSKESVKVCITNLVYLQQNG--------- 265

Query: 271 RRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIP 330
             ADL                     FLLQ E GD+F V       + +   I Y DTI 
Sbjct: 266 --ADL---------------------FLLQNELGDVFLV-------NTTNKAICYVDTIT 295

Query: 331 VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGL 390
            +     + S  L  ASE  NH + +       P +  ++ T +          ++P   
Sbjct: 296 PSVQW-AINSDSLLCASECQNHLIIKL------PPLLTTNGTSLP---------YRPHAT 339

Query: 391 KNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
                I Q+ S  P+  + + +  +EE  +     G+G RS+++ L  GL+V E     L
Sbjct: 340 VLETDI-QINSNHPLTCLDVVD--DEEVLKFHAFVGKGSRSTVKTLINGLSVEEFMKFPL 396

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLS-IGETVEEVSDSGFLDTTPSLAVSLI 509
              P+ VWT+K   N+    +IV+ F + T VL  + +T+ +  + G    T +L   ++
Sbjct: 397 NN-PTNVWTLK-TYNENMHKFIVIGFKDQTYVLKKVADTLTQCPECGIRLNTQTLHAGML 454

Query: 510 GDDSLMQVHPSGIRHIRED 528
            D +L+Q+H  GI  I E+
Sbjct: 455 IDGTLLQIHSHGIITILEE 473


>gi|342182270|emb|CCC91749.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
          Length = 1783

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 120/301 (39%), Gaps = 85/301 (28%)

Query: 151 LTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDST-----------GQA 199
           ++  SP+EAH+  T++YS+C +D   +N  FAA+E +  E + +S            G+A
Sbjct: 292 VSFGSPVEAHR-QTMIYSLCALDGATENATFAALEQELPEVNGNSGPSGDGVGSTVGGKA 350

Query: 200 --------ASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCA 251
                    +   K L  Y     L  V R    PV   A+ LV VP    GP GVLVC 
Sbjct: 351 FLRINKANINAKSKQLVVYAFSASLQQVQRTHLVPVPATAHRLVPVPASPFGPGGVLVCT 410

Query: 252 ENFVIYKN-------QGHPD------------------VRAVIPRRADLPAE-RGVLIVS 285
           +  +I+ +        G  D                    A  PRR D   +    +I+S
Sbjct: 411 DAEIIWYDVLPQLHGSGMRDGQGGDLPGASQGPHTLFKTAAPFPRRDDFREQLYDPMIIS 470

Query: 286 AATHRQKTLFFFLLQTEYGDIFKVTL-------EHDNEHVSE------------------ 320
            A    +  FF LLQ + GD+F+V+L        +D    +E                  
Sbjct: 471 DAATCVRNDFFMLLQDDQGDVFRVSLTLMDVQRSYDALRAAERRQQQQRRSHGAASASEA 530

Query: 321 -------------LKIKYFDTIPVTASMCVLKSGYLFAASEFGN-HALYQFQAIGADPDV 366
                        L + YFDTIP T++M + + G++FA SE    H LY+    G   D 
Sbjct: 531 GASQPPAVTAPSPLIVTYFDTIPPTSAMALFRRGFVFAGSESAPMHGLYKIIKDGYRTDA 590

Query: 367 E 367
           E
Sbjct: 591 E 591



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 123/584 (21%), Positives = 202/584 (34%), Gaps = 169/584 (28%)

Query: 747  EGVVSVAGNALRVF------TIERLGETFNETALPLRYTPRRFVLQPKKK--LMVIIETD 798
            E V+ VAGN L +F      T    G  ++ ++ PL    RR +  P +   L+VI    
Sbjct: 1155 ELVLGVAGNTLSLFAAGVASTAVEAGLEYSFSSTPLAVAGRRLLQHPTRPEYLLVIGAEH 1214

Query: 799  QGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKW 858
            +G   A  R A+ ++  +      +G+G +      D  +    +  ++        + +
Sbjct: 1215 RGYGVAALRRASSRQGNKEGS--NDGSGPVAGSGRPDTSSGLGGIPLDKPQRSLNHPNTY 1272

Query: 859  VSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF---------------HDKEHGTLLAV 903
             S +++ + R+      +  Q+ EA  S    +F                   HG+ L V
Sbjct: 1273 ASTLQLYNRRTDRLDPPIYFQEGEAVLSATVGSFLKDFGREPVVVLGCADHYTHGSGLGV 1332

Query: 904  GTAKGLQFWPKRNIVAGYIHIYRFV------EEGKSLELLHKTQVEGIPLA--------- 948
            G +     W +     G +  +RFV        G S  +L   Q+   P+A         
Sbjct: 1333 GAS-----WTQ-----GRLRAFRFVVTSVAAPGGTSTSVLRLEQLHDTPIAATTGTLSGP 1382

Query: 949  -------------------------------------LCQFQGRLLAGIGPV--LRLYDL 969
                                                 +C   G L  G+G V  L+++  
Sbjct: 1383 EEDGDDSMVNAPGEEGLNAPRARGVNSAATDYPSALHICVEVGLLFVGMGVVSGLQVFAW 1442

Query: 970  GKKRLLRKCENKLFPNTIVSI-------------------------NTYRDRIY------ 998
            G++R LRK      P  I SI                         +TY   +Y      
Sbjct: 1443 GQRRFLRKRRLPNVPGRITSIETVFTTPPNAVSASSSSAGTATPGSSTYAADLYRCGSNS 1502

Query: 999  ------------VGDIQESFHFCKYRRDENQ--------LYIFADDSVPRWLTAAHHIDF 1038
                         G + +S      +   +         L + A D+VPR +T+   +D 
Sbjct: 1503 TGATREKRLLIVCGTVDQSVFIATVQPGTSSGSMGSMSFLMLIARDAVPRSITSVACLDE 1562

Query: 1039 DTMAGADKFGNIYFVRLPQDVSDEIEE------DPTGGKIKWEQGKLNGAPNKMEEIVQF 1092
             T+A AD+FGN+ F+RLP D      E      DP       E  +       +EEI   
Sbjct: 1563 RTIAAADRFGNVVFLRLPNDARLSFAEPLQHMTDPE----LVEAERYAAHEQLLEEIALH 1618

Query: 1093 HVGDVVTSLQKASLVPGGGES-------VIYGTVMGSLGAMLAFSSRDDVDFFSHLE--- 1142
              G +VT+L+  +  P GG         + Y T +G++GA   F   +D    +HL+   
Sbjct: 1619 RTGQLVTALRVQNYDPSGGTDPSLALRILFYATSLGAVGAYTPFVREEDAALAAHLQPLI 1678

Query: 1143 -MHMR------QEHPPLCGRDHMAYRSAYFP--VKDVIDGDLCE 1177
              H+R        HP       ++   A F   V  VI+GD  +
Sbjct: 1679 ATHVRCLLQSGSGHPAYNTGARLSTAPAAFNSVVHHVIEGDYAQ 1722



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 31/48 (64%)

Query: 98  FDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNR 145
           F ++ +   G+SG R  VPG  LAVDP GRAVM+ A  +QK+V  L R
Sbjct: 183 FVRVSEIDLGRSGARLTVPGARLAVDPLGRAVMVSALMRQKVVVPLRR 230


>gi|390342012|ref|XP_793599.3| PREDICTED: uncharacterized protein LOC588842 [Strongylocentrotus
           purpuratus]
          Length = 1161

 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 131/308 (42%), Gaps = 57/308 (18%)

Query: 318 VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETE 377
           V +LK+++     +   +  L +G +F  S  G+  L +   +  + D   S  T+MET 
Sbjct: 228 VKDLKLEFLGETSIAECLTYLDNGVVFIGSRLGDSQLVR---LNTESDESGSYVTMMET- 283

Query: 378 EGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILR 437
                                  +L PI+DM + +L  +   Q+ T  G     SLRI+R
Sbjct: 284 ---------------------FTNLGPIVDMAVVDLDRQGQGQLVTCSGAYKEGSLRIIR 322

Query: 438 PGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGF 497
            G+ + E A   LPG+   +W +K ++N +FD  +V+SF   T V S            F
Sbjct: 323 NGIGIHEHASIDLPGI-KGIWPLKVDMNSQFDDTLVLSFVGQTRVKS------------F 369

Query: 498 LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALS 557
           ++     +V L+   +   V              +EWR    + I     N  QVV A +
Sbjct: 370 INYITGASVRLVSTPTKRMV--------------SEWRPQSGKNISVASCNSKQVVCA-A 414

Query: 558 GGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSL 616
           G ++ Y E+   G++ +V    M  +VACLDI   P     +   AVG + D + RIL +
Sbjct: 415 GSDIFYLEI-FEGEVRQVSTVTMEHEVACLDIT--PLTGDFTDLCAVGLWTDISARILKI 471

Query: 617 DPDDCMQI 624
              + M +
Sbjct: 472 PTMESMHV 479


>gi|255581562|ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
 gi|223528782|gb|EEF30789.1| spliceosomal protein sap, putative [Ricinus communis]
          Length = 1220

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 79/128 (61%), Gaps = 4/128 (3%)

Query: 399 VESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ--LPGVPSA 456
           ++++ PI+DM + +  +E+  Q+F  CG  P  SLRI+R G++V ++  +     GV + 
Sbjct: 458 IQNIAPILDMSVVDHHDEKQEQMFGCCGVAPEGSLRIIRSGISVEKLLRTAPIYQGV-TG 516

Query: 457 VWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLIGDDSLM 515
            W ++  V D + +++V+SF   T VLS+G +  +V+DS GFL    +LA  L+GD  L+
Sbjct: 517 TWALRMKVTDLYHSFVVLSFVEETRVLSVGVSFADVTDSAGFLPNVCTLACGLVGDGLLV 576

Query: 516 QVHPSGIR 523
           Q+H + +R
Sbjct: 577 QIHQTAVR 584



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 44/264 (16%)

Query: 930  EGKSLELLHKTQVEGIPLALCQFQGR-LLAGIGPVLRL--YDLGKKRLLRKCENKLFPNT 986
            E   L L + T+  G+ L +C +  R  LA  G    +  +     + +RK        T
Sbjct: 969  EAWQLRLAYATKWPGMALTICPYLDRYFLASAGSAFYVCGFPNDNPQRVRKFAIARTRFT 1028

Query: 987  IVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADK 1046
            I+S+  +  RI VGD ++   F  Y  D  +L     D   R +     +D DT   +D+
Sbjct: 1029 IISLTAHFTRIAVGDCRDGILFYSYHEDTRKLEQVYCDPSQRLVADCILLDVDTAVVSDR 1088

Query: 1047 FGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPN-KMEEIVQFHVGDVVTSLQKAS 1105
             G+I  +    D                   + N +P   +     +++G++  S++K S
Sbjct: 1089 KGSIAVLSCSGD------------------SERNASPECNLTLTCAYYMGEIAMSIRKGS 1130

Query: 1106 L---VPG-----GGESVI------YGTVMGS--LGAMLAFS--SRDDVDFFSHLEMHMRQ 1147
                +P      G ++V       + T+M S  LG+++ F   +R++ +    ++  +  
Sbjct: 1131 FSYRLPADDMLMGYDAVTPNNYASHNTIMASTLLGSIIIFIPLTREEHELLEAVQARLVV 1190

Query: 1148 EHP---PLCGRDHMAYRSAYFPVK 1168
             HP   P+ G DH  +RS   PV+
Sbjct: 1191 -HPLTAPILGNDHSEFRSRENPVR 1213



 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 686 SRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQC 745
           +R +G+ P  L  +     A M+ LS RPWL    R     T +S++   ++    S +C
Sbjct: 722 TRRIGVTPVFLVPLTDSLDADMIALSDRPWLLQTARHGLSYTSISFQPSTHSTPVCSVEC 781

Query: 746 VEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETD 798
            +G++ VA N+L +  +    +  N     L  TPR+ +   + +L++++ T+
Sbjct: 782 PKGLLFVAENSLHLVEMVH-SKRLNVQKFHLGGTPRKVLYHSESRLLLVMRTE 833


>gi|409049568|gb|EKM59045.1| hypothetical protein PHACADRAFT_181065 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 1268

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 174/421 (41%), Gaps = 57/421 (13%)

Query: 364 PDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFT 423
           PD +       +T EG        +G + +  + Q  ++ PI+D  +A+  E   PQI T
Sbjct: 436 PDEDYDMRDAFDTPEGRGGKIVNCKG-RFIEELTQYANIAPIVDAVMADPDESGQPQIIT 494

Query: 424 LCGRGPRSSLRILRPGLAVSEMAV-SQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLV 482
             G     SL ++R G    E+AV +++P V + +W ++ + +   D Y++ +    + V
Sbjct: 495 CSGGANTGSLNVVRTGADFQELAVLNEIPNV-TNIWPIRTSFDGPADTYVLATTLYESFV 553

Query: 483 LSI--GETVEEVSDSG--FLDTTPSLAV-------------SLIGDDSLMQVHPSGIRHI 525
           L    G++V  +  S    +   P++AV             + I    ++QV P G+  +
Sbjct: 554 LRFDDGDSVTRIDPSATELVTNRPTIAVANIPRRTTQQNASTYINSSLVVQVTPQGLNLV 613

Query: 526 RED---GRINE--------------WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDM 568
             D   G  N+              WR    + IV    N  Q  +AL+GG  + F +  
Sbjct: 614 EYDVALGAFNKVGDGWSLQKQENPLWRA---KEIVAASINPSQFAVALNGGTFLLFNLSP 670

Query: 569 TGQLLEVEKHEMSG-DVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSL-DPDDCMQIL 625
            GQL  ++  E  G ++A L  A +   +  S F+AV  +  NT+ +LS  DP      L
Sbjct: 671 DGQLNLLQTREFHGKEIAALSCAPLDPSKNFSPFVAVSFWGSNTVTLLSTKDP-----AL 725

Query: 626 SVQSVSSP----PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL 681
              + S+P      SLL     A     D    P   ++ AGL +G +    V     +L
Sbjct: 726 GTHTESAPLPALAHSLLLHNFGAGRSTRDADFQP---YVVAGLVDGTV--ACVSFRNNEL 780

Query: 682 SDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFS 741
            D +   LG  P  L    V G   +L   SR  + Y  R R   +P+  + +   A  +
Sbjct: 781 RDQKLFALGAAPVSLAVSTVDGARMVLATGSRAAVFYWDRQRLRQSPVMLKNVAVGAGLN 840

Query: 742 S 742
           +
Sbjct: 841 T 841


>gi|452838792|gb|EME40732.1| hypothetical protein DOTSEDRAFT_177898 [Dothistroma septosporum
            NZE10]
          Length = 1138

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 256/1260 (20%), Positives = 476/1260 (37%), Gaps = 211/1260 (16%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLV---STEIFGA 60
            Y   + +P+ +  AI  +F    + ++++A+   LE+  P  S    TLV   +  ++G 
Sbjct: 3    YLAPIHRPSSVRHAIKLSFLAPDSEDLILAKANRLEVWSPA-SPTDPTLVHRHTRALYGK 61

Query: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET-FGKSGCRRIVPGQY 119
            +  L + +   SQ D++ VG+D      + +N   N  +         +   R    G  
Sbjct: 62   VTLLHKLKPATSQTDHLFVGTDRYHYFTISWNLKTNDLNTEKAYVDIAEKAARDSQTGDR 121

Query: 120  LAVDPKGRAVMIGACEKQKLVYVL-------NRDTAARLTISS---PLEAHKSHTIVYSI 169
            + +DP  R + I   E   +V VL        +  AA   I     P+        V S 
Sbjct: 122  VHIDPTSRFMTIECYEG--VVNVLPIAHAGKGKRKAADNEIGELHEPIPVRIPELFVRSS 179

Query: 170  CGID-----CGFDNPIFAAI-------------ELDYSEADQDSTGQAASEAQKNLTFYE 211
            C +          +P+FA +             EL+YS + + +   A +E +K      
Sbjct: 180  CFLHRRQPTTKAVDPLFAILHEDSTNKVRLKIRELEYSPSLRPNDEPAVAELEKG----- 234

Query: 212  LDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPR 271
                         + ++ GA++L+ +P       G+LV  E  + Y  +    V    P 
Sbjct: 235  ---------HDVEDTLELGASILIPLPSP---MHGLLVVGETSISYIEEWQYRVANTEPL 282

Query: 272  RADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIP 330
                  E  + +   +   Q+    ++L  +YG ++ + ++ + E      +I       
Sbjct: 283  D-----EATIFVAWCSLDDQR----YVLADDYGKLYLLMVQQNREGEYHGHQIDILGETS 333

Query: 331  VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVF-FQPRG 389
              +++  L  G +F  S  G+  + Q         +   S  +++T     P+  F    
Sbjct: 334  RASTLVYLDGGRVFVGSHQGDSQIIQ---------ISEQSIEVLQTFPNIAPILDFTVMD 384

Query: 390  LKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ 449
            + N        S  P+      N F     +I T  G     SLR +R G+ + +     
Sbjct: 385  MGNR------SSDAPV------NEFSSGQARIVTGSGAFKDGSLRSVRSGVGLEDRGDLG 432

Query: 450  LPGVP-SAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTTPSLA 505
              G P S V++++ +   +    +VVSF + T V      G+  E     GF  +  +L 
Sbjct: 433  SLGAPISEVFSLRSSAAAKLVDTLVVSFVDQTRVFVFDQEGDVEERDEFRGFSLSDATLF 492

Query: 506  VSLIGDDSLMQVHPSGIRHI-REDGRINE-WRTPGKRTIVKVGSNRLQVVIALSGGELIY 563
               + D  ++QV  + I     E G I + W  PG   I  V ++R +++++LSG  L+ 
Sbjct: 493  AGNLPDGRVVQVSSTSILLADAESGMITDTWAAPGGANITAVAADRSKLLLSLSGKALV- 551

Query: 564  FEVDMTGQLLEVE-KHEMSG--DVACLDI-ASVPEGRKRSRFLAVGSYDNTIRILSLDPD 619
              +D++G+ + V+ + E S   +V+C+ + AS+P+       +A    D  +  LSL   
Sbjct: 552  -ALDLSGESIAVQARREFSSTEEVSCIALSASIPD-----TCVAGFWKDGKVAFLSLHN- 604

Query: 620  DCMQILSVQSVS----SPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVD 675
              ++ ++ + V+    + P SL    +          D PA+LF+  GL +G +    ++
Sbjct: 605  --LEAITTERVADDDLAVPRSLSIATIL--------RDQPATLFV--GLADGNVVTYTIE 652

Query: 676  MVTGQLSDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETL 734
             +    +  +S  LG +      +  G G   +      P L Y   GR + + ++ E+ 
Sbjct: 653  SLQKPFAARKSIILGTQQANFAVLPRGDGLQNVFATCEHPSLIYGSEGRMVYSAVTAESA 712

Query: 735  EYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVI 794
                SF+S+     +   + + LR+  ++    T +   L +  T RR     + K    
Sbjct: 713  TSICSFNSNSYGNAIAIASNDELRIAAVDE-ERTTHVQDLFIHETVRRTAYSAELKAFG- 770

Query: 795  IETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAE 854
            +   Q  LTA + E   K  F+                   DE  +  L      Y   E
Sbjct: 771  LGCIQRTLTAGQEEV--KSHFKLV-----------------DEVAFKELD----SYELNE 807

Query: 855  SDKWVSCIRV-LDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWP 913
             +   S IR  LD  S          D    F++ T    D++                 
Sbjct: 808  DELVESVIRCKLDDGSG---------DGAERFAVGTAYLDDQDS---------------- 842

Query: 914  KRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL---G 970
              N   G I I   V E + L+L+ +  V+G    L   +G+++A +   + +YD     
Sbjct: 843  --NTARGRILILE-VTEDRRLKLVTELSVKGACRCLAVCEGKIVAALIKTVIIYDFEFAA 899

Query: 971  KKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDE----NQLYIFADDSV 1026
             K  L K  +       + +    + I V D+ +S    +Y++      + L   A    
Sbjct: 900  SKATLTKKASYRTATAPIDVCVTGNVIAVTDLMKSMSLVEYKKGRTGMPDTLTEIARHFE 959

Query: 1027 PRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKM 1086
              W TA  ++  +T   +D  GN+  + L  D +   EED                  ++
Sbjct: 960  TLWGTAVANVADNTYLQSDAEGNL--IVLQHDTNGFSEED----------------RRRL 1001

Query: 1087 EEIVQFHVGDVVTSLQKASLVPGGGESVI----YGTVMGSLGAMLAFSSRDDVDFFSHLE 1142
                +  +G++V  +++  + P  G  VI      TV GS+  + A       D    ++
Sbjct: 1002 RVTSELLLGEMVNRIRRIDVTPTHGALVIPRAFLATVEGSI-YLFALIVPGKQDLLMRMQ 1060

Query: 1143 MHMRQEHPPLCGRDHMAYRSAYFPVKD--------VIDGDLCEQFPTLSLDLQRKIADEL 1194
             +M          +   +R     V+D         +DG+L E+F     D+Q +I  +L
Sbjct: 1061 NNMASLVKSPGHVEFATFRGFKNQVRDEGANGPSRFVDGELIERFLDCGQDIQEEIIRDL 1120


>gi|255316764|gb|ACU01763.1| putative DNA damage binding protein [Brachypodium distachyon]
          Length = 384

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 170/381 (44%), Gaps = 54/381 (14%)

Query: 851  PKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQ 910
            P +  +     IR+LD ++        L   E   S+ + +F D ++     VGTA  L 
Sbjct: 31   PNSMEESEAHFIRLLDHQTFEFLSTHPLDQYECGCSMISCSFSD-DNNFYYCVGTAYVL- 88

Query: 911  FWPKRNI-VAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL 969
              P+ N    G I ++  VE+G+ L+L+ + + +G   +L  F G+LLA I   ++LY  
Sbjct: 89   --PEENEPTKGRILVFA-VEDGR-LQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 144

Query: 970  -----GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD 1024
                 G   L  +C +      + +  T  D I VGD+ +S     Y+ +E+ +   A D
Sbjct: 145  MTREDGSHELQSECGHHGHILALFT-QTRGDFIVVGDLMKSISLLVYKHEESAIEELARD 203

Query: 1025 SVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD-VSDEIEEDPTGGKIKWEQGKLNGAP 1083
                W+TA   ID D   GA+   N++ VR   D  +DE            E+G+L    
Sbjct: 204  YNANWMTAVEMIDDDIYVGAENSYNLFTVRKNSDAATDE------------ERGRL---- 247

Query: 1084 NKMEEIVQFHVGDVVTSLQKASLV-------PGGGESVIYGTVMGSLGAMLAFSSRDDVD 1136
               E + ++H+G+ V   +  SLV        G   +VI+GT+ G +G ++A    D   
Sbjct: 248  ---EVVGEYHLGEFVNRFRHGSLVMRLPDTEMGQIPTVIFGTINGVIG-IIASLPHDQYV 303

Query: 1137 FFSHLEMHMRQEHPPLCGRDHMAYRSAY-----FPVKDVIDGDLCEQFPTLSLDLQRKIA 1191
            F   L+  + +    +    H  +RS +        ++ +DGDL E F    LDL R   
Sbjct: 304  FLEKLQSILGKFIKGVGSLSHDQWRSFHNEKKTAEARNFLDGDLIESF----LDLNRSKM 359

Query: 1192 DELDRTPG----EILKKLEEI 1208
            +E+ +  G     + K++EE+
Sbjct: 360  EEVSKGMGVSVENLSKRVEEL 380


>gi|378732825|gb|EHY59284.1| DNA damage-binding protein 1 [Exophiala dermatitidis NIH/UT8656]
          Length = 1185

 Score = 87.4 bits (215), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 233/1193 (19%), Positives = 419/1193 (35%), Gaps = 234/1193 (19%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y + + +P+G+  AI  NF    +  ++VA+   LE+      G +  L S  ++G I  
Sbjct: 3    YIVPIHRPSGVRHAIKLNFLDPNSDTLIVAKASRLEIYEQGTEG-LGLLYSKTVYGYITI 61

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNPS-KNVFDKIHQETFGKSGCRRIVPGQYLAV 122
            L + R   SQ D++ VG+D        +N   K +  +        +  R         +
Sbjct: 62   LEKLRPASSQTDHLFVGTDRYHYFTCSWNAEIKQLRTEQSYVDLADNVLRNSKEVDRCHI 121

Query: 123  DPKGRAVMI----GACEKQKLVYVLNRDTAARLTISSPL-------EAHKSHTIVYSICG 171
            DP GR + +    G       V   N+      T +SP+       +      +  S   
Sbjct: 122  DPTGRYMTLELYDGVISVLPFVQPSNKRVKRETTTNSPVGSLGEPVQVRVEELLTRSSAF 181

Query: 172  IDC----------------GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLG 215
            ++                   +NP     EL Y      +T +  + A+  L   +LD G
Sbjct: 182  LETDPDTRENPKLAILWEDNLENPQLKLRELKYYPGGDQATAELETVAE--LHGDQLDKG 239

Query: 216  LNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL 275
            ++H+             + V+ P GG      L+  ++ + Y ++G   +  VI +  + 
Sbjct: 240  VSHL-------------IPVSAPYGG-----FLILGDHAIRYVDRG---LTNVITQALED 278

Query: 276  PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASM 335
             A            R      +LL  ++G +F + +E     VS  ++           +
Sbjct: 279  NATIWTCWTKIDDRR------WLLADDFGRLFFLMIEVSGGEVSSWRLDTVGVASKATCL 332

Query: 336  CVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVR 395
              L  GY+F  S  G+  +   +                  EEG + V            
Sbjct: 333  VYLDEGYVFVGSHSGDSQVVHIE------------------EEGVRVV------------ 362

Query: 396  IEQVESLMPIMDMRIANL-------------FEEEAPQIFTLCGRGPRSSLRILRPGLAV 442
             +   ++ PI+D  I +L             F     +I T  G     ++R +R G+ +
Sbjct: 363  -QSFANIAPILDFTIMDLGRGAEAGGQQALEFSSGQARIVTASGAWQDGTIRSVRSGVGL 421

Query: 443  SEM-AVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGE--TVEEVSDSGFLD 499
             E+  + +L  + + +W +      +    +VVSF   T V        VEEV +   L+
Sbjct: 422  EELGTIGELSHI-TDLWGLSSTGQSDVQDVLVVSFVTETRVFKFDSEAAVEEVDEFHHLE 480

Query: 500  -TTPSLAVSLIGDDSLMQVHPSGIR--HIREDGRINEWRTP-GKRTIVKVGSNRLQVVIA 555
             + P+L  + + D  L Q++ +G+R   +  +    EW+ P     I    +N + +++ 
Sbjct: 481  FSQPTLLAANLPDRKLAQIYETGLRITDLESNMLTLEWKPPDSAAKITAACANSVHLLMV 540

Query: 556  LSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD--IASVPEGRKRSRFLAVGSYDN-TIR 612
              G  L  F          V K         LD  I+SV     +S    V  +   ++ 
Sbjct: 541  EGGHTLHVFHASNNEAKPTVSKS------FPLDSQISSVTVADSQSNVCIVSFWQTASVA 594

Query: 613  ILSLDPDDCMQILSVQSVSSP----PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGV 668
            IL L   D    L  Q++ +P    P S+L   V          D P +LF+   + +G 
Sbjct: 595  ILDLHSLDT---LYTQTLGTPGTDIPRSVLVAHVL--------PDAPPTLFI--AMADGT 641

Query: 669  LFRTVVDMVTGQLSDSRSRFLGLRP------PKLFSVVVGGRAAMLCLSSRPWLGYIHRG 722
            +     D+    LS      LG  P      PK  S      + +     +P L Y   G
Sbjct: 642  VLSYSFDLAKHSLSGMTRILLGTEPVVFKQLPKDNS-PDSNLSNVFASCEQPSLIYSSEG 700

Query: 723  RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRR 782
            R + + ++ E+     +F+ +   E +       L++  I R   T  +T L +  T R 
Sbjct: 701  RIIYSAVNAESASRVCNFNCEAYPEAIAMATPTELKLALIGRERTTQLQT-LSIGETVRC 759

Query: 783  FVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDP 842
               +P  K+  +                   C                ME G        
Sbjct: 760  LTYEPTAKMFAM------------------GCIRRI------------MEGG-------- 781

Query: 843  LSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE-----H 897
                        ++  +S +++ D  S      +ELQD E    I +    D E     +
Sbjct: 782  ------------TEALLSSVKIADEVSFKELDSVELQDRELVECIVSTGSFDTEDESKGY 829

Query: 898  GTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLL 957
            G +  VGT+   +      +  G I ++   +E K L+ + + +V+G   +L    G+++
Sbjct: 830  GDMFVVGTSILEEDDAGEEVTKGRILVFEVNKE-KKLKAVTQIKVKGACRSLAMCDGKIV 888

Query: 958  AGIGPVLRLY-------------DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQE 1004
            AG+   + LY             +L K    R   N L      +       I V D+ +
Sbjct: 889  AGLVKTVVLYGLIPSSTRGEHSLELQKLATYRTSTNPLSLAVTPATQDSPALIAVADLMK 948

Query: 1005 SFHFCKY-----RRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDV 1059
            S    +         E +L+  +      W +A   +  D    AD  GN+  +R     
Sbjct: 949  SLSVLQVLPPDSSNSEYRLHETSRHFATLWSSATAVLRHDEWVVADMEGNLITLR----- 1003

Query: 1060 SDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
                      G +  E      A  ++E   +F +G+VV  +   S++P G +
Sbjct: 1004 ---------QGSLDAENNGAVAARRRLEVTGEFRLGEVVNKI--VSILPPGSQ 1045


>gi|70916982|ref|XP_732699.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56503810|emb|CAH86006.1| hypothetical protein PC301804.00.0 [Plasmodium chabaudi chabaudi]
          Length = 60

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 51/60 (85%)

Query: 1154 GRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            GR+H+ +RS Y PV+ VIDGDLCEQF +L  D+QRK+A +L++TP EIL+KLE+IRNKI+
Sbjct: 1    GREHIFFRSYYHPVQHVIDGDLCEQFSSLPFDVQRKVASDLEKTPDEILRKLEDIRNKIL 60


>gi|356505471|ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
          Length = 1278

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 4/134 (2%)

Query: 393 LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEM--AVSQL 450
           L  I  ++++ PI+DM + +  +E+  Q+F  CG  P  SLRI+R G+ V  +    S  
Sbjct: 455 LCYINPIQNIAPILDMEVVDYHDEKQDQMFACCGVAPEGSLRIIRNGINVENLHRTASIY 514

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
            GV +  WTV+  V D   +++V+SF   T +LS+G +  +V+DS GF     +LA  L+
Sbjct: 515 QGV-TGTWTVRMRVTDSHHSFLVLSFVEETRILSVGLSFTDVTDSVGFQPNVCTLACGLV 573

Query: 510 GDDSLMQVHPSGIR 523
            D  L+Q+H S ++
Sbjct: 574 TDGLLVQIHKSTVK 587



 Score = 46.6 bits (109), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 71/153 (46%), Gaps = 10/153 (6%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
           Y  S  + + + ++  ++ +     + +++  +   +EL+  +  G ++++    +FG +
Sbjct: 28  YYLSKCVLRGSVVLQVLHAHIRSPSSNDVIFGKETSIELVVIDEDGNVQSVCDQPVFGTV 87

Query: 62  RSLA------QFRLTGSQ----KDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGC 111
           + LA      +FR+        KD +V  SDSG++ +L +    + F  +        G 
Sbjct: 88  KDLAILPWNEKFRVARDPQLWGKDLLVATSDSGKLSLLTFCNEMHRFIPVTHIQLSNPGN 147

Query: 112 RRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLN 144
           +  +PG+ LAVD  G  +   A E +  ++ L+
Sbjct: 148 QIYLPGRKLAVDSSGCFIASSAYEDRLALFSLS 180



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 38/175 (21%)

Query: 659 FLNAGLQNGVLFR----------TVVDMVTGQLS------------DSRSRF-------- 688
           ++ AGL+NG+L R          + +++V   LS            D R+ F        
Sbjct: 651 YVLAGLRNGMLLRFEWPAEPCPSSPINIVDTALSSINLVNSVTNAFDKRNDFPSMLQLIA 710

Query: 689 ---LGLRPPKLFSVVVGGR--AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSD 743
              +G+ P  +F V +G    A ++ LS RPWL +  R     + +S++   +     S 
Sbjct: 711 IRRIGITP--VFLVPLGDTLDADIITLSDRPWLLHSARHSLSYSSISFQPSTHVTPVCSV 768

Query: 744 QCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETD 798
           +C +G++ VA N+L +  +    +  N     L  TPR+ +   + K+++++ T+
Sbjct: 769 ECPKGILFVAENSLHLVEMVH-SKRLNMQKFHLEGTPRKVLYHDESKMLLVMRTE 822


>gi|358348106|ref|XP_003638090.1| DNA damage-binding protein, partial [Medicago truncatula]
 gi|355504025|gb|AES85228.1| DNA damage-binding protein, partial [Medicago truncatula]
          Length = 642

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 144/321 (44%), Gaps = 59/321 (18%)

Query: 399 VESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEM--AVSQLPGVPSA 456
           ++++ PI D+   +  +E+  Q+F  CG  P  SLR+++ G+ V ++    S   GV + 
Sbjct: 279 IQNIAPIFDVTSGDYHDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGV-AG 337

Query: 457 VWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLIGDDSLM 515
            WTV+  ++D++ +++V+SF   T +LS+G +  +V+DS GF     +LA  L+ D  L+
Sbjct: 338 TWTVRMKISDQYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLV 397

Query: 516 QVHPSGIRHI--REDGR----------INEWRTPGKRTIVKVGSNRLQVVIALSGGELIY 563
           Q++ S ++     +DG              W        +    +   VV   +   L  
Sbjct: 398 QIYQSAVKLCLPTKDGHSEGIPLSSPICTSWYPDNLNISLGAVGHNFIVVSTSNPCFLFI 457

Query: 564 FEVDMTG----QLLEVEKHEMSGDVACLDIASVPEGRKR--------------------- 598
             V M      ++ E++  E+  +V+C+ I     G+KR                     
Sbjct: 458 LGVRMLSAYQYEIYEMQHLELQNEVSCISIPRTKYGKKRSNSSISENNSSMASTVSGVDI 517

Query: 599 SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
           ++   +G++  ++ I S DP+  + +++  ++S          ++++ G       P  +
Sbjct: 518 NKTFVIGTHRPSVEIWSFDPNGGVTVVACGTIS----------LKSTAGTAKSFCIPQDV 567

Query: 659 --------FLNAGLQNGVLFR 671
                   ++ AGL+NG+L R
Sbjct: 568 RLVFVDKYYVLAGLRNGMLLR 588


>gi|358348118|ref|XP_003638096.1| DNA damage-binding protein, partial [Medicago truncatula]
 gi|355504031|gb|AES85234.1| DNA damage-binding protein, partial [Medicago truncatula]
          Length = 822

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 144/321 (44%), Gaps = 59/321 (18%)

Query: 399 VESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEM--AVSQLPGVPSA 456
           ++++ PI D+   +  +E+  Q+F  CG  P  SLR+++ G+ V ++    S   GV + 
Sbjct: 459 IQNIAPIFDVTSGDYHDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGV-AG 517

Query: 457 VWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLIGDDSLM 515
            WTV+  ++D++ +++V+SF   T +LS+G +  +V+DS GF     +LA  L+ D  L+
Sbjct: 518 TWTVRMKISDQYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLV 577

Query: 516 QVHPSGIRHI--REDGR----------INEWRTPGKRTIVKVGSNRLQVVIALSGGELIY 563
           Q++ S ++     +DG              W        +    +   VV   +   L  
Sbjct: 578 QIYQSAVKLCLPTKDGHSEGIPLSSPICTSWYPDNLNISLGAVGHNFIVVSTSNPCFLFI 637

Query: 564 FEVDMTG----QLLEVEKHEMSGDVACLDIASVPEGRKR--------------------- 598
             V M      ++ E++  E+  +V+C+ I     G+KR                     
Sbjct: 638 LGVRMLSAYQYEIYEMQHLELQNEVSCISIPRTKYGKKRSNSSISENNSSMASTVSGVDI 697

Query: 599 SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
           ++   +G++  ++ I S DP+  + +++  ++S          ++++ G       P  +
Sbjct: 698 NKTFVIGTHRPSVEIWSFDPNGGVTVVACGTIS----------LKSTAGTAKSFCIPQDV 747

Query: 659 --------FLNAGLQNGVLFR 671
                   ++ AGL+NG+L R
Sbjct: 748 RLVFVDKYYVLAGLRNGMLLR 768



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 9/152 (5%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
           Y  S  + + + I+  +  +     + ++V  +   +EL+  +  G ++T+    +FG I
Sbjct: 25  YYLSKCVVRASAILQVLYAHLRSPSSNDVVFGKETSIELVVIDEEGNVQTVCDQPVFGII 84

Query: 62  RSLAQF---------RLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCR 112
           + LA           R     KD +V  SDSG++ +L +    N F  I        G  
Sbjct: 85  KDLAVLPWNDKFCTRRPQTQGKDLLVALSDSGKLSLLTFCNEMNRFFPITHVQLSNPGNI 144

Query: 113 RIVPGQYLAVDPKGRAVMIGACEKQKLVYVLN 144
           R +PG+ LAVD  G  +   A E +  ++ ++
Sbjct: 145 RDLPGRMLAVDSSGCFIAASAYEDRLALFSMS 176


>gi|430814207|emb|CCJ28534.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 904

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 186/928 (20%), Positives = 365/928 (39%), Gaps = 177/928 (19%)

Query: 298  LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
            +L  +YG IF +TL +  +  + +KI       + + +  L + YLF  S +G+  L   
Sbjct: 104  ILADDYGRIFMLTLSNSYKDSNFMKISQIGITSIASVLVYLPNSYLFIGSHYGDSQLVNI 163

Query: 358  QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE 417
                  PD                            + ++   ++ PI D       E  
Sbjct: 164  ------PDC---------------------------LVLQSFPNISPISDFCFVTR-EGR 189

Query: 418  APQIFTLCGRGPRSSLRILRPGLAVSE-MAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF 476
               I T  G     SLRILR  + +++ + +S L G+   +W +      E+ A +V+SF
Sbjct: 190  NEFIVTCSGAYKDGSLRILRYNVEMNKTLEISNLNGI-YGIWGLYLQNEFEYTA-LVLSF 247

Query: 477  NNATLVLSIGETV------EEVSDSGFLDTT-PSLAVSLIGDDSLMQVHPSGIRHI--RE 527
             N T +L +   +      EE  +    +   P+L    + ++    +    I  I  + 
Sbjct: 248  VNETRILKVFHNILNEPEIEEWDNFAIPNAKLPTLVAKNVNNNLFCFISNKSICLIDWKS 307

Query: 528  DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV-DMTGQLLEVEKHEMSGDVAC 586
            +  + EW       I     +     ++L+ G+++ F + +MT  ++E+ +++ + +V+C
Sbjct: 308  NLVLKEWIPTADDIITCACLDTEFASVSLTKGKIVVFSLKNMT--IVEIGEYKFNYEVSC 365

Query: 587  LDIASVPEGRKRSRFLAVGSYD-NTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQ 643
            +DI++       +  ++VG +   +I ILS+     M++L   S+  +  P S+  + + 
Sbjct: 366  IDISN-------NALISVGLWIVPSIHILSIPS---MELLLSHSLLGTVVPRSICIVSLA 415

Query: 644  ASVGGEDGADHPASLFLNAGLQNGVLFRTVVD-MVTGQLSDSRSRFLGLRPPKLFSVVVG 702
            +        + P  L    G+ +G L    +D +  G L  + S+F+      +F++   
Sbjct: 416  S-------MNKPVIL---VGMGDGTLLSYGLDGLDKGTLPINLSKFITPIGMNVFAI--- 462

Query: 703  GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
                    S R  + Y   G+   + ++ + +   +SF S      +V V+ N +++ +I
Sbjct: 463  --------SDRSIIIYGSSGKLSFSSINLKEINCMSSFISSIFSSTIVVVSENIIKIGSI 514

Query: 763  ERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGE 822
            + L +   +T +PL   PRR     K+K+        G LT        K   EA+    
Sbjct: 515  DSLQQLQIQT-IPLGELPRRICYHDKQKVF-------GVLTI-------KLSLEAS---- 555

Query: 823  NGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC-LLELQDN 881
              NGN  Q                             S +++LD  S +      +L+ N
Sbjct: 556  --NGNEVQ----------------------------TSYLKILDVTSFDGILDSFQLELN 585

Query: 882  EAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQ 941
            E    I +V   +++   +  VGT  G     +     G   I  F    K + +  + Q
Sbjct: 586  ECVQCITSVTIDNQD---IFVVGT--GFSLPEEEESSKG--RIILFGVTNKKIWVFSEIQ 638

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLYDLGKK-RLLRKCENKLFPNTIVSINTYRDRIYVG 1000
            V      +     +++AGI  ++ +Y      +              +S+  +   + +G
Sbjct: 639  VNDAVYCIGIIDNKIIAGINALVHIYAYDSSLKNFNVIATYRSTTLCLSLAVHGTHVIIG 698

Query: 1001 DIQESFHFCKYRRDEN--QLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            D+ +S     +   EN  +L   A D  P W+T    +D D   GA+  GN+        
Sbjct: 699  DLMKSVSLLAFINTENGPRLKEVAKDCNPLWMTCVAALDNDLYIGAEAEGNL-------- 750

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI--- 1115
                         + W+        NK++ I +   G++V  ++  +++      +I   
Sbjct: 751  ------------SLFWKDFNTTFEENKLQIISEIKWGELVNQIKPGTILYSENSIIIPKA 798

Query: 1116 -YGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-------AYFPV 1167
             + TV GS+G +     R+ ++F  +L+ +M +    +   +H  +R+       +  P 
Sbjct: 799  TFVTVDGSIGIIFTV-KREYLEFLVNLQSNMGKIISGIGCLNHSNWRAFCNRRKKSNEP- 856

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELD 1195
            K  IDGD  E F  L  D+++K+ D +D
Sbjct: 857  KCFIDGDFVEIFINLDDDIKQKVIDGVD 884


>gi|339235331|ref|XP_003379220.1| DNA damage-binding protein 1 [Trichinella spiralis]
 gi|316978142|gb|EFV61158.1| DNA damage-binding protein 1 [Trichinella spiralis]
          Length = 1329

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 164/815 (20%), Positives = 321/815 (39%), Gaps = 98/815 (12%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
           M  Y +T +  T +  +++G+F+   + ++++ +    E+      G ++ +   ++FG 
Sbjct: 169 MSNYIVTAKAATAVTHSLHGSFTAPGSSDLIIFKNSRFEVHSVSAEG-LQYVTEGKMFGR 227

Query: 61  IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPS--KNVFDKIHQETFGKSGCRRIVPGQ 118
           I +   F   G  K  +V+ +    + I+EY+    K +  +   E FG+     I+   
Sbjct: 228 IGAAKLFTPKGENKALMVIVTLKQDVAIVEYDNGRIKTLASRNISENFGRPASNGIL--- 284

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            L+V P G  + +            NR T+   T S  L    +H   +       GF  
Sbjct: 285 -LSVHPDGEVIGLRIMSSTFKCITWNRATSKLSTYS--LNYSLTHLSDFVFLH---GFQF 338

Query: 179 PIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE-PVDNGANMLVTV 237
           P+ A I         D  G+     + +L   E + G       WS   ++  A+ L+ V
Sbjct: 339 PVIALIY-------GDLVGRHVITCRISLDEQEFENG------PWSRGHIEWEAHTLIAV 385

Query: 238 PGGGDGPSGVLV--CAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLF 295
           P       GV+V  C+    I  N     V          P      IV+        L 
Sbjct: 386 P---PPLCGVIVVGCSSLLYIRDNSTISTVS---------PPFLSKSIVNCYDAAPDGLT 433

Query: 296 FFLLQTEYG-DIFKVTLEHDNEHVSELKIKYFDTIPVTA---SMCVL-KSGYLFAASEFG 350
           +FL Q +    + K+ +E D E    L       + VT+   S+  + K   LF  S   
Sbjct: 434 YFLGQLDGTLSLLKLDIETDAEGKVTLSRMRATILGVTSPPDSLSYMHKESLLFVGSRIA 493

Query: 351 NHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI 410
           +  L +  ++    +                              +E   +L PI+DM +
Sbjct: 494 DSKLLRLNSLAICDE--------------------------TWTEVESFPNLAPIVDMVL 527

Query: 411 ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD- 469
            ++ ++   +I +  G G   SL+++R G+ + E+A   +P V + VW ++   N+ +D 
Sbjct: 528 VDMAKQGQGEIISCSGYGKDGSLKVIRSGIGLYELARLDIPFV-NRVWALRYITNEPYDN 586

Query: 470 AYIVVSFNNATLVLSIGET-VEEVSDSGFLDTTPSLAVSL---IGDDSL--MQVHPSGIR 523
            +I+    N+T+V+   E   E++S  G L+T     V+    + D +L  +QV  S I+
Sbjct: 587 LFILGVVGNSTMVIKFQENQAEQISVDG-LETAEQTFVAANCHMADGALAIVQVVRSKIQ 645

Query: 524 --HIREDGR-INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
                 DGR ++EW+ P    +           + ++   ++++      +L  V    M
Sbjct: 646 LADASLDGRKLDEWKFPDGSEVSLAACEGTSGRLLVACRHILHYFNVRDDRLQLVTTRTM 705

Query: 581 SGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFL 640
             + +C++   + +  +      VG +             C+Q+L V S+   P   ++L
Sbjct: 706 ENEASCVEFGCLSD--EGVGVCIVGHWTKI----------CLQLLFVPSLE--PVQTVYL 751

Query: 641 EVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVV 700
           E  + +         ++++L   L +G L    +D  +  L D +   LG     L    
Sbjct: 752 EDSSVIRSALMCKFESNMYLFVSLADGNLIFYSIDENSFALIDGKKVSLGTDSISLKMFK 811

Query: 701 VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVF 760
                ++L  + +P + Y++  +   + L    + Y     +     GV+   G  L + 
Sbjct: 812 TKNTLSILACTEKPTVIYMNNNKLQFSSLDSSAIYYMTPLFTSAYDNGVLFTNGQCLTIG 871

Query: 761 TIERLGETFNETALPLRYTPRRFVLQPKKKLMVII 795
            ++ + +  +  ++ L  TPRR V QP+ KL+ ++
Sbjct: 872 VVDEI-KKLHIRSVVLGETPRRIVWQPENKLVGVL 905



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)

Query: 920  GYIHIYRFVEEGK---SLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY---DLGKKR 973
            G + + R+  +G+   SL L+H+ +V G   A+  F+ +LL  +   + L+   D+   +
Sbjct: 1026 GRLLMLRYERDGQGNSSLNLVHEKEVNGCVYAMASFKSKLLVAMNSSVLLFEWSDVTGLQ 1085

Query: 974  LLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAA 1033
            L+  C   LF  T + +    + I VGDIQ S    +Y   E+     A D  P W++A 
Sbjct: 1086 LVSSC--SLFV-TAMHLKVRDEVILVGDIQRSIAVLRYVPSESSFVEEARDYHPNWISAI 1142

Query: 1034 HHIDFDTMAGADKFGNI 1050
              ID D    A+   NI
Sbjct: 1143 EVIDNDYFMAAENSLNI 1159


>gi|356570929|ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
          Length = 1258

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 4/134 (2%)

Query: 393 LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEM--AVSQL 450
           L     ++++ PI+DM + +  +E+  Q+F  CG  P  SLRI+R G+ V  +    S  
Sbjct: 455 LCYTNPIQNIAPILDMEVVDYHDEKHDQMFACCGVAPEGSLRIIRNGINVENLHRTASIY 514

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
            GV S  WTV+  V D   +++V+SF + T +LS+G +  +V+DS GF     +LA  L+
Sbjct: 515 QGV-SGTWTVRMKVTDSHHSFLVLSFLDETRILSVGLSFTDVTDSVGFQPNVCTLACGLV 573

Query: 510 GDDSLMQVHPSGIR 523
            D  L+Q+H S ++
Sbjct: 574 TDGLLVQIHRSTVK 587



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 131/629 (20%), Positives = 248/629 (39%), Gaps = 139/629 (22%)

Query: 659  FLNAGLQNGVLFR----------TVVDMVTGQLS------------DSRS---------- 686
            ++ AGL+NG+L R          + ++MV   LS            D R+          
Sbjct: 645  YVLAGLRNGMLLRFEWPAEPCPSSPINMVDTALSSTNLVNSVTNAFDKRNDLPSMLQLIA 704

Query: 687  -RFLGLRPPKLFSVVVGGR--AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSD 743
             R +G+ P  +F V +G    A ++ L+ RPWL +  R     T +S++   +    S  
Sbjct: 705  IRRIGITP--IFLVPLGDTLDADIIVLADRPWLLHSARQGLSYTSISFQPATHVTPVSCV 762

Query: 744  QCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGA-- 801
            +  +G++ VA N+L +  +   G+  N     L  TPR+ +   + K+++++ T+     
Sbjct: 763  EFPKGILFVAENSLHLVEMGH-GKRLNVQKFHLEGTPRKVLYHDESKMLLVMRTELNCGP 821

Query: 802  -----LTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKY--DPLSDEQYGYPKAE 854
                    +    +    F    +GE G  +M+ +  G ++       LS   +  P  E
Sbjct: 822  CLSDICCVDSLSGSVLSSFRLE-LGETGK-SMELVRVGSEQVLVVGTSLSSGPHTMPTGE 879

Query: 855  SDKWVSCIRVLDPRSANTTCLLELQDNEA-AFSIC---------TVNFHDKEHGTLLAVG 904
            ++     + VL        CL  +Q++++ + + C         T  FH+        + 
Sbjct: 880  AESCKGRLLVL--------CLDHVQNSDSGSMTFCSKAGSSSQKTSPFHEIV-TYAPELL 930

Query: 905  TAKGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGR-LLAGIGPV 963
            ++  L   P  N   G   I     E     L + T+  G+ L +C +  R  LA  G  
Sbjct: 931  SSSSLGSSPDDNSSDG---IKLHENEVWQFRLAYATKWPGVVLKICPYLDRYFLATAGNA 987

Query: 964  -------------LRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCK 1010
                         +R Y +G+ R +           I S+  +  RI VGD ++      
Sbjct: 988  FYVCGFPNDNPQRVRRYAMGRTRYM-----------ITSLTAHLTRIAVGDCRDGILLYS 1036

Query: 1011 YRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGG 1070
            Y  +  +L +  +D   R +     +D DT   +D+ G+I  +      SD +E++    
Sbjct: 1037 YHEEAKKLELLYNDPSQRIVADCILMDADTAVVSDRKGSIAVL-----CSDHLEDNA--- 1088

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKAS---------LVPGGG---------- 1111
                      GA   M     + + ++  S++K S         ++ GG           
Sbjct: 1089 ----------GAQCNMTLSCAYFMAEIAMSIKKGSYSYRLPADDVLEGGNGPKTNVDSLQ 1138

Query: 1112 ESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEH--PPLCGRDHMAYRS--AYFPV 1167
             ++I  T++GS+   +   SR++ +    ++  +   H   P+ G DH  +RS      V
Sbjct: 1139 NTIIASTLLGSIMIFIPL-SREEYELLEVVQARLVVHHLTAPVLGNDHHEFRSRENRVGV 1197

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
              ++DGD+  QF  L+  +Q+K+   L++
Sbjct: 1198 PKILDGDILTQFLELT-SMQQKMILSLEQ 1225



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 69/153 (45%), Gaps = 10/153 (6%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
           Y  S  + + + ++  ++ +     + ++V  +   +EL+  +  G ++++    +FG +
Sbjct: 28  YYLSKCVFRGSVVLHVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVFDQPVFGTL 87

Query: 62  RSLA------QFRLTGSQ----KDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGC 111
           + LA      +FR         KD +V  SDSG++ +L +    + F  +        G 
Sbjct: 88  KDLAILPWNEKFRAARDPQLWGKDLLVATSDSGKLSLLTFCNEMHRFVPVTHIQLSNPGN 147

Query: 112 RRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLN 144
           +   PG+ LAVD  G  +   A E +  ++ L+
Sbjct: 148 QMDFPGRKLAVDSSGCFIAASAYEDRLALFSLS 180


>gi|19114492|ref|NP_593580.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces pombe 972h-]
 gi|46395602|sp|O13807.1|DDB1_SCHPO RecName: Full=DNA damage-binding protein 1; AltName:
           Full=Damage-specific DNA-binding protein 1
 gi|2330717|emb|CAB11219.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces pombe]
          Length = 1072

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 160/838 (19%), Positives = 322/838 (38%), Gaps = 93/838 (11%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   L +P+ I  A+   F    +  ++VA+   LE+   EN+ R+  + S  IF  I +
Sbjct: 3   YVTYLHKPSSIRNAVFCKFVNASSWNVIVAKVNCLEVYSYENN-RLCLITSANIFAKIVN 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPGQYLAV 122
           +  F+   S  D+I+V +DS R   L ++ + N V + I  +   +   R    G  L V
Sbjct: 62  VKAFKPVSSPTDHIIVATDSFRYFTLFWDANDNTVSNGIKIQDCSERSLRESQSGPLLLV 121

Query: 123 DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTI-VYSICGIDCGF----D 177
           DP  R + +   +    +  + +     +T  +    H + ++ +  +  +D        
Sbjct: 122 DPFQRVICLHVYQGLLTIIPIFKSKKRFMTSHNNPSLHDNFSVRIQELNVVDIAMLYNSS 181

Query: 178 NPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTV 237
            P  A +  D       ST +     Q+     E D+  + +      P +NG       
Sbjct: 182 RPSLAVLYKDSKSIVHLSTYKINVREQE---IDEDDVVCHDIEEGKLIPSENG------- 231

Query: 238 PGGGDGPSGVLVCAENFVIY--KNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLF 295
                   GV V  E +V Y  K+     +    P  A  P+      +S          
Sbjct: 232 --------GVFVFGEMYVYYISKDIQVSKLLLTYPITAFSPS------ISNDPETGLDSS 277

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            +++  E G ++K      +E VS ++++      + + +  L   +LF  S F N  L 
Sbjct: 278 IYIVADESGMLYKFKALFTDETVS-MELEKLGESSIASCLIALPDNHLFVGSHFNNSVLL 336

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
           Q       P +  ++  L                L+N V I       PI D  I +  +
Sbjct: 337 QL------PSITKNNHKL--------------EILQNFVNIA------PISDFIIDD--D 368

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
           +    I T  G     +LRI+R  + +  +A+ ++ G+    ++V    N  +D YI +S
Sbjct: 369 QTGSSIITCSGAYKDGTLRIIRNSINIENVALIEMEGIKD-FFSVSFRAN--YDNYIFLS 425

Query: 476 FNNATLVLSIG-ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEW 534
               T  + +  E V   +     + +     ++ G+  ++Q+    IR + +  +++ W
Sbjct: 426 LICETRAIIVSPEGVFSANHDLSCEESTIFVSTIYGNSQILQITTKEIR-LFDGKKLHSW 484

Query: 535 RTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPE 594
            +P   +I    S    V +A++GG +++FE      + EV +++   +V+ L       
Sbjct: 485 ISP--MSITCGSSFADNVCVAVAGGLILFFE-----GITEVGRYQCDTEVSSLCFT---- 533

Query: 595 GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
                  + VG +   I +L+   D      S++ ++  P S+++ +     GG      
Sbjct: 534 ---EENVVYVGLWSADIIMLTYCQDGISLTHSLK-LTDIPRSIVYSQKYGDDGGTLYVST 589

Query: 655 PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
                L    QNG +    +          R   LG+ P  L       + A+  L  +P
Sbjct: 590 NNGYVLMFNFQNGQVIEHSL----------RRNQLGVAPIILKHFDSKEKNAIFALGEKP 639

Query: 715 WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            L Y    + ++TPLS   +   +S+ +      ++    + + +  +  +  + N   +
Sbjct: 640 QLMYYESDKLVITPLSCTEMLNISSYVNPSLGVNMLYCTNSYISLAKMSEI-RSLNVQTV 698

Query: 775 PLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQME 832
            ++  PRR         ++ ++ ++   T E+R  +    +E   + E  +   ++ E
Sbjct: 699 SVKGFPRRICSNSLFYFVLCMQLEESIGTQEQRLLSFLRVYEKNTLSEIAHHKFNEYE 756


>gi|402223178|gb|EJU03243.1| hypothetical protein DACRYDRAFT_115454 [Dacryopinax sp. DJM-731
           SS1]
          Length = 1175

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 183/807 (22%), Positives = 308/807 (38%), Gaps = 150/807 (18%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFGAI 61
           Y +T  QPT  + +I G+F+G+ + ++VVA+   +EL  L PE   R+  L   EI+G I
Sbjct: 3   YVVTHHQPTAAVDSIRGDFTGSGSVQLVVAKVNRVELYNLSPEGLKRVCDL---EIWGTI 59

Query: 62  RSLAQFRLTGSQKDYIVVGSD--SGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPGQ 118
            ++A+ +    Q  +I+V +D     ++ L Y+P+ N  F+ +H  +      R     Q
Sbjct: 60  TNIAEVKREDKQS-HILVTTDHPDPYLLSLAYSPTPNPQFEVVHSASLKARAGRIAEYCQ 118

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAAR------------------LTISSPL--- 157
              V P GR  +  A      V V   D   +                  L+ SSP    
Sbjct: 119 TSIVHPSGRVAVTSAYTGSLKVTVFGEDGKGKDIDVRIREQNLLSFAFLPLSTSSPFTLA 178

Query: 158 -----EAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYEL 212
                +  K H +  S+  +                   +  ST   AS      T +  
Sbjct: 179 LLHIDQNGKRHLVTRSLKHV------------------PEPGSTKSLASLDISEPTAHIP 220

Query: 213 DLGLNHVSRKWSEPVDNGANMLVTVPGGGDGP-SGVLVCAEN---FVIYKNQGHPDVR-- 266
           D+ L+    +W       A  +V VP    G  +GV+V  E    +   K +G PD +  
Sbjct: 221 DINLDD---EWE------ATSVVGVPPPRPGARAGVMVFGEGQARWYAVKEEGAPDPKGK 271

Query: 267 ----------------AVIPR--RADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFK 308
                           +  PR   A +    G +  + A   +K     L+  EYG ++ 
Sbjct: 272 RRSSTAGSPTQEKKGKSKPPRVEEAKVGLPWGRIAATCAIDEEK----LLVSDEYGKLYL 327

Query: 309 VTLEHDNEH--VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDV 366
           + L        V  ++ +    I   +S+  L S Y F  S+ G+      Q I   P  
Sbjct: 328 LALHRRQSEGPVVSIQREALGEISSPSSITHLTSSYFFVTSKCGDS-----QLISLTPSA 382

Query: 367 EASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCG 426
                                 G  N+  ++   +L PI D  + +  +    QI T  G
Sbjct: 383 IC--------------------GTGNIAVLDTHLNLAPISDFVVTDPEKIGQQQIVTASG 422

Query: 427 RGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIG 486
           R    SLR++R G+A  E+ + +      +++ +K N + E+  Y+V S  + T + S+ 
Sbjct: 423 RMNTGSLRVVRSGVAFEELGLLEQVMNTRSIFPLKINFDAEYHLYLVTSSLHRTTLYSMR 482

Query: 487 --------ETVEEVSDSGFLDTTPSLAVSLI-GDDSLMQVHPSGIRHIREDGRINEWRTP 537
                   E V+E    G +   P+LA   I  DD  +QV    +  I  D    E R+ 
Sbjct: 483 GDDSSPQFEEVDESEARGIVRQVPTLAAGNIREDDIFVQVTAGSVVAI--DLITWEQRSI 540

Query: 538 GKR--TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEG 595
            K    IV    N  +VV  L GG L++  +    Q +     +  G     +I+ +   
Sbjct: 541 WKPHVEIVCAAVNGQRVVAGLKGGYLVHL-IPQRDQFIVANDWKSPGSWGLTEISCIALD 599

Query: 596 RKRS----RFLAVGSY-DNTIRILSL-DPDDCMQILSVQSVSSPPESLLFLEVQASVGGE 649
              S     + A+G +  N ++I  L D     + L +    SP + L    +  + G  
Sbjct: 600 PTLSAELGNYAAIGFWGTNQVKIFYLGDETHRFEELKLAEPISPEDHLPVSTILTTFG-- 657

Query: 650 DGADHPASLFLNAGLQNGVL--FRTVVDMVTGQLS----DSRSRFLGLRPPKLFSVVVGG 703
             ++ P    L  GL NG +  +    ++V G+ S    D +   LG +P  L +    G
Sbjct: 658 -TSNRP---HLLVGLGNGTISSYALKTEIVLGEPSVRATDKKIFSLGTKPIMLNACTDLG 713

Query: 704 RAA-MLCLSSRPWLGYIHRGRFLLTPL 729
           R + +     RP L ++   R   +P+
Sbjct: 714 RESNIFACGDRPALLFLKNDRLTASPI 740


>gi|342885673|gb|EGU85655.1| hypothetical protein FOXB_03801 [Fusarium oxysporum Fo5176]
          Length = 1160

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 189/854 (22%), Positives = 324/854 (37%), Gaps = 139/854 (16%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + + T I  A+  N       ++VVA+   LE+ R    G +  L +  I G+I  
Sbjct: 3   YVAPIHRATSIRHALRANVLSPDIDDLVVAKANRLEIWRLTEEGLV-CLQTKLIHGSIAM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ--ETFGKSGCRRIVPGQYLA 121
           L   R  GS+ D + +G+D      L +NP     + I +  E   +   R         
Sbjct: 62  LQCLRPKGSETDLLFIGTDRLHYFNLVWNPLTKQLETIERVIEDLAEPYMRHSSSQNKCL 121

Query: 122 VDPKGRAVMIGACEKQKLVYVL-----NRDTAARLTISSPLEAH-KSHTIVYSICGIDCG 175
           VDP GR + +   E    V+ L     + +   RL      E   K+ T ++S  G    
Sbjct: 122 VDPTGRFLAMHLWEGVLNVFKLPIRKGSTNKLERLDQVRLTELFMKASTFIHSRTG---- 177

Query: 176 FDNPIFAAI---ELDYSEA-------DQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE 225
             +P  A +   +L+  EA         D  G   S+   +    ELD+ +         
Sbjct: 178 --HPTIAFLYKTQLEQEEARLVIYRLTHDDKGNTVSKFDPHKD-RELDVVIP-------- 226

Query: 226 PVDNGANMLVTVP-------------GGGDGPSGVLVCAENFVIY-KNQGHPDVRAVI-- 269
             D  A+ML+ VP             G      G+LV  E  + Y     H  V +V+  
Sbjct: 227 --DPYASMLIPVPLDEEKRYHVRNTEGAKAHLGGLLVIGETLLTYFDGLTHRSVSSVLQD 284

Query: 270 PRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH---------VSE 320
           PR          + VS A +       +LL  +YG +  +T++ + E          +  
Sbjct: 285 PR----------IFVSWAEYDGT---HYLLADDYGRLDLLTIDTNLETTGVVVTGMTLEP 331

Query: 321 LKIKYFDTIPVTASMCV-LKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEG 379
           LKI     I   AS  V L    LF AS  G+  LYQ        DVE+++ TL+++   
Sbjct: 332 LKIGRSPAITSRASNLVYLGDSTLFVASHHGDSQLYQI-------DVESATVTLVQSFSN 384

Query: 380 FQPVFFQPRGLKNLVRIEQVESLMPIMDM-------RIANLFEEEAPQIFTLCGRGPRSS 432
             P+                     IMDM       +  N F     +I   CG     S
Sbjct: 385 NAPILD-----------------FSIMDMGNREGDAQAGNAFSSGQSRIVAGCGAYRDGS 427

Query: 433 LRILRPGLAVSEMAV-SQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGET--V 489
           LR +R G+ + +  V  +L G    ++T++   +D  D  +VVS    T VLS      +
Sbjct: 428 LRSIRSGVGLEDRGVLDELEGT-RGLFTLRSYGSDLVDT-LVVSAITETRVLSFDREGGI 485

Query: 490 EEV-SDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVG 546
           EE+ S  G    T +L  S + +  L+Q+ P  +  +  +G    ++W  P  ++I +  
Sbjct: 486 EEIYSFQGMSLDTETLLASNLPNGQLLQITPRSVVLLDPEGGTVTSKWDVPSGKSITRAS 545

Query: 547 SNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGS 606
           +N    ++++ G  L+   + +    + V++ + +       I+ +   R       VG 
Sbjct: 546 ANSKWALLSVDGTSLVSLNL-LQNLAVNVQQSQNNSGSQADQISCIHAARDPPDLGVVGW 604

Query: 607 YD----NTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL---F 659
           +     + I + SL P     +   +  ++ P  +  +++           HP  +    
Sbjct: 605 WSSGQISLIDMASLKPLHGESMRQTEDSATVPRDIALVQL-----------HPPEISGPT 653

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGY 718
           L   +++G +    V      +S  +S  LG  P +L  +    G + +   +    L Y
Sbjct: 654 LLVAMEDGNVVTFNVSTKDFAVSGRKSVTLGSNPARLHILPQQDGTSNVFVTTEHASLIY 713

Query: 719 IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI--ERLGETFNETALPL 776
              GR + +  + +   + A F S    + V+      +R+  +  ERL       ALP+
Sbjct: 714 SAEGRVIFSATTADDATFVAPFDSHAFPDSVILSTDQHIRICHVDKERLTHV---KALPV 770

Query: 777 RYTPRRFVLQPKKK 790
             T RR    P  K
Sbjct: 771 NETVRRVAYSPGLK 784


>gi|46121747|ref|XP_385428.1| hypothetical protein FG05252.1 [Gibberella zeae PH-1]
          Length = 1161

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 180/848 (21%), Positives = 326/848 (38%), Gaps = 127/848 (14%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + + T I  A+  N    +  +++VA+   LE+ R    G +    +  I G I  
Sbjct: 3   YVAPIHRATSIRHALRANVIDPEIDDLIVAKANRLEIWRLTEEGLV-CQQTKLIHGTISM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ--ETFGKSGCRRIVPGQYLA 121
           L + R  GS+ D + +G+D  +   L +N +    + I +  E   +   R+        
Sbjct: 62  LQRLRPKGSETDLLFIGTDRLQYFNLIWNDATKQLETIERVIEDLSEPYMRQSQSQNKCL 121

Query: 122 VDPKGRAVMIGACEKQKLVYVL--NRDTAARLTISSPLEA----HKSHTIVYSICGIDCG 175
           VDP GR + +   E    V+ L   + +  +L +   +       K+ T  YS       
Sbjct: 122 VDPTGRFLAMHLWEGVLNVFKLPTRKGSTNKLEVLDQVRLTELFMKASTFTYSYT----- 176

Query: 176 FDNPIFAAIELDYSEADQDSTGQAA---SEAQKNLTFYELDLGLNHVSRKWS-EPVDNGA 231
            ++P  A   L  ++ DQ+ T       +   K  T  + D    H  R+   E  D  A
Sbjct: 177 -NHPTIAF--LYKTQMDQEETRLVIYRLTHDDKGNTVSKFD---PHKDRELDIEIPDPYA 230

Query: 232 NMLVTVP-------------GGGDGPSGVLVCAENFVIYKN-QGHPDVRAVI--PRRADL 275
           +ML+ VP             G      G++V  E  + Y + Q H  V A +  PR    
Sbjct: 231 SMLIPVPLDEEKRYNVRNNQGAKPHLGGLVVVGETLLTYYDGQTHRSVSAGLKDPR---- 286

Query: 276 PAERGVLIVSAATHRQKTLFFFLLQTEYGDI----FKVTLEHDNEHVSELKIK--YFDTI 329
                 + V+ A +       +LL  +YG +     +  LE     V+ + ++   FD  
Sbjct: 287 ------IFVAWAEYDSTR---YLLADDYGRLDLLTIRTNLEPTGVVVTGMTVEPFEFDNS 337

Query: 330 PV----TASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFF 385
           P      +S+  L +G LF AS  G+  LYQ        +++  ++ L+++     P+  
Sbjct: 338 PAITSRASSLVYLGNGNLFVASHHGDSQLYQI-------NIDTKAAMLVQSFSNNAPILD 390

Query: 386 QPRGLKNLVRIEQVESLMPIMDM-------RIANLFEEEAPQIFTLCGRGPRSSLRILRP 438
                              IMDM       +  N+F     +I   CG     +LR +R 
Sbjct: 391 -----------------FSIMDMGNREGDTQSGNVFSSGQSRIVAGCGAYRDGTLRSIRS 433

Query: 439 GLAVSEMAV-SQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSD 494
           G+ + +  V  +L G    ++T+    ++  D  +V S    T +LS    G   E  S 
Sbjct: 434 GVGLEDRGVLDELEGT-RGLFTLHSYGSEMVDTLVVSSITE-TRILSFDFEGGIEEIYSF 491

Query: 495 SGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQV 552
            G    + +L  S +    L+Q+ P  +  +  +G   I++W  P  +TI +  +N    
Sbjct: 492 QGMSLDSETLLASNLPSGQLLQITPKSVVLLDPEGGTTISKWDVPDGKTITRASANSKWA 551

Query: 553 VIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACL--DIASVPEGRKRSRFLAVGSYD-- 608
           ++++ G  L+   +    Q L V   +++ D       I+ +   R       VG +   
Sbjct: 552 LLSVDGTSLVSLNL---LQNLAVNAQQINNDSTSQPDQISCIHAARDSPDLGVVGWWSSG 608

Query: 609 --NTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL---FLNAG 663
             + I + SL P     +   +  ++ P  +  +++           HP  +    L   
Sbjct: 609 QISLIDMASLKPLHGESMRQTEDSATVPRDVALVQL-----------HPPDISGPTLLVA 657

Query: 664 LQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV-GGRAAMLCLSSRPWLGYIHRG 722
           +++G +    V      +S  +S  LG  P +L  +    G + +   +    L Y   G
Sbjct: 658 MEDGNIVTFNVSTKGFSVSGRKSVTLGSNPARLHILPQEDGTSNVFVTTEHASLIYSSEG 717

Query: 723 RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRR 782
           R + +  + +   + A FSS    + VV      +R+  ++R   T +  ALP+  T RR
Sbjct: 718 RIIFSATTADDATFVAPFSSHAFPDSVVLSTDQHIRICHVDRERLT-HVKALPVNETVRR 776

Query: 783 FVLQPKKK 790
               P  K
Sbjct: 777 VAYSPGLK 784


>gi|408393339|gb|EKJ72604.1| hypothetical protein FPSE_07241 [Fusarium pseudograminearum CS3096]
          Length = 1161

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 178/848 (20%), Positives = 327/848 (38%), Gaps = 127/848 (14%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + + T I  A+  N    +  +++VA+   LE+ R    G +    +  I G I  
Sbjct: 3   YVAPIHRATSIRHALRANVIDPEIDDLIVAKANRLEIWRLTEEGLL-CQQTKLIHGTISM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ--ETFGKSGCRRIVPGQYLA 121
           L + R  GS+ D + +G+D  +   L +N +    + I +  E   +   R+        
Sbjct: 62  LQRLRPKGSETDLLFIGTDRLQYFNLIWNDATKQLETIERVIEDLSEPYMRQSQSQNKCL 121

Query: 122 VDPKGRAVMIGACEKQKLVYVL--NRDTAARLTISSPLEA----HKSHTIVYSICGIDCG 175
           VDP GR + +   E    V+ L   + +  +L +   +       K+ T  YS       
Sbjct: 122 VDPTGRFLAMHLWEGVLNVFKLPTRKGSTNKLEVLDQVRLTELFMKASTFTYSYT----- 176

Query: 176 FDNPIFAAIELDYSEADQDSTGQAA---SEAQKNLTFYELDLGLNHVSRKWS-EPVDNGA 231
            ++P  A   L  ++ DQ+ T       +   K  T  + D    H  R+   E  D  A
Sbjct: 177 -NHPTIAF--LYKTQMDQEETRLVIYRLTHDDKGNTVSKFD---PHKDRELDIEIPDPYA 230

Query: 232 NMLVTVP-------------GGGDGPSGVLVCAENFVIYKN-QGHPDVRAVI--PRRADL 275
           +ML+ VP             G      G++V  E  + Y + Q H  V A +  PR    
Sbjct: 231 SMLIPVPLDEEKRYHVRNNQGAKPHLGGLVVVGETLLTYYDGQTHRSVSAGLKDPR---- 286

Query: 276 PAERGVLIVSAATHRQKTLFFFLLQTEYGDI----FKVTLEHDNEHVSELKIK--YFDTI 329
                 + V+ A +       +LL  +YG +     +  LE     V+ + ++   FD  
Sbjct: 287 ------IFVAWAEYDSTR---YLLADDYGRLDLLTIRTNLEPTGVVVTGMTLEPFEFDKS 337

Query: 330 PV----TASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFF 385
           P      +S+  L  G LF AS  G+  LYQ        +++  +  L+++     P+  
Sbjct: 338 PAITSRASSLVYLGDGNLFVASHHGDSQLYQI-------NIDTKAVMLVQSFSNNAPILD 390

Query: 386 QPRGLKNLVRIEQVESLMPIMDM-------RIANLFEEEAPQIFTLCGRGPRSSLRILRP 438
                              IMDM       +  N+F     +I   CG     +LR +R 
Sbjct: 391 -----------------FSIMDMGNREGDTQSGNVFSSGQSRIVAGCGAYRDGTLRSIRS 433

Query: 439 GLAVSEMAV-SQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNA-TLVLSIGETVEEV-SDS 495
           G+ + +  V  +L G    ++T+    +   D  +V S      L   +   +EE+ S  
Sbjct: 434 GVGLEDRGVLDELEGT-RGLFTLHSYGSKMVDTLVVSSITETRILSFDLEGGIEEIYSFQ 492

Query: 496 GFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVV 553
           G    + +L  S +    L+Q+ P  +  +  +G   I++W  P  +TI +  +N    +
Sbjct: 493 GMSLDSETLLASNLPSGQLLQITPKSVVLLDPEGGTTISKWDVPDGKTITRASANSKWAL 552

Query: 554 IALSGGELIYFEVDMTGQLLEVEKHEMSGD-------VACLDIASVPEGRKRSRFLAVGS 606
           +++ G  L+   +    Q L V   +++ D       ++C+  A  P     + + + G 
Sbjct: 553 LSVDGTSLVSLNL---LQNLAVNAQQINNDSTSQPDQISCIHAARDPPDLGVAGWWSSGQ 609

Query: 607 YDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL---FLNAG 663
             + I + SL P     +   +  ++ P  +  +++           HP ++    L   
Sbjct: 610 I-SLIDMASLKPLHGESMRQTEDSATVPRDVALVQL-----------HPPNISGPTLLVA 657

Query: 664 LQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV-GGRAAMLCLSSRPWLGYIHRG 722
           +++G +    V      +S  +S  LG  P +L  +    G + +   +    L Y   G
Sbjct: 658 MEDGNVVTFNVSTKGFSVSGRKSVTLGSNPARLHILPQEDGTSNVFVTTEHASLIYSSEG 717

Query: 723 RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRR 782
           R + +  + +   + A FSS    + VV      +R+  ++R   T +  ALP+  T RR
Sbjct: 718 RIIFSATTADDATFVAPFSSHAFPDSVVLSTDQHIRICHVDRERLT-HVKALPVNETVRR 776

Query: 783 FVLQPKKK 790
               P  K
Sbjct: 777 VAYSPGLK 784


>gi|296411833|ref|XP_002835634.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629420|emb|CAZ79791.1| unnamed protein product [Tuber melanosporum]
          Length = 1053

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 199/434 (45%), Gaps = 44/434 (10%)

Query: 389 GLKNLVRIEQV-ESLMPIMDMRIANL--------FEEEAP---QIFTLCGRGPRSSLRIL 436
           G+K +VR++QV  ++ PI+D R+ +L          + +P   +  +  G   +  LR +
Sbjct: 349 GIKPMVRVQQVLRNIGPIVDFRVMDLDYSRSDEVMRQYSPGHIRFLSASGGHTQGHLRTI 408

Query: 437 RPGLAVSEMA-VSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEV 492
           R G+ + ++  + ++ G+   +W+++      FD  +VVSF   T +      GE  E  
Sbjct: 409 RSGVGLYDLGFLGEMSGI-RGLWSLRSIPGSSFDDVLVVSFIEETRIFKFDNSGEIEELY 467

Query: 493 SDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIR--HIREDGRINEWRTPGKRTIVKVGSNR 549
              GF L+    LA S++G    +QV  + ++   +R +  I E   P K   + + S  
Sbjct: 468 EFMGFALNQRTILAHSVVG-GRFLQVTATAVKLVDVRSNTLIAE-SYPDKSLTITIASAN 525

Query: 550 LQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYD- 608
             ++I   G  L+   +++   L E  +     +++CL++ S P     S   AVG +  
Sbjct: 526 QDLLIYAMGPTLVL--LNLARDLEEHIRTTFENEISCLNMPSSP-----STICAVGFWTV 578

Query: 609 NTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQN 666
           + + ILS+     +  +ILS +  ++ P SLLF  +      E+G   P +L +  G  +
Sbjct: 579 SLVLILSVQSFSILSQEILSQEDSAATPRSLLFARLL-----ENG---PPTLLVALG--D 628

Query: 667 GVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFL 725
           G +F   ++  T  LS+ +   LG +P +  S+  G G   +      P + Y   GR +
Sbjct: 629 GSMFTFALNETTCGLSERKHIILGAQPIRFQSIPGGNGGVTVFATCDHPSVIYGSDGRIV 688

Query: 726 LTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVL 785
              ++ +   Y  SF+S    + VV  + + L++  ++ +  T +  +LP+    RR   
Sbjct: 689 YASVTADKPTYVTSFNSPSFPDAVVIASEDDLKLSVVDPV-RTMHVQSLPVGDVVRRIAY 747

Query: 786 QPKKKLMVIIETDQ 799
             +K ++ I+   +
Sbjct: 748 SKEKNIIAIVTVSK 761


>gi|302894051|ref|XP_003045906.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726833|gb|EEU40193.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1162

 Score = 83.2 bits (204), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 174/847 (20%), Positives = 320/847 (37%), Gaps = 124/847 (14%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + + T I  AI  N    +  ++VVA+   LE+ R    G +E L +  I G I  
Sbjct: 3   YVAPIHRATSIRHAIRANVLDPEIDDLVVAKANRLEIWRLSEEG-MECLQTKLIHGTISM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ--ETFGKSGCRRIVPGQYLA 121
           L + R  GS+ D + +G+D  +   L +NP     D I +  E   +   R         
Sbjct: 62  LQRLRPKGSETDLLFIGTDRLQYFNLAWNPEMKQLDTIERVIEDLSEPYMRHSQSQNKCL 121

Query: 122 VDPKGRAVMIGACEKQKLVYVL--NRDTAARLTISSPLEA----HKSHTIVYSICGIDCG 175
           VDP  R + +   E    V+ L   + +  +L I   +       K+ T ++S  G    
Sbjct: 122 VDPTARFLAMHLWEGVLNVFRLPTRKGSTNKLEILDQVRLTELFMKASTFIHSRTG---- 177

Query: 176 FDNPIFAAIELDYSEADQDSTGQAA---SEAQKNLTFYELDLGLNHVSRKWSEPV-DNGA 231
             +P  A   L  S+ +Q+    A    +   K     + D    H  R+    + D  A
Sbjct: 178 --HPTIAF--LYKSQMEQEEARLAIYRLTHDDKGGVVSKFD---PHKDRELDVVIPDPYA 230

Query: 232 NMLVTVP-------------GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE 278
           +ML+ VP             G      G+L+  E  + Y +         +  R+   + 
Sbjct: 231 SMLIPVPLDEEKRYHVRNTEGAKAHLGGLLIVGETLLTYYDG--------LTHRSVSSSL 282

Query: 279 RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPV------- 331
           +   I  A      T +F  L  +YG +  +T+E  N   + + +     +P+       
Sbjct: 283 KDPRIFVAWAEYDGTHYF--LADDYGRLDMLTIE-TNVEATGVVVTGMTLVPMKLGESPA 339

Query: 332 ----TASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQP 387
                +S+  + +  LF AS  G+  LYQ        D E ++  L+++     P+    
Sbjct: 340 LTSRASSLVYMGNNTLFVASHHGDSQLYQI-------DPETNAMLLIKSLSNNAPILD-- 390

Query: 388 RGLKNLVRIEQVESLMPIMDM-------RIANLFEEEAPQIFTLCGRGPRSSLRILRPGL 440
                            IMDM       +  N F     +I   CG     SLR +R G+
Sbjct: 391 ---------------FSIMDMGNREGDAQAGNAFSSGQSRIVAGCGAYQDGSLRSIRSGV 435

Query: 441 AVSEMAV-SQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGET--VEEV-SDSG 496
            + E  +  +L G    ++T++   +D  D  +V S    T +LS      +EE+ S  G
Sbjct: 436 GLEERGILDELDGT-RGLFTLRSYNSDLVDTLVVSSITE-TRILSFDTDGGIEEIYSFQG 493

Query: 497 FLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVI 554
               T +L  S + +  L+Q+ P  +  +  +    ++ W  P  ++I +  +N    ++
Sbjct: 494 MEQDTETLLASNLPNGQLLQITPKSVVLLDPESGVAVSRWDVPTGKSITRASANTKWALL 553

Query: 555 ALSGGELIYF----EVDMTGQLLEVEKHEMSGD-VACLDIASVPEGRKRSRFLAVGSYDN 609
           ++ G  L+       + +  Q  + E      D ++C+  A  P       + + G   +
Sbjct: 554 SVDGTSLVSLNLLQNLAVNVQQTQAEPGSQQPDQISCIHAARDPPDIGVVGWWSSGRI-S 612

Query: 610 TIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL---FLNAGLQN 666
            I + +  P     +      ++ P  +  +++           HP  +    L   +++
Sbjct: 613 LIDMATFQPLHGESMRQTDDSATVPRDIALVQL-----------HPPEISGPTLLVAMED 661

Query: 667 GVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV-GGRAAMLCLSSRPWLGYIHRGRFL 725
           G +    V +    +S  +S  LG  P +L  +    G +++   +    L Y   GR +
Sbjct: 662 GTVVTFNVSIKGFAVSGRKSVTLGSNPARLHVLPQDDGTSSVFVTTEHASLIYSSEGRII 721

Query: 726 LTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI--ERLGETFNETALPLRYTPRRF 783
            +  + +   + A F S    + +V    + +R+  +  ERL       ALP+  T RR 
Sbjct: 722 FSATTADDATFVAPFDSHAFPDSIVLSTDSHIRICHVDKERLTHV---KALPVHETVRRV 778

Query: 784 VLQPKKK 790
              P  K
Sbjct: 779 AYSPGLK 785


>gi|452003044|gb|EMD95501.1| hypothetical protein COCHEDRAFT_1165632 [Cochliobolus
           heterostrophus C5]
          Length = 1116

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 183/819 (22%), Positives = 314/819 (38%), Gaps = 107/819 (13%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +P+ +  A+  NF   +   +VVA+   LE    E  G I    S  I+G +  
Sbjct: 3   YIAPIHRPSSVRHALKLNFLAPEDDCLVVAKSNRLEFYTHEADGLI-LRHSKAIYGKVTM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGK---SGCRRIVPGQYL 120
           L + R   S  D++ +G+D      L +N  K       +++F     +  R    G+  
Sbjct: 62  LQKLRPALSPTDHLFIGTDRFMYFTLSWNAEKKQLQT--EKSFASVADNAARESQTGERC 119

Query: 121 AVDPKGRAVMIGACEKQKLVYVL-----NRDTAARLT-ISSPLEAHKSHTIVYSICGI-- 172
            +DP GR + I   E    V  L      R   A +  +  P         V S   +  
Sbjct: 120 HIDPTGRFMTIEVYEGILTVIPLVQRGKKRKQEADIAHLGDPQPVRLPEMFVRSSAFLRP 179

Query: 173 DCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDN--- 229
               D P  A +  D             + AQ  L   EL    + V  +  E   +   
Sbjct: 180 RSTDDKPKMALLYED-------------THAQVKLRLRELTYVGDEVDLQEGEACKSELE 226

Query: 230 -GANMLVTVPGGGDGPS-GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAA 287
            G++ L+ +    + PS G++V  E  + Y +    D++         P +   + V  A
Sbjct: 227 LGSSHLIPL----EEPSHGLVVIGETSIGYFDDESGDLQTE-------PLDEATIFV--A 273

Query: 288 THRQKTLFFFLLQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIPVTASMCVLKSGYLFAA 346
             R     F +L  +YG ++   L  + +  V   K+         +++  L +GY+F  
Sbjct: 274 WERIDAQRF-VLADDYGRLYMFMLVLNAQGRVQSWKLDVIGQTSRASTLVYLDAGYVFVG 332

Query: 347 SEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIM 406
           S  G+  + +         +   S  +++T     P+                     IM
Sbjct: 333 SHQGDSQVIR---------IAEKSMEIVQTFSNIAPILD-----------------FTIM 366

Query: 407 DM------RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
           DM         N +     +I T  G     SLR +R G+ + ++ V       S ++ +
Sbjct: 367 DMGNRSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEMEHISELFCL 426

Query: 461 KKNVNDEFDAYIVVSFNNATLVL---SIGETVEEVSD--SGFLDTTPSLAVSLIGDDSLM 515
           +   + ++   ++VSF   + V    S GE VEEV +  S  LD T +LA + I    ++
Sbjct: 427 RSAPSAQYTDTLLVSFVGESRVFRFDSQGE-VEEVDEFVSLALDET-TLAAANIPQGRIV 484

Query: 516 QVHPSGIRHIREDGRI--NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLL 573
           QV     R    DG +  +EW     +TI     N   V+++L G  ++   +    Q++
Sbjct: 485 QVTNGRARICDLDGGMMTSEWVPADGKTITAASVNATHVLVSLGGVTIVSLSMADGLQVV 544

Query: 574 EVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNT-IRILSLDPDDCMQILSVQSVSS 632
           + +       VAC+   +VP G   + F  VG ++N+ + I SLD  + ++ + + S  S
Sbjct: 545 KEKTFGAESQVACV---TVPSGTSSTCF--VGFWNNSQLAICSLDTLEAVKTVQI-SDDS 598

Query: 633 PPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLR 692
            P SLL  ++          D P SLF+   L +G +     D    +LS  +S  LG R
Sbjct: 599 VPRSLLLTQI--------FPDQPPSLFV--ALADGNVVTYTFDPSNHELSGRKSIVLGTR 648

Query: 693 PPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVS 751
                ++  G G   +      P L Y   GR + + ++ E       F S+     V  
Sbjct: 649 EATFRALPRGDGLFNVFATCEHPSLIYASEGRLVYSAVTAEKATTVCPFDSEAYPSSVAI 708

Query: 752 VAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
                LR+  ++    T  +T L +  T RR    P  K
Sbjct: 709 ATSQDLRIALVDTERTTHVQT-LKVDETVRRIAYSPSLK 746


>gi|194377326|dbj|BAG57611.1| unnamed protein product [Homo sapiens]
          Length = 451

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 155/362 (42%), Gaps = 43/362 (11%)

Query: 859  VSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGL--QFWPKRN 916
            V  + ++D  +       +   NE A S+ +     K+  T   VGTA     +  PK+ 
Sbjct: 99   VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKL-GKDPNTYFIVGTAMVYPEEAEPKQ- 156

Query: 917  IVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR 976
               G I ++++  +GK L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR
Sbjct: 157  ---GRIVVFQY-SDGK-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR 211

Query: 977  KCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI 1036
               N       + + T  D I VGD+  S     Y+  E      A D  P W++A   +
Sbjct: 212  TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL 271

Query: 1037 DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGD 1096
            D D   GA+   N++  +  +D +   +E+                   ++E+  FH+G+
Sbjct: 272  DDDNFLGAENAFNLFVCQ--KDSAATTDEE----------------RQHLQEVGLFHLGE 313

Query: 1097 VVTSLQKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ 1147
             V      SLV         P  G SV++GTV G +G + +  S    +    ++  + +
Sbjct: 314  FVNVFCHGSLVMQNLGETSTPTQG-SVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNK 371

Query: 1148 EHPPLCGRDHMAYRSAYF-----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEIL 1202
                +   +H  +RS +      P    IDGDL E F  +S    +++   L    G  +
Sbjct: 372  VIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGM 431

Query: 1203 KK 1204
            K+
Sbjct: 432  KR 433


>gi|393212467|gb|EJC97967.1| hypothetical protein FOMMEDRAFT_162310 [Fomitiporia mediterranea
            MF3/22]
          Length = 1161

 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 222/1123 (19%), Positives = 423/1123 (37%), Gaps = 197/1123 (17%)

Query: 7    TLQQPTGIIAAINGNFSGTKTPE-IVVARGKVLELLRP-ENSGRIETLVSTEIFGAIRSL 64
            T  QPT ++ +I    +  +  E +VVA+  +LE+     ++ R++ ++  EI+G I SL
Sbjct: 6    TFHQPTSVVGSIKTTLTEDEDTEYLVVAKSSILEVFAILPDALRLQCVL--EIWGRITSL 63

Query: 65   AQFRLTG-SQKDYIVVGSD--SGRIVILEY-------NPSKNVFDKIHQETFGKSGCRRI 114
                    + + +++V +D    ++ +LEY        PS      +          R  
Sbjct: 64   QAVPTDDENSQHHLLVLTDHPDPKLFLLEYVQSNAGSGPSLKTLKTVSLHE------RNA 117

Query: 115  VPGQYLA---VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICG 171
             P +Y++   VD KG+  +  AC     + VL  +      I+S  +       + S+C 
Sbjct: 118  RPTEYVSKCLVDHKGKVAV--ACSYTGKLRVLELEKGL---INSEFDTAVRELNIVSLCF 172

Query: 172  IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVS--RKWSEPVDN 229
            +     N    A+ + Y +       Q  S    +L+  +L+L  +  S   ++  P D 
Sbjct: 173  LRT--TNARATALAILYKDY-----MQKLSVTSHDLSLADLELSPSPSSFLPEFHVP-DE 224

Query: 230  GANMLVTVP----GGGDGPSGVLVCAENFVIYKN-----------QGHPDVRAVIPR-RA 273
             +N+L+ VP       +   GVLV   + + + +                  + IP+   
Sbjct: 225  DSNLLIPVPPQIKSSWNVNGGVLVLGGSTIAFYSIDRKQKKKNSSSQSKSSTSKIPQAEV 284

Query: 274  DLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTA 333
            + P       ++A     +    +LL   +G   ++ L   N   + L I     +    
Sbjct: 285  NWP----YFDITAWAQIDEDGLRYLLGDSFG---RLALLAINPQYAYLDIVLLGEVSPPT 337

Query: 334  SMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNL 393
            S+  L S Y++  S FG+  L +  +        +S+ + +E  + F+            
Sbjct: 338  SLTPLASQYIYVGSHFGDSQLIRVTS------ERSSNGSYLEISDTFK------------ 379

Query: 394  VRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
                   ++ PIMD    +  +   P I T  G     SLR++R G   +E A  +    
Sbjct: 380  -------NIAPIMDAVFEDTDDSGQPTIITCSGGESTGSLRVIRNGANFNEDARIEGIAN 432

Query: 454  PSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS---GFLDTTPSLAVSLIG 510
             + +W +++  +D F  Y++V+ +  T +L +  + +E + S    F D T      + G
Sbjct: 433  ITGMWPIRRQYDDTFHHYMLVTTDTNTHLLELPNSQQETAVSRSNDFSDLTIDSRTLVAG 492

Query: 511  DDSLMQVHPSG-------------------IRHIREDGRINEWRTPGKRTIVKVGSNRLQ 551
            +     +  SG                   + + R   R ++W       IV    +  Q
Sbjct: 493  NMLTRLMSESGKSEYVSSSYVVQVSRDSVILLNTRTGLREDQWSPGPGNKIVLADISPSQ 552

Query: 552  VVIALSGGELIYFEVDMTGQLLEVEKHEM------SGDVACLDIASVPEGRKRSRFLAVG 605
            + +A+SGG ++   +    ++ E  + +       S +++ L I+ +  G   S F+A+G
Sbjct: 553  ICVAISGGTVVLLNL-FADKINEQSRKQFYSPDGSSSEISALSISPMKRGANFSSFVALG 611

Query: 606  SYDN----TIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLN 661
             + +     +R+ + +  D + ++    +   P SLL  +       E+   H    +L 
Sbjct: 612  FWSSHEVKVLRLPTFEQIDAVPVV----MPHLPRSLLLCDFSE----EESKPH---RYLM 660

Query: 662  AGLQNGVLFRTVVDMV---TGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGY 718
             GL NG    TVV M     G L + +   LG  P  L    V  + A+    +R  L Y
Sbjct: 661  VGLANG----TVVSMPFAEKGVLGEKKFFGLGGAPVSLSRCEVNDKPAVFASGARSALFY 716

Query: 719  IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRY 778
              +     +P+  + + +A++  S+     +     + L V  +  L +    T    + 
Sbjct: 717  RSKDTLSHSPVLIKDVTFASAIHSESFTSSMALSTLDGLVVGRVLELDKLHIRTVFMGKE 776

Query: 779  TPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDEN 838
             P +       KL+ +     G L  +      +  F+ A +                  
Sbjct: 777  NPTKLAYHSAAKLLGV-----GCLKLD------RSTFKGAPVA----------------- 808

Query: 839  KYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHG 898
                                 S  +++D     TT  + L+ NE   ++  V+  D   G
Sbjct: 809  --------------------ASSFKLVDTVDFRTTHEISLEPNEEITAVALVSL-DCGIG 847

Query: 899  --TLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQG 954
              T  AVG+      +  P R  +   + I    +  ++  +L  T+V+G   AL   QG
Sbjct: 848  WDTFFAVGSVYFDETEREPSRGRI---LIISTGSKRNQTPHILASTEVKGAVNALTCIQG 904

Query: 955  RLLAGIGPVLRLYDL--GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYR 1012
            +L+  I   + ++ L  G   +L    +      +++     D I +GD   S    K  
Sbjct: 905  KLVVAINTSVDVFRLKHGDNTVLTAVTSWNHNYLVITAVVMDDLIVIGDAVSSLAVLKLE 964

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
             D  +L  FA D  P W       D  T+ GA+   N++  RL
Sbjct: 965  DD--KLTTFARDYSPLWPLCIGAFDNKTVIGANNDNNLFSYRL 1005


>gi|170090007|ref|XP_001876226.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649486|gb|EDR13728.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1275

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 180/872 (20%), Positives = 319/872 (36%), Gaps = 174/872 (19%)

Query: 396  IEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPS 455
            +   ++L PI+D  + +        I T  G     S+ I+R G    E  +  +PG+  
Sbjct: 467  LSSYKNLAPILDAILVDTDGSGQQHIVTCSGARSTGSINIVRNGADFQE--IGHVPGLTG 524

Query: 456  --AVWTVKKNVNDEFDAYIVVSFNNATLVLSIGET--------VEEVSDSGFLDTTPSLA 505
               VW+V+  + D  D YI+VS N +T +  I ++        V+  +    + T  +LA
Sbjct: 525  VVGVWSVRTMLEDTTDRYILVSTNRSTHLFEIDDSGSTSTITPVDSTTIRSLVTTEATLA 584

Query: 506  V------SLIGDDSLMQVHPSGIRHIREDGRINEWRTP------------------GKRT 541
                   S +G  S+ +  P  ++ +    R+ +  T                   G+R 
Sbjct: 585  FSNLARRSSVGGSSVYKNSPLAVQVVASGARLLKSNTAFGGYELVAQYSMLSSVPYGQRP 644

Query: 542  --IVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV-------EKHEMSGDVACLDIASV 592
              +V   +N  Q+V+A SGG+L  + +      LE+       E  E+S  V+C  + + 
Sbjct: 645  LEVVAASANASQLVMAASGGKLTLWRLGENVDALEMIAGCQRKEGPEISA-VSCAPLNTT 703

Query: 593  PEGRKRSRFLAVGSY--DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGED 650
                KR+    + SY   NTI IL +       +    ++ +   S+L     +    + 
Sbjct: 704  ----KRTSPTIIVSYWQSNTIEILQVSLKGLESVYKSPTLPALVRSVLLYNFGSDTNPKG 759

Query: 651  GADHPASLFLNAGLQNGVL--FRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
               HP   +L AGL NG +  FR        QL+D +   LG  P  L    V GR A+ 
Sbjct: 760  TDHHP---YLLAGLANGTVASFR----WKDKQLTDKKIIPLGHAPVNLMPCQVEGRHAVF 812

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
               +R  +      R + +P+  + +  AA  ++      ++      L +  ++ LG+ 
Sbjct: 813  AAGNRATVLSFENKRLVHSPIMLKDISSAARLNTPTFASSLILSTPTGLFIGRVQGLGK- 871

Query: 769  FNETALPLRY-TPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGN 827
             +  ++P  +  PR+   +P  K   +      A T  E                     
Sbjct: 872  LHIRSIPFGFDNPRKIAHEPSIKAFGV------AFTTME--------------------- 904

Query: 828  MDQMENGDDENKYDPLSDEQYGYPKAESDKWVS--CIRVLDPRSANTTCLLELQDNEAAF 885
                                   P   +D  +S    ++LD  S    C      +E   
Sbjct: 905  -----------------------PNRVNDPEISRSSFKLLDDTSFANLCQFNCDPDEETT 941

Query: 886  SICTVNFHDKEHGT---LLAVGT--AKGLQFWPKRNIVAGYIHIYRFVEEGKS---LELL 937
            ++  V+F  K  G       VGT   K  +  P     AG + I+       S   L L+
Sbjct: 942  AV--VSFSQKIAGKPMPFFCVGTYVYKAGEVEPS----AGRLMIFTATTSTSSNLALSLM 995

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR-----KCENKLFPNTIVSINT 992
              T+V G   AL   Q +++A +   + L+ L            K         + S+ +
Sbjct: 996  ASTKVPGCVYALTVVQNQIVAAVNSSVMLFRLESSSDSLSPSLIKVSEWHHNYLVTSLGS 1055

Query: 993  YRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
            Y DR+ VGD   S    +    +++L   A D  P W      +D   + GA+   N++ 
Sbjct: 1056 YADRVVVGDQPSSISLLQV--TQSKLISQARDYGPLWPVCVEALDERHIIGANDSLNLFT 1113

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
              L + +          G+ + E+   +G          +HV D+VT   + SL      
Sbjct: 1114 FSLEKAM----------GRSRLER---DGC---------YHVADLVTKFLRGSLSSSDAS 1151

Query: 1113 SV-------IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS--- 1162
            +        ++ T  G +G ++     +     ++++ ++      + G  H  YR+   
Sbjct: 1152 TTSPLTSEAMFFTSSGRIGVVVDVKDEELSLQLTNMQRNLANVIQGVGGSSHSKYRAPKT 1211

Query: 1163 ------AYFPVKDVIDGDLCEQFPTLSLDLQR 1188
                  A       +DGD  EQF T  L  Q+
Sbjct: 1212 TRGTSDADSGAIGFLDGDFLEQFLTHVLSPQQ 1243


>gi|367044684|ref|XP_003652722.1| hypothetical protein THITE_2114471 [Thielavia terrestris NRRL 8126]
 gi|346999984|gb|AEO66386.1| hypothetical protein THITE_2114471 [Thielavia terrestris NRRL 8126]
          Length = 1187

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 167/835 (20%), Positives = 313/835 (37%), Gaps = 107/835 (12%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +P+    A+       +   +V+ R   LE+ R  + G +  + S  + G I  
Sbjct: 3   YIAPIHRPSSARHALYSQLLSDEEESLVLRRANRLEIWRLRD-GLLNLVHSKVVNGTIAI 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ---YL 120
           L + R   ++ D + VG+D      L +NP  +  D I+   F   G R +   Q     
Sbjct: 62  LQKLRPKDARTDLLFVGTDRFEYFTLAWNPETSQLDTIN--PFNDPGERHMRDSQSQDRC 119

Query: 121 AVDPKGRAVMIGACEKQKLVYVL--NRDTAARLTISSPLEAH----KSHTIVYSICGIDC 174
            VDP GR + +   E    +  L   ++TA  L     +       K+ T +Y+  G   
Sbjct: 120 LVDPSGRFLAMHLWEGVLTILRLGNRKNTATVLDWMGQVRLSELFIKASTFLYTETG--- 176

Query: 175 GFDNPIFAAIELDYSEADQDSTGQAAS----EAQKNLTFYELDLGLNHVSRKWSEPVDNG 230
                    I L Y      S  Q A+       +N      D   N      +E  D  
Sbjct: 177 ------HPKIALLYQSRADSSDAQLATYRLTSDDRNTELSRFDP--NRDREIDAEIHDPS 228

Query: 231 ANMLV---------------TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL 275
           A+ML+                V        G++V  E  ++Y ++       V     + 
Sbjct: 229 ASMLIPVRKVEEQVKRHNVRNVESAKAHIGGLIVVGETRLLYIDE-------VTKTTVES 281

Query: 276 PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASM 335
                 + V+ A +  K  F   L  +YG++  +TLE ++  V+ + +         +++
Sbjct: 282 ALTEASIFVAWAEYDVKHYF---LADDYGNLHLLTLETEDVVVTGMIVNRIGKTSRASNL 338

Query: 336 CVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVR 395
             L    LF AS +G+  L++                 +E ++  Q V            
Sbjct: 339 VYLGDNLLFVASHYGDSQLFRLD---------------LENDDARQLVQL---------- 373

Query: 396 IEQVESLMPIMDMRI------------ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVS 443
           ++ + ++ PI+D  I            AN +     +I T  G     +LR +R G+ + 
Sbjct: 374 VQTLPNIGPILDFEIMDLGNRGDEGQLANEYSSGQARIVTCSGVHKDGTLRSVRSGVGLE 433

Query: 444 EMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL---SIGETVEEVSDSGFLDT 500
           ++ +         ++ +    + + D  + VSF   T V    S G+  E  S SG    
Sbjct: 434 DVGILADLEHCRGLFPLSSYGSPKTDT-LAVSFLTETRVFKFDSHGDVEEVESFSGMTFD 492

Query: 501 TPSLAVSLIGDDSLMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIALSG 558
             +L    +    L+QV P+    +  +    I  W   G+RTI+   +N   +++++ G
Sbjct: 493 QQTLLAMNLPKGQLLQVTPAAASLLDAESGVTIASWAPEGERTIISASANPRWLLLSVGG 552

Query: 559 GELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDP 618
            EL+   +    Q ++ +       VAC+ +A   +      F   G+  + I + +L+P
Sbjct: 553 TELVSLSIANDFQTVQAKDMNQQDQVACIHVAPGLDDVGVVGFWTSGTV-SIIDLHTLEP 611

Query: 619 DDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVT 678
                + + +  +S P  L  +++         A  P +LF+     N V F    D+  
Sbjct: 612 IHGESLRTSKDDASIPRDLALVQMLPP-----SASGP-TLFVAMQDGNVVTFNVSKDLA- 664

Query: 679 GQLSDSRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYA 737
             LS  +   LG+R  +   +    G  ++   +  P L Y   GR + + ++ E   Y 
Sbjct: 665 --LSGRKRVILGMRQARFHLLPQPDGIFSIFATTEHPSLIYGSEGRIVYSAVTAEEATYI 722

Query: 738 ASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLM 792
             F ++   + +V      +R+  I+R   T +   L +    RR    P++K+ 
Sbjct: 723 CPFDTEAFPDCIVLATDAQIRISQIDRERRT-HVKPLQMGEMVRRIAYSPREKVF 776


>gi|402595041|gb|EJW88967.1| hypothetical protein WUBG_00126 [Wuchereria bancrofti]
          Length = 621

 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 138/639 (21%), Positives = 249/639 (38%), Gaps = 113/639 (17%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y +T  +PT +  A+ G+F       +V+A+   +EL      G ++      +FG I +
Sbjct: 5   YIVTAYKPTVVTHALVGSFIVPTELNLVLAKTNRVELFLVTPEG-LKPHRECPVFGRIAT 63

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVD 123
           +  FR  G   D +++ +    + I+ + P+  +  +       + G R    G    V 
Sbjct: 64  IKLFRAPGEDVDSLLILTAKYHLAIIRWTPTSELRTRASGHIVDRVG-RPSETGMIATVH 122

Query: 124 PKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF----DNP 179
             G            +V+ L       +  +   +    +     +  +D  F    D P
Sbjct: 123 SSGL-----------MVFRLYDGLLKIVQWNEGKDLRGFNVRCDDLYIVDITFMSDPDRP 171

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVP 238
             A I        QD  G+       N+   EL       S  W  + ++  AN++++VP
Sbjct: 172 TLAYIY-------QDDNGRHIKVVTLNIDDKELS------SPLWKHDNLEGEANIVISVP 218

Query: 239 GGGDGPSGVLVCAENFVIYKNQG-----------------HPDVRAVIPRRADLPAERGV 281
              +   G L+   + + Y   G                 HP+  A + R      +R +
Sbjct: 219 ---EPVGGCLIAGPDAISYHKGGDDALRYAGVPGSRLHNTHPNCYAPVDR----DGQRYL 271

Query: 282 LIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-------VSELKIKYFDTIPVTAS 334
           L   A       L+  LL+          L  D E        V ++K++      +   
Sbjct: 272 LADLAGN-----LYMLLLE----------LGKDQEQDENSAVIVRDMKVESLGETCIAEC 316

Query: 335 MCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR--GLKN 392
           MC L +G  F  S FG+  L +                             +PR  G   
Sbjct: 317 MCYLDNGVCFIGSRFGDSQLIRLST--------------------------EPRADGTGY 350

Query: 393 LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPG 452
           +  ++   +L PI DM +     ++  QI T  G     ++RI+R G+ + E+A  +L G
Sbjct: 351 ISLLDSYTNLAPIRDMTVMRCNGQQ--QILTCSGAYKDGTIRIIRNGIGIEELASVELKG 408

Query: 453 VPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGF-LDTTPSLAVSLIG 510
           + + ++T++    DEFD Y+++SF++ T VL I GE +E+   +GF +D     A  L  
Sbjct: 409 IKN-MFTLRTR-GDEFDDYLILSFDSETHVLFINGEELEDTEITGFAVDGATLWAGCLFH 466

Query: 511 DDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG 570
             +++QV    +  I  D  I  W++P   T++         ++   G  LIY E +  G
Sbjct: 467 SKTILQVTHGEVILIDGD-NIQVWKSPKWITLLNYDERSTGQLVVACGALLIYLEANSAG 525

Query: 571 QLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDN 609
               + + E   +++C+DI  + +G  RS   AVG + +
Sbjct: 526 -FKVITQIECEFEISCIDITPIGKGTLRSEICAVGYWTD 563


>gi|440639387|gb|ELR09306.1| hypothetical protein GMDG_03874 [Geomyces destructans 20631-21]
          Length = 1138

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 169/830 (20%), Positives = 321/830 (38%), Gaps = 105/830 (12%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y + + +P+ +  A++ N     +  +VVA+   LE+     +G ++   +  +   I  
Sbjct: 3   YVVPIHRPSSVRHALSLNLLDPDSTCLVVAKSNRLEIWTSTPTG-LQLAHTRTLHARITM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET-FGKSGCRRIVPGQYLAV 122
           LA  R   S   ++ VG+       L ++ +    + +H      +   R    G+  AV
Sbjct: 62  LAAIRPPTSCTAHLFVGTTRAHYFTLAWDAATRRLETVHAFVDASEKHMRDAAGGERCAV 121

Query: 123 DPKGRAVMIGACEK-QKLVYVLN--RDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179
           DP GR + +   E     V V+   +  AA   +  P +   +   V +   +     +P
Sbjct: 122 DPSGRQLCLSLFEGVLSFVKVMKPRKVAAAGSYLDDPEQIRITELFVRATVFLHTESTSP 181

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLN-HVSRKWSEPVDNGANMLVTVP 238
             A +  D     +D  G A          Y    G +   +R+    V+ GA+ L+ VP
Sbjct: 182 KVALLYQD----GRDRVGLATYRVTDGRGQYG---GFDPRKAREDELGVEVGASHLIPVP 234

Query: 239 GGGDGPS----------------GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVL 282
            G +G                  GV+V  E  ++Y +    + +A +    D   E  + 
Sbjct: 235 KG-EGVQRRYVVRNNASLKAQLGGVIVVGETRMLYLDD---ESKATVEHVLD---EASIF 287

Query: 283 IVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGY 342
           +   A    +    +LL  EYG +  +TL  D E V+ + IK F  I   ++M  L+   
Sbjct: 288 VAWTAYDGLR----YLLGDEYGWLHLLTLVVDAEVVTGMTIKKFVRISRPSTMVCLEDDL 343

Query: 343 LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
           LF  S  G+  + +        D++A  + +++T +   P+                   
Sbjct: 344 LFIGSHDGDSQVLKL-------DLDAKVAEVVQTLDNIAPIVD----------------- 379

Query: 403 MPIMDM------RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMA-VSQLPGVPS 455
             +MDM        AN F     +I T  G     SLR +R G+ + ++  + ++  +  
Sbjct: 380 FTVMDMGSRSEEARANEFSSGQARIVTGSGAFQEGSLRSVRSGVGLEDIGQLGEMDNI-K 438

Query: 456 AVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTT---PSLAVSLIGDD 512
            ++T++ N N EF   +V+SF+  T V       E      FL  +    +L  + + + 
Sbjct: 439 GLYTLQTN-NSEFHDTLVISFSTETRVFRFDSEGEVEEVEEFLGLSFEEHTLLAANVSNG 497

Query: 513 SLMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG 570
            ++Q+ PS    I  +    +  W+      I    +N    +++  G  LI   +D   
Sbjct: 498 RILQITPSKALLIDSESGVAVASWQPAPGEIITAASTNEDYALLSADGKSLISLNLD--N 555

Query: 571 QLLEVEKHEM--SGDVACLDI--ASVPEGRKRSRFLAVGSYDN-TIRILSLDPDDCMQ-- 623
            L E+ + +   +  VAC+D+     P G        VG + + ++ I+ L     +Q  
Sbjct: 556 DLSEIARQDFGDTDQVACVDVPNTETPIG-------LVGLWQSGSVSIIDLRTLHPIQGD 608

Query: 624 ILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSD 683
            L     ++ P S++  ++     G           L   + +GV+    V   T  L++
Sbjct: 609 TLRNDDTAAVPRSMVLAQILPKTFGPT---------LLVAMSDGVVHSYSVTPCTFALTN 659

Query: 684 SRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSS 742
            +S  LG +   L  +   GG   +        L Y   GR + + ++ E   +   F++
Sbjct: 660 RKSVVLGTQQANLRVLPRAGGLMNVFATCEHSSLIYSSEGRIIYSAVTAEDATFICPFNA 719

Query: 743 DQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLM 792
               + +V    + +++  I+    T   T LP+  T RR    P +K+ 
Sbjct: 720 AAYPDAIVVATASEIKISQIDTERRTHVRT-LPMGETVRRVTYSPSEKVF 768


>gi|290981010|ref|XP_002673224.1| CPSF A subunit [Naegleria gruberi]
 gi|284086806|gb|EFC40480.1| CPSF A subunit [Naegleria gruberi]
          Length = 1373

 Score = 80.9 bits (198), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 142/726 (19%), Positives = 278/726 (38%), Gaps = 129/726 (17%)

Query: 8   LQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIFGAIRSLA 65
           L  PT +   +   F+      +++ +  ++E  L++P N+  I  +   E+FG I S+ 
Sbjct: 8   LHPPTAVSFCLKARFTSANDENLIIVKNNIMEVYLIKP-NTSNIVLVKVFELFGVIDSII 66

Query: 66  QFRLTGSQKDYIVVG-SDSGRIVILEYNPSKNVFDKIH----QETFGKSGCRRIVPGQYL 120
              L G +K+ +++   D  ++ ++E++  ++    +     ++ F + G  R    Q +
Sbjct: 67  AVCLQGMKKEMLLINFEDEAKVSVVEFDEKRSDLKTLSLHYLEDDFLREGKARFFHNQPI 126

Query: 121 AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSP------------------------ 156
            +DP+ R   +  C+  KLV +  R +   +++S+                         
Sbjct: 127 ILDPQNRFATVIICD-SKLVILPFRQSGEDVSLSTEDNFLFALSGDQEEANENVGDQKKH 185

Query: 157 --LEAHKSHTIVYSICGI----DCGFDNPIFAAIELDYSEADQDSTGQAASEAQKN-LTF 209
              E  +   I  +  GI    D  F N       L   E +Q  +G+ A+++  + +T 
Sbjct: 186 HQPEVQRQVIIDLNDLGIKNVKDYCFLNGYNEPTILFLHENEQTWSGRLAAKSNTSTVTA 245

Query: 210 YELDLGLNHVSRKWSE-PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAV 268
              DL   +  + WS   + +  N L  +P   D   G LV   N +I+ NQ      + 
Sbjct: 246 VSFDLFRKYYPKIWSVGSLPHDCNKL--IPLQEDVAGGALVIGMNSIIHINQCATYGLSF 303

Query: 269 IPRRADLPAERGVLIVSAATHRQKTLFF------------FLLQTEYGDIFKVTLEHDNE 316
                D       L ++  T     LFF             L+  + G+++ + LE    
Sbjct: 304 ----NDFAVSNPNLSINFNTFDGPALFFDTVAYTFIARDKLLVSLKDGELYTMYLESGGS 359

Query: 317 HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ----AIGADPDVEASSST 372
            ++ + IK        + MC LK   +F  S+ G+  LY++Q       +  D +   S+
Sbjct: 360 RINNINIKKTSNTTPASCMCTLKGNLIFLGSKIGDSVLYEYQEKVEVETSSLDTDEEMSS 419

Query: 373 LMETEEGFQPV-----------FF-------QPRGLKNLVRIEQVESLMPIMDMRIANLF 414
           +    E F+P            FF       +P  +++  ++ + E+    ++++I ++F
Sbjct: 420 VFAAGENFEPEKKKRKLADDDDFFAALEKDEEPTVIESFSKVSKKETTK--VELKIKHVF 477

Query: 415 EEEAP--------------------------QIFTLCGRGPRSSLRILRPGLAVSEMAVS 448
               P                                G G    L +L   L     + +
Sbjct: 478 TNIGPISHLTAAVTSSFDMSGFKSKTNDNQLSAIACSGIGRHGCLTVLNRSLQPDIQSEA 537

Query: 449 QLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEV-SDSGFLDTTPSLAVS 507
            LP +   VWT+ +    E D Y+++S  + T V     T+ EV S S F+    +L + 
Sbjct: 538 TLPFLVKQVWTISQKT--EHDLYLILSLEDKTKVFESKATLAEVTSKSMFVTNETTLNIG 595

Query: 508 LIGDDSLMQVHPSGIRHI-REDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV 566
            I  +S++QV    +  I  E  +++  +   + +I+        V++    G L+    
Sbjct: 596 KIR-ESIVQVTRKSVMLIGSEPKQVHHSKKEIRSSIIL----DPYVLLHFYDGSLVLLTH 650

Query: 567 D---MTGQLLEVEKHEMSGDVACLDIASVPE------GRKRSRFLAVGSY-DNTIRILSL 616
           D   +T + L++E +       CL   + PE        K  ++L    + D    ILS+
Sbjct: 651 DNGRVTSKQLDIESNHGKITAVCL-YKTNPEFEFFGINEKEGKYLCCVYWTDGAFEILSV 709

Query: 617 DPDDCM 622
               C+
Sbjct: 710 PDMTCV 715


>gi|356559917|ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 95/418 (22%), Positives = 178/418 (42%), Gaps = 74/418 (17%)

Query: 827  NMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSA----NTTCLLELQDNE 882
            N  Q  N D++N++ P+ + +              +R+++P  +     T   + +Q +E
Sbjct: 1061 NESQNMNPDEQNRFYPIDEFE--------------VRIMEPEKSGGPWQTKATIPMQSSE 1106

Query: 883  AAFSI---CTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFVEEGKSLELL- 937
             A ++     VN   KE+ TLLA+GTA    +    ++ A G I ++   +   + + L 
Sbjct: 1107 NALTVRMVTLVNTTSKENETLLAIGTA----YVQGEDVAARGRILLFSLGKNTDNPQTLV 1162

Query: 938  ---HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
               +  +++G   AL   QG LL   GP + L+      L         P  +VS+N  +
Sbjct: 1163 SEVYSKELKGAISALASLQGHLLIASGPKIILHKWNGTELNGIAFFDAPPLHVVSLNIVK 1222

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            + I +GDI +S +F  ++    QL + A D                    D F   + + 
Sbjct: 1223 NFILIGDIHKSIYFLSWKEQGAQLSLLAKD----------------FGSLDCFATEFLID 1266

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGA--PNKMEEIVQFHVGDVVTSL---------QK 1103
                +S  + +D    +I +   K++ +    K+    +FHVG  VT            +
Sbjct: 1267 -GSTLSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDR 1325

Query: 1104 ASLVPGGGES----VIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMHMRQEHPPLCGRDH 1157
            A  VPG  ++    +++GT+ GS+G +      D++ F     L+  +    P + G + 
Sbjct: 1326 AGAVPGSDKTNRFALLFGTLDGSIGCIAPL---DEITFRRLQSLQRKLVDAVPHVAGLNP 1382

Query: 1158 MAYR------SAYFPVKD-VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
             A+R       A+ P  D ++D +L   +  L L+ Q +IA ++  T  +IL  L ++
Sbjct: 1383 RAFRLFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILSNLSDL 1440



 Score = 43.9 bits (102), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 70/340 (20%), Positives = 127/340 (37%), Gaps = 64/340 (18%)

Query: 246 GVLVCAENFVIYKNQGHPDVRAV------IPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
           GVLV + N + Y +Q      A+      +    ++P     + + AA          LL
Sbjct: 316 GVLVISANTIHYHSQSASCALALNSYAVTLDSSQEIPRSSFNVELDAANATWLLSDVALL 375

Query: 300 QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF-- 357
            T+ G++  +TL +D   V  L +       +++ +  + +   F AS  G+  L QF  
Sbjct: 376 STKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSC 435

Query: 358 ------------QAIGADPDVEASSSTLME------------------------TEEGFQ 381
                       + +G D + +A S  L                          TE   +
Sbjct: 436 GSGVSMLSSNLKEEVG-DIEADAPSKRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQK 494

Query: 382 PVFFQPR-GLKNLVRIEQVESLMPI-MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
              F  R  L N+  ++     + I  D     + ++   ++    G G   SL +LR  
Sbjct: 495 SFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQS 554

Query: 440 LAVSEMAVSQLPGVPSAVWTVKKNV--------------NDEFDAYIVVSFNNATLVLSI 485
           +    +   +LPG    +WTV                  +DE+ AY+++S    T+VL  
Sbjct: 555 IRPEVITEVELPGC-KGIWTVYHKSTRSHNADSSKMADDDDEYHAYLIISLEARTMVLET 613

Query: 486 GETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
            + + EV++S   ++      A +L G   ++QV+  G R
Sbjct: 614 ADLLSEVTESVDYYVQGKTLAAGNLFGRCRVIQVYERGAR 653


>gi|380481704|emb|CCF41690.1| CPSF A subunit region, partial [Colletotrichum higginsianum]
          Length = 932

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 120/558 (21%), Positives = 223/558 (39%), Gaps = 59/558 (10%)

Query: 246 GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGD 305
           G++V  E  ++Y +      R V+    + PA    + V+ A +     F   L  +YG+
Sbjct: 212 GLIVVGETLLVYVDTL---TRTVVESGLNSPA----IFVAWAAYDDTNYF---LSDDYGN 261

Query: 306 IFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPD 365
           +  +T+E +   V+ L ++        + +  + +G LF  S +G+  L Q        +
Sbjct: 262 LHLLTIETEGVVVTNLSLRLLGVTSRASCLVHMGNGLLFLGSHYGDSQLLQI-------N 314

Query: 366 VEASSSTLMETEEGFQPVF-FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTL 424
           +E+  + L++T     P+  F    L N              D ++ N F     +I   
Sbjct: 315 MESLKTRLVQTIPSIAPILDFSIMDLGN------------AGDSQVGNAFSSGQARIVAG 362

Query: 425 CGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLS 484
           CG     SLR +R  + + ++ V +       +++++ + + + D  +VVSF   T + S
Sbjct: 363 CGVHQNGSLRSIRSSVGLEDIGVLEDLQDVRGLFSLRSHGSPKVDT-LVVSFITETRIFS 421

Query: 485 IGET--VEEVSD-SGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI--NEWRTPGK 539
                 +EEV +  G     P+L  + + D  L+QV  + +  +  +  I  N W  P  
Sbjct: 422 FDPEGGIEEVFEFQGLALDRPTLVATTLPDGRLLQVTSTTVTLLESERGITLNTWAVPDG 481

Query: 540 RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE-VEKHEMSG---DVACLDIASVPEG 595
           + IV   +N   V+++++G  L+   +       E V   ++ G    ++C+  AS  + 
Sbjct: 482 KAIVNASANNKWVLLSINGTTLVSLNLLNNLSAQEQVLGRDIGGHEDQISCIHAASDLDD 541

Query: 596 RKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHP 655
                F A GS  + I + +LD      I       S P  L  +++           HP
Sbjct: 542 VGVVGFWATGSV-SIIDLRTLDALHGETIKQTDDSVSVPRDLALVQL-----------HP 589

Query: 656 ASLF---LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGR---AAMLC 709
             L    L   +++G +    V      LS  +S  LG +   L  +   G    + +  
Sbjct: 590 PHLLGPTLFVAMEDGQVVSFNVSKQDFSLSSRKSVTLGSQQAGLHVLPRPGGEGISNIFA 649

Query: 710 LSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETF 769
            +    L Y   GR + +  + E + Y A F S+   + +       +R+  I+    T 
Sbjct: 650 TTEHSSLIYSSEGRIIYSAATAEDVTYIAPFDSEAFPDAIFLATDQNIRIAHIDAERRT- 708

Query: 770 NETALPLRYTPRRFVLQP 787
           +   LPLR T RR    P
Sbjct: 709 HVNPLPLRETVRRVAYSP 726


>gi|321459381|gb|EFX70435.1| hypothetical protein DAPPUDRAFT_257163 [Daphnia pulex]
          Length = 78

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/60 (65%), Positives = 49/60 (81%), Gaps = 2/60 (3%)

Query: 73  QKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKG-RAVMI 131
           + D +VVGS+SG+I+IL YN +KNVFDK HQ T+GKSGC RIVPGQ++A+D KG RA  I
Sbjct: 3   EADNLVVGSNSGQIIILGYNTAKNVFDKAHQVTYGKSGC-RIVPGQHMAIDLKGIRACAI 61


>gi|167517245|ref|XP_001742963.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778062|gb|EDQ91677.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1670

 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 248/1278 (19%), Positives = 459/1278 (35%), Gaps = 235/1278 (18%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y ++  +P+ +  A+  NF+      +++ +   LE+ +    G +E ++  +++G++ +
Sbjct: 48   YVVSSFKPSAVTTAVRANFTAPDELNLLILKHSHLEVYKVVEEG-LEPVMDKDLYGSVLA 106

Query: 64   LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVP-GQYLAV 122
            +   RL G ++D + + + + R  IL  +    V   I       S C+R    G ++AV
Sbjct: 107  MNVIRLPGWERDAVFLLTSTFRFFILASDEDNGVVTVIKGNAL--SSCQRPADCGVHVAV 164

Query: 123  DPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFA 182
             PKG  + +       L+   +           P+EA+     V S+  +D  F N    
Sbjct: 165  HPKGNCIFVSVYPGNALIIPFDAS-------GEPMEAYSVFVPVSSL--LDATFVNGAHD 215

Query: 183  AIELDYSEADQDSTGQAASEAQKNLTFYELDLG-LNHVSRKWSEPVDNGANMLVTVPGGG 241
                  S+ D + T         +L  + LD+     V  + ++   N  +  +      
Sbjct: 216  FTLALLSDDDTNFT---------SLKMFHLDVEERTLVEEQLADSTINTYSSRLLPLWNL 266

Query: 242  DGPSGVLVCAENFVIYKNQGHPDVRAVIPR-------RADLPAERGVLIVSAATHRQKTL 294
            D  SGVLV  E               V P           LP   G++    +       
Sbjct: 267  D--SGVLVLGEELC----------HVVTPSGIISSNLSESLPVAAGIIDTDGSR------ 308

Query: 295  FFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
               L+  E GD+  + LE   E  V+ +  ++   I   +++  L +G ++  S+  +  
Sbjct: 309  --ILIGDELGDLHLLVLEGIAERRVTSIVRQHLGRISTPSAIVYLDNGVVYIGSDQADCQ 366

Query: 354  LYQFQA-IGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI-EQVESLMPIMDMRIA 411
            L Q  + + A+ D                          N V++ ++  ++ PI+D  + 
Sbjct: 367  LIQLLSHVQAEAD--------------------------NKVKVLQEYPNIGPIVDFEMV 400

Query: 412  NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN---DEF 468
            +L      Q+ + CG      LRILR G+ +  +A   L G+   +W ++   N   D+ 
Sbjct: 401  DLDGHGQQQVVSCCGSNQDGCLRILRKGVGIDVLASLDLEGLQD-LWCLRSASNLGEDQH 459

Query: 469  DAYIVVSFNNATLVLSI-GETV---------------EEVSDSGFLDTTPSLAVSLIGDD 512
            D  + + F   T  LS+ G+ V               + V  +G     P+L    + D 
Sbjct: 460  DV-LALKFLEQTAFLSLAGDEVCLLYSTPTSHSYTELDGVDVAGANTELPALHCGNVRDG 518

Query: 513  SLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTG 570
              + V     R +    R  +  W  P  + I    S    + +A SG +L    +  T 
Sbjct: 519  MWLVVTSQDARLLDAVDRTEVTRWSPPNGKGIDVCASTGDLLAVA-SGSDLYALSLSRTE 577

Query: 571  QLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQS- 629
             L +++   +  ++ACL I +    +     LA    D ++R  S       + L  Q+ 
Sbjct: 578  GLHDMKNATLDHEIACLSIRASGPDQGAGTILAGLWTDFSLRAFS------TRTLEEQAK 631

Query: 630  VSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFL 689
            V  P + +       ++ G        + +   G  +G L   V D ++          +
Sbjct: 632  VEVPTQVVSSSVASVTMEG--------TCYFFIGHGDGKLAYGVFDPLSSTFGAPHVVQV 683

Query: 690  GLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGV 749
            G  P KL +   G    +   + RP +    RG+ L   +S      A   +++  V+ +
Sbjct: 684  GSLPVKLRACKRGKDEFVFVATDRPMVVSSRRGKLLFCNVSAGACRTADVLNAEAYVDCL 743

Query: 750  VSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREA 809
              V  + L    +E + +      +PL  TP          L V      GA        
Sbjct: 744  AYVEQDRLVFGKMENM-QNLQIRKIPLDETP----------LGVTYHKSSGAFCVATD-- 790

Query: 810  AKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS 869
            A + C                           P   E   Y           +R++D +S
Sbjct: 791  AARAC---------------------------PTPQEPICY-----------LRLIDAQS 812

Query: 870  ANTTCLLELQDNEAAF--SICTVNFHDKEHGTLLAVGTAKGLQFWPKRNI-VAGYIHIYR 926
                   +L+  E+ F  S+ T+   + +    + VGTA      P R +   G I + R
Sbjct: 813  FEVRDSFKLEQAESLFGHSLHTMQLRN-DSTEYIVVGTA---MHDPNRPLPKQGRILVLR 868

Query: 927  FVEEGKSLELL--HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCE---NK 981
              ++GK LEL+  H     GI  +L  F+  ++AGI   L  + L    L RK E     
Sbjct: 869  VNDDGK-LELVVSHAIHDGGI-FSLQAFRDGVVAGINGRLEYFSLESTPLERKVEVASQT 926

Query: 982  LFP--NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD 1039
            +F    T+  +    + + VGDI +S     Y    N+  +   D   R+L        D
Sbjct: 927  VFRGMQTVSCLGVCGNTVLVGDILQSVTAVNYSEQRNRFVVGPGDPESRYLLTCFLPAED 986

Query: 1040 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV--------- 1090
                 D   N+     P D    +E D +   +    G+++   N    ++         
Sbjct: 987  RFLFCDSDQNLVLGMPPVDT---VENDAS---LMHLAGRIHIGDNINSYVICACIHVWTP 1040

Query: 1091 ------------------QFHVGDVVTSLQKASLVPGGGES---------VIYGTVMGSL 1123
                              +F  G +  S ++ +     GE          +++ TV+G +
Sbjct: 1041 YLLCPDSTFCFAALFVTSRFAFGSLSLSYERPAEAGEAGEDGAKQQSSPPIVFTTVLGGV 1100

Query: 1124 GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-------AYFPVKDVIDGDLC 1176
            G +L    +  + F   ++  +      + G  H  YRS       +  P +  +DG+L 
Sbjct: 1101 GMILEVQQK-HLWFMHEMQRRLADMGNAVGGLTHEDYRSTKNGKRESVTPARCFVDGNLI 1159

Query: 1177 EQFPTLSLDLQRKIADEL 1194
            E F  L+ +   ++  E 
Sbjct: 1160 ESFLELTPEEMEEVMKEF 1177


>gi|301628217|ref|XP_002943254.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Xenopus (Silurana) tropicalis]
          Length = 628

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 146/643 (22%), Positives = 247/643 (38%), Gaps = 128/643 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR----PENSGR-------- 48
           MY        PTG+  ++  NF       +VVA    L + R     E+S +        
Sbjct: 1   MYAVYRQAHPPTGLEFSMYCNFFSNSERNLVVAGTSQLYVYRLNPNCESSSKGEKGSEVK 60

Query: 49  -----IETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
                +E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  GHKEKLELMASFSFFGNVMSMASVQLAGAKRDALLLSFKEAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR  ++     Q +V    RDT A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHNPKVRVDPSGRCAVMLIYGTQLVVLPFRRDTLAEEHDGLVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            KS  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QKSSFLPSYIIDVRELDEKLLNIIDMQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--WS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        WS    P D    + V  P G     GV++ A N ++Y NQ  P
Sbjct: 240 IVAISLNIMQKVHPVIWSLTNLPYDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSVP 294

Query: 264 ----DVRAVIPRRADLPAE-----RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHD 314
                + ++       P +     R  L  S AT          L+   G+I+ +TL  D
Sbjct: 295 PYGVSLNSLTNGTTSFPLKPQEGLRVTLDCSQATFISYDKMVISLKG--GEIYVLTLITD 352

Query: 315 NEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQ--------AIGAD 363
              +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++             D
Sbjct: 353 G--MRSVRSFHFDKAAASVLTTSMTPMEPGYLFLGSRLGNSLLLRYTEKVQDSPAGPSKD 410

Query: 364 PDVEASSSTLMETEEGFQPVFFQPRGLK-NLV-RIEQVE--------------------- 400
           PD +         ++       +P G K N+V  I+++E                     
Sbjct: 411 PDKQDEPPN---KKKRVDSSLARPGGSKGNMVDEIDEIEVYGSEMQSGTQLSTYSFEVCD 467

Query: 401 SLMPIMDMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVS 448
           S++ I     A++ E        +E+P    +I    G G   +L +L+  +    +   
Sbjct: 468 SILNIGPCATASMGEPAFLSEEFQESPEPDLEIVLCSGYGKNGALSVLQKSIRPQVVTTF 527

Query: 449 QLPGVPSAVWTVKKN----------------VNDEFD----AYIVVSFNNATLVLSIGET 488
           +LPG    +WTV  N                V  E D     ++++S +++T++L  G+ 
Sbjct: 528 ELPGC-HDMWTVISNHKKEEQEGEKEGETPPVEAEEDTNRHGFLILSRDDSTMILQTGQE 586

Query: 489 VEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIRHIREDGR 530
           + E+  SGF    P++    IGD+  ++QV P GIR + E GR
Sbjct: 587 IMELDTSGFATQDPTVYAGNIGDNKYIVQVSPRGIR-LLEGGR 628


>gi|18377609|gb|AAL66955.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
          Length = 270

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 37/285 (12%)

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIVSINTYRD 995
            + +G   +L  F G+LLA I   ++LY     D G + L  +C +       + + T  D
Sbjct: 2    ETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI-LALYVQTRGD 60

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
             I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+   N+  V+ 
Sbjct: 61   FIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVK- 119

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP------- 1108
                             K  +G  +    ++E + ++H+G+ V   +  SLV        
Sbjct: 120  -----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEI 162

Query: 1109 GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-----A 1163
            G   +VI+GTV G +G ++A   ++   F   L+  +R+    + G  H  +RS      
Sbjct: 163  GQIPTVIFGTVNGVIG-VIASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKR 221

Query: 1164 YFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
                ++ +DGDL E F  LS +    I+  ++    E+ K++EE+
Sbjct: 222  TAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEEL 266


>gi|356530945|ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1449

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/418 (22%), Positives = 181/418 (43%), Gaps = 74/418 (17%)

Query: 827  NMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSA----NTTCLLELQDNE 882
            N  Q  N D++N++ P+ + +              +R+++P  +     T   + +Q +E
Sbjct: 1063 NESQNMNPDEQNRFYPIDEFE--------------VRIMEPEKSGGPWQTKATIPMQSSE 1108

Query: 883  AAFSICTV---NFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIY---RFVEEGKSL- 934
             A ++  V   N   KE+ TLLA+GTA    +    ++ A G I ++   +  +  ++L 
Sbjct: 1109 NALTVRMVTLLNTTSKENETLLAIGTA----YVQGEDVAARGRILLFSLGKITDNPQTLV 1164

Query: 935  ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
              ++  +++G   AL   QG LL   GP + L+      L         P  +VS+N  +
Sbjct: 1165 SEVYSKELKGAISALASLQGHLLIASGPKIILHKWNGTELNGIAFFDAPPLHVVSLNIVK 1224

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVR 1054
            + I +GDI +S +F  ++    QL + A D                    D F   + + 
Sbjct: 1225 NFILIGDIHKSIYFLSWKEQGAQLSLLAKD----------------FGSLDCFATEFLID 1268

Query: 1055 LPQDVSDEIEEDPTGGKIKWEQGKLNGA--PNKMEEIVQFHVGDVVTSL---------QK 1103
                +S  + +D    +I +   K++ +    K+    +FHVG  VT            +
Sbjct: 1269 -GSTLSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDR 1327

Query: 1104 ASLVPGGGES----VIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMHMRQEHPPLCGRDH 1157
            A  VPG  ++    +++GT+ GS+G +      D++ F     L+  +    P + G + 
Sbjct: 1328 AGSVPGSDKTNRFALLFGTLDGSIGCIAPL---DEITFRRLQSLQRKLVDAVPHVAGLNP 1384

Query: 1158 MAYR------SAYFPVKD-VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
             A+R       A+ P  D ++D +L   +  L L+ Q +IA+++  T  +IL  L ++
Sbjct: 1385 RAFRLFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIANQIGTTRSQILSNLSDL 1442



 Score = 43.5 bits (101), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 70/340 (20%), Positives = 127/340 (37%), Gaps = 64/340 (18%)

Query: 246 GVLVCAENFVIYKNQGHPDVRAV------IPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
           GVLV   N + Y +Q      A+      +    ++P     + + AA          LL
Sbjct: 318 GVLVIGANTIHYHSQSASCALALNNYAVTLDSSQEIPRSSFNVELDAANATWLLSDVALL 377

Query: 300 QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF-- 357
            T+ G++  + L +D   V  L +       +++ +  + +   F AS  G+  L QF  
Sbjct: 378 STKTGELLLLMLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSC 437

Query: 358 ------------QAIGADPDVEASSSTLME------------------------TEEGFQ 381
                       + +G D +V+A S  L                          TE   +
Sbjct: 438 GSGVSMMSSNLKEEVG-DIEVDAPSKRLRRSPSDALQDMVSGEELSLYGSATNRTESAQK 496

Query: 382 PVFFQPR-GLKNLVRIEQVESLMPI-MDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPG 439
              F  R  L N+  ++     + I  D     + ++   ++    G G   SL +LR  
Sbjct: 497 SFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQS 556

Query: 440 LAVSEMAVSQLPGVPSAVWTV--------------KKNVNDEFDAYIVVSFNNATLVLSI 485
           +    +   +LPG    +WTV                + +DE+ AY+++S    T+VL  
Sbjct: 557 IRPEVITEVELPGC-KGIWTVYHKSTRSHNADSSKMADDDDEYHAYLIISLEARTMVLET 615

Query: 486 GETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
            + + EV++S   ++      A +L G   ++QV+  G R
Sbjct: 616 ADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGAR 655


>gi|340521192|gb|EGR51427.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1161

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 174/854 (20%), Positives = 329/854 (38%), Gaps = 139/854 (16%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +PT I  A+   F      ++VVA+   LE+ R    G +  L +  I G I  
Sbjct: 3   YVAPVHKPTSIRHALRIRFLSPDIEDLVVAKANRLEIWRVHEEG-MTCLHTKVIHGTIDM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ--ETFGKSGCRRIVPGQYLA 121
           L + +   S  D + +G+D  +   L +NP  N  D + Q  E   +   R+        
Sbjct: 62  LQRLQPKDSATDLLFIGTDRLQYFNLAWNPETNQLDAVEQTIEDTAEPYMRQSQSQNRCL 121

Query: 122 VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA----------HKSHTIVYSICG 171
           VDP G+ + +   E    V+ L      R  +++ LE            K+ T +YS  G
Sbjct: 122 VDPTGKFMAMHLWEGVLNVFRLR----IRKGLTTKLEGLDQVRLTELWMKASTFLYSRTG 177

Query: 172 IDCGFDNPIFAAI---ELDYSEA--------DQDSTGQAAS-EAQKNLTFYELDLGLNHV 219
                 +P  A +   +LD  EA        + D  G ++  + QKN  F E       V
Sbjct: 178 ------HPTIAFLYKNQLDREEARIAVYRLTEDDKPGVSSKFDPQKNRDFEE-------V 224

Query: 220 SRKWSEPVDNGANMLVTVP-------------GGGDGPSGVLVCAENFVIYKNQ-GHPDV 265
            R      D  A+ML+ VP             G      G+LV  E  + Y +   +  V
Sbjct: 225 IR------DPYASMLIPVPVYEEKRYHVRNNEGARAHLGGLLVVGETLLTYFDSLTYSSV 278

Query: 266 RAVIPRRADLPAERGVLIVSA---ATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH----V 318
            + +       AE  + +  A    TH       +LL  +YG +  + ++  NE     V
Sbjct: 279 CSSL-------AEPKIYVAWAEYDGTH-------YLLADDYGRLDMLEIKTTNESTGVVV 324

Query: 319 SELKIKYFDTIPVT------ASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
           + +++  F    ++      +S+  + +  LF  S  G+  L +        D+E    T
Sbjct: 325 TGMEVHPFAFEDLSRYTSRASSLVYMGNNLLFIGSHHGDSQLLRI-------DIETQQMT 377

Query: 373 LMETEEGFQPVF-FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRS 431
           L++      P+  F    L N              D +  N F     +I   CG     
Sbjct: 378 LLKVLPNNAPIMDFTIMDLGNREG-----------DAQAGNTFSSGQARIVAGCGAYQDG 426

Query: 432 SLRILRPGLAVSEMA-VSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVE 490
           SLR +R G+ + +   + + PG    ++T++   +++ D  +V +     ++    E++E
Sbjct: 427 SLRSIRSGVGLEDRGLLDEFPGT-RGLFTLRSVDSEKVDTVVVSTLAGTRVLRFEPESIE 485

Query: 491 EV-SDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED--GRINEWRTPGKRTIVKVGS 547
           EV S  G    + +L  + + +  L+Q+ P  +  +  +    +  W++P  + I    +
Sbjct: 486 EVYSFQGMDLESETLLAANLPNGQLLQITPRVVTLLDPESGASLCSWQSPDGKVITAASA 545

Query: 548 NRLQVVIALSGGELIYFEV--DMTGQLLEVEKHEMSG---DVACLDIASVPEGRKRSRFL 602
           N    ++++ G  L+   +   +   + +  ++ +SG    ++C+  A  P       + 
Sbjct: 546 NTKWALLSIDGSLLVSLNLLDGLKAVVQDASENPVSGQPDQISCIHAARDPPDFGVVGWW 605

Query: 603 AVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL---F 659
           A G+  + + + +L P     +      +S P  +  +++           HP  +    
Sbjct: 606 ASGTI-SVVDLATLTPLHGESLRQTDDSASVPRDVALVQL-----------HPPDMSGPT 653

Query: 660 LNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVV-VGGRAAMLCLSSRPWLGY 718
           L   L++G +    V +    +S  ++  LG  P +L  +    G   +   +    L Y
Sbjct: 654 LLVALEDGNVISFNVSLKGFSISGRKTVTLGSGPARLHVLPRPDGICNVFATTEHASLIY 713

Query: 719 IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI--ERLGETFNETALPL 776
              GR + +  + +   + A F S+   + +V      +R+  +  ERL       +LP+
Sbjct: 714 SSEGRIVYSATTADDATFVAPFDSEAFPDSIVLSTDEHIRICHVDSERLTHV---KSLPM 770

Query: 777 RYTPRRFVLQPKKK 790
             T RR    P  K
Sbjct: 771 HETVRRVAYSPGLK 784


>gi|326474493|gb|EGD98502.1| UV-damaged DNA binding protein [Trichophyton tonsurans CBS 112818]
 gi|326481558|gb|EGE05568.1| UV-damaged DNA binding protein [Trichophyton equinum CBS 127.97]
          Length = 1147

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 221/1046 (21%), Positives = 401/1046 (38%), Gaps = 205/1046 (19%)

Query: 224  SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLI 283
            S+ ++ GA++L+ VP       G+LV  E+ + Y +    +    I R     AE  V +
Sbjct: 244  SDEIELGASILIPVP---RPLGGLLVIGESSIKYVDVSKNET---ISRPL---AESTVFV 294

Query: 284  VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKSGY 342
                   Q+    +LL  +YG +F + L  D ++ V   K+ Y       + +  L  G 
Sbjct: 295  AWEQVDGQR----WLLADDYGRLFFLMLVLDTDNAVESWKVDYLGVTSRASVLVYLDGGI 350

Query: 343  LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            +F  S  G+  + Q +  G D                                I+ + ++
Sbjct: 351  VFVGSHQGDSQVIQIKEGGFD-------------------------------LIQTISNI 379

Query: 403  MPIMDMRIANL---------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
             PI+D  I ++         F     +I T  G     SLR +R G+ + E+ V      
Sbjct: 380  APILDFTIMDMGDRLGATREFSSGQTRIVTGSGAFGDGSLRSVRSGVGIEELGVLASMEH 439

Query: 454  PSAVWTVKKNVNDEFDAYIVVSFNNATLVL--SIGETVEEVSDS--GFLDTTPSLAVSLI 509
             + +W ++    + F   ++VSF N T V   S    VEE  D   G + +  +L  + I
Sbjct: 440  ITDLWALRSACPEPFSDTLLVSFVNETRVFHFSADGDVEEKEDGFLGLVFSQSTLLATNI 499

Query: 510  GDDSLMQVHPSGIRHIREDGRINEWRTPGKR-TIVKVGSNRLQVVIALSGGELIYFEVDM 568
              + ++QV  S  R I  DG +  WR+  +  TI    +N   +V+ L G  L+   +  
Sbjct: 500  PGNRILQVTESSSRVIDIDGGMIIWRSTYEEFTITSASANDDYLVLVLGGIRLVCISLS- 558

Query: 569  TGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQ 628
            T +L+   + E    V+ + I + P        +        I IL L     +++ + Q
Sbjct: 559  TFELIGSREFEADNQVSGMTIPASP----IQACIVCLPQSAEIVILGL---PGLEVKNKQ 611

Query: 629  SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRF 688
            ++  P E++     ++ +  E   ++P +LF++  + +G +F    D+    + +S    
Sbjct: 612  TLGEPGEAI----PRSVIVAEILPNNPPTLFVS--MADGTVFSFSFDVHAFAIFNSSKIT 665

Query: 689  LGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVE 747
            LG   P    +  G G+  +      P L +   GR + + +   +     S ++ Q   
Sbjct: 666  LGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEGRIVYSAVDSASASRICSLNT-QAYP 724

Query: 748  GVVSVAG-NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEE 806
            G ++++  + L++  ++    T   T LP+  + RR    P +K                
Sbjct: 725  GSIALSSQHELKIAIVDEERTTQIHT-LPMHASVRRLAYSPVEK---------------- 767

Query: 807  REAAKKECFEAAGMGENGNGNMDQMENGDDE-NKYDPLSDEQYGYPKAESDKWVSCIRVL 865
                      A G+G        ++ NG +E +    L+DE    P +  D        L
Sbjct: 768  ----------AFGLGTVKR----KISNGVEEVSSSFVLADEILFRPLSTYD--------L 805

Query: 866  DPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLA-----VGTAKGLQFWPK--RNIV 918
             P      C++  Q          +N+   E G L++     VGTA    F      + +
Sbjct: 806  RPDEL-VECVIRSQ----------LNYGKDEVGNLISKDLFFVGTA----FLDDVGDDHI 850

Query: 919  AGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQF-QGRLLAGIGPVLRLYDLGKKR---- 973
             G I ++  V   + L L+ +  + G    L    Q  L+AG+   + ++ L + R    
Sbjct: 851  RGRILVFE-VNRSRELSLIVEKSLMGACRTLAVMDQTLLVAGLVKSVSVFKLARGRFGNI 909

Query: 974  LLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN-----QLYIFADDSVPR 1028
            LL K          + I+   + + V D+ +S    +Y + E      +    A      
Sbjct: 910  LLEKHAAYRTSTAPIDISVVDNTVAVADVMKSMSLVQYTQAEEGGQEPKFEEIARHYQTL 969

Query: 1029 WLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEED-----PTGGKIKWEQGKLNGAP 1083
            W TA   I+ +    AD  GN+  V L Q+++   E D     PT       + +L    
Sbjct: 970  WSTAVAPIEENVYLLADAEGNL--VVLQQNITGVTESDRRRLQPTS------EIRLGEMV 1021

Query: 1084 NKMEEI-VQFHVGDVVTSLQKASLVPGGGESVIYG--------------TVMGSLGAMLA 1128
            N++  I VQ H    V++  +A L    G   ++G              T MGS+     
Sbjct: 1022 NRIHPIVVQTHTETAVSA--RALLATVDGSIYLFGLINPNYVDLLLRLQTAMGSIA---- 1075

Query: 1129 FSSRDDVDF--FSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDL 1186
             +S  ++ F  +      +RQ   P                   +DG+L E+F + +L +
Sbjct: 1076 -TSPGEIPFSKYRAFRTTVRQSDEPF----------------RFVDGELIERFLSCTLAM 1118

Query: 1187 QRKIADELDR---TPGEILKKLEEIR 1209
            Q++I   LD    T   + + +EE+R
Sbjct: 1119 QQEIVGRLDDSTVTVSSLKEMIEELR 1144


>gi|242803623|ref|XP_002484212.1| UV-damaged DNA binding protein, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218717557|gb|EED16978.1| UV-damaged DNA binding protein, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 1140

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 171/839 (20%), Positives = 314/839 (37%), Gaps = 130/839 (15%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y + + + + +  A+  NF   +   +VVA+G  LE       G   T  S  ++  I  
Sbjct: 3   YVVPIHRASSVRYALKLNFLEPEEDCLVVAKGARLEFYSITPDGLTLT-TSRALYAKISM 61

Query: 64  LAQFRL-TGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQE----TFGKSGCRRIVPGQ 118
           LA+    T S  D+++VG+D      L+++  K    ++  E           R    G 
Sbjct: 62  LARLPTPTNSTTDHLLVGTDQNTYFTLKWDSEKQ---RVRTERSYVDLADKASRPCQNGD 118

Query: 119 YLAVDPKGRAVMI-------------------GACEKQKLVYVLNRDTAARLT--ISSPL 157
              +DP GR + +                   G     K  +  N D        +  P+
Sbjct: 119 RCLIDPSGRFMTLEMFEGIITVIPIIQPHKKRGKPPVLKTSHYSNPDEPVPQIGELGEPM 178

Query: 158 EAHKSHTIVYSICGIDC-GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGL 216
                  +V S   +       P  A +  D     +    +   EA   + F E     
Sbjct: 179 PTRIDELMVRSSAFLHVESKAAPRLALLHEDNQRKVRLKIRELHFEASTEVVFQE----- 233

Query: 217 NHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLP 276
              +  ++E +D GA+ L+ VP       G+LV  E  + Y +  + +    I R  D  
Sbjct: 234 ---TEDFTEELDLGASHLIPVPAP---LGGLLVLGETCIKYIDDANNET---ISRPLD-- 282

Query: 277 AERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASM 335
            E  + +       Q+    +LL  +YG +F + L  D+ + V   KI Y  +    + +
Sbjct: 283 -EATIFVAWVQVDGQR----WLLADDYGRLFFLMLVLDSRNEVEGWKIDYLGSASRASVL 337

Query: 336 CVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVR 395
             L +G  F  S  G+                   S ++   EG   +            
Sbjct: 338 IYLGAGMTFIGSHQGD-------------------SQVIRISEGSFEI------------ 366

Query: 396 IEQVESLMPIMDMRIANL-----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSE 444
           I+ + ++ PI+D  I +L           F     +I T  G     +LR +R G+ + E
Sbjct: 367 IQTISNIAPILDFTIMDLGTREGDNYTHEFSSGQARIVTGSGAFNDGTLRSVRSGVGMEE 426

Query: 445 MAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSL 504
           + V       + +W ++ +  DEF   +VV+F N T +          SD    +    L
Sbjct: 427 LGVLGEMEHITDMWALQVSSTDEFSDTLVVTFVNETRIFQFS------SDGEVEELDEFL 480

Query: 505 AVSLIGDDSLMQVHPSG-IRHIREDG----------RINEWRTPGKRTIVKVGSNRLQVV 553
            ++L  +  L    P G I H+ E G           I++W +P ++TI     N  ++V
Sbjct: 481 GLNLAENTLLSNNLPGGRIIHVTERGVSIADTDSGMVISKW-SPDEQTITSAACNDERLV 539

Query: 554 IALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRI 613
           + ++GG++I   +D+TG L  + + +   D     + ++P    ++ F+A       + +
Sbjct: 540 V-VTGGQVIVV-LDITGDLKVLSQKDFDKDNQVSGV-TIPPASTQA-FIAAFPQKAQVAV 595

Query: 614 LSLDPDDCMQILSVQSVSSP-PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRT 672
           LS      +   S+   S   P ++L  E+          D P++LF++  + +G +   
Sbjct: 596 LSFQDFKELHSQSLGIASEAFPRAVLLAEIL--------EDSPSTLFVS--MADGSVVTF 645

Query: 673 VVDMVTGQLSDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSY 731
             D     L+      LG   P    +  G G   +      P L Y   GR + + ++ 
Sbjct: 646 FYDSDNHSLTSKNKLILGSEQPTFKKLPRGNGLYNVFATCEHPSLIYGSEGRIIYSAVNS 705

Query: 732 ETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
           E       F+++   + +       L++  +++   T  +T LP+  T RR    P +K
Sbjct: 706 EGASRVCHFNAEAYPDAIAVATSKDLKIALVDKERTTQIQT-LPIEATVRRVAYSPTEK 763


>gi|71016864|ref|XP_758932.1| hypothetical protein UM02785.1 [Ustilago maydis 521]
 gi|46098463|gb|EAK83696.1| hypothetical protein UM02785.1 [Ustilago maydis 521]
          Length = 1549

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 134/571 (23%), Positives = 236/571 (41%), Gaps = 84/571 (14%)

Query: 272  RADLPAERGVLIVSAATHRQKTLFFFLLQTEYG--DIFKVTLEHDNEHVSE-------LK 322
            R  LP    V+ V          F  L     G  ++ ++ +   ++HV+        L+
Sbjct: 493  RVSLPHPVQVVSVVDMADADADAFSVLFACNSGALNVLRLGMPDHSQHVASQLPQPRSLR 552

Query: 323  IKYFDTIPVTA---SMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEG 379
            ++   T    A   ++  L  G +   S  G++ LY+     A   + ASSS  + T   
Sbjct: 553  VEALGTTSQPAGPQALSYLGQGLVCVGSATGDNCLYRIIGQNASQKMPASSSEQVLTPPS 612

Query: 380  FQPVFFQPRGL-----------------KNLVRIEQVESLMPIMDMRI-------ANLFE 415
              P   Q R +                  +LV +E  ++L P++D  +            
Sbjct: 613  -SPT--QSRSMLSHAASSSRDHSELSTGGSLVNLETWQNLGPVVDFVVDDGAGGDPTYAS 669

Query: 416  EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYI--V 473
                +I T  G GP  S+R  R G +V ++A   +P     +W+V   V+D     I  +
Sbjct: 670  SAQARIVTCSGLGPTGSVREARSGASVRDIASLPIPNA-EQIWSVDAGVDDASKLTIGLL 728

Query: 474  VSFNNATLVL------SIGETVEEVSDSGFLDTTPSLAVS--LIGDDS--LMQVHPSGIR 523
            V F  +T  L       + +  +++  +G   + P++A +  L  D S  L++V  +G  
Sbjct: 729  VGFATSTAYLHFNADGDLTDATDQLVAAGANVSLPTIAATTVLFHDRSPQLLRVDRTGAS 788

Query: 524  HIR-EDGRI---NEWRTPGKRTIVKVGSNRL-QVVIALSGGELIYFEVDMTGQLLEVEKH 578
                +D  I   ++WR P +  +     N + Q ++ALS   L+Y   D  G L+E  K 
Sbjct: 789  LFSVQDASISILDQWRPPNELEVTSASVNSVGQAILALSDKSLLYL-TDEDGALIERNKK 847

Query: 579  EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILS---VQSVSSPPE 635
             +  +V+C+DI+ +  G K ++ +A G +   +      PD  ++++        SS P 
Sbjct: 848  MLEDEVSCVDISPLIAG-KAAQLVACGFWGRDVFDFYNLPD--LEVVPRGFAAEFSSVPR 904

Query: 636  SLLFLEVQASVGGEDGAD----------HPASLFLNAGLQNGVL--FR---TVVD---MV 677
            S+L    ++S   E  +D          +P   +L  GL +G L  FR    V D    V
Sbjct: 905  SILLHRFESS-QPEKASDAEFEFWGFNPNPLDAYLLIGLGDGTLVSFRLGGIVADGNAYV 963

Query: 678  TGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS-SRPWLGYIHRGRFLLTPLSYETLEY 736
               L D+++  LG +  KL ++     A ++ +S SRP L Y    RF  + L Y+    
Sbjct: 964  PVSLYDAKTITLGTQALKLDAIKTSTGARVVAISGSRPTLVYHDSKRFSYSALKYKDPRS 1023

Query: 737  AASFSSDQCVEGVVSVAGNALRVFTIERLGE 767
             A+  +       V V  ++L + +I  LG+
Sbjct: 1024 VATVCAGPGRVFAVVVLTDSLELTSISALGQ 1054


>gi|449661926|ref|XP_002167992.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Hydra magnipapillata]
          Length = 1122

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 123/569 (21%), Positives = 235/569 (41%), Gaps = 72/569 (12%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVF--DKIH--- 102
           R+E L S  +FG I ++   RL  + +D +++     ++ I+E++P  +    D +H   
Sbjct: 67  RLELLASFTLFGNIINMQVVRLGSNVRDSLLLAFKHAKLSIVEFDPLSHDLKTDSMHYFE 126

Query: 103 QETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKS 162
            + F K G    +    + VDP+ R   +    +  +V     D   +L  S  L   + 
Sbjct: 127 NDEF-KGGLSHNIYLPLVRVDPEQRCACMLIYNRHLVVLPFKHDI--KLDESEELSDGEH 183

Query: 163 HTIVYSICGIDC-GFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNLTF 209
              V     ID    + P+    EL +             E  Q STG+ A       TF
Sbjct: 184 IKSVLPSYMIDLHSLEQPLLNITELQFLHGYHQPTLMFLFEPVQTSTGRVAVRQD---TF 240

Query: 210 YELDLGLNHVSRK----WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
               + LN   +     WS    P D      +  P GG     VLV A N +IY NQ  
Sbjct: 241 CVSAISLNMTEKVHPVIWSVTNLPFDCHMLRPIEKPIGG-----VLVFASNSLIYLNQSI 295

Query: 263 P----DVRAVIPRRADLP---AERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     + ++       P    E  V+ ++ ++        F+L  + G+I+ ++L  D 
Sbjct: 296 PPYGVSLNSITEGSTMFPLKIQEDVVITLAESSCDAIATDQFILSLKGGEIYVLSLLSDG 355

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
             +  ++  +F+      + + +C ++ G++F  S  GN  L ++         E  S++
Sbjct: 356 --LRTVRSFHFEKAAGSVLASCVCWIEHGFVFLGSRLGNSLLLRY--------TEKDSAS 405

Query: 373 LME-TEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIAN-------LFEEEAPQIFTL 424
           + E ++E      +       ++  + + ++ PI    +          F      +  +
Sbjct: 406 IAEKSKEAKVEKMYGGGVGGGIIVCDSLLNIGPITKAALGEPAFLSEEFFGSRQIDLEMV 465

Query: 425 C--GRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV----KKNVNDEFDAYIVVSFNN 478
           C  G G   +L +L+  +    +   +LPG  + +WTV     K   + + +Y+++S ++
Sbjct: 466 CCSGYGKNGTLTVLQRSIRPQVVTTFELPGCVN-MWTVCGKSSKESVENYHSYLILSRDD 524

Query: 479 ATLVLSIGETVEEVSDSGFLDTTPSL-AVSLIGDDSLMQVHPSGIRHIREDGRINEWRTP 537
           +T+VL  G  + E+ +SGF    P++ A + + +  ++QV P  I  + +  +IN     
Sbjct: 525 STMVLKTGAEITELDNSGFNVQQPTIFACNHLSNKYILQVCPQSIHLLEDTVQINSISLQ 584

Query: 538 GKRTIVKVGSNRLQVVIALSGGELIYFEV 566
               I +   +   VV+  S G+LIY +V
Sbjct: 585 DTIKITQCSISDPYVVMVDSTGQLIYLQV 613


>gi|326426696|gb|EGD72266.1| hypothetical protein PTSG_00286 [Salpingoeca sp. ATCC 50818]
          Length = 1104

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 163/810 (20%), Positives = 308/810 (38%), Gaps = 145/810 (17%)

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA----YIVVS 475
            ++ T  G G   SLR+++ G+ ++  A  QL  +   VW + K   +   A    ++ +S
Sbjct: 369  RLVTASGAGKDGSLRVIQRGVNITSSATVQLDDL-QRVWVLTKPSGEAEAATEESFLALS 427

Query: 476  FNNATLVLSI-GETVEEVSDSGF----LDTTPSLAVSLIGDDSLMQVHPSGIRHIRED-- 528
            F      L   GE +      GF      + P+L  S + ++  + V    +  +  +  
Sbjct: 428  FAGGLAFLQFEGEEL-----CGFEVPSAPSDPALLCSNVAENQWLFVTEDEVVLVCAETL 482

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
             R+ EW+    + I     +  Q+V++ SG +L+ FE+   G+L + +   +  +++CLD
Sbjct: 483  ARVAEWKAAEGQAIGACACSEKQLVVS-SGRQLLIFEI-AKGKLTQTKDTTLEHELSCLD 540

Query: 589  IASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGG 648
            I  +P     +  +  G+++   ++  L         S++  SS P     +    ++  
Sbjct: 541  I--LPVNDDGTSVMVAGTWNVEAKVYHLP--------SMRVASSAPFKAGVIATSCAI-- 588

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAML 708
                D   + F   G+ +G + R +    +  +++ R    G +P  L S       A++
Sbjct: 589  TRLGDQNVAFF---GMGDGSVVRYIFAEGSWHMTNQRHVHAGKQPVSLVSCKFASGPAVV 645

Query: 709  CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             LS+   L Y   GR   + L+   L   A  S+    + +V     +L +  I R+   
Sbjct: 646  ALSNTSLLFYADSGRVTFSTLNEANLTCVAPLSTPAYPDSLVFSTPASLGIGQIGRM-NN 704

Query: 769  FNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNM 828
             +   + L ++P            V++                              G++
Sbjct: 705  LHINKVALGFSPVSLTTISANPSYVVVV-----------------------------GHV 735

Query: 829  DQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSIC 888
            DQ + G                         S IRV D  +       EL   EA   + 
Sbjct: 736  DQEDGG-----------------------IASAIRVFDGTTLEMVASHELPAPEAVNCVI 772

Query: 889  TVNFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIP 946
               F D ++     +GTA     +  P R    G I I +  E  K + ++H+ +  G  
Sbjct: 773  QHKFKD-DNTEYFIIGTAFVDPTETQPSR----GRILISKL-ENKKEIAIVHECEAAGSV 826

Query: 947  LALCQFQGR----LLAGIGP--VLRLYDL----GKKRLLRKCENKLFPNTIVSINTYRDR 996
              L +  G+    L+AGI    V   YD       K+L     N+ F   +VS+++  D 
Sbjct: 827  YCLTKMCGKDTDDLVAGINNQVVHFKYDATGQDAAKKLRAVSGNQNF-GAVVSLDSCDDI 885

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLP 1056
            + VGD+  +    +  +D+ QL   A      W+++   ++      A    ++   +  
Sbjct: 886  VLVGDMLNAVFVMQKAQDKLQL--VAGSQTANWVSSCALVNETVFLVASHAHSLSVCQR- 942

Query: 1057 QDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL---------V 1107
                            ++E G      N   EI   ++G+ VTS  +A+L         +
Sbjct: 943  ----------------EFEPGSTMQTLNAKFEI---YLGETVTSFVRAALGSAAAVDSSM 983

Query: 1108 PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPV 1167
            P      ++GT+ G L  +L  +     +  + LE  M ++   L G DH  +R+A    
Sbjct: 984  PLRNTFFVFGTMGGGLACLLPLTP-PQTELLTALECRMEEKIGGLGGLDHREFRTARDEQ 1042

Query: 1168 K-------DVIDGDLCEQFPTLSLDLQRKI 1190
            +        ++DGDL E F  L  + Q+++
Sbjct: 1043 RMAQQVNPRLVDGDLVETFLQLPEEEQKEL 1072


>gi|116195210|ref|XP_001223417.1| hypothetical protein CHGG_04203 [Chaetomium globosum CBS 148.51]
 gi|88180116|gb|EAQ87584.1| hypothetical protein CHGG_04203 [Chaetomium globosum CBS 148.51]
          Length = 1127

 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 108/570 (18%), Positives = 228/570 (40%), Gaps = 73/570 (12%)

Query: 246 GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGD 305
           G+LV  E  ++Y ++       V         ++  + V+ A + +   F   L  +YG+
Sbjct: 205 GLLVVGETRLLYIDE-------VTKATVQSALKQASIFVAWAEYNETNYF---LADDYGN 254

Query: 306 IFKVTL---EHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGA 362
           +  +TL     D+  V+ +++         + +  L    LF AS +G+  L++      
Sbjct: 255 LHLLTLVRESPDSVVVTSMEVNRIGKTSRASHLVFLGGDMLFVASHYGDSQLFRLD---- 310

Query: 363 DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI-----------A 411
                                 FQ   +  +  ++ + ++ PI+D  I            
Sbjct: 311 ----------------------FQNEDVPPIQLVQTLANIGPILDFAIMDMGRGDEGQQG 348

Query: 412 NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY 471
           N +     +I T  G     SLR +R G+ + ++ +         ++++K     + +  
Sbjct: 349 NEYSSGQARIVTCSGVHKDGSLRSVRSGVGLEDVGILADLEHCRGLFSLKTYEAPKTN-I 407

Query: 472 IVVSFNNATLVLSI---GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
           +  SF   T V      GE  E  S +G      +L    +    ++QV P+ +  +  +
Sbjct: 408 LAASFLTETRVFKFDPQGEVEELDSFAGMTFNQQTLLARCLSTAQILQVTPAAVTLLDAE 467

Query: 529 G--RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVAC 586
               I+ W    +++I+    N   +++++ G EL+ F +D+  +L+  ++      +AC
Sbjct: 468 SGLTIDSWTPGAQKSIISASGNNKSLLLSVDGTELVLFSIDINLRLVRTKEIGYQDQIAC 527

Query: 587 LDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASV 646
           + +  +        F + G+  + I + SL+P    Q+ +    +S P  L  +++  +V
Sbjct: 528 IHVPPLRNDLAVVGFWSSGTV-SIIDLPSLEPMHGEQLRTSPDDASIPRDLALVKLLDNV 586

Query: 647 GGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA- 705
           GG        +LF+     N + F    +    +L+  +   LG+R  + F ++    A 
Sbjct: 587 GG-------GTLFVAMQDGNVITFNLSENF---RLTGRKRVILGMRQAR-FHLLPQPDAP 635

Query: 706 ---AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
              ++   +  P L Y   GR + + ++ E   Y   F ++   + +V    N L++  I
Sbjct: 636 HIYSIFATTEHPSLIYGSEGRIVYSAVTAEEATYICPFDTEAFPDCIVLATDNQLKISHI 695

Query: 763 ERLGETFNETALPLRYTPRRFVLQPKKKLM 792
           +R   T +   LP+    RR    PK+K+ 
Sbjct: 696 DRERRT-HVKPLPMNEMVRRIAYSPKEKVF 724


>gi|198415711|ref|XP_002123169.1| PREDICTED: similar to cleavage and polyadenylation specificity
           factor 1, partial [Ciona intestinalis]
          Length = 1370

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 131/624 (20%), Positives = 240/624 (38%), Gaps = 120/624 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIET--------- 51
           MY +   +  PTG+   +  NF+  K   ++V     L + R E +  + T         
Sbjct: 1   MYAWYRQIHAPTGVEQCVYCNFASEKEKNLLVTAASQLTVYRLERNYEVTTKTENGEENT 60

Query: 52  --------LVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPS----KNVFD 99
                   + S ++FG +  +   RL G++ D +++     ++ I+E++ +    K    
Sbjct: 61  VVKEKLQQIGSWQLFGNVVRMRSVRLAGAKLDSVLLSFAEAKLSIIEFDQATHDIKTTSL 120

Query: 100 KIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAA---------- 149
              ++   K G  + +    +AVDP+ R V +    K   V  L  +TAA          
Sbjct: 121 HYFEDALYKDGSYQRITLPKIAVDPESRCVALQLTTKSVAVVPLRANTAALATDDGAAPQ 180

Query: 150 --------RLTISSPLEAHKSHTIVYSICGIDC--GFDNPIFAAIELDYSEADQDSTGQA 199
                   R T S  ++ H     +  I  I    G++ P    +     E+ +   G+ 
Sbjct: 181 DNVSLQNKRSTTSYTIDLHAVDARLQRIIDIQFLHGYNEPTLLVL----FESLRTWAGRV 236

Query: 200 ASEAQK-NLTFYELDLGLNHVSRKWS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFV 255
           A      N+    L++        WS    P D      V  P G     GVL+ A N +
Sbjct: 237 AMRQDTCNIVAISLNMAEQLHPVVWSLNGLPFDCKYAYPVPKPIG-----GVLIFAVNSI 291

Query: 256 IYKNQGHP----DVRAVIPRRADLP--AERGVLIVSAATHRQKTLFF----FLLQTEYGD 305
           +Y NQ  P     + +        P   +  V +    +H    +F      ++  + G+
Sbjct: 292 LYLNQSVPPYGTSLNSTTENSTSFPLKPQEDVCMTLDCSH---AMFISPESLVISLKNGE 348

Query: 306 IFKVTLEHDNEHVSELKIKYFD---TIPVTASMCVLKSGYLFAASEFGNHALYQF----- 357
           ++ +TL  D+  +  ++  +FD   +  +T+ + VL  G+LF  S  GN  L ++     
Sbjct: 349 LYVLTLLVDS--MRSVRNFHFDKSASSVLTSCLTVLDDGFLFLGSRLGNSLLLKYTEARP 406

Query: 358 ---------------QAIGADPDVEASSSTLMETE-EGFQPVFFQPRGLKNLVRIEQVES 401
                          + +    D  AS +  ++ +  G   V  +P    +  + E  +S
Sbjct: 407 VFRNCYHTEEPAAKRKRLNTAADWAASDTNDIDLQMYGKDTVTSEPL---SSYKFEVCDS 463

Query: 402 LMPIMDMRIANLFE------------EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ 449
           L+ I     A L E            E   ++  L G G   ++ +L+  +    +   +
Sbjct: 464 LVNIGPCGAAELGEPAFLSEEFVSQRESDLELAILSGHGKNGAISVLQRSVKPQVVTTFE 523

Query: 450 LPGVPSAVWTVKK---------NVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDT 500
           LPG    +WTVK              +  +Y+++S   +TL+L  G+ + EV +SGF   
Sbjct: 524 LPGCID-MWTVKSVCEKTELPTKTQQQQHSYLILSREESTLILETGKEIMEVENSGFNTR 582

Query: 501 TPSLAVSLIGDDS--LMQVHPSGI 522
             S+ V  IG D   ++QV  SG+
Sbjct: 583 EQSVFVGNIGGDKELILQVCASGV 606


>gi|300175350|emb|CBK20661.2| unnamed protein product [Blastocystis hominis]
          Length = 240

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 5/151 (3%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGA 60
           M+LY   L   T +   + G+F G    + ++  G  + L    + G+   +V+  +FG 
Sbjct: 1   MFLYHKILSYGTNVNGVVTGHFLGNNDLQFIILSGTSISLYSVID-GKEYNVVTQTLFGT 59

Query: 61  IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYL 120
              + + +L+   KD IV+ SDSG + IL Y+   + F  I    FGK GC   VPGQYL
Sbjct: 60  GLVIQRLKLSDYFKDLIVLTSDSGCMSILWYSLESSSFQTIANFQFGKPGCLLEVPGQYL 119

Query: 121 AVDPKGRAVMIGACEKQKLVYVL----NRDT 147
           AV+     + IGA   + LVY L    N DT
Sbjct: 120 AVNADNNLIAIGALGGEILVYSLEHSINYDT 150


>gi|406865227|gb|EKD18269.1| CPSF A subunit region [Marssonina brunnea f. sp. 'multigermtubi'
           MB_m1]
          Length = 1146

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 123/560 (21%), Positives = 230/560 (41%), Gaps = 53/560 (9%)

Query: 297 FLLQTEYGDIFKVTL--EHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
           +LL  +YG++  +++   HD E V  + +    TI    +M  L  G  F     G+H  
Sbjct: 299 YLLGDDYGNLHLLSILSNHDGE-VMGMDLMLLGTISKATTMVNLGDGVFFV----GSHEA 353

Query: 355 YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM------ 408
            + Q I  D D +    T+++T +   P+                   + +MDM      
Sbjct: 354 -ESQVIRVDLDRKDHYITIIQTMQNIAPILD-----------------LAVMDMGNREGE 395

Query: 409 RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAV-SQLPGVPSAVWTVKKNVNDE 467
             +N +     ++ T  G     SLR +R G+ + ++ +     G    V++++      
Sbjct: 396 SQSNEYSTGQTRLVTGSGAFQSGSLRSVRSGVGLEDIGILVDEIGDIRDVYSMRSTAGTH 455

Query: 468 FDAYIVVSFNNATLVLSIGETVEEVSD-SGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
           FD  +VVS    T V +    +EEV++  G      +L  S + +  ++QV  S ++ + 
Sbjct: 456 FDDILVVSLPTETRVFTFLGEIEEVAEFRGLELNCQTLLASGLSNGMMLQVTESSVKILG 515

Query: 527 EDGRI--NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV 584
                   +W  P    I    +N   V++++SG  L+  ++    + + V+  E +  V
Sbjct: 516 PGPSYVAAKWTPPAGEYITDASANDSYVLVSVSGTTLVSLDIGQGLKEVAVQPLEAADQV 575

Query: 585 ACLDIASVPEGRKRSRFLAVGSYDN-TIRILSLDPDDCM--QILSVQSVSSPPESLLFLE 641
           AC+    VP  R  S    VG + + +I IL+L   + +  + L  ++ +S P  ++  +
Sbjct: 576 ACV---YVP--RNLSDIGVVGFWKSGSISILNLSNLEIILSEDLRRKNNASIPRHIILAQ 630

Query: 642 VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV-V 700
           +  +V         A   L   +++GV+    VD  T  LS  +S  LG    K   +  
Sbjct: 631 LLPAVA--------AGPTLFVAMEDGVVLTFNVDKSTFSLSGRKSLVLGTEHAKFHLLPR 682

Query: 701 VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVF 760
            GG   +L     P L Y   GR + + ++ +  + A  F+S++    +V     +L++ 
Sbjct: 683 EGGLNNVLATCEHPTLIYASEGRIVYSAVTADDAKCACPFNSEEYPGSLVVATQRSLKIS 742

Query: 761 TIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGM 820
            I+   +T   T + +  T RR      ++   I   ++     EER  +     E    
Sbjct: 743 KIDDERQTHVRT-VHIGKTVRRIAYSGAERAFGIGCIERTMADKEERYTSTFSLVEDVKF 801

Query: 821 GENGNGNMDQMENGDDENKY 840
            E GN      ENG +  +Y
Sbjct: 802 AEVGNPVPLDDENGTELIEY 821


>gi|367033707|ref|XP_003666136.1| hypothetical protein MYCTH_2310607 [Myceliophthora thermophila ATCC
           42464]
 gi|347013408|gb|AEO60891.1| hypothetical protein MYCTH_2310607 [Myceliophthora thermophila ATCC
           42464]
          Length = 1043

 Score = 76.6 bits (187), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 108/512 (21%), Positives = 204/512 (39%), Gaps = 50/512 (9%)

Query: 297 FLLQTEYGDIFKVTLEHDNEH---VSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
           + L  +YG++  +TL  +N     V+ L + +       + +  L +  LF  S +G+  
Sbjct: 190 YFLADDYGNLHLLTLVTENADSVVVTSLDVNWIGKTSRASHLVYLGNDLLFVGSHYGDSQ 249

Query: 354 LYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM----- 408
           L++      DP    +   L++T     P+                     IMDM     
Sbjct: 250 LFRLDLQNEDP---KALLQLVQTLHNIGPILD-----------------FAIMDMGNRGD 289

Query: 409 --RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
             ++ N +     +I T  G     SLR +R G+ + ++ +         ++++K     
Sbjct: 290 EGQLGNEYSSGQARIVTCSGVHKDGSLRSVRSGVGLEDVGILADLEHCRGLFSLKSYGAP 349

Query: 467 EFDAYIVVSFNNATLVLSI---GETVEEVSDSGF-LDTTPSLAVSLIGDDSLMQVHPSGI 522
           + D  + VSF   T V      G+  E  S +G   D    LA  L G   L+QV P+  
Sbjct: 350 KTD-ILAVSFLTETRVFKFDAQGDVEELESFAGLAFDQQTLLATDLQGG-RLLQVTPAAA 407

Query: 523 RHI-REDG-RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
             +  E G  +  W+   +R+I+   +N   +++++ G EL+   +    Q++       
Sbjct: 408 TVLDTESGLTVASWKPGDQRSIINASANSKSLLLSVDGTELVSLSISDDLQVVRTRDISK 467

Query: 581 SGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFL 640
              +AC+ + + P+      F + G+  + I + +L+P     + + Q  +S P  L  +
Sbjct: 468 QDQIACIHVPAQPDNVGVVGFWSSGTV-SIIDLHTLEPIHGESLRTSQDDASIPRDLALV 526

Query: 641 EVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV- 699
           ++        G   P +LF+     N V F    D+    LS  +   LG+R  +L  + 
Sbjct: 527 QILPP-----GVSGP-TLFVAMQDGNVVTFNITKDLA---LSGRKRVILGMRQARLHLLP 577

Query: 700 VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
              G  ++   +  P L Y   GR + + ++ E   Y   F +    E +       L++
Sbjct: 578 QPDGIYSIFATTEHPSLIYGSEGRIVYSAVTAEEATYICPFDAQAFPECIALATDKQLKI 637

Query: 760 FTIERLGETFNETALPLRYTPRRFVLQPKKKL 791
             I+R   T +   L +    RR    PK+K+
Sbjct: 638 CHIDRERRT-HVKPLAMNEMVRRIAYSPKEKV 668


>gi|449549048|gb|EMD40014.1| hypothetical protein CERSUDRAFT_63520 [Ceriporiopsis subvermispora B]
          Length = 1265

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 173/860 (20%), Positives = 317/860 (36%), Gaps = 160/860 (18%)

Query: 396  IEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMA-VSQLPGVP 454
            ++  +++ PI+D  +A+L +    QI T  G     +L+++R G    E+A V+ + G+ 
Sbjct: 457  LDTFQNIAPIVDAVLADLDDSGQSQIITCSGGRNSGALKVVRTGADFQELARVNGITGIT 516

Query: 455  SAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGE----TVEEVSDSGFLDTTPSLAVSLIG 510
            S +W V+       D+++V S    T V         T  + S  GF+ T P+LA + I 
Sbjct: 517  S-LWPVRSRFEHSTDSHLVASTETETYVFKFDSSDVITQLDSSADGFITTAPTLAAANIP 575

Query: 511  ----------------DDSL-MQVHPSGIRHIREDGR------INEWRTP-------GKR 540
                            D SL +QV P  I  +  D        + E   P       G+R
Sbjct: 576  RRVSTNAGGRVSSSYVDSSLVIQVTPEMITLLEYDAALGLFSLVGEGWDPKSQGAIGGRR 635

Query: 541  TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGD--VACLDIAS---VPEG 595
             IV    N  Q+V+ L GG++    +    +  +V++     D     LD+++   VP  
Sbjct: 636  RIVAADVNASQIVVGLDGGKVCLLNLADNSR-FQVQRSRGFADPVYGPLDVSAVSCVPFD 694

Query: 596  RKR--SRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGED 650
            R +  +  +AV  +  N ++ILS+   D     +  V  + S P S+L          ++
Sbjct: 695  RTKNFATNIAVAFWGTNKVQILSISSQDATLATVCEVSGLPSLPRSVLLHNFGTGRTKKE 754

Query: 651  GADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCL 710
               HP  L    GL +G +      +V  +L + +   LG+ P  L    V G+  +  +
Sbjct: 755  PDFHPHVL---VGLVDGSVIS--FSVVENELKEKKVFSLGIAPVSLSRCEVDGKITVFAV 809

Query: 711  SSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFN 770
             SR  + Y  + R   +P+  + +    S ++      +V  A + L + TI R  +   
Sbjct: 810  GSRTSVLYWDKQRLTNSPVMIKDMAVGTSLNTSYFRSSLVLAASSGLIIGTI-RGVDKMQ 868

Query: 771  ETALPLRYT-PRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
              ++P   + PRR     + KL                           G+G        
Sbjct: 869  IRSIPFGLSDPRRIAYHSRLKLF--------------------------GVG-------- 894

Query: 830  QMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICT 889
                    N+  PL   ++           S  +++D  + N     ELQ NE   S+  
Sbjct: 895  -------CNRTMPLRPGEF-------QGTTSSFKIIDATTFNGLWDFELQANEEVSSVMA 940

Query: 890  VNFHDKEHGTLLAVGTAKGLQFWPKRNI--VAGYIHIYRFVEEGKS------LELLHKTQ 941
            +            VGT     F+        +G + ++    +G +      L L+    
Sbjct: 941  LPDGTDGRSPCFCVGTV----FFEVEETEPTSGRLLLFAIGSDGATSSADGELRLVTTQD 996

Query: 942  VEGIPLALCQFQGRLLAGIGPVLRLY---DLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            V+G    +      + A I   + L+   D  K+  L++  +      + ++ ++ DR+ 
Sbjct: 997  VKGCVFQITSVNNFIAAAINSNVVLFALRDTNKQYALQQVADWNHNYFVTNLASHGDRLI 1056

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD   S      R    ++   + D  P W  A      + + GA+   N++   L   
Sbjct: 1057 VGDAISSVSL--LRVSVARIECLSRDYSPLWPVAVEATAENQIIGANSDCNLFSFAL--- 1111

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES----- 1113
                  +   G K+             +E    +H+ D+V       LV     +     
Sbjct: 1112 ------QHIDGRKV-------------LERDGSYHLDDIVNKFAPGGLVAADSSTGYTLR 1152

Query: 1114 --VIYGTVMGSLGAMLAFSSRDDVDF-FSHLEMHMRQEHPPLCGRDHMAYRS-------- 1162
               ++ +  G +G ++     D++    + L+M+M +        +H  +R+        
Sbjct: 1153 PRQLFFSSSGRIGVIIDVD--DELSLPLTSLQMNMAKRIKGPGDTNHTEWRAPTNARGRT 1210

Query: 1163 -AYFPVKDVIDGDLCEQFPT 1181
             A       +DGD  EQF T
Sbjct: 1211 DAEASAFGFLDGDFIEQFLT 1230


>gi|166158025|ref|NP_001107422.1| damage-specific DNA binding protein 1, 127kDa [Xenopus (Silurana)
            tropicalis]
 gi|157422734|gb|AAI53474.1| Zgc:63840 protein [Danio rerio]
 gi|163916541|gb|AAI57552.1| LOC100135265 protein [Xenopus (Silurana) tropicalis]
          Length = 306

 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 36/299 (12%)

Query: 920  GYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCE 979
            G I ++ + + GK L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   
Sbjct: 12   GRIIVFHYTD-GK-LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTEC 69

Query: 980  NKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD 1039
            N       + + T  D I VGD+  S     Y+  E      A D  P W++A   +D D
Sbjct: 70   NHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNWMSAVEILDDD 129

Query: 1040 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVT 1099
               GA+   N++  +  +D +   +E+                   ++E+  FH+G+ V 
Sbjct: 130  NFLGAENAFNLFVCQ--KDSAATTDEE----------------RQHLQEVGLFHLGEFVN 171

Query: 1100 SLQKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP 1150
                 SLV         P  G SV++GTV G +G + +  S         L+  + +   
Sbjct: 172  VFSHGSLVLQNLGESSTPTQG-SVLFGTVNGMIGLVTSL-SEGWYSLLLDLQNRLNKVIK 229

Query: 1151 PLCGRDHMAYRSAYFPVKD-----VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKK 1204
             +   +H  +RS +   K       IDGDL E F  L     +++   L    G  +K+
Sbjct: 230  SVGKIEHSFWRSFHTERKTEQATGFIDGDLIESFLDLGQAKMQEVVSTLQIDDGSGMKR 288


>gi|321475208|gb|EFX86171.1| hypothetical protein DAPPUDRAFT_313209 [Daphnia pulex]
          Length = 1260

 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 129/601 (21%), Positives = 232/601 (38%), Gaps = 113/601 (18%)

Query: 12  TGIIAAINGNFSGTKTPEIVVARGKVL-----------ELLRPENSG------RIETLVS 54
           T +  AI   F G +   +VVA   VL           ++LR E++       ++E L S
Sbjct: 12  TSVEHAIYCRFYGGREKNLVVAGANVLRVFRLIPNTDEKMLRKESADGQPPKMKLECLAS 71

Query: 55  TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKS----- 109
             +FG + S+A   L GS +D I++     ++ ++EY+P  +    +    F        
Sbjct: 72  YNLFGKVMSIAAVSLPGSSQDTILMSFAHAKLSLIEYDPVSDNLKTLSLHNFEVVSILDE 131

Query: 110 --GCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTA--ARLTISSPLEAHKSHTI 165
             G    +P   + VDP+GR   +        +    +D+A  + +T+SS          
Sbjct: 132 GIGSNHKIPE--IRVDPEGRCAALLIFRNTLAILPFRKDSAHDSNVTLSS---------Y 180

Query: 166 VYSICGIDCGFDNPIFAAIELDYSE------------------ADQDSTGQAASEAQKNL 207
           +  +  ++   DN I       Y E                    QD+    A       
Sbjct: 181 IIKLTDLEERVDNVIDVQFLHGYYEPTLIILYEPVGTFPGRIAVRQDTCNMVAVSLNTQQ 240

Query: 208 TFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRA 267
             + +   LN      S P D    + V  P GG      L+ A N VIY NQ  P    
Sbjct: 241 RVHPIIWSLN------SLPFDCSQLLPVPKPLGG-----ALIMAVNSVIYVNQSVPPYGV 289

Query: 268 VIPRRAD-------LPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN-EHVS 319
            +   AD        P E   + +  A          +L  + G+++ +TL  D+   V 
Sbjct: 290 SVNSIADHCTSFPLKPYEGSRIGLDCARAAFLQYDRVVLSLKGGELYVLTLFADSMRSVR 349

Query: 320 ELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA----------IGADPDVEAS 369
           +  ++      +T  +C+  + YLF  S  GN  L  FQ               P +E  
Sbjct: 350 KFHLEKAAASVLTTCLCICDN-YLFLGSRLGNSLLLAFQTKDYNQYATPFAAKKPKMEQF 408

Query: 370 SSTL------METEE-------------GFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI 410
           S         ++ EE               + + +Q     +L+ I     +        
Sbjct: 409 SLLFDQELDHLDEEEIDNYLYGEDHESTDSKAISYQFEVCDSLLNIGPCGQMAVGEPAST 468

Query: 411 ANLFEEEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVND 466
              F++++P    +I T  G G   ++ +L+  +    +   +LP V S ++TV  + N+
Sbjct: 469 CTDFDKKSPDPDVEIVTTSGYGKNGAICVLQRTMKPQVVTTFELPEV-SDMFTVFASRNN 527

Query: 467 E---FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGI 522
           E      Y+++S  ++T+VL  G+ + E+  SGF  T+P++  + +G++  ++QV P+ +
Sbjct: 528 EDAIMHTYLLLSRADSTMVLQTGQEINEMDQSGFSVTSPTILAANLGNNRFIVQVCPTSV 587

Query: 523 R 523
           R
Sbjct: 588 R 588


>gi|194474008|ref|NP_001124043.1| cleavage and polyadenylation specificity factor subunit 1 [Rattus
           norvegicus]
 gi|149066087|gb|EDM15960.1| cleavage and polyadenylation specific factor 1, 160kDa (predicted),
           isoform CRA_a [Rattus norvegicus]
          Length = 1386

 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 134/634 (21%), Positives = 240/634 (37%), Gaps = 124/634 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+  A+  NF       +VVA    L + R         +N G     
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE 316
                +           L  + GV I +  A     +    ++  + G+I+ +TL  D  
Sbjct: 295 PYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG- 353

Query: 317 HVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTL 373
            +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +S++
Sbjct: 354 -MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PASSV 408

Query: 374 METEEGFQPVFFQPR--------GLKNLVRIEQVE------------------------S 401
            E  +  +P   + R        G K    ++++E                        +
Sbjct: 409 REAADKEEPPSKKKRVDPTVGWTGGKTQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLN 468

Query: 402 LMPIMDMRI---ANLFEEEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP 454
           + P  +  +   A L EE +P    +I    G G   +L +L+  +    +   +LPG  
Sbjct: 469 IGPCANAAVGEPAFLSEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC- 527

Query: 455 SAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGETVE 490
             +WTV   V  E +                         ++++S  ++T++L  G+ + 
Sbjct: 528 YDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTGQEIM 587

Query: 491 EVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 588 ELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 621


>gi|451856466|gb|EMD69757.1| hypothetical protein COCSADRAFT_32431 [Cochliobolus sativus ND90Pr]
          Length = 1116

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 116/515 (22%), Positives = 207/515 (40%), Gaps = 71/515 (13%)

Query: 297 FLLQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
           F+L  +YG ++   L  + +  V   K+         +++  L +GY+F  S  G+  + 
Sbjct: 282 FVLADDYGRLYMFMLVLNAQGRVQSWKLDVIGQTSRASTLVYLDAGYVFVGSHQGDSQVI 341

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI----- 410
           +                                  K++  ++   ++ PI+D  I     
Sbjct: 342 RIAE-------------------------------KSMEIVQTFSNIAPILDFTIMDMGN 370

Query: 411 ------ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
                  N +     +I T  G     SLR +R G+ + ++ V       S ++++K   
Sbjct: 371 RSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEMEHISELFSLKSTA 430

Query: 465 NDEFDAYIVVSFNNATLVL---SIGETVEEVSD--SGFLDTTPSLAVSLIGDDSLMQVHP 519
           + ++   ++VSF + + V    S GE VEEV +  S  LD T +LA + I    ++QV  
Sbjct: 431 SAQYIDTLLVSFVDESRVFRFDSQGE-VEEVDEFVSLALDET-TLAAANIPQGRIVQVTN 488

Query: 520 SGIRHIREDGRI--NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEK 577
              R    DG +  +EW     +TI     N   V+++L G  ++   +    Q+++ + 
Sbjct: 489 GRARICDLDGGMITSEWVPTDGKTITAASVNETHVLVSLGGVTIVSLSMANGLQVVKEKT 548

Query: 578 HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNT-IRILSLDPDDCMQILSVQSVSSPPES 636
                 VAC+   ++P G   + F  VG ++N+ + I SLD  + ++ + + S  S P S
Sbjct: 549 FGAESQVACV---TLPSGTSSTCF--VGFWNNSQLAICSLDTLEAVKTVQI-SDDSVPRS 602

Query: 637 LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKL 696
           LL  ++          D P SLF+   L +G +     D    +LS  +S  LG R    
Sbjct: 603 LLLTQI--------FPDQPPSLFV--ALADGNVVTYTFDQSNHELSGRKSIVLGTREATF 652

Query: 697 FSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGN 755
            ++  G G   +      P L Y   GR + + ++ E       F S+     V      
Sbjct: 653 RALPRGDGLFNVFATCEHPSLIYASEGRLVYSAVTAEKATTVCPFDSEAYPGSVAIATSQ 712

Query: 756 ALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
            LR+  ++    T  +T L +  T RR    P  K
Sbjct: 713 DLRIALVDTERTTHVQT-LKVDETVRRIAYSPSLK 746



 Score = 41.2 bits (95), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 6/135 (4%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +P+ +  A+  NF   +   +VVA+   LE    E  G +    S  I+G +  
Sbjct: 3   YIAPIHRPSSVRHALKLNFLAPEDDCLVVAKSNRLEFYTHEADGLVLKH-SKAIYGKVTM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGK---SGCRRIVPGQYL 120
           L + R   S  D++ VG+D      L +N  K       +++F     +  R    G+  
Sbjct: 62  LQKLRPALSPTDHLFVGTDRFMYFTLSWNTEKKQLQT--EKSFASVADNAARESQTGERC 119

Query: 121 AVDPKGRAVMIGACE 135
            +DP GR + I   E
Sbjct: 120 HIDPTGRFMTIEVYE 134


>gi|224587439|gb|ACN58665.1| DNA damage-binding protein 1 [Salmo salar]
          Length = 444

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 40/292 (13%)

Query: 920  GYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCE 979
            G I ++ + + GK L+ + + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   
Sbjct: 150  GRIIVFHYTD-GK-LQTVAEKEVKGAVYSMMEFNGKLLASINSTVRLYEWTAEKELRTEC 207

Query: 980  NKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD 1039
            N       + + T  D I VGD+  S     Y+  E      A D  P W++A   +D D
Sbjct: 208  NHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD 267

Query: 1040 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVT 1099
               GA+   N++  +  +D +   +E+                   ++E+  FH+G+ V 
Sbjct: 268  NFLGAENAFNLFVCQ--KDSAATTDEE----------------RQHLQEVGVFHLGEFVN 309

Query: 1100 SLQKASLV---------PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP 1150
                 SLV         P  G SV++GTV G +G + +  S         L+  + +   
Sbjct: 310  VFSHGSLVLQNLGESSTPTQG-SVLFGTVNGMIGLVTSL-SEGWYSLLLDLQNRLNKVIK 367

Query: 1151 PLCGRDHMAYRSAYFPVKD-----VIDGDLCEQFPTLSLDLQRKIADELDRT 1197
             +   +H  +RS +   K       IDGDL E F    LDL R    E+  T
Sbjct: 368  SVGKIEHSFWRSFHTERKTEQATGFIDGDLIESF----LDLGRAKMQEVVST 415


>gi|389744702|gb|EIM85884.1| hypothetical protein STEHIDRAFT_121882 [Stereum hirsutum FP-91666
           SS1]
          Length = 1255

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/419 (22%), Positives = 172/419 (41%), Gaps = 41/419 (9%)

Query: 391 KNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
           K L  +    ++ PI+D   A+      P I T  G     SLR++R G    E AV   
Sbjct: 453 KYLEVVHSWRNIAPILDAVKADTDGSGLPHIVTCSGGKSTGSLRVIRNGADFQEKAVVDG 512

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIG-----ETVEEVSDSGFLDTTPSLA 505
               + +W ++ + +D+  +Y+V S  + T +           VE  S+S F    P+LA
Sbjct: 513 LDNMTGLWALRSHNSDKDHSYLVASDKDETHLFRFEGPESLRRVESSSESYFRMNKPTLA 572

Query: 506 VSLIGD-DS--LMQVHPSGIRHIREDGRI------NEWRTPGKRTIVKVGSNRLQVVIAL 556
           V+ +GD DS  ++QV    ++ +  D  +      + W     + I     +  QV++AL
Sbjct: 573 VANVGDLDSSLILQVTSDKVQLLEFDAVLEIFHLSSHWSPESGKQITLASISPTQVLLAL 632

Query: 557 SGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSL 616
            GG ++   +D +  +  +     + +++ L  A                  N +  +S 
Sbjct: 633 DGGTVVLLGLDKSRNMTVLSTRLYNAEISALSCA----------------LPNALGAVSF 676

Query: 617 DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH-----PASLFLNAGLQNGVLFR 671
              D ++++S+   +    ++   E+ +S        H      + + L  GL NG++  
Sbjct: 677 WDSDRIELVSLGGSTPLLSTVTSREIGSSARARSILLHKFDSTSSEMQLLVGLTNGIMVA 736

Query: 672 TVV---DMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTP 728
            VV   +  T +L D ++  +G  P  L  V+V G  ++L   SR  + +  +GR   +P
Sbjct: 737 FVVASSETKTPELQDRKTFAMGNMPVLLVKVMVDGHTSVLASGSRSVVVFWEKGRLKTSP 796

Query: 729 LSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET--FNETALPLRY-TPRRFV 784
           +    +   A   +      VV   G+ L + ++  L +      TA P     PRR V
Sbjct: 797 VMLNNIFAGAPVDTPWSPSSVVLATGSKLIIGSVHGLDKMHIVPVTATPFGLDNPRRIV 855


>gi|221044336|dbj|BAH13845.1| unnamed protein product [Homo sapiens]
          Length = 222

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 40/250 (16%)

Query: 294 LFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHA 353
           LF  LL+ E      VTL+       +L+++      +   +  L +G +F  S  G+  
Sbjct: 5   LFMLLLEKEEQMDGTVTLK-------DLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQ 57

Query: 354 LYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANL 413
           L +   +  D + + S    MET                        +L PI+DM + +L
Sbjct: 58  LVK---LNVDSNEQGSYVVAMET----------------------FTNLGPIVDMCVVDL 92

Query: 414 FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIV 473
             +   Q+ T  G     SLRI+R G+ + E A   LPG+   +W ++ + N E D  +V
Sbjct: 93  ERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDTLV 151

Query: 474 VSFNNATLVLSI-GETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN 532
           +SF   T VL + GE VEE    GF+D   +     +    L+Q   SG R ++ +G+  
Sbjct: 152 LSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQPPGSG-RLVKPEGKFC 210

Query: 533 E-----WRTP 537
           +     W  P
Sbjct: 211 QFADQVWDVP 220


>gi|224120960|ref|XP_002318462.1| predicted protein [Populus trichocarpa]
 gi|222859135|gb|EEE96682.1| predicted protein [Populus trichocarpa]
          Length = 1455

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 171/385 (44%), Gaps = 65/385 (16%)

Query: 862  IRVLDPRSA--NTTCLLELQDNEAAFSICTV---NFHDKEHGTLLAVGTAKGLQFWPKRN 916
            +R+L+P +        + +Q +E A ++  V   N   KE+ TLLAVGTA    +    +
Sbjct: 1091 VRILEPSNGPWQVKATIPMQTSENALTVRMVSLFNTSTKENETLLAVGTA----YVQGED 1146

Query: 917  IVA-GYIHIYRFVEEGKSLELL----HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGK 971
            + A G I ++  V+  ++ ++L    +  +++G   AL   QG LL   GP + L+    
Sbjct: 1147 VAARGRILLFSVVKNPENSQILVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTG 1206

Query: 972  KRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLT 1031
              L     +   P  +VS+N  ++ I +GDI +S +F  ++    QL + A D       
Sbjct: 1207 TELTGVAFSDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKD------- 1259

Query: 1032 AAHHIDFDTMAGADKFGNIYFV---RLPQDVSDEIEEDPTGGKIKWEQGKLNGA--PNKM 1086
                      A  D F   + +    L   VSDE +      +I +   K++ +    K+
Sbjct: 1260 ---------FASLDCFSTEFLIDGSTLSLVVSDEQKNV----QIFYYAPKMSESWKGQKL 1306

Query: 1087 EEIVQFHVGDVVT----------SLQKASLVPGGGES----VIYGTVMGSLGAMLAFSSR 1132
                +FHVG +VT          SL ++   P   ++    +++GT+ GS+G +      
Sbjct: 1307 LSRAEFHVGALVTKFMRLQMLSPSLDRSGAAPVSDKTNRFALLFGTLDGSIGCIAPL--- 1363

Query: 1133 DDVDF--FSHLEMHMRQEHPPLCGRDHMAYR------SAYFP-VKDVIDGDLCEQFPTLS 1183
            D++ F     L+  +    P + G +  ++R       A+ P  + ++D ++   +  + 
Sbjct: 1364 DELTFRRLQSLQKKLVDAVPHVAGLNPKSFRQFRSDGKAHRPGPESIVDCEMLSYYEMIP 1423

Query: 1184 LDLQRKIADELDRTPGEILKKLEEI 1208
            L+ Q +IA ++  T  +IL  L ++
Sbjct: 1424 LEEQVEIAQQIGTTRAQILSNLNDL 1448



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 119/613 (19%), Positives = 224/613 (36%), Gaps = 124/613 (20%)

Query: 27  TPEIVVARGKVLEL--LRPENSG-------------------RIETLVSTEIFGAIRSLA 65
           TP ++VA G VLEL  +R +  G                    +E +    + G + S+ 
Sbjct: 58  TPNLIVASGNVLELYVVRVQEEGARSSGELKRGGVMDGVAGASLELVCHYRLHGNVESMG 117

Query: 66  QFRLTGS----QKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG-------KSGCRRI 114
              + G     ++D I++     +I +LE++ S +         F        K G    
Sbjct: 118 VLSVEGGDDSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPDWRHLKRGRESF 177

Query: 115 VPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLT------ISSPLEAHKSHTIVYS 168
             G  + VDP+GR   +   + Q ++    +  +A +         + + AH + + + +
Sbjct: 178 ARGPLVKVDPQGRCGGVLVYDLQMIILKAAQAGSALVQDEDAFGSGAAISAHIASSYIIN 237

Query: 169 ICGIDCG------FDNPIFAAIELDYSEADQDSTGQAASEAQKNL-TFYELDLGLNHVSR 221
           +  +D        F +     + +   E +    G+   +    + +   +   L   + 
Sbjct: 238 LRDLDMKHVKDFIFVHDYIEPVVVVLHERELTWAGRVVWKHHTCMISALSISTTLKQPTL 297

Query: 222 KWS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAV------IPRR 272
            WS    P D    + V  P GG     VLV   N + Y ++      A+      +   
Sbjct: 298 IWSIGNLPHDAYKLLAVPSPIGG-----VLVIGVNTIHYHSESASCALALNSYAASVDSS 352

Query: 273 ADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVT 332
            +LP     + + AA          LL T+ G++  +TL +D   V  L +       +T
Sbjct: 353 QELPRATFSVELDAANATWLLKDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLT 412

Query: 333 ASMCVLKSGYLFAASEFGNHALYQFQA-IGAD----------PDVE-----------ASS 370
           + +  L + + F  S  G+  L QF + +G+            D+E           +SS
Sbjct: 413 SDITTLGNSFFFLGSRLGDSLLVQFTSGLGSSMLSPGLKEEVGDIEGDLPSAKRLKVSSS 472

Query: 371 STLMETEEGFQPVFFQPRGLKNLVRIEQVESLM---------------PIMD----MRI- 410
             L +   G +   +      N     QV S++               P+ D    +RI 
Sbjct: 473 DALQDMVSGEELSLYS--SAPNNAESSQVVSVIKTFSFTVRDSLINVGPLKDFAYGLRIN 530

Query: 411 -----ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV----- 460
                  + ++   ++    G G   +L +L+  +    +   +LPG    +WTV     
Sbjct: 531 ADANATGISKQSNYELVCCSGHGKNGALCVLQQSIRPEMITEVELPGC-KGIWTVYHKNA 589

Query: 461 --------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS--GFLDTTPSLAVSLIG 510
                   K   +DE+ AY+++S    T+VL   + + EV++S   F+      A +L G
Sbjct: 590 RIHSVDSLKMASDDEYHAYLIISMEARTMVLETADHLTEVTESVDYFVQGRTIAAGNLFG 649

Query: 511 DDSLMQVHPSGIR 523
              ++QV   G R
Sbjct: 650 RRRVVQVFERGAR 662


>gi|354491124|ref|XP_003507706.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform 2 [Cricetulus griseus]
          Length = 1388

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 135/636 (21%), Positives = 243/636 (38%), Gaps = 126/636 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+  A+  NF       +VVA    L + R         +N G     
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNNERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFGKSGCR----RIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F +S  R    + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEESELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE 316
                +           L  + GV I +  A     +    ++  + G+I+ +TL  D  
Sbjct: 295 PYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG- 353

Query: 317 HVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTL 373
            +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +S++
Sbjct: 354 -MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PASSV 408

Query: 374 METEEGFQPVFFQPR--------GLKNLVR--IEQVE----------------------- 400
            E  +  +P   + R        G K + +  ++++E                       
Sbjct: 409 REAADKEEPPSKKKRVDPTAGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSM 468

Query: 401 -SLMPIMDMRI---ANLFEEEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPG 452
            ++ P  +  +   A L EE +P    +I    G G   +L +L+  +    +   +LPG
Sbjct: 469 LNIGPCANAAVGEPAFLSEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPG 528

Query: 453 VPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGET 488
               +WTV   V  E +                         ++++S  ++T++L  G+ 
Sbjct: 529 C-YDMWTVIAPVRKEEEEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTMILQTGQE 587

Query: 489 VEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 588 IMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 623


>gi|300176205|emb|CBK23516.2| unnamed protein product [Blastocystis hominis]
          Length = 702

 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 172/377 (45%), Gaps = 34/377 (9%)

Query: 862  IRVLDPRSANTTCLLELQDNEAAFSICTVNF----HDKEHGTLLAVGTAKGLQFWPKRNI 917
            +++ DP++      L L+ +E A  + + +     +  E   +  VGTA  L   P+ N 
Sbjct: 309  LQLRDPKTYAIRDELPLKPSEIALCVASGSIFPLSNAPERNEVFVVGTAFVL---PEENE 365

Query: 918  VA-GYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKK-RLL 975
             + G + + R VE    LEL+ +T + G  L++C F+G+++ G+   L+++D+ +K   +
Sbjct: 366  PSQGRLLVLRAVEH--RLELVAETMLSGGCLSICLFKGKVVCGVNSELQVFDVDEKTSTI 423

Query: 976  RKCENKLFPNTIVSI--NTYRDRIYVGDIQESFHFCKYR------RDENQLYIFADDSVP 1027
             K  +++   ++ S+  N   + I +GDI  S    K        R   QL   A +   
Sbjct: 424  SKLASEVACISVTSLSPNEADETIALGDILYSVVVYKLVLEVVRGRQLAQLECIASERRR 483

Query: 1028 RWLTAAHHID--FDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNK 1085
            R +TA   +      M   D +GN+  +++ ++ +D    +P    +  E   L+   N+
Sbjct: 484  RDVTALERLPEAQSEMVVGDAYGNLMVMQVVEE-ADLDRSNPQKIVVTKESFHLDDQINR 542

Query: 1086 MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHM 1145
               +  F  G      +K +       ++ + TV G +G + A + R +      +E  M
Sbjct: 543  FVPVQLFRSGAEDKKKEKRAEESEIAFNLAFATVSGRIGMIGALNDR-EFRMLRAIETAM 601

Query: 1146 RQEHPPLCGRDHMAYRSAYFP--VKDV---IDGDLCEQFPTLSLDLQRKIADELDR---- 1196
                 P+ G DH  +R +  P  +K++   IDGDL E F  L  + Q KIAD +      
Sbjct: 602  ENVITPVGGLDHKQWRCSNTPFGIKNLAYCIDGDLVEMFLELDDESQAKIADSVSTELRS 661

Query: 1197 --TPGEILKKLEEIRNK 1211
              +P  ++  L+++R+K
Sbjct: 662  ALSPQFLIDYLQDVRSK 678


>gi|213407660|ref|XP_002174601.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces japonicus
            yFS275]
 gi|212002648|gb|EEB08308.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces japonicus
            yFS275]
          Length = 1078

 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 183/911 (20%), Positives = 323/911 (35%), Gaps = 182/911 (19%)

Query: 304  GDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGAD 363
            G+ F VTLE   E             P+ + +  L +  +F  S FG+  LY+FQ     
Sbjct: 298  GNNFNVTLEKIGE------------APIASCIVALPNDQIFLGSHFGDSKLYRFQ---NK 342

Query: 364  PDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFT 423
            P V  S                       L+ ++  ++L PI D  I +        +  
Sbjct: 343  PGVAGSV---------------------ELLEVQSFDNLAPISDFCIDH--GNGGSFMVA 379

Query: 424  LCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL 483
             C      SLR ++ G+ +S+  V ++P           NV   +   +  S      V 
Sbjct: 380  CCNAYNEGSLREMKSGIDISDYGVIEMP-----------NVCSLYSVQLQSSVTKYLFVG 428

Query: 484  SIGET-VEEVSDSGFLDTTPSLAVS----LIG--DDSLMQVHPSGIRHIREDGR-INEWR 535
            SI ET V E+S SG +D   SL +      +G   DS    H +       DG+ ++ W 
Sbjct: 429  SISETSVFEISQSGEMDLVDSLCLEEPTIFVGATSDSSCLYHVARSSVCLFDGKQLSYWF 488

Query: 536  TPGKR-TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPE 594
              G   T   V  N   V ++++  ++++       +L  V K ++  DV  L   +   
Sbjct: 489  ADGGAITCAAVYDN--AVCLSMTNNQIVFLH-----KLQVVSKLQVDSDVTALSFLN--- 538

Query: 595  GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADH 654
                +R + VG ++  + +L  D   C  +     V+   +SL+ +++            
Sbjct: 539  ---DARTICVGLWNQKLLLLDSDNTTCT-VRETLEVNEKAQSLVCVKLAG---------- 584

Query: 655  PASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRP 714
             AS+ L    ++G L    +D VT  +    +  L   P  + +        ++ L   P
Sbjct: 585  IASVALYMSTESGKLITFDIDPVTKGIKQRLTYPLTAVPLNMNTFQTPNGPVLITLGEHP 644

Query: 715  WLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
            +  Y          +    +   +           V    NAL++  +  L +  +   +
Sbjct: 645  YAVYGENQHLSFAYIGNSDIVCLSHLQHPGIPANTVYATRNALKLSNVNML-QKLHIRRI 703

Query: 775  PLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENG 834
            P+   PRR                          AA KE                     
Sbjct: 704  PVAGIPRRI-------------------------AATKE--------------------- 717

Query: 835  DDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHD 894
                 Y  LS +      ++    +S + V    +  T    E +D E     C +   D
Sbjct: 718  ----HYFVLSVDLQDKLASQGSSIMSSLHVFKKLTYETVLQHEFEDYEIV--ECALTLPD 771

Query: 895  KEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSL-ELLHKTQVEGIPLALCQFQ 953
             E    + VGT  G  +  +     G + ++R  E+ K + E ++KTQ  G   ++   +
Sbjct: 772  NER---VVVGT--GFNYPDRDEPDGGRLIVFRLDEQEKLVTEAVYKTQ--GAIFSVEYQE 824

Query: 954  GRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSI-NTYRDRIYVGDIQESFHFCKYR 1012
            G+LL G+  VL  +    K  LR   +   P   ++I  + +D + VGD+ +S     Y 
Sbjct: 825  GKLLVGMNAVLCTFRYENKT-LRVVGSTRTPTYCLNIAASSKDIVVVGDMMKSLTL--YN 881

Query: 1013 RDENQLYIFADDSVPRWLTAAHHID----FDTMAGADKFGNIYFVRLPQDVSDEIEEDPT 1068
             +++     A D    W+T+   +     F T A  +    ++  + PQ V  +      
Sbjct: 882  TEKDTAEEVARDFGALWVTSVQPLSETLFFCTTADGEAVTMLWDTKAPQSVERK------ 935

Query: 1069 GGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSL---GA 1125
              K++W+                + +GD+V   ++   V      ++   +M      G 
Sbjct: 936  --KLRWKSC--------------YRLGDMVNRTRRGCFVLSSPSRLVKPELMCVTVEGGI 979

Query: 1126 MLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPV------KDVIDGDLCEQF 1179
            +L   +    D    ++ +  +  PPL G D   +    FP       KD IDGDL E  
Sbjct: 980  LLIGDASQHADLLLQIQHNFLEAVPPLGGLDFYKWHERLFPARASAANKDFIDGDLLESI 1039

Query: 1180 PTLSLDLQRKI 1190
              L     +KI
Sbjct: 1040 EDLPESTLQKI 1050


>gi|115471083|ref|NP_001059140.1| Os07g0203700 [Oryza sativa Japonica Group]
 gi|113610676|dbj|BAF21054.1| Os07g0203700, partial [Oryza sativa Japonica Group]
          Length = 666

 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 145/704 (20%), Positives = 251/704 (35%), Gaps = 188/704 (26%)

Query: 600  RFLAVGSYDNTIRILSLDPDDCMQILSVQSVS------SP-----PESLLFLEVQASVGG 648
            +F  +G+++ ++ I+SL+P +  Q L+V  +S      +P     PE++ F+        
Sbjct: 25   KFAVIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPENVRFVAA------ 78

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL------------SDSRS------RFLG 690
                   A  ++ AGL+NG+L R       G               D  S      R +G
Sbjct: 79   -------ARFYILAGLRNGMLLRFESQTSKGHCFPGSFYKESSTPCDDTSLMLIAVRRIG 131

Query: 691  LRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVV 750
            + P  L  +     A ++ L  RPWL    R     + +S+    +    SS  C  G++
Sbjct: 132  ITPVVLVPLHDRANADIIVLGDRPWLLQSARHSLAYSSISFLPASHVTPVSSTDCPSGLL 191

Query: 751  SVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET------------- 797
             V+ N L +  +   G+  N     +  TPR+ +     + ++++ T             
Sbjct: 192  FVSENCLHLVEMVH-GKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSDIVQ 250

Query: 798  ---DQGALTA----EEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGY 850
                 GAL +    E  E AK  C + A +     GN   +  G  ++   P+       
Sbjct: 251  IDPSNGALLSRFKCEPGETAK--CMQIAKI-----GNDQVLIVGTSKSNGRPM------M 297

Query: 851  PKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQ 910
            P  E++                  LL L+  E+           +E G+  A        
Sbjct: 298  PNGEAESI-----------KGRLILLSLETIESP----------RESGSFTAASNLNSSH 336

Query: 911  FWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALC--QFQGRLLAGI-------- 960
                     GY           + E L    +   P  +C  Q Q  L+AG         
Sbjct: 337  AGSPFPEFVGY-----------AAEELSSNSMCSSPDEVCCNQIQPELMAGHLRSLVQHT 385

Query: 961  --GPVLRLYDLGKKRLLRKCENKLF--------PNTIVSINTYR------------DRIY 998
              G VL ++    + +L    N LF        P+ I    T R             RI 
Sbjct: 386  FNGAVLAVHPYLDRYVLAAAGNVLFVFGFLNESPHRIKKYTTSRTRFTITCLKTYASRIA 445

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD ++   F  Y  +  +L +   D   R +     +  +T   +D+ G+I  +  P+ 
Sbjct: 446  VGDCRDGVLFYSYHENLRKLELIYSDPAQRLVGDVALLSCETAVVSDRRGSISVLSCPR- 504

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKAS------------- 1105
               E+ E P                  +     F++G+   S+QK +             
Sbjct: 505  --LEVSESPE---------------KNLAVHCSFYMGETAMSIQKVAFKHWLPIDDLTEP 547

Query: 1106 LVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQE----HP---PLCGRDHM 1158
            ++      V+  T++GS+  M+  +S +      H  +   QE    HP   PL G DH 
Sbjct: 548  VLESVYNCVVASTLLGSIFVMIPLTSEE------HQMLQDVQERLSVHPLTAPLLGNDHA 601

Query: 1159 AYRSAYFP--VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGE 1200
             +R    P  V  ++DGD+  QF  L+ + Q  + + +  +PG+
Sbjct: 602  EFRRRGIPSGVPPILDGDMLVQFLELTSEQQHDVLNIV--SPGK 643


>gi|429850956|gb|ELA26181.1| DNA damage-binding protein 1 [Colletotrichum gloeosporioides Nara
           gc5]
          Length = 1409

 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 121/562 (21%), Positives = 216/562 (38%), Gaps = 80/562 (14%)

Query: 246 GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGD 305
           G++V  E  ++Y       V  +   +     +   + V+ A +  +  F   L  +YG+
Sbjct: 259 GLIVVGETLLVY-------VDTLTKTKVSAGIDNPTIFVAYAEYDVRNYF---LSDDYGN 308

Query: 306 IFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPD 365
           +  +T++ D   V+ L++ +       + +  +  G LF  S +G+  L +        D
Sbjct: 309 LQLLTIDTDGVVVTGLRVTHLGLTSRASCLVYMGDGMLFLGSHYGDSQLLKV-------D 361

Query: 366 VEASSST--LMETEEGFQPVF-FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIF 422
           V A S T  +++T     P+  F    L N              D ++ N F     +I 
Sbjct: 362 VTAGSETTQIVQTIPNIAPILDFAIMDLGN------------AGDSQVGNAFSSGQARIV 409

Query: 423 TLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLV 482
             CG     SLR +R  + + ++ V +       +++++ N +D+ D  +VVSF   T V
Sbjct: 410 AGCGVHQNGSLRSIRSSVGLEDIGVLEDLSDVRGLFSLRSNGSDK-DDTLVVSFITDTRV 468

Query: 483 LSIG--ETVEEVSD-SGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI--NEWRTP 537
                 E +EEV    G     P+L  S + +  L+QV  +    +  +G I  + W  P
Sbjct: 469 FRFDAEEGIEEVFQFQGLGLDKPTLIASTLPNGQLLQVTANSAALLDPEGGITLSTWSAP 528

Query: 538 GKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG------DVACLDIAS 591
             + IV   SN   V++++ G  L+   + +   L   E+   SG       ++C+  A+
Sbjct: 529 EGKVIVNASSNAKWVLLSIDGTTLV--SLSLLENLAAREQVLGSGVGGEGDQISCIHAAT 586

Query: 592 VPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDG 651
             +      F A GS    I I+ L   D M   +++                    +D 
Sbjct: 587 DLDNVGVVGFWATGS----ISIIDLQTLDAMHGETIKQT------------------DDS 624

Query: 652 ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVV---VGGRAAML 708
              P ++ L             V      LS  +S  LG +   L  +      G + + 
Sbjct: 625 VSVPRNIALVVSFD--------VSKDNYSLSGRKSVILGSKQSGLHILPRPDTDGISNVF 676

Query: 709 CLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGET 768
             +    L Y   GR + +  + E + Y A F S+   + +V      +R+  I+    T
Sbjct: 677 ATTEHSSLIYSSEGRIIYSAATAEDVTYIAPFDSEAFPDAIVLATDKNVRIAHIDVERRT 736

Query: 769 FNETALPLRYTPRRFVLQPKKK 790
            +   LPLR T RR    P  K
Sbjct: 737 -HVNPLPLRQTVRRVAYSPALK 757



 Score = 40.4 bits (93), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 54/299 (18%)

Query: 941  QVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLF---PNTI-VSINTYRDR 996
            +++G   +L     +L+AG+   + +YD  ++        KL    P+T  V ++   + 
Sbjct: 864  ELKGACRSLAVMGDKLVAGLSKTVVVYDYAEESSTSGSLLKLATFRPSTFPVDLDVNGNM 923

Query: 997  IYVGDIQESFHFCKY--RRDENQLYIF--ADDSVPRWLTAAHHIDFDTMAGADKFGNIYF 1052
            I V D+ +S    ++   +D N+  +   A      W TA  H++ D    AD  GN+  
Sbjct: 924  IGVADLMQSMTLIEFIPAQDGNKARLVERARHFQYIWATAVCHLEQDLWIEADAQGNLMV 983

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
            +R   +   E ++                   +ME I +FH+G+ +  ++   +V G  +
Sbjct: 984  LRRNPNAPTEHDK------------------KQMEVISEFHLGEQINKIRPLDVVSGEND 1025

Query: 1113 SV----IYGTVMGSL-----------GAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDH 1157
             +       T+ GS+             +L F  R      + +   + Q   P  G   
Sbjct: 1026 PIEPKAFLATIEGSIYVFADIKPEYQSLLLQFQER-----LAGVIKTLGQADEPGAGLSF 1080

Query: 1158 MAY-------RSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
            M++       RSA  P +  +DG+L E+F  L    Q  +   L  T   +   +EE++
Sbjct: 1081 MSWRGFRNAKRSADGPFR-FVDGELIERFLDLDAGRQEAVVQGLGPTVERMRDLVEELK 1138


>gi|299743623|ref|XP_001835883.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
 gi|298405741|gb|EAU85948.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
          Length = 1282

 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/469 (23%), Positives = 190/469 (40%), Gaps = 76/469 (16%)

Query: 384 FFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVS 443
             +P G  +L  +   +++ PI D  + ++      +I T  G     SL I+R G    
Sbjct: 445 IIKPEG-SHLHVLHSFKNIAPINDAVVVDVEGNGQNEIVTCSGGYTSGSLNIVRSGAEYH 503

Query: 444 EMAVSQLPGV--PSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGE--------TVEEVS 493
           E A   LPGV   +++WT+K N  D   ++IV S ++ TL+  I +         ++  +
Sbjct: 504 EAAT--LPGVCNVNSLWTIKSNFEDTIHSHIVASTHDRTLLFRIKDDGRNTTFTLLDSTA 561

Query: 494 DSGFLDTTPSLAVSLIGD-------------DSLMQVHPSGIRHIRED---GRINE---W 534
              F+   P++A++ +               + ++QV  + +  +  D   G  N+   W
Sbjct: 562 ARDFITDQPTVALANVRKRVSVERKSVYRDCNWVVQVTDNVVNLLEHDVVLGGFNKRASW 621

Query: 535 RTPGKRT-----IVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV--EKHEMSGDVACL 587
             P         IV    N  QVV+ALSGG L+    +  G   E+  EK+ +  +++ +
Sbjct: 622 SPPSSVAPRPVEIVAADINPTQVVLALSGGRLVVLRHNEEGTAFELVAEKNTLR-EISAV 680

Query: 588 DIASVPEGRKRSRFLAVGSY----------DNTIRILSLDPDD----------CMQILSV 627
              +       ++   VG +          D  + IL L+             C+  +S 
Sbjct: 681 SCQAADTKTPYTKVFLVGYWEQVAEADTDRDTVVEILELERRSNPGSGTPSLTCLVKVSK 740

Query: 628 QSVSSPPESLLFLEVQASVGGEDGA-------DHPASLFLNAGLQNGVLFRTVVDMVTG- 679
           + V + P SLL      S G  D           P  LF   GL +G +   VV    G 
Sbjct: 741 KYVPALPRSLLLY----SFGVPDSEPTNLKPNSQPTHLF--CGLADGSVAHFVVWKDGGL 794

Query: 680 QLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAAS 739
            ++DS+   LG  P K  + VV G+  +L + +R  +    R R   +P+  + L  A  
Sbjct: 795 NVTDSKIVPLGTTPVKFSACVVDGKRCVLAVGNRASIFSYERKRMAHSPVMLKDLNAAYP 854

Query: 740 FSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRY-TPRRFVLQP 787
            ++       +      L + +++ +G+    T +PL Y  P+R V  P
Sbjct: 855 LNTHTFPTSFILANHQGLTIGSVKEIGKISIRT-IPLGYDNPQRIVHIP 902


>gi|222628488|gb|EEE60620.1| hypothetical protein OsJ_14038 [Oryza sativa Japonica Group]
          Length = 1441

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 57/366 (15%)

Query: 872  TTCLLELQDNEAAFSICTVNFHD---KEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRF 927
            T   + +Q  E A ++  V  H+   KE+ TLLA+GTA  L      ++ A G + ++ F
Sbjct: 1097 TKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVL----GEDVAARGRVLLFSF 1152

Query: 928  VEEGKSLELL---HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP 984
             +   S  L+   +  + +G   A+   QG LL   GP + L       L         P
Sbjct: 1153 TKSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGAELTAVAFYDA-P 1211

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD--SVPRWLTAAHHIDFDTMA 1042
              +VS+N  ++ +  GDI +S +F  ++   +QL + A D  S+  + T    ID  T++
Sbjct: 1212 LHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFAT-EFLIDGSTLS 1270

Query: 1043 --GADKFGNI-YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVT 1099
               +D   N+  F   P+ V              W+  KL           +FHVG  +T
Sbjct: 1271 LVASDSDKNVQIFYYAPKMVE------------SWKGQKLLSR-------AEFHVGAHIT 1311

Query: 1100 SLQKASLVPGGGES--------VIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMHMRQEH 1149
               +  ++P  G S        +++G + G +G +      D++ F     L+  +    
Sbjct: 1312 KFLRLQMLPTQGLSSEKTNRFALLFGNLDGGIGCIAPI---DELTFRRLQSLQRKLVDAV 1368

Query: 1150 PPLCGRDHMAYRSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEIL 1202
            P +CG +  ++R  +   K       ++ID +L   +  LSLD Q  +A ++  T  +IL
Sbjct: 1369 PHVCGLNPRSFRQFHSNGKGHRPGPDNIIDFELLAHYEMLSLDEQLDVAQQIGTTRSQIL 1428

Query: 1203 KKLEEI 1208
                +I
Sbjct: 1429 SNFSDI 1434



 Score = 47.0 bits (110), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 71/340 (20%), Positives = 138/340 (40%), Gaps = 68/340 (20%)

Query: 245 SGVLVCAENFVIYKNQG------------HPDVRAVIPRRADLPAERGVLIVSAATHRQK 292
           SGVLV   N + Y +Q             HPD    I  +++   E   L  + AT    
Sbjct: 324 SGVLVICANSIHYHSQSTSCSLDLNNFSSHPDGSPEI-SKSNFQVE---LDAAKATWLSN 379

Query: 293 TLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            +  F   T+ G++  +T+ +D   V  L +       +++++  + + + F  S  G+ 
Sbjct: 380 DIVMF--STKAGEMLLLTVVYDGRVVQRLDLMKSKASVLSSAVTSIGNSFFFLGSRLGDS 437

Query: 353 ALYQFQAIGA-----------DPDVEAS----------SSTLMETEEGFQPVFFQ----P 387
            L QF    +             D+E             S +++     + + FQ    P
Sbjct: 438 LLVQFSYCASKSVLQDLTNERSADIEGDLPFSKRLKRIPSDVLQDVTSVEELSFQNIIAP 497

Query: 388 RGLKNLVRIEQV--ESLM---PIMDMRI---ANL-------FEEEAPQIFTLCGRGPRSS 432
             L++  +I  +  ++L+   P+ D      AN         ++   ++    G G   S
Sbjct: 498 NSLESAQKISYIVRDALINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGS 557

Query: 433 LRILRPGLAVSEMAVSQLPGVPSAVWTV-------KKNVNDEFDAYIVVSFNNATLVLSI 485
           L +L+  +    +   +LP     +WTV       +   ++E+ AY+++S  N T+VL  
Sbjct: 558 LSVLQQSIRPDLITEVELPSC-RGIWTVYYKSYRGQMAEDNEYHAYLIISLENRTMVLET 616

Query: 486 GETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
           G+ + EV+++   F+  +   A +L G   ++QV+  G R
Sbjct: 617 GDDLGEVTETVDYFVQASTIAAGNLFGRRRVIQVYGKGAR 656


>gi|297722899|ref|NP_001173813.1| Os04g0252200 [Oryza sativa Japonica Group]
 gi|255675253|dbj|BAH92541.1| Os04g0252200, partial [Oryza sativa Japonica Group]
          Length = 432

 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 57/366 (15%)

Query: 872  TTCLLELQDNEAAFSICTVNFHD---KEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRF 927
            T   + +Q  E A ++  V  H+   KE+ TLLA+GTA  L      ++ A G + ++ F
Sbjct: 88   TKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVL----GEDVAARGRVLLFSF 143

Query: 928  VEEGKSLELL---HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP 984
             +   S  L+   +  + +G   A+   QG LL   GP + L       L         P
Sbjct: 144  TKSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGAELTAVAFYDA-P 202

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD--SVPRWLTAAHHIDFDTMA 1042
              +VS+N  ++ +  GDI +S +F  ++   +QL + A D  S+  + T    ID  T++
Sbjct: 203  LHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFAT-EFLIDGSTLS 261

Query: 1043 --GADKFGNI-YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVT 1099
               +D   N+  F   P+ V              W+  KL           +FHVG  +T
Sbjct: 262  LVASDSDKNVQIFYYAPKMVE------------SWKGQKLLSR-------AEFHVGAHIT 302

Query: 1100 SLQKASLVPGGGES--------VIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMHMRQEH 1149
               +  ++P  G S        +++G + G +G +      D++ F     L+  +    
Sbjct: 303  KFLRLQMLPTQGLSSEKTNRFALLFGNLDGGIGCIAPI---DELTFRRLQSLQRKLVDAV 359

Query: 1150 PPLCGRDHMAYRSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEIL 1202
            P +CG +  ++R  +   K       ++ID +L   +  LSLD Q  +A ++  T  +IL
Sbjct: 360  PHVCGLNPRSFRQFHSNGKGHRPGPDNIIDFELLAHYEMLSLDEQLDVAQQIGTTRSQIL 419

Query: 1203 KKLEEI 1208
                +I
Sbjct: 420  SNFSDI 425


>gi|310796681|gb|EFQ32142.1| CPSF A subunit region [Glomerella graminicola M1.001]
          Length = 1163

 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 170/836 (20%), Positives = 308/836 (36%), Gaps = 115/836 (13%)

Query: 4   YSLTLQQPTGIIAAINGNFS-GTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIR 62
           Y   + +P+ I  A++   S   +T  +VVAR   LE+ R   +  +  L S  ++G I 
Sbjct: 3   YVAPIHRPSSIRHALSVRLSEDDETESLVVARSNRLEVWRVTPTD-MYMLGSAVVYGTIL 61

Query: 63  SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETF----GKSGCRRIVPGQ 118
            L + R   S  D + VG+D  +     + P      ++H E       +   R      
Sbjct: 62  LLQRLRPKDSNADLLFVGTDRFQYFTARWGPGTQ---RLHTEQVIEDAAEPHMRDAQSQD 118

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHK-SHTIVYSICGIDCGFD 177
              VDP GR + +   E    V  L         +    E  + S   V +   +     
Sbjct: 119 KCLVDPTGRFMAMHLWEGVMNVMRLGNRKGQFARLDGAWEQVRLSELFVKASAFVPTDTG 178

Query: 178 NPIFAAI---ELDYSEA---------DQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE 225
           NP  A +    +D  +A         D  +T  +  +  K+   YELD+           
Sbjct: 179 NPTIAFLYQSNIDKEDARLAIYRLMGDDKNTNVSRFDPSKDRE-YELDIK---------- 227

Query: 226 PVDNGANMLVTVP---------------GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIP 270
             D  A +++ VP               G      G++V  E  ++Y +        V+ 
Sbjct: 228 --DPYARIIIPVPIIEDDVKRYHKRDTTGSKAQLGGLVVVGETLLVYVDTL---TGTVVE 282

Query: 271 RRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIP 330
              D PA    + V+ A +     F   L  +YG++  +T++ +   V+ L ++      
Sbjct: 283 EGLDSPA----IFVAWAAYDHTNYF---LSDDYGNLHLLTIQTEGVVVTGLFMRMLGVTS 335

Query: 331 VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVF-FQPRG 389
             + +  +  G LF  S +G+  L           VE  ++ L++T     P+  F    
Sbjct: 336 RASCLVYMGDGMLFLGSHYGDSQLLSVS-------VETETTKLVQTIPNIAPILDFSIMD 388

Query: 390 LKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQ 449
           L N              D ++ N F     +I   CG     SLR +R  + + ++ V  
Sbjct: 389 LGN------------AGDSQVGNAFSSGQARIVAGCGVHQNGSLRSIRSSVGLEDIGVLD 436

Query: 450 LPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGET--VEEVSD-SGFLDTTPSLAV 506
                  +++++   + + D  +VVSF   T V        +EEV D  G +   P+L  
Sbjct: 437 DLRDVRGLFSLRSYGSAKVDT-LVVSFITETRVFRFDPEGGIEEVFDFQGLVLDRPTLVA 495

Query: 507 SLIGDDSLMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYF 564
           + +    L+Q+  + +  +  +    ++ W  P  +TIV   +N    ++++SG  L+  
Sbjct: 496 TTLPSGHLLQITATAVTVLDSESGVTLSTWAVPDGKTIVNASANNKWALLSISGTTLVSL 555

Query: 565 EV-DMTGQLLEVEKHEMSG---DVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDD 620
            + D      +V    + G    ++C+  A   +      F A GS    + I+ L    
Sbjct: 556 NLSDNLSAQEQVLCRPIGGQEDQISCIHAARDLDDIGVVGFWATGS----VSIIHLGTLH 611

Query: 621 CMQILSVQSVS---SPPESLLFLEVQASVGGEDGADHPASLF---LNAGLQNGVLFRTVV 674
            +Q  +V+      S P  L  +++           HP  L    L   +++G +    V
Sbjct: 612 ALQGETVKQTDDSVSVPRDLALVQL-----------HPPHLLGPTLFVAMEDGQVVSFNV 660

Query: 675 DMVTGQLSDSRSRFLGLRPPKLFSVVVGGR---AAMLCLSSRPWLGYIHRGRFLLTPLSY 731
                 LS  +S  LG +   L  +   G    + +   +    L Y    R + +  + 
Sbjct: 661 SKEDFSLSSRKSVTLGSQQAGLHILPRPGDEGISNIFATTEHSSLIYSSEARVMYSAATA 720

Query: 732 ETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQP 787
           E + Y A F S+   + +       +R+  I+    T +   L LR T RR    P
Sbjct: 721 EDVTYIAPFDSEAFPDAIFLATNRNIRIAHIDPERRT-HVNPLQLRETVRRVAYSP 775


>gi|294950477|ref|XP_002786649.1| hypothetical protein Pmar_PMAR005356 [Perkinsus marinus ATCC 50983]
 gi|239900941|gb|EER18445.1| hypothetical protein Pmar_PMAR005356 [Perkinsus marinus ATCC 50983]
          Length = 1869

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 144/338 (42%), Gaps = 70/338 (20%)

Query: 397  EQVESLMPIMDMRIANLFEEEA----------------------------PQIFTLCGRG 428
            E++ SL PI D+++ ++ + +A                            P    L GRG
Sbjct: 1017 EEMASLGPITDLKMVSMLDRQAATPATLPDDTMAVGSPNGSDNGGSRLSQPACLVLSGRG 1076

Query: 429  PRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGET 488
              S LR L  G+ + ++  + LPG  +AV+T++  V      Y+++SF + TLVL     
Sbjct: 1077 QHSHLRALAYGVGMLKLGSTPLPGRATAVFTIEDEVRTR---YMLISFVDVTLVL----- 1128

Query: 489  VEEVSDSGFLDTTPSLAVSLIGDDSL-----MQVHPSGIRHIREDGRINEWRTP-GKRTI 542
              +++ SG ++  P  A  + G  ++     +QV P+  + +   G   +W  P G R  
Sbjct: 1129 --QLTGSGVVEVPPGEAEFVTGLPTVFACQGVQVTPAECKLVPRGG---DWHPPRGCRIA 1183

Query: 543  VKVGSNRLQVVIALSGGE------LIYFEVDMTGQLLEVEKHEMSGDVACLDIA-SVPEG 595
                     +++AL  GE      ++   +D  G + EV   +   ++  +  A  +   
Sbjct: 1184 AACWDGGSLIMVALGDGEVRHRGRVVALAIDAPGLVNEVGSFDTDTEIMTVSAAHGLLAL 1243

Query: 596  RKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHP 655
              R   +AV  Y+       L      Q L+V +VSS  E++    V        G  H 
Sbjct: 1244 CTRGSKVAVYRYEEQQGATQLG----FQALTVANVSSTVETIHMNYV--------GGLH- 1290

Query: 656  ASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
             SL+L  GL NGVL +  +D   G L   R+RFLG +P
Sbjct: 1291 -SLYL--GLTNGVLMKYSMDPDLGSLGRQRARFLGPKP 1325


>gi|154332167|ref|XP_001561900.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059221|emb|CAM36920.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1959

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 113/296 (38%), Gaps = 87/296 (29%)

Query: 151 LTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQ---------------DS 195
           +++ +P+E  +  T++YS C +D   D+ +FA +E +  EA                  S
Sbjct: 315 ISLGTPIEVQR-QTVLYSACALDGYLDHAVFAVLEEEIVEARDGTATAAGEAGGGTFLKS 373

Query: 196 TGQA---ASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAE 252
            GQ      + +K+   Y     L  V R     V   A+ L+ VP    GP GVLVC +
Sbjct: 374 IGQGLEGVVQHRKHFVLYAYVPSLKQVQRTQLVHVPATAHRLIAVPAAPYGPGGVLVCTD 433

Query: 253 NFVIYKN-----------------QGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTL- 294
             +I+ +                  G        PRR D        I+   +  Q TL 
Sbjct: 434 TELIWYDVSASQQQQSSAAAANGRVGVFKCTYAFPRRLDC-----TEILYDPSIIQHTLT 488

Query: 295 -----FFFLLQTEYGDIFKVTLEH-DNEHVSE---------------------------- 320
                FF LLQ E GD+++V LE  D +   E                            
Sbjct: 489 CFGRRFFMLLQDEQGDVYRVFLEAGDVQRAYEALRTRELAQANPELFLQQQLAANGGAAP 548

Query: 321 ----------LKIKYFDTIPVTASMCVLKSGYLFAASEFGN-HALYQFQAIGADPD 365
                     L + YFDT+P +++M + + G+LF  +E G  H LY+ ++ G   D
Sbjct: 549 AAALPPVPNPLSVHYFDTLPPSSAMALFRRGFLFIGNEAGPLHGLYKIKSNGYTAD 604



 Score = 65.1 bits (157), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 17/188 (9%)

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE---DPTGGKIKWEQGKLN 1080
            DSVPR +T+   +D  T+A +D+FG + F+R+P+    +  +        ++  E+  L 
Sbjct: 1737 DSVPRHITSVVVVDERTVAASDRFGTVVFLRIPESTRTKFAQPVHQLQEAELIAEETYLR 1796

Query: 1081 GAPNKMEEIVQFHVGDVVTSL--QKASLVPGGGES-----VIYGTVMGSLGAMLAFSSRD 1133
                   E+ + HVG++VT+L  Q   L  G   +     V Y T +GSLGA +   S +
Sbjct: 1797 -TQQTFREVARHHVGELVTALHVQPQDLSQGTDTALATKIVYYSTALGSLGAYVPLLSEE 1855

Query: 1134 DVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF-----PTLSLDLQR 1188
            D    ++L+  +     PL G      R+++     V+DGD+ +          S   + 
Sbjct: 1856 DGALAAYLQPLLHSHIRPLLGPPTALPRASHLS-HHVVDGDIAQLLRGGATTPFSTAAKE 1914

Query: 1189 KIADELDR 1196
             IAD L+R
Sbjct: 1915 DIADALER 1922



 Score = 40.0 bits (92), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 26/44 (59%)

Query: 95  KNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQK 138
           K  F K+ +   G+SG R  VPG  +AVDP G A+++ A  + K
Sbjct: 195 KGRFIKVSEVCLGRSGARLTVPGARMAVDPAGTALLVTALMRTK 238


>gi|148697644|gb|EDL29591.1| cleavage and polyadenylation specific factor 1, isoform CRA_c [Mus
           musculus]
          Length = 1388

 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 133/632 (21%), Positives = 236/632 (37%), Gaps = 118/632 (18%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+   +  NF       +VVA    L + R         +N G     
Sbjct: 1   MYAVYKQAHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE 316
                +           L  + GV I +  A     +    ++  + G+I+ +TL  D  
Sbjct: 295 PYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG- 353

Query: 317 HVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAI-----------GA 362
            +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++               A
Sbjct: 354 -MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAA 412

Query: 363 DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI----------------EQVESLM--- 403
           D +   S    +E   G+      P+   + + +                E  +S++   
Sbjct: 413 DKEEPPSKKKRVEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIG 472

Query: 404 PIMDMRI---ANLFEEEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSA 456
           P  +  +   A L EE +P    +I    G G   +L +L+  +    +   +LPG    
Sbjct: 473 PCANAAVGEPAFLSEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC-YD 531

Query: 457 VWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGETVEEV 492
           +WTV   V  E +                         ++++S  ++T++L  G+ + E+
Sbjct: 532 MWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTGQEIMEL 591

Query: 493 SDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
             SGF    P++    IGD+  ++QV P GIR
Sbjct: 592 DTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 623


>gi|449295711|gb|EMC91732.1| hypothetical protein BAUCODRAFT_116696 [Baudoinia compniacensis
           UAMH 10762]
          Length = 1148

 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 164/815 (20%), Positives = 307/815 (37%), Gaps = 146/815 (17%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELL--RPENSGRIETLVSTEIFGAI 61
           Y   + +P+ +  AIN +F    + +++VA+   LE+    P    ++    +  ++G +
Sbjct: 3   YLAPIHRPSSVRHAINLSFLSPTSSDLIVAKANRLEIYSPNPHQPDQLSLQYTRSLYGKV 62

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPS-KNVFDKIHQETFGKSGCRRIVPGQYL 120
             L + R   SQ D++ VG+D      L ++ S K +  +       +   R    G  +
Sbjct: 63  TLLHKLRPATSQTDHLFVGTDHYHYFTLSWDASTKQLRTEKSYVDIAEKSARDSQTGDRV 122

Query: 121 AVDPKGRAVMIGACEKQKLVYVL-------NRDTAARLTI---SSPLEAHKSHTIVYSIC 170
            +DP  R + +   E   ++ VL        +  AA   I     P+        V S C
Sbjct: 123 HIDPTSRFLSLECYEG--VINVLPIAHAGKGKRKAADNEIGELQDPIPVRIPELFVRSTC 180

Query: 171 GID-----CGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE 225
            +          NP  A +        +DST +        L   EL+   +   R   E
Sbjct: 181 FVHKRQAGSKLANPELAVLW-------EDSTNKV------RLKVRELEFTPSL--RPAEE 225

Query: 226 P--------------VDNGANMLVTVPGGGDGPS--GVLVCAENFVIYKNQGHPDVRAVI 269
           P              ++ GA+ L+ +P     P   G+LV  E  + Y ++    +    
Sbjct: 226 PPTAELEKGKDAQGEIELGASHLIPLP-----PPMYGMLVVGETRIAYVDEWEYRITDTQ 280

Query: 270 PRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKV-TLEHDNEHVSELKIKYFDT 328
           P       E  + +   A   Q+    ++L  +YG ++ +  L+++    +  ++     
Sbjct: 281 PLD-----EATIFVAWCAVDEQR----YVLADDYGKLYLLFVLQNNTGEYAGHRLDILGQ 331

Query: 329 IPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR 388
                ++  L +G +F  S  G+  + Q             S   ME  + F        
Sbjct: 332 TSRANTLVYLDAGRIFVGSHQGDSQVIQI------------SEQSMEVVQTFA------- 372

Query: 389 GLKNLVRIEQVESLMPIMDMRI-----------ANLFEEEAPQIFTLCGRGPRSSLRILR 437
                       ++ PI+D  I            N F     +I T  G     SLR +R
Sbjct: 373 ------------NIAPILDFTIMDMGNRSSDAPVNEFSSGQARIVTGSGAYKDGSLRSVR 420

Query: 438 PGLAVSEMAVSQLPGVP-SAVWTVKKNVNDEFDAYIVVSFNNATLVL--SIGETVEEVSD 494
            G+ + ++      G P SA+++++ +    F   +VV F + T V    +   VEEV  
Sbjct: 421 SGVGLEDVGSIGEMGAPVSAMFSLRSSPESHFVDTLVVGFVSYTRVFRFDVDGEVEEVDH 480

Query: 495 -SGFLDTTPSLAVSLIGDDSLMQVHPSGI--RHIREDGRINEWRTPGKRTIVKVGSNRLQ 551
             GF     SL      D  ++QV  S +   H       + W  P  R+I  V +    
Sbjct: 481 LGGFELAAASLYAGNTSDGRIVQVTGSAVIVSHTETRTITSSWSLPDGRSITAVAAEGDS 540

Query: 552 VVIALSGGELIYFEV-DMTGQLLEVEKH---EMSGDVACLDIASVPEGRKRSRFLAVGSY 607
           +++++ G EL+  ++ +++ + LE       E    V+C+ ++      K  R + V  +
Sbjct: 541 LLVSIGGAELVVLDLSNVSSERLEARTRRTFESEEQVSCIALS------KAVRDVCVVGF 594

Query: 608 DNTIRILSLDPDDCMQILSVQSV------SSPPESLLFLEVQASVGGEDGADHPASLFLN 661
               R+  L   D +Q ++ + V      S+ P S++   +          D P +LF+ 
Sbjct: 595 WQESRVAFLSLHD-LQPIATERVADSFDTSAVPRSVVLANIL--------QDAPPTLFV- 644

Query: 662 AGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAM---LCLSSRPWLGY 718
            GL +G +    V       +  +S  LG +    F+++  G   +         P L Y
Sbjct: 645 -GLADGNVVTYTVQSPQQPFTSRKSTILGTQQAN-FTLLPRGDGVLDNVFATCEHPSLIY 702

Query: 719 IHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVA 753
              GR + + ++ ET +   SF S +   G +++A
Sbjct: 703 GQEGRTVYSAVTAETAQSICSFDS-EAYSGAIAIA 736


>gi|449542041|gb|EMD33022.1| hypothetical protein CERSUDRAFT_99035 [Ceriporiopsis subvermispora B]
          Length = 302

 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 42/218 (19%)

Query: 869  SANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV 928
            +A T  +  L +NE AFS+    F  +     LAV T +      +  + A         
Sbjct: 24   NAQTAKVTHLDNNEMAFSLVVAPFAARGGELHLAVDTLRTSSSHHRHALAA--------- 74

Query: 929  EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIV 988
                        +     LA+   QG+L+ G+G  L +YD+GKK LLRK ENK FP  + 
Sbjct: 75   ------------ETNDGSLAVMALQGKLVVGVGQPLYIYDMGKK-LLRKVENKTFPAALY 121

Query: 989  SINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
            ++                 +  Y+  EN L +F + + PR + A   I  +  A A  FG
Sbjct: 122  AL-----------------YADYKAPENHLLVFVEGTQPREIAAMTMISHNPGAAAGHFG 164

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKM 1086
            N +   L   V +++     G + K   G+L+ A  ++
Sbjct: 165  NAFASPLYPKVPEQVA---AGEQAKCRAGELDRAAGEL 199


>gi|197245729|gb|AAI68713.1| Cpsf1 protein [Rattus norvegicus]
          Length = 1439

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 133/637 (20%), Positives = 241/637 (37%), Gaps = 128/637 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+  A+  NF       +VVA    L + R         +N G     
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 353

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +S+
Sbjct: 354 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PASS 407

Query: 373 LMETEEGFQPVFFQPR--------GLKNLVRIEQVE------------------------ 400
           + E  +  +P   + R        G K    ++++E                        
Sbjct: 408 VREAADKEEPPSKKKRVDPTVGWTGGKTQDEVDEIEVYGSEAQSGTQLATYSFEVCDSML 467

Query: 401 SLMPIMDMRI---ANLFEE--EAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLP 451
           ++ P  +  +   A L EE   +P    +I    G G   +L +L+  +    +   +LP
Sbjct: 468 NIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELP 527

Query: 452 GVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGE 487
           G    +WTV   V  E +                         ++++S  ++T++L  G+
Sbjct: 528 GC-YDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTGQ 586

Query: 488 TVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
            + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 587 EIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 623


>gi|75145059|sp|Q7XWP1.2|CPSF1_ORYSJ RecName: Full=Probable cleavage and polyadenylation specificity
            factor subunit 1; AltName: Full=Cleavage and
            polyadenylation specificity factor 160 kDa subunit;
            Short=CPSF 160 kDa subunit
 gi|38345987|emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group]
          Length = 1441

 Score = 71.2 bits (173), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 57/366 (15%)

Query: 872  TTCLLELQDNEAAFSICTVNFHD---KEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRF 927
            T   + +Q  E A ++  V  H+   KE+ TLLA+GTA  L      ++ A G + ++ F
Sbjct: 1097 TKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVL----GEDVAARGRVLLFSF 1152

Query: 928  VEEGKSLELL---HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP 984
             +   S  L+   +  + +G   A+   QG LL   GP + L       L         P
Sbjct: 1153 TKSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGAELTAVAFYDA-P 1211

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD--SVPRWLTAAHHIDFDTMA 1042
              +VS+N  ++ +  GDI +S +F  ++   +QL + A D  S+  + T    ID  T++
Sbjct: 1212 LHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFAT-EFLIDGSTLS 1270

Query: 1043 --GADKFGNI-YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVT 1099
               +D   N+  F   P+ V              W+  KL           +FHVG  +T
Sbjct: 1271 LVASDSDKNVQIFYYAPKMVE------------SWKGQKLLSR-------AEFHVGAHIT 1311

Query: 1100 SLQKASLVPGGGES--------VIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMHMRQEH 1149
               +  ++P  G S        +++G + G +G +      D++ F     L+  +    
Sbjct: 1312 KFLRLQMLPTQGLSSEKTNRFALLFGNLDGGIGCIAPI---DELTFRRLQSLQRKLVDAV 1368

Query: 1150 PPLCGRDHMAYRSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEIL 1202
            P +CG +  ++R  +   K       ++ID +L   +  LSLD Q  +A ++  T  +IL
Sbjct: 1369 PHVCGLNPRSFRQFHSNGKGHRPGPDNIIDFELLCSYEMLSLDEQLDVAQQIGTTRSQIL 1428

Query: 1203 KKLEEI 1208
                +I
Sbjct: 1429 SNFSDI 1434



 Score = 47.4 bits (111), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 71/340 (20%), Positives = 138/340 (40%), Gaps = 68/340 (20%)

Query: 245 SGVLVCAENFVIYKNQG------------HPDVRAVIPRRADLPAERGVLIVSAATHRQK 292
           SGVLV   N + Y +Q             HPD    I  +++   E   L  + AT    
Sbjct: 324 SGVLVICANSIHYHSQSTSCSLDLNNFSSHPDGSPEI-SKSNFQVE---LDAAKATWLSN 379

Query: 293 TLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            +  F   T+ G++  +T+ +D   V  L +       +++++  + + + F  S  G+ 
Sbjct: 380 DIVMF--STKAGEMLLLTVVYDGRVVQRLDLMKSKASVLSSAVTSIGNSFFFLGSRLGDS 437

Query: 353 ALYQFQAIGA-----------DPDVEAS----------SSTLMETEEGFQPVFFQ----P 387
            L QF    +             D+E             S +++     + + FQ    P
Sbjct: 438 LLVQFSYCASKSVLQDLTNERSADIEGDLPFSKRLKRIPSDVLQDVTSVEELSFQNIIAP 497

Query: 388 RGLKNLVRIEQV--ESLM---PIMDMRI---ANL-------FEEEAPQIFTLCGRGPRSS 432
             L++  +I  +  ++L+   P+ D      AN         ++   ++    G G   S
Sbjct: 498 NSLESAQKISYIVRDALINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGS 557

Query: 433 LRILRPGLAVSEMAVSQLPGVPSAVWTV-------KKNVNDEFDAYIVVSFNNATLVLSI 485
           L +L+  +    +   +LP     +WTV       +   ++E+ AY+++S  N T+VL  
Sbjct: 558 LSVLQQSIRPDLITEVELPSC-RGIWTVYYKSYRGQMAEDNEYHAYLIISLENRTMVLET 616

Query: 486 GETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
           G+ + EV+++   F+  +   A +L G   ++QV+  G R
Sbjct: 617 GDDLGEVTETVDYFVQASTIAAGNLFGRRRVIQVYGKGAR 656


>gi|302503607|ref|XP_003013763.1| hypothetical protein ARB_07875 [Arthroderma benhamiae CBS 112371]
 gi|291177329|gb|EFE33123.1| hypothetical protein ARB_07875 [Arthroderma benhamiae CBS 112371]
          Length = 1148

 Score = 71.2 bits (173), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 221/1031 (21%), Positives = 393/1031 (38%), Gaps = 174/1031 (16%)

Query: 224  SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLI 283
            S+ VD GA++L+ VP       G+L+  E+ + Y +    +    I R     AE  V +
Sbjct: 244  SDEVDLGASILIPVP---RPLGGLLIIGESSIKYVDVSRNET---ISRPL---AESTVFV 294

Query: 284  VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKSGY 342
                   Q+    +LL  +YG +F + L  D ++ V   K+ +       + +  L  G 
Sbjct: 295  AWEQVDGQR----WLLADDYGRLFFLMLVLDADNAVDTWKVDFLGVTSRASVLVYLDGGI 350

Query: 343  LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            +F  S  G+  + Q +                  E GF  V             + + ++
Sbjct: 351  VFVGSHQGDSQVIQIK------------------EGGFDLV-------------QTISNI 379

Query: 403  MPIMDMRIANL---------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
             PI+D  + ++         F     +I T  G     SLR +R G+ + E+ V      
Sbjct: 380  APILDFTVMDMGDRSGATREFSSGQTRIVTGSGAFGDGSLRSVRSGVGIEELGVLASMEH 439

Query: 454  PSAVWTVKKNVNDEFDAYIVVSFNNATLVL--SIGETVEEVSDS--GFLDTTPSLAVSLI 509
             + +WT++    + F   ++VSF N T V   S    VEE  D   G + +  +L  + I
Sbjct: 440  ITDLWTLRSACPEPFFDTLLVSFVNETRVFHFSADGDVEEKEDGFLGLVFSQSTLLATNI 499

Query: 510  GDDSLMQVHPSGIRHIREDGRINEWRTPGKR-TIVKVGSNRLQVVIALSGGELIYFEVDM 568
              + ++QV  S  R I  D  +  WR+  +  TI    +N   +V+ L G  L+   +  
Sbjct: 500  PGNRILQVTESTSRAIDVDSGMIIWRSSYEEFTITSASANDDYLVLVLGGVRLVCISLS- 558

Query: 569  TGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQ 628
            T +L+     E    V+ + I + P        +        I IL+L P+  +++ + Q
Sbjct: 559  TFELVGSRDFEADNQVSGMTIPASPT----QACIVCLPQSAEIIILNL-PE--LEVKNKQ 611

Query: 629  SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRF 688
            ++  P E++     ++ +  E   + P +LF++  + +G +F    D+    + +S    
Sbjct: 612  ALGEPGEAI----PRSVIVAEILPNKPPTLFVS--MADGTVFSFSFDVHAFAIFNSSKIT 665

Query: 689  LGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVE 747
            LG   P    +  G G+  +      P L +   GR + + +   +     S ++ Q   
Sbjct: 666  LGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEGRIVYSAVDSASASRICSLNT-QAYP 724

Query: 748  GVVSVAG-NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEE 806
            G ++++  N L++  ++    T   T LP+  + RR    P +K           L   +
Sbjct: 725  GSIALSSQNELKIAIVDEERTTQIHT-LPMHASVRRLAYSPMEKAF--------GLGTVK 775

Query: 807  REAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLD 866
            R+ +            NG   +       DE  + PLS           D+ V C+    
Sbjct: 776  RKIS------------NGVEEVSSSFVLADEILFRPLSTYDL-----RPDELVECV---- 814

Query: 867  PRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPK--RNIVAGYIHI 924
                     L    +E   SI            L  VGTA    F      + + G I I
Sbjct: 815  -----IRSQLNYGKDEVGNSISK---------DLFFVGTA----FLDDVGDDHIRGRILI 856

Query: 925  YRFVEEGKSLELLHKTQVEGIPLALCQFQGRLL-AGIGPVLRLYDLGKKR----LLRKCE 979
            +  V   + L L+ +  + G    L      LL AG+   + ++ L + R    LL K  
Sbjct: 857  FE-VNRSRELSLIVEKSLMGACRTLAVMDHTLLVAGLVKSVSVFKLARDRFGNILLEKHT 915

Query: 980  NKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPR-----WLTAAH 1034
                    + I+   D + V D+ +S    +Y + E        + V R     W TA  
Sbjct: 916  AYRTSTAPIDISVVGDTVAVADVMKSMSLVQYTQAEEGEQEPKFEEVARHYQTLWSTAVA 975

Query: 1035 HIDFDTMAGADKFGNIYFVRLPQDVSDEIEED-----PTGGKIKWEQGKLNGAPNKMEEI 1089
             I+ +    AD  GN+  V L Q+++   E D     PT       + +L    N++  I
Sbjct: 976  PIEENVYLLADAEGNL--VVLQQNITGVTESDRKRLQPTS------EIRLGEMVNRIHPI 1027

Query: 1090 -VQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ- 1147
             VQ H    V++            +++   V GS+  +    +   +D    L+  M   
Sbjct: 1028 VVQTHTETAVSA-----------RALLATQVDGSI-YLFGLINPAYIDLLLRLQTAMGSI 1075

Query: 1148 -----EHP-PLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR---TP 1198
                 E P P         R +  P +  +DG+L E+F + +  +Q +I   LD    T 
Sbjct: 1076 TISPGEIPFPKYRAFRTTVRQSDEPFR-FVDGELIERFLSCTPAMQEEIVGRLDDSTVTV 1134

Query: 1199 GEILKKLEEIR 1209
              + + +EE+R
Sbjct: 1135 SSLKEMIEELR 1145


>gi|361067441|gb|AEW08032.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|361067443|gb|AEW08033.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171111|gb|AFG68840.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171112|gb|AFG68841.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171113|gb|AFG68842.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171114|gb|AFG68843.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171116|gb|AFG68844.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171118|gb|AFG68845.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171119|gb|AFG68846.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171120|gb|AFG68847.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171121|gb|AFG68848.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171122|gb|AFG68849.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171123|gb|AFG68850.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171124|gb|AFG68851.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171126|gb|AFG68852.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171127|gb|AFG68853.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171128|gb|AFG68854.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171129|gb|AFG68855.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
 gi|383171130|gb|AFG68856.1| Pinus taeda anonymous locus 0_17329_01 genomic sequence
          Length = 38

 Score = 70.9 bits (172), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/38 (84%), Positives = 36/38 (94%)

Query: 1176 CEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNKIV 1213
            CEQFPTL  DLQRKIA+ELDR+PGEILKKLE+IRNKI+
Sbjct: 1    CEQFPTLPPDLQRKIAEELDRSPGEILKKLEDIRNKII 38


>gi|449540702|gb|EMD31691.1| hypothetical protein CERSUDRAFT_109269 [Ceriporiopsis subvermispora
           B]
          Length = 1265

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 182/442 (41%), Gaps = 52/442 (11%)

Query: 396 IEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMA-VSQLPGVP 454
           ++  +++ PIMD  +A+L +    QI T  G     +L+++R G    E+A V+ + G+ 
Sbjct: 457 LDTFQNMAPIMDAVLADLDDSGQSQIITCSGGRNSGALKVVRAGADFQELARVNGITGIT 516

Query: 455 SAVWTVKKNVNDEFDAYIVVSFNNATLVLSI--GETVEEVSDSG--FLDTTPSLAVSLIG 510
           S +W V+       D+++V S    T V      + + ++  S   F+ T P+LAV+ I 
Sbjct: 517 S-LWPVRSRSEHSTDSHLVASTETETYVFKFDSSDVITQLDSSADEFITTAPTLAVANIP 575

Query: 511 ----------------DDSL-MQVHPSGIRHIREDGR------INEWRTP-------GKR 540
                           D SL +QV P  I  +           + E   P       G+R
Sbjct: 576 RRVSTNASGRVSSSYVDSSLVIQVTPEKITLLEYGAALGLFSLVGEGWDPKSQGAIGGRR 635

Query: 541 TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDV-ACLDIAS---VPEGR 596
            IV    N  Q+V+ L GG++    +    +       + +  V   LD+++   VP  R
Sbjct: 636 RIVAADVNASQIVVGLDGGKVCLLNLADNSRFQVQRSRDFADPVYGPLDVSAVSCVPFDR 695

Query: 597 KR--SRFLAVGSY-DNTIRILSLDPDDCM--QILSVQSVSSPPESLLFLEVQASVGGEDG 651
            +  +  +AV  +  N ++ILS+   D     +  V  + S P S+L          ++ 
Sbjct: 696 TKNFATNIAVAFWGTNKVQILSMSSQDATLATVCEVSGLPSLPRSVLLHNFGTGRTKKEP 755

Query: 652 ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
             HP  L    GL +G +      +V  +L + +   LG+ P  L    V  +  +  + 
Sbjct: 756 DYHPHVL---VGLVDGSVIS--FKVVENELKEKKVFSLGIAPVSLSRCEVDDKITVFAVG 810

Query: 712 SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
           SR  + Y  + R   +P+  + +   AS ++      +V  A + L + TI R  +    
Sbjct: 811 SRTSVLYWDKQRLTNSPVMIKDMTVGASLNTSYFRSSLVLAASSGLIIGTI-RGVDKMQI 869

Query: 772 TALPLRYT-PRRFVLQPKKKLM 792
            ++P   T PR      + KL 
Sbjct: 870 RSIPFGLTNPRWITYHSRLKLF 891


>gi|449524573|ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like, partial [Cucumis sativus]
          Length = 741

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 123/577 (21%), Positives = 224/577 (38%), Gaps = 101/577 (17%)

Query: 675  DMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTP-LSYET 733
            DM  G LS         R   +F  + G +   LC  SRP    + R R  + P L    
Sbjct: 216  DMPNGTLS---------RRLSIFKNISGYQGLFLC-GSRPAWFMVFRERLRVHPQLCDGP 265

Query: 734  LEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE------TALPLRYTPRRFVLQP 787
            +   A   +  C  G++ V      V  I +L  T N         +PL+ TP +     
Sbjct: 266  IVAFAVLHNVNCNHGLIYVTSQG--VLKICQLPSTSNYDNYWPVQKVPLKGTPHQVTYFH 323

Query: 788  KKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQ 847
            +K L  +I +    +     +       +  G  EN N + D+++             + 
Sbjct: 324  EKNLYPVIIS--APVQKPLNQVLSSMVDQDVGHVENHNLSADELQ-------------QT 368

Query: 848  YGYPKAESDKWVSCIRVLDPRSA----NTTCLLELQDNEAAFSICTV---NFHDKEHGTL 900
            Y   + E       IR+L+P  +     T   + +  +E A +I  V   N   KE+ TL
Sbjct: 369  YSVEEFE-------IRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETL 421

Query: 901  LAVGTAKGLQFWPKRNIVA-GYIHIYRFVEEGKSLELL----HKTQVEGIPLALCQFQGR 955
            LAVGTA    +    ++ A G + ++   ++  + + L    +  +++G   AL   QG 
Sbjct: 422  LAVGTA----YVQGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGH 477

Query: 956  LLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDE 1015
            LL   GP + L+      L       + P  +VS+N  ++ I +GDI +S +F  ++   
Sbjct: 478  LLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQG 537

Query: 1016 NQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWE 1075
             QL + A D                    D +   + +     +S  + +D    +I + 
Sbjct: 538  AQLSLLAKD----------------FGSLDCYATEFLID-GSTLSLTVSDDQKNIQIFYY 580

Query: 1076 QGKLNGA--PNKMEEIVQFHVGDVVTSLQKASLVPGGGE-------------SVIYGTVM 1120
              K   +    K+    +FHVG  VT   +  ++    +             ++++GT+ 
Sbjct: 581  APKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSSDKACSTVSDKTNRFALLFGTLD 640

Query: 1121 GSLGAMLAFSSRDDVDF--FSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK-------DVI 1171
            GS+G +      D++ F     L+  +    P + G +  ++R  +   K        ++
Sbjct: 641  GSIGCIAPL---DELTFRRLQSLQKKLGDAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIV 697

Query: 1172 DGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            D +L   +  L L+ Q  IA ++  T  +IL  L ++
Sbjct: 698  DCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLNDL 734


>gi|255956643|ref|XP_002569074.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590785|emb|CAP96985.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1140

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 124/594 (20%), Positives = 235/594 (39%), Gaps = 58/594 (9%)

Query: 222 KWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGV 281
           ++ + +D G++ L+ +P       G++V  E  + Y +    DV   I R  D   E  V
Sbjct: 236 EFGQELDLGSSHLIPIPAP---LGGLIVLGETSIKYIDDNANDV---ITRNLD---EATV 286

Query: 282 LIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIPVTASMCVLKS 340
            +       Q+    +LL  +YG +F ++   +N   + + K++Y       + +  L  
Sbjct: 287 FVAWEKVDSQR----WLLADDYGRLFFLSFILNNMGEIDDWKLEYLGKTSRASVLVYLGG 342

Query: 341 GYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVF-FQPRGLKNLVRIEQV 399
           G LF  S  G+  + +         ++ SS  +++T     P+  F    L N     Q 
Sbjct: 343 GMLFVGSHHGDSQVLR---------LDGSSFEVIQTLSNIAPILDFTIMDLGNRTSESQT 393

Query: 400 ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
                         F     +I T  G     +LR +R G+ + E+ V       +  W 
Sbjct: 394 HE------------FSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEMEHITDFWG 441

Query: 460 VKKNVNDEFDAYIVVSFNNATLVL--SIGETVEEVSDS-GFLDTTPSLAVSLIGDDSLMQ 516
           ++    D+F   ++V+F + T V   S    VEE+ +  G   T  +L V+ +  D ++Q
Sbjct: 442 LQTRSKDDFLNTLIVTFVDETRVFQFSTDGEVEELDNFLGLSLTECTLLVTRLQGDRILQ 501

Query: 517 VHPSGIRHIR-EDGRIN-EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLE 574
           V    +     E G +  EW    ++ I    +N   +V+ +SG  +  F++    Q++ 
Sbjct: 502 VTEQRVLVADLESGMVTFEWAPQDQKLITAASANEDHLVLVISGQIVASFDIRDNVQIIT 561

Query: 575 VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSV-SSP 633
            +       ++ L + S P G     F+A       + I+++     +Q  S+     S 
Sbjct: 562 QKDLGADQQISGLTVPSSPTG----VFIAGFPQSAKVSIMAIKDFAILQTKSLGPTGESF 617

Query: 634 PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRP 693
           P S+L  EV A         HP +LF++  + +G +    ++     LS+     LG   
Sbjct: 618 PRSVLVAEVLAD-------SHP-TLFIS--MADGCVITFSLNPQDYSLSEMNKLILGSEQ 667

Query: 694 PKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSV 752
           P    +  G G   +      P L Y   GR + + ++ E        +++   + +   
Sbjct: 668 PTFKKLPKGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHLNAEAFPDSIAVA 727

Query: 753 AGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEE 806
               L++  +++   T  +T LP+  T RR    P +K   I   D+  +   E
Sbjct: 728 TEKELKIALVDKERTTQIQT-LPMGSTVRRVAYSPSEKAFGIGTIDRKLVNGAE 780


>gi|384080885|dbj|BAM11105.1| damage-specific DNA binding protein 1, 127kDa, partial
            [Siebenrockiella crassicollis]
          Length = 364

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 35/251 (13%)

Query: 881  NEAAFSICTVNFHDKEHGTLLAVGTAKGL--QFWPKRNIVAGYIHIYRFVEEGKSLELLH 938
            NE A S+ +     K+  T   VGTA     +  PK+    G I ++ +  +GK L+ L 
Sbjct: 139  NEYALSLVSCKL-GKDPNTYFIVGTAMVYPEEAEPKQ----GRIVVFHY-SDGK-LQSLA 191

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            + +V+G   ++ +F G+LLA I   +RLY+   ++ LR   N       + + T  D I 
Sbjct: 192  EKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYVKTKGDFIL 251

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+  S     Y+  E      A D  P W++A   +D D   GA+   N++  +  +D
Sbjct: 252  VGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ--KD 309

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGG-GE----- 1112
             +   +E+                   ++E+  FH+G+ V      SLV    GE     
Sbjct: 310  SAATTDEE----------------RQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPT 353

Query: 1113 --SVIYGTVMG 1121
              SV++GTV G
Sbjct: 354  QDSVLFGTVNG 364


>gi|297815870|ref|XP_002875818.1| hypothetical protein ARALYDRAFT_323319 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321656|gb|EFH52077.1| hypothetical protein ARALYDRAFT_323319 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 987

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 116/541 (21%), Positives = 213/541 (39%), Gaps = 67/541 (12%)

Query: 316 EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAI-GADPDVEASSSTLM 374
           E +S L  K    I V +S+  L+   +F  S + +  L +   + G   +    +  ++
Sbjct: 238 ERLSGLTFKPLGKISVPSSITYLRDDIVFVGSRYADSQLVKMHQLHGPSLNTNTPALQVL 297

Query: 375 ETEEGFQPVF-----FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGP 429
            T     PV       +P G++ LV                              CG   
Sbjct: 298 TTYTNSGPVIDFSLCNKPIGVRKLV----------------------------MCCGTHE 329

Query: 430 RSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN-VNDEFDAYIVVSFNNA-TLVLSIGE 487
            SSL  +  G+ +S    +++P +   +W++K + +ND     ++     A  LV +I +
Sbjct: 330 DSSLEGVSTGVGISVKFFAEIPNI-QRIWSLKSSSLNDNHPFLVLQPIAVAPALVFTIDD 388

Query: 488 TVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI--NEWRTPGKRTIV 543
           T   +S +  GF   + ++      D   +QV    +R I     +  +EW    K  I+
Sbjct: 389 TGAFMSHTMVGFAYDSVTICCHDAADRLFIQVTEKSVRLIDSKTGVLRSEWLASSK--IL 446

Query: 544 KVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLA 603
              +   QV++A    +L+Y  +D+   +L   K +   DV+CLDI  V      S+  A
Sbjct: 447 FASATIKQVLLATLDKQLVY--LDIRNGILVQAKVQKGYDVSCLDIGPVGSNTTYSKLAA 504

Query: 604 VGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAG 663
           VG ++ +I +L L P+  +++L+V+ V +     + L     V            +L   
Sbjct: 505 VGLWEKSILVLKL-PE--LEVLTVEHVHAHVPRCILLCAFEQVS-----------YLLCA 550

Query: 664 LQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA-AMLCLSSRPWLGYIHRG 722
           L +G L    ++   GQL +  ++ L   P  L + +  G   A    S  P L +  + 
Sbjct: 551 LADGSLLTFKLNEDDGQLQEKNTKELEGYPKTLRTFISNGSVRACFSTSKVPTLIFTMKQ 610

Query: 723 RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRR 782
           +     L+   +E    F      EG+  V  + + + T   +G+      +P+    RR
Sbjct: 611 KLQYNRLNLTDIEDMCPFQRADISEGLAIVTKDGVVICT---MGDMETNIKIPMFSYGRR 667

Query: 783 FVLQPKKK-LMVIIETDQG--ALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENK 839
              Q + +   V++E   G  +L   ++E      FE     E+G   +     GDD+  
Sbjct: 668 LCHQEESQTYAVLVEEKDGRHSLQLLDKELNTLFSFE-LNEHEHGLSIVSCSFAGDDQAY 726

Query: 840 Y 840
           Y
Sbjct: 727 Y 727



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 25/146 (17%)

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE------SVIYGTVMGSLGAMLAFSSRD 1133
            +G PN    + Q+++G  +T ++  +L     E      SV++ TV G++G +++     
Sbjct: 848  HGYPNT---VGQWYLGQSITHMKAGTLSRLSDEDSAIVPSVMFSTVSGAVGMIVSLPPVI 904

Query: 1134 DVDFFSHLEMHMRQE----------HPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLS 1183
              +F   LE +MR++           P +C        S  F     +DGD  E F  L 
Sbjct: 905  -YEFLHKLEQYMREQIRGIGCPNEDFPRMCVELQSLSESTEF-----LDGDFIESFQILD 958

Query: 1184 LDLQRKIADELDRTPGEILKKLEEIR 1209
            +D Q ++A+E++ T  +I K +E ++
Sbjct: 959  IDDQEEVAEEMEVTVEDIRKIVEYLK 984


>gi|354491122|ref|XP_003507705.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform 1 [Cricetulus griseus]
          Length = 1441

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 134/639 (20%), Positives = 244/639 (38%), Gaps = 130/639 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+  A+  NF       +VVA    L + R         +N G     
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNNERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFGKSGCR----RIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F +S  R    + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEESELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 353

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +S+
Sbjct: 354 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PASS 407

Query: 373 LMETEEGFQPVFFQPR--------GLKNLVR--IEQVE---------------------- 400
           + E  +  +P   + R        G K + +  ++++E                      
Sbjct: 408 VREAADKEEPPSKKKRVDPTAGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDS 467

Query: 401 --SLMPIMDMRI---ANLFEE--EAPQ----IFTLCGRGPRSSLRILRPGLAVSEMAVSQ 449
             ++ P  +  +   A L EE   +P+    I    G G   +L +L+  +    +   +
Sbjct: 468 MLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFE 527

Query: 450 LPGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSI 485
           LPG    +WTV   V  E +                         ++++S  ++T++L  
Sbjct: 528 LPGC-YDMWTVIAPVRKEEEEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTMILQT 586

Query: 486 GETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           G+ + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 587 GQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 625


>gi|388853409|emb|CCF53029.1| related to UV-damaged DNA-binding protein [Ustilago hordei]
          Length = 1508

 Score = 70.1 bits (170), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 181/391 (46%), Gaps = 60/391 (15%)

Query: 392  NLVRIEQVESLMPIMDMRI-------ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSE 444
            +LV IE  ++L P++D  +                +I T  G GP  S+R +R G +V +
Sbjct: 638  SLVTIETWQNLGPVVDFTVDDGAGGDPTTSASAQARIVTCSGAGPSGSIREVRSGASVQD 697

Query: 445  MAVSQLPGVPSA--VWTVKK-NVNDEFDAYIVVSFNNATLVL------SIGETVEEVSDS 495
              VS LP +P+A  +W+V+  +   +  A +++ F  +T  L      ++ +  + +S  
Sbjct: 698  --VSSLP-IPNAQQIWSVEAGDATSKQTAGLLIGFATSTAYLHFDANGNLADATDRLSAV 754

Query: 496  GFLDTTPSLAVSLIGDDS----LMQV--HPSGIRHIREDGR--INEWRTPGKRTIVKVGS 547
            G   T P+L  S + D S    L++V    + + +++++    + +W+      I     
Sbjct: 755  GVDTTLPTLTASTVFDASQGPLLVRVAKDAASLVNLQDEAATLVQQWKPSAGLEITTASV 814

Query: 548  NRL-QVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGS 606
            N   Q+VIA S   L Y  V+  G L+E  K ++  +V+CLD +SV  G+  ++F A G 
Sbjct: 815  NPYGQLVIASSDKSLSYLVVE-EGALIERNKIQLDHEVSCLDTSSVTAGQA-AQFAACGF 872

Query: 607  YDN-TIRILSLDPDDC---MQILSVQSVSSPPESLLF-----------LEVQASVGGEDG 651
            +   +I+I +L P+       ++  Q  ++ P S+L             + ++SVG  D 
Sbjct: 873  WQTRSIQIFAL-PELAPVGESLVVQQGFAAVPRSILLHRFASKQSEASSQTKSSVGNRD- 930

Query: 652  ADHPASLFLNAGLQNGVLFRTVVDM--------VTGQLSDSRSRFLGLRPPKLFSVVVGG 703
            A  P  L    GL +G L    + +        + G LSD ++  LG +  KL ++    
Sbjct: 931  ALMPHLLI---GLGDGTLVSFSLSLPRDDSYSKIVG-LSDCKTVSLGKQALKLDAIESWA 986

Query: 704  RAAMLCLS-SRPWLGYIHRGRFLLTPLSYET 733
             A ++ +S SRP L Y    RF    L +++
Sbjct: 987  GARVVAVSGSRPTLVYADSKRFSYNALKHKS 1017


>gi|354491126|ref|XP_003507707.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform 3 [Cricetulus griseus]
          Length = 1449

 Score = 70.1 bits (170), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 134/639 (20%), Positives = 244/639 (38%), Gaps = 130/639 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+  A+  NF       +VVA    L + R         +N G     
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNNERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFGKSGCR----RIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F +S  R    + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEESELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 353

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +S+
Sbjct: 354 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PASS 407

Query: 373 LMETEEGFQPVFFQPR--------GLKNLVR--IEQVE---------------------- 400
           + E  +  +P   + R        G K + +  ++++E                      
Sbjct: 408 VREAADKEEPPSKKKRVDPTAGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDS 467

Query: 401 --SLMPIMDMRI---ANLFEE--EAPQ----IFTLCGRGPRSSLRILRPGLAVSEMAVSQ 449
             ++ P  +  +   A L EE   +P+    I    G G   +L +L+  +    +   +
Sbjct: 468 MLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFE 527

Query: 450 LPGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSI 485
           LPG    +WTV   V  E +                         ++++S  ++T++L  
Sbjct: 528 LPGC-YDMWTVIAPVRKEEEEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTMILQT 586

Query: 486 GETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           G+ + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 587 GQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 625


>gi|449470342|ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Cucumis sativus]
          Length = 1504

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 117/556 (21%), Positives = 218/556 (39%), Gaps = 92/556 (16%)

Query: 696  LFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTP-LSYETLEYAASFSSDQCVEGVVSVAG 754
            +F  + G +   LC  SRP    + R R  + P L    +   A   +  C  G++ V  
Sbjct: 991  IFKNISGYQGLFLC-GSRPAWFMVFRERLRVHPQLCDGPIVAFAVLHNVNCNHGLIYVTS 1049

Query: 755  NALRVFTIERLGETFNE------TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEERE 808
                V  I +L  T N         +PL+ TP +     +K L  +I +    +     +
Sbjct: 1050 QG--VLKICQLPSTSNYDNYWPVQKVPLKGTPHQVTYFHEKNLYPVIIS--APVQKPLNQ 1105

Query: 809  AAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPR 868
                   +  G  EN N + D+++             + Y   + E       IR+L+P 
Sbjct: 1106 VLSSMVDQDVGHVENHNLSADELQ-------------QTYSVEEFE-------IRILEPE 1145

Query: 869  SA----NTTCLLELQDNEAAFSICTV---NFHDKEHGTLLAVGTAKGLQFWPKRNIVA-G 920
             +     T   + +  +E A +I  V   N   KE+ TLLAVGTA    +    ++ A G
Sbjct: 1146 KSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTA----YVQGEDVAARG 1201

Query: 921  YIHIYRFVEEGKSLELL----HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR 976
             + ++   ++  + + L    +  +++G   AL   QG LL   GP + L+      L  
Sbjct: 1202 RVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNG 1261

Query: 977  KCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI 1036
                 + P  +VS+N  ++ I +GDI +S +F  ++    QL + A D            
Sbjct: 1262 IAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKD------------ 1309

Query: 1037 DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA--PNKMEEIVQFHV 1094
                    D +   + +     +S  + +D    +I +   K   +    K+    +FHV
Sbjct: 1310 ----FGSLDCYATEFLID-GSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHV 1364

Query: 1095 GDVVTSLQKASLVPGGGE-------------SVIYGTVMGSLGAMLAFSSRDDVDF--FS 1139
            G  VT   +  ++    +             ++++GT+ GS+G +      D++ F    
Sbjct: 1365 GAHVTKFLRLQMLSTSSDKACSTVSDKTNRFALLFGTLDGSIGCIAPL---DELTFRRLQ 1421

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIAD 1192
             L+  +    P + G +  ++R  +   K        ++D +L   +  L L+ Q  IA 
Sbjct: 1422 SLQKKLGDAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAH 1481

Query: 1193 ELDRTPGEILKKLEEI 1208
            ++  T  +IL  L ++
Sbjct: 1482 QIGTTRSQILSNLNDL 1497



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 17/120 (14%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV-KKNV-------------N 465
           ++    G G   +L ILR  +    +   +LPG    +WTV  KN              +
Sbjct: 591 ELVCCSGHGKNGALCILRQSIRPEMITEVELPGC-KGIWTVYHKNTRGSIADSSRMVPDD 649

Query: 466 DEFDAYIVVSFNNATLVLSIGETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
           DE+ AY+++S    T+VL  GE + EV++S   F+      A +L G   ++QV+ SG R
Sbjct: 650 DEYHAYLIISLEARTMVLVTGELLTEVTESVDYFVHGRTIAAGNLFGRRRVIQVYESGAR 709


>gi|443684051|gb|ELT88095.1| hypothetical protein CAPTEDRAFT_161045 [Capitella teleta]
          Length = 1410

 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 140/685 (20%), Positives = 255/685 (37%), Gaps = 109/685 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-----------------P 43
           MY  S TL  PT +  ++  NF       +V A    + + R                  
Sbjct: 1   MYALSKTLHPPTTVERSVYCNFFNNSQKNLVTAGVNQIRVYRLVAESKPVEKESHTTETK 60

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E +   E+ G + S+    L G+ +D +++  +  ++ + +Y+P  +    I  
Sbjct: 61  SAKQKLECVADYELCGNVSSIESISLVGAARDALLLCFEEAKLSLCDYDPDTDDLKTISL 120

Query: 104 ETFGKSG-----CRRIVPGQYLAVDPKGR-AVMIGACEKQKLVYVLNRDTAARLTISSPL 157
             F  +      C+R +    + VDP+GR AVM+       L+ +  R  +    I +  
Sbjct: 121 HYFEDADLENGCCQRGLHHSEVRVDPEGRCAVML--IYGTHLIVLPFRKESPSDEIDATS 178

Query: 158 EAHKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKN 206
            A KS  +   I             +D  F +  +    L   E     T + A   +  
Sbjct: 179 CASKSPIMSTYIIDLRTLDERVTNVVDIQFLHGYYEPTVLILYEPLPTWTCRVAVR-KDT 237

Query: 207 LTFYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQG 261
            +   + L L   +    WS    P D      V  P GG     V+V A N ++Y NQ 
Sbjct: 238 CSIVAISLNLQDKTHPIIWSHSNLPYDCLRTFPVPKPIGG-----VIVFAVNSLLYLNQS 292

Query: 262 HPDVRAVIPRRADL-------PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHD 314
            P     +             P E   + +  A          ++  + G+++ +TL  D
Sbjct: 293 FPPYGVSLNSLTSFNTEFLLKPQEGVRMSLDCAQAEFIDNDKLVISLKGGELYVLTLVID 352

Query: 315 N-EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQ--------------- 358
           +   V    +       +T  MC+    YLF  S  GN  L ++Q               
Sbjct: 353 SMRAVRSFHLDKAAASVLTTCMCMCGDNYLFLGSRLGNSLLLRYQEKKPEASSSSDASPG 412

Query: 359 ----------AIGA-------------DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVR 395
                     AIG              + +V    S  +E+E+  Q +F     + N+  
Sbjct: 413 EEQRKEKMTLAIGLVGSSDVSKLDDLDELEVYGRDSQAVESEDITQFMFEVCDSIINIGP 472

Query: 396 IEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPS 455
             QVE   P       +  E+   ++ T  G G   ++ IL+  +    +   +LPG  +
Sbjct: 473 CGQVEMGEPAFLSEEFSHQEDPDLELVTTSGYGKNGAISILQRQIRPQVVTTFELPGC-T 531

Query: 456 AVWTV-----KKNVNDE----FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAV 506
            VWTV     ++  +DE      A++++S  ++++VL  G+ + E+  SGF    P++  
Sbjct: 532 DVWTVLGSPDEQQGSDEKLAGSHAFLLLSRADSSMVLETGQEIMELDHSGFCTDAPTVHA 591

Query: 507 SLIGDDS-LMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE 565
           + IG+   ++QV P+ I  ++   RI          +V        V++    G+L++  
Sbjct: 592 ANIGNGRYIVQVGPNAIWLLKGVERIQHLALDVSSPVVSCSLADPHVLLLCEDGQLLHLV 651

Query: 566 VDMTG-----QLLEVEKHEMSGDVA 585
           + + G      LL  + H+ S  +A
Sbjct: 652 LSVQGDDPTLSLLTTKLHQKSKVIA 676


>gi|10257491|dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit [Arabidopsis
            thaliana]
          Length = 1448

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 162/377 (42%), Gaps = 56/377 (14%)

Query: 862  IRVLDPRSAN----TTCLLELQDNEAAFSICTV---NFHDKEHGTLLAVGTAKGLQFWPK 914
            I++L+P  +     T   + +Q +E A ++  V   N    E+ TLLAVGTA    +   
Sbjct: 1091 IQILEPERSGGPWETKAKIPMQTSEHALTVRVVTLLNASTGENETLLAVGTA----YVQG 1146

Query: 915  RNIVA-GYIHIYRFVEEGKS----LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL 969
             ++ A G + ++ F + G +    +  ++  +++G   A+   QG LL   GP + L+  
Sbjct: 1147 EDVAARGRVLLFSFGKNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW 1206

Query: 970  GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRW 1029
                L         P  +VS+N  +  I +GD+ +S +F  ++   +QL + A D     
Sbjct: 1207 NGTELNGVAFFDAPPLYVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAKDFESLD 1266

Query: 1030 LTAAHH-IDFDT--MAGADKFGNI-YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNK 1085
              A    ID  T  +A +D+  NI  F   P+ +              W+  KL      
Sbjct: 1267 CFATEFLIDGSTLSLAVSDEQKNIQVFYYAPKMIE------------SWKGLKLLSR--- 1311

Query: 1086 MEEIVQFHVGDVVTSLQKASLVPGGGESV-----IYGTVMGSLGAMLAFSSRDDVDF--F 1138
                 +FHVG  V+   +  +V  G + +     ++GT+ GS G +      D+V F   
Sbjct: 1312 ----AEFHVGAHVSKFLRLQMVSSGADKINRFALLFGTLDGSFGCIAPL---DEVTFRRL 1364

Query: 1139 SHLEMHMRQEHPPLCGRDHMAYRSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIA 1191
              L+  +    P + G + +A+R      K        ++D +L   +  L L+ Q ++A
Sbjct: 1365 QSLQKKLVDAVPHVAGLNPLAFRQFRSSGKARRSGPDSIVDCELLCHYEMLPLEEQLELA 1424

Query: 1192 DELDRTPGEILKKLEEI 1208
             ++  T   ILK L ++
Sbjct: 1425 HQIGTTRYSILKDLVDL 1441



 Score = 41.2 bits (95), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 70/345 (20%), Positives = 121/345 (35%), Gaps = 68/345 (19%)

Query: 246 GVLVCAENFVIYKNQGHPDVRAV------IPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
           GVLV   N + Y +Q      A+           +LPA    + + AA     +    LL
Sbjct: 323 GVLVLCANTIHYHSQSASCALALNNYASSADSSQELPASNFSVELDAAHGTWISNDVALL 382

Query: 300 QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            T+ G++  +TL +D   V  L +       + + +  + +   F  S  G+  L QF  
Sbjct: 383 STKSGELLLLTLIYDGRAVQRLDLSKSKASVLASDITSVGNSLFFLGSRLGDSLLVQFSC 442

Query: 360 IGA-----------DPDVEA---SSSTLMETEEGFQPVF--------------------- 384
                         D D+E     +  L  T + FQ                        
Sbjct: 443 RSGPAASLPGLRDEDEDIEGEGHQAKRLRMTSDTFQDTIGNEELSLFGSTPNNSDSAQVT 502

Query: 385 ------FQPRGLKNLVRIEQVE----SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLR 434
                 F      +LV +  V+     L    D     + ++   ++    G G   +L 
Sbjct: 503 SSVLKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALC 562

Query: 435 ILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN--------------DEFDAYIVVSFNNAT 480
           +LR  +    +   +LPG    +WTV    +              DE+ AY+++S    T
Sbjct: 563 VLRQSIRPEMITEVELPGC-KGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEART 621

Query: 481 LVLSIGETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
           +VL   + + EV++S   ++      A +L G   ++QV   G R
Sbjct: 622 MVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFEHGAR 666


>gi|30696088|ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
            [Arabidopsis thaliana]
 gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=AtCPSF160; Short=CPSF 160
            kDa subunit
 gi|332008729|gb|AED96112.1| cleavage and polyadenylation specificity factor subunit 1
            [Arabidopsis thaliana]
          Length = 1442

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 162/377 (42%), Gaps = 56/377 (14%)

Query: 862  IRVLDPRSAN----TTCLLELQDNEAAFSICTV---NFHDKEHGTLLAVGTAKGLQFWPK 914
            I++L+P  +     T   + +Q +E A ++  V   N    E+ TLLAVGTA    +   
Sbjct: 1085 IQILEPERSGGPWETKAKIPMQTSEHALTVRVVTLLNASTGENETLLAVGTA----YVQG 1140

Query: 915  RNIVA-GYIHIYRFVEEGKS----LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL 969
             ++ A G + ++ F + G +    +  ++  +++G   A+   QG LL   GP + L+  
Sbjct: 1141 EDVAARGRVLLFSFGKNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW 1200

Query: 970  GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRW 1029
                L         P  +VS+N  +  I +GD+ +S +F  ++   +QL + A D     
Sbjct: 1201 NGTELNGVAFFDAPPLYVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAKDFESLD 1260

Query: 1030 LTAAHH-IDFDT--MAGADKFGNI-YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNK 1085
              A    ID  T  +A +D+  NI  F   P+ +              W+  KL      
Sbjct: 1261 CFATEFLIDGSTLSLAVSDEQKNIQVFYYAPKMIE------------SWKGLKLLSR--- 1305

Query: 1086 MEEIVQFHVGDVVTSLQKASLVPGGGESV-----IYGTVMGSLGAMLAFSSRDDVDF--F 1138
                 +FHVG  V+   +  +V  G + +     ++GT+ GS G +      D+V F   
Sbjct: 1306 ----AEFHVGAHVSKFLRLQMVSSGADKINRFALLFGTLDGSFGCIAPL---DEVTFRRL 1358

Query: 1139 SHLEMHMRQEHPPLCGRDHMAYRSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIA 1191
              L+  +    P + G + +A+R      K        ++D +L   +  L L+ Q ++A
Sbjct: 1359 QSLQKKLVDAVPHVAGLNPLAFRQFRSSGKARRSGPDSIVDCELLCHYEMLPLEEQLELA 1418

Query: 1192 DELDRTPGEILKKLEEI 1208
             ++  T   ILK L ++
Sbjct: 1419 HQIGTTRYSILKDLVDL 1435



 Score = 43.5 bits (101), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 70/339 (20%), Positives = 121/339 (35%), Gaps = 62/339 (18%)

Query: 246 GVLVCAENFVIYKNQGHPDVRAV------IPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
           GVLV   N + Y +Q      A+           +LPA    + + AA     +    LL
Sbjct: 323 GVLVLCANTIHYHSQSASCALALNNYASSADSSQELPASNFSVELDAAHGTWISNDVALL 382

Query: 300 QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            T+ G++  +TL +D   V  L +       + + +  + +   F  S  G+  L QF  
Sbjct: 383 STKSGELLLLTLIYDGRAVQRLDLSKSKASVLASDITSVGNSLFFLGSRLGDSLLVQFSC 442

Query: 360 IGA-----------DPDVEA---SSSTLMETEEGFQPVF--------------------- 384
                         D D+E     +  L  T + FQ                        
Sbjct: 443 RSGPAASLPGLRDEDEDIEGEGHQAKRLRMTSDTFQDTIGNEELSLFGSTPNNSDSAQKS 502

Query: 385 FQPRGLKNLVRIEQVE----SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGL 440
           F      +LV +  V+     L    D     + ++   ++    G G   +L +LR  +
Sbjct: 503 FSFAVRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSI 562

Query: 441 AVSEMAVSQLPGVPSAVWTVKKNVN--------------DEFDAYIVVSFNNATLVLSIG 486
               +   +LPG    +WTV    +              DE+ AY+++S    T+VL   
Sbjct: 563 RPEMITEVELPGC-KGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLETA 621

Query: 487 ETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
           + + EV++S   ++      A +L G   ++QV   G R
Sbjct: 622 DLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFEHGAR 660


>gi|24415580|gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
            subunit [Arabidopsis thaliana]
          Length = 1442

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 162/377 (42%), Gaps = 56/377 (14%)

Query: 862  IRVLDPRSAN----TTCLLELQDNEAAFSICTV---NFHDKEHGTLLAVGTAKGLQFWPK 914
            I++L+P  +     T   + +Q +E A ++  V   N    E+ TLLAVGTA    +   
Sbjct: 1085 IQILEPERSGGPWETKAKIPMQTSEHALTVRVVTLLNASTGENETLLAVGTA----YVQG 1140

Query: 915  RNIVA-GYIHIYRFVEEGKS----LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL 969
             ++ A G + ++ F + G +    +  ++  +++G   A+   QG LL   GP + L+  
Sbjct: 1141 EDVAARGRVLLFSFGKNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW 1200

Query: 970  GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRW 1029
                L         P  +VS+N  +  I +GD+ +S +F  ++   +QL + A D     
Sbjct: 1201 NGTELNGVAFFDAPPLYVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAKDFESLD 1260

Query: 1030 LTAAHH-IDFDT--MAGADKFGNI-YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNK 1085
              A    ID  T  +A +D+  NI  F   P+ +              W+  KL      
Sbjct: 1261 CFATEFLIDGSTLSLAVSDEQKNIQVFYYAPKMIE------------SWKGLKLLSR--- 1305

Query: 1086 MEEIVQFHVGDVVTSLQKASLVPGGGESV-----IYGTVMGSLGAMLAFSSRDDVDF--F 1138
                 +FHVG  V+   +  +V  G + +     ++GT+ GS G +      D+V F   
Sbjct: 1306 ----AEFHVGAHVSKFLRLQMVSSGADKINRFALLFGTLDGSFGCIAPL---DEVTFRRL 1358

Query: 1139 SHLEMHMRQEHPPLCGRDHMAYRSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIA 1191
              L+  +    P + G + +A+R      K        ++D +L   +  L L+ Q ++A
Sbjct: 1359 QSLQKKLVDAVPHVAGLNPLAFRQFRSSGKARRSGPDSIVDCELLCHYEMLPLEEQLELA 1418

Query: 1192 DELDRTPGEILKKLEEI 1208
             ++  T   ILK L ++
Sbjct: 1419 HQIGTTRYSILKDLVDL 1435



 Score = 43.5 bits (101), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 70/339 (20%), Positives = 121/339 (35%), Gaps = 62/339 (18%)

Query: 246 GVLVCAENFVIYKNQGHPDVRAV------IPRRADLPAERGVLIVSAATHRQKTLFFFLL 299
           GVLV   N + Y +Q      A+           +LPA    + + AA     +    LL
Sbjct: 323 GVLVLCANTIHYHSQSASCALALNNYASSADSSQELPASNFSVELDAAHGTWISNDVALL 382

Query: 300 QTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA 359
            T+ G++  +TL +D   V  L +       + + +  + +   F  S  G+  L QF  
Sbjct: 383 STKSGELLLLTLIYDGRAVQRLDLSKSKASVLASDITSVGNSLFFLGSRLGDSLLVQFSC 442

Query: 360 IGA-----------DPDVEA---SSSTLMETEEGFQPVF--------------------- 384
                         D D+E     +  L  T + FQ                        
Sbjct: 443 RSGPAASLPGLRDEDEDIEGEGHQAKRLRMTSDTFQDTIGNEELSLFGSTPDNSDSAQKS 502

Query: 385 FQPRGLKNLVRIEQVE----SLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGL 440
           F      +LV +  V+     L    D     + ++   ++    G G   +L +LR  +
Sbjct: 503 FSFAVRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSI 562

Query: 441 AVSEMAVSQLPGVPSAVWTVKKNVN--------------DEFDAYIVVSFNNATLVLSIG 486
               +   +LPG    +WTV    +              DE+ AY+++S    T+VL   
Sbjct: 563 RPEMITEVELPGC-KGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLETA 621

Query: 487 ETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
           + + EV++S   ++      A +L G   ++QV   G R
Sbjct: 622 DLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFEHGAR 660


>gi|339253000|ref|XP_003371723.1| cleavage and polyadenylation specificity factor subunit 1
           [Trichinella spiralis]
 gi|316967988|gb|EFV52332.1| cleavage and polyadenylation specificity factor subunit 1
           [Trichinella spiralis]
          Length = 1376

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 126/591 (21%), Positives = 225/591 (38%), Gaps = 116/591 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR------------------ 42
           MY        PT +  ++ G+F+ T   E+VVA    L++ +                  
Sbjct: 1   MYAVHRQTDAPTAVNKSMFGHFTQTDDWEVVVACDSYLKIYKLRPAKLTSDTMECGGGLC 60

Query: 43  PENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKI- 101
           P N    E ++S +++G + S+A  RLTG Q D I++  D  ++ ++ Y+   +    + 
Sbjct: 61  PTNLASFELVLSEQVYGRLASVAIARLTGFQLDVILLAIDDAKLSVVGYDIETHSLVTLS 120

Query: 102 ---HQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAAR-LTISSPL 157
              +++   K G  R      L +DP+ R   +       +V  L R++    + I  P 
Sbjct: 121 MHYYEDDLFKLGFTRFEIPPMLRMDPERRCAAMTIYGAHLVVLPLVRESLYESMNIVDPS 180

Query: 158 EAH--------KSHTIVYSICG------IDCGFDNPIFAAIELDYSEADQDSTGQAASEA 203
           +           S+T+ ++          D  F +  +    L   E  Q + G+     
Sbjct: 181 QRPGWPFSLRLTSYTVAFNAIDAKMHNVTDMCFLHGFYEPTVLLLYEPTQTTAGRVVV-- 238

Query: 204 QKNLTFYELDLGLNHVSRK----WS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVI 256
            +  T+  L + LN   +     W+    P D  A + +  P G     GVL+ + N +I
Sbjct: 239 -RQDTYQILAVSLNPKDKTHAVIWTLGNLPFDAFALLALPKPLG-----GVLLFSVNSII 292

Query: 257 YKNQGHPDVRAVI----------PRR------ADLPAERGVLIVSAATHRQKTLFFFLLQ 300
           Y NQ  P    +I          P R        L      LI SA            L 
Sbjct: 293 YLNQSVPCCGILINDNGRGFTNYPLRDRSELMVTLDGSHAALIDSANAA---------LV 343

Query: 301 TEYGDIFKVTLEHDNEHVSELKIKYFDTI----PVTASMCVLKSGYLFAASEFGNHALYQ 356
              G +F V+L  D  ++ +  +    ++    P T S CV  S  LF  S  GN ALY 
Sbjct: 344 LRSGLVFVVSLLFDRLNMVKEILLTASSVRGAAPSTVSACV-SSNCLFVGSAIGNSALYA 402

Query: 357 FQAIGADPDVEASSSTLMETEEGFQPV--------FFQPRGLKNLV-------RIEQVES 401
           ++AI     V+  + TL   + G   +          +P   + LV       R++Q+ S
Sbjct: 403 YEAI---EQVDVVAVTLPARDTGLNLLDDMQLYGELIRPCTTETLVQTKFEFRRLDQLAS 459

Query: 402 LMPIMDMRIA--------NLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
           L P   + +         N +E+         G G   S  +++  +    +  +++  V
Sbjct: 460 LGPCRAITVGESSVAMVNNFYEDYVSDWLVAGGPGTDGSFTVMQRSVRPRLLTQTRVEDV 519

Query: 454 PSAVWTVKKNVNDEFD-------AYIVVSFNNATLVLSIGETVEEVSDSGF 497
            +A W+V   +    D        Y++++    T+V ++   + E+ D+GF
Sbjct: 520 LNA-WSVGAQLIGSVDRSASPRPQYMLLTTKQRTVVFTLSSGITEIFDTGF 569


>gi|297792471|ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309955|gb|EFH40379.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1444

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 164/377 (43%), Gaps = 56/377 (14%)

Query: 862  IRVLDPRSAN----TTCLLELQDNEAAFSICTV---NFHDKEHGTLLAVGTAKGLQFWPK 914
            I++L+P  +     T   + +Q +E A ++  V   N    E+ TLLAVGTA    +   
Sbjct: 1087 IQILEPERSGGPWETKATIPMQSSEHALTVRVVTLLNASTGENETLLAVGTA----YVQG 1142

Query: 915  RNIVA-GYIHIYRFVEEGKS----LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL 969
             ++ A G + ++ F + G +    +  ++  +++G   A+   QG LL   GP + L+  
Sbjct: 1143 EDVAARGRVLLFSFGKNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW 1202

Query: 970  GKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD--SVP 1027
                L         P  +VS+N  +  I +GD+ +S +F  ++   +QL + A D  S+ 
Sbjct: 1203 NGTELNGVAFFDAPPLYVVSMNVVKTFILLGDVHKSIYFLSWKEQGSQLSLLAKDFGSLD 1262

Query: 1028 RWLTAAHHIDFDT--MAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNK 1085
             + T    ID +T  +A +D+  NI        +++            W+  KL      
Sbjct: 1263 CFAT-EFLIDGNTLSLAVSDEQKNIQVFYYAPKMAE-----------SWKGQKLLSR--- 1307

Query: 1086 MEEIVQFHVGDVVTSLQKASLVPGGGE-----SVIYGTVMGSLGAMLAFSSRDDVDF--F 1138
                 +FHVG  VT   +  +V  G +     ++++GT+ GS G +      D+V F   
Sbjct: 1308 ----AEFHVGSHVTKFLRLQMVTSGADKTNRFALLFGTLDGSFGCIAPL---DEVTFRRL 1360

Query: 1139 SHLEMHMRQEHPPLCGRDHMAYRSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIA 1191
              L+  +    P + G +  ++R      K        +ID +L   +  L L+ Q ++A
Sbjct: 1361 QSLQKKLVDAVPHVAGLNPHSFRQFRTSGKARRSGPDSIIDCELLCHYEMLPLEEQLELA 1420

Query: 1192 DELDRTPGEILKKLEEI 1208
             ++  T   IL  L E+
Sbjct: 1421 HQIGTTRSVILLNLVEL 1437


>gi|339896885|ref|XP_001463052.2| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|321398922|emb|CAM65399.2| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 1983

 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 22/205 (10%)

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE---DPTGGKIKWEQGKLN 1080
            DSVPR +T+   +D  T+A +D+FG + F+R+P+    +  +        ++  E+  L 
Sbjct: 1761 DSVPRHITSVVAVDERTIAASDRFGTVVFLRIPETTRTQFAQPVHQLQEAELIAEETYLR 1820

Query: 1081 GAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES-------VIYGTVMGSLGAMLAFSSRD 1133
                   E+ + HVG++VT+L      P  G         V Y T +GS+GA +   S +
Sbjct: 1821 -TKQTFREVARHHVGELVTALHVQPYDPSQGTDTALATKIVYYSTALGSIGAYVPLLSEE 1879

Query: 1134 DVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF-----PTLSLDLQR 1188
            D    ++L+  +     PL G       ++Y     V+DGD+ +          S   + 
Sbjct: 1880 DGALAAYLQPLLHSHMRPLLGPPPALSPASYLS-HHVVDGDVAQLLRGGATTPFSAAAKD 1938

Query: 1189 KIADELDRTPGEILKKLEEIRNKIV 1213
             IADEL+R       K+E  R  ++
Sbjct: 1939 DIADELERQ-----VKMEAARRNVL 1958



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 113/308 (36%), Gaps = 97/308 (31%)

Query: 151 LTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQ----------------- 193
           + + +P+E  +  T++YS C +D   D+ +FA +E +  EA                   
Sbjct: 314 INLGTPIEMQR-QTVLYSACALDGYLDHAVFAVLEEEIVEARDAAAASASNPANAAAAAA 372

Query: 194 --------DSTG--QAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDG 243
                    S+G   A  +  K+   Y     L  V R     V   A+ L+ VP    G
Sbjct: 373 EASGGTFLKSSGGPNAVVQRHKHFVLYAYVPSLKQVQRTQLVHVPATAHRLIAVPAAPYG 432

Query: 244 PSGVLVCAENFVIYKN------------------QGHPDVRAVIPRRADLPAERGVLIVS 285
           P GVLVC +  +I+ +                   G        PRR D        I+ 
Sbjct: 433 PGGVLVCTDTELIWYDVSATQQQQQNSAAAANGRVGVFKCTYAFPRRLDC-----TEILY 487

Query: 286 AATHRQKTL------FFFLLQTEYGDIFKVTLE-------HDNEHVSEL----------- 321
             +  Q TL      FF LLQ E GD+++V LE       ++     EL           
Sbjct: 488 DPSIIQHTLTCFGRRFFMLLQDEQGDVYRVFLEAGDVQRAYEALRTRELAQANPELFLQQ 547

Query: 322 ---------------------KIKYFDTIPVTASMCVLKSGYLFAASEFGN-HALYQFQA 359
                                 + YFDT+P +++M + + G+LF  +E G  H LY+ ++
Sbjct: 548 QLAANGGVAPAPALPPVPNPLSVHYFDTLPPSSAMALFRRGFLFIGNEAGPLHGLYKIKS 607

Query: 360 IGADPDVE 367
            G   D E
Sbjct: 608 NGYTADRE 615


>gi|409078983|gb|EKM79345.1| hypothetical protein AGABI1DRAFT_39860 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1236

 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 191/917 (20%), Positives = 337/917 (36%), Gaps = 174/917 (18%)

Query: 328  TIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA----SSSTLMETEEGFQPV 383
            T+P+   + V+ S      S F   A  + +A    P+ +A       T+   E G    
Sbjct: 401  TLPIPCDVHVIPS------SSFDISAFKKGKARATSPEFDAMDLDGCDTVSPQESGN--- 451

Query: 384  FFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVS 443
              + RG   L  +E+ +++ PI+D  + +  +    QI T  G     S+  +R G    
Sbjct: 452  IVETRG-SYLNVLERFKNIAPILDACLVDP-DSGQRQIVTCSGGKNTGSINAVRNGADFE 509

Query: 444  EMAVSQLPGVPSA--VWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVS-------- 493
            E+    +PGVP    +W +K  + +  D+++++SF N++ ++ I ++ + +S        
Sbjct: 510  EIV--NIPGVPHVLKIWALKSRLEEAEDSFLLLSFCNSSSLIKINDSGDNISFAPFDNAI 567

Query: 494  DSGFLDTTPSLAVSLI-----GDDS---------LMQVHPSGIRHIREDG------RINE 533
             SG +   P++A + +     G D          ++QV  SG   +  D       RI+E
Sbjct: 568  ASGLVTVEPTIAFANVAQRVKGQDGKARYMNSSLVVQVTGSGAFLLELDQGLQTYIRIDE 627

Query: 534  WRTPGKRT------IVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV----EKHEMSGD 583
            W             IV    N  QV +A+SGG+L    V    +L  V           +
Sbjct: 628  WNAKKNVADGITPEIVAASINSSQVALAISGGKLALLSVAEDKKLRVVVSTLNDCNRQPE 687

Query: 584  VACLDIASVPEGRKRSRFLAVGSYD-NTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV 642
            ++ +  + +   R  S+ + V  ++ N I + +        +     + S   SL F   
Sbjct: 688  ISAISCSPLNPARAFSQHIVVSYWESNIIEVFTPSDSGFKSVCKSSPLPSLVSSLRFYNF 747

Query: 643  QASVGGEDGADHPASLFLNAGLQNGVL--FRTVVDMVTGQLSDSRSRFLGLRPPKL-FSV 699
             +    +    HP   +L AGL +G +  FR        +L + +   LG  P  L    
Sbjct: 748  GSDQSSKGADYHP---YLLAGLSDGSVATFR----WQDQELKERKIVSLGHAPVSLAVCS 800

Query: 700  VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
            ++G    +L    R  +    RGR + +P+    +  A+  ++      +V+     L +
Sbjct: 801  ILGDAKTVLAAGDRAVVFAYERGRLVYSPILLRNIAAASPLNTSSLPMSLVAATAEGLHI 860

Query: 760  FTIERLGETFNETALPLRY-TPRRFVLQPKKKL--MVIIETDQGALTAEEREAAKKECFE 816
              I+ L +  +  ++P     PR+   QP      + ++ T+   + A E    +K  F 
Sbjct: 861  GKIKDLNK-LHIRSIPFGLDNPRKITHQPLLSAFGVALVYTEPAEIGAHE---VRKSFFS 916

Query: 817  AAGMGENGNGNMDQMENGDDE--NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTC 874
                          +++   E   K+D  +DE+           VS I    P SA    
Sbjct: 917  L-------------LDDASFEVLAKFDCDADEEI----------VSII----PFSAVVDG 949

Query: 875  LLELQDNEAAFSICTVNFH------DKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFV 928
            +L        F + T  F       DK    L+++ T         RN   GY       
Sbjct: 950  IL-----TPFFVLGTFIFRPEEFEPDKGRILLISISTTNN-----PRNPRQGY------- 992

Query: 929  EEGKSLELLHKTQVEGIPLALCQF-----QGRLLAGIGPVLRLY--DLGKKRL-----LR 976
                 L L    +V G   AL          R++A +   + L+  D+  K       LR
Sbjct: 993  ----QLSLAASIEVRGCVYALTPIVDDKPVARIVAAVNSSVNLFSLDIDTKIYPAGLHLR 1048

Query: 977  KCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI 1036
            K         +  +    + ++VGD   S    K    E +    A D  PRW  +   I
Sbjct: 1049 KMAEWNHNYLVTGLGAVGNHVFVGDQISSVSLLKCT--EEKFQTVARDYGPRWPVSVEAI 1106

Query: 1037 DFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGD 1096
            D   +  A+   NI+   L +++   +  D TG                      +H+ D
Sbjct: 1107 DEKNVIAANDALNIFTFTLSRNLGRSV-LDCTG---------------------NYHIAD 1144

Query: 1097 VVTSLQKASLVP-GGGESV------IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEH 1149
            +VT   + SLV     E        ++ T  G +G ++   + D     S L+ +M    
Sbjct: 1145 LVTKFIRGSLVTIEQSEKADLEPEELFFTSSGCIGVIVNVKNEDVSIHLSGLQRNMSAII 1204

Query: 1150 PPLCGRDHMAYRSAYFP 1166
            P + G  H  Y   Y P
Sbjct: 1205 PNVGGTSHARYVYLYLP 1221


>gi|358056808|dbj|GAA97158.1| hypothetical protein E5Q_03834 [Mixia osmundae IAM 14324]
          Length = 1243

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 179/439 (40%), Gaps = 56/439 (12%)

Query: 296 FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
             L+  E G +  V +    E V+ L +     +P   S+  +   Y+F  S +G+ +L 
Sbjct: 416 LLLVGDEEGYLVSVRIGLQGERVTSLDVVDLGKVPSPTSLTHIADEYVFVGSYYGDSSLV 475

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
              A+ +D  +E  S ++                      I  + +L PI+D  +    +
Sbjct: 476 AIPALTSD-GMECDSVSV----------------------ISAMANLAPIVDFCVVT-DD 511

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
                + T  G     SLR++R G+ +S +A   LP V +A W +K   +      I+VS
Sbjct: 512 VGQSHLVTCSGAKNSGSLRLVRQGVGLSILATIDLPAVQNA-WPLKLASSSIKHDAILVS 570

Query: 476 FNNATLVLSIGE-TVEEVSDSGFLDTTPSLAVSLIGD---DSLMQVHPSGIRHIREDGRI 531
           F + + +LS+    + E++      T P+L    +GD      +      I  +  +   
Sbjct: 571 FLDRSQLLSLCNGNLSELASPAL--TEPTLYAGTLGDAGAQVAICATAKAILRLSIEKPS 628

Query: 532 NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIAS 591
             W +P    I    S+   +++A S   L+   +   G  L   K  +S +V+CL   +
Sbjct: 629 ELWTSPTGDLITAASSDGSSLLLATSSKALVLMTLSPNGIALTTTKQTIS-EVSCLAAWT 687

Query: 592 VPEGRKRSRFLAVGSYD-NTIRILS---LDPDDCMQILSVQSVSSPPESLLFLEVQASVG 647
              G   S+  AV S+  N I + S   L+P    ++    S    P+S+LF +      
Sbjct: 688 TTTG---SQIAAVASWSTNAILLYSLPHLEPVTGAEL----SFDHLPQSMLFQKF----- 735

Query: 648 GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL--SDSRSRFLGLRPPKLFSVVVGGRA 705
            ED A H   LF+  GL +G L    +D  +G +     +S  LG +P  L      G+ 
Sbjct: 736 -EDDAVH---LFV--GLGSGDLISFGIDAASGAVLPLSRKSVTLGKKPVLLSQCSAAGQP 789

Query: 706 AMLCLSSRPWLGYIHRGRF 724
           A+  ++ RP +     GR 
Sbjct: 790 AVFAVTDRPTVVSRSAGRL 808



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 134/323 (41%), Gaps = 42/323 (13%)

Query: 876  LELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLE 935
             +LQ +E   ++ TV+ H   H    AVGTA   +    R    G   +  F+ +G   E
Sbjct: 912  FDLQSDEHGTALETVSLHGAAH---FAVGTAFSDRTVDAREPKKG--RVLTFMRDGDKFE 966

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPV-LRLYDLGKKRLLRKCENKLFPNTIVSINTYR 994
                  +EG    LCQ     LA I    ++++ + ++  + +           SI++  
Sbjct: 967  QHVHAVLEGGVFGLCQLPNSFLAAIANAQVKVFHVTEQAHIDQMTCWAGTFLAQSISSRD 1026

Query: 995  DRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDF--DTMAGADKFGNIYF 1052
             +I VGD+  S    ++   ++ L   A +     ++A   + F  D   G ++  NI+ 
Sbjct: 1027 SQIIVGDLYRSVVLLQWDEAKDTLSEVAREHHVNGMSAVEFLGFTDDRYIGTEQELNIF- 1085

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP---- 1108
                      + +  T  +I           + +E    FH+G+ VT ++K +LVP    
Sbjct: 1086 ---------TLTKTKTRERI-----------DILETEGMFHIGEYVTRIRKGALVPGYTD 1125

Query: 1109 ---GGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF 1165
               G    +++GT  GSLG ++  +    +  F+ LE +MR       G + + +R+   
Sbjct: 1126 TSFGAAPQLLFGTSDGSLGVIVNCTPEVSLKLFA-LERNMRAVIRAFGGLEQVDWRAFRA 1184

Query: 1166 PVK-----DVIDGDLCEQFPTLS 1183
            P +       +DGD+  +F  L+
Sbjct: 1185 PHRVHEPVGFVDGDMIGRFAELN 1207


>gi|242075246|ref|XP_002447559.1| hypothetical protein SORBIDRAFT_06g003570 [Sorghum bicolor]
 gi|241938742|gb|EES11887.1| hypothetical protein SORBIDRAFT_06g003570 [Sorghum bicolor]
          Length = 389

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 158/367 (43%), Gaps = 59/367 (16%)

Query: 872  TTCLLELQDNEAAFSICTVNFHD---KEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRF 927
            T   + +Q  E A ++  V   +   KE+ TL+A+GTA    +    ++ A G + +Y F
Sbjct: 45   TRFTIPMQSFENALTVRIVTLQNTSTKENETLMAIGTA----YVQGEDVAARGRVLLYSF 100

Query: 928  VEEGKSLELL---HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP 984
                 S  L+   +  + +G   A+   QG LL   GP + L       L         P
Sbjct: 101  SRSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGSELTAVAFYDA-P 159

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD--SVPRWLTAAHHIDFDTM- 1041
              +VS+N  ++ +  GDI +S +F  ++   +QL + A D  S+  + T    ID  T+ 
Sbjct: 160  LHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLNLLAKDFGSLDCFAT-EFLIDGSTLS 218

Query: 1042 ---AGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVV 1098
               + +DK   I++   P+ V              W+  KL           +FHVG  V
Sbjct: 219  LVVSDSDKNVQIFYYA-PKMVES------------WKGQKLLSR-------AEFHVGAHV 258

Query: 1099 TSLQKASLVPGGGE--------SVIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMHMRQE 1148
            +   +  ++P  G         ++++GT+ G +G +   +  D++ F     L+  +   
Sbjct: 259  SKFLRLQMLPTQGLASEKTNRFALVFGTLDGGIGCI---APVDELTFRRLQSLQRKLVDA 315

Query: 1149 HPPLCGRDHMAYR------SAYFPVKD-VIDGDLCEQFPTLSLDLQRKIADELDRTPGEI 1201
             P +CG +  ++R       A+ P  D +ID +L   +  LSL+ Q +IA ++  T  +I
Sbjct: 316  VPHVCGLNPRSFRHFKSNGKAHRPGPDNIIDFELLSHYEMLSLEEQLEIAQQIGTTRSQI 375

Query: 1202 LKKLEEI 1208
            L    + 
Sbjct: 376  LSNFSDF 382


>gi|225455571|ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 111/548 (20%), Positives = 216/548 (39%), Gaps = 83/548 (15%)

Query: 701  VGGRAAMLCLSSRPWLGYIHRGRFLLTP-LSYETLEYAASFSSDQCVEGVVSVAGNA-LR 758
            +GG   +    SRP    + R R  + P L   ++       +  C  G++ V     L+
Sbjct: 931  IGGCQGLFLSGSRPLWFMVFRERIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLK 990

Query: 759  VFTIERLGETFNE---TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECF 815
            +  +  +    N      +PL+ TP +     +K L  +I      L       +     
Sbjct: 991  ICQLPAVSSYDNYWPVQKIPLKGTPHQVTYFAEKNLYPLI-VSVPVLKPLNHVLSSLVDQ 1049

Query: 816  EAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSA----N 871
            EA    EN N + D++      ++++                    +RVL+P  +     
Sbjct: 1050 EAGHQLENDNLSSDELHRSYSVDEFE--------------------VRVLEPEKSGAPWQ 1089

Query: 872  TTCLLELQDNEAAFSICTV---NFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYR 926
            T   + +Q +E A ++  V   N   KE+ TLLA+GTA  +G     +  ++     + +
Sbjct: 1090 TRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQGEDVAARGRVL--LFSVGK 1147

Query: 927  FVEEGKSL-ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPN 985
              +  ++L   ++  +++G   A+   QG LL   GP + L+      L         P 
Sbjct: 1148 NTDNSQNLVSEIYSKELKGAISAVASLQGHLLIASGPKIILHKWTGTELNGVAFFDAPPL 1207

Query: 986  TIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD 1045
             +VS+N  ++ I +GDI  S +F  ++    QL + A D                    D
Sbjct: 1208 YVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQLNLLAKD----------------FGSLD 1251

Query: 1046 KFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA--PNKMEEIVQFHVGDVVTSLQK 1103
             F   + +     +S  + +D    +I +   K++ +    K+    +FHVG  VT   +
Sbjct: 1252 CFATEFLID-GSTLSLIVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLR 1310

Query: 1104 ASLVPGGGE--------------SVIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMHMRQ 1147
              ++P   +              ++++GT+ GS+G +      D++ F     L+  +  
Sbjct: 1311 LQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPL---DELTFRRLQSLQKKLVD 1367

Query: 1148 EHPPLCGRDHMAYR------SAYFPVKD-VIDGDLCEQFPTLSLDLQRKIADELDRTPGE 1200
              P + G +  ++R       A+ P  D ++D +L   +  L  + Q +IA ++  T  +
Sbjct: 1368 AVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQIGTTRMQ 1427

Query: 1201 ILKKLEEI 1208
            IL  L ++
Sbjct: 1428 ILSNLNDL 1435



 Score = 46.6 bits (109), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 122/609 (20%), Positives = 226/609 (37%), Gaps = 124/609 (20%)

Query: 28  PEIVVARGKVLE--LLRPENSGRIETLVSTE---------IFGAIRSL-AQFRLTGS--- 72
           P ++V    +LE  ++R +     E+  S E         I GA   L  Q+RL G+   
Sbjct: 56  PNLIVTAANILEVYMVRVQEDDSRESRASAETKRGGVMAGISGAALELVCQYRLHGNVET 115

Query: 73  -------------QKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG-------KSGCR 112
                        ++D I++     +I +LE++ S +         F        K G  
Sbjct: 116 MTVLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHE 175

Query: 113 RIVPGQYLAVDPKGRAVMIGACEKQKLV-------YVLNRDTAARLTISSPLEAHKSHTI 165
               G  + VDP+GR   +     Q ++       Y L  D  A L+  S + A    + 
Sbjct: 176 SFARGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEA-LSSGSAVSARVESSY 234

Query: 166 VYSICGIDC----------GFDNPIFAAIELDYSEADQDSTGQAASEAQKNL-TFYELDL 214
           V S+  +D           G+  P+   +     E +    G+ + +    + +   +  
Sbjct: 235 VISLRDLDMKHVKDFTFVHGYIEPVMVILH----ERELTWAGRVSWKHHTCMISALSIST 290

Query: 215 GLNHVSRKWSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAV--- 268
            L      WS    P D    + V  P GG     V+V + N + Y +Q      A+   
Sbjct: 291 TLKQHPLIWSAVNLPHDAYKLLPVPSPIGG-----VVVISANSIHYHSQSASCALALNNY 345

Query: 269 ---IPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKY 325
                   ++P     + + AA     +    +L T+ G++  +TL +D   V  L +  
Sbjct: 346 AVSADNSQEMPRSSFSVELDAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSK 405

Query: 326 FDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADP------DVE-----------A 368
                +T+ +  + +   F  S  G+  L QF +I +        D+E           +
Sbjct: 406 SRASVLTSGIAAIGNSLFFLGSRLGDSLLVQFTSILSSSVKEEVGDIEGDVPSAKRLRKS 465

Query: 369 SSSTLMETEEGFQPVFF--QPRGLKNLVRI------EQVESLMPIMD----MRI------ 410
           SS  L +   G +   +   P   +   +       +   ++ P+ D    +RI      
Sbjct: 466 SSDALQDMVNGEELSLYGSAPNSTETSQKTFSFSVRDSFINVGPLKDFAYGLRINADPKA 525

Query: 411 ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV-KKNV----- 464
             + ++   ++    G G   +L IL+  +    +   +LPG    +WTV  KN      
Sbjct: 526 TGIAKQSNYELVCCSGHGKNGALCILQQSIRPEMITEVELPGC-KGIWTVYHKNTRGHNA 584

Query: 465 --------NDEFDAYIVVSFNNATLVLSIGETVEEVSDS--GFLDTTPSLAVSLIGDDSL 514
                   +DE+ AY+++S  + T+VL   + + EV++S   ++      A +L G   +
Sbjct: 585 DSTKMATKDDEYHAYLIISLESRTMVLETADLLGEVTESVDYYVQGCTISAGNLFGRRRV 644

Query: 515 MQVHPSGIR 523
           +QV+  G R
Sbjct: 645 VQVYARGAR 653


>gi|296084122|emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 111/548 (20%), Positives = 216/548 (39%), Gaps = 83/548 (15%)

Query: 701  VGGRAAMLCLSSRPWLGYIHRGRFLLTP-LSYETLEYAASFSSDQCVEGVVSVAGNA-LR 758
            +GG   +    SRP    + R R  + P L   ++       +  C  G++ V     L+
Sbjct: 937  IGGCQGLFLSGSRPLWFMVFRERIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLK 996

Query: 759  VFTIERLGETFNE---TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECF 815
            +  +  +    N      +PL+ TP +     +K L  +I      L       +     
Sbjct: 997  ICQLPAVSSYDNYWPVQKIPLKGTPHQVTYFAEKNLYPLI-VSVPVLKPLNHVLSSLVDQ 1055

Query: 816  EAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSA----N 871
            EA    EN N + D++      ++++                    +RVL+P  +     
Sbjct: 1056 EAGHQLENDNLSSDELHRSYSVDEFE--------------------VRVLEPEKSGAPWQ 1095

Query: 872  TTCLLELQDNEAAFSICTV---NFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYR 926
            T   + +Q +E A ++  V   N   KE+ TLLA+GTA  +G     +  ++     + +
Sbjct: 1096 TRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQGEDVAARGRVL--LFSVGK 1153

Query: 927  FVEEGKSL-ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPN 985
              +  ++L   ++  +++G   A+   QG LL   GP + L+      L         P 
Sbjct: 1154 NTDNSQNLVSEIYSKELKGAISAVASLQGHLLIASGPKIILHKWTGTELNGVAFFDAPPL 1213

Query: 986  TIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD 1045
             +VS+N  ++ I +GDI  S +F  ++    QL + A D                    D
Sbjct: 1214 YVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQLNLLAKD----------------FGSLD 1257

Query: 1046 KFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA--PNKMEEIVQFHVGDVVTSLQK 1103
             F   + +     +S  + +D    +I +   K++ +    K+    +FHVG  VT   +
Sbjct: 1258 CFATEFLID-GSTLSLIVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLR 1316

Query: 1104 ASLVPGGGE--------------SVIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMHMRQ 1147
              ++P   +              ++++GT+ GS+G +      D++ F     L+  +  
Sbjct: 1317 LQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPL---DELTFRRLQSLQKKLVD 1373

Query: 1148 EHPPLCGRDHMAYR------SAYFPVKD-VIDGDLCEQFPTLSLDLQRKIADELDRTPGE 1200
              P + G +  ++R       A+ P  D ++D +L   +  L  + Q +IA ++  T  +
Sbjct: 1374 AVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQIGTTRMQ 1433

Query: 1201 ILKKLEEI 1208
            IL  L ++
Sbjct: 1434 ILSNLNDL 1441



 Score = 47.4 bits (111), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 125/617 (20%), Positives = 226/617 (36%), Gaps = 134/617 (21%)

Query: 28  PEIVVARGKVLE--LLRPENSGRIETLVSTE---------IFGAIRSL-AQFRLTGS--- 72
           P ++V    +LE  ++R +     E+  S E         I GA   L  Q+RL G+   
Sbjct: 56  PNLIVTAANILEVYMVRVQEDDSRESRASAETKRGGVMAGISGAALELVCQYRLHGNVET 115

Query: 73  -------------QKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG-------KSGCR 112
                        ++D I++     +I +LE++ S +         F        K G  
Sbjct: 116 MTVLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHE 175

Query: 113 RIVPGQYLAVDPKGRAVMIGACEKQKLV-------YVLNRDTAARLTISSPLEAHKSHTI 165
               G  + VDP+GR   +     Q ++       Y L  D  A L+  S + A    + 
Sbjct: 176 SFARGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEA-LSSGSAVSARVESSY 234

Query: 166 VYSICGIDC----------GFDNPIFAAIELDYSEADQDSTGQAASEAQKNL-TFYELDL 214
           V S+  +D           G+  P+   +     E +    G+ + +    + +   +  
Sbjct: 235 VISLRDLDMKHVKDFTFVHGYIEPVMVILH----ERELTWAGRVSWKHHTCMISALSIST 290

Query: 215 GLNHVSRKWSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAV--- 268
            L      WS    P D    + V  P GG     V+V + N + Y +Q      A+   
Sbjct: 291 TLKQHPLIWSAVNLPHDAYKLLPVPSPIGG-----VVVISANSIHYHSQSASCALALNNY 345

Query: 269 ---IPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKY 325
                   ++P     + + AA     +    +L T+ G++  +TL +D   V  L +  
Sbjct: 346 AVSADNSQEMPRSSFSVELDAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSK 405

Query: 326 FDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADP------DVE-----------A 368
                +T+ +  + +   F  S  G+  L QF +I +        D+E           +
Sbjct: 406 SRASVLTSGIAAIGNSLFFLGSRLGDSLLVQFTSILSSSVKEEVGDIEGDVPSAKRLRKS 465

Query: 369 SSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLM----------------PIMD----M 408
           SS  L +   G +   +      N     QVE+ +                P+ D    +
Sbjct: 466 SSDALQDMVNGEELSLYG--SAPNSTETSQVEAQVGKTFSFSVRDSFINVGPLKDFAYGL 523

Query: 409 RI------ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV-K 461
           RI        + ++   ++    G G   +L IL+  +    +   +LPG    +WTV  
Sbjct: 524 RINADPKATGIAKQSNYELVCCSGHGKNGALCILQQSIRPEMITEVELPGC-KGIWTVYH 582

Query: 462 KNV-------------NDEFDAYIVVSFNNATLVLSIGETVEEVSDS--GFLDTTPSLAV 506
           KN              +DE+ AY+++S  + T+VL   + + EV++S   ++      A 
Sbjct: 583 KNTRGHNADSTKMATKDDEYHAYLIISLESRTMVLETADLLGEVTESVDYYVQGCTISAG 642

Query: 507 SLIGDDSLMQVHPSGIR 523
           +L G   ++QV+  G R
Sbjct: 643 NLFGRRRVVQVYARGAR 659


>gi|395860104|ref|XP_003802355.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Otolemur garnettii]
          Length = 1441

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 129/634 (20%), Positives = 233/634 (36%), Gaps = 120/634 (18%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTGI  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGIEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEVLTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             +D  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE 316
                +           L  + GV I +  A     +    ++  + G+I+ +TL  D  
Sbjct: 295 PYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG- 353

Query: 317 HVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTL 373
            +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A+  + 
Sbjct: 354 -MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASATRESA 412

Query: 374 METEEGFQPVFFQP----RGLKNLVR-----------------------IEQVESLMPIM 406
            + E   +     P     G K++ +                        E  +S++ I 
Sbjct: 413 DKEEPPSKKKRVDPSVGWSGGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIG 472

Query: 407 DMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP 454
               A + E        + +P    +I    G G   +L +L+  +    +   +LPG  
Sbjct: 473 PCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC- 531

Query: 455 SAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGETVE 490
             +WTV  +V  E +                         ++++S  ++T++L  G+ + 
Sbjct: 532 YDMWTVIASVRKEEEETPKGEGTEQESGVPEGEEDGRRHGFLILSREDSTMILQTGQEIM 591

Query: 491 EVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 592 ELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 625


>gi|443894313|dbj|GAC71661.1| hypothetical protein PANT_5d00006 [Pseudozyma antarctica T-34]
          Length = 1625

 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 178/417 (42%), Gaps = 61/417 (14%)

Query: 392  NLVRIEQVESLMPIMDMRI-------ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSE 444
             L  IE  ++L PI+D  +        +       +I T  G GP  S+R +R G +V E
Sbjct: 755  TLHTIESWQNLGPIVDFVVDDGAGGDPSASSGAQARIVTCSGAGPSGSIREVRTGASVQE 814

Query: 445  MAVSQLPGVPSA--VWTVKKN-VNDEFDAYIVVSFNNATLVL------SIGETVEEVSDS 495
              V  LP +P+A  +W V       +  + I+V F  +T  L      ++ +  + ++  
Sbjct: 815  --VCTLP-IPNAQHIWPVHAGPTGSKQTSGILVGFATSTAYLYFDVDGNLVDATDRLAAV 871

Query: 496  GFLDTTPSLAVSLIGDDS----LMQVHPSGIRHIREDGR----INEWRTPGKRTIVKVGS 547
                  P+LA S + D+S    L++V  +     R  G     +++W  P    I    +
Sbjct: 872  CRSTANPTLAASSLVDESGSALLLRVAHTDFSLFRCQGGSIALLHQWSPPSGCEITTASA 931

Query: 548  NRL-QVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGS 606
            N L Q VIALS   L+Y   +    L E  K  +  +V+CLDI+ +  G   ++  A+G 
Sbjct: 932  NDLGQCVIALSDKSLVYLTAEAE-SLTERGKTSLEHEVSCLDISCLSPGEP-AQIAAIGF 989

Query: 607  YD-NTIRILSLDPDDCMQILSV--QSVSSPPESLLFLEVQASVGGEDGADHPA------- 656
            +   TI+ILSL     +   SV  Q + + P SLL L   AS     GA   +       
Sbjct: 990  WQARTIQILSLPDLSPVGQSSVVQQQLPAVPRSLL-LHRFASKQTRQGASRQSRTSLRNR 1048

Query: 657  ---SLFLNAGLQNGVLFRTVVDMVTGQ-------LSDSRSRFLGLRPPKLFSVVVGGRAA 706
               S  L  GL +G L    V + T +       L D ++  LG +  KL ++     A 
Sbjct: 1049 DALSPHLLIGLGDGTLITYSVSLPTDESFSRTVGLFDCKTLSLGTQALKLDAIETSSGAR 1108

Query: 707  MLCLS-SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI 762
            ++ +S SRP L +    RF     SY  L++       +CV  +   A   L  F++
Sbjct: 1109 VVAVSGSRPTLVFADSKRF-----SYNALQHG----DQRCVATLYVGAEQVLNAFSL 1156


>gi|47200328|emb|CAF88076.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 47

 Score = 68.2 bits (165), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 38/44 (86%)

Query: 939 KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKL 982
           +T VE +PLA+  FQGR+L G+G +LR+YD+GKK+LLRKCENK+
Sbjct: 4   QTPVEDVPLAIAPFQGRVLVGVGKLLRIYDMGKKKLLRKCENKV 47


>gi|302761560|ref|XP_002964202.1| hypothetical protein SELMODRAFT_82277 [Selaginella moellendorffii]
 gi|300167931|gb|EFJ34535.1| hypothetical protein SELMODRAFT_82277 [Selaginella moellendorffii]
          Length = 1413

 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 149/361 (41%), Gaps = 64/361 (17%)

Query: 221 RKWSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAV----IPRRA 273
           R W +   P D  + + V  P GG     VLV   N ++Y +Q    + AV     P   
Sbjct: 296 RLWFQTGLPYDAYSLLAVPSPIGG-----VLVLCANSILYYSQVSTCIVAVNELATPPAG 350

Query: 274 DL--PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPV 331
            L  P  +  + + AA     +    LL T+ G +  + L  D  +V  L++       +
Sbjct: 351 SLEMPRSKFSIELDAAHATWLSYDAALLSTKTGMLVHLHLIFDGRNVQRLELSKSKGSVL 410

Query: 332 TASMCVLKSGYLFAASEFGNHALYQFQAIGA------------DPDVEASSSTLMETEEG 379
           ++S+C +   + F  S  G+  L QF +               D  V  S    ++ +  
Sbjct: 411 SSSLCTIGDKFFFVGSRLGDSLLVQFGSASTSNSLEHSYDGEDDIMVRPSKRMRLDDDAS 470

Query: 380 FQPVFFQPRGL----KNLVRIEQVE----SLMPIMDMRIANLFEEEAP----QIFTLCGR 427
            Q ++    G+    KN+  +  V     ++ PI D+   +    E P     +   CG 
Sbjct: 471 EQSLYQYKSGVSDSQKNMNFLFSVRDSLCNIGPIRDITCRSQNPSEQPGSAQDLIACCGH 530

Query: 428 GPRSSLRIL----RP------GLAVSEMAVS-------QLPGVPSAVWTVKKNV------ 464
           G   SL I+    RP       +++   AV+       +LPG    VWTV          
Sbjct: 531 GKNGSLNIISRSIRPDFITQANMSLLFFAVAYALFFQVKLPGC-VGVWTVYHRSGQIPAE 589

Query: 465 NDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAV-SLIGDDSLMQVHPSGI 522
            DE+ AY+++S  + T+VL  GET+ EV+DS  +    PS++  +L G   + QV+  G+
Sbjct: 590 KDEYHAYLIISLESRTMVLETGETLGEVTDSVEYYTEGPSISAGNLFGRRRIAQVYQKGV 649

Query: 523 R 523
           R
Sbjct: 650 R 650



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 119/547 (21%), Positives = 214/547 (39%), Gaps = 89/547 (16%)

Query: 701  VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYA-ASFSSDQCVEGVVSVAGNA--- 756
            VGG   +     +P    I R +  L P + +    A  S  +  C  G++ V   A   
Sbjct: 910  VGGLQGLFLAGGKPTWLMIFREQIRLHPQASDGPIVAFTSLHNVNCQHGLIYVTNEASLK 969

Query: 757  -LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECF 815
              R+  I      +    +PL+ TP +    P   + V++        +           
Sbjct: 970  ICRLSNILNYDNDWPVQKIPLKGTPHQMAHHPDLNIYVLV-------LSFSVSVPTSLVL 1022

Query: 816  EAAGMGENGNGNMDQMENGD--DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN-- 871
             +A  G  G+  +DQ E  D  D  K   + D +              +R+L+P +    
Sbjct: 1023 PSAADGPPGH-QIDQSEASDGLDPQKMVQVDDFE--------------VRLLEPMAQGVP 1067

Query: 872  --TTCLLELQDNEAAFSICTVNFHD---KEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIY 925
              T   ++ Q  E   ++  V+  +   ++   LLA+GT     +    ++ + G I + 
Sbjct: 1068 WETKDTIKFQPAENVLTVRIVSIKNAATEQVENLLAIGTG----YLQGEDVASRGRIILV 1123

Query: 926  RFVEEGKSLEL----LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
               E+    ++    L+  +++G   AL   QG LL  IGP + L+      L+      
Sbjct: 1124 SLGEDPSDPKVWAKELYSKELKGAISALAALQGHLLLAIGPKIILHTWNGSELI---GTA 1180

Query: 982  LF--PNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD--SVPRWLTAAHHID 1037
             F  P  +VS+N  ++ +  GD  +S +F  ++ +  QL + A D  S+  + T    ID
Sbjct: 1181 FFDAPLYVVSLNIVKNFVLFGDFHKSIYFLCWKEEGAQLVLLAKDFGSLDCYAT-EFLID 1239

Query: 1038 FDTMA--GADKFGNI-YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHV 1094
              T++   +D   NI  F   P++               W+  KL   P      V+FH+
Sbjct: 1240 GSTLSLLVSDSRKNIQVFSYAPKNAE------------SWKGQKL--LPR-----VEFHL 1280

Query: 1095 GDVVTSLQKASLV--PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ---EH 1149
            G  VT   +  ++  PG   +  +    G+L   + + +  D   F  L+   R+     
Sbjct: 1281 GSHVTKFLRLQMLQTPGSSRTNRFALCFGTLDGGIGYITPLDELTFRRLQTLQRKLVDLV 1340

Query: 1150 PPLCGRDHMAYRS--------AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEI 1201
            P + G +  AYR          + P  + +D +   ++ +LSLD Q  IA ++  T  +I
Sbjct: 1341 PHVAGLNPKAYRQFQANGEHHKHGP-DNTVDSEQLREYESLSLDKQVAIARQIGTTRQQI 1399

Query: 1202 LKKLEEI 1208
               L +I
Sbjct: 1400 FANLRDI 1406


>gi|425777692|gb|EKV15851.1| UV-damaged DNA binding protein, putative [Penicillium digitatum
           Pd1]
 gi|425779888|gb|EKV17916.1| UV-damaged DNA binding protein, putative [Penicillium digitatum
           PHI26]
          Length = 1140

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 122/591 (20%), Positives = 233/591 (39%), Gaps = 66/591 (11%)

Query: 222 KWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGV 281
           ++ + +D G++ L+ +P       G++V  E  + Y +    DV   I R  +   E  V
Sbjct: 239 EFGQELDLGSSHLIPIPAP---LGGLIVLGETSIKYIDDNANDV---ITRHLE---EATV 289

Query: 282 LIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN-EHVSELKIKYFDTIPVTASMCVLKS 340
            +       Q+    +LL  +YG +F ++   +N   + + K++        + +  L  
Sbjct: 290 FVAWEKVDSQR----WLLADDYGRLFFLSFILNNLGEIDDWKLESLGKTARASVLVYLGG 345

Query: 341 GYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVF-FQPRGLKNLVRIEQV 399
           G LF  S  G+  + +         ++ +S  +++T     P+  F    L N     Q 
Sbjct: 346 GMLFVGSHHGDSQVLR---------LDGTSFEVIQTLSNIAPILDFTIMDLGNRTNESQT 396

Query: 400 ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
                         F     +I T  G     +LR LR G+ + ++ V       S +W 
Sbjct: 397 HE------------FSSGQARIVTGSGAFDDGTLRSLRSGVGMEDLGVLGEMEHISDLWG 444

Query: 460 VKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTTPS--LAVSLIGDDSL 514
           ++     ++   ++V+F + T V      GE VEE+ +   L  T S  LA  L G   L
Sbjct: 445 LQTRSTGDYLDTLIVTFVDETRVFQFSPDGE-VEELDNFLGLSLTESTLLATRLQGGRIL 503

Query: 515 MQVHPSGIRHIREDGR-INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLL 573
                  +    E G  I EW    ++ I  V +N   +V+ +SG  +  F++    Q++
Sbjct: 504 QVTEQRALVADLESGMVIFEWVPQDQKLITAVSTNEDHLVLVISGQIVASFDIRDNVQII 563

Query: 574 EVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP 633
           +++       ++ L + S P G      + +  +  + ++  LD  D   +L  +S+  P
Sbjct: 564 KLKDLGADQQISGLTVPSTPTG------VFIAGFPQSAKVSILDIKD-FAVLQTKSLGPP 616

Query: 634 ----PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFL 689
               P S+L  EV         A+   +LF++  + +G +    +D     LS+     L
Sbjct: 617 GESFPRSVLVAEVL--------ANSQPTLFIS--MADGCVITFSLDSRDCSLSEMNKLIL 666

Query: 690 GLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEG 748
           G   P    +  G G   +      P L Y   GR + + ++ +        +++   + 
Sbjct: 667 GSEQPIFKKLPKGDGLYNVFATCENPSLIYGSEGRIIYSAVNSDGASRVCHLNAEAYPDS 726

Query: 749 VVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQ 799
           +       L++  ++R   T  +T LP+  T RR    P +K   I   D+
Sbjct: 727 IAVATEKELKIALVDRERTTQIQT-LPMGSTVRRVAYSPSEKAFGIGTIDR 776


>gi|410987992|ref|XP_004000273.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Felis catus]
          Length = 1432

 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 117/575 (20%), Positives = 220/575 (38%), Gaps = 105/575 (18%)

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
           E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 52  EHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 111

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 112 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 171

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +  G D  +   ++L +             E +Q   G+ A   Q   
Sbjct: 172 QRSSFLPSYIIDVR-GLDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 229

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  
Sbjct: 230 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSV 284

Query: 263 PDVRAVI------PRRADLPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 285 PPYGVALNGLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 344

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA---- 368
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A    
Sbjct: 345 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREA 402

Query: 369 -------SSSTLMETEEGFQPVFFQPRGLKNLVRI----------------EQVESLMPI 405
                  S    +++  G+      P+   + + +                E  +S++ I
Sbjct: 403 ADKEEPPSKKKRVDSTVGWSGGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNI 462

Query: 406 MDMRIANLFE--------EEAPQ----IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
                A + E        + +P+    I    G G   +L +L+  +    +   +LPG 
Sbjct: 463 GPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC 522

Query: 454 PSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGETV 489
              +WTV   V  E +                         ++++S  ++T++L  G+ +
Sbjct: 523 -YDMWTVIAPVRKEQEETSKGEGAEQEPSTLEAEDDGRRHGFLILSREDSTMILQTGQEI 581

Query: 490 EEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
            E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 582 MELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 616


>gi|402577494|gb|EJW71450.1| hypothetical protein WUBG_17643 [Wuchereria bancrofti]
          Length = 85

 Score = 67.8 bits (164), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 44/65 (67%)

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRL 1055
            RI V D QES HF +Y++ + QL IF D++ PR++T    +D+DT+A  D+FGNI  V L
Sbjct: 4    RIVVSDSQESVHFMRYKKQDGQLSIFCDETSPRYVTCVCLLDYDTVAVGDRFGNIAVVSL 63

Query: 1056 PQDVS 1060
              +++
Sbjct: 64   ISNIA 68


>gi|345779232|ref|XP_532356.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Canis lupus familiaris]
          Length = 1460

 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 117/575 (20%), Positives = 219/575 (38%), Gaps = 105/575 (18%)

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
           E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 80  EHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 139

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 140 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 199

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +  G D  +   ++L +             E +Q   G+ A   Q   
Sbjct: 200 QRSSFLPSYIIDVR-GLDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 257

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  
Sbjct: 258 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSV 312

Query: 263 PDVRAVI------PRRADLPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 313 PPYGVALNGLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 372

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA---- 368
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A    
Sbjct: 373 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAAREA 430

Query: 369 -------SSSTLMETEEGFQPVFFQPRGLKNLVRI----------------EQVESLMPI 405
                  S    ++   G+      P+   + + +                E  +S++ I
Sbjct: 431 ADKEEPPSKKKRVDCAAGWSGGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNI 490

Query: 406 MDMRIANLFE--------EEAPQ----IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
                A + E        + +P+    I    G G   +L +L+  +    +   +LPG 
Sbjct: 491 GPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC 550

Query: 454 PSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGETV 489
              +WTV   V  E +                         ++++S  ++T++L  G+ +
Sbjct: 551 -YDMWTVIAPVRKEQEETSKGEVAEQESSALEAEDDGRRHGFLILSREDSTMILQTGQEI 609

Query: 490 EEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
            E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 610 MELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 644


>gi|255539681|ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
 gi|223550020|gb|EEF51507.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 117/551 (21%), Positives = 219/551 (39%), Gaps = 89/551 (16%)

Query: 701  VGGRAAMLCLSSRPWLGYIHRGRFLLTP-LSYETLEYAASFSSDQCVEGVVSVAGNA-LR 758
            + G      L SRP    + R R  + P L   ++       +  C  G++ V     L+
Sbjct: 950  ISGHQGFFLLGSRPAWFMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGNLK 1009

Query: 759  VFTIERLGETFNE---TALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECF 815
            +  +       N      +PL+ TP +    P+K L  +I +        +  ++  +  
Sbjct: 1010 ICQLPSFSNYDNYWPVQKIPLKGTPHQVTYFPEKNLYPLIVSVPVHKPVNQVLSSLVDQ- 1068

Query: 816  EAAGMGENGNGNMDQMENGDDENKYDP--LSDEQYGYPKAESDKWVSCIRVLDPRSANTT 873
            E     EN N + D++       +++   L  E  G P      W             T 
Sbjct: 1069 EVGHQIENHNLSSDELLQTYSVEEFEVRILESENGGGP------W------------QTK 1110

Query: 874  CLLELQDNEAAFSICTV---NFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFVE 929
              + +Q +E A ++  V   N   KE+ TLLA+GTA    +    ++ A G + ++  V+
Sbjct: 1111 ATIPMQSSENALTVRVVTLFNATTKENETLLAIGTA----YVQGEDVAARGRVLLFSVVK 1166

Query: 930  EGKSLELL----HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPN 985
              ++ ++L    +  +++G   AL   QG LL   GP + L+      L         P 
Sbjct: 1167 STENSQVLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGTELNGVAFYDAPPL 1226

Query: 986  TIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD 1045
             + S+N  ++ I +GDI +S +F  ++    QL + A D                    D
Sbjct: 1227 YVASMNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKD----------------FGSLD 1270

Query: 1046 KFGNIYFV---RLPQDVSDEIEEDPTGGKIKWEQGKL--NGAPNKMEEIVQFHVGDVVTS 1100
             F   + +    L   VSDE +      +I +   K+  +    K+    +FHVG  +T 
Sbjct: 1271 CFATEFLIDGSTLSLVVSDEQKNI----QIFYYAPKMLESWKGQKLLSRAEFHVGAHITK 1326

Query: 1101 LQKASLV----------PGGGES----VIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMH 1144
              + S++          PG  ++    +++GT+ GS+G +      D++ F     L+  
Sbjct: 1327 FIRLSMLSTSSDRSGAAPGPDKTNRFALLFGTLDGSIGCIAPL---DELTFRRLQSLQRK 1383

Query: 1145 MRQEHPPLCGRDHMAYR------SAYFP-VKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
            +    P + G +  ++R        + P  + ++D +L   F  L L+ Q +IA ++  T
Sbjct: 1384 LVDAVPHVAGLNPRSFRQFRSDGKVHRPGPESIVDCELLSHFEMLPLEEQLEIAQQVGTT 1443

Query: 1198 PGEILKKLEEI 1208
              +IL  L ++
Sbjct: 1444 RAQILSNLNDL 1454


>gi|148697642|gb|EDL29589.1| cleavage and polyadenylation specific factor 1, isoform CRA_a [Mus
           musculus]
          Length = 1417

 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 130/635 (20%), Positives = 235/635 (37%), Gaps = 122/635 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+   +  NF       +VVA    L + R         +N G     
Sbjct: 28  MYAVYKQAHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 87

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 88  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 147

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 148 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 207

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 208 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 265

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  
Sbjct: 266 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSV 320

Query: 263 PDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 321 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 380

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAI-----------G 361
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++               
Sbjct: 381 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREA 438

Query: 362 ADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI----------------EQVESLMPI 405
           AD +   S    +E   G+      P+   + + +                E  +S++ I
Sbjct: 439 ADKEEPPSKKKRVEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNI 498

Query: 406 MDMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
                A + E        + +P    +I    G G   +L +L+  +    +   +LPG 
Sbjct: 499 GPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC 558

Query: 454 PSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGETV 489
              +WTV   V  E +                         ++++S  ++T++L  G+ +
Sbjct: 559 -YDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTGQEI 617

Query: 490 EEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
            E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 618 MELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 652


>gi|351713968|gb|EHB16887.1| Cleavage and polyadenylation specificity factor subunit 1
           [Heterocephalus glaber]
          Length = 1440

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 132/638 (20%), Positives = 240/638 (37%), Gaps = 128/638 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-----------------P 43
           MY        PTG+  A+  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEGLTKNDKTTEGK 60

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
            +  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  SHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             +D  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE 316
                +           L  + GV I +  A     +    ++  + G+I+ +TL  D  
Sbjct: 295 PYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG- 353

Query: 317 HVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTL 373
            +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +ST+
Sbjct: 354 -MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PASTV 408

Query: 374 METEEGFQPVFFQPR--------GLKNLVR--IEQVE----------------------- 400
            E  +  +P   + R        G K + +  ++++E                       
Sbjct: 409 REAADKEEPPSKKKRVDSAAGWAGNKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSM 468

Query: 401 -SLMPIMDMRI---ANLFEE--EAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
            ++ P  +  +   A L EE   +P    +I    G G   +L +L+  +    +   +L
Sbjct: 469 LNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFEL 528

Query: 451 PGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIG 486
           PG    +WTV   V  E +                         ++++S  ++T++L  G
Sbjct: 529 PGC-YDMWTVIAPVRKEEEETPKAEGSEQEPSAPEAQDDGRRHGFLILSREDSTMILQTG 587

Query: 487 ETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           + + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 588 QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 625


>gi|301773406|ref|XP_002922132.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 1-like [Ailuropoda
           melanoleuca]
          Length = 1469

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 117/575 (20%), Positives = 219/575 (38%), Gaps = 105/575 (18%)

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
           E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 99  EHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 158

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 159 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 218

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +  G D  +   ++L +             E +Q   G+ A   Q   
Sbjct: 219 QRSSFLPSYIIDVR-GLDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 276

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  
Sbjct: 277 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSV 331

Query: 263 PDVRAVI------PRRADLPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 332 PPYGVALNGLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 391

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA---- 368
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A    
Sbjct: 392 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREA 449

Query: 369 -------SSSTLMETEEGFQPVFFQPRGLKNLVRI----------------EQVESLMPI 405
                  S    +++  G+      P+   + + +                E  +S++ I
Sbjct: 450 ADKEEPPSKKKRVDSTVGWSGGKSMPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNI 509

Query: 406 MDMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
                A + E        + +P    +I    G G   +L +L+  +    +   +LPG 
Sbjct: 510 GPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC 569

Query: 454 PSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGETV 489
              +WTV   V  E +                         ++++S  ++T++L  G+ +
Sbjct: 570 -YDMWTVIAPVRKEQEETPKGEGAEQEPSALEADDDGRRHGFLILSREDSTMILQTGQEI 628

Query: 490 EEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
            E+  SGF    P++    IGD   ++QV P GIR
Sbjct: 629 MELDTSGFATQGPTVFAGNIGDSRYIVQVSPLGIR 663


>gi|401414965|ref|XP_003871979.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488200|emb|CBZ23446.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 1982

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 114/308 (37%), Gaps = 97/308 (31%)

Query: 151 LTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQ----------------- 193
           + + +P+E  +  T++YS+C +D   D+ +FA +E +  EA                   
Sbjct: 315 INLGTPIEMQR-QTVLYSVCALDGYLDHAVFAVLEEEVIEARGAAAASASNPANAAAAAA 373

Query: 194 --------DSTG--QAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDG 243
                    S+G   A  +  K+   Y     L  V R     V   A+ L+ VP    G
Sbjct: 374 EASGGTFLKSSGGPNAVVQRHKHFVLYAYVPSLKQVQRTQLVHVPATAHRLIAVPAAPYG 433

Query: 244 PSGVLVCAENFVIY----KNQGHPDVRA------------VIPRRADLPAERGVLIVSAA 287
           P GVLVC +  +I+      Q      A              PRR D        I+   
Sbjct: 434 PGGVLVCTDTELIWYDVSATQQQNSAAAANGRVGVFKCTYAFPRRLDC-----TEILYDP 488

Query: 288 THRQKTL------FFFLLQTEYGDIFKVTLEH-DNEHVSE-------------------- 320
           +  Q TL      FF LLQ E GD+++V LE  D +   E                    
Sbjct: 489 SIIQHTLTCFGRRFFMLLQDEQGDVYRVFLEAGDVQRAYEALRTRELAQANPEFFLQQQQ 548

Query: 321 --------------------LKIKYFDTIPVTASMCVLKSGYLFAASEFGN-HALYQFQA 359
                               L + YFDT+P +++M + + G+LF  SE G  H LY+ ++
Sbjct: 549 QQVANGGVAPAPTLPPVPNPLSVHYFDTLPPSSAMALFRRGFLFMGSEAGPLHGLYKVKS 608

Query: 360 IGADPDVE 367
            G   D E
Sbjct: 609 NGYTADRE 616



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 30/209 (14%)

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE---DPTGGKIKWEQGKLN 1080
            DSVPR +T+   +D  T+A +D+FG + F+R+P+    +  +        ++  E+  L 
Sbjct: 1760 DSVPRHITSVVAVDERTIAASDRFGTVVFLRIPETTRTQFAQPVHQLQEAELLAEETYLR 1819

Query: 1081 GAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES-------VIYGTVMGSLGAMLAFSSRD 1133
                   E+ + HVG++VT+L      P  G         V Y T +GS+GA +   S +
Sbjct: 1820 -TKQTFREVARHHVGELVTALHVQPYDPSQGTDAALATNIVYYSTALGSIGAYVPLLSEE 1878

Query: 1134 DVDFFSHLE----MHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF-----PTLSL 1184
            D    ++L+     HMR    P       ++ S +     V+DGD+ +          S 
Sbjct: 1879 DGALAAYLQPLLHSHMRPLLGPPPPLPPASHLSHH-----VVDGDVAQLLRGGATTPFSA 1933

Query: 1185 DLQRKIADELDRTPGEILKKLEEIRNKIV 1213
              + +IADEL+R       K+E  R  ++
Sbjct: 1934 AAKDEIADELERQ-----VKIEAARRNVL 1957



 Score = 40.8 bits (94), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query: 95  KNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQK 138
           K  F K+ +   G+SG R  VPG  +AVDP G A++I A  + K
Sbjct: 195 KGRFIKVSEVCLGRSGARLTVPGARMAVDPAGTALLITALMRTK 238


>gi|327301962|ref|XP_003235673.1| UV-damaged DNA binding protein [Trichophyton rubrum CBS 118892]
 gi|326461015|gb|EGD86468.1| UV-damaged DNA binding protein [Trichophyton rubrum CBS 118892]
          Length = 1147

 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 214/1031 (20%), Positives = 392/1031 (38%), Gaps = 175/1031 (16%)

Query: 224  SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLI 283
            S+ VD GA++L+ VP       G+L+  E+ + Y +    +    I R     AE  V +
Sbjct: 244  SDEVDLGASILIPVP---RPLGGLLIIGESSIKYVDVSRNET---ISRPL---AESTVFV 294

Query: 284  VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKSGY 342
                   Q+    +LL  +YG +F + L  D ++ V   K+ +       + +  L  G 
Sbjct: 295  AWEQVDGQR----WLLADDYGRLFFLMLVLDADNAVESWKVDFLGVTSRASVLVYLDGGI 350

Query: 343  LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            +F  S  G+  + Q +                  E GF  V             + + ++
Sbjct: 351  VFVGSHQGDSQVIQIK------------------EGGFDLV-------------QTISNI 379

Query: 403  MPIMDMRIANL---------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
             PI+D  I ++         F     +I T  G     SLR +R G+ + E+ V      
Sbjct: 380  APILDFTIMDMGDRSGATREFSSGQTRIVTGSGAFGDGSLRSVRSGVGIEELGVLASMEH 439

Query: 454  PSAVWTVKKNVNDEFDAYIVVSFNNATLVL--SIGETVEEVSDS--GFLDTTPSLAVSLI 509
             + +W ++    + F   ++VSF N T V   S    VEE  D   G + +  +L  + I
Sbjct: 440  ITDLWALRSACPEPFFDTLLVSFVNETRVFHFSADGDVEEKEDGFLGLVFSESTLLATNI 499

Query: 510  GDDSLMQVHPSGIRHIREDGRINEWRTPGKR-TIVKVGSNRLQVVIALSGGELIYFEVDM 568
              + ++QV  S  R I  D  +  WR+  +  TI    +N   +V+ L G  L+   +  
Sbjct: 500  PGNRILQVTESISRAIDVDSGMIIWRSSYEEFTITSASANDDYLVLVLGGTRLVCISLS- 558

Query: 569  TGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQ 628
            T +L+     E    V+ + I + P          +     +  I+ LD    +++ + Q
Sbjct: 559  TFELVGSRDFEADNQVSGMTIPASPIQA------CIVCLPQSAEIIILDLPG-LEVKNKQ 611

Query: 629  SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRF 688
            ++  P E++     ++ +  E   + P +LF++  + +G +F    D+    + +S    
Sbjct: 612  TLGEPGEAI----PRSVIVAEILPNKPPTLFVS--MADGTVFSFSFDVHAFAIFNSSKIT 665

Query: 689  LGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVE 747
            LG   P    +  G G+  +      P L +   GR + + +   +     S ++ Q   
Sbjct: 666  LGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEGRIVYSAVDSASASRICSLNT-QAYP 724

Query: 748  GVVSVAG-NALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEE 806
            G ++++  + L++  ++    T   T LP+  + RR    P +K                
Sbjct: 725  GSIALSSQHELKIAIVDEERTTQIHT-LPMHASVRRLAYSPTEK---------------- 767

Query: 807  REAAKKECFEAAGMGENGNGNMDQMENGDDE-NKYDPLSDEQYGYPKAESDKWVSCIRVL 865
                      A G+G        ++ NG +E +    L+DE    P +  D        L
Sbjct: 768  ----------AFGLGTVKR----KISNGVEEVSSSFVLADEILFRPLSTYD--------L 805

Query: 866  DPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPK--RNIVAGYIH 923
             P      C++  Q N     +      D     L  VGTA    F      + + G I 
Sbjct: 806  RPDEL-VECVIRSQLNHGKDEVGNSISKD-----LFFVGTA----FLDDVGDDHIRGRIL 855

Query: 924  IYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLL-AGIGPVLRLYDLGKKR----LLRKC 978
            ++  V   + L L+ +  + G    L      LL AG+   + ++ L + R    LL K 
Sbjct: 856  VFE-VNRSRELSLIVEKSLMGACRTLAVMDHTLLVAGLVKSVSVFKLARDRFGNILLEKH 914

Query: 979  ENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN-----QLYIFADDSVPRWLTAA 1033
                     + I+   D + V D+ +S    +Y + E      +    A      W TA 
Sbjct: 915  TAYRTSTAPIDISVVGDTVAVADVMKSMSLVQYTQAEEGEREPKFEEIARHYQTLWSTAV 974

Query: 1034 HHIDFDTMAGADKFGNIYFVRLPQDVSDEIEED-----PTGGKIKWEQGKLNGAPNKMEE 1088
              I+ +    AD  GN+  V L Q+++   E D     PT       + +L    N++  
Sbjct: 975  APIEENVYLLADAEGNL--VVLQQNITGVTESDRKRLQPTS------EIRLGEMVNRIHP 1026

Query: 1089 IV-QFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ 1147
            IV Q +    V++  +A L    G   ++G +  +            +D    L+  M  
Sbjct: 1027 IVIQTYTETAVSA--RALLATVDGSIYLFGLINPTY-----------IDLLLRLQTAMGS 1073

Query: 1148 ---EHPPLCGRDHMAYRSAYFPVKD---VIDGDLCEQFPTLSLDLQRKIADELDR---TP 1198
                   +    + A+R+      +    +DG+L E+F + +  +Q +I   LD    T 
Sbjct: 1074 ITISPGEIPFSKYRAFRTTVHQSDEPFRFVDGELIERFLSCTPGMQEEIVSRLDDSTVTV 1133

Query: 1199 GEILKKLEEIR 1209
              + + +EE+R
Sbjct: 1134 SSLKEMIEELR 1144


>gi|158287218|ref|XP_309311.4| AGAP011340-PA [Anopheles gambiae str. PEST]
 gi|157019545|gb|EAA05261.4| AGAP011340-PA [Anopheles gambiae str. PEST]
          Length = 1434

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 124/563 (22%), Positives = 213/563 (37%), Gaps = 97/563 (17%)

Query: 42  RPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKI 101
           RP N  ++E + S  + G I+S+    L GS +D +++     ++ +++++P       +
Sbjct: 59  RPPNM-KLECVASYRLNGNIKSMQSVSLAGSLRDALLISFPDAKLSVVQFDPDNFDLKTL 117

Query: 102 HQETFGKSGCRRIVPGQY----LAVDPKGRAVMIGACEKQKLVYVLNRDTA--------A 149
               F     R    G Y    + VDP  R  ++    ++ +V    +D++         
Sbjct: 118 SLHYFEDEDIRGGWTGHYHIPMVRVDPDNRCAVMLVYGRKLVVLPFRKDSSLDEIELQDV 177

Query: 150 RLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASE------- 202
           +    +P++      I+ S        D  I   I++ +     + T     E       
Sbjct: 178 KPIKKAPMQLVAKTPILASYIIELKDLDEKIDNVIDIQFLHGYYEPTLLILYEPVRTFPG 237

Query: 203 --AQKNLTFYELDLGLNHVSRK----W---SEPVDNGANMLVTVPGGGDGPSGVLVCAEN 253
             A ++ T   + L LN   R     W   S P D    + +  P GG      LV   N
Sbjct: 238 RIAVRSDTCTMVALSLNIQQRVHPVIWTVNSLPFDCIQAIPINKPIGG-----CLVMCVN 292

Query: 254 FVIYKNQGHPDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFF----FLLQTEY 303
            +IY NQ  P     +   AD      L  + GV I   A    +  F      +L  + 
Sbjct: 293 SLIYLNQSVPPYGVSLNSSADHSTSFPLKPQDGVRISLDAA---QVCFIEPEKLVLSLKG 349

Query: 304 GDIFKVTLEHDN-EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGA 362
           G+++ +TL  D+   V            +T+ +CV +  YLF  S  GN  L +F+    
Sbjct: 350 GELYVLTLCADSMRSVRNFHFNKAAASVLTSCICVCEDEYLFLGSRLGNSLLLRFKEKDE 409

Query: 363 DPDVEASSSTLMETEEGFQPVFFQPR-----------GLKNLVRI--------EQVESLM 403
              +    S  +E E        +PR           G K  V++        + V ++ 
Sbjct: 410 SLVITIDDSGAVEKEPK------RPRLEEEELEVYGSGYKTSVQLTSYIFEVCDNVLNIG 463

Query: 404 PIMDM----RIANLFEEEAP-----------QIFTLCGRGPRSSLRILRPGLAVSEMAVS 448
           PI  M    R+A    E  P           ++ T  G G   +L +L+  +    +   
Sbjct: 464 PIAHMAVGERVAEEDAENQPDVQIVQNKLDIEVVTSSGHGKNGALCVLQSSIKPQVITSF 523

Query: 449 QLPGVPSAVWTV-----KKNVND--EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTT 501
            L G    VWTV      +   D     A++++S    T+VL  GE + E+ ++GF  T 
Sbjct: 524 GLSGCVD-VWTVFDEAVARRAEDGPSTHAFMILSQEGGTMVLQTGEEINEIENTGFATTV 582

Query: 502 PSLAVSLIGDDS-LMQVHPSGIR 523
           P++ V  IG +  ++QV    IR
Sbjct: 583 PTIHVGNIGTNRFIVQVTTKSIR 605



 Score = 42.7 bits (99), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 95/464 (20%), Positives = 178/464 (38%), Gaps = 68/464 (14%)

Query: 774  LPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN 833
            +PLR +P++ V   + K+  ++      + AEE       C            N     N
Sbjct: 1007 IPLRSSPKQIVYHRENKVYCVV------MDAEEI------C------------NKYYRFN 1042

Query: 834  GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFH 893
            G+D+   +    E++ YP       V            T+  LE  ++  A    ++ + 
Sbjct: 1043 GEDKELTEENKGERFLYPMGHRFSVVLVTPAAWEVVPETSINLEEWEHVIALKNVSLTYE 1102

Query: 894  DKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFVE----EGKSL------ELLHKTQV 942
                G  L    A G  F    +I + G + +Y  +E     GK L      E++ K Q 
Sbjct: 1103 GARSG--LKEYIAVGTNFNYSEDITSRGRLLLYDIIEVVPEPGKPLTKHKFKEVIVKDQ- 1159

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC--ENKLFPNTIVSINTYRDRIYVG 1000
            +G   A+    G L+  +G  + L+ +    L+     +  +F + +VSI   +  I V 
Sbjct: 1160 KGPVSAISHVCGFLVGAVGQKVYLWQMKDDDLVGVAFIDTNIFVHQMVSI---KSLILVA 1216

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI----DFDTMAGADKFGNIYFVRLP 1056
            D+ +S    +++ +   L + + D  P  +    ++    +   +   D+   I ++  P
Sbjct: 1217 DVYKSVSLLRFQEEYRTLSVVSRDYHPLNVFQVEYVVDNANLGFLVSDDQCNLITYMYQP 1276

Query: 1057 QDVSDEIEEDPTGGK--IKWEQGKLNGAPNKMEEI-VQFHVGDVVTSLQKASLVPGGGES 1113
            +        +  GG+  ++     L    N M  +   FH  DV+    K +L      +
Sbjct: 1277 ES------RESFGGQRLLRKSDYHLGQQVNCMFRVQCDFHETDVM----KRTLNYDNKHT 1326

Query: 1114 VIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-------AYFP 1166
              + T+ G +G +L    +     F  L+  +    P  CG +  AYR+          P
Sbjct: 1327 TFFATLDGGIGFVLPLPEKTYRRLF-MLQNVLLTHSPHTCGLNPKAYRTIKQTRKLPINP 1385

Query: 1167 VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
             + V+DGDL   F  L  + + ++A ++     EI   L EI +
Sbjct: 1386 SRCVVDGDLVWSFLELPANEKHEVAKKIGTRIEEICADLMEIEH 1429


>gi|338728511|ref|XP_001505047.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like isoform 1 [Equus caballus]
          Length = 1444

 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 132/641 (20%), Positives = 237/641 (36%), Gaps = 131/641 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR------------------ 42
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEAPTKNDRNAEGK 60

Query: 43  --PENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK 100
              E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    
Sbjct: 61  AHREHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKT 120

Query: 101 IHQETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSP 156
           +    F     + G  + V    + VDP GR   +     + +V    R++ A       
Sbjct: 121 LSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLM 180

Query: 157 LEAHKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
            E  +S  +   I             +D  F +  +    L   E +Q   G+ A   Q 
Sbjct: 181 GEGQRSSFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QD 239

Query: 206 NLTFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
             +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ
Sbjct: 240 TCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQ 294

Query: 261 GHPDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEH 313
             P     +           L  + GV I +  A     +    ++  + G+I+ +TL  
Sbjct: 295 SVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLIT 354

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASS 370
           D   +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +
Sbjct: 355 DG--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PA 408

Query: 371 STLMETEEGFQPVFFQPR--------GLKNLVR-----------------------IEQV 399
           S + E  E  +P   + R        G K++ +                        E  
Sbjct: 409 SAVREAAEKEEPPSKKKRVDSTVGWSGGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVC 468

Query: 400 ESLMPIMDMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAV 447
           +S++ I     A + E        + +P    +I    G G   +L +L+  +    +  
Sbjct: 469 DSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTT 528

Query: 448 SQLPGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVL 483
            +LPG    +WTV   V  E +                         ++++S  ++T++L
Sbjct: 529 FELPGC-YDMWTVIAPVRKEQEETPKGEGTEQEPSAPEADDDGRRHGFLILSREDSTMIL 587

Query: 484 SIGETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
             G+ + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 588 QTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 628


>gi|16751835|ref|NP_444423.1| cleavage and polyadenylation specificity factor subunit 1 isoform 2
           [Mus musculus]
 gi|17374611|sp|Q9EPU4.1|CPSF1_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
           subunit 1; AltName: Full=Cleavage and polyadenylation
           specificity factor 160 kDa subunit; Short=CPSF 160 kDa
           subunit
 gi|11762096|gb|AAG40326.1|AF322193_1 cleavage and polyadenylation specificity factor 1 [Mus musculus]
 gi|38614159|gb|AAH56388.1| Cleavage and polyadenylation specific factor 1 [Mus musculus]
          Length = 1441

 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 131/634 (20%), Positives = 234/634 (36%), Gaps = 120/634 (18%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+   +  NF       +VVA    L + R         +N G     
Sbjct: 1   MYAVYKQAHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE 316
                +           L  + GV I +  A     +    ++  + G+I+ +TL  D  
Sbjct: 295 PYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG- 353

Query: 317 HVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAI-----------GA 362
            +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++               A
Sbjct: 354 -MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAA 412

Query: 363 DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI----------------EQVESLMPIM 406
           D +   S    +E   G+      P+   + + +                E  +S++ I 
Sbjct: 413 DKEEPPSKKKRVEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIG 472

Query: 407 DMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP 454
               A + E        + +P    +I    G G   +L +L+  +    +   +LPG  
Sbjct: 473 PCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC- 531

Query: 455 SAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGETVE 490
             +WTV   V  E +                         ++++S  ++T++L  G+ + 
Sbjct: 532 YDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTGQEIM 591

Query: 491 EVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 592 ELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 625


>gi|255918233|ref|NP_001157645.1| cleavage and polyadenylation specificity factor subunit 1 isoform 1
           [Mus musculus]
          Length = 1450

 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 130/635 (20%), Positives = 235/635 (37%), Gaps = 122/635 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+   +  NF       +VVA    L + R         +N G     
Sbjct: 1   MYAVYKQAHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 353

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAI-----------G 361
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++               
Sbjct: 354 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREA 411

Query: 362 ADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI----------------EQVESLMPI 405
           AD +   S    +E   G+      P+   + + +                E  +S++ I
Sbjct: 412 ADKEEPPSKKKRVEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNI 471

Query: 406 MDMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
                A + E        + +P    +I    G G   +L +L+  +    +   +LPG 
Sbjct: 472 GPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC 531

Query: 454 PSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGETV 489
              +WTV   V  E +                         ++++S  ++T++L  G+ +
Sbjct: 532 -YDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTGQEI 590

Query: 490 EEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
            E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 591 MELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 625


>gi|302814354|ref|XP_002988861.1| hypothetical protein SELMODRAFT_184138 [Selaginella moellendorffii]
 gi|300143432|gb|EFJ10123.1| hypothetical protein SELMODRAFT_184138 [Selaginella moellendorffii]
          Length = 1413

 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 152/361 (42%), Gaps = 64/361 (17%)

Query: 221 RKWSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAV----IPRRA 273
           R W +   P D  + + V  P GG     VLV   N ++Y +Q    + AV     P   
Sbjct: 296 RLWFQTGLPYDAYSLLAVPSPIGG-----VLVLCANSILYYSQVSTCIVAVNELATPPAG 350

Query: 274 DL--PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPV 331
            L  P  +  + + AA     +    LL T+ G +  + L  D  +V  L++       +
Sbjct: 351 SLEMPRSKFSIELDAAHATWLSYDAALLSTKTGMLVHLHLIFDGRNVQRLELSKSKGSVL 410

Query: 332 TASMCVLKSGYLFAASEFGNHALYQF----------QAIGADPDVEASSSTLMETEE-GF 380
           ++S+C +   + F  S  G+  L QF          Q+   + D+    S  M  ++   
Sbjct: 411 SSSLCTIGDMFFFVGSRLGDSLLVQFGSASTSNSLSQSYDGEDDIMVRPSKRMRLDDDAN 470

Query: 381 QPVFFQPRGL-----KNLVRIEQVE----SLMPIMDM--RIANLFEE--EAPQIFTLCGR 427
           +   +Q +       KN+  +  V     ++ PI D+  R  N  E+   A  +   CG 
Sbjct: 471 EQSLYQYKSAVSDSQKNMNFLFSVRDSLCNIGPIRDITGRSQNPSEQPGSAQDLIACCGH 530

Query: 428 GPRSSLRIL----RP------GLAVSEMAVS-------QLPGVPSAVWTVKKNV------ 464
           G   SL I+    RP       +++   AV+       +LPG    VWTV          
Sbjct: 531 GKNGSLNIISRSIRPDFITQANMSLLFFAVAYALFFQVKLPGC-VGVWTVYHRSGQIPAE 589

Query: 465 NDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAV-SLIGDDSLMQVHPSGI 522
            DE+ AY+++S  + T+VL  GET+ EV+DS  +    PS++  +L G   + QV+  G+
Sbjct: 590 KDEYHAYLIISLESRTMVLETGETLGEVTDSVEYYTEGPSISAGNLFGRRRIAQVYQKGV 649

Query: 523 R 523
           R
Sbjct: 650 R 650



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 119/547 (21%), Positives = 214/547 (39%), Gaps = 89/547 (16%)

Query: 701  VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYA-ASFSSDQCVEGVVSVAGNA--- 756
            VGG   +     +P    I R +  L P + +    A  S  +  C  G++ V   A   
Sbjct: 910  VGGLQGLFLAGGKPTWLMIFREQIRLHPQASDGPIVAFTSLHNVNCQHGLIYVTNEASLK 969

Query: 757  -LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECF 815
              R+  I      +    +PL+ TP +    P   + V++        +           
Sbjct: 970  ICRLSNILNYDNDWPVQKIPLKGTPHQMAHHPDLNIYVLV-------LSFSVSVPTSLVL 1022

Query: 816  EAAGMGENGNGNMDQMENGD--DENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSAN-- 871
             +A  G  G+  +DQ E  D  D  K   + D +              +R+L+P +    
Sbjct: 1023 PSAADGPPGH-QIDQSEASDGLDPQKMVQVDDFE--------------VRLLEPMAQGVP 1067

Query: 872  --TTCLLELQDNEAAFSICTVNFHD---KEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIY 925
              T   ++ Q  E   ++  V+  +   ++   LLA+GT     +    ++ + G I + 
Sbjct: 1068 WETKDTIKFQPAENVLTVRIVSIKNAATEQVENLLAIGTG----YLQGEDVASRGRIILV 1123

Query: 926  RFVEEGKSLEL----LHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENK 981
               E+    ++    L+  +++G   AL   QG LL  IGP + L+      L+      
Sbjct: 1124 SLGEDPSDPKVWAKELYSKELKGAISALAALQGHLLLAIGPKIILHTWNGSELI---GTA 1180

Query: 982  LF--PNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD--SVPRWLTAAHHID 1037
             F  P  +VS+N  ++ +  GD  +S +F  ++ +  QL + A D  S+  + T    ID
Sbjct: 1181 FFDAPLYVVSLNIVKNFVLFGDFHKSIYFLCWKEEGAQLVLLAKDFGSLDCYAT-EFLID 1239

Query: 1038 FDTMA--GADKFGNI-YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHV 1094
              T++   +D   NI  F   P++               W+  KL   P      V+FH+
Sbjct: 1240 GSTLSLLVSDSRKNIQVFSYAPKNAE------------SWKGQKL--LPR-----VEFHL 1280

Query: 1095 GDVVTSLQKASLV--PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ---EH 1149
            G  VT   +  ++  PG   +  +    G+L   + + +  D   F  L+   R+     
Sbjct: 1281 GSHVTKFLRLQMLQTPGSSRTNRFALCFGTLDGGIGYITPLDELTFRRLQTLQRKLVDLV 1340

Query: 1150 PPLCGRDHMAYRS--------AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEI 1201
            P + G +  AYR          + P  + +D +   ++ +LSLD Q  IA ++  T  +I
Sbjct: 1341 PHVAGLNPKAYRQFQANGEHHKHGP-DNTVDSEQLREYESLSLDKQVAIARQIGTTRQQI 1399

Query: 1202 LKKLEEI 1208
               L +I
Sbjct: 1400 FANLRDI 1406


>gi|441648592|ref|XP_004093268.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 1 [Nomascus leucogenys]
          Length = 1177

 Score = 67.0 bits (162), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 123/579 (21%), Positives = 219/579 (37%), Gaps = 90/579 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEHD 314
                +           L  + GV I       Q T   +   ++  + G+I+ +TL  D
Sbjct: 295 PYGVALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLITD 352

Query: 315 NEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSS 371
              +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +S
Sbjct: 353 G--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PAS 406

Query: 372 TLMETEEGFQPVFFQPRGLKNL-VRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPR 430
            + E  +  +P   + R    +    E  +S+ P    ++   F  E P  + +      
Sbjct: 407 AVREAADKEEPPSKKKRVDATVGWSGEGQKSIRP----QVVTTF--ELPGCYDMW----- 455

Query: 431 SSLRILRPGLAVSE-----MAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI 485
               ++ P     E         Q P  P A    +++       ++++S  ++T++L  
Sbjct: 456 ---TVIAPVRKEEEDNPKGEGTEQEPSTPEADDDCRRH------GFLILSREDSTMILQT 506

Query: 486 GETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           G+ + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 507 GQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 545


>gi|326694503|gb|AEA03529.1| splicing factor 3B subunit 3 [Kryptolebias marmoratus]
          Length = 51

 Score = 67.0 bits (162), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/51 (56%), Positives = 38/51 (74%)

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQK 1103
            VRLP + SD+++EDPTG K  W++G LNGA  K E +V +HVG+ V SLQK
Sbjct: 1    VRLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEVVVNYHVGETVLSLQK 51


>gi|398010156|ref|XP_003858276.1| hypothetical protein, conserved, partial [Leishmania donovani]
 gi|322496482|emb|CBZ31552.1| hypothetical protein, conserved, partial [Leishmania donovani]
          Length = 708

 Score = 67.0 bits (162), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 113/308 (36%), Gaps = 97/308 (31%)

Query: 151 LTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQ----------------- 193
           + + +P+E  +  T++YS C +D   D+ +FA +E +  EA                   
Sbjct: 314 INLGTPIEMQR-QTVLYSACALDGYLDHAVFAVLEEEIVEARDAAAASASNPANAAAAAV 372

Query: 194 --------DSTG--QAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDG 243
                    S+G   A  +  K+   Y     L  V R     V   A+ L+ VP    G
Sbjct: 373 EASGGTFLKSSGGPNAVVQRHKHFVLYAYVPSLKQVQRTQLVHVPATAHRLIAVPAAPYG 432

Query: 244 PSGVLVCAENFVIYKN------------------QGHPDVRAVIPRRADLPAERGVLIVS 285
           P GVLVC +  +I+ +                   G        PRR D        I+ 
Sbjct: 433 PGGVLVCTDTELIWYDVSATQQQQQNSAAAANGRVGVFKCTYAFPRRLDC-----TEILY 487

Query: 286 AATHRQKTL------FFFLLQTEYGDIFKVTLE-------HDNEHVSEL----------- 321
             +  Q TL      FF LLQ E GD+++V LE       ++     EL           
Sbjct: 488 DPSIIQHTLTCFGRRFFMLLQDEQGDVYRVFLEAGDVQRAYEALRTRELAQANPELFLQQ 547

Query: 322 ---------------------KIKYFDTIPVTASMCVLKSGYLFAASEFGN-HALYQFQA 359
                                 + YFDT+P +++M + + G+LF  +E G  H LY+ ++
Sbjct: 548 QLAANGGVAPAPALPPVPNPLSVHYFDTLPPSSAMALFRRGFLFIGNEAGPLHGLYKIKS 607

Query: 360 IGADPDVE 367
            G   D E
Sbjct: 608 NGYTADRE 615


>gi|357162146|ref|XP_003579318.1| PREDICTED: probable cleavage and polyadenylation specificity factor
            subunit 1-like [Brachypodium distachyon]
          Length = 1442

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/363 (21%), Positives = 153/363 (42%), Gaps = 51/363 (14%)

Query: 872  TTCLLELQDNEAAFSICTVNFHD---KEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRF 927
            T   + +Q  E A ++  V  H+   KE+ TL+A+GTA    +    ++ A G + ++ F
Sbjct: 1098 TRSTIPMQSFENALTVRIVTLHNTTTKENETLMAIGTA----YVQGEDVAARGRVLLFSF 1153

Query: 928  VEEGKSLELL---HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP 984
             +   S  L+   +  + +G   A+   QG L+   GP + L       L         P
Sbjct: 1154 TKSENSQNLVTEVYSKESKGAVSAVASLQGHLVIASGPKITLNKWNGSELTAVAFYDA-P 1212

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGA 1044
              +VS+N  ++ +  GDI +S +F  ++   +QL + A D                    
Sbjct: 1213 LHVVSLNIVKNFVLFGDIHKSVYFLSWKEQGSQLTLLAKD----------------FGSL 1256

Query: 1045 DKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL--NGAPNKMEEIVQFHVGDVVTSLQ 1102
            D F   + +     +S  + +     +I +   K+  +    K+    + HVG  +T   
Sbjct: 1257 DCFATEFLID-GSTLSLVVSDSDKNLQIFYYAPKMVESWKGQKLLSRAELHVGAHMTKFL 1315

Query: 1103 KASLVPGGGE--------SVIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMHMRQEHPPL 1152
            +  ++P  G         ++++GT+ GS+G +   +  D++ F     L+  +      +
Sbjct: 1316 RLQMLPAQGLASEKTNRFALLFGTLDGSIGCI---APVDELTFRRLQSLQRKLVDAVSHV 1372

Query: 1153 CGRDHMAYR------SAYFPVKD-VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKL 1205
            CG +  ++R       A+ P  D +ID +L   +  LSL+ Q  +A ++  T  +IL   
Sbjct: 1373 CGLNPRSFRQFKSNGKAHRPGPDNIIDFELLTYYEILSLEEQLDMAQQIGTTRAQILSNF 1432

Query: 1206 EEI 1208
             +I
Sbjct: 1433 SDI 1435



 Score = 45.8 bits (107), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 123/628 (19%), Positives = 233/628 (37%), Gaps = 136/628 (21%)

Query: 13  GIIAAINGNFSGTKTPEIVVARGKVLELL---------------RPENS----------G 47
           G++AA         TP +VVA   VLE+                +P +S           
Sbjct: 47  GLVAAARHPKRLGPTPNLVVAAANVLEVYAVRADAAAADGAGGAQPSSSSGAVFDGISGA 106

Query: 48  RIETLVSTEIFGAIRSLAQFRLTG-SQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETF 106
           R+E +    + G I S+A       +++D I +     +I  LE++ + +         F
Sbjct: 107 RLELVCHYRLHGNIESMAILSDGAENRRDSIALAFRDAKITCLEFDDAIHGLRTSSMHCF 166

Query: 107 G-------KSGCRRIVPGQYLAVDPKGRA-----------VMIGACEKQKLVYVLNRDTA 148
                   K G      G  +  DP GR            ++  A   Q LV     D  
Sbjct: 167 EGPEWQHLKRGRESFAWGPVIKSDPLGRCGAALVYGLQMIILKSAQVGQSLV---GEDEP 223

Query: 149 ARLTISSPLEAHKSHTIVYSICGIDC----------GFDNPIFAAIELDYSEADQDSTGQ 198
            R   S+ +    S+ I   +  +D           G+  P+   +     E +    G+
Sbjct: 224 TRALSSAAVRIESSYLI--DLRALDTNHVKDFTFVHGYIEPVLVILH----EREPTWAGR 277

Query: 199 AASEAQKNL-TFYELDLGLNHVSRKWSEP-VDNGANMLVTVPGGGDGPSGVLVCAENFVI 256
            +S+    + + + + + L      WS   + + A  +++VP      SGVLV   N + 
Sbjct: 278 ISSKHHTCMISAFSISMTLKQHPMIWSAANIPHDAYQILSVP---PPISGVLVICANSIH 334

Query: 257 YKNQG------------HPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYG 304
           Y +Q              PD    I  + +   E   L  + AT     +  F  +T  G
Sbjct: 335 YHSQSTSCSLALNNFASQPDGSPEI-HKVNFHVE---LDAAKATWLSNDIVMFSAKT--G 388

Query: 305 DIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQA---IG 361
           ++  +T+ +D   V +L +       +++ +  + S + F  S  G+  L QF       
Sbjct: 389 EMLLLTVVYDGRTVQKLDLMKSKASVISSGVTTIGSSFFFLGSRVGDSLLVQFSCGVPTS 448

Query: 362 ADPDVEASSSTLMETEEGF------------------QPVFFQ----PRGLKNLVRIEQV 399
             PD+    S  +E +  F                  + + FQ    P  L++  +I  V
Sbjct: 449 VIPDIADERSADIEGDLPFSKRLKRVPSDILQDVTSVEELSFQNNMLPNSLESAQKISYV 508

Query: 400 --ESLM---PIMD----MRI------ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSE 444
             ++L+   P+ D    +R+          ++   ++    G G   +L +L+  +    
Sbjct: 509 VRDALVNVGPLKDFSYGLRVNADPNATGNAKQSNYELVCCSGHGKNGALSVLQQSIRPDL 568

Query: 445 MAVSQLPGVPSAVWTV-------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS-- 495
           +   +LP     +WTV           ++E+ AY+++S  + T+VL  G+ + EV+++  
Sbjct: 569 ITEVELPSC-RGIWTVYYKSSRGHTTEDNEYHAYLIISLESRTMVLETGDDLGEVTETVD 627

Query: 496 GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
            ++      A +L G   ++QV+ +G R
Sbjct: 628 YYVQGATITAGNLFGRRRVIQVYATGAR 655


>gi|27807297|ref|NP_777145.1| cleavage and polyadenylation specificity factor subunit 1 [Bos
           taurus]
 gi|1706101|sp|Q10569.1|CPSF1_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
           subunit 1; AltName: Full=Cleavage and polyadenylation
           specificity factor 160 kDa subunit; Short=CPSF 160 kDa
           subunit
 gi|929007|emb|CAA58152.1| cleavage and polyadenylation specificity factor, 160 kDa subunit
           [Bos taurus]
 gi|296480730|tpg|DAA22845.1| TPA: cleavage and polyadenylation specificity factor subunit 1 [Bos
           taurus]
          Length = 1444

 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 131/641 (20%), Positives = 237/641 (36%), Gaps = 131/641 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR------------------ 42
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDSEAPTKNDRSTDGK 60

Query: 43  --PENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK 100
              E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    
Sbjct: 61  AHREHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKT 120

Query: 101 IHQETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSP 156
           +    F     + G  + V    + VDP GR   +     + +V    R++ A       
Sbjct: 121 LSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLV 180

Query: 157 LEAHKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
            E  +S  +   I             +D  F +  +    L   E +Q   G+ A   Q 
Sbjct: 181 GEGQRSSFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QD 239

Query: 206 NLTFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
             +   + L +        W   S P D    + V  P G     GV++ A N ++Y NQ
Sbjct: 240 TCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQ 294

Query: 261 GHPDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEH 313
             P     +           L  + GV I +  A     +    ++  + G+I+ +TL  
Sbjct: 295 SVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLIT 354

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASS 370
           D   +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +
Sbjct: 355 DG--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PA 408

Query: 371 STLMETEEGFQPVFFQPR--------GLKNLVR-----------------------IEQV 399
           ST  E  +  +P   + R        G K++ +                        E  
Sbjct: 409 STAREAADKEEPPSKKKRVDATTGWSGSKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVC 468

Query: 400 ESLMPIMDMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAV 447
           +S++ I     A + E        + +P    +I    G G   +L +L+  +    +  
Sbjct: 469 DSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTT 528

Query: 448 SQLPGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVL 483
            +LPG    +WTV   V  E +                         ++++S  ++T++L
Sbjct: 529 FELPGC-YDMWTVIAPVRKEQEETLKGEGTEPEPGAPEAEDDGRRHGFLILSREDSTMIL 587

Query: 484 SIGETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
             G+ + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 588 QTGQEIMELDASGFATQGPTVFAGNIGDNRYIVQVSPLGIR 628



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 110/551 (19%), Positives = 205/551 (37%), Gaps = 85/551 (15%)

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYE-TLEYAASFSSDQCVEGVVSVA 753
            + F  + G     +C  S  WL    RG   L P+  +  ++  A F +  C  G +   
Sbjct: 933  RYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMGIDGPIDSFAPFHNINCPRGFLYFN 992

Query: 754  GNA-LRVFTIE---RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREA 809
                LR+  +         +    +PLR T        + K+  +  +     T   R  
Sbjct: 993  RQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVESKVYAVATSTSTPCTRVPRMT 1052

Query: 810  AKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS 869
             +++ FE                            DE+Y +P+ E+     CI+++ P S
Sbjct: 1053 GEEKEFETIE------------------------RDERYVHPQQEA----FCIQLISPVS 1084

Query: 870  --ANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYR 926
              A     +EL++ E    + TV+   +E  + L    A G        +   G I I  
Sbjct: 1085 WEAIPNARIELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIMD 1144

Query: 927  FV----EEGKSL-----ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL--L 975
             +    E G+ L     ++L++ + +G   ALC   G L++ IG  + L+ L    L  +
Sbjct: 1145 VIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELTGM 1204

Query: 976  RKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH 1035
               + +L+ + ++S+  +   I   D+ +S    +Y+ +   L + + D+ P      + 
Sbjct: 1205 AFIDTQLYIHQMISVKNF---ILAADVMKSISLLRYQEESKTLSLVSRDAKP---LEVYS 1258

Query: 1036 IDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVG 1095
            +DF  M    + G +        VSD          +   +    G   ++     FHVG
Sbjct: 1259 VDF--MVDNAQLGFL--------VSDRDRNLMVYMYLPEAKESFGGM--RLLRRADFHVG 1306

Query: 1096 DVVTSL------------QKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEM 1143
              V +              K S+V        + T+ G +G +L    +        L+ 
Sbjct: 1307 AHVNTFWRTPCRGAAEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLM-LQN 1365

Query: 1144 HMRQEHPPLCGRDHMAYRSAYF-------PVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
             +    P   G +  A+R  +         V++V+DG+L  ++  LS   + ++A ++  
Sbjct: 1366 ALTTMLPHHAGLNPRAFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSTMERGELAKKIGT 1425

Query: 1197 TPGEILKKLEE 1207
            TP  IL  L E
Sbjct: 1426 TPDIILDDLLE 1436


>gi|395330962|gb|EJF63344.1| hypothetical protein DICSQDRAFT_153890 [Dichomitus squalens
           LYAD-421 SS1]
          Length = 1263

 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 93/422 (22%), Positives = 168/422 (39%), Gaps = 41/422 (9%)

Query: 396 IEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMA-VSQLPGVP 454
           ++  +++ PIMD  +A++     PQ+ T  G     SLR++R      E A +  L GV 
Sbjct: 460 LQNFDNIAPIMDAALADIDGSGQPQVITSSGGRNTGSLRVIRTEADFQEQARLDGLIGV- 518

Query: 455 SAVWTVKKNVNDEFDAYIVVSFNNATLVLSI--GETVEEVSDS--GF--------LDTTP 502
           + +W VK +  +    ++VVS    T V +    + +  +  S  GF        L   P
Sbjct: 519 TDIWPVKTHSAEPIHTHLVVSTLRETHVFAFEGKDAIAHLDPSVAGFTTHAPTFVLGNIP 578

Query: 503 SLAVSLIGDDS------LMQVHPSGIRHIRED------GRINEWRTPGK-------RTIV 543
              VS  G  S      ++Q+   GI+ +  +      G++     P +       R IV
Sbjct: 579 RRVVSASGTSSYEHSSLVVQITSEGIQLVEYEPTLFAFGKVGPGWYPKQVGGEYAGREIV 638

Query: 544 KVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLA 603
               +  Q V+ LSGG L  F +     +  +       ++  +        +  +  +A
Sbjct: 639 AAAMSPSQFVVGLSGGRLALFNLGQKDTVQLLTTRNFPDEICAISCQPYDSSKNYASAIA 698

Query: 604 VGSY-DNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNA 662
           V  +  N + +L+LDP   +  +   ++ + P  +L          +D   HP    L  
Sbjct: 699 VSFWGSNKVAVLALDPSSPLATVCDTALPTLPRVVLLHNFGTGGRPKDPDFHP---HLLV 755

Query: 663 GLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRG 722
           GL +G L      +  G+L D +   LG  P  L    V GR  +    +R  + +  R 
Sbjct: 756 GLADGTL--VTYALRDGKLHDRKQSGLGNAPASLSVCDVDGRTVVFASGARSSVLFWDRQ 813

Query: 723 RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRY-TPR 781
           R   +P+S + +    + ++      +     +AL + T+  L +    T +PL   +PR
Sbjct: 814 RVRPSPVSVKDMIKGVTLNTAAFPSCLAIATSSALLIGTVRGLDKMQIRT-IPLGLDSPR 872

Query: 782 RF 783
           R 
Sbjct: 873 RL 874


>gi|157864037|ref|XP_001687566.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68223777|emb|CAJ02009.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 1980

 Score = 66.6 bits (161), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 113/309 (36%), Gaps = 93/309 (30%)

Query: 151 LTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQ----------------- 193
           + +S+P+E  +  T++YS C +D   D+ +FA +E +  EA                   
Sbjct: 315 INLSTPIEMQR-QTVLYSACALDGYLDHAVFAVLEEEIVEARDAAAAASASNPANAAAAA 373

Query: 194 ---------DSTG--QAASEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGD 242
                     S+G   A  +  K+   Y     L  V R     V   A+ L+ VP    
Sbjct: 374 AEASGGTFLKSSGGPNAVVQRHKHFVLYAYVPSLKQVQRTQLVHVPVTAHRLIAVPAAPY 433

Query: 243 GPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHR------------ 290
           GP GVLVC +  +I+ +      +      A      GV   + A  R            
Sbjct: 434 GPGGVLVCTDTELIWYDVSATQQQQQQNSAAAANGRVGVFKCTYAFPRRLDCTEILYDPS 493

Query: 291 --QKTL------FFFLLQTEYGDIFKVTLE-------HDNEHVSEL-------------- 321
             Q TL      FF LLQ E GD+++V LE       ++     EL              
Sbjct: 494 IIQHTLTCFGRRFFMLLQDEQGDVYRVFLEAGDVQRAYEALRTRELAQANPELFLQQQQQ 553

Query: 322 ----------------------KIKYFDTIPVTASMCVLKSGYLFAASEFGN-HALYQFQ 358
                                  + YFDT+P +++M + + G+LF  +E G  H LY+ +
Sbjct: 554 QQLAANGGVAPAPVLPPVPNPLSVHYFDTLPPSSAMALFRRGFLFIGNEAGPLHGLYKIK 613

Query: 359 AIGADPDVE 367
           + G   D E
Sbjct: 614 SNGYTADRE 622



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 25/192 (13%)

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEE---DPTGGKIKWEQGKLN 1080
            DSVPR +T+   +D  T+A +D+FG + F+R+P+    +  +        ++  E+  L 
Sbjct: 1758 DSVPRHITSVVAVDERTIAASDRFGTVVFLRIPETTRTQFAQPVHQLQDAELIAEEAYLR 1817

Query: 1081 GAPNKMEEIVQFHVGDVVTSLQKASLVPGGGES-------VIYGTVMGSLGAMLAFSSRD 1133
                   E+ + HVG++VT+L      P  G         V Y T +GS+GA +   S +
Sbjct: 1818 -TKQTFREVARHHVGELVTALHVQPYDPSQGTDAALATKIVYYSTALGSIGAYVPLLSEE 1876

Query: 1134 DVDFFSHLE----MHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF-----PTLSL 1184
            D    ++L+     HMR    P       +Y S +     V+DGD+ +          S 
Sbjct: 1877 DGALAAYLQPLLHSHMRPLLGPPPALPPASYLSHH-----VVDGDVAQLLRGGATTPFSA 1931

Query: 1185 DLQRKIADELDR 1196
              +  IA+EL+R
Sbjct: 1932 AAKDDIAEELER 1943



 Score = 43.9 bits (102), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 77/210 (36%), Gaps = 74/210 (35%)

Query: 3   LYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--PENS-GRIETLVSTEIFG 59
           LY  TL     +  AI G+F+     ++V+ R  VLEL R   EN+ G +E +  T +  
Sbjct: 29  LYHQTLIPTQNVTHAIEGSFTLPDANDLVLIRHNVLELWRLYAENANGGVECVCRTPLMS 88

Query: 60  AI----------RSLAQFRLTGSQKD----------------------YIVVGSDSGRIV 87
           A+           S+A+   TGS                         Y+ V S++G + 
Sbjct: 89  AVYAAVAVPTSASSMAKAGGTGSAASPGGSVAPVLDDATTTAHRSGVHYLAVTSETGYVT 148

Query: 88  ILEYN------PS---------------------------------KNVFDKIHQETFGK 108
           +L Y       P+                                 K  F K+ +   G+
Sbjct: 149 LLRYQLDEPPVPTRLSYGDDSDEGNEGVGGNSGASGGATMLVTTSLKGRFIKVSEVCLGR 208

Query: 109 SGCRRIVPGQYLAVDPKGRAVMIGACEKQK 138
           SG R  VPG  + VDP G A++I A  + K
Sbjct: 209 SGARLTVPGARMVVDPAGTALLITALMRTK 238


>gi|358415280|ref|XP_003583063.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Bos taurus]
          Length = 1490

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 118/579 (20%), Positives = 221/579 (38%), Gaps = 113/579 (19%)

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
           E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 110 EHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 169

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 170 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEG 229

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   ++L +             E +Q   G+ A   Q   
Sbjct: 230 QRSSFLPSYIIDVR-ALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGKVAVR-QDTC 287

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  
Sbjct: 288 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSV 342

Query: 263 PDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 343 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 402

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +ST
Sbjct: 403 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PAST 456

Query: 373 LMETEEGFQPVFFQPR--------GLKNLVR-----------------------IEQVES 401
             E  +  +P   + R        G K++ +                        E  +S
Sbjct: 457 AREAADKEEPPSKKKRVDATTGWSGSKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDS 516

Query: 402 LMPIMDMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQ 449
           ++ I     A + E        + +P    +I    G G   +L +L+  +    +   +
Sbjct: 517 ILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFE 576

Query: 450 LPGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSI 485
           LPG    +WTV   V  E +                         ++++S  ++T++L  
Sbjct: 577 LPGC-YDMWTVIAPVRKEQEETLKGEGTEPEPGAPEAEDDGRRHGFLILSREDSTMILQT 635

Query: 486 GETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           G+ + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 636 GQEIMELDASGFATQGPTVFAGNIGDNRYIVQVSPLGIR 674



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 110/554 (19%), Positives = 209/554 (37%), Gaps = 91/554 (16%)

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYE-TLEYAASFSSDQCVEGVVSVA 753
            + F  + G     +C  S  WL    RG   L P+  +  ++  A F +  C  G +   
Sbjct: 979  RYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMGIDGPIDSFAPFHNINCPRGFLYFN 1038

Query: 754  GNA-LRVFTIE---RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREA 809
                LR+  +         +    +PLR T        + K+  +  +     T   R  
Sbjct: 1039 RQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVESKVYAVATSTSTPCTRVPRMT 1098

Query: 810  AKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS 869
             +++ FE                            DE+Y +P+ E+     CI+++ P S
Sbjct: 1099 GEEKEFETIE------------------------RDERYVHPQQEA----FCIQLISPVS 1130

Query: 870  --ANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYR 926
              A     +EL++ E    + TV+   +E  + L    A G        +   G I I  
Sbjct: 1131 WEAIPNARIELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIMD 1190

Query: 927  FV----EEGKSL-----ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL--L 975
             +    E G+ L     ++L++ + +G   ALC   G L++ IG  + L+ L    L  +
Sbjct: 1191 VIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELTGM 1250

Query: 976  RKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH 1035
               + +L+ + ++S+  +   I   D+ +S    +Y+ +   L + + D+ P  + +   
Sbjct: 1251 AFIDTQLYIHQMISVKNF---ILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDF 1307

Query: 1036 IDFDTMAG---ADKFGNIY-FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQ 1091
            +  +   G   +D+  N+  ++ LP+       ++  GG              ++     
Sbjct: 1308 MVDNAQLGFLVSDRDRNLMVYMYLPE------AKESFGGM-------------RLLRRAD 1348

Query: 1092 FHVGDVVTSL------------QKASLVPGGGESVIYGTVMGSLGAMLAFSSRD--DVDF 1137
            FHVG  V +              K S+V        + T+ G +G +L    +    +  
Sbjct: 1349 FHVGAHVNTFWRTPCRGAAEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLM 1408

Query: 1138 FSHLEMHMRQEHPPLCGRD----HMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADE 1193
              +    M   H  L  R     H+  R     V++V+DG+L  ++  LS   + ++A +
Sbjct: 1409 LQNALTTMLPHHAGLNPRAFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSTMERGELAKK 1468

Query: 1194 LDRTPGEILKKLEE 1207
            +  TP  IL  L E
Sbjct: 1469 IGTTPDIILDDLLE 1482


>gi|426361048|ref|XP_004047737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Gorilla gorilla gorilla]
          Length = 1440

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 132/639 (20%), Positives = 232/639 (36%), Gaps = 131/639 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP G    +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGTCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEHD 314
                +           L  + GV I       Q T   +   ++  + G+I+ +TL  D
Sbjct: 295 PYGVALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLITD 352

Query: 315 NEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSS 371
              +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +S
Sbjct: 353 G--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PAS 406

Query: 372 TLMETEEGFQPVFFQPR-----------------------------GLKNLVRIEQV-ES 401
            + E  +  +P   + R                             G    V + QV +S
Sbjct: 407 AVREAADKEEPPSKKKRVDATAGWSGEGRSRAGQERGQVTQGWSGAGAPLTVAVPQVCDS 466

Query: 402 LMPIMDMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQ 449
           ++ I     A + E        + +P    +I    G G   +L +L+  +    +   +
Sbjct: 467 ILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFE 526

Query: 450 LPGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSI 485
           LPG    +WTV   V  E +                         ++++S  ++T++L  
Sbjct: 527 LPGC-YDMWTVIAPVRKEEEDNPKGEGTEQEPSTPEADDDGRRHGFLILSREDSTMILQT 585

Query: 486 GETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           G+ + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 586 GQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 624


>gi|156364999|ref|XP_001626630.1| predicted protein [Nematostella vectensis]
 gi|156213514|gb|EDO34530.1| predicted protein [Nematostella vectensis]
          Length = 1420

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 138/632 (21%), Positives = 238/632 (37%), Gaps = 122/632 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR---------------PEN 45
           MY        PTG+   +N +F   +   +VVA    + + R                  
Sbjct: 1   MYAIYKETHPPTGVEFCVNCHFYSARESNLVVAGTTEVRVFRLCYQQEGSSSAESGGSSL 60

Query: 46  SGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET 105
             ++E +    +FG I SL   RL G+ +D +++     ++ I++Y+P K+         
Sbjct: 61  KRKLELVGQHSLFGNIESLHAIRLAGNTRDSLLMSFKDAKLSIVDYDPGKHDIKTRSLHF 120

Query: 106 FG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNR-----DTAARLTISS- 155
           F     KS C        + +DP+ R  ++ A     +V    +     DTA    ISS 
Sbjct: 121 FEDEKIKSHCLAQDRAPVVRIDPERRCAVMLAYGTHLVVLPFRQEGGIDDTAQDSIISSS 180

Query: 156 ------PLEAHKSHTIVYSICGI-DCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
                 P        I    C I D  F +  +    L   E  +   G+    A +N T
Sbjct: 181 DRPPVLPSYIIDVKEIDEKTCNILDIQFLHGYYEPTLLILYEPLKTWAGRL---AMRNDT 237

Query: 209 FYELDLGLNHVSRK----W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQG 261
              + + LN   +     W     P D    M V  P G     GVLVC  N ++Y NQ 
Sbjct: 238 CALVAVSLNMSQKAHPVVWQLSCLPFDCIYVMPVPKPIG-----GVLVCCMNALLYLNQS 292

Query: 262 HP----DVRAVIPRRADLP--AERGVLIV---SAATHRQKTLFFFLLQTEYGDIFKVTLE 312
            P     V ++       P   ++GV I    S A         F L+   G+I+ VTL 
Sbjct: 293 VPPYGVSVNSIGENSTVFPLKPQKGVTITLEGSNAIFIANDKLVFSLKG--GEIYVVTLI 350

Query: 313 HDNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQ------AIGAD 363
            D   V  ++   FD      +T+ +C    GYLF  S  GN  L ++         G +
Sbjct: 351 ADG--VRSVRNFVFDKTAASVLTSCVCECGDGYLFLGSRLGNSLLVKYTEKPQDIVYGTE 408

Query: 364 PDVEASSSTLMETEEGFQPVFF---------------QPRGLK-NLVRIEQVESLMPI-- 405
            + ++     +E  +                      Q  G++      E  +SL+ I  
Sbjct: 409 NNAQSMQCDNIERWQILNGSLLLIVDDLDELEVYGAQQEAGVELTSYTFEVCDSLLNIGP 468

Query: 406 ---MD------MRIANLF---EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
              MD      + +++ F   +E   ++ +  G G   +L +L+  +    +   +LPG 
Sbjct: 469 CSCMDIGEPAFLSVSSYFADAQELDLEVVSCSGYGKNGALTVLQRSIRPQVVTTFELPGC 528

Query: 454 PSAVWTV-----KKNV----------------NDEFDAYIVVSFNNATLVLSIGETVEEV 492
            + +WTV     KK                  N+++ +++++S  +++++L   + + EV
Sbjct: 529 -TDMWTVFSKDQKKGAQTNAIHRYPSQPCTQGNEKYHSFLILSREDSSMILKTEQEIMEV 587

Query: 493 SDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
             SGF     ++     G+ S ++QV P G+R
Sbjct: 588 DQSGFSTQCATIYAGNFGNGSYILQVTPLGVR 619



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 113/558 (20%), Positives = 223/558 (39%), Gaps = 99/558 (17%)

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYE-TLEYAASFSSDQCVEGVVSVA 753
            ++F+ +       +C S   W+   +RG F   P+S +  +   A+F +  C +G +   
Sbjct: 911  RVFNDISSYSGIFVCGSYPFWIFVTNRGAFHWHPMSIDGPVTCFAAFHNVNCPKGFLYFN 970

Query: 754  GNA-LRVFTIE---RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREA 809
                LR+  +         +    +PLRYTP       + K   I+ ++Q       R  
Sbjct: 971  TRGELRISVLPTHLSYDSPWPVRKVPLRYTPHMVSYNRESKTYAIVTSEQEPCKKIPRVT 1030

Query: 810  AKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS 869
            A                        +D+   D + D ++ YP  E  ++V  ++++ P S
Sbjct: 1031 A------------------------EDKEFVDTIRDARFIYPSTE--RFV--LQLISPIS 1062

Query: 870  ANT--TCLLELQDNEAAFSICTVNFHDKEHGT----LLAVGTAKGLQFWPKRNIVAGYIH 923
                     +L + E   ++  +  H +E  T     + VGT    Q + +   V G I 
Sbjct: 1063 WEVIPNTRHDLDEWEHVTTMKNLLLHSEETHTGRKGFICVGTT---QLYGEEIAVRGRIL 1119

Query: 924  IYRFVE----EGKSL-----ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL 974
            I+  +E     G+ L     +LL++ + +G   AL Q  G L++GIG  + +++     L
Sbjct: 1120 IFDIIEVVPEPGQPLTKNKFKLLYEKEQKGPVTALNQVNGYLVSGIGQKIYIWNFTDNDL 1179

Query: 975  --LRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTA 1032
              +   + +L+ +++V+I   R+ +   D+ +S    + + +   L   + D     + A
Sbjct: 1180 VGMAFIDTQLYIHSLVTI---RNFVIAADVCKSITLLRLQEETKTLAFVSKDPKNLEVYA 1236

Query: 1033 AHHIDFDTMAG---ADKFGN-IYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEE 1088
            A         G   +D   N + F   P+ +  +      GG+   ++  +N        
Sbjct: 1237 ADFFIDGPQIGFLVSDVEKNLVLFTYQPEAIESQ------GGQRLLQRADIN-------- 1282

Query: 1089 IVQFHVGDVVTSLQKASLVPGGGES------VIYGTVMGSLGAMLAFSSRDDVDFFSHLE 1142
             V  H+        KA L   G +S        +GT+ G+LG ML  + +      +   
Sbjct: 1283 -VGTHITSFFRIAAKAHLKASGEKSKEMRQLTCFGTLDGALGLMLPMTEK------TFRR 1335

Query: 1143 MHMRQEH-----PPLCGRDHMAYRSAYF-------PVKDVIDGDLCEQFPTLSLDLQRKI 1190
            +HM Q       P + G +  A+R   +       P ++V+D  L  ++  LS   ++++
Sbjct: 1336 LHMLQTKLVDCIPHVAGLNPKAFRMLQWRKRKLCNPHRNVLDWQLLFKYMHLSFMERQEV 1395

Query: 1191 ADELDRTPGEILKKLEEI 1208
            A ++  TP +I+  + +I
Sbjct: 1396 ARKIGTTPAQIMDDMMDI 1413


>gi|353235645|emb|CCA67655.1| hypothetical protein PIIN_01483 [Piriformospora indica DSM 11827]
          Length = 1145

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 119/595 (20%), Positives = 215/595 (36%), Gaps = 90/595 (15%)

Query: 234 LVTVPGGGDGPSGVLVCAENFVIY-------KNQGHPDVRAVIPRRADLPAERGVLIVSA 286
           ++ VP     P G+L+   +  I+       K Q     R    R+ DL  E     VS 
Sbjct: 220 MICVPRAASKPGGLLLFGPDCTIFYQADKLHKMQSPAKSRRTSTRQPDLYEEWKYSDVSG 279

Query: 287 ATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCV--LKSGYLF 344
                ++    LL  +YG +  + L++D + +    I        +A  C+  L +G +F
Sbjct: 280 YGFIDES--RLLLSDKYGKLVLLALDNDPKKIPAGAINIHLLGEASAGSCIAYLNAGVIF 337

Query: 345 AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
             SE G+  L +  + G                               L  I+   +  P
Sbjct: 338 IGSETGDSQLMKITSSG------------------------------KLEVIDTFSNTAP 367

Query: 405 IMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
           I D  +A+L       + T  G G   SLR +R G  + E+A S    +P       +  
Sbjct: 368 IADAVLADLDNTGDHVVVTCSGNGRTGSLRTIRSGANIEELA-SMETSIPIKNIFPLQET 426

Query: 465 NDEFDAYIVVSFNNATLVLSIGET--VEEVSDSGF-------------------LDTTPS 503
           +     Y+++S++  T ++   E   + E+S   F                    DTT +
Sbjct: 427 SGTSHLYMLISYDQETKLVDAREAPRLSELSAHQFPGVAREFPTLAAGNVRRTIFDTT-T 485

Query: 504 LAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIY 563
           LAV +    +++    SG  + R  G I      G             V + L GG++I 
Sbjct: 486 LAVQVTTRAAILFDVQSGAEYCRWSGSITTASVSGD-----------AVCLGLRGGKVIA 534

Query: 564 FEVDM-TGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCM 622
            +VD+   +L+   +     +++ L I  +  G   S  + +G ++          D  +
Sbjct: 535 LKVDIEAAKLVTQAERNFDKEISTLSIEPIQSGEVTSNVVVIGFWE----------DFLV 584

Query: 623 QILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL- 681
           +I  + +++   E +       SV   +  D    L+L  G  NG +    +     ++ 
Sbjct: 585 KICQLHNLAQVGEDIETPHTPHSVLAWNFGDRKEGLYLLVGTGNGHILSVKLKETKNRVL 644

Query: 682 -SDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF 740
            +  R+  LG RP  L    + G   ++   SR  L     GR     ++ + +E  A F
Sbjct: 645 ATSRRTVVLGDRPVLLHRCSIAGAEVIMATGSRAMLLSWSNGRIAQHHVNIKNIESVAPF 704

Query: 741 SSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRY-TPRRFVLQPKKKLMVI 794
           +S    + ++      L +  I +L E     ++ L Y  P      P  K   +
Sbjct: 705 TSSAFGDALIFKLTKGLSIARIGKL-EKLKIDSVSLGYDVPNTLAYHPDIKAFAV 758


>gi|322708188|gb|EFY99765.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
          Length = 247

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%)

Query: 118 QYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
           QYLA DPKGRA +I + EK  L++VL+R+  A LTISSPL A K   + +S+  +D G+
Sbjct: 36  QYLATDPKGRACLIASIEKNNLIHVLDRNAEADLTISSPLGARKHGILDFSVVSLDVGY 94


>gi|74212803|dbj|BAE33365.1| unnamed protein product [Mus musculus]
          Length = 741

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 131/634 (20%), Positives = 234/634 (36%), Gaps = 120/634 (18%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+   +  NF       +VVA    L + R         +N G     
Sbjct: 1   MYAVYKQAHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE 316
                +           L  + GV I +  A     +    ++  + G+I+ +TL  D  
Sbjct: 295 PYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG- 353

Query: 317 HVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAI-----------GA 362
            +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++               A
Sbjct: 354 -MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAA 412

Query: 363 DPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI----------------EQVESLMPIM 406
           D +   S    +E   G+      P+   + + +                E  +S++ I 
Sbjct: 413 DKEEPPSKKKRVEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIG 472

Query: 407 DMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP 454
               A + E        + +P    +I    G G   +L +L+  +    +   +LPG  
Sbjct: 473 PCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC- 531

Query: 455 SAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGETVE 490
             +WTV   V  E +                         ++++S  ++T++L  G+ + 
Sbjct: 532 YDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTGQEIM 591

Query: 491 EVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 592 ELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 625


>gi|85107301|ref|XP_962347.1| hypothetical protein NCU06605 [Neurospora crassa OR74A]
 gi|28923951|gb|EAA33111.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 1158

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 164/835 (19%), Positives = 313/835 (37%), Gaps = 112/835 (13%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +P+ +  A+  N    +   +++A+   +E+ +  + G +  + S  I G I  
Sbjct: 3   YVAPIHRPSSVRHALRINLLSPEEESLIIAKTNRIEIWKLAD-GHLSMIHSKVINGTITI 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ---YL 120
           L + +      D + VG+D       E++        +++  F   G R +   Q     
Sbjct: 62  LQKLQPKDHPTDLLFVGTDQFEYFTAEWDRETQQLKTLNR--FSDPGERHMRDSQSQNKC 119

Query: 121 AVDPKGRAVMIGACEKQKLVYVL--NRDTAARLTISSPLEAH----KSHTIVYSICGIDC 174
            VDP GR + +   E    V+ L   ++TA  L I   +       K  T +Y+  GI  
Sbjct: 120 IVDPSGRFMAMHLWEGVLSVWRLGNRKNTATTLDILVQVRLSELFIKGSTFLYTETGI-- 177

Query: 175 GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPV-DNGANM 233
               P  A +  +          QA S   K L  Y L     H      +P  D   + 
Sbjct: 178 ----PKVAFLYRN----------QANSNETK-LATYRLTSDDRHTEISKFDPTRDREIDA 222

Query: 234 LVTVPGGGDGPSGVLVCAENFV------IYKN--QGHPDVRAVIPRRADLPAERGVLIVS 285
            V  PG     +G+L+  +          ++N  Q  P V  +I     +  E  +L + 
Sbjct: 223 DVEDPG-----AGILIPVKKVEEEVKRHHFRNTEQAKPHVGGLI-----VVGETRLLYID 272

Query: 286 AATH-------RQKTLFF---------FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTI 329
             T        R+ ++F          + L  +YG++  +T+  +   V+ + +      
Sbjct: 273 EVTKTQVESALREPSIFVAWAEYDPTHYFLSDDYGNLHLLTILTEGAVVTGMDVSNIGKT 332

Query: 330 PVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRG 389
                +  L    LF  S +GN  LY+   +  D    +    L++  E   PV      
Sbjct: 333 ARAHVLTYLGDDMLFVGSHYGNSQLYRLNLLSEDL---SEILQLVQVLENIGPV------ 383

Query: 390 LKNLVRIEQVESLMPIMDM-------RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAV 442
                      +   +MDM       ++ N +     +I T  G     +LR +R G+ +
Sbjct: 384 -----------TDFTVMDMGNRENDSQLGNEYSSGQARIVTASGVFKDGTLRSVRSGVGL 432

Query: 443 SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLD 499
            ++A+        A+++++   +   D  +V SF   T +      GE +EEV +   +D
Sbjct: 433 QDIAILGELQHTRALFSLQSYNSPRVDT-LVASFLTDTRIFKFDPHGE-IEEVDNYYGMD 490

Query: 500 TT-PSLAVSLIGDDSLMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIAL 556
               +L  + + +  L+QV  +    +  +    I  W   G R I+   +N+  +++++
Sbjct: 491 LQHQTLLATNLDNGQLLQVTTAAATLLDAESGVTIASWAPEGDRQIINASANKHWLLLSV 550

Query: 557 SGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSL 616
            G  L+   +D    +++ +       +AC+ +A          F   G+  + I + +L
Sbjct: 551 QGTTLVSINIDNDLTVVQEKDISEQDQIACIHVAPQLSDVGVVGFWTSGTV-SIIDMSTL 609

Query: 617 DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDM 676
           +P     +      +S P  L+  +V  +  G        +LF+     N V F    D+
Sbjct: 610 EPIHGESLRRSADDASIPRDLVLAKVLPNAPG-------MTLFIAMEDGNVVTFNIGEDL 662

Query: 677 VTGQLSDSRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLE 735
                S  +S  LG R  +   +    G  ++   +  P L Y   GR + + ++ E   
Sbjct: 663 T---FSGRKSVILGTREARFHLLPQQDGIYSIFATTEHPSLIYGSEGRIIYSAVTAEDAT 719

Query: 736 YAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
               F S+     V+    N +R+  I+   +T +  +L L    RR    P +K
Sbjct: 720 CVCPFDSEAFPGAVILSTENEIRISEIDTARQT-HVRSLELGEMVRRIAYSPSEK 773


>gi|334326317|ref|XP_001364707.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Monodelphis domestica]
          Length = 1449

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 130/642 (20%), Positives = 235/642 (36%), Gaps = 128/642 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR------------------ 42
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFSNAERNLVVAGTSQLYVYRLNHDAETSTKSDRNAEGK 60

Query: 43  --PENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK 100
              E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    
Sbjct: 61  LHKEHKEKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKT 120

Query: 101 IHQETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSP 156
           +    F     + G  + V    + VDP GR  ++     + +V    R++ A       
Sbjct: 121 LSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAVMLIYGTRLVVLPFRRESLAEEHEGLV 180

Query: 157 LEAHKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
            E  KS  +   I             ID  F +  +    L   E +Q   G+ A   Q 
Sbjct: 181 GEGQKSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QD 239

Query: 206 NLTFYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
             +   + L +        WS    P D    + V  P GG     V++ A N ++Y NQ
Sbjct: 240 TCSIVAISLNILQKVHPVIWSLTNLPFDCTQALAVPKPIGG-----VVIFAVNSLLYLNQ 294

Query: 261 GHP----DVRAVIPRRADLP--AERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEH 313
             P     + ++       P   + GV I +  A     +    ++  + G+I+ +TL  
Sbjct: 295 SVPPYGVSLNSLTAGTTAFPLRMQDGVKITLDCAQAAFISYDKMVISLKGGEIYVLTLIT 354

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQF-QAIGADPDVEAS 369
           D   +  ++  +FD      +T  M  ++ GYLF  S  GN  L ++ + +   P   A 
Sbjct: 355 DG--MRSVRSFHFDKAAASVLTTCMITMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAAR 412

Query: 370 SSTLMETEEGFQPVFFQPRGLKNL-------------------------------VRIEQ 398
            +   E  +  +P   + R    L                                  E 
Sbjct: 413 EAPSREVSDKDEPPVKKKRVESTLGWAGGKSAPQDEVDEIEVYGSEAQSGTQLATYSFEV 472

Query: 399 VESLMPIMDMRIANLFE--------EEAPQ----IFTLCGRGPRSSLRILRPGLAVSEMA 446
            +S++ I     A + E        + +P+    I    G G   +L +L+  +    + 
Sbjct: 473 CDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVT 532

Query: 447 VSQLPGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLV 482
             +LPG    +WTV   +  E D                         ++++S  ++T++
Sbjct: 533 TFELPGC-YDMWTVIAPLRKEEDETTKGEGAEQEPSSPETEDDGKRHGFLILSREDSTMI 591

Query: 483 LSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           L  G+ + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 592 LQTGQEIMELDTSGFATQGPTVYAGNIGDNRYIVQVSPLGIR 633


>gi|395512730|ref|XP_003760588.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Sarcophilus harrisii]
          Length = 1449

 Score = 65.1 bits (157), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 130/642 (20%), Positives = 235/642 (36%), Gaps = 128/642 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR------------------ 42
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFSNAERNLVVAGTSQLYVYRLNHDAETSTKSDRNAEGK 60

Query: 43  --PENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK 100
              E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    
Sbjct: 61  LHKEHKEKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKT 120

Query: 101 IHQETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSP 156
           +    F     + G  + V    + VDP GR  ++     + +V    R++ A       
Sbjct: 121 LSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAVMLIYGTRLVVLPFRRESLAEEHEGLV 180

Query: 157 LEAHKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
            E  KS  +   I             ID  F +  +    L   E +Q   G+ A   Q 
Sbjct: 181 GEGQKSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QD 239

Query: 206 NLTFYELDLGLNHVSRK--WS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
             +   + L +        WS    P D    + V  P G     GV++ A N ++Y NQ
Sbjct: 240 TCSIVAISLNILQKVHPVIWSLTNLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQ 294

Query: 261 GHP----DVRAVIPRRADLP--AERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEH 313
             P     + ++       P   + GV I +  A     +    ++  + G+I+ +TL  
Sbjct: 295 SVPPYGVSLNSLTAGTTAFPLRMQDGVKITLDCAQAAFISYDKMVISLKGGEIYVLTLIT 354

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQF-QAIGADPDVEAS 369
           D   +  ++  +FD      +T  M  ++ GYLF  S  GN  L ++ + +   P   A 
Sbjct: 355 DG--MRSVRSFHFDKAAASVLTTCMITMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSAR 412

Query: 370 SSTLMETEEGFQPVFFQPRGLKNL-------------------------------VRIEQ 398
            +   E  +  +P   + R    L                                  E 
Sbjct: 413 EAPSREVSDKDEPPVKKKRVESTLGWAGGKSAPQDEVDEIEVYGSEAQSGTQLATYSFEV 472

Query: 399 VESLMPIMDMRIANLFE--------EEAP----QIFTLCGRGPRSSLRILRPGLAVSEMA 446
            +S++ I     A + E        + +P    +I    G G   +L +L+  +    + 
Sbjct: 473 CDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVT 532

Query: 447 VSQLPGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLV 482
             +LPG    +WTV   +  E D                         ++++S  ++T++
Sbjct: 533 TFELPGC-YDMWTVIAPLRKEEDETTKGEGPEQEPSSPETEDDGKRHGFLILSREDSTMI 591

Query: 483 LSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           L  G+ + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 592 LQTGQEIMELDTSGFATQGPTVYAGNIGDNRYIVQVSPLGIR 633


>gi|401882870|gb|EJT47110.1| hypothetical protein A1Q1_04103 [Trichosporon asahii var. asahii
           CBS 2479]
          Length = 1107

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 93/420 (22%), Positives = 161/420 (38%), Gaps = 56/420 (13%)

Query: 293 TLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
           T+   LL  EYG +  V  E ++    ++ +     +   +S+  L +GYLF+AS  G+ 
Sbjct: 286 TVLAVLLGDEYGRLTAVGWEFEDMEKVQVGMIDMGVVSAPSSLTYLDNGYLFSASACGDS 345

Query: 353 ALYQFQAIGADPDVEASSSTLMETEE-----GFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
            L        +   + S     +  +      ++ V  +P+  +  VR E+  ++ P  D
Sbjct: 346 LLVYLVLPSPNSTRQPSGKGKEKAHDISDAGAYEIVTAEPQHGRVDVR-ERWMNIAPAKD 404

Query: 408 MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSE-MAVSQLPGVPSAVWTVKKNVND 466
             I    +     +    G    +S R++R G+     M + ++PG+   +WT+      
Sbjct: 405 FAIVKEDDGRVSHVVVASGSASSNSFRVVRSGVGFENLMTIEEIPGI-ERMWTIPAADGP 463

Query: 467 EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
                ++VSF  +T +L I   V     +  +   P+ A  L+    L+QV P GIR   
Sbjct: 464 S----LMVSFAYSTTILQIEPEVSVFKAADQVTAVPTFAAGLVDKSLLLQVTPEGIRLWS 519

Query: 527 E------DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
           +       G ++    P    I          V A   G +  F     G L EV K   
Sbjct: 520 DLAAGMLAGNVD---APEDNRIATANVRGNIAVAAFRDGTVTLFRASSQG-LQEVVKG-- 573

Query: 581 SGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFL 640
                               FLA+  +   I +++++  D   +L     ++   SL F 
Sbjct: 574 --------------------FLAIADWCGEIDLVAVEGADQGTVLKSIREAAYATSLQFQ 613

Query: 641 EVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSR-SRFLGLRPPKLFSV 699
           E           + P  L   AGL +G      V +   + SDSR +  LGLRP +L ++
Sbjct: 614 ESN---------NEPTRLL--AGLSDGTFVSYSVKLNGAECSDSRHASSLGLRPLRLIAL 662


>gi|336470789|gb|EGO58950.1| hypothetical protein NEUTE1DRAFT_145059 [Neurospora tetrasperma
           FGSC 2508]
 gi|350291855|gb|EGZ73050.1| hypothetical protein NEUTE2DRAFT_156600 [Neurospora tetrasperma
           FGSC 2509]
          Length = 1158

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 163/832 (19%), Positives = 313/832 (37%), Gaps = 106/832 (12%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +P+ +  A+  N    +   +++A+   +E+ +  + G +  + S  I G I  
Sbjct: 3   YVAPIHRPSSVRHALRINLLSPEEESLIIAKTNRIEIWKLAD-GHLFMIHSKVINGTITI 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ---YL 120
           L + +      D + VG+D       E++        +++  F   G R +   Q     
Sbjct: 62  LQKLQPKDHPTDLLFVGTDQFEYFTAEWDRETQQLKTLNR--FSDPGERHMRDSQSQNKC 119

Query: 121 AVDPKGRAVMIGACEKQKLVYVL--NRDTAARLTISSPLEAH----KSHTIVYSICGIDC 174
            VDP GR + +   E    V+ L   ++TA  L I   +       K  T +Y+  GI  
Sbjct: 120 IVDPSGRFMAMHLWEGVLSVWRLGNRKNTATTLDILVQVRLSELFIKGSTFLYTETGI-- 177

Query: 175 GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPV-DNGANM 233
               P  A   L  ++A+ + T  A      +    E+        R+    V D GA +
Sbjct: 178 ----PKVAF--LYRNQANSNETKLATYRLTSDDRHTEISKFDPTRDREIDADVEDPGAGI 231

Query: 234 LVTVPG---------------GGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE 278
           L+ V                       G++V  E  ++Y ++        + +     A 
Sbjct: 232 LIPVKKVEEEVKRHHFRNTEQAKPHVGGLIVVGETRLLYIDE--------VTKTQVESAL 283

Query: 279 RGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVL 338
           R   I  A      T +F  L  +YG++  +T+  +   V+ + +           +  L
Sbjct: 284 REASIFVAWAEYDPTHYF--LSDDYGNLHLLTILTEGAVVTGMDVSNIGKTARAHVLTYL 341

Query: 339 KSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQ 398
               LF  S +GN  LY+   +  D                          L  ++++ Q
Sbjct: 342 GDDMLFVGSHYGNSQLYRLNLLSED--------------------------LSEILQLVQ 375

Query: 399 V-ESLMPI-----MDM-------RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEM 445
           V E++ PI     MDM       ++ N +     +I T  G     +LR +R G+ + ++
Sbjct: 376 VLENIGPITDFTVMDMGNRENDSQLGNEYSSGQARIVTASGVFKDGTLRSVRSGVGLQDI 435

Query: 446 AVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTT- 501
           A+        A+++++   +   D  +V SF   T +      GE +EEV +   +D   
Sbjct: 436 AILGELQHTRALFSLQSYNSPRVDT-LVASFLTDTRIFKFDPHGE-IEEVDNYYGMDLQH 493

Query: 502 PSLAVSLIGDDSLMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIALSGG 559
            +L  + + +  L+QV  +    +  +    I  W   G R I+   +N+  +++++ G 
Sbjct: 494 QTLLATNLDNGQLLQVTTAAATLLDAESGVTIASWAPEGDRQIINASANKHWLLLSVQGT 553

Query: 560 ELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPD 619
            L+   +D    +++ +       +AC+ +A          F   G+  + I + +L+P 
Sbjct: 554 TLVSINIDNDLTVVQEKDISEQDQIACIHVAPQLSDVGVVGFWTSGTV-SIIDMSTLEPI 612

Query: 620 DCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTG 679
               +      +S P  L+  +V  +  G        +LF+     N V F    D+   
Sbjct: 613 HGESLRRSADDASIPRDLVLAKVLPNAPG-------MTLFIAMEDGNVVTFNIGEDLT-- 663

Query: 680 QLSDSRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAA 738
             S  +S  LG R  +   +    G  ++   +  P L Y   GR + + ++ E      
Sbjct: 664 -FSGRKSVILGTREARFHLLPQQDGIYSIFATTEHPSLIYGSEGRIIYSAVTAEDATCVC 722

Query: 739 SFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
            F S+     V+    N +R+  I+   +T +  +L L    RR    P +K
Sbjct: 723 PFDSEAFPGAVILSTENEIRISEIDTARQT-HVRSLELGEMVRRIAYSPSEK 773


>gi|449693281|ref|XP_004213384.1| PREDICTED: splicing factor 3B subunit 3-like, partial [Hydra
           magnipapillata]
          Length = 68

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 620 DCMQILSVQSVSSPPESLLFLEVQASVGGEDG-ADHPASLFLNAGLQNGVLFRTVVDMVT 678
           DC++ LS+Q++ +  ESL  +E+  +  GE G A +   LFLN GL NGVL RTV+D VT
Sbjct: 1   DCLEPLSMQALPAAGESLCIIEMGGTEVGEKGTAGNAGGLFLNIGLANGVLLRTVLDSVT 60

Query: 679 GQLSDSR 685
           G LSD+R
Sbjct: 61  GDLSDTR 67


>gi|343429611|emb|CBQ73184.1| related to UV-damaged DNA-binding protein [Sporisorium reilianum
            SRZ2]
          Length = 1505

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 157/364 (43%), Gaps = 45/364 (12%)

Query: 420  QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK-NVNDEFDAYIVVSFNN 478
            +I T  G GP  S+R  R G +V +++   +P     +W V   N   ++   +++ F  
Sbjct: 671  RIVTCSGAGPSGSIREARSGASVQDVSSLSIPNA-QQIWPVHAGNDASKYSVGLLLGFAT 729

Query: 479  ATLVL------SIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG--- 529
            +T  L       + +  + ++ +G   T P+LA S +         P  +R  R +    
Sbjct: 730  STAYLHFDAKGDLADATDRLAATGTDLTLPTLAASTVWSSDH---QPQLLRITRSEACLV 786

Query: 530  --------RINEWRTPGKRTIVKVGSN-RLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
                     +++W  P    +    +N   QVV+ALS   L++  V+ +G L+E  K ++
Sbjct: 787  SLNDESASLLHQWVPPKGLEVTAASANVHGQVVLALSDKTLLHLSVE-SGALVEKGKVQL 845

Query: 581  SGDVACLDIASVPEGRKRSRFLAVGSYDN-TIRILSLDPDDCMQILSV--QSVSSPPESL 637
              +V+C+D++ +  G K ++  A G +   TI+I SL     +   SV  Q   + P S+
Sbjct: 846  EHEVSCVDVSPLVAG-KAAQLAACGFWQTRTIQIYSLPELAAVGQSSVVQQRFPAVPRSI 904

Query: 638  LF--LEVQASVGGEDGADHPA-------SLFLNAGLQNGVLFRTVVDMVTGQ-------L 681
            L      + + GG D     +       +  L  GL +G L    + + T         L
Sbjct: 905  LLHRFASKQTDGGSDTQSKGSLSNRDALTPHLLIGLGDGTLVSYSLSLPTHDSYSKTVGL 964

Query: 682  SDSRSRFLGLRPPKLFSVVVGGRAAMLCLS-SRPWLGYIHRGRFLLTPLSYETLEYAASF 740
            SD+++  LG +  KL ++     A ++ +S SRP L Y    RF    L Y+     A+ 
Sbjct: 965  SDAKTVSLGTQALKLDALETAAGARVVAVSGSRPTLVYADSKRFSYNALKYKDQRTVATL 1024

Query: 741  SSDQ 744
             + Q
Sbjct: 1025 HAGQ 1028


>gi|157110889|ref|XP_001651294.1| cleavage and polyadenylation specificity factor cpsf [Aedes
           aegypti]
 gi|108883895|gb|EAT48120.1| AAEL000832-PA [Aedes aegypti]
          Length = 1417

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 116/568 (20%), Positives = 216/568 (38%), Gaps = 121/568 (21%)

Query: 42  RPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKI 101
           RP N  ++E + +  +FG I S+    L GSQ+D +++     ++ +++++P       +
Sbjct: 59  RPPNM-KLECMATYTLFGNIMSMQSVSLAGSQRDALLISFQDAKLSVVQFDPDNFELKTL 117

Query: 102 HQETFGKSGCRRIVPGQY----LAVDPKGRAVMIGACEKQKLVYVLNRDTA--------- 148
               F +   +    G Y    + VDP  R  ++    ++ +V    +D++         
Sbjct: 118 SLHYFEEEDIKGGWTGHYHTPIVRVDPDNRCAVMLVYGRKLVVLPFRKDSSLDEIEVQDV 177

Query: 149 -------ARLTISSPL------EAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDS 195
                   +L   +P+      E  +S   + ++  ID  F +  +    L   E  +  
Sbjct: 178 KPMKKAPTQLIAKTPILASYVIELKESEERIDNV--IDIQFLHGYYEPTLLILYEPVKTF 235

Query: 196 TGQAASEAQKNLTFYELDLGLNHVSRK----WSE---PVDNGANMLVTVPGGGDGPSGVL 248
            G+ A  +    T   + L LN   R     W+    P D    + ++ P GG      L
Sbjct: 236 PGRIAVRSD---TCMMVALSLNIQQRVHPVIWTVNCLPFDCLQAIAISKPIGG-----CL 287

Query: 249 VCAENFVIYKNQGHPDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFF----FL 298
           + + N +IY NQ  P     +   AD      L  + GV I   A    +  F      +
Sbjct: 288 ILSVNALIYLNQSVPPYGVSLNSIADHCTNFPLKPQDGVRISLDAA---QVCFIEPEKLV 344

Query: 299 LQTEYGDIFKVTLEHDN-EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
           L  + G+++ +TL  D+   V         +  +T  +CV++  YLF  S  GN  L +F
Sbjct: 345 LSLKGGELYVLTLCADSMRSVRSFHFSKAASSVLTCCICVVEEEYLFLGSRLGNSLLLRF 404

Query: 358 QAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVE----------------- 400
           +        E   S ++  ++  + V  +P+ L    R+EQ E                 
Sbjct: 405 K--------EKDESMVITIDDTEEVVEKEPKRL----RLEQEELEVYGSGQKTSVQLTSY 452

Query: 401 ---------SLMPIMDMRIANLFEEEAP---------------QIFTLCGRGPRSSLRIL 436
                    ++ PI  M +     EE                 +I T  G G   +L +L
Sbjct: 453 IFEVCDSILNIGPIGHMAVGERISEEEQDENKDVQFVPNKLDLEIVTSSGHGKNGALCVL 512

Query: 437 RPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSG 496
           +  +    +    L G             D+  +++++S    T+VL  G+ + E+ ++G
Sbjct: 513 QNSIKPQVITSFGLSGCLDV---------DDMHSFMILSQEAGTMVLQTGDEINEIENTG 563

Query: 497 FLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           F    P++ V  IG +  ++QV    IR
Sbjct: 564 FATNVPTIHVGNIGGNRFIVQVTTKSIR 591


>gi|417406474|gb|JAA49895.1| Putative mrna cleavage and polyadenylation factor ii complex
           subunit cft1 cpsf subunit [Desmodus rotundus]
          Length = 1444

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 126/637 (19%), Positives = 237/637 (37%), Gaps = 123/637 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR------------------ 42
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEAPTKNDRSTEGK 60

Query: 43  --PENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK 100
              E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    
Sbjct: 61  AHREHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKT 120

Query: 101 IHQETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSP 156
           +    F     + G  + V    + VDP GR   +     + +V    R++ A       
Sbjct: 121 LSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLM 180

Query: 157 LEAHKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
            E  +S  +   I             +D  F +  +    L   E +Q   G+ A   Q 
Sbjct: 181 GEGQRSSFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QD 239

Query: 206 NLTFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
             +   + L +        W   S P D    + V  P G     GV++ A N ++Y NQ
Sbjct: 240 TCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQ 294

Query: 261 GHPD----VRAVIPRRADLPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEH 313
             P     + ++       P      + +     Q     +   ++  + G+I+ +TL  
Sbjct: 295 SVPPYGVALNSLTSGTTAFPLRTQEGVRTTLDCAQAAFISYDKMVISLKGGEIYVLTLIT 354

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQF---------QAI- 360
           D   +  ++  +FD      +T+SM  ++ GYLF  S  GN  L ++          A+ 
Sbjct: 355 DG--MRSVRSFHFDKAAASVLTSSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEAPASAVR 412

Query: 361 -GADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI----------------EQVESLM 403
             AD +  +S    ++   G+      P+   + + +                E  +S++
Sbjct: 413 EAADKEEPSSKKKRVDPTVGWSGGQSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSIL 472

Query: 404 PIMDMRIANLFE--------EEAPQ----IFTLCGRGPRSSLRILRPGLAVSEMAVSQLP 451
            I     A + E        + +P+    I    G G   +L +L+  +    +   +LP
Sbjct: 473 NIGPCANAAMGEPAFLSEEFQNSPEPDLEIVLCSGYGKNGALSVLQKSIRPQVVTTFELP 532

Query: 452 GVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGE 487
           G    +WTV   V  E +                         ++++S  ++T++L  G+
Sbjct: 533 GC-YDMWTVVAPVRKEQEETPKGEGTEQEPITPETEDDGRRHGFLILSREDSTMILQTGQ 591

Query: 488 TVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
            + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 592 EIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 628


>gi|406700450|gb|EKD03620.1| hypothetical protein A1Q2_02097 [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 1119

 Score = 64.3 bits (155), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 91/420 (21%), Positives = 162/420 (38%), Gaps = 56/420 (13%)

Query: 293 TLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
           T+   LL  EYG +  V  E ++    ++ +     +   +S+  L +GYLF+AS  G+ 
Sbjct: 286 TVLAVLLGDEYGRLTAVGWEFEDMEKVQVGMIDMGVVSAPSSLTYLDNGYLFSASACGDS 345

Query: 353 ALYQFQAIGADPDVEASSSTLMETEE-----GFQPVFFQPRGLKNLVRIEQVESLMPIMD 407
            L        +   + S     +  +      ++ V  +P+  +  VR E+  ++ P  D
Sbjct: 346 LLVYLVLPSPNSTRQPSGKGKEKAHDISDAGAYEIVTAEPQHGRVDVR-ERWMNIAPAKD 404

Query: 408 MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSE-MAVSQLPGVPSAVWTVKKNVND 466
             I    +     +    G    +S R++R G+     M + ++PG+   +WT+      
Sbjct: 405 FAIVKEDDGRVSHVVVASGSASSNSFRVVRSGVGFENLMTIEEIPGI-ERMWTIPAADGP 463

Query: 467 EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 526
                ++VSF  +T +L +   V     +  +   P+ A  L+    L+QV P GIR   
Sbjct: 464 S----LLVSFAYSTTILQLEPEVSVFKAADQVTAVPTFAAGLVDKSLLLQVTPEGIRLWS 519

Query: 527 E------DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEM 580
           +       G ++    P    IV         V A   G +  F     G L EV K   
Sbjct: 520 DLAAGTLAGNVD---APEDNRIVTANVRGNIAVAAFRDGTVTLFRASSQG-LQEVVKG-- 573

Query: 581 SGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFL 640
                               FLA+  +   I +++++  D   +L     ++   SL F 
Sbjct: 574 --------------------FLAIADWCGEIELVAVEGADQGTVLKSIREAAYATSLQFQ 613

Query: 641 EVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSR-SRFLGLRPPKLFSV 699
           E           + P  +   AGL +G      V +   + SD+R +  LGLRP +L ++
Sbjct: 614 ESN---------NEPTRML--AGLSDGTFVSYSVKLNGAECSDNRHASSLGLRPLRLITL 662


>gi|300175351|emb|CBK20662.2| unnamed protein product [Blastocystis hominis]
          Length = 125

 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)

Query: 1086 MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHM 1145
            M  +V F+ G +VTSL K +L   G E ++Y T+ G++G++   +S + ++    LE  +
Sbjct: 1    MSLLVCFYAGAIVTSLFKQTL-QQGKELLVYATIYGTIGSLTPIASIETLETVVALESII 59

Query: 1146 RQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKL 1205
              +   L GR+   YRS + P   V DG +C +F      +Q++IAD    +  +I++ L
Sbjct: 60   IGKGISLVGRNVDDYRSLFLPSTGVADGAICMRFFRYPPAVQKEIADRFGSSVSDIMETL 119

Query: 1206 EEI 1208
             +I
Sbjct: 120  LKI 122


>gi|402592185|gb|EJW86114.1| CPSF A subunit region family protein [Wuchereria bancrofti]
          Length = 278

 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 120/278 (43%), Gaps = 41/278 (14%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLR-KCENKLFPN-TIVSIN 991
            + L+++ +++G   ++    G+L+  +   +RL++    + LR +C +  F N T + + 
Sbjct: 12   MRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELRLECSD--FDNVTALYLK 69

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIY 1051
            T  D I VGD+  S     Y+  E+     A D +  W++A   ID D   GA+   N++
Sbjct: 70   TKNDLILVGDLMRSLSLLSYKSMESTFEKVARDFMTNWMSACEIIDSDNFLGAENSYNLF 129

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV---- 1107
             V   +D     +E+ T                +++E+  F++G++V      SL     
Sbjct: 130  TVM--KDSFTVFKEEGT----------------RLQELGLFYLGEMVNVFCHGSLTATQV 171

Query: 1108 ---PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ--EHPPLCGR-DHMAYR 1161
               P    S++YGT  G +G ++          ++ L+   ++  E+   C R  H  YR
Sbjct: 172  DVAPLYHSSILYGTSDGGIGVIVQMPPV----LYTFLQDVQKRLAEYAENCMRISHTQYR 227

Query: 1162 SAYFPVKD-----VIDGDLCEQFPTLSLDLQRKIADEL 1194
            +     +       IDGDL E    +  D   ++ + L
Sbjct: 228  TFETEKRSEAPNGFIDGDLIESLLDMGKDSVEQVVNGL 265


>gi|390347522|ref|XP_003726804.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Strongylocentrotus purpuratus]
          Length = 1439

 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 88/402 (21%), Positives = 155/402 (38%), Gaps = 54/402 (13%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELL---------------RPEN 45
           MY +   +  PTG+   +  +F       +VVA+G  L +                +P+N
Sbjct: 1   MYAFYREIHPPTGVEHCVYCHFFSPDQQNLVVAKGSELTVYSMITVDSNKPTDKESKPKN 60

Query: 46  SGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET 105
             ++E   +  IFG + S+   ++TGS +D +++   + ++ I+EY+P+ +    +    
Sbjct: 61  --KLEEAATFHIFGKVMSMQSAQVTGSGRDALLLSFMNAKVSIVEYDPNMHDLKTLSMHY 118

Query: 106 F----GKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHK 161
           F     K G  R +    + VDP  R  ++     + +V    RD        S   + +
Sbjct: 119 FEEDETKEGVYRNIFHPVVKVDPDHRCAIMLTYGSKLVVLPFRRDGLVEDLDKSMSASTR 178

Query: 162 SHTIVYSICGIDCGFDNPIFAAIELDYSEADQDST---------GQAASEAQKNLTFYEL 212
              ++ S        D+PI   +++ +     + T           A   A +  T   +
Sbjct: 179 RGALMPSYVIRLNEMDDPICNVLDIQFLHGYYEPTLLILYEPLRTWAGRVAVRQDTCSIV 238

Query: 213 DLGLNHVSRK----WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDV 265
            L LN   +     WS+   P D      V  P G     GVL+ A N ++Y NQ  P  
Sbjct: 239 ALSLNMAQKVHPIIWSQSSLPYDCMQVQAVPKPIG-----GVLILAVNSLLYLNQSIPPY 293

Query: 266 RAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEHDN- 315
              +    D      L  + GV +    T  Q T   +    L  + G+I+ +TL  D  
Sbjct: 294 GVSLNSLTDWSTAFPLKTQEGVKLSMDCT--QATFISYDRLALSLKDGEIYVLTLLVDGM 351

Query: 316 EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
             V    +       +T  +C +  G+LF  S  GN  L ++
Sbjct: 352 RSVRGFHLDKAAASVLTTCICPMGDGFLFLGSRLGNSLLLKY 393



 Score = 40.0 bits (92), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 17/109 (15%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           ++ T  G G   +L +L+  +    +    LPG    +WTVK     + D          
Sbjct: 499 ELVTTSGYGKNGALSVLQRTIRPQVVTTFNLPGCLD-MWTVKSLKKAKADEKSEESETSP 557

Query: 470 ------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDD 512
                 A++++S  ++++VL  G+ + EV+  GF    P++  S +GDD
Sbjct: 558 EDKDRHAFLILSKQDSSMVLQTGQEITEVAAGGFSTQAPTIFASNMGDD 606


>gi|223994993|ref|XP_002287180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976296|gb|EED94623.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1517

 Score = 63.5 bits (153), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 101/476 (21%), Positives = 187/476 (39%), Gaps = 105/476 (22%)

Query: 227 VDNGANMLVTVP-GGGDGPSGVLVCAENFVIYKNQGHPDVRAV---------IPRRADLP 276
           +D G+  L+ +P        GVL+  +  + Y + G    R +             AD  
Sbjct: 346 IDGGSAALIAIPPSKTSALGGVLILGQRQITYHHTGEGITRTLPIGSSLLYSYCLVADKD 405

Query: 277 AERGV--------LIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDT 328
           A+R +         I+  +T R   L   L  T  G          +  V+ L ++   T
Sbjct: 406 ADRNINNNAPVLKYILGDSTGRIHLLTILLNVTPEG--------KGDGCVTTLLMETLGT 457

Query: 329 IPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR 388
               +++  L  G LF  S+FG+  L +      D  V  S     E EE        P 
Sbjct: 458 ASSASAVVYLGKGCLFVGSQFGDSQLLKI----LDAPVPLSGGRDDEGEEK------NPL 507

Query: 389 GLKNLVRI-EQVESLMPIMDMRI-----------ANLFEEEAPQ-------IFTLCGRGP 429
                +R+ ++  +L PI+D  +            N   +   +       + T  G G 
Sbjct: 508 EETTYLRLLDEYTNLGPIVDFDLRPCSDATSGGHGNAKNDSKSRDQHRQSLVVTCSGVGK 567

Query: 430 RSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGE-- 487
             ++R++R G+ + E A  ++PG+   +W++++   DE D+++V SF   T +L +    
Sbjct: 568 DGTVRLVRNGVGMREHAEVEMPGI-KGMWSLRRTFADEDDSFLVQSFVRETRILGVQSGG 626

Query: 488 ----------------TVEEVSDSGFLDTTPSLAVS--LIGD-DSLMQVHPSGIRHIRED 528
                            + EV+  GF  +  +L     L+G  D L+QV    +R +  +
Sbjct: 627 EAEMEEEDDEDQEEGGALAEVTIPGFSSSKSTLFAGNLLVGSSDLLLQVVEDSVRLVNSE 686

Query: 529 GR--INEWR------------TPGKRTIVKVGSNRLQVVIALSGGELIYF--EVDMTGQL 572
               + EW              P     V   ++  Q+V+AL GG L+Y   E D +  +
Sbjct: 687 TLELVTEWSPFSNDNEGSDDDEPLGFITVASANSSGQIVVALRGGTLVYLVVEGDASPSI 746

Query: 573 LEVEKHEMSGDVACLDIASVP-----------EGRKRSRFLAVGSYDN-TIRILSL 616
             +++  +  +++C+D+               +G   S+ +AVG +D+ ++R+L L
Sbjct: 747 RRLKRVTLDREISCIDLNPFDDTAVGGNTMDVDGGHHSKLVAVGLWDDFSVRLLDL 802



 Score = 48.5 bits (114), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 82/208 (39%), Gaps = 41/208 (19%)

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            VGD+  S    +Y+   N +   A D    + TA   +   T  G++ F N++ +R   +
Sbjct: 1265 VGDLMRSISLVEYQPKHNVIEELARDYNANFCTAVEMLTNGTYLGSEGFNNLFVLRHNAN 1324

Query: 1059 VSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV----PGG---- 1110
             S E                   A  +++ + ++H+G++       SL+     GG    
Sbjct: 1325 ASSE------------------EARVRLDTVGEYHLGEMTNKFMGGSLIMPSNSGGIMGA 1366

Query: 1111 -----GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS--- 1162
                 G   ++GTV GS+G++L         F + L+  +      +    H  YR+   
Sbjct: 1367 QNAYVGSQTLFGTVDGSIGSVLGLDG-PTFAFLACLQRAILSIVKTVGDISHEEYRAFRA 1425

Query: 1163 --AYFPVKDVIDGDLCEQFPTLSLDLQR 1188
                 P +  IDGDL E F    LDL R
Sbjct: 1426 ERQVRPSRGFIDGDLIETF----LDLNR 1449


>gi|312380158|gb|EFR26239.1| hypothetical protein AND_07834 [Anopheles darlingi]
          Length = 1503

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 120/567 (21%), Positives = 213/567 (37%), Gaps = 108/567 (19%)

Query: 42  RPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKI 101
           RP N  ++E + S  +FG I SL    L GSQ+D +++     ++ +++++P       +
Sbjct: 72  RPPNM-KLECMASYRLFGNIMSLQSVSLAGSQRDALLISFPDAKLSVVQFDPDNFDLKTL 130

Query: 102 HQETFGKSGCRRIVPGQY----LAVDPKGRAVMIGACEKQKLVYVLNRDTAA-RLTISSP 156
               F     R    G Y    + VDP  R  ++    ++ +V    +D++   + +   
Sbjct: 131 SLHYFEDEDIRGGWTGHYHIPLVRVDPDNRCAVMLVYGRKLVVLPFRKDSSLDEIEMQDV 190

Query: 157 LEAHKSHTIVYSICGIDCGF-------DNPIFAAIELDYSEADQDSTGQAASE------- 202
               K+ T++ +   I   +       D  I   I++ +     + T     E       
Sbjct: 191 KPIKKTPTLLIAKTPILASYIIELKDLDEKIDNVIDVQFLHGYYEPTLLILYEPVRTFPG 250

Query: 203 --AQKNLTFYELDLGLNHVSRK----W---SEPVDNGANMLVTVPGGGDGPSGVLVCAEN 253
             A ++ T   + L LN   R     W   S P D    + ++ P GG      LV   N
Sbjct: 251 RIAVRSDTCTMVALSLNIQQRVHPVIWTVNSLPFDCLQAVPISKPIGG-----CLVMCVN 305

Query: 254 FVIYKNQGHPDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFF----FLLQTEY 303
            +IY NQ  P     +   AD      L  + GV I   A    +  F      +L  + 
Sbjct: 306 SLIYLNQSVPPYGVSLNSSADHSTNFPLKPQDGVRISLDAA---QVCFIESEKLVLSLKG 362

Query: 304 GDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGAD 363
           G+++ +TL  D+                  S+CV ++ YLF  S  GN  L +F+     
Sbjct: 363 GELYVLTLCADSMR----------------SICVCETEYLFLGSRLGNSLLLRFREKDES 406

Query: 364 PDVEASSSTLMETEEGFQ-----PVFFQPRGLKNLVRI--------EQVESLMPIMDMRI 410
             +    S  +E E+  Q      +     G K  V++        + V ++ PI  M +
Sbjct: 407 LVITIDDSGTVEKEQKRQRLEEEELEVYGSGYKTSVQLTSYIFEVCDSVLNIGPIAHMAV 466

Query: 411 ANLF---------------EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPS 455
                               +   ++ T  G G   +L +L+  +    +    L G   
Sbjct: 467 GERICEEEMEEGAEVQFVPNKLDVEVVTASGHGKNGALCVLQSSIKPQVITSFGLSGCLD 526

Query: 456 AVWTV---------------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDT 500
            VWTV                 +      A++++S   AT+VL  GE + E+ ++GF   
Sbjct: 527 -VWTVFDEAAGPGGVTGTRKPDDAPPPNHAFMILSQEGATMVLQTGEEINEIENTGFATD 585

Query: 501 TPSLAVSLIGDDS-LMQVHPSGIRHIR 526
            P++ V  IG +  ++QV    IR ++
Sbjct: 586 VPTIHVGNIGSNRFIVQVTTKSIRLLQ 612



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 88/407 (21%), Positives = 165/407 (40%), Gaps = 48/407 (11%)

Query: 833  NGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTT--CLLELQDNEAAFSICTV 890
            NG+D+   +    E++ YP       V    +++P +        + L++ E   S+  V
Sbjct: 1063 NGEDKELTEENKGERFLYPMGHQFSVV----LVNPAAWEIVPDTAIALEEWEHVVSLKNV 1118

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFVE----EGKSL------ELLHK 939
            +   +   + L    A G  F    +I + G + +Y  +E     GK L      E++ K
Sbjct: 1119 SLAYEGARSGLKEYIAVGTNFNYSEDITSRGRLLLYDIIEVVPEPGKPLTKHKFKEVIVK 1178

Query: 940  TQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC--ENKLFPNTIVSINTYRDRI 997
             Q +G   A+    G L+  +G  + L+ +    L+     +  +F + +VSI +    I
Sbjct: 1179 DQ-KGPVSAISHVCGFLVGAVGQKVYLWQMKDDDLVGVAFIDTNIFVHQMVSIKSL---I 1234

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAG---ADKFGN-IYFV 1053
             V D+ +S    +++ +   L + + D  P  +    ++  +T  G   AD   N I ++
Sbjct: 1235 LVADVYKSVSLLRFQDEFRTLSLVSRDYHPLNVYQVEYVVDNTNLGFLVADDQANLITYM 1294

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQG--KLNGAPNKMEEI-VQFHVGDVVTSLQKASLVPGG 1110
              P+        +  GG+    +G   L    N M  +   FH  DV+    + +L    
Sbjct: 1295 YQPE------SRESFGGQRLLRKGDYHLGQRVNAMFRVQCDFHESDVM----RRTLNYDN 1344

Query: 1111 GESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS-------A 1163
              +  + T+ G  G +L    +     F  L+  +    P  CG +  AYR+        
Sbjct: 1345 KHTTFFATLDGGFGFVLPLPEKTYRRLF-MLQNVLLTHSPHTCGLNPKAYRTIKQSRALP 1403

Query: 1164 YFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRN 1210
              P + V+DGDL   F  L  + ++++A ++     EI   L EI +
Sbjct: 1404 INPSRCVVDGDLVWSFLELPANEKQEVAKKIGTRIEEICADLMEIEH 1450


>gi|49476334|gb|AAT66508.1| putative splicing factor 3b subunit 3 [Fragaria x ananassa]
          Length = 37

 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/40 (82%), Positives = 35/40 (87%), Gaps = 3/40 (7%)

Query: 620 DCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLF 659
           DC+ I   QSVSS PESLLFLEVQASVGGEDGADHPA+LF
Sbjct: 1   DCVVI---QSVSSIPESLLFLEVQASVGGEDGADHPANLF 37


>gi|402576293|gb|EJW70252.1| hypothetical protein WUBG_18844, partial [Wuchereria bancrofti]
          Length = 52

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/47 (57%), Positives = 36/47 (76%)

Query: 707 MLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVA 753
           ++  SSR WL Y ++ RF LTPLSY  LE+AA FSS+QC EG+V++A
Sbjct: 1   IMAASSRAWLLYDYQSRFHLTPLSYAALEFAAGFSSEQCPEGIVAIA 47


>gi|402083318|gb|EJT78336.1| hypothetical protein GGTG_03437 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 1155

 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 201/475 (42%), Gaps = 76/475 (16%)

Query: 297 FLLQTEYGDIFKVTLE--HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHAL 354
           ++L  +YG +  +TL+   D   V ++ +           +  L SGYLF  S +G+  L
Sbjct: 297 YILADDYGGLHLLTLDVKEDGVTVKDIIVCLIGKASRANELVCLDSGYLFVGSHYGDSEL 356

Query: 355 YQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLF 414
                +  D D       L+ET                   ++ + S+ PI+D  + ++ 
Sbjct: 357 LCLNLVREDTD-----RPLVET-------------------VQTLPSIAPILDFTVMDMG 392

Query: 415 EEEA------------PQIFTLCGRGPRSSLRILRPGLAVSEMAV-SQLPGVPSAVWTVK 461
             EA             +I T  G     SLR +R G+ + ++ + + +PGV   ++ ++
Sbjct: 393 NREADNTVGNEYASGQARIVTGSGAHRDGSLRSVRSGVRLDDIGILADMPGV-RGLFPLE 451

Query: 462 KNVNDEFDAYIVVSFNNATLVLSIGET--VEEVSDSGFLD-TTPSLAVSLIGDDSLMQVH 518
              N E +A +V SF   T V +      +EEV     LD +  SL V+ +GDDS++Q+ 
Sbjct: 452 S--NGETNA-LVASFLTETRVFTFDAEGDIEEVEAFQGLDLSVRSLLVTNLGDDSILQIT 508

Query: 519 PSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV-DMTGQLLEV 575
             G   I  +    I+ W  P  R I    +N   +++++ G  L+   + D+T   +  
Sbjct: 509 DHGASVIGPEAGITISSWEPPTGRVITGCSTNGKWLLLSIDGKTLVSLRIPDLT---VST 565

Query: 576 EKHEMSGD-VACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSS- 632
           ++     D ++CL  A+ P         AVG + D ++ I++L   D +   +++     
Sbjct: 566 QRESSPNDQISCL--AASPH---LPDIGAVGFWSDGSVSIINLCTLDVIHSETLRRTKDA 620

Query: 633 ---PPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFL 689
              P + +L   + A V G        +LF++      V F T+ D+  G+LS  +S  L
Sbjct: 621 AIVPRDIVLARVLPAEVAG-------PTLFVSMDDGEVVTF-TLNDV--GKLSARKSVVL 670

Query: 690 GLRPPKLFSVV--VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSS 742
           G R  + F V+   G    +   S    L Y    R + + ++ E+  Y   F +
Sbjct: 671 GTRQAR-FHVLPQPGDVCNIFVTSEHSSLIYGSDKRIIYSAVTAESATYVCPFDT 724


>gi|70992271|ref|XP_750984.1| UV-damaged DNA binding protein [Aspergillus fumigatus Af293]
 gi|66848617|gb|EAL88946.1| UV-damaged DNA binding protein, putative [Aspergillus fumigatus
           Af293]
 gi|159124553|gb|EDP49671.1| UV-damaged DNA binding protein, putative [Aspergillus fumigatus
           A1163]
          Length = 1140

 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 176/836 (21%), Positives = 313/836 (37%), Gaps = 123/836 (14%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y + + + + I  A+  NF   +   +VVA+   LE   P   G ++ + S  I+  +  
Sbjct: 3   YVVPIHRASSIRHALKLNFMNPEEDCLVVAKSNRLEFYSPTPDG-LDLVASCAIYARVTM 61

Query: 64  LAQFRL-TGSQKDYIVVGSDSGRIVILEYNPS-KNVFDKIHQETFGKSGCRRIVPGQYLA 121
           LA+      S  D++ VG+D      L ++ S K V  +           R    G    
Sbjct: 62  LARLPAPANSPTDHLFVGTDRYTYFTLSWDSSEKRVRTERDYVDMSDPSSRESQTGNRCL 121

Query: 122 VDPKGR---------------AVMIGACEKQKLVYVLNRDTAARL-TISSPLEAHKSHTI 165
           +DP GR                + + + ++ + V + +   A R+  +  P  A      
Sbjct: 122 IDPSGRFMTLEIYEGVIAVIPIIQLPSKKRGRAVALPSGPDAPRVGELGEPTTARIEELF 181

Query: 166 VYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVS-RKWS 224
           V S   +      P  A +     E +Q        E Q     Y    G N  +   + 
Sbjct: 182 VRSSAFLHVQEGLPRLALL----YEDNQKKVRLRVRELQ-----YHAATGSNSTADATFG 232

Query: 225 EPVDN------GANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPA 277
           EP D       G++ L+ VP     P  G+L+  E  + Y +    D   +I R  D   
Sbjct: 233 EPADFTQDLELGSSHLIPVPA----PLGGLLILGEMSIKYVDA---DNNEIISRPLD--- 282

Query: 278 ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIPVTASMC 336
           E  + +       Q+    +LL  +YG +F + L  D++  V   K+ +       + + 
Sbjct: 283 EATIFVAWEQVDSQR----WLLADDYGRLFFLMLVLDSDSQVESWKLDHLGNTSRASVLV 338

Query: 337 VLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI 396
            L  G LF  S  G+    Q   I   P                            L  +
Sbjct: 339 YLGGGILFLGSHQGDS---QVLRISNGP----------------------------LEVV 367

Query: 397 EQVESLMPIMDMRIANL-----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEM 445
           + + ++ PI+D  I +L           F     +I T  G     +LR +R G+ + E+
Sbjct: 368 QTLSNIAPILDFTIMDLGNRSSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEEL 427

Query: 446 AVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL---SIGETVEEVSDSGFLDTTP 502
            V       + +W ++   + +F   ++V+F + T V    S GE VEE+     L  + 
Sbjct: 428 GVLGDMDHITDLWGLQVGSSGDFLDTLLVTFVDETRVFRFSSDGE-VEEMDHFLGLSLSE 486

Query: 503 S--LAVSLIGDDSLMQVHPSG--IRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSG 558
           S  LA +L G   ++QV      I  I     I EW  P +  I    +N   +V+ ++G
Sbjct: 487 STLLATNLPGG-RILQVTEQRVLIAEIEGGMVIYEWTPPNQFIITAASANDDSIVL-VAG 544

Query: 559 GELIYFEVDMTGQLLEVEKHEMSGD--VACLDIASVPEGRKRSRFLAVGSYDNTIRILSL 616
           GEL+   +++T ++  V + +   D  ++ + + S P G   + F  +      + +L L
Sbjct: 545 GELVTV-LNITNEVQVVTQKDFGADSQISGVTVPSSPTGVCIAGFPQLAK----VSVLKL 599

Query: 617 DPDDCMQILSVQSVSSP-PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVD 675
                +   SV       P S+L   V          D P +LF++  + +G +     +
Sbjct: 600 QDLSELHTTSVGMAGEAFPRSVLVANVL--------TDSPPTLFVS--MADGSVITYSFN 649

Query: 676 MVTGQLSDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETL 734
                L+      LG   P    +  G G   +      P + Y   GR + + ++ E  
Sbjct: 650 TNNFSLTGMTKLILGSEQPTFKKLPRGSGLFNVFATCENPSMIYGSEGRIIYSAVNSEGA 709

Query: 735 EYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
                F+S+   E +     + L++  +++   T  +T LP+  T RR    P +K
Sbjct: 710 SRICHFNSEAYPESIAVATSHDLKIALVDKERTTQIQT-LPIGATVRRVAYSPSEK 764


>gi|426195893|gb|EKV45822.1| hypothetical protein AGABI2DRAFT_72896 [Agaricus bisporus var.
           bisporus H97]
          Length = 1229

 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 110/509 (21%), Positives = 204/509 (40%), Gaps = 70/509 (13%)

Query: 328 TIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA----SSSTLMETEEGFQPV 383
           T+P+   + V+ S      S F   A  + +A    P+ +A     S T+   E G    
Sbjct: 394 TLPIPCDVHVIPS------SSFDISAFKKGKARATSPEFDAMDLDGSDTVSPQESGN--- 444

Query: 384 FFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVS 443
             + RG   L  +E+ +++ PI+D  + +  +    QI T  G     S+  +R G    
Sbjct: 445 IVETRG-SYLNVLERFKNIAPILDACLVDP-DSGQRQIVTCSGGKNTGSINAVRNGADFE 502

Query: 444 EMAVSQLPGVPSA--VWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVS-------- 493
           E+    +PGVP    +W VK  + +  D+++++SF N++ ++ I ++ + +S        
Sbjct: 503 EIV--NIPGVPHVLKIWAVKSRLEEAEDSFLLLSFCNSSSLIKINDSGDNISFAPFDNAI 560

Query: 494 DSGFLDTTPSLAVSLI-----GDDS---------LMQVHPSGIRHIREDG------RINE 533
            SG +   P++A + +     G D          ++QV  SG   +  D       RI+E
Sbjct: 561 ASGLVTVEPTIAFANVAQRVKGQDGKARYMNSSLVVQVTGSGAFLLELDQGLQTYIRIDE 620

Query: 534 WRTPGKRT------IVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV----EKHEMSGD 583
           W             IV    N  QV +A+SGG+L    V    +L  V           +
Sbjct: 621 WNAKKNVADGITPEIVAASINSSQVALAISGGKLALLSVAEDKKLRVVVSTLNDCNRQPE 680

Query: 584 VACLDIASVPEGRKRSRFLAVGSYD-NTIRILSLDPDDCMQILSVQSVSSPPESLLFLEV 642
           ++ +  + +   R  S+ + V  ++ N I + +        +     + S   SL F   
Sbjct: 681 ISAISCSPLNPARAFSQHIVVSYWESNIIEVFTPSDSGFRSVCKSSPLPSLVSSLRFYNF 740

Query: 643 QASVGGEDGADHPASLFLNAGLQNGVL--FRTVVDMVTGQLSDSRSRFLGLRPPKL-FSV 699
            +    +    HP   +L AGL +G +  FR        +L + +   LG  P  L    
Sbjct: 741 GSDQSSKGADYHP---YLLAGLSDGSVATFR----WQDQELKERKIVSLGHAPVSLAVCS 793

Query: 700 VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRV 759
           ++G    +L    R  +    RGR + +P+    +  A+  ++      +V+     L +
Sbjct: 794 ILGDAKTVLAAGDRAVVFAYERGRLVYSPILLRNIAAASPLNTSSLPMSLVAATAEGLHI 853

Query: 760 FTIERLGETFNETALPLRY-TPRRFVLQP 787
             I+ L +  +  ++P     PR+   QP
Sbjct: 854 GKIKDLNK-LHIRSIPFGLDNPRKITHQP 881


>gi|336263557|ref|XP_003346558.1| hypothetical protein SMAC_04731 [Sordaria macrospora k-hell]
 gi|380090453|emb|CCC11749.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1149

 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 156/812 (19%), Positives = 309/812 (38%), Gaps = 85/812 (10%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +P+ +  A+  N    +   +++A+   +E+ +  + G +  + S  I G I  
Sbjct: 3   YVAPIHRPSSVRHALRINLLSPEEESLIIAKTNRIEIWKLAD-GHLSMIHSKVINGTITI 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQ---YL 120
           L + +      D + VG+D       E++        +++  F   G R +   Q     
Sbjct: 62  LQKLQPKDHPTDLLFVGTDQFEYFTAEWDHETQQLKTLNR--FSDPGERHMRDSQSQDKC 119

Query: 121 AVDPKGRAVMIGACEKQKLVYVL--NRDTAARLTISSPLEAH----KSHTIVYSICGIDC 174
            VDP GR + +   E    V+ L   + TA  L I   +       K  T +Y+  GI  
Sbjct: 120 IVDPSGRFMAMHLWEGVLSVWRLGNRKSTATTLDILVQVRLSELFIKGSTFLYTETGI-- 177

Query: 175 GFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPVDNG--AN 232
               P  A +   Y      +  + A++ + +    +   G+    +K  E V      N
Sbjct: 178 ----PKVAFL---YRNQANSNETKLATDREIDADVEDPGAGILIPVKKVEEEVKRHHFRN 230

Query: 233 MLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQK 292
                P  G    G++V  E  ++Y ++       V   + +   +   + V+ A +   
Sbjct: 231 TEQAKPHVG----GLIVIGETRLLYIDE-------VTKTQVESALKEPSIFVAWAEY-DP 278

Query: 293 TLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
           T +F  L  +YG++  +T+  +   V+ + +           +  L    LF  S +GN 
Sbjct: 279 THYF--LADDYGNLHLLTILTEGAVVTGMDVSNIGRTARAHVLTYLGDDMLFVGSHYGNS 336

Query: 353 ALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDM---- 408
            LY+   +  D +       L++  E   P+                 +   IMDM    
Sbjct: 337 QLYRLNLLNEDLN---EILQLVQVLENIGPI-----------------TDFTIMDMGNRE 376

Query: 409 ---RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN 465
              ++ N +     +I T  G     +LR +R G+ + ++A+        A+++++   +
Sbjct: 377 NDSQLGNEYSSGQARIVTASGIFKDGTLRSVRSGVGLQDIAILGELQHTRALFSLQSYNS 436

Query: 466 DEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTT-PSLAVSLIGDDSLMQVHPSG 521
              D  +V SF   T +      GE +EEV+D   +D    +L  + + +  L+QV  + 
Sbjct: 437 SRADT-LVASFLTDTRIFRFDPHGE-IEEVADYCGMDLQHQTLLTTNLDNGQLLQVTTAA 494

Query: 522 IRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHE 579
              +  +    I  W   G R I+   +N+  +++++ G  L+   +D    +++ +   
Sbjct: 495 ATLLDAESGVTIASWAPEGDRQIINASANKHWLLLSVQGTTLVSINIDNDLTVVQEKDVS 554

Query: 580 MSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLF 639
               +AC+ +A          F   G+  + I + +L+P     +      +S P  ++ 
Sbjct: 555 EQDQIACIHVAPQLSDVGVVGFWTSGTV-SIIDMSTLEPIHGESLRRSADDASIPRDIVL 613

Query: 640 LEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
            +V  +  G        +LF+     N V F    D+     S  +S  LG R  +   +
Sbjct: 614 AKVLPNTPG-------MTLFIAMEDGNVVTFNIGEDLT---FSGRKSVILGTREARFHLL 663

Query: 700 -VVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALR 758
               G  ++   +  P L Y   GR + + ++ E       F S+     VV      ++
Sbjct: 664 PQQDGIYSIFATTEHPSLIYGSEGRIIYSAVTAEDATCVCPFDSEAFPGAVVLSTETEIK 723

Query: 759 VFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
           +  I+    T +  +L L    RR    P +K
Sbjct: 724 ISEIDTARRT-HVRSLELGEMVRRIAYSPSEK 754


>gi|358380497|gb|EHK18175.1| hypothetical protein TRIVIDRAFT_80808 [Trichoderma virens Gv29-8]
          Length = 1161

 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 165/847 (19%), Positives = 313/847 (36%), Gaps = 125/847 (14%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +PT I  A+   F      ++VVA+   LE+ R    G +  L +  I G I  
Sbjct: 3   YVAPVHKPTSIRHALRIRFLSPDIEDLVVAKANRLEIWRVTEEG-MTCLHTKVIHGTIDM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSG--CRRIVPGQYLA 121
           L + +   S  D + +G+D  +   + +NP  N  D + Q     +    R+        
Sbjct: 62  LQRLQPKDSATDLLFIGTDRLQYFNIAWNPETNQLDAVEQTIHDSAEPYMRQSQSQNRCL 121

Query: 122 VDPKGRAVMIGACEKQKLVYVLN--RDTAARLTISSPLEA----HKSHTIVYSICGIDCG 175
           VDP G+ + +   E    V+ L   +    RL +   +       KS   ++S  G    
Sbjct: 122 VDPTGKFMAMHLWEGVLNVFRLRIRKGLTTRLEVLDQVRLTELWMKSSVFLHSRTG---- 177

Query: 176 FDNPIFAAI---ELDYSEA-------DQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE 225
             +P  A +   +LD  EA        +D  G  +S+    L   ELD  +         
Sbjct: 178 --HPRIAFLYKNQLDREEARVAVYRLTEDDKGGVSSKFDP-LKDRELDQVIP-------- 226

Query: 226 PVDNGANMLVTVP-------------GGGDGPSGVLVCAENFVIYKNQ-GHPDVRAVI-- 269
             D  A+ML+ VP             G      G+LV  E  + Y +   +  V + I  
Sbjct: 227 --DPYASMLIPVPVYEEKRYHVRNNEGARAHLGGLLVVGETLLTYFDSLTYSSVCSSIED 284

Query: 270 PRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTI 329
           P+           I  A      T +F  L  +YG +  + ++  NE    + +   +  
Sbjct: 285 PK-----------IYVAWAEYDGTHYF--LADDYGRLDLLEIKTTNESTG-VVVTGMEVH 330

Query: 330 PVT-----------ASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEE 378
           P+T           +S+  + +  LF  S  G+  L          D+E    +L++   
Sbjct: 331 PITFQDSSRYTSRASSLVYMGNNLLFIGSHHGDSQLLHI-------DIETQQMSLVKVLS 383

Query: 379 GFQPVF-FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILR 437
              P+  F    L N              D +  N F     +I   CG     SLR +R
Sbjct: 384 NNAPIMDFTIMDLGNREG-----------DAQSGNTFSSGQARIVAGCGAYQDGSLRSIR 432

Query: 438 PGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEV-SDSG 496
            G+ + +  +         ++T++   +++ D  I+ +     ++    + +EE+ S  G
Sbjct: 433 SGVGLEDRGLLDEFQGTRGLFTLRSVESEKVDTVIISTLTGTRVLRFEPDNIEELYSFQG 492

Query: 497 FLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVI 554
               + +L  + + +  L+Q+ P  +  +  D    +  W++P  + I    +N    ++
Sbjct: 493 IDLESETLLAANLPNGQLLQITPRVVNVLDPDSGTSLCSWQSPEGKVITAASANTKWALL 552

Query: 555 ALSGGELIYFEV--DMTGQLLEVEKHEMSG---DVACLDIASVPEGRKRSRFLAVGSYDN 609
           ++ G  L+   +   +   +    +  +SG    ++CL  A  P+      +   G+  +
Sbjct: 553 SIDGSILVSLNLLDGLKAVVKNASQDSVSGQPDQISCLHAARDPQDFGVIGWWTSGTI-S 611

Query: 610 TIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL---FLNAGLQN 666
            + + +L P     +      SS P  +  +++           HP  +    +   L++
Sbjct: 612 VVDLATLTPIHGEPLRQTDDSSSVPRDVALVQL-----------HPPDISGPTMLVALED 660

Query: 667 GVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGYIHRGRFL 725
           G +    V +    +S  ++  LG  P +L  +    G   +   +    L Y   GR +
Sbjct: 661 GNVISFNVSVKGFSISGRKTVTLGSGPARLHVLPQADGICNVFATTEHASLIYSSEGRVV 720

Query: 726 LTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI--ERLGETFNETALPLRYTPRRF 783
            +  + +   + A F S+   + +V      +R+  +  ERL       ALP+  T RR 
Sbjct: 721 YSATTADDATFVAPFDSEAFPDSIVLSTEEHIRICHVDNERLTHV---KALPMSETVRRV 777

Query: 784 VLQPKKK 790
              P  K
Sbjct: 778 AYSPGLK 784


>gi|170589359|ref|XP_001899441.1| Xeroderma Pigmentosum Group E Complementing protein [Brugia malayi]
 gi|158593654|gb|EDP32249.1| Xeroderma Pigmentosum Group E Complementing protein, putative
           [Brugia malayi]
          Length = 521

 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 120/560 (21%), Positives = 220/560 (39%), Gaps = 82/560 (14%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y +T  +PT +  A+ G+F       +V+A+   +EL      G ++      +FG I +
Sbjct: 5   YIVTAYKPTVVTHALVGSFIVPTELNLVLAKTNRVELFLVTPEG-LKPHRECSVFGRIAT 63

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVD 123
           +  FR  G   D +++ +    + I+ + P+  +  +       + G R    G    V 
Sbjct: 64  IKLFRAPGENVDSLLILTAKYHLAIIRWTPTSELRTRASGHIVDRVG-RPSETGMIATVH 122

Query: 124 PKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF----DNP 179
             G            +V+ L       +  +   +    +     +  +D  F    D P
Sbjct: 123 SSGL-----------MVFRLYDGLLKVVQWNEGKDLRGFNVRCDDLYIVDITFMSDPDRP 171

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVP 238
             A I        QD  G+       N+   EL       S  W  + ++  AN+++ VP
Sbjct: 172 TLAYIY-------QDDNGRHIKVVALNIDDKELS------SPLWKHDNLEGEANIVIGVP 218

Query: 239 GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFL 298
              +   G L+   + + Y   G   +R      + L               Q+    +L
Sbjct: 219 ---EPVGGCLIAGPDAISYHKGGDDALRYAGVPGSRLHNTHPNCYAPVDRDGQR----YL 271

Query: 299 LQTEYGDIFKVTLE--HDNE-------HVSELKIKYFDTIPVTASMCVLKSGYLFAASEF 349
           L    G+++ + LE   D E       +V ++K++      +   MC L +G  F  S F
Sbjct: 272 LADLAGNLYMLLLELGKDQEQDENSAMYVRDMKVESLGETCIAECMCYLBNGVCFIGSRF 331

Query: 350 GNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR--GLKNLVRIEQVESLMPIMD 407
           G+  L +                             +PR  G   +  ++   +L PI D
Sbjct: 332 GDSQLIRLST--------------------------EPRADGTGYISLLDSYTNLAPIRD 365

Query: 408 MRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE 467
           M +     ++  QI T  G     ++RI+R G+ + E+A  +L G+ + ++T++   +DE
Sbjct: 366 MTVMRCNGQQ--QILTCSGAYKDGTIRIIRNGIGIEELASVELKGIKN-MFTLRTR-DDE 421

Query: 468 FDAYIVVSFNNATLVLSI-GETVEEVSDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHI 525
           FD Y+++SF++ T VL I GE +E+   +GF +D     A  L    +++QV    +  I
Sbjct: 422 FDDYLILSFDSETHVLLINGEELEDTEITGFTVDGATLWAGCLFHSKTILQVTHGEVILI 481

Query: 526 REDGRINEWRTPGKRTIVKV 545
             D  I  W++    T+V V
Sbjct: 482 DGD-NIQVWKSSKWITLVAV 500


>gi|387219217|gb|AFJ69317.1| dna damage-binding protein 1a, partial [Nannochloropsis gaditana
           CCMP526]
          Length = 383

 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 164/408 (40%), Gaps = 93/408 (22%)

Query: 531 INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH-EMSGDVACLDI 589
           ++EW +     I     N +QVV+ALSGGE++Y E+    + LE +    +  +V+CL +
Sbjct: 29  LSEWISAHGTRITVAAGNAMQVVLALSGGEVVYLELKANQRALEEKARIHLEHEVSCLSV 88

Query: 590 -----------------ASVPEGRKR---SRFL-AVGSY-DNTIRILSLDPDDCMQILSV 627
                              V +GR+    S FL AVG++ D ++R+L+L     +    +
Sbjct: 89  HPLIPGPVPGEDGAEEAMQVEDGREEAPPSAFLVAVGTWTDLSVRLLALPSLQSLHRCEL 148

Query: 628 QSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVL--FRTVVDMVTGQLSDSR 685
            S  +   S+L + +QA +            +L  GL +G L  F   ++  T  L   +
Sbjct: 149 GS-DTQARSVLLITLQADIH-----------YLLVGLGDGFLVSFAVALEGKTPALGPRK 196

Query: 686 SRFLGLRPPKL--FSVVVGGRAAMLCLSSRPWLGYIHRG-RFLLTPLSYETLEYAASFSS 742
              LG +P  L  FS         +C S RP + ++ +  + L + ++   +   A F S
Sbjct: 197 KVSLGTQPLSLTPFSSTAAEPCVFVC-SERPTVIHVSKADKLLYSNVNTSEVTLMAPFHS 255

Query: 743 DQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGAL 802
               + +   +   LR+ T++ + +   +T +PL  +PRR    P+  ++ +       L
Sbjct: 256 ALFPDCLALASETGLRIGTVDDIQKLRIQT-VPLGESPRRIAHIPQAGVLAV-------L 307

Query: 803 TAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCI 862
           TA+           A G            ENG++E  Y                     +
Sbjct: 308 TAK----------YAVG------------ENGEEETNY---------------------V 324

Query: 863 RVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQ 910
           R LD  S       EL+  E A S+    F  K+    L VGT   L+
Sbjct: 325 RFLDDASFEAVGAFELRPMELACSVAACTFA-KDPREYLVVGTCMALE 371


>gi|156049323|ref|XP_001590628.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980]
 gi|154692767|gb|EDN92505.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1153

 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 169/845 (20%), Positives = 315/845 (37%), Gaps = 131/845 (15%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +P+ +   +  N    +   +V+A+   LE+ +    G +    S  I+G I  
Sbjct: 3   YLAPVHRPSSVRLTLRLNLLDHREECLVLAKANRLEIWKATEEG-LTMAYSKSIYGRISM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK------IHQETFGKSGCRRIVPG 117
           L + +  GS+ D++ VG+   +   + +NP+ +  D       I QE    S  R     
Sbjct: 62  LQKIQPAGSKTDHLFVGTVRAQYFTVMWNPNTHKLDTMQSFVDISQEHMRDSESR----- 116

Query: 118 QYLAVDPKGRAVMIGACEK-QKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
               VDP GR +++   E    LV ++         +  P +   S   V +   +    
Sbjct: 117 DRCLVDPTGRLLVMELYEGVLNLVKIVKPRGGKTDYLEKPEQVRISEMKVRASAFLYTHT 176

Query: 177 DNPIFAAIELDYSEADQDSTGQAASE-AQKNLTFYELDLGLNHVSRKWSEPVDN---GAN 232
             P  A +  D  E    +T +   +    NL F           +     +D+   GA 
Sbjct: 177 KQPKLALLYQDARENVNLATYRMLDDKGHPNLQF--------DPKKNRENDLDDLCVGAM 228

Query: 233 MLVTVPGGGDGPS----------------GVLVCAENFVIYKNQGHPDVRAVIPRRADLP 276
            ++ VP G D  S                GV+V  E    Y +    + +A++    D  
Sbjct: 229 HIIPVPKGEDEGSKRYIVRNATTAKANLGGVVVLGETKFTYLDD---ESKAIVEYALD-- 283

Query: 277 AERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMC 336
               VL  +      +    +LL  +YG ++  T+  D   V+ +K+     +    S+ 
Sbjct: 284 --EAVLWAAWEPIDDRN---YLLGDDYGFLYLFTILVDGATVTGMKVLKLGQVSKPTSLE 338

Query: 337 VLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI 396
            L +G  + AS   ++     Q I  D      S T+++      P+             
Sbjct: 339 NLGNGVFYVASHEADN-----QVIQIDLGSPNYSVTVLQVLPNIAPILD----------- 382

Query: 397 EQVESLMPIMDM------RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAV-SQ 449
                   IMDM         N +     ++ T  G     SLR +R G+ + ++A+ ++
Sbjct: 383 ------FTIMDMGGREGQTQLNEYSSGQARLVTGSGGFEGGSLRSVRSGVGLDDIAILAE 436

Query: 450 LPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL---SIGETVEEVSDSGFLDTTPSLAV 506
           + G+   V+ +    +   D  +VVSF+  T      S+G+  E  + S     + +L  
Sbjct: 437 MEGI-HKVFALHSGPSLPNDT-LVVSFSTETRFFKFDSLGDIEEVNTISNLSAASETLLT 494

Query: 507 SLIGDDSLMQV--HPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYF 564
             + +  ++QV  H   I H +  G  + W+ P  + I     N+  ++++ +G  L+  
Sbjct: 495 YNLDNGCILQVTQHEVAI-HGKSPG--HRWQPPDGQIITAASGNQNYILLSSNGRTLVTL 551

Query: 565 EVDMTGQLLEVEKHEMSGD-VACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQ 623
            ++    L EV   E+  D VAC+ +  +           +G     I ++ L     + 
Sbjct: 552 SIEQ--NLAEVAFQELGDDQVACIHVPQL-----------LGD----IGVIGLWKSGSIS 594

Query: 624 ILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLN-------------AGLQNGVLF 670
           +L ++++ +         V   +   DGA  P  + L                +++G++ 
Sbjct: 595 LLDLKTLKTI--------VSEDLRRNDGASIPRDIALTQILLPELSGPTLFVSMEDGIVL 646

Query: 671 RTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA-AMLCLSSRPWLGYIHRGRFLLTPL 729
              VD     LS  +S  LG +  +L  +        +      P L Y   GR + + +
Sbjct: 647 SFDVDSENCSLSGRKSIVLGTQQARLQILPRDNTTFNVFATCEHPSLIYGSEGRTVYSAV 706

Query: 730 SYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKK 789
           + E      SF+S    + VV    N L++  I+    T   T LP+  T RR     K+
Sbjct: 707 TAEDAITVCSFNSRAYPDSVVVATTNELKLSAIDNERRTHVRT-LPIGETVRRIAYSAKE 765

Query: 790 KLMVI 794
           +   I
Sbjct: 766 RAFAI 770


>gi|168021793|ref|XP_001763425.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685218|gb|EDQ71614.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1452

 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 108/468 (23%), Positives = 188/468 (40%), Gaps = 86/468 (18%)

Query: 774  LPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN 833
            +PLR TP +        L  +I +     T   R  ++        MG+ G+    Q EN
Sbjct: 1031 IPLRGTPHQITYHSDVNLYALIIS-----TPVSRPTSQ------VLMGD-GHPFDQQQEN 1078

Query: 834  GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS------ANTTCLLELQDNEAAFSI 887
               E+    ++ E Y             +R+++P        A     + L +N     I
Sbjct: 1079 SIGEDGQRLVTSEDYE------------VRIIEPAQPGGNWEAKAAIKMHLTENALTVRI 1126

Query: 888  CTV-NFHDKEHGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEE-GKSLELLHKTQVE 943
             ++ N    +  TLLA+GT+  +G     K  I+   + + +  ++ G     ++  +++
Sbjct: 1127 VSIKNITTDQTQTLLAIGTSYVQGEDVAAKGRII--LVSVGKDPQDPGSWAREVYSKELK 1184

Query: 944  GIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLF---PNTIVSINTYRDRIYVG 1000
            G   A+   QG LL  IGP + L+      L        F   P  +VS+N  ++ I  G
Sbjct: 1185 GSISAIASLQGHLLIAIGPKIILHSWNGSEL----NGAAFFDAPLYVVSLNIVKNFILFG 1240

Query: 1001 DIQESFHFCKYRRDENQLYIFADD--SVPRWLTAAHHIDFDTMA--GADKFGNI-YFVRL 1055
            DI +S +F  ++ D  QL + A D  S+  + T    ID  T++   +D   N+  F   
Sbjct: 1241 DIHKSIYFLCWKEDGAQLTLLAKDFGSLDCYAT-EFLIDGSTLSLLVSDSRKNLQIFSYA 1299

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLV--PGGGES 1113
            P+ +              W+  KL           +FH+G  V    +  ++  PG   S
Sbjct: 1300 PKSME------------SWKGQKLLSR-------AEFHLGAHVNKFHRLQMLPTPGSARS 1340

Query: 1114 VIYGTVMGSL-GAMLAFSSRDDVDFFSHLEMHMRQEHPPLC-----GRDHMAYR------ 1161
              Y  + G+L GA+   +  D++ F     +H  Q     C     G +  A+R      
Sbjct: 1341 NRYAVLFGTLDGAIDYLAPLDELTF---RRLHTLQRKLVDCVSHVAGVNPRAFRQFRCDG 1397

Query: 1162 SAYFPVKD-VIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
             A+ P  D ++D +L   +  L LD Q +IA ++  T   +L  L ++
Sbjct: 1398 KAHRPGPDNIVDCELLSHYDMLPLDEQLEIARQIGTTRAHVLSNLRDL 1445



 Score = 47.8 bits (112), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 76/367 (20%), Positives = 137/367 (37%), Gaps = 68/367 (18%)

Query: 218 HVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP-----DVRAVIPR- 271
           H+    + P D    + V  P GG     VLV   N + Y +Q        +  AV P  
Sbjct: 313 HIWSATNLPYDAYKLLAVPAPIGG-----VLVFCANSLHYHSQSGSCALGLNEFAVAPEG 367

Query: 272 RADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPV 331
            A+ P  +  + +  A          L+ T+ G +  + L ++   V  L++       +
Sbjct: 368 SAEYPRSKMSVELDCAHATWVANEVALISTKNGMLLFLNLVYEGRSVQRLELTKSKASVL 427

Query: 332 TASMCVLKSGYLFAASEFGNHALYQFQAIGADP-------DVEASSSTLMETEEGFQP-- 382
           T+ MC +   + F  S   +  L Q     A         D+EA  S         +P  
Sbjct: 428 TSCMCTIGENFFFLGSRLADSLLVQHTLGSASGRTSSLMGDIEADLSAPAAKRLKREPSE 487

Query: 383 -----------VFF---------QPRGLKNLVRIEQVESLMPIMDM----------RIAN 412
                      +++         Q +     VR + + ++ P+ D               
Sbjct: 488 EEEGVSAEEMSLYYSTPTASDISQKKTFTFTVR-DSLVNICPLRDFAYGLRSNADQSATG 546

Query: 413 LFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVN------- 465
           L ++   ++    G G   SL +L   +    +    LPG  S +WTV    +       
Sbjct: 547 LGKQSNYELVACSGHGKNGSLSVLHQSIRPDLINKVALPGC-SGIWTVYHKTDRDDSNEF 605

Query: 466 -------DEFDAYIVVSFNNATLVLSIGETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQ 516
                  DEF AY+++S  + T+VL  G+T+ EV+++   + +     A +L G   ++Q
Sbjct: 606 DFGTSEDDEFHAYLIISLESRTMVLETGDTLGEVTENVEYYTEGNTIAAGNLFGRRFVVQ 665

Query: 517 VHPSGIR 523
           V+ +G+R
Sbjct: 666 VYQNGLR 672


>gi|322700871|gb|EFY92623.1| DNA damage-binding protein 1 [Metarhizium acridum CQMa 102]
          Length = 1121

 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 159/790 (20%), Positives = 293/790 (37%), Gaps = 125/790 (15%)

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ--ETFGKSGCRRIVPGQYLA 121
           L + +   S+ D + +G+D      + +N   N  D + Q  E   +   R         
Sbjct: 2   LQRLQPKDSETDLLFIGTDRLNYFNVAWNSETNQLDTVEQTIEDVAEQYMRHSQSQNKCL 61

Query: 122 VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA----------HKSHTIVYSICG 171
           VDP G+ + +   E    V+ L      R  I++ L A           K+ T ++S  G
Sbjct: 62  VDPTGKFMAMHLWEGVLNVFRL----PMRKGITTKLVALDQVRLTELWMKASTFLHSQTG 117

Query: 172 IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPV-DNG 230
                 +P  A   L  ++ DQ+    A     K+     +     H  R+  + + D  
Sbjct: 118 ------HPKIAF--LYKTQTDQEEARIAVYRLTKDDNRGNVASFDPHRERELDQVISDPY 169

Query: 231 ANMLVTVP-------------GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPA 277
           A+ML+ VP             G      G+LV  E  + Y +       ++   R     
Sbjct: 170 ASMLIPVPFREEKRYHVRNNEGAKAHLGGLLVVGETLITYFD-------SLTYSRVSSTL 222

Query: 278 ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSEL-------KIKYFDTIP 330
           +   + V+   +       +LL  +YG +  +T+E   E    +        +++ D+  
Sbjct: 223 QDPKIYVAWTEYDD---VHYLLADDYGRLDILTVETTTESTGIVVTGMAVSPMRFPDSSA 279

Query: 331 VTA---SMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQP 387
            T+   S+  +    LF AS  G+  L +        D++A    L++T     P+    
Sbjct: 280 YTSRASSLVYMGDDMLFLASHHGDSQLLRI-------DIDAQVMVLVKTLSNNAPILD-- 330

Query: 388 RGLKNLVRIEQVESLMPIMDM-------RIANLFEEEAPQIFTLCGRGPRSSLRILRPGL 440
                            IMDM       +  N F     +I   CG     SLR +R G+
Sbjct: 331 ---------------FAIMDMGNREGDSQFGNAFSSGQARIVAGCGAYHDGSLRSIRSGV 375

Query: 441 AVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL--SIGETVEEVSDSGF- 497
            + +  +         ++T++ + +   D  +V S  +  ++   S G+  E  +  G  
Sbjct: 376 GLEDQGILDEIQDTKGLFTLRSHESSHVDTLVVSSVADTRVLRFDSAGDIEEVYAFQGLT 435

Query: 498 LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN--EWRTPGKRTIVKVGSNRLQVVIA 555
           LD    LAV+ I D  L+QV P     +  +  +N   W  P  + I    +N+   +++
Sbjct: 436 LDMETLLAVN-ISDGRLLQVTPKSAVLLDSESGVNLCSWDAPSGKAITAASANKGWALLS 494

Query: 556 LSGGELIYFEV--DMTGQLLEVEKHEMSG---DVACLDIASVPEGRKRSRFLAVGSYDN- 609
           + G  L+   +  ++   L +    E SG    ++CL  A     R       VG + + 
Sbjct: 495 IDGSSLVSLNLHDNLAAVLRDTSGDESSGQPDQISCLHAA-----RDSPDIGVVGWWTSG 549

Query: 610 TIRIL---SLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL---FLNAG 663
           TI I+   +L P     +   +  +S P  +  +++           HP  +    L   
Sbjct: 550 TISIVDLATLQPLHGEPLRQTEDSASVPRDIALVQL-----------HPPQVSGPTLLIA 598

Query: 664 LQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGYIHRG 722
           L++G +    + M    +S  +S  LG  P +L  +    G   +   +    L Y   G
Sbjct: 599 LEDGNVVTFDMSMQGYTISGRKSVTLGSSPARLHVLPQEDGTCNVFATTEHASLIYSAEG 658

Query: 723 RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRR 782
           R + +  + +   Y A F S+     +V    + +R+  I++   T  +T L ++ T RR
Sbjct: 659 RIIYSATTADDATYVAPFDSEAFPNSIVLSTDSHIRLSHIDKERLTHVKT-LSVKETVRR 717

Query: 783 FVLQPKKKLM 792
               P  K+ 
Sbjct: 718 VAYSPTLKVF 727


>gi|428182571|gb|EKX51431.1| hypothetical protein GUITHDRAFT_134365 [Guillardia theta CCMP2712]
          Length = 1295

 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 147/683 (21%), Positives = 260/683 (38%), Gaps = 125/683 (18%)

Query: 421  IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD-AYIVVSFNNA 479
            +    G G  +S+R LR GL V     S+       V         + D +++ ++F   
Sbjct: 486  VLVCSGTGKHASIRRLRYGLPVETHVRSEKGLCDGIVGLYTITFEQKHDQSFLFMAFTTG 545

Query: 480  TLVLSIGETVEEVSDS-GFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRE----------- 527
              VL++G  + +V+D  G   T  +L  +   D  L+QV    +  I++           
Sbjct: 546  CRVLTVGSELSDVTDDLGLNPTALTLHAAANSDGHLIQVSDEEVIVIQQPVLDSMDLDVI 605

Query: 528  ---DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMT------GQLL---EV 575
                     WR P + T + V ++   +V+  + G      +D T      G+     E+
Sbjct: 606  PCSQPERAVWR-PAESTKISVSASLGNLVMCCTCGGTSIHILDTTRDQGSAGEFQIRGEI 664

Query: 576  EKHEMSGDVACLDIASV-PEGRKRSRFLAVGSYDNT-------IRILSLDPDDCMQILSV 627
                 S +V+C+ + S+   G +  +   +G+Y +        I+I SL  +   ++   
Sbjct: 665  TSFRSSEEVSCMAMTSLGAHGSETRKISIIGTYADALKARAGKIKIYSLGEEK-REVELA 723

Query: 628  QSV-----------SSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNG-VLFRTVVD 675
            QS+            S P+S   L   A  GG         +FL  GL+NG V+  T+  
Sbjct: 724  QSIDLGIYSGSDLSGSVPQSFGILPEPA--GG---------VFLVVGLRNGKVIIFTLNA 772

Query: 676  MVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTP----LSY 731
            +    +    +R L   P    S+      +++ L        +    FL+TP    L +
Sbjct: 773  LSLPLVGLGTTRRLAESPITFVSITSYAGPSLIAL--------VEDVAFLVTPSRASLQF 824

Query: 732  ETL-------EYAASFSSDQCVEGVVSVAGNALRVFTIERLGE--------------TFN 770
            + +        +AA F  D C  G+  V    L++ +I+R  +              T +
Sbjct: 825  QRIGFQPGGISHAAPFICDACPLGMAIVVDGQLKLVSIDRCEKLDVKTIPLALESEHTES 884

Query: 771  ETALPLRYTPRRFVLQPKKKLMVI-IETDQGALTAEEREAAKKECFEAAGMGENGNGNMD 829
            E+ L   + P R V  P  KL+++     +    AEE    K  C E   +       + 
Sbjct: 885  ESKLEDNFMPARVVWHPDAKLVIVGCNYSRKVCGAEEEPENKVMCCELRLIDHVSWSTVH 944

Query: 830  QMENGDDEN-----KYDPLSDEQY----GYPK----AESDKWVSCIRVLDPRSANTTCLL 876
                G++E       Y  L DE        P+    +++ + V    + + RSA+     
Sbjct: 945  VQHIGENERIHALALYRTLEDEVLVCVGTGPEISLVSKAQREVESTSLFEKRSAS----- 999

Query: 877  ELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGKSLEL 936
             L +NE+  S  + N  D+  G     G    L+   + + V   + I+R V++  + EL
Sbjct: 1000 -LNENESERSSDSDN-EDQGVGDESPTGNETNLKRRRRESKVNSRLLIWRIVQKSGAPEL 1057

Query: 937  LHKTQV--EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRK---CEN----KLFPNT- 986
            +    +       A+CQ+Q  L    G    LY+  + RL +K   C      +L   T 
Sbjct: 1058 VLVASISTRNACRAICQYQSCLAVATGETWTLYEFSRVRLEKKERSCNKTRFRRLLSKTA 1117

Query: 987  ---IVSINTYRDRIYVGDIQESF 1006
               I S+ +    + VGD  +SF
Sbjct: 1118 RFLITSLTSNGFHLAVGDCVDSF 1140


>gi|346970653|gb|EGY14105.1| hypothetical protein VDAG_00787 [Verticillium dahliae VdLs.17]
          Length = 1160

 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 125/600 (20%), Positives = 229/600 (38%), Gaps = 69/600 (11%)

Query: 246 GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGD 305
           G++V  E  +IY +      +  I +  D P     + VS A +    +  +LL  +YG+
Sbjct: 258 GLIVAGETMLIYVDTL---TKVKISKALDEPR----IFVSWAKY---DVTRYLLADDYGN 307

Query: 306 IFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPD 365
           +  +TLE D   V+ L +K        + +  + +  LF  S  G+  L+         D
Sbjct: 308 LHLLTLEVDGVIVTGLSLKTIGKTSRASCLVYMGNEILFLGSHHGDSQLFTL-------D 360

Query: 366 VEASSSTLMETEEGFQPVF-FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTL 424
           + A +  L++T     P+  F    L N              D  + N F     +I   
Sbjct: 361 LCAHTIRLIQTIPNIAPILDFSIMDLGN------------AGDSGVGNAFSSGQARIVAG 408

Query: 425 CGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLS 484
           CG     SLR +R  + + ++ +         ++++K   +++ D  +VVSF   T V  
Sbjct: 409 CGVHHNGSLRSIRSSVGLEDIGILDDIQDVRGLFSLKSYGSEKVDT-LVVSFLTETRVFK 467

Query: 485 I---GETVEEVSDSGFLDTTPSL-AVSLIGDDSLMQVHPSGIRHIREDG-RINEWRTPGK 539
               G   E  +  G     P+L A SL    +L     S +    E G  IN W +P  
Sbjct: 468 FDADGGVEELTAFQGLTLDQPTLFAGSLANGHTLQITASSALLQDSESGVTINSWTSPNG 527

Query: 540 RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVA--CLDIASVPEGRK 597
            +IV    N    ++++ G  L+   +    Q  +V +  +   +      I+ +   R 
Sbjct: 528 GSIVNASVNEKYALLSVGGSTLVSLNLT---QNFDVREQALGNGIGGDGSQISCIHASRD 584

Query: 598 RSRFLAVGSYDN-TIRILSLDPDDCMQILSVQSVS------SPPESLLFLEVQASVGGED 650
                A+G +   ++ +++L     +Q L  +S+       S P  L F+++        
Sbjct: 585 FPDIGAIGFWSTGSVSVINL---GTLQALHGESIKQNDDNVSVPRDLAFVQL-------- 633

Query: 651 GADHPASL---FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVV---VGGR 704
              HP  L    L   L++G +    V      L+  +S  LG R   L  +      G+
Sbjct: 634 ---HPPQLAGPTLFVSLEDGQVVSINVSKDDYSLTARKSVTLGSREAGLHVLPRPGAPGQ 690

Query: 705 AAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIER 764
           + +   +    L Y   GR + +  + E + Y A F S+   + +       +R+  ++ 
Sbjct: 691 SNVFATTEHSSLIYSSEGRIIYSAATAEDVTYIAPFDSEGFPDAIFLATDKNVRIANVDT 750

Query: 765 LGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENG 824
              T +   L +  T RR    P  K   I    +  L  EE  ++  +  +   +G+ G
Sbjct: 751 ERRT-HVNPLHIGETVRRVAYSPALKAFGIGTIRKELLHDEEVVSSAFQLVDEIVLGKVG 809


>gi|413955485|gb|AFW88134.1| hypothetical protein ZEAMMB73_187104 [Zea mays]
          Length = 275

 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 32/38 (84%)

Query: 1161 RSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTP 1198
            RS+    +DVIDGDLCEQ+P+L  D+QRKIADELDRTP
Sbjct: 200  RSSRKQQEDVIDGDLCEQYPSLPADMQRKIADELDRTP 237


>gi|342318986|gb|EGU10938.1| DNA damage-binding protein 1b [Rhodotorula glutinis ATCC 204091]
          Length = 1102

 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 192/885 (21%), Positives = 345/885 (38%), Gaps = 150/885 (16%)

Query: 49  IETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPS-----KNVFDKIHQ 103
           +  L+   +F  I S+   + T S    +VV +   R+  L ++P+     K V      
Sbjct: 47  VNPLLEVPLFSTIASMQSGQATAS----LVVLTTCLRLFALVHDPTSPYNVKTVASVSIA 102

Query: 104 ETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVL-----------NRDTAARLT 152
           E FG     R+   Q + VDP  R +++ A     LV V+              TA RL 
Sbjct: 103 EPFG-----RLAEYQDILVDPANRCLLVHA--YAGLVRVVPFFIGDTPAQRGSRTATRLA 155

Query: 153 IS---SPLEAHKSHTIVYSICGI-------DCGFDNPIFAAIELDYSEADQDSTGQAASE 202
            S   SPL+   S+ +   I  +           D PI A I ++++     ST      
Sbjct: 156 GSPHGSPLDFSYSYNVRLPILNVASLAIVASSADDPPILAGIHIEHTGTRTLSTFA---- 211

Query: 203 AQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIY----- 257
               ++  + DL    V+       D G+ +++ V    + P G+LV  E  V +     
Sbjct: 212 ----ISLKDKDLCEGPVAAF--ALADPGSELVLPV-NEANAP-GILVAGEETVTWVSLEE 263

Query: 258 ---------KNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFK 308
                    K +G    + ++  R  LP  R    ++A + R       LL   YG +F+
Sbjct: 264 RNGASSTASKGKGRAASQMLVSCR--LPVAR----ITAWSWRNNDRL--LLGDIYGKLFE 315

Query: 309 VTLEH-DNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVE 367
           V L   +N  VS +  +        +++  L +  ++ AS FG+  + +F + G D    
Sbjct: 316 VNLRRAENGVVSGISAQDVGDAASASAIVPLGATTVYLASRFGDSQIVRFVS-GED---- 370

Query: 368 ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGR 427
                     EG         G   L  ++ + ++ PI+D+ I +   + A    T  G 
Sbjct: 371 ----------EGMA-------GPAELALVDSISNIAPIVDLCIVSAHGQAANYAVTCSGA 413

Query: 428 GPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLV--LSI 485
               SLR++R G+ +SE+A  +  GV  A W++        +  +V+ F + T V  +S 
Sbjct: 414 YKTGSLRVIRRGVGLSELAALEADGVQQA-WSLTSPAPST-EPILVLGFFSETRVFRMSA 471

Query: 486 GE-------TVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPG 538
           G+        ++E+    F    P++    +G   L++V    + +  + G  +   T  
Sbjct: 472 GDPAGAEAVQIDEMDLQLFASPGPTIFAGNVG-SMLVRVTAEAVMYASDRGEESWKATSA 530

Query: 539 KRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKR 598
            +      +    +V+A  GG L   +    G   E        D+A + +A    G   
Sbjct: 531 GKITAAAAAGGDHLVLAFDGGFLQLLKAK-NGTFTESGNIAFEHDIASVSLAETSAG--- 586

Query: 599 SRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL 658
             F  VG + +    L   PD  + + + Q ++S      FL   A++      D+  +L
Sbjct: 587 -AFAVVGLWTSQAVHLVGIPD--LAVYASQKITST-----FLIRSAALINFGDGDY--TL 636

Query: 659 FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGL-RPPKLFSVVVGGRAA--MLCLSSRPW 715
           F+  GL +G L    VD+    + DS  + + L R P L S  +G  +A  +L +S RP 
Sbjct: 637 FV--GLGDGTLASYRVDLAAPAVIDSTGKMIALGRRPLLLS-EIGPESAKVLLAVSDRPT 693

Query: 716 LGYIHRGRFLLTPLSYET-LEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETAL 774
           +    R R     L+Y + +   A+ S     + V  V+   +++  ++ + +    T  
Sbjct: 694 VISKARDR-----LNYSSGVSSVANISHPALGDLVALVSREGVQIGRMDTVQKVDVRTVP 748

Query: 775 PLRYTPRRFVLQPKKKLMVII--------ETDQGALTAEEREAAKKECFEAAGMGENGNG 826
                PRR V  P  +   +          T Q A+T+  R    ++ FE + + E    
Sbjct: 749 LAEDEPRRIVYDPVSRKFCVACSRRDIDRHTGQQAVTSVVR-LVSEDSFETSSVFE---- 803

Query: 827 NMDQMENGDDENKYDPL-SDEQYGYPKAESDKWVSCIRVLDPRSA 870
               +E G++      + S     +  +   K  +C++   P SA
Sbjct: 804 ----LERGEEAQSLALVESQGTVAWSSSPFQKLETCVKFRAPVSA 844



 Score = 44.3 bits (103), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 51/243 (20%)

Query: 995  DRIYVGDIQESFHFCKYRRD-ENQLYIFADDSVPRWLTAAHHIDFDTMAGADKF------ 1047
            D + VGD   S    +Y    + +L   A D   R++     +  D+  GAD++      
Sbjct: 878  DTLIVGDALRSLTVLRYTASPQPKLLEVAKDYRSRYMVGVEDLGRDST-GADRYIGAETD 936

Query: 1048 GNIYFV-RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL 1106
             N++ V R PQ  +  +    T                 +++   FH+G++VT  +  SL
Sbjct: 937  LNLFAVSRHPQQAAGNLANAAT-----------------LQDAGAFHLGELVTRFRTGSL 979

Query: 1107 VPGGGES-------VIYGTVMGSLGAML---AFSSRDDVDFFSHLEMHMRQEHPPLCGRD 1156
                G++       ++Y T  G++G +    A SSR      S LE +MR+    + G +
Sbjct: 980  GDLIGDANTTVVPRLVYSTSAGTIGVIADLDAASSR----ILSDLERNMREFVKGVGGLE 1035

Query: 1157 HMAYRSAY-----FPVKDVIDGDLCEQFPTLSLDLQRKIA------DELDRTPGEILKKL 1205
                 +        P    IDGD  + F  LS D+Q ++       + L     EI++ L
Sbjct: 1036 QEELVAGVADKVKTPSTGFIDGDFVQSFLDLSKDVQEQVMQGKSEHERLTVDKAEIVRLL 1095

Query: 1206 EEI 1208
            EE+
Sbjct: 1096 EEV 1098


>gi|384487281|gb|EIE79461.1| hypothetical protein RO3G_04166 [Rhizopus delemar RA 99-880]
          Length = 1468

 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 162/374 (43%), Gaps = 72/374 (19%)

Query: 245 SGVLVCAENFVIYKNQGHPD----VRAVIPRRADLPA---ERGVLIVSAATHRQKTLFF- 296
           +G+LV A N +++ +QG P     V     +  D P    E  ++ +  +    K L F 
Sbjct: 315 TGMLVIAANSILHVSQGSPGMGVAVNGYTKKTTDFPGMIYEPSLIELGLSLEGAKALAFG 374

Query: 297 -----FLLQTEYGDIFKV-------------TLEHDNEHVSELKIKYFDTIPVTASM--C 336
                  +Q  +  + +V              ++HD   V E K   FDT P+ AS+  C
Sbjct: 375 GDRCLIFMQNGHWALVEVRRDGNKVVGMAISEIKHDLP-VMEKKPPRFDTPPLLASVPSC 433

Query: 337 V--LKSG-YLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNL 393
           V  +K+G Y F  S  G+  L ++ A   +    A             PVF     + N 
Sbjct: 434 VTNVKAGEYFFLGSRVGDSLLIKYDANRVNHQSVAP------------PVFRVCDTMLNT 481

Query: 394 VRIEQVESLMPIMDMRIANL----FEEEAPQI--FTLCGRGPRSSLRIL-RPGLAVSEMA 446
                     PI+DM + ++     +E+ PQ+   +  G G   +L +  R     +  A
Sbjct: 482 ---------GPIVDMAVGDVDTVEQQEDWPQLELVSSSGHGKNGALCVFQRHIYPQTSFA 532

Query: 447 VSQLPGVPSAVWTVK-------KNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLD 499
             Q      A+W++K       +N +D+FD  + +S + +TLVLS G+ ++EV  +GF  
Sbjct: 533 FHQFDS--QAIWSIKCRKNDQQQNEDDDFDKLLFISKSKSTLVLSAGDELQEVK-TGFYT 589

Query: 500 TTPSLAVSLIGDDS-LMQVHPSGIRHIREDG-RINEWRTPGKRTIVKVGSNRLQVVIALS 557
              ++AVS + D + ++QV+ +G+  +  +G RI     P    IV+   +   +++ L 
Sbjct: 590 RGSTIAVSTLFDATRIVQVYATGVMVLTPEGKRIQTVPIPRGAKIVEASIHDPYILLTLD 649

Query: 558 GGELIYFEVDMTGQ 571
             +++  + D + +
Sbjct: 650 NNKILALQGDASTK 663


>gi|350629921|gb|EHA18294.1| damage-specific DNA binding protein [Aspergillus niger ATCC 1015]
          Length = 1140

 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 168/845 (19%), Positives = 307/845 (36%), Gaps = 141/845 (16%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFGAI 61
           Y + + + + I  A+  +F   +   +VVA+   LE+  L PE    +    S  +F  +
Sbjct: 3   YVVPIHRASSIRNALKLHFMNAEEETLVVAKANRLEIYSLTPEG---LNLAASCSLFAKV 59

Query: 62  RSLAQFRL-TGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET----FGKSGCRRIVP 116
             LA+      S  D++ VG+D      L ++  +N   +I  E           R    
Sbjct: 60  TMLARLPAPANSPTDHLFVGTDRYTYCTLSWDGERN---QIRTERNYVDISDPSSREAQT 116

Query: 117 GQYLAVDPKGRAVMI----GACEKQKLVYVLNRDTAARLT------------ISSPLEAH 160
           G    +DP GR + +    G      +V + ++    ++             +  P  A 
Sbjct: 117 GNRCLIDPSGRFMTLEVYEGVIAVVPIVQLPSKKRGRQVAPPSGPDAPRVGELGEPTTAR 176

Query: 161 KSHTIVYSICGIDCGFDNPIFAAI-------------ELDYSEADQDSTGQAASEAQKNL 207
                V S   +      P  A +              L YS A   +   AA E   + 
Sbjct: 177 IDELFVRSSAFLHVQSGPPRLALLYEDNQKKVRLKVRALHYSAATASTGADAAFEESLDG 236

Query: 208 TFYELDLGLNHVSRKWSEPVDNGANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVR 266
              ELDLG +H               L+ VP     P  G+LV  E  + Y +    D  
Sbjct: 237 FSQELDLGASH---------------LIPVPA----PLGGLLVLGETSIKYVDT---DSN 274

Query: 267 AVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHD-NEHVSELKIKY 325
            ++ R  D   E  + +       Q+    +LL  +YG +F + L  D N  V   K+ +
Sbjct: 275 EIVSRPLD---EATIFVAWEQVDSQR----WLLADDYGRLFFLMLVLDSNNQVQSWKLDH 327

Query: 326 FDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFF 385
                  + +  L  G +F  S  G+  + +                             
Sbjct: 328 LGNTARASVLIYLGGGVIFVGSHQGDSQVLRI---------------------------- 359

Query: 386 QPRGLKNLVRIEQVESLMPIMDMRIANL-----------FEEEAPQIFTLCGRGPRSSLR 434
              G  +L  I+ + ++ PI+D  I +L           F     +I T  G     +LR
Sbjct: 360 ---GNGSLEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLR 416

Query: 435 ILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEE 491
            +R G+ + E+ V     + + ++ ++      +   ++V+F + T V      GE  E 
Sbjct: 417 SVRSGVGMEELGVLGEMELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEEL 476

Query: 492 VSDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRI-NEWRTPGKRTIVKVGSNR 549
            S  G  L     LA++L G   L       +    E G + NEW  P    I    +N 
Sbjct: 477 DSFLGLSLSENTLLAMNLPGGRILQVTEQRVLIADIEGGMVTNEWTPPDNLVITSASANN 536

Query: 550 LQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDN 609
             +V+ +SGG+L+   +D+   +  + + +   D + +   +VP     S  + +  +  
Sbjct: 537 DSIVL-VSGGQLMTV-LDINNDVRVISQKDFGAD-SQISGVTVP---LSSAGVCIVGFPQ 590

Query: 610 TIRILSLDPDDCMQILSVQ---SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQN 666
             ++  LD     ++ +     +  + P S+L  +V         A+ P++LF++  + +
Sbjct: 591 LAKVSVLDLGRLSELHTTSLGPAGEAFPRSVLVADVL--------ANSPSTLFIS--MAD 640

Query: 667 GVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFL 725
           G +     D     L+      LG   P    +  G G   +      P L Y   GR +
Sbjct: 641 GSVITYSFDASNYSLTGMNRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRII 700

Query: 726 LTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVL 785
            + ++ E       F+S+     +     + L++  +++   T  +T LP+  T RR   
Sbjct: 701 YSAVNSEGASRVCHFNSEAYPGSIAVATRHDLKIALVDKERTTQIQT-LPMGETARRVAY 759

Query: 786 QPKKK 790
            P +K
Sbjct: 760 SPSEK 764



 Score = 40.4 bits (93), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 118/296 (39%), Gaps = 40/296 (13%)

Query: 918  VAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY-----DLGKK 972
            + G I ++  ++ G+ L  + +  V+G   AL     +++A +   + +Y     D G  
Sbjct: 847  IRGRILVFE-IDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKTVVIYGVVNNDFGAM 905

Query: 973  RLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN----QLYIFADDSVPR 1028
            +L  K  +       V +    + I V D+ +S    +Y   EN     L   A      
Sbjct: 906  KL-EKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEGENGMPDSLTEVARHFQTV 964

Query: 1029 WLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEE 1088
            W T    I  DT    D  GN+  +R  ++++  +EED                  ++E 
Sbjct: 965  WATGVSCIAKDTFLETDAEGNLIVLR--RNLTG-VEEDDK---------------RRLEV 1006

Query: 1089 IVQFHVGDVVTSLQKASLVPGGGESV----IYGTVMGSLGAMLAFSSRDDVDFFSHLEMH 1144
              +  +G++V  ++  ++      +V      GTV GS+  + A  + +  DF   L+  
Sbjct: 1007 TGEISLGEMVNRIRPVNIQQLASVTVTPRAFLGTVEGSI-YLFAIINPEHQDFLMRLQAT 1065

Query: 1145 MRQEHPPLCG---RDHMAYRSAYFPVKD---VIDGDLCEQFPTLSLDLQRKIADEL 1194
            M  +   L      +   +RS     K+    +DG+L E+F T    LQ +I D +
Sbjct: 1066 MAGKVESLGNIPFNEFRGFRSMVRETKEPYRFVDGELIERFLTCEPSLQEEIVDSV 1121


>gi|47208788|emb|CAF91599.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 149

 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 36/45 (80%)

Query: 1167 VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
            V++VIDGDLCEQ+ ++    Q+ +A+ELDRTP E+ KKLE+IR +
Sbjct: 102  VQNVIDGDLCEQYNSMEPHKQKSVAEELDRTPPEVSKKLEDIRTR 146


>gi|440904368|gb|ELR54893.1| Cleavage and polyadenylation specificity factor subunit 1, partial
           [Bos grunniens mutus]
          Length = 1417

 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 119/578 (20%), Positives = 218/578 (37%), Gaps = 118/578 (20%)

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
           E+  ++E + S   FG + S+A  +L G+++D +++        ++EY+P  +    +  
Sbjct: 61  EHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLS-------VVEYDPGTHDLKTLSL 113

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 114 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEG 173

Query: 160 HKSHTIVYSICGI-----------DCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I  +           D  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 174 QRSSFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 232

Query: 209 FYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        WS    P D    + V  P GG     V++ A N ++Y NQ  P
Sbjct: 233 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGG-----VVIFAVNSLLYLNQSVP 287

Query: 264 DVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE 316
                +           L  + GV I +  A     +    ++  + G+I+ +TL  D  
Sbjct: 288 PYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG- 346

Query: 317 HVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTL 373
            +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +ST 
Sbjct: 347 -MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PASTA 401

Query: 374 METEEGFQPVFFQPR--------GLKNLVR-----------------------IEQVESL 402
            E  +  +P   + R        G K++ +                        E  +S+
Sbjct: 402 REAADKEEPPSKKKRVDATTGWSGSKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSI 461

Query: 403 MPIMDMRIANLFE--------EEAPQ----IFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
           + I     A + E        + +P+    I    G G   +L +L+  +    +   +L
Sbjct: 462 LNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFEL 521

Query: 451 PGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIG 486
           PG    +WTV   V  E +                         ++++S  ++T++L  G
Sbjct: 522 PGC-YDMWTVIAPVRKEQEETLKGEGTEPEPGAPEAEDDGRRHGFLILSREDSTMILQTG 580

Query: 487 ETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           + + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 581 QEIMELDASGFATQGPTVFAGNIGDNRYIVQVSPLGIR 618



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 107/541 (19%), Positives = 200/541 (36%), Gaps = 83/541 (15%)

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYE-TLEYAASFSSDQCVEGVVSVA 753
            + F  + G     +C  S  WL    RG   L P+  +  ++  A F +  C  G +   
Sbjct: 923  RYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMGIDGPIDSFAPFHNINCPRGFLYFN 982

Query: 754  GNA-LRVFTIE---RLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREA 809
                LR+  +         +    +PLR T        + K+  +  +     T   R  
Sbjct: 983  RQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVESKVYAVATSTSTPCTRVPRMT 1042

Query: 810  AKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS 869
             +++ FE                            DE+Y +P+ E+     CI+++ P S
Sbjct: 1043 GEEKEFETIE------------------------RDERYVHPQQEA----FCIQLISPVS 1074

Query: 870  --ANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYR 926
              A     +EL++ E    + TV+   +E  + L    A G        +   G I I  
Sbjct: 1075 WEAIPNARIELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIMD 1134

Query: 927  FV----EEGKSL-----ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL--L 975
             +    E G+ L     ++L++ + +G   ALC   G L++ IG  + L+ L    L  +
Sbjct: 1135 VIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELTGM 1194

Query: 976  RKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH 1035
               + +L+ + ++S+  +   I   D+ +S    +Y+ +   L + + D+ P      + 
Sbjct: 1195 AFIDTQLYIHQMISVKNF---ILAADVMKSISLLRYQEESKTLSLVSRDAKP---LEVYS 1248

Query: 1036 IDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVG 1095
            +DF  M    + G +        VSD          +   +    G   ++     FHVG
Sbjct: 1249 VDF--MVDNAQLGFL--------VSDRDRNLMVYMYLPEAKESFGGM--RLLRRADFHVG 1296

Query: 1096 DVVTSL------------QKASLVPGGGESVIYGTVMGSLGAMLAFSSRD--DVDFFSHL 1141
              V +              K S+V        + T+ G +G +L    +    +    + 
Sbjct: 1297 AHVNTFWRTPCRGAAEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNA 1356

Query: 1142 EMHMRQEHPPLCGRD----HMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRT 1197
               M   H  L  R     H+  R     V++V+DG+L  ++  LS   + ++A ++  T
Sbjct: 1357 LTTMLPHHAGLNPRAFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSPMERGELAKKIGTT 1416

Query: 1198 P 1198
            P
Sbjct: 1417 P 1417


>gi|393907593|gb|EJD74705.1| CPSF A subunit region family protein [Loa loa]
          Length = 990

 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 121/578 (20%), Positives = 219/578 (37%), Gaps = 83/578 (14%)

Query: 20  GNFSGTKTPEIVVARGKVLELLRPE-------------NSGRIETLVSTEIFGAIRSLAQ 66
           G F   K  +IV    K L++ R                + R+E L++  +   ++S A 
Sbjct: 20  GKFFPEKGLQIVTVGVKYLQIFRANPYALLLKDEQQWAQTTRLECLLAVRLLAPVQSFAI 79

Query: 67  FRLTGSQK-DYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG----KSGCRRIVPGQYLA 121
            R+  +   D +++G D  ++ I+  NP+      I    F     K G  + +P   + 
Sbjct: 80  ARIPQNPDCDSLLLGFDDAKLSIVGVNPADRSLKTISLHCFEDELLKDGFTKNLPRPVIR 139

Query: 122 VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYS------ICGIDCG 175
           VDP  R   +    +   V   N D+ A+L          S+T+  S      +  +D  
Sbjct: 140 VDPGQRCAAMLVFGRYLAVLPFN-DSGAQL---------HSYTVQLSQIDSRLVNVVDMV 189

Query: 176 FDNPIFAAIELDYSEADQDSTGQAASEAQKNLTF-YELDLGLNHVSRKW---SEPVDNGA 231
           F +  +    L   E  Q + G+A             L++    ++  W   + P+D   
Sbjct: 190 FLDGYYEPTLLFLYEPVQTTCGRACVRYDTMCVLGVSLNVKEQVLASVWQLTNLPMDCNQ 249

Query: 232 NMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP----DVRAVIPRRADLPA---ERGVLIV 284
            + +  P GG     +L+ A N +IY NQ  P     + + +      P    +  VL +
Sbjct: 250 ILAIPRPVGG-----ILLVATNELIYLNQSVPPCGISLNSCMDGFTKFPLRDFKHMVLTL 304

Query: 285 SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVS---ELKIKYFDTIPVTASMCVLKSG 341
                   +    LL    G +F + L  D  +     ELK ++   IP T + C    G
Sbjct: 305 DGCVVTVISTNKILLCDRNGRLFTLVLVTDATNSVKSLELKFQFKTVIPCTMTSCA--PG 362

Query: 342 YLFAASEFGN----HALYQFQAI--GADPDVEASSSTLMETEEGFQ------PVFFQPRG 389
           YLF  S   +    H +++   +   A   ++ ++      +E F+      P   +P  
Sbjct: 363 YLFIGSRLCDSVFLHCIFEQSTLDESAPKKIKLNTELNANEDEDFELYGEVLPKVAKPDS 422

Query: 390 LKNLVRIEQVESLMPIMDMR--------IANLFEEEAPQ--IFTL---CGRGPRSSLRIL 436
            + L+ I  ++ L+ +   +        I+  F+E   +  +F L   CG G   S+ I 
Sbjct: 423 AEELLNIRVLDKLLNVGPCKKITGGCPSISAYFQEVTRKDPLFDLVCACGHGKFGSICIF 482

Query: 437 RPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSG 496
           +  +    +  S + GV    W V +   D+   Y + S    TL L     + E+    
Sbjct: 483 QRSVRPEIVTSSSIEGV-VQYWAVGRR-EDDTHMYFIASKELGTLALETDNDLVELEAPI 540

Query: 497 FLDTTPSLAVSLIGDDSL-MQVHPSGIRHIREDGRINE 533
           F  + P++A   + D  L +QV  S +  + E  +I  
Sbjct: 541 FATSEPTIAAGELADGGLAVQVTTSSLVMVAEGQQIQH 578


>gi|123475983|ref|XP_001321166.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121903987|gb|EAY08943.1| hypothetical protein TVAG_485900 [Trichomonas vaginalis G3]
          Length = 1036

 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 76/149 (51%), Gaps = 10/149 (6%)

Query: 1005 SFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIE 1064
            +  F    + + Q  I A +++PR  TA   +D +++A  DKFG I  +RL  D + +I 
Sbjct: 827  AIKFITDSKTQTQKTILATEAMPRQATAIVGLDDNSVAVGDKFGGITILRLSDDFAVDIP 886

Query: 1065 ---EDPTGGKIKWEQGKLNGAP---NKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGT 1118
                  +   I++ +G+    P    +++ +  F VG++VTSL    +V    +++ Y T
Sbjct: 887  WKFATSSTALIQYSEGQKKPIPLDVGRIDRVASFMVGEMVTSL----MVSPASKTLYYTT 942

Query: 1119 VMGSLGAMLAFSSRDDVDFFSHLEMHMRQ 1147
            ++G +G ++  S+ ++ +  + +E    +
Sbjct: 943  LLGQIGVLIPISNEEEFNSLASVETQTEK 971


>gi|344236599|gb|EGV92702.1| Cleavage and polyadenylation specificity factor subunit 1
           [Cricetulus griseus]
          Length = 1419

 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 156/405 (38%), Gaps = 57/405 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------PENSG----- 47
           MY        PTG+  A+  NF       +VVA    L + R         +N G     
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNNERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFGKSGCR----RIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F +S  R    + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEESELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 353

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQF 357
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++
Sbjct: 354 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKY 396



 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 503 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEEAPRAESTEQ 561

Query: 470 --------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  +
Sbjct: 562 ESTTPKAEEDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYI 621

Query: 515 MQVHPSGIR 523
           +QV P GIR
Sbjct: 622 VQVSPLGIR 630


>gi|358400469|gb|EHK49795.1| hypothetical protein TRIATDRAFT_146031 [Trichoderma atroviride IMI
           206040]
          Length = 1161

 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 164/840 (19%), Positives = 318/840 (37%), Gaps = 117/840 (13%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +PT I  A+   F      ++VVA+   LE+ R    G +  L +  I G I  
Sbjct: 3   YVAPVHKPTSIRHALRIRFLSPDIEDLVVAKANRLEIWRVTEEG-MTCLHTKVIHGTIDM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ--ETFGKSGCRRIVPGQYLA 121
           L + +   S  D + +G+D  +   + +NP  N  D + Q  E   +   R+        
Sbjct: 62  LQRLQPKDSATDLLFIGTDRLQYFNVAWNPETNQLDAVEQAIEDTAEPYMRQSQSQNRCL 121

Query: 122 VDPKGRAVMIGACEKQKLVYVLN--RDTAARLTISSPLEA----HKSHTIVYSICGIDCG 175
           VDP G+ + +   E    V+ L   + +  RL     +       K+ T ++S  G    
Sbjct: 122 VDPTGKFMAMHLWEGVLNVFRLRIRKGSTTRLEGLDQVRLTELWMKTSTFLHSRTG---- 177

Query: 176 FDNPIFAAI---ELDYSEA-------DQDSTGQAAS--EAQKNLTFYELDLGLNHVSRKW 223
             +P  A +   +LD  EA        +D  G  +S  + QK+    ELD  +       
Sbjct: 178 --HPRIAFLYKNQLDREEARIAVYRLTEDDKGGVSSKFDPQKD---RELDQVIP------ 226

Query: 224 SEPVDNGANMLVTVP-------------GGGDGPSGVLVCAENFVIYKNQ-GHPDVRAVI 269
               D  A+ML+ VP             G      G+LV  E  + Y +   + +V + +
Sbjct: 227 ----DPYASMLIPVPVYEEKRYHVRNNEGARAHLGGLLVVGETLLTYFDSLTYSNVCSTL 282

Query: 270 PRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSEL-------K 322
               D P      I  A      T +F  L  +YG +  + ++  NE    +        
Sbjct: 283 ----DDPK-----IYVAWAECDGTRYF--LADDYGRLDLLEIKTTNESTGVVVTGMTVHP 331

Query: 323 IKYFDTIPVTA---SMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEG 379
           + + D+   T+   S+  + +  LF  S  G+  L          D+E+   TL++    
Sbjct: 332 MAFGDSSRYTSRASSLVYMGNNLLFIGSHHGDSQLLHV-------DIESQQMTLIKVISN 384

Query: 380 FQPVF-FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRP 438
             P+  F    L N              D +  N F     +I    G     SLR +R 
Sbjct: 385 NAPIMDFTIMDLGNREG-----------DAQSGNTFSSGQARIVAGSGAYQDGSLRSIRS 433

Query: 439 GLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEV-SDSGF 497
           G+ + +  +         ++T++   + + D  ++ +     ++    + +EE+ S  G 
Sbjct: 434 GVGLEDRGLLDEIEGTRGLFTLRSVDSAKADTVVISTLAGTRVLRFEPDNIEELFSFQGM 493

Query: 498 LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIA 555
              +P+L  + +    ++Q+ P  +  +  D    ++ W+ P  +TI    +N    +++
Sbjct: 494 DLESPTLLAANLPSGQILQITPQAVNLLDPDSGVSVSSWQAPEGKTITAASANTKWALLS 553

Query: 556 LSGGELIYFEV--DMTGQLLEVEKHEMSG---DVACLDIASVPEGRKRSRFLAVGSYDNT 610
           + G  L+   +  ++     +  +  +SG    ++C+  A  P+      +   G+  + 
Sbjct: 554 VDGSILVSLNLLDNLKATTKDASQDSVSGRPDQISCIHAARDPQDFGVIGWWTSGTI-SV 612

Query: 611 IRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLF 670
           + + +L P     +      +S P  +  +++         +  P  L     L++G + 
Sbjct: 613 VDMATLTPLHGEPLRQTDDSASVPRDVALVQLHPP-----ESSGPTML---VALEDGNVI 664

Query: 671 RTVVDMVTGQLSDSRSRFLGLRPPKLFSVVV-GGRAAMLCLSSRPWLGYIHRGRFLLTPL 729
              V +    +S  ++  LG  P +L  +    G   +   +    L Y  +GR + +  
Sbjct: 665 SFNVSVKGFAISGRKTVTLGSGPARLHVLPREDGICNVFATTEHASLIYSSQGRIVYSAT 724

Query: 730 SYETLEYAASFSSDQCVEGVVSVAGNALRVFTI--ERLGETFNETALPLRYTPRRFVLQP 787
           +     + A F S+   + +V    + +R+  +  ERL       ALP+  T RR    P
Sbjct: 725 TAADATFVAPFDSEAFPDSIVLSTEDHIRICHVDNERLTHV---KALPMYETVRRVAYSP 781


>gi|296227035|ref|XP_002807684.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 1 [Callithrix jacchus]
          Length = 1394

 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 124/604 (20%), Positives = 226/604 (37%), Gaps = 107/604 (17%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSAEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        WS    P D    + V  P GG     V++ A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGG-----VVIFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEH 313
           P     +           L  + GV I       Q T   +   ++  + G+I+ +TL  
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLIT 351

Query: 314 DNEHVSELKIKYFDTIPVTASMCVLKS------GYLFAASEFGNHALYQFQAIGADPDVE 367
           D   +  ++  +FD     A+  VL +      G+L AA   G  ++ Q +      ++E
Sbjct: 352 DG--MRSVRAFHFDK----AAASVLTTSVSGTEGFLCAA---GGKSVPQDEX----DEIE 398

Query: 368 ASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE---EEAPQIFTL 424
              S   ET+ G Q   +      +++ I    +        ++  F+   E   +I   
Sbjct: 399 VYGS---ETQSGTQLATYSFEVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVC 455

Query: 425 CGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD--------------- 469
            G G   +L +L+  +    +   +LPG    +WTV   V  E +               
Sbjct: 456 SGHGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEENPKGEGTEQEPSTP 514

Query: 470 ---------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHP 519
                     ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  ++QV P
Sbjct: 515 EADDDSRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSP 574

Query: 520 SGIR 523
            GIR
Sbjct: 575 LGIR 578


>gi|340960602|gb|EGS21783.1| hypothetical protein CTHT_0036510 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 1100

 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 98/516 (18%), Positives = 199/516 (38%), Gaps = 59/516 (11%)

Query: 297 FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
           + L  +YG +  + ++ +   V+ +++         +++  L   YLF  S +GN  L +
Sbjct: 240 YFLADDYGHLHLLRIKTNGVVVTGMEVSRIGETSRASTLVYLGDNYLFVGSHYGNSQLLR 299

Query: 357 FQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRI------ 410
                 +P                          + L  IE  +++ PI+D  I      
Sbjct: 300 LDLENQNPK-------------------------QRLQLIESFQNIGPILDFAIMDMGNR 334

Query: 411 ------ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNV 464
                  N +     +I T  G     +LR +R G+ + ++ +     +   +++++ + 
Sbjct: 335 GDSGQPGNEYSSGQARIVTCSGVHKDGTLRSVRSGVGLEDIGILADLELCRGLFSLRSHG 394

Query: 465 NDEFDAYIVVSFNNATLVLSIGET--VEEVSD--SGFLDTTPSLAVSLIGDDSLMQVHPS 520
           + + +  +V+SF   T V        +EE+S      LD    LAV L     ++ V P+
Sbjct: 395 SLKTN-ILVMSFLTETRVFKFDHQGDIEELSSFCGMTLDQQTLLAVDL-PSGQILHVTPA 452

Query: 521 GIRHIREDG--RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKH 578
               +  +    I  W     R I+   +N   +++++ G  L+   +    ++L+ +  
Sbjct: 453 AATLLDTESGVAITSWTPEEGRCIINASANAEWLLLSVDGVGLVSLSLSNDLRILKEKNL 512

Query: 579 EMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLL 638
             S  +ACL +     G     F   G+  + I + +L+P     + + +  +S P+ L 
Sbjct: 513 NQSDQIACLHVPPQSSGIGVVGFWTSGTV-SIIDLHTLEPIHGESLRTSKDDTSIPQDLA 571

Query: 639 FLE-VQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLF 697
            ++ +   V G         L +     N V F    D      S  R   LG+   K  
Sbjct: 572 LVQLLPPEVSG-------PLLLIATQDGNVVSFNISSDY---SFSGKRRVVLGVTQAKFH 621

Query: 698 SVVVGGRA-AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNA 756
            +       ++L  +  P L Y   GR + + ++ E   Y   F S+   + V     + 
Sbjct: 622 LLPQENNLYSVLATTEHPSLIYGSEGRIVYSAVTAEEAAYVCPFDSEAFPDCVALATDSQ 681

Query: 757 LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLM 792
           +++  ++R  +T+  + LPL    RR    PK+K+ 
Sbjct: 682 IKLARLDRERKTYVRS-LPLNEMVRRIAYSPKEKVF 716


>gi|392306997|ref|NP_001254722.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
           mulatta]
 gi|380812168|gb|AFE77959.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
           mulatta]
 gi|383417835|gb|AFH32131.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
           mulatta]
          Length = 1442

 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 90/418 (21%), Positives = 154/418 (36%), Gaps = 61/418 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  A+  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEH 313
           P     +           L  + GV I       Q T   +   ++  + G+I+ +TL  
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLIT 351

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
           D   +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 352 DG--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 407



 Score = 41.6 bits (96), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 499 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEDNPKGEGTEQ 557

Query: 470 --------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  +
Sbjct: 558 EARSPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYI 617

Query: 515 MQVHPSGIR 523
           +QV P GIR
Sbjct: 618 VQVSPLGIR 626


>gi|119471789|ref|XP_001258220.1| UV-damaged DNA binding protein, putative [Neosartorya fischeri NRRL
           181]
 gi|119406372|gb|EAW16323.1| UV-damaged DNA binding protein, putative [Neosartorya fischeri NRRL
           181]
          Length = 1140

 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 174/839 (20%), Positives = 315/839 (37%), Gaps = 129/839 (15%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y + + + + I  A+  NF   +   +VVA+   LE   P   G ++ + S  I+  +  
Sbjct: 3   YVVPIHRASSIRHALKLNFMNPEEDCLVVAKSNRLEFYSPTPDG-LDLVASCAIYARVTM 61

Query: 64  LAQFRL-TGSQKDYIVVGSDSGRIVILEYNPS-KNVFDKIHQETFGKSGCRRIVPGQYLA 121
           LA+      S  D++ VG+D      L ++ S K V  +           R    G    
Sbjct: 62  LARLPAPANSPTDHLFVGTDRYTYFTLSWDSSEKRVRTERDYVDMSDPSSRESQTGNRCL 121

Query: 122 VDPKGR---------------AVMIGACEKQKLVYVLNRDTAARL-TISSPLEAHKSHTI 165
           +DP GR                + + + ++ + V + +   A R+  +  P  A      
Sbjct: 122 IDPSGRFMTLEIYEGVIAVIPIIQLPSKKRGRAVALPSGPDAPRVGELGEPTTARIEELF 181

Query: 166 VYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVS-RKWS 224
           V S   +      P  A +     E +Q        E Q     Y    G N  +   + 
Sbjct: 182 VRSSAFLHVQEGLPRLALL----YEDNQKKVRLRVRELQ-----YHAATGSNSTADATFG 232

Query: 225 EPVDN------GANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPA 277
           EP D       G++ L+ VP     P  G+L+  E  + Y +    D   +I R  D   
Sbjct: 233 EPADFTQDLELGSSHLIPVPA----PLGGLLILGEMSIKYVDA---DNNEIISRPLD--- 282

Query: 278 ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNE-HVSELKIKYFDTIPVTASMC 336
           E  + +       ++    +LL  +YG +F + L  D++  V   K+ +       + + 
Sbjct: 283 EATIFVAWEQVDSRR----WLLADDYGRLFFLMLVLDSDSQVESWKLDHLGNTSRASVLV 338

Query: 337 VLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI 396
            L  G LF  S  G+    Q   I   P                            L  +
Sbjct: 339 YLGGGVLFLGSHQGDS---QVLRISNGP----------------------------LEVV 367

Query: 397 EQVESLMPIMDMRIANL-----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEM 445
           + + ++ PI+D  I +L           F     +I T  G     +LR +R G+ + E+
Sbjct: 368 QTLSNIAPILDFTIMDLGNRSSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEEL 427

Query: 446 AVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL---SIGETVEEVSDSGFLDTTP 502
            V       + +W ++     +F   ++V+F + T V    S GE VEE+     L  + 
Sbjct: 428 GVLGDMEHITDLWGLQVGSIGDFLDTLLVTFVDETRVFRFSSDGE-VEEMDHFLGLSLSE 486

Query: 503 S--LAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSG 558
           S  LA +L G   ++QV    +     +G   I EW  P +  I    +N   +V+ ++G
Sbjct: 487 STLLATNLPGG-RILQVTEQRVLIAEVEGGMVIYEWTPPNQLIITAASANDDSIVL-VAG 544

Query: 559 GELIYFEVDMTGQLLEVEKHEMSGD--VACLDIASVPEGRKRSRFLAVGSYDNTIRILSL 616
           GEL+   +++T ++  V + +   D  ++ + + S P G      + +  +    ++  L
Sbjct: 545 GELVTV-LNITNEVQIVTQKDFGADSQISGVTVPSSPTG------VCIAGFPQLAKVSVL 597

Query: 617 DPDDCMQILSVQSV----SSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRT 672
              D  + L   SV     + P S+L   V          D P +LF++  + +G +   
Sbjct: 598 KLQDLSE-LHTTSVGLAGEAFPRSVLVANVL--------TDSPPTLFVS--MADGSVITY 646

Query: 673 VVDMVTGQLSDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSY 731
             +     L+      LG   P    +  G G   +      P + Y   GR + + ++ 
Sbjct: 647 SFNTDDYSLTGMTKLILGSEQPTFKKLPRGIGLFNVFATCENPSMIYGSEGRIIYSAVNS 706

Query: 732 ETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
           E       F+S+   E +     + L++  +++   T  +T LP+  T RR    P +K
Sbjct: 707 EGASRICHFNSEAYPESIAVATSHDLKIALVDKERTTQIQT-LPIGATVRRVAYSPSEK 764


>gi|317031116|ref|XP_001392900.2| UV-damaged DNA binding protein [Aspergillus niger CBS 513.88]
          Length = 1124

 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 168/829 (20%), Positives = 310/829 (37%), Gaps = 125/829 (15%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFGAI 61
           Y + + + + I  A+  +F   +   +VVA+   LE+  L PE    +    S  +F  +
Sbjct: 3   YVVPIHRASSIRNALKLHFMNAEEEALVVAKANRLEIYSLTPEG---LNLAASCSLFAKV 59

Query: 62  RSLAQFRL-TGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET----FGKSGCRRIVP 116
             LA+      S  D++ VG+D      L ++  +N   +I  E           R    
Sbjct: 60  TMLARLPAPANSPTDHLFVGTDRYTYCTLSWDGERN---QIRTERNYVDISDPSSREAQT 116

Query: 117 GQYLAVDPKGRAVMI----GACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVY-SICG 171
           G    +DP GR + +    G      +V + ++    ++   S  +A +   +   +   
Sbjct: 117 GNRCLIDPSGRFMTLEVYEGVIAVVPIVQLPSKKRGRQVAPPSGPDAPRVGELGEPTTAR 176

Query: 172 IDCGF-----DNPIFAAIE---LDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKW 223
           ID        DN     ++   L YS A   +   AA E   +    ELDLG +H     
Sbjct: 177 IDELLALLYEDNQKKVRLKVRALHYSAATASTGADAAFEESLDGFSQELDLGASH----- 231

Query: 224 SEPVDNGANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVL 282
                     L+ VP     P  G+LV  E  + Y +    D   ++ R  D   E  + 
Sbjct: 232 ----------LIPVPA----PLGGLLVLGETSIKYVDT---DSNEIVSRPLD---EATIF 271

Query: 283 IVSAATHRQKTLFFFLLQTEYGDIFKVTLEHD-NEHVSELKIKYFDTIPVTASMCVLKSG 341
           +       Q+    +LL  +YG +F + L  D N  V   K+ +       + +  L  G
Sbjct: 272 VAWEQVDSQR----WLLADDYGRLFFLMLVLDSNNQVQSWKLDHLGNTARASVLIYLGGG 327

Query: 342 YLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVES 401
            +F  S  G+  + +                                G  +L  I+ + +
Sbjct: 328 VIFVGSHQGDSQVLRI-------------------------------GNGSLEVIQTLSN 356

Query: 402 LMPIMDMRIANL-----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
           + PI+D  I +L           F     +I T  G     +LR +R G+ + E+ V   
Sbjct: 357 IAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGE 416

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGF-LDTTPSLAV 506
             + + ++ ++      +   ++V+F + T V      GE  E  S  G  L     LA+
Sbjct: 417 MELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEELDSFLGLSLSENTLLAM 476

Query: 507 SLIGDDSLMQVHPSGIRHIREDGRI-NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE 565
           +L G   L       +    E G + NEW  P    I    +N   +V+ +SGG+L+   
Sbjct: 477 NLPGGRILQVTEQRVLIADIEGGMVTNEWTPPDNLVITSASANNDSIVL-VSGGQLMTV- 534

Query: 566 VDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL 625
           +D+   +  + + +   D + +   +VP     S  + +  +    ++  LD     ++ 
Sbjct: 535 LDINNDVRVISQKDFGAD-SQISGVTVP---LSSAGVCIVGFPQLAKVSVLDLGRLSELH 590

Query: 626 SVQ---SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLS 682
           +     +  + P S+L  +V         A+ P++LF++  + +G +     D     L+
Sbjct: 591 TTSLGPAGEAFPRSVLVADVL--------ANSPSTLFIS--MADGSVITYSFDARNYSLT 640

Query: 683 DSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFS 741
                 LG   P    +  G G   +      P L Y   GR + + ++ E       F+
Sbjct: 641 GMNRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHFN 700

Query: 742 SDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
           S+     +     + L++  +++   T  +T LP+  T RR    P +K
Sbjct: 701 SEAYPGSIAVATRHDLKIALVDKERTTQIQT-LPMGETARRVAYSPSEK 748



 Score = 40.4 bits (93), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 118/296 (39%), Gaps = 40/296 (13%)

Query: 918  VAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY-----DLGKK 972
            + G I ++  ++ G+ L  + +  V+G   AL     +++A +   + +Y     D G  
Sbjct: 831  IRGRILVFE-IDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKTVVIYGVVNNDFGAM 889

Query: 973  RLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN----QLYIFADDSVPR 1028
            +L  K  +       V +    + I V D+ +S    +Y   EN     L   A      
Sbjct: 890  KL-EKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEGENGSPDSLTEVARHFQTV 948

Query: 1029 WLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEE 1088
            W T    I  DT    D  GN+  +R  ++++  +EED                  ++E 
Sbjct: 949  WATGVSCIAKDTFLETDAEGNLIVLR--RNLTG-VEEDDK---------------RRLEV 990

Query: 1089 IVQFHVGDVVTSLQKASLVPGGGESV----IYGTVMGSLGAMLAFSSRDDVDFFSHLEMH 1144
              +  +G++V  ++  ++      +V      GTV GS+  + A  + +  DF   L+  
Sbjct: 991  TGEISLGEMVNRIRPVNIQQLASVTVTPRAFLGTVEGSI-YLFAIINPEHQDFLMRLQAT 1049

Query: 1145 MRQEHPPLCG---RDHMAYRSAYFPVKD---VIDGDLCEQFPTLSLDLQRKIADEL 1194
            M  +   L      +   +RS     K+    +DG+L E+F T    LQ +I D +
Sbjct: 1050 MAGKVESLGNIPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVDSV 1105


>gi|384946686|gb|AFI36948.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
           mulatta]
          Length = 1428

 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 90/418 (21%), Positives = 154/418 (36%), Gaps = 61/418 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  A+  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEH 313
           P     +           L  + GV I       Q T   +   ++  + G+I+ +TL  
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLIT 351

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
           D   +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 352 DG--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 407



 Score = 41.6 bits (96), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 499 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEDNPKGEGTEQ 557

Query: 470 --------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  +
Sbjct: 558 EARSPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYI 617

Query: 515 MQVHPSGIR 523
           +QV P GIR
Sbjct: 618 VQVSPLGIR 626


>gi|355698297|gb|EHH28845.1| Cleavage and polyadenylation specificity factor 160 kDa subunit
           [Macaca mulatta]
          Length = 1436

 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 153/417 (36%), Gaps = 59/417 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  A+  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEHD 314
                +           L  + GV I       Q T   +   ++  + G+I+ +TL  D
Sbjct: 295 PYGVALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLITD 352

Query: 315 NEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
              +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 353 G--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 407


>gi|322706594|gb|EFY98174.1| DNA damage-binding protein 1 [Metarhizium anisopliae ARSEF 23]
          Length = 1121

 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 161/789 (20%), Positives = 296/789 (37%), Gaps = 125/789 (15%)

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ--ETFGKSGCRRIVPGQYLA 121
           L + +   S+ D + +G+D  +   + +NP  N  D + Q  E   +   R         
Sbjct: 2   LQRLKPKDSETDLLFIGTDRFQYFNVAWNPETNQLDTVEQTIEDVAEQYMRHSQSQNKCL 61

Query: 122 VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA----------HKSHTIVYSICG 171
           VDP G+ + +   E    V+ L      R  +++ LEA           K+ T ++S  G
Sbjct: 62  VDPTGKFMAMHLWEGVLNVFRL----PMRKGMTTKLEALDQVRLTELWMKASTFLHSQTG 117

Query: 172 IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPV-DNG 230
                 +P  A   L  ++ DQ+    A     K+ +   +     H  R+  + + D  
Sbjct: 118 ------HPKIAF--LYKTQTDQEEARIAVYRLTKDDSRGNVARFDPHRERELDQIISDPY 169

Query: 231 ANMLVTVP-------------GGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPA 277
           A+ML+ VP             G      G+LV  E  + Y +       ++   R     
Sbjct: 170 ASMLIPVPFREEKRYHVRHNEGAKAHLGGLLVVGETLITYFD-------SLTYSRVSSTL 222

Query: 278 ERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH----VSELKI---KYFDTIP 330
           +   + V+   +       +LL  +YG +  +T+E   E     V+ + I   ++ D+  
Sbjct: 223 QDPKIYVAWTEYDD---VHYLLADDYGRLDILTIETATESTGIVVTGMAISPMRFPDSSG 279

Query: 331 VTA---SMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQP 387
            T+   S+  + +  LF AS  G+  L +        D++A              V    
Sbjct: 280 CTSRASSLVYMGNDMLFLASHHGDSQLLRI-------DIDAQ-------------VMVVA 319

Query: 388 RGLKNLVRIEQVESLMPIMDM-------RIANLFEEEAPQIFTLCGRGPRSSLRILRPGL 440
           + L N   I        IMDM       +  N F     +I   CG     SLR +R G+
Sbjct: 320 KALSNNAPILD----FAIMDMGNREGDSQFGNAFSSGQARIVAGCGAYHDGSLRSIRSGV 375

Query: 441 AVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVL--SIGETVEEVSDSGF- 497
            + +  +         ++T++ + +   D  +V S  +  ++   S G   E  +  G  
Sbjct: 376 GLEDQGILDEIQDTKGLFTLRSHQSSHVDTLVVSSVADTRVLRFDSAGGIEEVYAFQGLT 435

Query: 498 LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRIN--EWRTPGKRTIVKVGSNRLQVVIA 555
           LD    LAV+ I D  L+QV P     +  +  +N   W  P  + I    +N+   +++
Sbjct: 436 LDMETLLAVN-ISDGQLLQVTPKSAVLLDSESGVNLCSWDAPSGKAITAASANKGWALLS 494

Query: 556 LSGGELIYFEV--DMTGQLLEVEKHEMS---GDVACLDIASVPEGRKRSRFLAVGSY-DN 609
           + G  L+   +  ++   L +    E S     ++CL  A     R       VG +   
Sbjct: 495 IDGSLLVSLNLHDNLAAVLRDTSGDESSTQPDQISCLHAA-----RDSPDIGVVGWWASG 549

Query: 610 TIRIL---SLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASL---FLNAG 663
           TI I+   +L P     +   +  +S P  +  +++           HP  +    L   
Sbjct: 550 TISIVDLATLQPLHGEPLRQTEDSASVPRDIALVQL-----------HPPQVSGPTLLIA 598

Query: 664 LQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGYIHRG 722
           L++G +    + +    +S  +S  LG  P +L  +    G   +   +    L Y   G
Sbjct: 599 LEDGNVVTFDMSIQGYTISGRKSVTLGSSPARLHVLPQEDGTCNVFATTEHASLIYSAEG 658

Query: 723 RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRR 782
           R + +  + +   Y A F S+     +V    + +R+  I++   T  +T L ++ T RR
Sbjct: 659 RIIYSATTADDATYVAPFDSEAFPNSIVLSTDSHIRLSHIDKERLTHVKT-LSVKETVRR 717

Query: 783 FVLQPKKKL 791
               P  K+
Sbjct: 718 VAYSPTLKV 726


>gi|312076588|ref|XP_003140928.1| xeroderma Pigmentosum Group E Complementing protein [Loa loa]
          Length = 516

 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 122/568 (21%), Positives = 218/568 (38%), Gaps = 98/568 (17%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y +T  +PT +  A+ G+F       +V+A+   +EL      G ++      +FG I +
Sbjct: 5   YIVTAYKPTVVTHALVGSFIVPTELNLVLAKTNRVELFLVTPEG-LKPHRECPVFGRIAT 63

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVD 123
           +  FR  G   D +++ +    + I+ + P+  +  +       + G R    G    V 
Sbjct: 64  IKLFRAPGEDVDSLLILTAKYHLAIIRWTPTSELRTRASGHIVDRVG-RPSETGMIATVH 122

Query: 124 PKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF----DNP 179
             G            +V+ L       +  +   +    +     +  ID  F    D P
Sbjct: 123 SSGL-----------MVFRLYDGLLKVVQWNEGKDLRGFNVRCDDLYIIDITFMSDPDRP 171

Query: 180 IFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-EPVDNGANMLVTVP 238
             A I        QD  G+       N+   EL       S  W  + ++  A+M++ VP
Sbjct: 172 TLAYIY-------QDDNGRHIKVVTLNIEDKELS------SPLWKHDNLEGEASMVIGVP 218

Query: 239 GGGDGPSGVLVCAENFVIYKNQG-----------------HPDVRAVIPRRADLPAERGV 281
              +   G L+   + + Y   G                 HP+  A + R      +R +
Sbjct: 219 ---EPAGGCLIAGPDAISYHKGGDDALRYAGVPGSRLHNTHPNCYAPVDR----DGQRYL 271

Query: 282 LIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSG 341
           L   A       L+  LL+   G   +   E     V ++K++      +   MC L +G
Sbjct: 272 LADLAGN-----LYMLLLEFGKG---QEQDESSTVSVKDMKVESLGNTCIAECMCYLDNG 323

Query: 342 YLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR--GLKNLVRIEQV 399
             F  S FG+  L +                             +PR  G   +  ++  
Sbjct: 324 VCFIGSRFGDSQLIRLST--------------------------EPRADGTGYISLLDSY 357

Query: 400 ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
            +L PI DM +     ++  QI T  G     ++RI+R G+ + E+A  +L G+ + ++T
Sbjct: 358 TNLAPIRDMTVMRCNGQQ--QILTCSGAYKDGTIRIIRNGIGIEELASVELKGIKN-MFT 414

Query: 460 VKKNVNDEFDAYIVVSFNNATLVLSI-GETVEEVSDSGF-LDTTPSLAVSLIGDDSLMQV 517
           ++   + EFD Y+++SF++ T VL I GE +E+   +GF +D     A  L    +++QV
Sbjct: 415 LRTR-DHEFDDYLILSFDSDTHVLLINGEELEDTQITGFVVDGATLWAGCLFQSTTILQV 473

Query: 518 HPSGIRHIREDGRINEWRTPGKRTIVKV 545
               +  I  D  I  W+     T+V V
Sbjct: 474 THGEVILIDGD-NIQIWKASKWITLVAV 500


>gi|414589960|tpg|DAA40531.1| TPA: putative pyridoxal phosphate (PLP)-dependent transferase family
            protein [Zea mays]
          Length = 491

 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 8/54 (14%)

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDRTP------GEILK--KLEEIRNKIV 1213
            +DVI+GDLCEQ+P+L  D+QRKIAD+LDRTP      GE  +  +LE+ R  ++
Sbjct: 434  EDVINGDLCEQYPSLPADMQRKIADQLDRTPMPAALLGEDCQGGRLEQARTALI 487


>gi|444523674|gb|ELV13604.1| Cleavage and polyadenylation specificity factor subunit 1 [Tupaia
           chinensis]
          Length = 1469

 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 88/415 (21%), Positives = 153/415 (36%), Gaps = 55/415 (13%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  A+  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             +D  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  P
Sbjct: 240 IVAISLNITQRVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRA------DLPAERGVLIVSAATHRQKTLF-FFLLQTEYGDIFKVTLEHDNE 316
                +           L  + GV +     H     +   ++  + G+I+ +TL  D  
Sbjct: 295 PYGVALNSLTAGTTAFPLRTQDGVRLTLDCAHAAFISYDKMVISLKGGEIYVLTLVTDG- 353

Query: 317 HVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
            +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 354 -MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 407



 Score = 40.0 bits (92), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 25/128 (19%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  + +          
Sbjct: 527 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKDEEETPKAEGTEQ 585

Query: 470 -------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-LM 515
                         ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  ++
Sbjct: 586 PRAAEAEDGVRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIV 645

Query: 516 QVHPSGIR 523
           QV P GIR
Sbjct: 646 QVSPLGIR 653


>gi|327287424|ref|XP_003228429.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Anolis carolinensis]
          Length = 1294

 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 93/430 (21%), Positives = 162/430 (37%), Gaps = 65/430 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-----------------P 43
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFSNAERNLVVAGTSQLYVYRLNHDSESTTKSDRSSEGK 60

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
            +  ++E + +   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  SHKEKLELVAAFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR  ++     + +V    RDT          E 
Sbjct: 121 HYFEEPELRDGFVQNVHIPKVRVDPDGRCAVMLIYGTRLVVLPFRRDTLTDEHEGVVGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            KS  +   I  I    D  +   I++ +             E +Q   G+ A   Q   
Sbjct: 181 QKSSFLPSYIIDIR-ELDEKLLNIIDMQFLYGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--WS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        WS    P D    + V  P G     GV++ A N ++Y NQ  
Sbjct: 239 SIVAISLNIMQKVHPVIWSLSNLPFDCTQALAVPKPIG-----GVVIFAVNSLLYLNQSV 293

Query: 263 P----------DVRAVIPRRADLPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTL 311
           P          +   V P R     + GV I +  A     +    ++  + G+I+ +TL
Sbjct: 294 PPYGVSLNSLTNGTTVFPLR----IQEGVKITLDCAQAAFISYDKMVISLKGGEIYVLTL 349

Query: 312 EHDNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
             D   +  ++  +FD      +T  M  +  GYLF  S  GN  L ++     +P V A
Sbjct: 350 ITDG--MRSVRSFHFDKAAASVLTTCMITMDPGYLFLGSRLGNSLLLRYTEKLQEPPVNA 407

Query: 369 SSSTLMETEE 378
           +     +TEE
Sbjct: 408 AKDATEKTEE 417


>gi|340371789|ref|XP_003384427.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Amphimedon queenslandica]
          Length = 1408

 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 129/599 (21%), Positives = 225/599 (37%), Gaps = 103/599 (17%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVL------ELLRPENSGRIETLVS 54
           MY     +  PTG+    + +F  ++  ++ VA   +L      +L R +   ++   + 
Sbjct: 1   MYAVYREVHPPTGVEHCTSCHFVHSEKEQVAVASTSLLRIFDVAQLQRNDGKAKLVQCLE 60

Query: 55  TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG----KSG 110
               G I+SL + RL  S +D +++  +  ++ I+EYNP  N    +    F     + G
Sbjct: 61  FSFHGNIQSLDKVRLRHSDRDCLLLSFNDAKLSIVEYNPETNGLKTVSMHQFEDEEIRGG 120

Query: 111 CRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKS---HTIV- 166
                    + VDP+GR  ++        V    +D    L+I +PL    S   H I+ 
Sbjct: 121 ILHNDSRPVVKVDPEGRCAVMLLFGSHLAVCPFQQD----LSIDTPLSPSPSLDTHDILP 176

Query: 167 -YSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEA-----------QKNLTFYELDL 214
            Y+I   D     P+    ++ + E     T    SE            Q ++    L L
Sbjct: 177 TYTISLRD--LPEPLPVIKDMTFIEGYTSPTLLFLSEVSPTWAGRISLRQDSMMLLGLSL 234

Query: 215 GLNHVSRK--WS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVI 269
             +  S    W+    P D+     V  P G     GVLV   N +IY NQ  P     +
Sbjct: 235 NTSDKSHTVIWTLKNLPFDSSYLHPVPKPLG-----GVLVFGANTLIYLNQSSPPYGLSL 289

Query: 270 PRRAD-----LPAERGVLIVSAATHRQKTLFF----FLLQTEYGDIFKVTLEHDN--EHV 318
               D     L    G L +       +++F      L+  + GDI+ VTL  D+    V
Sbjct: 290 NSITDYTTRFLLKNEGSLGIRLDC--SQSVFISNEQLLVSLQSGDIYIVTLFPDSGMRGV 347

Query: 319 SELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETE- 377
             +      +  +++ +C +K  +LF  S   N  L ++        VE     +++ + 
Sbjct: 348 KRITFDKAASSILSSCICSIKPHFLFLGSRLANSLLLRYSTTVKQNIVEPIGGAILDLDD 407

Query: 378 -----EGFQPVFFQPRGLKNLVRIEQVESLM---PIMDMRI---ANLFEEEAPQI----- 421
                E           L     +E  +SL+   P++   I   A L EE   +      
Sbjct: 408 IEVYGESAVSQSTSSSSLLTNYSLEVCDSLLCIGPVVKATIGEPAFLSEEFVDKSDLDLE 467

Query: 422 FTLC-GRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV----------------KKNV 464
             LC G G   +L +L+  +    +   +LPG    +WTV                 +N 
Sbjct: 468 LVLCSGHGKNGALSVLQRTIRPQVVTTFELPGCID-MWTVKSEGEEEEKGEETKEEGQNE 526

Query: 465 NDEFDA-------------YIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
             E D              Y+++S +++T+VL  G+ + E+  SGF   + ++    +G
Sbjct: 527 GGEKDQSREKEEKGSGQHDYLILSRSDSTMVLQTGQEITELDQSGFATQSATVFAGNVG 585


>gi|71407487|ref|XP_806209.1| damage-specific DNA binding protein [Trypanosoma cruzi strain CL
            Brener]
 gi|70869885|gb|EAN84358.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
          Length = 508

 Score = 57.0 bits (136), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 132/370 (35%), Gaps = 81/370 (21%)

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK------SLELLHKTQVEG 944
            N  DK+   L     A     +P   +      I+  VE+GK       L  +    VEG
Sbjct: 81   NEADKDKAILFGTTFA-----FPDEQLPRSSRFIWYCVEQGKLISERPQLRQIGSKDVEG 135

Query: 945  IPLALC---QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVS-----INTYRDR 996
                 C    + GR+  GI   + LY       +   E  +   TIV+            
Sbjct: 136  ALQCCCIVPNYVGRIALGINGCIALYSWNAADSVFVAEETICIGTIVTRVLPIFQGDASY 195

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD-KFGNIYFVRL 1055
            +   D + S  F +    +  L I A DS PR            M GA  + GNIY +  
Sbjct: 196  MVAFDARHSCFFIQVDTIQGSLEIVARDSEPR----------GVMDGAVFQLGNIYNICF 245

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNG--APNKMEEIVQFHVGDVVTSLQKAS-------- 1105
              D  +          +       +   +  K+E   Q+H+GD+VT++Q  S        
Sbjct: 246  GDDYYNFFCLSRGASTLPSVSNATSATVSSGKLETSAQYHLGDMVTAMQLGSFAPCSVTN 305

Query: 1106 --------LVPG-GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRD 1156
                    L+PG  G  V++GT  G+ G +   S+   + F   LE+ +    P L G +
Sbjct: 306  IAVPIPTTLIPGICGPQVVFGTSHGAFGTITPVSNETYL-FLKALEVAVSSVVPALGGFE 364

Query: 1157 HMAY-------------RSAYFPVKDVI------------------DGDLCEQFPTLSLD 1185
            H+ Y             R+A F   +V+                   GDL E F T S  
Sbjct: 365  HVTYREVLRAGQERGYSRNASFENANVVSSGVFDKHRKRYLSRCVCSGDLIESFLTFSQT 424

Query: 1186 LQRKIADELD 1195
            +Q++I  E +
Sbjct: 425  IQQRILREAE 434


>gi|449019082|dbj|BAM82484.1| UV-damaged DNA binding protein [Cyanidioschyzon merolae strain 10D]
          Length = 1372

 Score = 57.0 bits (136), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 161/412 (39%), Gaps = 47/412 (11%)

Query: 404 PIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
           PI D+ +          I T  G     SLRI+R G+   E A  +L G+  A++T+   
Sbjct: 529 PIQDLLVTGDDSFSDGHIITCSGVSRMGSLRIIRNGIGFVEHAAVELDGI-KALFTLPSL 587

Query: 464 VNDEFDAYIVVSFNNATLVLSIGETVEEVS-DSGFLDTTPSLAVSLIGDDSLMQVHPSGI 522
            + E+D ++VVSF   T VL +    E V  +S  +D    LA+ L  +   + V  S +
Sbjct: 588 TSPEWDEFLVVSFTAETRVLRLAAHDELVEVESLAVDEATILAMRLPAEQLALWVTASYV 647

Query: 523 RHIREDGRINE-----WRTPGKRTIVKVGSNRLQ--VVIALSGGELIYFEVDMTGQLLEV 575
             +  D  + E     W  P    I     + L   V+++ S  +L   +   T  L+ V
Sbjct: 648 GLV--DLTLLERPAVAWTPPSSEQITNAVFDELHKLVLVSTSNAQLYVLQQRKT-SLVPV 704

Query: 576 EKHEMSGDVACLDIASVPEGRKRSRFLAVGSY-DNTIRILSLDPD-------DCMQILSV 627
               +  +VAC+  A           +A+G++ ++ IR+  L  D       +C++  ++
Sbjct: 705 GSQTLPAEVACIHAA--------YGIVALGTWAESRIRLFRLHEDTGNRWELECIRESAL 756

Query: 628 QSVSSPPESLL-FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTG------- 679
            S S P   LL +L+    +  + G    A L L   + +G LF   V            
Sbjct: 757 PSTSVPRSVLLTYLDDHGGLMADHGGR--AHLCLLVAVGDGRLFAFNVSQPDAKRSGPEP 814

Query: 680 --------QLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSY 731
                   QL   R   LG RP  L ++ + G   +     R  + + H G      ++ 
Sbjct: 815 EDLSKCELQLQHPRQLRLGSRPAALNNLQLHGMRYVFAACGRASVIHAHHGTLFCGNVNL 874

Query: 732 ETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRF 783
             +  A  F +    + +       L +  IE + +  +     LR  PRR 
Sbjct: 875 RDVTRAVRFHTKGFPDSIAVATEQGLALGGIEHI-QQLHIRRHDLREQPRRI 925


>gi|336369683|gb|EGN98024.1| hypothetical protein SERLA73DRAFT_109335 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336382464|gb|EGO23614.1| hypothetical protein SERLADRAFT_449959 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 1257

 Score = 57.0 bits (136), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 115/564 (20%), Positives = 219/564 (38%), Gaps = 79/564 (14%)

Query: 297 FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQ 356
           FL+  +YG +  +++   NE  +   +   +T   T ++  L S  L+  S FG+  L +
Sbjct: 332 FLIGDKYGRLAMLSIGI-NEGTTLTLVALGETSSAT-TLTYLTSQVLYVGSHFGDSQLLR 389

Query: 357 FQA------------IGADPDVEASSS-----TLMETEEGFQPVFFQPRGLKNLVRIEQV 399
                          + +D +   SSS      + E+ +         RG   L  IE  
Sbjct: 390 INTTPVQSLESPTLPVPSDINTTTSSSLAAKGKMEESSDRSGGCIINGRG-SFLSVIESY 448

Query: 400 ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVP--SAV 457
           +++ PI+D  + ++       + T  G     S+ I+R G     MA   + G+   + +
Sbjct: 449 KNIAPIIDAALVDVDNSGQHAVVTCSGGQNTGSISIVRNGADFKAMA--NMEGIVDVTNI 506

Query: 458 WTVKKNVNDEFDAYIVVSFNNATLVLS-----IGETVEEVSDSGFLDTTPSLAV------ 506
           W ++ N  D  D ++ VS   AT +LS     +   V  VS  GF+ T+P+L +      
Sbjct: 507 WPLRANYYDTVDTHVAVSTFKATHILSFDGRNVASHVNPVS-KGFITTSPTLVIANVLGR 565

Query: 507 ---------SLIGDDSLMQVHPSGIR------HIREDGRINEWRTPGK-----------R 540
                    S +    ++Q+   GI        + E  R+ +  TP K           R
Sbjct: 566 PKAPGQATNSYVDSSLVVQITSRGIALLEYAVELGEYARVGDIWTPAKLSSTNGPGWENR 625

Query: 541 TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG------DVACLDIASVPE 594
            IV   +N  Q V+AL+ G ++   +D       +   ++ G      +++ +    +  
Sbjct: 626 EIVAASANGSQFVLALNSGRIVLLNLDDRNCFDCLNWRDLDGSSNYPTEISAISCVPLNP 685

Query: 595 GRKRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSV--SSPPESLLFLEVQASVGGEDG 651
            +K S ++ V  +  N I ILS +       +    V  S P   LLF   ++ +  +  
Sbjct: 686 SKKFSMYIVVSFWSSNHIEILSANAASHFASICKTPVLPSLPRSLLLFNFTRSDIPKQTE 745

Query: 652 ADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLS 711
            +     +L  GL +G +     +    +L   +   +G  P  L    V GR  +    
Sbjct: 746 YNQ----YLIVGLGDGSVVS--YEFKKEELHGQKIFSVGNVPVTLHPCDVEGRRTVFACG 799

Query: 712 SRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNE 771
           SR  + +  + R   +PL    +   +  ++      V+      L + +++ L + +  
Sbjct: 800 SRTSILFWDKERLHHSPLMLNEVSAVSRLNTTVFDSSVILATSTGLVIGSVKNLDKLYIR 859

Query: 772 TALPLRY-TPRRFVLQPKKKLMVI 794
            ++PL Y  PRR +  P  +   +
Sbjct: 860 -SIPLGYDNPRRILHVPSLRAYAV 882


>gi|229335612|ref|NP_001108153.2| cleavage and polyadenylation specificity factor subunit 1 [Danio
           rerio]
          Length = 1449

 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 155/410 (37%), Gaps = 67/410 (16%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-----------------P 43
           MY        PT +  A+  NF  ++   +VVA    L + R                  
Sbjct: 1   MYAVYRQAHPPTAVEFAVYCNFISSQEKNLVVAGTSQLYVYRIIYDVESTSKSEKSSDGK 60

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S  +FG + S+A  +L G+ +D +++     ++ ++EY+P  +    +  
Sbjct: 61  SRKEKLEQVASFSLFGNVMSMASVQLVGTNRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGR-AVMI--GACEKQKLVYVLNRDTAARLTISSP 156
             F     + G  + V    + VDP+ R AVM+  G C    +V    +DT A       
Sbjct: 121 HYFEEPELRDGFVQNVHIPMVRVDPENRCAVMLVYGTC---LVVLPFRKDTLADEQEGIV 177

Query: 157 LEAHKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
            E  KS  +   I             ID  F +  +    L   E +Q   G+ A   Q 
Sbjct: 178 GEGQKSSFLPSYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVR-QD 236

Query: 206 NLTFYELDLGLNHVSRK--WS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
             +   + L +        WS    P D    M V  P G     GV+V A N ++Y NQ
Sbjct: 237 TCSIVAISLNIMQKVHPVIWSLSNLPFDCNQVMAVPKPIG-----GVVVFAVNSLLYLNQ 291

Query: 261 GHP----------DVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVT 310
             P          +     P R   P E   + +  +     T    ++  + G+I+ +T
Sbjct: 292 SVPPFGVSLNSLTNGTTAFPLR---PQEEVKITLDCSQASFITSDKMVISLKGGEIYVLT 348

Query: 311 LEHDNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQF 357
           L  D   +  ++  +FD      +T  M  ++ GYLF  S  GN  L ++
Sbjct: 349 LITDG--MRSVRAFHFDKAAASVLTTCMMTMEPGYLFLGSRLGNSLLLRY 396


>gi|414871564|tpg|DAA50121.1| TPA: hypothetical protein ZEAMMB73_864318 [Zea mays]
          Length = 683

 Score = 56.6 bits (135), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/31 (77%), Positives = 29/31 (93%)

Query: 1168 KDVIDGDLCEQFPTLSLDLQRKIADELDRTP 1198
            +DVIDGDLCEQ+P+L  D+QRKIA+ELDRTP
Sbjct: 626  EDVIDGDLCEQYPSLLADMQRKIANELDRTP 656


>gi|402591342|gb|EJW85272.1| hypothetical protein WUBG_03818, partial [Wuchereria bancrofti]
          Length = 1025

 Score = 56.6 bits (135), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 119/577 (20%), Positives = 216/577 (37%), Gaps = 84/577 (14%)

Query: 20  GNFSGTKTPEIVVARGKVLELLRPE-------------NSGRIETLVSTEIFGAIRSLAQ 66
           G F   K  +IV    K L + R                + R+E L++  +   ++S A 
Sbjct: 20  GKFFPEKGLQIVTIGVKYLRIFRANPYALLLKDEQQWAQTTRLECLLAVRLLAPVQSFAI 79

Query: 67  FRLTGSQK-DYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG----KSGCRRIVPGQYLA 121
            R++ +   D  ++G D  ++ I+  NP+      I    F     K G  + +P   + 
Sbjct: 80  ARISQNPDCDSFLLGFDDAKLSIVAVNPADRCLKTISLHCFEDELLKDGFTKNLPRPVIR 139

Query: 122 VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIF 181
           VDP  R   +    +   V   N  +A   + +  L    S  +      +D  F +  +
Sbjct: 140 VDPGQRCASMLVFGRYLAVLPFNDSSAQLHSYTVQLSQIDSRLVNV----VDMVFLDGYY 195

Query: 182 AAIELDYSEADQDSTGQAASEAQKNLTF-YELDLGLNHVSRKW---SEPVDNGANMLVTV 237
               L   E  Q + G+A             L++    ++  W   + P+D    + +  
Sbjct: 196 EPTLLFLYEPVQTTCGRACVRYDTMCVLGVSLNVKEQVLASVWQLTNLPMDCNQILAIPR 255

Query: 238 PGGGDGPSGVLVCAENFVIYKNQGHP----DVRAVIPRRADLPAE---------RGVLIV 284
           P GG     +L+ A N +IY NQ  P     + + +      P +          G ++ 
Sbjct: 256 PVGG-----ILLVATNELIYLNQSVPPCGISLNSCMDGFTKFPLKDFKHMALTLDGAVVT 310

Query: 285 SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVS---ELKIKYFDTIPVTASMCVLKSG 341
             +T++       LL    G +F + L  D  +     ELK ++   IP T + C    G
Sbjct: 311 VVSTNK------ILLCDRNGRLFTLILVTDATNSVKSLELKFQFETVIPCTMTSCA--PG 362

Query: 342 YLFAASEFGN----HALYQFQAIGADPDVEASSST---LMETEEGFQ------PVFFQPR 388
           YLF  S   +    H +++   +      +   ST     E +E F+      P   +P 
Sbjct: 363 YLFIGSRLCDSVFLHCIFEQSTLEESATKKIKLSTEPNANEEDEDFELYGEMLPKVAKPD 422

Query: 389 GLKNLVRIEQVESLMPIMDMR--------IANLFEEEAPQ--IFTL---CGRGPRSSLRI 435
             + L+ I  ++ L+ +   +        I+  F+E   +  +F L   CG G   S+ I
Sbjct: 423 ITEELLNIRVLDKLLNVGPCKKITGGCPSISAYFQEITRKDPLFDLVCACGHGKFGSICI 482

Query: 436 LRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDS 495
           L+  +    +  S + GV    W + +   D+   Y + S    TL L     + E+   
Sbjct: 483 LQRSIRPEIITSSSIEGV-VQYWAIGRR-EDDTHMYFIASRELGTLALETDNDLVELEAP 540

Query: 496 GFLDTTPSLAVSLIGDDSL-MQVHPSGIRHIREDGRI 531
            F  +  ++A   + D  L +QV  S +  + E  +I
Sbjct: 541 IFSTSESTIAAGELADGGLAVQVTTSSLVMVAEGQQI 577


>gi|56676371|ref|NP_037423.2| cleavage and polyadenylation specificity factor subunit 1 [Homo
           sapiens]
 gi|23503048|sp|Q10570.2|CPSF1_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
           subunit 1; AltName: Full=Cleavage and polyadenylation
           specificity factor 160 kDa subunit; Short=CPSF 160 kDa
           subunit
 gi|16878041|gb|AAH17232.1| Cleavage and polyadenylation specific factor 1, 160kDa [Homo
           sapiens]
 gi|119602516|gb|EAW82110.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform
           CRA_c [Homo sapiens]
 gi|123993607|gb|ABM84405.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
           construct]
 gi|123999626|gb|ABM87355.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
           construct]
 gi|307684758|dbj|BAJ20419.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
           construct]
          Length = 1443

 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 154/418 (36%), Gaps = 61/418 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEH 313
           P     +           L  + GV I       Q T   +   ++  + G+I+ +TL  
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLIT 351

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
           D   +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 352 DG--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 407



 Score = 41.2 bits (95), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 27/130 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 499 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEDNPKGEGTEQ 557

Query: 470 ---------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS- 513
                           ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  
Sbjct: 558 EPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRY 617

Query: 514 LMQVHPSGIR 523
           ++QV P GIR
Sbjct: 618 IVQVSPLGIR 627


>gi|397497327|ref|XP_003819464.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Pan paniscus]
 gi|410336497|gb|JAA37195.1| cleavage and polyadenylation specific factor 1, 160kDa [Pan
           troglodytes]
          Length = 1442

 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 154/418 (36%), Gaps = 61/418 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEH 313
           P     +           L  + GV I       Q T   +   ++  + G+I+ +TL  
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLIT 351

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
           D   +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 352 DG--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 407



 Score = 41.6 bits (96), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 499 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEDNPKGEGTEQ 557

Query: 470 --------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  +
Sbjct: 558 EPSTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYI 617

Query: 515 MQVHPSGIR 523
           +QV P GIR
Sbjct: 618 VQVSPLGIR 626


>gi|410042329|ref|XP_003954555.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 1 [Pan troglodytes]
          Length = 1296

 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 154/418 (36%), Gaps = 61/418 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEH 313
           P     +           L  + GV I       Q T   +   ++  + G+I+ +TL  
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLIT 351

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
           D   +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 352 DG--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 407



 Score = 41.6 bits (96), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 499 EIVVCSGHGKNEALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEDNPKGEGTEQ 557

Query: 470 --------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  +
Sbjct: 558 EPSTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYI 617

Query: 515 MQVHPSGIR 523
           +QV P GIR
Sbjct: 618 VQVSPLGIR 626


>gi|322792443|gb|EFZ16427.1| hypothetical protein SINV_15375 [Solenopsis invicta]
          Length = 1532

 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 123/583 (21%), Positives = 225/583 (38%), Gaps = 97/583 (16%)

Query: 28  PEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIV 87
           P++ + R +    +RP    ++E L    + G I S+    L GSQ+D +++     ++ 
Sbjct: 13  PDVDMTRREKYTEIRPPKM-KLECLAQYTLHGNIMSMQAVHLIGSQRDSLLLSFRDAKLS 71

Query: 88  ILEYNPS----KNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVL 143
           ++EY+      + V     +E   K G         + VDP+GR  ++    ++ +V   
Sbjct: 72  VVEYDQDIHDLRTVSLHYFEEEEIKDGWTNHHHIPIVRVDPEGRCAVMLIFGRKLVVLPF 131

Query: 144 NRDTA---------ARLTISSPLEAHKSHTIVYSICG------IDCGFDNPIFAAIELDY 188
            +D +         A+LT S+      S+ IV           ID  F +  +    L  
Sbjct: 132 RKDPSLDDGDLLDTAKLTSSNKAPILSSYMIVLKSLEEKMDNVIDLQFLHGYYEPTLLIL 191

Query: 189 SEADQDSTGQAASEAQKNLTFYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDG 243
            E  +   G+ A   Q       + L +        WS    P D    + V  P G   
Sbjct: 192 YEPVRTFAGRIAVR-QDTCAMVAISLNIQQRVHPIIWSVSNLPFDCYQAVPVKKPLG--- 247

Query: 244 PSGVLVCAENFVIYKNQGHPDVRAVIPRRAD------LPAERGV-LIVSAATHRQKTLFF 296
             G L+ A N +IY NQ  P     +   AD      L  + GV + +  A     +   
Sbjct: 248 --GTLIMAFNSLIYLNQSIPPYGVSLNSLADTSTNFPLKPQEGVKMSLEGAQVAFISADR 305

Query: 297 FLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHA 353
            ++  + G+++ ++L  D+  +  ++  +FD      +T+ +C+ +  YLF  S  GN  
Sbjct: 306 LVISLKSGELYVLSLFADS--MRSVRGFHFDKAAASVLTSCVCMCEDNYLFLGSRLGNSL 363

Query: 354 LYQFQAI---------GADPDVEASSSTLMETEEGFQ----------------PVFFQPR 388
           L +F            G +  +E + S     ++  Q                P   +  
Sbjct: 364 LLRFTEKEPETLKNLNGGEITIEENESEETPAKKAKQDFLGDWMASDVLDIKDPEELEVY 423

Query: 389 GLKNLVRI-------EQVESLMPI-----MDMRIANLFEEEAPQ-------IFTLCGRGP 429
           G +    I       E  +SL+ I     + M       EE  Q       + T  G G 
Sbjct: 424 GSETHTSIQITSYIFEVCDSLLNIGPCGNISMGEPAFLSEEFLQNQDPDVELVTTSGYGK 483

Query: 430 RSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE--------FDAYIVVSFNNATL 481
             +L +L+  +    +   +LPG    +WTV   +N++          A++++S  ++T+
Sbjct: 484 NGALCVLQRSIRPQVVTTFELPGC-EDMWTVIGTLNNDEIKTEAEGSHAFLILSQEDSTM 542

Query: 482 VLSIGETVEEVSDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIR 523
           +L  G+ + EV  SGF    +   A +L  +  ++QV   G+R
Sbjct: 543 ILQTGQEINEVDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVR 585


>gi|431908147|gb|ELK11750.1| Cleavage and polyadenylation specificity factor subunit 1 [Pteropus
           alecto]
          Length = 671

 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 92/433 (21%), Positives = 166/433 (38%), Gaps = 64/433 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR------------------ 42
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEAPTKNDRSAEGK 60

Query: 43  --PENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK 100
              E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    
Sbjct: 61  AHREHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKT 120

Query: 101 IHQETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSP 156
           +    F     + G  + V    + VDP GR   +     + +V    R++ A       
Sbjct: 121 LSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLV 180

Query: 157 LEAHKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQ 204
            E  +S  +   I  +    D  +   ++L +             E +Q   G+ A   Q
Sbjct: 181 GEGQRSSFLPSYIIDVR-ALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-Q 238

Query: 205 KNLTFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKN 259
              +   + L +        W   S P D    + V  P G     GV+V A N ++Y N
Sbjct: 239 DTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLN 293

Query: 260 QGHPDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLE 312
           Q  P     +           L  + GV I +  A     +    ++  + G+I+ +TL 
Sbjct: 294 QSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLV 353

Query: 313 HDNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEAS 369
            D   +  ++  +FD      +T+SM  ++ GYLF  S  GN  L ++     +   EA 
Sbjct: 354 TDG--LRSVRAFHFDKAAASVLTSSMVTMEPGYLFLGSRLGNSLLLKY----TEKLQEAP 407

Query: 370 SSTLMETEEGFQP 382
           +ST+ E  +  +P
Sbjct: 408 ASTVREAADKEEP 420



 Score = 40.0 bits (92), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 527 EIVMCSGYGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEQEETPKGEAVEP 585

Query: 470 --------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  +
Sbjct: 586 EPSAPDADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYI 645

Query: 515 MQVHPSGIR 523
           +QV P GIR
Sbjct: 646 VQVSPLGIR 654


>gi|67516629|ref|XP_658200.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4]
 gi|40747539|gb|EAA66695.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4]
 gi|259489136|tpe|CBF89158.1| TPA: damaged DNA binding protein (Eurofung) [Aspergillus nidulans
           FGSC A4]
          Length = 1132

 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 119/607 (19%), Positives = 230/607 (37%), Gaps = 84/607 (13%)

Query: 223 WSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVL 282
           +++ +D GA+ L+ VP       G+L+  E  + Y +  + ++          P E   +
Sbjct: 233 YAQELDLGASHLIPVPAPLAAAGGLLILGETSIKYVDADNNEI-------VSQPLEEATI 285

Query: 283 IVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGY 342
            V+     Q     +LL  +YG +F + L   N  V   ++         + +  L  G 
Sbjct: 286 FVA---WEQVDSQRWLLADDYGRLFFLMLVLRNSEVERWELHSLGNTSRASVLVYLGGGV 342

Query: 343 LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
           +F  S  G+    Q   IG               ++ FQ              I+ + ++
Sbjct: 343 VFVGSHQGDS---QVIRIG---------------DQSFQV-------------IQTLSNI 371

Query: 403 MPIMDMRIANL-----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLP 451
            P++D  I +L           F     +I T  G     +LR +R G+ + E+ V    
Sbjct: 372 APVLDFTIMDLGNRTSENQMHEFSSGQARIVTGSGAFDDGTLRSVRSGVGLEELGVLGDM 431

Query: 452 GVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPS----LAVS 507
              + +W ++     +F   ++V+F N T V       E      FL  + S    LA +
Sbjct: 432 EHITDLWGLQVGSRGDFLDTLLVTFVNETRVFRFSPDGEAEELESFLGLSLSENTLLAAN 491

Query: 508 LIGDDSLMQVHPSG--IRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE 565
           L G   ++QV      I  I     I EW TP  + I+   S     ++ ++GG+ +   
Sbjct: 492 LPG-SRILQVTEQRVLIADIECGMTIFEW-TPKNQLIITAASANDDTIVLVAGGKHVTV- 548

Query: 566 VDMTGQLLEVEKHEMSGD--VACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQ 623
           +D+  +   V + +   D  ++ + + + P        + +  +    ++  L   D   
Sbjct: 549 LDIQSEARVVSEKDFGADNQISGVTLPTTPTD------VCIVGFPQLAKVSVLKLQDLSH 602

Query: 624 ILSVQ---SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQ 680
           I S     +  + P S+L   V         A++  +LF++  + +G +     +     
Sbjct: 603 ISSTSLGPAGEAFPRSVLVASVL--------AENAPTLFIS--MADGSVITYDYNDQDHS 652

Query: 681 LSDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAAS 739
           LS      LG   P    +  G G + +      P L Y   GR + + ++ E       
Sbjct: 653 LSGMNKLVLGSEQPTFKKLPRGNGLSNVFATCENPSLIYGSEGRIIYSAVNSEGASRICH 712

Query: 740 FSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQ 799
           F+S+   E +       L++  +++   T  +T LP++ T RR    P +K   +   ++
Sbjct: 713 FNSEAYPESIAVATAQELKIGLVDKERTTQIQT-LPIKATVRRVAYSPSEKAFGMGTIER 771

Query: 800 GALTAEE 806
             ++ EE
Sbjct: 772 KLVSGEE 778



 Score = 48.1 bits (113), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 131/304 (43%), Gaps = 31/304 (10%)

Query: 920  GYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKR---LLR 976
            GYI ++  V+ G+ L  + + +V+G   AL     +++A +   + ++ +  +     L+
Sbjct: 843  GYIRVFE-VDNGRKLAKVAQERVKGACRALAVMGDKIVAALVKTVVVFQVVPRSGGLQLQ 901

Query: 977  KCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDEN----QLYIFADDSVPRWLTA 1032
            +  +       V I   R+ I + D+ +S    +Y   EN    +L   A      W T 
Sbjct: 902  RLASYRTSTAPVDITVTRNVIAIADLMKSVCVVEYHEGENGAPDKLVEVARHFQTVWATG 961

Query: 1033 AHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQF 1092
               +  DT   +D  GN+  +R  ++ S   E+D    ++  E   LN   N++  +   
Sbjct: 962  VTSVAPDTYLESDAEGNLIVLR--RNRSGVEEDDRRRLEVTGEIC-LNEMVNRIRPVN-- 1016

Query: 1093 HVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPL 1152
                 +  L  A++VP         TV GS+  + A  + D  DF   L+  M      L
Sbjct: 1017 -----IQQLPSATVVP----RAFLATVEGSI-YLYAIINPDYQDFLMRLQATMASRADSL 1066

Query: 1153 CG---RDHMAYRS----AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKL 1205
             G    D+ A+R+    A  P +  +DG+L E+F T    +Q++I D +  +  E+   +
Sbjct: 1067 GGIPFTDYRAFRTMTRQATEPYR-FVDGELIERFLTCEPAVQKEIVDIVGSSLEEVRAIV 1125

Query: 1206 EEIR 1209
            E +R
Sbjct: 1126 EALR 1129


>gi|407416557|gb|EKF37684.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi
            marinkellei]
          Length = 1276

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 133/370 (35%), Gaps = 81/370 (21%)

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK------SLELLHKTQVEG 944
            N  DK+   LL    A     +P   +      I+  VE+GK       L  +    VEG
Sbjct: 849  NEADKDKAILLGTTFA-----FPDEQLPRSSRFIWYSVEQGKLLSERPQLRQIGSKDVEG 903

Query: 945  IPLALC---QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVS-----INTYRDR 996
                 C    + GR+  GI   + LY       +   E  +   TIV+            
Sbjct: 904  ALQCCCIVPNYVGRIALGINGCIALYSWNAADSVFVAEETICIGTIVTRVLPIFQGDASY 963

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD-KFGNIYFVRL 1055
            +   D + S  F +    +  L I A DS PR            M GA  + GNIY +  
Sbjct: 964  MVAFDARHSCFFIQVDTIQGSLEIVARDSEPR----------GVMDGAVFQLGNIYDICF 1013

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNG--APNKMEEIVQFHVGDVVTSLQKAS-------- 1105
              D  +          +      ++   +  K++   Q+H+GD+VT++Q  S        
Sbjct: 1014 GDDYYNFFCLSRGATTLPSASNAISATVSSGKLKTRAQYHLGDMVTAMQLGSFAPCSVTN 1073

Query: 1106 --------LVPG-GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRD 1156
                    L+PG  G  V++GT  G+ G +   S+   + F   LE+ +    P L G +
Sbjct: 1074 SAVPIPTTLIPGICGPQVVFGTSHGAFGTITPVSNETYL-FLKALEVAVSSVVPALGGFE 1132

Query: 1157 HMAY-------------RSAYFPVKDVI------------------DGDLCEQFPTLSLD 1185
            H+ Y             R+A F   +V+                   GDL E F T    
Sbjct: 1133 HVTYREVLRAGQERGYSRNASFENVNVVSSEVFNKRRKRYLSRCVCSGDLIESFLTFPHS 1192

Query: 1186 LQRKIADELD 1195
            +Q++I  E D
Sbjct: 1193 IQQRILREAD 1202


>gi|348512553|ref|XP_003443807.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Oreochromis niloticus]
          Length = 1456

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 105/541 (19%), Positives = 212/541 (39%), Gaps = 63/541 (11%)

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYE-TLEYAASFSSDQCVEGVVSVA 753
            + F  + G     +C  S  W+    RG   L P++ + ++E  + F +  C +G +   
Sbjct: 945  RFFEDISGYSGVFICGPSPHWMLVTSRGALRLHPMTIDGSIESFSPFHNINCPKGFLYFN 1004

Query: 754  GNA-LRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKK 812
                LR+  +        +   P+R  P R  +     +   +E+   A+      + K+
Sbjct: 1005 KQGELRISVLPTYLSY--DAPWPVRKIPLRCTVH---YVSYHVESKVYAVCT----SVKE 1055

Query: 813  ECFEAAGMGENGNGNMDQMENGDDENKYDPLS-DEQYGYPKAESDKWVSCIRVLDPRS-- 869
             C     M               +E +Y+ +  DE+Y +P+ E       I+++ P S  
Sbjct: 1056 PCTRIPRMT-------------GEEKEYEVIERDERYIHPQQEK----FSIQLISPVSWE 1098

Query: 870  ANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRFV 928
            A     ++L++ E    + TV    +E  + L    A G        +   G I I   +
Sbjct: 1099 AIPNTRIDLEEWEHVTCMKTVALRSQETVSGLKGYIAAGTCLMQGEEVTCRGRILILDVI 1158

Query: 929  E---------EGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL--LRK 977
            E              ++L++ + +G   ALC   G L++ IG  + L+ L    L  +  
Sbjct: 1159 EVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGYLVSAIGQKIFLWVLKDNDLTGMAF 1218

Query: 978  CENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHID 1037
             + +L+ + + SI  +   I   D+ +S    +Y+ +   L + + D+ P  + +   + 
Sbjct: 1219 IDTQLYIHQMFSIKNF---ILAADLMKSISLLRYQEESKTLSLVSRDAKPLEVYSIEFMV 1275

Query: 1038 FDTMAG---ADKFGNIY-FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFH 1093
             +   G   +D+  N+Y ++ LP+       ++  GG     +   N   N +    +  
Sbjct: 1276 DNNQLGFLVSDRDKNLYVYMYLPE------AKESFGGMRLLRRADFNAGAN-INTFWRMP 1328

Query: 1094 VGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDD------VDFFSHLEMHMRQ 1147
                + +  K +L         + T+ G +G +L    +         +  + +  H   
Sbjct: 1329 CRGALDASSKKALTWDNKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAG 1388

Query: 1148 EHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEE 1207
             +P      H   RS   PVK+++DG+L  ++  LS+  + ++A ++  T   IL  L E
Sbjct: 1389 LNPKAFRMLHSDRRSLQNPVKNILDGELLNKYLYLSMMERSELAKKIGTTQDIILDDLLE 1448

Query: 1208 I 1208
            I
Sbjct: 1449 I 1449



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 89/410 (21%), Positives = 151/410 (36%), Gaps = 67/410 (16%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-----------------P 43
           MY        PT +  ++  NF  +K   +VVA    L + R                  
Sbjct: 1   MYAVYRQAHTPTSVEFSVYCNFISSKEKNLVVAGTSQLFVYRIIHDVESTSKADKSSDSK 60

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S  +FG I S+A  +L G+ +D +++     ++ ++EY+P  +    +  
Sbjct: 61  SRKEKLEQVASFSLFGNIMSMASVQLVGASRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP+ R  ++     + +V    +DT      S   E 
Sbjct: 121 HYFEEPELRDGFVQNVHIPVVRVDPENRCAVMLVYGTKLVVLPFRKDTLTDEQESGVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            KS  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 PKSSFLPSYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        WS    P D    M V  P GG     V+V A N ++Y NQ  P
Sbjct: 240 IVAISLNIMQKVHPVIWSLSNLPFDCTQVMAVPKPIGG-----VVVFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRADLPAE-RGVLIVSAATHRQKTLFFFLLQTEY------------GDIFKVT 310
                 P    L ++  G          +  L     Q+++            G+I+ +T
Sbjct: 295 ------PYGVSLNSQTNGTTAFPLRVQDEVKLTLDCCQSDFIAYDKMVISLKGGEIYVLT 348

Query: 311 LEHDNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQF 357
           L  D   +  ++  +FD      +T  M  ++ GYLF  S  GN  L ++
Sbjct: 349 LITDG--MRSVRAFHFDKAAASVLTTCMVTMEPGYLFLGSRLGNSLLLKY 396


>gi|170576536|ref|XP_001893668.1| CPSF A subunit region family protein [Brugia malayi]
 gi|158600196|gb|EDP37499.1| CPSF A subunit region family protein [Brugia malayi]
          Length = 1323

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 119/579 (20%), Positives = 215/579 (37%), Gaps = 88/579 (15%)

Query: 20  GNFSGTKTPEIVVARGKVLELLRPE-------------NSGRIETLVSTEIFGAIRSLAQ 66
           G F   K  +IV    K L + R                + R+E L++  +   ++S A 
Sbjct: 20  GKFFPEKGLQIVTIGVKYLRIFRANPYALLLKDEQQWAQTTRLECLLAVRLLAPVQSFAI 79

Query: 67  FRLTGSQK-DYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG----KSGCRRIVPGQYLA 121
            R++ +   D +++G D  ++ I+  NP+      I    F     K G  + +P   + 
Sbjct: 80  ARISQNPDCDSLLLGFDDAKLSIVAVNPADRCLKTISLHCFEDELLKDGFTKNLPRPVIR 139

Query: 122 VDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIF 181
           VDP  R   +    +   V   N  +    + +  L    S  +      +D  F +  +
Sbjct: 140 VDPGQRCASMLVFGRYLAVLPFNDSSTQLHSYTVQLSQIDSRLVNV----VDMVFLDGYY 195

Query: 182 AAIELDYSEADQDSTGQAASEAQKNLTF-YELDLGLNHVSRKW---SEPVDNGANMLVTV 237
               L   E  Q + G+A             L++    ++  W   + P+D    + +  
Sbjct: 196 EPTLLFLYEPVQTTCGRACVRYDTMCVLGVSLNVKEQVLASVWQLTNLPMDCNQILAIPR 255

Query: 238 PGGGDGPSGVLVCAENFVIYKNQGHP----DVRAVIPRRADLPAE---------RGVLIV 284
           P GG     +L+ A N +IY NQ  P     + + +      P +          G ++ 
Sbjct: 256 PVGG-----ILLVATNELIYLNQSVPPCGISLNSCMDGFTKFPLKDFKHMALTLDGAVVT 310

Query: 285 SAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVS---ELKIKYFDTIPVTASMCVLKSG 341
             +T++       LL    G +F + L  D  +     ELK ++   IP T + C    G
Sbjct: 311 VVSTNK------ILLCDRNGRLFTLILVTDATNSVKSLELKFQFETVIPCTMTSCA--PG 362

Query: 342 YLFAASEFGNHALYQFQAIGADPDVEASSSTLM---------ETEEGFQ------PVFFQ 386
           YLF  S   +        I     +E S++  M         E +E F+      P   +
Sbjct: 363 YLFIGSRLCDSVF--LHCIFEQSTLEESATKKMKLSTEPNANEEDEDFELYGEVLPKVAK 420

Query: 387 PRGLKNLVRIEQVESLMPIMDMR--------IANLFEEEAPQ--IFTL---CGRGPRSSL 433
           P   + L+ I  ++ L+ +   +        ++  F+E   +  +F L   CG G   S+
Sbjct: 421 PDVTEELLNIRVLDKLLNVGPCKKITGGCPSVSAYFQEITRKDPLFDLVCACGHGKFGSI 480

Query: 434 RILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVS 493
            IL+  +    +  S + GV    W V +   D+   Y + S    TL L     + E+ 
Sbjct: 481 CILQRSIRPEIITSSSIEGV-VQYWAVGRR-EDDTHMYFIASRELGTLALETDNDLVELE 538

Query: 494 DSGFLDTTPSLAVSLIGDDSL-MQVHPSGIRHIREDGRI 531
              F  +  ++A   + D  L +QV  S +  + E  +I
Sbjct: 539 APIFSTSESTIAAGELADGGLAVQVTTSSLVMVAEGQQI 577


>gi|134077422|emb|CAK45676.1| unnamed protein product [Aspergillus niger]
          Length = 1133

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 166/826 (20%), Positives = 309/826 (37%), Gaps = 119/826 (14%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFGAI 61
           Y + + + + I  A+  +F   +   +VVA    LE+  L PE    +    S  +F  +
Sbjct: 3   YVVPIHRASSIRNALKLHFMNAEEEALVVALANRLEIYSLTPEG---LNLAASCSLFAKV 59

Query: 62  RSLAQFRL-TGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPGQY 119
             LA+      S  D++ VG+D      L ++  +N +  + +         R    G  
Sbjct: 60  TMLARLPAPANSPTDHLFVGTDRYTYCTLSWDGERNQIRTERNYVDISDPSSREAQTGNR 119

Query: 120 LAVDPKGRAVMI----GACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVY-SICGIDC 174
             +DP GR + +    G      +V + ++    ++   S  +A +   +   +   ID 
Sbjct: 120 CLIDPSGRFMTLEVYEGVIAVVPIVQLPSKKRGRQVAPPSGPDAPRVGELGEPTTARIDE 179

Query: 175 GF-----DNPIFAAIE---LDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEP 226
                  DN     ++   L YS A   +   AA E   +    ELDLG +H        
Sbjct: 180 LLALLYEDNQKKVRLKVRALHYSAATASTGADAAFEESLDGFSQELDLGASH-------- 231

Query: 227 VDNGANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVS 285
                  L+ VP     P  G+LV  E  + Y +    D   ++ R  D   E  + +  
Sbjct: 232 -------LIPVPA----PLGGLLVLGETSIKYVDT---DSNEIVSRPLD---EATIFVAW 274

Query: 286 AATHRQKTLFFFLLQTEYGDIFKVTLEHD-NEHVSELKIKYFDTIPVTASMCVLKSGYLF 344
                Q+    +LL  +YG +F + L  D N  V   K+ +       + +  L  G +F
Sbjct: 275 EQVDSQR----WLLADDYGRLFFLMLVLDSNNQVQSWKLDHLGNTARASVLIYLGGGVIF 330

Query: 345 AASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP 404
             S  G+  + +                                G  +L  I+ + ++ P
Sbjct: 331 VGSHQGDSQVLRI-------------------------------GNGSLEVIQTLSNIAP 359

Query: 405 IMDMRIANL-----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
           I+D  I +L           F     +I T  G     +LR +R G+ + E+ V     +
Sbjct: 360 ILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEMEL 419

Query: 454 PSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGF-LDTTPSLAVSLI 509
            + ++ ++      +   ++V+F + T V      GE  E  S  G  L     LA++L 
Sbjct: 420 ITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEELDSFLGLSLSENTLLAMNLP 479

Query: 510 GDDSLMQVHPSGIRHIREDGRI-NEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDM 568
           G   L       +    E G + NEW  P    I    +N   +V+ +SGG+L+   +D+
Sbjct: 480 GGRILQVTEQRVLIADIEGGMVTNEWTPPDNLVITSASANNDSIVL-VSGGQLMTV-LDI 537

Query: 569 TGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQ 628
              +  + + +   D + +   +VP     S  + +  +    ++  LD     ++ +  
Sbjct: 538 NNDVRVISQKDFGAD-SQISGVTVP---LSSAGVCIVGFPQLAKVSVLDLGRLSELHTTS 593

Query: 629 ---SVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSR 685
              +  + P S+L  +V         A+ P++LF++  + +G +     D     L+   
Sbjct: 594 LGPAGEAFPRSVLVADVL--------ANSPSTLFIS--MADGSVITYSFDARNYSLTGMN 643

Query: 686 SRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQ 744
              LG   P    +  G G   +      P L Y   GR + + ++ E       F+S+ 
Sbjct: 644 RLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSEA 703

Query: 745 CVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
               +     + L++  +++   T  +T LP+  T RR    P +K
Sbjct: 704 YPGSIAVATRHDLKIALVDKERTTQIQT-LPMGETARRVAYSPSEK 748


>gi|338728513|ref|XP_003365689.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Equus caballus]
          Length = 1450

 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 156/418 (37%), Gaps = 58/418 (13%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR------------------ 42
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEAPTKNDRNAEGK 60

Query: 43  --PENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK 100
              E+  ++E + S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    
Sbjct: 61  AHREHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKT 120

Query: 101 IHQETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSP 156
           +    F     + G  + V    + VDP GR   +     + +V    R++ A       
Sbjct: 121 LSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLM 180

Query: 157 LEAHKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
            E  +S  +   I             +D  F +  +    L   E +Q   G+ A   Q 
Sbjct: 181 GEGQRSSFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QD 239

Query: 206 NLTFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
             +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ
Sbjct: 240 TCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQ 294

Query: 261 GHPDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEH 313
             P     +           L  + GV I +  A     +    ++  + G+I+ +TL  
Sbjct: 295 SVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLIT 354

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
           D   +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 355 DG--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 410



 Score = 41.2 bits (95), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 507 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEQEETPKGEGTEQ 565

Query: 470 --------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  +
Sbjct: 566 EPSAPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYI 625

Query: 515 MQVHPSGIR 523
           +QV P GIR
Sbjct: 626 VQVSPLGIR 634


>gi|58702050|gb|AAH90169.1| LOC564406 protein, partial [Danio rerio]
          Length = 416

 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 154/410 (37%), Gaps = 67/410 (16%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-----------------P 43
           MY        PT +  A+  NF  ++   +VVA    L + R                  
Sbjct: 1   MYAVYRQAHPPTAVEFAVYCNFISSQEKNLVVAGTSQLYVYRIIYDVESTSKSEKSSDGK 60

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S  +FG + S+A  +L G+ +D +++     ++ ++EY+P  +    +  
Sbjct: 61  SRKEKLEQVASFSLFGNVMSMASVQLVGTNRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGR-AVMI--GACEKQKLVYVLNRDTAARLTISSP 156
             F     + G  + V    + VDP+ R AVM+  G C    +V    +DT A       
Sbjct: 121 HYFEEPELRDGFVQNVHIPMVRVDPENRCAVMLVYGTC---LVVLPFRKDTLADEQEGIV 177

Query: 157 LEAHKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
            E  KS  +   I             ID  F +  +    L   E +Q   G+ A   Q 
Sbjct: 178 GEGQKSSFLPSYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVR-QD 236

Query: 206 NLTFYELDLGLNHVSRK--WS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
             +   + L +        WS    P D    M V  P G     GV+V A N ++Y NQ
Sbjct: 237 TCSIVAISLNIMQKVHPVIWSLSNLPFDCNQVMAVPKPIG-----GVVVFAVNSLLYLNQ 291

Query: 261 GHPDV----------RAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVT 310
             P                P R   P E   + +  +     T    ++  + G+I+ +T
Sbjct: 292 SVPPFGVSLNSLTNGTTAFPLR---PQEEVKITLDCSQASFITSDKMVISLKGGEIYVLT 348

Query: 311 LEHDNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQF 357
           L  D   +  ++  +FD      +T  M  ++ GYLF  S  GN  L ++
Sbjct: 349 LITDG--MRSVRAFHFDKAAASVLTTCMMTMEPGYLFLGSRLGNSLLLRY 396


>gi|315039795|ref|XP_003169275.1| hypothetical protein MGYG_08821 [Arthroderma gypseum CBS 118893]
 gi|311337696|gb|EFQ96898.1| hypothetical protein MGYG_08821 [Arthroderma gypseum CBS 118893]
          Length = 1076

 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 179/836 (21%), Positives = 321/836 (38%), Gaps = 132/836 (15%)

Query: 414  FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIV 473
            F     +I T  G     SLR +R G+ + ++ V       + +W ++    + F   ++
Sbjct: 330  FSSGQTRIVTGSGAFGDGSLRSVRSGVGIEDLGVLASMEHITDLWGLRSACPEPFYDTLL 389

Query: 474  VSFNNATLVLSI---GETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIRHIRED 528
            VSF N T V      GE VEE  D   G + +  +L  + I ++ ++QV  S  + I  D
Sbjct: 390  VSFVNETRVFHFSPDGE-VEEKEDDFLGLVFSRSTLLATNIPENRILQVTESTAKVIDLD 448

Query: 529  GRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLD 588
              +  W++    +I    +N   +V+ L G  L+   +  T + +     E+   V+ + 
Sbjct: 449  SGMVIWQSSHNESITSASANDDYLVLVLGGIRLVCISLS-TFEQVGSRDFEVDNQVSGMT 507

Query: 589  IASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGG 648
            I + P          +     +  I+ LD    +++ + Q++  P E++     ++ +  
Sbjct: 508  IPASPIQA------CIVCLPQSAEIVILDLPG-LEVKNKQALGEPGEAI----PRSVIVA 556

Query: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVG-GRAAM 707
            E  A  P +LF++  + +G +F    D+ T  +S S    LG   P    +  G G+  +
Sbjct: 557  EILAGKPPTLFVS--MADGTVFSFSFDINTFTISGSSKITLGSEQPSFKKLPRGNGQYNV 614

Query: 708  LCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAG-NALRVFTIERLG 766
                  P L +   GR + + +   +     S ++ Q   G ++++  N L++  ++   
Sbjct: 615  FATCDHPSLIHASEGRIVYSAVDSASSSRICSLNT-QAYPGSIALSNQNELKIALVDEER 673

Query: 767  ETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
             T   T LP+  + RR    P +K                          A G+G     
Sbjct: 674  TTQIHT-LPMHASVRRLAYSPLEK--------------------------AFGLGTVKR- 705

Query: 827  NMDQMENGDDE-NKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAF 885
                + NG +E +    L+DE +  P +  D        L P      C++  Q      
Sbjct: 706  ---TISNGVEEVSSSFVLADEIHFRPLSTYD--------LRPDEL-VECVIRSQ------ 747

Query: 886  SICTVNFHDKEHGTLLA-----VGTAKGLQFWPK--RNIVAGYIHIYRFVEEGKSLELLH 938
                VN    E G L++     VGTA    F      + + G I I+  V + + L L+ 
Sbjct: 748  ----VNCGKDEVGNLMSKDLFFVGTA----FLDDVGDDHIRGRILIFE-VNKSRELSLIV 798

Query: 939  KTQVEGIPLALCQFQGRLL-AGIGPVLRLYDLGKKR----LLRKCENKLFPNTIVSINTY 993
               + G    L      LL AG+   + ++ L + R     L K          + I+  
Sbjct: 799  DKSLMGACRTLAVMDPSLLVAGLVKSVSVFKLARDRFGNIFLEKHTAYRTSTAPIDISVT 858

Query: 994  RDRIYVGDIQESFHFCKY---RRDENQLYI--FADDSVPRWLTAAHHIDFDTMAGADKFG 1048
             D + V D+ +S    +Y    +DE +      A      W TA   I+      AD  G
Sbjct: 859  GDTVAVADVMKSMSLVQYTPAEKDEQEPKFEEIARHYQTLWSTAVTLIEEHVYLLADAEG 918

Query: 1049 NIYFVRLPQDVSDEIEED-----PTGGKIKWEQGKLNGAPNKMEEI-VQFHVGDVVTSLQ 1102
            N+  V L Q+ +   E D     PT       + +L    N++  I VQ H    V++  
Sbjct: 919  NL--VVLQQNTTGVTESDRKRLQPTS------EIRLGEMVNRIHPITVQTHTETAVSA-- 968

Query: 1103 KASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRS 1162
            +A L    G   ++G +  +            +D    L+  M              YR+
Sbjct: 969  RALLATVDGSIYLFGLINPAY-----------IDLLLRLQTAMASITVSPGEIPFSKYRA 1017

Query: 1163 AYFPVKD------VIDGDLCEQFPTLSLDLQRKIADELDR---TPGEILKKLEEIR 1209
                V+        +DG+L E+F + +  +Q +IA+ LD    T   + + +EE+R
Sbjct: 1018 FRTTVRQSDEPFRFVDGELIERFLSCTPTMQEEIANRLDDSNVTVSSLKEMIEELR 1073


>gi|239613967|gb|EEQ90954.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis ER-3]
 gi|327353314|gb|EGE82171.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis ATCC
           18188]
          Length = 1199

 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 117/543 (21%), Positives = 206/543 (37%), Gaps = 86/543 (15%)

Query: 225 EPVDNGANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLI 283
           E ++ GA+ LV VP     P  G+LV  E  + Y +    +           P E   + 
Sbjct: 290 EELEMGASFLVPVPA----PLGGLLVLGETSIRYLDDASNEC-------ISQPLEEATIF 338

Query: 284 VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKSGY 342
           V+     Q     +LL  +YG +F + L  D+++ V   K+     IP  + +  +  G 
Sbjct: 339 VA---WEQVDGQRWLLADDYGRLFFLMLILDSDNAVQSWKLDRLGNIPRASVLVYMGGGV 395

Query: 343 LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            F  S  G+  L +                   TE  F+              I+   ++
Sbjct: 396 TFIGSHQGDSQLIRI------------------TEGSFEV-------------IQTFANI 424

Query: 403 MPIMDMRIANL------------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
            PI+D  I +L            F     +I T  G     SLR +R G+ + E+ V   
Sbjct: 425 APILDFTIMDLGGRAMGESQTHEFSSGQARIVTGSGAFNDGSLRSVRSGVGMEEVGVLGS 484

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTTPSLAVS 507
               + +W ++    +EF   ++VSF + T V      G   E+    G   T  +L  +
Sbjct: 485 MEHITDLWALRVACPEEFSDTLLVSFVDETRVFYFTPDGGVEEKDEFMGLGLTESTLIAA 544

Query: 508 LIGDDSLMQVHPSGIRHIREDGRIN--EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE 565
            + +  ++QV    +R    DG +   EW    ++ I    SN   +V+ + G  L+ F 
Sbjct: 545 NLPNGRILQVTERNVRVAELDGGMVMWEWSPVSQKAITAASSNDDHLVLMVGGQVLMIF- 603

Query: 566 VDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL 625
            D+ G++    + +   D     + +V     RS  L +      I ++SL     + I 
Sbjct: 604 -DIRGEIKVAGEKDFGVDTQVSGV-TVTASPARSCILCLPQTAEVI-VMSLAD---LTIR 657

Query: 626 SVQSVSSP----PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL 681
              S+  P    P S+L  EV          ++PA+LF++  + +G +F    +     L
Sbjct: 658 HSTSLGEPGDAVPRSVLVAEVL--------PNNPATLFVS--MADGSVFSFSFNATDFSL 707

Query: 682 SDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF 740
           +      LG   P    +  G G   +     +P L Y   GR + + ++ +       F
Sbjct: 708 TSMSKITLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYSAEGRIVYSAVNSDQASRICHF 767

Query: 741 SSD 743
           +S+
Sbjct: 768 NSE 770


>gi|1045574|gb|AAC50293.1| cleavage and polyadenylation specificity factor [Homo sapiens]
          Length = 1442

 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 136/353 (38%), Gaps = 42/353 (11%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +    F 
Sbjct: 65  KLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFE 124

Query: 108 ----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSH 163
               + G  + V    + VDP GR   +     + +V    R++ A        E  +S 
Sbjct: 125 EPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSS 184

Query: 164 TIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYEL 212
            +   I             ID  F +  +    L   E +Q   G+ A   Q   +   +
Sbjct: 185 FLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCSIVAI 243

Query: 213 DLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRA 267
            L +        W   S P D    + V  P G     GV+V A N ++Y NQ  P    
Sbjct: 244 SLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSVPPYGV 298

Query: 268 VIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEHDNEHV 318
            +           L  + GV I       Q T   +   ++  + G+I+ +TL  D   +
Sbjct: 299 ALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLITDG--M 354

Query: 319 SELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
             ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 355 RSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 407



 Score = 41.2 bits (95), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 27/130 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 499 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEDNPKGEGTEQ 557

Query: 470 ---------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS- 513
                           ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  
Sbjct: 558 EPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRY 617

Query: 514 LMQVHPSGIR 523
           ++QV P GIR
Sbjct: 618 IVQVSPLGIR 627


>gi|325094412|gb|EGC47722.1| DNA damage-binding protein 1a [Ajellomyces capsulatus H88]
          Length = 1201

 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 115/543 (21%), Positives = 206/543 (37%), Gaps = 86/543 (15%)

Query: 225 EPVDNGANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLI 283
           E ++ GA+ LV VP     P  G+LV  E  + Y +    +  +   + A       + +
Sbjct: 292 EELEMGASFLVPVPA----PLGGLLVLGETSIRYLDDASNECISQPLKEAT------IFV 341

Query: 284 VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKSGY 342
                  Q+    +LL  +YG +F + L  D ++ V   K+     IP  + +  +  G 
Sbjct: 342 AWEQVDGQR----WLLADDYGRLFFLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGGGI 397

Query: 343 LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            F  S  G+  L +                   TE  F+              I+   ++
Sbjct: 398 TFIGSHQGDSELIRI------------------TEGSFEV-------------IQTFANI 426

Query: 403 MPIMDMRIANL------------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
            PI+D  I +L            F     +I T  G     SLR +R G+ + E+ V   
Sbjct: 427 APILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRSVRSGVGMEEVGVLGA 486

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTTPSLAVS 507
               + +W ++     EF   ++VSF + T V      GE  E+    G      +L  +
Sbjct: 487 MKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGEVEEKEEFMGLGLAESTLLAA 546

Query: 508 LIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE 565
            +    ++QV    +R    DG   I EW    ++ I    SN   VV+ + G  L+ F+
Sbjct: 547 NLPHGRILQVTEWNVRVAELDGGMVIWEWSPEQQKAITAASSNDDHVVLMVGGQVLMIFD 606

Query: 566 VDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL 625
           +     +   +   +   V+ + + + P    R+  L +      + ++SL PD  + I 
Sbjct: 607 ISGDINITGEKDFGVDTQVSGVTVTTSP---ARACILCLPQTAEVV-VMSL-PD--LAIR 659

Query: 626 SVQSVSSP----PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL 681
              S+  P    P S+L  EV          ++PA+LF++  + +G +F    +     L
Sbjct: 660 RSTSLGEPGDAVPRSVLVAEVL--------PNNPATLFVS--MADGSVFSFSFNSEDFSL 709

Query: 682 SDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF 740
           +      LG   P    +  G G   +     +P L Y   GR + + ++ +       F
Sbjct: 710 TSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYAVEGRIVYSAVNSDQASRICHF 769

Query: 741 SSD 743
           +S+
Sbjct: 770 NSE 772


>gi|347838030|emb|CCD52602.1| similar to DDB1B (Damaged DNA Binding protein 1 B); damaged DNA
           binding / protein binding [Botryotinia fuckeliana]
          Length = 1157

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 172/847 (20%), Positives = 311/847 (36%), Gaps = 135/847 (15%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   + +P+ +   +  N    +   +V+A+   LE+ R    G +    S  I+G I  
Sbjct: 3   YLAPIHRPSSVRLTLRLNLLDHREECLVLAKANRLEIWRATEDG-LTMAYSKSIYGRISM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDK------IHQETFGKSGCRRIVPG 117
           L + +  GS+ D++ VG+   +   + +NP  +  D       + QE    S  R     
Sbjct: 62  LQKIQPAGSKTDHLFVGTVRAQYFTVMWNPQTHKLDTMQSFVDVSQEHMRDSESR----- 116

Query: 118 QYLAVDPKGRAVMIGACEK-QKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGF 176
               VDP GR +++   E    LV ++         + +P +   S   V +   +    
Sbjct: 117 DRCLVDPTGRLLVMELYEGVLNLVKIVKPRGGKTDYLENPEQVRISEMKVRASAFLYTDT 176

Query: 177 DNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELD----LGLNHVSRKWSE-PVDN-- 229
             P  A +  D            A E  K  T+  LD    L L    +K  E  VD+  
Sbjct: 177 KQPKLALLYQD------------ARENVKLATYRMLDDKGQLILQFDPKKNRENDVDDLC 224

Query: 230 -GANMLVTVPGGGDGPS----------------GVLVCAENFVIYKNQGHPDVRAVIPRR 272
            GA  ++ VP   D  S                G++V  E    Y +    + +A++   
Sbjct: 225 VGAMHIIPVPKARDEASKRYIVRNATTAKANLGGLVVLGETKFTYLDD---ESKAIVEYA 281

Query: 273 ADLPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVT 332
            D      VL  +     ++T   +LL  +YG ++ +T+  D   V+ L++     +   
Sbjct: 282 LD----EAVLWAAWEPIDERT---YLLGDDYGFLYILTILVDGATVTGLQVVKLGQVSKP 334

Query: 333 ASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKN 392
            S+  L +G  + AS   ++     Q +  D +      TL++T     P+         
Sbjct: 335 TSLENLGNGVFYIASHEADN-----QVVQIDLESPEHGVTLLQTLPNIAPILD------- 382

Query: 393 LVRIEQVESLMPIMDM------RIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMA 446
                       +MDM         N +     ++ T  G     SLR +R G+ + + A
Sbjct: 383 ----------FTVMDMGGREGETQLNEYSSGQARLVTGSGGFEGGSLRSVRSGVGLDDTA 432

Query: 447 V-SQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGET--VEEVSDSGFLDTTP- 502
           + +++ G+   V+ +        D  +VVSF+  T          +EEV     L +T  
Sbjct: 433 ILAEMEGI-RKVFALHSGPTLPNDT-LVVSFSTETRFFKFDTQGDIEEVETVKNLSSTSE 490

Query: 503 SLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI 562
           +L    + +  ++QV    +  I      + W+ P  + I     N+  ++++ +G  L 
Sbjct: 491 TLLTYNLDEGCILQVTQHEV-SIYGKSPGHRWQPPNGQIITAASGNQNYILLSSNGRTL- 548

Query: 563 YFEVDMTGQLLEVEKHEMSGD-VACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDC 621
            F + +   L EV   E+  D VAC+ +  V                  I ++ L     
Sbjct: 549 -FTLSIQQNLAEVAFQELGDDQVACIHVPQVM---------------GDIGVVGLWKSGS 592

Query: 622 MQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLN-------------AGLQNGV 668
           + +L + ++++         V   +   DGA  P  + L                +++G+
Sbjct: 593 VSLLDLATLNTI--------VSEDLRRADGASIPRDIALTQILPPELSGPTLFVSMEDGI 644

Query: 669 LFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA-AMLCLSSRPWLGYIHRGRFLLT 727
           +    VD     LS  +S  LG +  +L  +        +      P L Y   GR + +
Sbjct: 645 VLSFNVDKSDCSLSGRKSIVLGTQQAQLQILPRDNTTFNVFATCEHPSLIYGSEGRTVYS 704

Query: 728 PLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQP 787
            ++ E      S +S      VV    N L++  I+    T   T LP+  T RR     
Sbjct: 705 AVTAEDAIAVCSLNSVAYPGSVVVATINELKLAVIDNERRTHVRT-LPIGETVRRVAYSA 763

Query: 788 KKKLMVI 794
           K+K   I
Sbjct: 764 KEKSFAI 770


>gi|261193401|ref|XP_002623106.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis SLH14081]
 gi|239588711|gb|EEQ71354.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis SLH14081]
          Length = 1168

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 117/543 (21%), Positives = 206/543 (37%), Gaps = 86/543 (15%)

Query: 225 EPVDNGANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLI 283
           E ++ GA+ LV VP     P  G+LV  E  + Y +    +           P E   + 
Sbjct: 290 EELEMGASFLVPVPA----PLGGLLVLGETSIRYLDDASNEC-------ISQPLEEATIF 338

Query: 284 VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKSGY 342
           V+     Q     +LL  +YG +F + L  D+++ V   K+     IP  + +  +  G 
Sbjct: 339 VA---WEQVDGQRWLLADDYGRLFFLMLILDSDNAVQSWKLDRLGNIPRASVLVYMGGGV 395

Query: 343 LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            F  S  G+  L +                   TE  F+              I+   ++
Sbjct: 396 TFIGSHQGDSQLIRI------------------TEGSFEV-------------IQTFANI 424

Query: 403 MPIMDMRIANL------------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
            PI+D  I +L            F     +I T  G     SLR +R G+ + E+ V   
Sbjct: 425 APILDFTIMDLGGRAMGESQTHEFSSGQARIVTGSGAFNDGSLRSVRSGVGMEEVGVLGS 484

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTTPSLAVS 507
               + +W ++    +EF   ++VSF + T V      G   E+    G   T  +L  +
Sbjct: 485 MEHITDLWALRVACPEEFSDTLLVSFVDETRVFYFTPDGGVEEKDEFMGLGLTESTLIAA 544

Query: 508 LIGDDSLMQVHPSGIRHIREDGRIN--EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE 565
            + +  ++QV    +R    DG +   EW    ++ I    SN   +V+ + G  L+ F 
Sbjct: 545 NLPNGRILQVTERNVRVAELDGGMVMWEWSPVSQKAITAASSNDDHLVLMVGGQVLMIF- 603

Query: 566 VDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL 625
            D+ G++    + +   D     + +V     RS  L +      I ++SL     + I 
Sbjct: 604 -DIRGEIKVAGEKDFGVDTQVSGV-TVTASPARSCILCLPQTAEVI-VMSLAD---LTIR 657

Query: 626 SVQSVSSP----PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL 681
              S+  P    P S+L  EV          ++PA+LF++  + +G +F    +     L
Sbjct: 658 HSTSLGEPGDAVPRSVLVAEVL--------PNNPATLFVS--MADGSVFSFSFNATDFSL 707

Query: 682 SDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF 740
           +      LG   P    +  G G   +     +P L Y   GR + + ++ +       F
Sbjct: 708 TSMSKITLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYSAEGRIVYSAVNSDQASRICHF 767

Query: 741 SSD 743
           +S+
Sbjct: 768 NSE 770


>gi|55725165|emb|CAH89449.1| hypothetical protein [Pongo abelii]
          Length = 565

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 154/418 (36%), Gaps = 61/418 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICGIDCGFDNPIFAAIELDY------------SEADQDSTGQAASEAQKNL 207
            +S  +   I  +    D  +   I+L +             E +Q   G+ A   Q   
Sbjct: 181 QRSSFLPSYIIDVR-ALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 238

Query: 208 TFYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  
Sbjct: 239 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSV 293

Query: 263 PDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEH 313
           P     +           L  + GV I       Q T   +   ++  + G+I+ +TL  
Sbjct: 294 PPYGVALNSLTTGTTAFPLRTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLIT 351

Query: 314 DNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
           D   +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 352 DG--MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 407


>gi|71663721|ref|XP_818850.1| damage-specific DNA binding protein [Trypanosoma cruzi strain CL
            Brener]
 gi|70884123|gb|EAN96999.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
          Length = 774

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 130/368 (35%), Gaps = 81/368 (22%)

Query: 891  NFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRFVEEGK------SLELLHKTQVEG 944
            N  DK+   LL    A     +P   +      I+  VE+GK       L  +    VEG
Sbjct: 347  NEADKDKAILLGTTFA-----FPDEQLPRSSRFIWYSVEQGKLISERPQLRQIGSKDVEG 401

Query: 945  IPLALC---QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVS-----INTYRDR 996
                 C    + GR+  GI   + LY       +   E  +   TIV+            
Sbjct: 402  ALQCCCIVPNYVGRIALGINGCIALYSWNAADSVFVAEETICIGTIVTRVLPIFQGDASY 461

Query: 997  IYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD-KFGNIYFVRL 1055
            +   D + S  F +    +  L I A DS PR            M G   + GNIY +  
Sbjct: 462  MVAFDARHSCFFIQVDTFQGSLEIVARDSEPR----------GVMDGTVFQLGNIYNICF 511

Query: 1056 PQDVSDEIEEDPTGGKIKWEQGKLNG--APNKMEEIVQFHVGDVVTSLQKAS-------- 1105
              D  +          +       +   +  K+E   Q+H+GD+VT++Q  S        
Sbjct: 512  GDDYYNFFCLSRGASTLPSASNATSATVSSGKLETSAQYHLGDMVTAMQLGSFAPCSVTN 571

Query: 1106 --------LVPG-GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRD 1156
                    L+PG  G  V++GT  G+ G +   S+   +     LE+ +    P L G +
Sbjct: 572  IAVPIPTTLIPGICGPQVVFGTSHGAFGTITPVSNETYL-LLKALEVAVSSVVPALGGFE 630

Query: 1157 HMAY-------------RSAYFPVKDVI------------------DGDLCEQFPTLSLD 1185
            H+ Y             R+A F   +V+                   GDL E F T S  
Sbjct: 631  HVTYREVLRAGQERGYSRNASFENANVVSSGVFDKRRKRYLSRCVCSGDLIESFLTFSQT 690

Query: 1186 LQRKIADE 1193
            +Q++I  E
Sbjct: 691  IQQRILRE 698


>gi|405977622|gb|EKC42064.1| Cleavage and polyadenylation specificity factor subunit 1
           [Crassostrea gigas]
          Length = 1369

 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 121/607 (19%), Positives = 228/607 (37%), Gaps = 101/607 (16%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           ++E L +  +FG I S+   +L G+ +D +++     ++ ++EY+P  +         F 
Sbjct: 4   KMECLATFTLFGNIMSMKYVKLPGALRDSLLLSFSEAKLSVVEYDPGTHDLQTTSLHFFE 63

Query: 108 KSGCRRIVPGQY----LAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSH 163
           +   +      Y    + VDP GR   +       ++    RD            A  S 
Sbjct: 64  EPSMKGGFFTNYCIPEVRVDPDGRCAAMLVYGTHMVILPFRRDVMVE---EGDNLAGTSK 120

Query: 164 TIVYSICGIDC-GFDNPIFAAIELDY------------SEADQDSTGQAASEAQK-NLTF 209
           + + S   ID   FD  I    +  +             E  Q   G+ A  A   ++  
Sbjct: 121 SPILSSYIIDLRNFDEKIINVKDFQFLHGYYEPTVFILFEPLQTWAGRTAVRADTCSIVA 180

Query: 210 YELDLGLNHVSRKWSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP--- 263
             L+L        WS    P D    + V  P GG     V++ A N ++Y NQ  P   
Sbjct: 181 ISLNLQEKVHPVIWSLGSLPFDCCQVLAVPRPIGG-----VIIIAVNSLLYLNQSVPPYG 235

Query: 264 -DVRAVIPRRADLP--AERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEHDN-E 316
             + ++  +    P   + GV I  A    Q     +   +L  + G+++ +TL  D   
Sbjct: 236 VSLNSISAQSTLFPLRVQEGVRI--ALDCCQAAFMSYDKIVLSLKGGELYVLTLVVDGMR 293

Query: 317 HVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGA--------DPDVEA 368
            V            +T+ MC+ + G+LF  S  GN  L ++    +        D   E 
Sbjct: 294 SVRSFNFDKSAASVLTSCMCICEDGFLFLGSRLGNSLLLKYTEKASECLENGDLDKKKED 353

Query: 369 SSSTLMETEEGFQPVFFQPRGLKNLVRIE----------------------QVESLMPIM 406
             +   +  EG   +      ++NL  +E                       + ++ P  
Sbjct: 354 EPAAKKKKVEGSTEIASDVSQIENLYDLEVYGSAENPTSTTITSYTFEVCDNIWNIGPCG 413

Query: 407 DMRI---ANLFEE----EAPQI--FTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAV 457
           ++ +   A L EE    E P I      G G   +L +L+  +    +   +LPG    +
Sbjct: 414 NIVMGEPAFLSEEFSSCEDPDIEMVMTSGYGKNGALSVLQRSIRPQVVTTFELPGCLD-M 472

Query: 458 WTVK------------KNVNDEFD-------AYIVVSFNNATLVLSIGETVEEVSDSGF- 497
           WTVK             ++ D+ D       +++++S ++++++L  G+ + E+  SGF 
Sbjct: 473 WTVKSLVPKEKSEDKENSMEDDSDDNIEGGHSFLILSRSDSSMILETGQEMNELDHSGFS 532

Query: 498 LDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALS 557
             TT   A ++ GD  ++QV  + +R +    +I          +V+       +V+   
Sbjct: 533 TQTTTIFAGNIGGDRYIVQVSDTSLRLLEGVRQIQHIPLDTGSPVVQCSLADPYIVLLTQ 592

Query: 558 GGELIYF 564
            G+++ F
Sbjct: 593 EGQILMF 599



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 122/288 (42%), Gaps = 23/288 (7%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC--ENKLFPNTIVSIN 991
            ++ L++ + +G   AL    G L+  IG  L ++ L    L+     +  ++ +T+V+I 
Sbjct: 1085 IKTLYEKEQKGPVTALADINGLLITAIGQKLYIWQLKDNDLMGVAFIDTHIYIHTLVTI- 1143

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVP-RWLTAAHHIDFDTMAG--ADKFG 1048
              +  I  GDI +S    +Y+ +   L I + D  P    TA   ID   +    +D+  
Sbjct: 1144 --KHIILAGDILKSVSVYQYQEEHKVLSIVSRDPRPLEVYTADFLIDNTQLCCLVSDRMK 1201

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEI-VQFHVGDVVTSLQKASLV 1107
            N+       +  +       GG+    +   N   N      V+  + D  +S ++ +  
Sbjct: 1202 NLVVYSYQPEARES-----HGGQRLIRKADFNAGSNVSSMFRVRCKLYDP-SSDKRMTGA 1255

Query: 1108 PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY--- 1164
            P       + T+ GSLG +L  S +     F  L+  +    P + G +  +YR      
Sbjct: 1256 PEKRHITYFATLDGSLGFVLPLSEKVYRRLF-MLQNALVTHIPHVAGLNPRSYRHVIGTF 1314

Query: 1165 ----FPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
                 P K+++DG+L  ++  LS+  + +IA  L  +  +I+  L EI
Sbjct: 1315 PELRNPQKNILDGELLWKYTNLSIMEKIEIAKRLGTSNDQIMDDLMEI 1362


>gi|196012166|ref|XP_002115946.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
 gi|190581722|gb|EDV21798.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
          Length = 1187

 Score = 54.3 bits (129), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 15/191 (7%)

Query: 395 RIEQVESLMPIMDMRIANLFEEEAPQIFTLC-GRGPRSSLRILRPGLAVSEMAVSQLPGV 453
           RI  V     I   +I+   +EE+     +C G     +L +L  G+    +A   LPG 
Sbjct: 383 RILHVGPCASIAIGQISTFVQEESDVEVVICSGHDKNGALSVLNKGIKPQVVASYDLPGC 442

Query: 454 PSAVWTVKK-NVNDEFDA---------YIVVSFNNATLVLSIGETVEEVSDSGFLDTTPS 503
              +WTVK   +NDE D          ++++S +N T++L  G+ + EV   GFL  T +
Sbjct: 443 VD-MWTVKDIRLNDENDGDFETENTHKFLIISRDNLTMILRTGKEITEVEQLGFLTQTKT 501

Query: 504 L-AVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI 562
           + A +L   + ++QV P  +  + +  +I +     +  IV        + + L GG ++
Sbjct: 502 VFAGNLDNGNCIIQVTPYEVILVSKGEKIQQLELENESPIVFCSLQDPYISLLLEGGSIM 561

Query: 563 Y--FEVDMTGQ 571
              FE+   G+
Sbjct: 562 MLAFELSDNGE 572


>gi|432883539|ref|XP_004074300.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Oryzias latipes]
          Length = 1456

 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 86/404 (21%), Positives = 152/404 (37%), Gaps = 55/404 (13%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-----------------P 43
           MY        PT +  ++  NF  ++   +VVA    L + R                  
Sbjct: 1   MYAVYRQAHTPTAVEFSVYCNFISSREKNLVVAGTSQLFVYRIIHDVESTSSSDKSSDAK 60

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S  +FG + S+A  +LTG+ KD +++     ++ ++EY+P  +    +  
Sbjct: 61  TRKEKLEQVASFSLFGNVMSMASVQLTGASKDALLLSFKDAKLSVIEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP+ R  ++     + +V    +DT +        E 
Sbjct: 121 HYFEEPELRDGFFQNVHIPIVRVDPENRCAVMLIYGTKLVVLPFRKDTLSDEQEGGVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            KS  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 PKSSFLPSYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--WS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        WS    P D    M V  P G     GV+V A N ++Y NQ  P
Sbjct: 240 IVAISLNIMQKVHPVIWSLSNLPFDCTQVMAVPKPIG-----GVVVFAVNSLLYLNQSVP 294

Query: 264 DVRAVIPRRAD------LPAERGVLIVSAATHRQKTLF-FFLLQTEYGDIFKVTLEHDNE 316
                +  + +      L  +  V I           +   ++  + G+I+ +TL  D  
Sbjct: 295 PYGVSLNSQTNGTTSFPLRVQEEVKITLDCCQSDFIAYDKMVISLKGGEIYVLTLITDG- 353

Query: 317 HVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQF 357
            +  ++  +FD      +T  M  ++ GYLF  S  GN  L ++
Sbjct: 354 -MRSVRAFHFDKAAASVLTTCMVTMEPGYLFLGSRLGNSLLLKY 396



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 102/538 (18%), Positives = 211/538 (39%), Gaps = 57/538 (10%)

Query: 695  KLFSVVVGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYE-TLEYAASFSSDQCVEGVVSVA 753
            + F  + G     +C  S  W+    RG   L P++ +  +E  + F +  C +G +   
Sbjct: 945  RYFEDISGYSGVFICGPSPHWMLITSRGGLRLHPMTIDGPIESFSPFHNINCPKGFLYFN 1004

Query: 754  GNA-LRVF---TIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREA 809
                LR+    T       +    +PLR T        + K+  +  + +   T   R  
Sbjct: 1005 KQGELRISVLPTYLSYDAPWPVRKIPLRCTVHFVSYHVESKVYAVCTSVKELCTRIPRMT 1064

Query: 810  AKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDKW--VSCIRVLDP 867
             +++ FE     E     ++ ++         P+S E     + + ++W  V+C++ +  
Sbjct: 1065 GEEKEFETI---ERDERYINPLQEKFSIQLISPVSWETIPNTRIDLEEWEHVTCMKTVAL 1121

Query: 868  RSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNIVAGYIHIYRF 927
            RS  T   L+      A   C +   +          T +G      R ++   I +   
Sbjct: 1122 RSQETVSGLK---GYIAAGTCVLQGEEV---------TCRG------RILILDVIEV--V 1161

Query: 928  VEEGKSL-----ELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL--LRKCEN 980
             E G+ L     ++L++ + +G   ALC   G L++ IG  + L+ L    L  +   + 
Sbjct: 1162 PEPGQPLTKNKFKVLYEKEQKGPVTALCHCHGYLVSAIGQKIFLWALKDNDLTGMAFIDT 1221

Query: 981  KLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDT 1040
            +L+ + ++SI  +   I   D+ +S    +Y+ +   L + + D+ P  + +   I  + 
Sbjct: 1222 QLYIHQMISIKNF---ILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSIEFIVDNN 1278

Query: 1041 MAG---ADKFGNIY-FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGD 1096
              G   +D+  N++ ++ LP+       ++  GG     +   N   + +  + +     
Sbjct: 1279 QLGFLVSDRDKNLFVYMYLPE------AKESFGGMRLLRRADFNAGAH-INSLWRMPCRG 1331

Query: 1097 VVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDD------VDFFSHLEMHMRQEHP 1150
             + S  K +L         + T+ G +G +L    +         +  + +  H    +P
Sbjct: 1332 ALDSGSKKALTWDNKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNP 1391

Query: 1151 PLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
                  H   RS    VK+++DG+L  ++  LS   + ++A ++  T   IL  L EI
Sbjct: 1392 KAFRMMHSNRRSLQNAVKNILDGELLAKYLYLSTMERSELAKKIGTTQDIILDDLLEI 1449


>gi|123415486|ref|XP_001304700.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121886170|gb|EAX91770.1| hypothetical protein TVAG_317590 [Trichomonas vaginalis G3]
          Length = 1075

 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 36/221 (16%)

Query: 987  IVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADK 1046
            I  + T  D I VGD   S  F KY  +   L I   D   R +T+       ++ G D+
Sbjct: 851  IDQLTTNDDIIIVGDCSSSVTFIKYVTESRSLQIIGRDYSTRSITSLKPALPHSVCGGDR 910

Query: 1047 FGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASL 1106
            FGN+++  L Q+++              ++  LN + N       +++GD++T       
Sbjct: 911  FGNVFYFEL-QNIT--------------QKKNLNLSMN-------YNIGDIITG---TCF 945

Query: 1107 VPGGGESVIYGTVMGSLGAMLAFSS-RDDVDFFSHLEMHM------RQE----HPPLCGR 1155
                   + Y T+ G LGA++   S + D ++ S +   M      +Q+       L   
Sbjct: 946  TCDNNHCIRYSTISGKLGAIIQLGSLQKDREWVSSMNEKMTVLQLVQQKTSWMFASLTNC 1005

Query: 1156 DHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDR 1196
                + +  FP  DV+D D+ + F  ++   Q ++ + L R
Sbjct: 1006 FEYEFHNKQFPSGDVLDLDIIDIFLNMAFPKQVQVLESLSR 1046


>gi|121699866|ref|XP_001268198.1| UV-damaged DNA binding protein, putative [Aspergillus clavatus NRRL
            1]
 gi|119396340|gb|EAW06772.1| UV-damaged DNA binding protein, putative [Aspergillus clavatus NRRL
            1]
          Length = 1140

 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 244/1277 (19%), Positives = 457/1277 (35%), Gaps = 213/1277 (16%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y + + + + I  A+  NF   +   +VVA+   LE   P   G +  + S   +  +  
Sbjct: 3    YVVPIHRASSIRHALKLNFVNPEEDCLVVAKSNRLEFYVPTPDG-LNLVTSCAAYARVTM 61

Query: 64   LAQFRL-TGSQKDYIVVGSDSGRIVILEYNPSKN-VFDKIHQETFGKSGCRRIVPGQYLA 121
            LA+      S  D++ VG+D      L ++ SKN V  +           R    G    
Sbjct: 62   LARLPAPANSPTDHLFVGTDRYTYFTLSWDSSKNQVRTEREYVDISDPSSRESQTGNRCL 121

Query: 122  VDPKGRAVMI----GACEKQKLVYVLNRDTAARLTISS------------PLEAHKSHTI 165
            +DP GR + +    G      ++ + ++     + + S            P  A      
Sbjct: 122  IDPSGRFMTLEIYEGVIAVVPIIQLPSKKRGRNVALPSGPDAPRVGELGEPATARIEELF 181

Query: 166  VYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSE 225
            V S   +      P  A +     E +Q        E Q    ++      N     + E
Sbjct: 182  VRSSAFLHVQEGLPRLALL----YEDNQKKVRLRVRELQ----YHAATGSTNIADATFGE 233

Query: 226  PVDN------GANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE 278
            P D       G++ L+ VP     P  G+L+  E  + Y +    D   +I R  D   E
Sbjct: 234  PADFTQELELGSSHLIPVPA----PLGGLLILGETSIKYVDA---DNNEIISRPLD---E 283

Query: 279  RGVLIVSAATHRQKTLFFFLLQTEYGDIF--KVTLEHDNEHVSELKIKYFDTIPVTASMC 336
              + +       Q+    +LL  +YG +F   + L+ DN+ V   K+         + + 
Sbjct: 284  ATIFVAWEQVDSQR----WLLADDYGRLFFLMLVLDSDNQ-VESWKLDLLGKTSRASVLV 338

Query: 337  VLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRI 396
             L  G LF  S  G+  + +      D                                +
Sbjct: 339  YLGGGVLFLGSHQGDSQVLRISNGSVD-------------------------------VV 367

Query: 397  EQVESLMPIMDMRIANL-----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEM 445
            + + ++ PI+D  I +L           F     +I T  G     +LR +R G+ + E+
Sbjct: 368  QTLPNIAPILDFTIMDLGSRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEEL 427

Query: 446  AVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPS-- 503
             V       + +W ++     +F   ++V+F + T V       E      FL  + S  
Sbjct: 428  GVLGEMDHITDLWGLQVGSKGDFLDILLVTFVDETRVFHFSPDGEVEEMDHFLGLSLSEN 487

Query: 504  --LAVSLIGDDSLMQVHPSGIRHIREDGRIN-EWRTPGKRTIVKVGSNRLQVVIALSGGE 560
              LA +L G   L       +    E G +  EW TP  + I+   S    +++ ++GGE
Sbjct: 488  TLLAANLPGGRILQVTERRVLIAEVEGGMVTYEW-TPPNQLIITAASTNNDMIVLVAGGE 546

Query: 561  LIYFEVDMTGQLLEVEKHEMSGD--VACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDP 618
            L+   +D+  ++  V + +   +  ++ + + + P G      + +  +    ++  L  
Sbjct: 547  LVTV-LDIGNEVRLVTQKDFGANSQISGVTVPASPTG------VFIAGFPQLAKVSVLKL 599

Query: 619  DDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVT 678
             D  +   VQS S  P    F   ++ +  +  +D P +LF++    + + +    D V+
Sbjct: 600  QDLAE---VQSTSVGPAGEAF--PRSVLVADVLSDSPPTLFISMADGSVITYSFNPDDVS 654

Query: 679  GQLSDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYA 737
              L+      LG   P    +  G G   +      P + Y   GR + + ++ E     
Sbjct: 655  --LTGMTKLILGSEQPTFKKLPRGDGLFNVFATCENPSMIYGSEGRIIYSAVNSEGASRI 712

Query: 738  ASFSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIET 797
               +S+     +     + L++  +++   T  +T LP+  T RR    P +K       
Sbjct: 713  CHLNSEAYPGSIAVATLHDLKIALVDKERTTQIQT-LPIGATVRRVAYSPSEKAF----- 766

Query: 798  DQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGYPKAESDK 857
              G  T E +     E  ++  M                      L+DE           
Sbjct: 767  --GIGTIERKLVDGAEIVKSEFM----------------------LADE----------- 791

Query: 858  WVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNF---HDKEHGTLLAVGTAKGLQFWPK 914
                 R LD          EL+  E   S+    F    D+++G  +      G  F   
Sbjct: 792  --ILFRRLDA--------FELRPEELVESVIRAEFPVGKDEKNGATVKDRFIVGTAFLDD 841

Query: 915  R--NIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY----- 967
                 + G I I+  V+ G+ L  + +  V+G   AL     R++A +   + +Y     
Sbjct: 842  EGDESIRGRILIFE-VDNGRKLTQVAELPVKGACRALAMLGNRIVAALVKTVVVYKAVSN 900

Query: 968  DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDE----NQLYIFAD 1023
            + G  + L K  +       V +    + I V D+ +S    +Y+  E    + L   A 
Sbjct: 901  NFGAMK-LEKLASYRTSTAPVDVTVTGNLIAVSDLMKSVCLVEYKEGEDGLPDTLTEVAR 959

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAP 1083
                 W T    I  DT   +D  GN+  + L ++ +  +EED                 
Sbjct: 960  HFQTVWATGVACIAQDTFLESDAEGNL--IILCRNTTG-VEEDDK--------------- 1001

Query: 1084 NKMEEIVQFHVGDVVTSLQKASLVPGGGESV----IYGTVMGSLGAMLAFSSRDDVDFFS 1139
             ++E   +  +G++V  ++  ++      +V       TV GS+  + A  + D  DF  
Sbjct: 1002 RRLEVTGEISLGEMVNRIRPVNIQQLTSVAVTPRAFLATVEGSI-YLFAMINPDHQDFLM 1060

Query: 1140 HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDV------IDGDLCEQFPTLSLDLQRKIADE 1193
             L+  +  +   +       +R  +  V++       +DG+L E+F      +Q +I   
Sbjct: 1061 RLQATIAGKVELVGNMPFNEFRGFHSMVREAQEPYRFVDGELIERFLACEPSVQEEIVSI 1120

Query: 1194 LDR-TPGEILKKLEEIR 1209
            + + T  E+   +E +R
Sbjct: 1121 VGKMTVDEVKSMIEALR 1137


>gi|24653655|ref|NP_725397.1| cleavage and polyadenylation specificity factor 160, isoform B
           [Drosophila melanogaster]
 gi|15292103|gb|AAK93320.1| LD38533p [Drosophila melanogaster]
 gi|21627189|gb|AAM68553.1| cleavage and polyadenylation specificity factor 160, isoform B
           [Drosophila melanogaster]
          Length = 1420

 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 158/407 (38%), Gaps = 45/407 (11%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           R+E L +  ++G + SL    L G+ +D +++     ++ +L+++P       +    F 
Sbjct: 67  RLECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFE 126

Query: 108 KSGCRRIVPGQYLA----VDPKGRAVMIGACEKQKLVYVLNRDTAA-RLTISSPLEAHKS 162
           +   R    G+Y      VDP  R  ++    K+ +V    +D +   + ++      K+
Sbjct: 127 EDDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKA 186

Query: 163 HTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRK 222
            T + S          PI A+  +  +  D D       + Q    +YE  L + +    
Sbjct: 187 PTAMVS--------RTPIMASYLI--ALRDLDEKIDNVLDIQFLHGYYEPTLLILY---- 232

Query: 223 WSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD------LP 276
             EPV      +   P       G LV   N VIY NQ  P     +   AD      L 
Sbjct: 233 --EPVRTCPGRIKVYPIQ-KPIGGCLVMTVNAVIYLNQSVPPYGVSLNSSADNSTAFPLK 289

Query: 277 AERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN-EHVSELKIKYFDTIPVTAS 334
            + GV I +  A      +   ++    GD++ +TL  D+   V            +T+ 
Sbjct: 290 PQDGVRISLDCANFAFIDVDKLVISLRTGDLYVLTLCVDSMRTVRNFHFHKAAASVLTSC 349

Query: 335 MCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGL---- 390
           +CVL S Y+F  S  GN  L  F         E   ST++  +E  Q    Q R L    
Sbjct: 350 ICVLHSEYIFLGSRLGNSLLLHF--------TEEDQSTVITLDEVEQQSEQQQRNLQDED 401

Query: 391 KNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILR 437
           +NL  I  V+ L        +   E+E  +++   G G ++S+  LR
Sbjct: 402 QNLEEIFDVDQLEMAPTQAKSRRIEDEELEVY---GSGAKASVLQLR 445



 Score = 43.9 bits (102), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 32/155 (20%)

Query: 457 VWTV------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
           VWTV      K + ND+ D ++++S  N+TLVL  G+ + E+ ++GF    P++ V  +G
Sbjct: 528 VWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTGQEINEIENTGFTVNQPTIFVGNLG 586

Query: 511 DDS-LMQVHPSGIRHIREDGRINEWRTPGKRTI----VKVGSNRLQVVIA-------LSG 558
               ++QV     RH+R           G R I    + VGS  +QV IA       +  
Sbjct: 587 QQRFIVQV---TTRHVR--------LLQGTRLIQNVPIDVGSPVVQVSIADPYVCLRVLN 635

Query: 559 GELIYFEVDMT--GQLLEVEKHEMSGDVACLDIAS 591
           G++I   +  T     L + KH +S   A + I++
Sbjct: 636 GQVITLALRETRGTPRLAINKHTISSSPAVVAISA 670


>gi|193702313|ref|XP_001945086.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Acyrthosiphon pisum]
          Length = 1335

 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 135/629 (21%), Positives = 239/629 (37%), Gaps = 78/629 (12%)

Query: 3   LYSLTLQQ--PTGIIAAINGNFSGTKTPEIVVARGKVLELLR--PENSG------RIETL 52
           ++SL  Q   PT +  A+   F       +VVA   +L + R  P ++       + E L
Sbjct: 1   MFSLCKQTRIPTCVEHAVYCYFFNRVEKCLVVAGVNILRVYRLVPTDTTCQPPKTKFECL 60

Query: 53  VSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG----K 108
               +FG I  L    L  S  D +++     +  ++EY+   +    +    F     K
Sbjct: 61  AQYTLFGNIMCLQSVTLCPSSPDALLLSFSEAKFSLVEYDRDMHSLRTLSLHYFEDDKFK 120

Query: 109 SGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNR--DTAARLTISSPLEAHKSHTIV 166
           +G  +      + VDP GR V+        +V    R  D  A+     P     S+TI 
Sbjct: 121 NGHTQHWSPPLIRVDPDGRCVVGLVYGSYFVVLPFGRTIDDNAKSAQVMP-----SYTI- 174

Query: 167 YSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNL---------TFYELDLGLN 217
             I  ID   +N     ++ D+     + T     E  K           T   + + LN
Sbjct: 175 -PISKIDPKMNN----IMDFDFLHGYYEPTLLILYEPVKTFAGRIAVRKDTCAMVAISLN 229

Query: 218 ---HVSRK-WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPD----VR 266
              HV    WS    P D    + V+ P GG     VL+ A N +IY NQ  P     + 
Sbjct: 230 IQQHVHPVIWSLDSLPYDCQKVIAVSRPIGG-----VLIMAVNSLIYLNQSVPPFGVALN 284

Query: 267 AVIPRRADLP---AERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN-EHVSELK 322
           ++     + P    E   L++  AT    +    +     GD++ +TL  D+   V    
Sbjct: 285 SIAKTLTNFPLGQQEDINLVLDRATATFISSDKLVTSLCNGDLYVITLYADSMRAVRSFH 344

Query: 323 IKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEAS--SSTLMETEEGF 380
            +   +  +T  + V    YLF  S  GN  L ++ A     D E S       ET+E  
Sbjct: 345 FEKCASSVLTTCITVCLDSYLFLGSRLGNSLLLRYYARSQSNDDEPSIKRKKTDETDEDL 404

Query: 381 QPVFFQPRGLKNLVRIEQ--VESLMPIMDM------------RIANLFEEEAPQIFTLC- 425
             +      ++  + +E    E    I+++             I++ F  +   +  LC 
Sbjct: 405 VELEVYGSEVQTSICLESYSFEVCDSIINIGPCSQASIGEPAYISDEFSSDEHDVELLCT 464

Query: 426 -GRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLS 484
            G G   +L +L   +    +    L G    +WTV     ++F  +++++  ++TL+L 
Sbjct: 465 SGHGKNGALSVLHRSIKPQLVTTFHLDGYKD-MWTVHGE--NDFHTFMILTNVDSTLILQ 521

Query: 485 IGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVK 544
            G+ + E+  SG+     ++ V  + +  ++QV    +R +    ++          I+ 
Sbjct: 522 TGQEINELDSSGYATREHTVFVCNM-NKFVIQVLRYSVRLLNGSEQLQSVSLDFGSPIIH 580

Query: 545 VGSNRLQVVIALSGGELIYFEVDMTGQLL 573
             S     V+    G++I   V  TG++L
Sbjct: 581 GSSCNPYAVLLTEDGQVIVLTVKSTGRIL 609


>gi|115397303|ref|XP_001214243.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114192434|gb|EAU34134.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1140

 Score = 53.5 bits (127), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 120/582 (20%), Positives = 231/582 (39%), Gaps = 68/582 (11%)

Query: 223 WSEPVDNGANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGV 281
           +++ +D GA+ L+ VP     P  G+L+  E  + Y +    D   ++ R  D   E  +
Sbjct: 236 FAQELDLGASHLIPVPA----PLGGLLILGETSIKYVDD---DNNEIVSRLLD---EATI 285

Query: 282 LIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKS 340
            +       Q+    +LL  +YG +F + L  D+E+ V   ++ +       +++  L  
Sbjct: 286 FVAWEQVDSQR----WLLADDYGRLFFLMLVLDSENQVQGWQLDHLGNTSRASTLVYLGG 341

Query: 341 GYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVF-FQPRGLKNLVRIEQV 399
           G +F  S  G+  + +         V   S  +++T     P+  F    L N     Q 
Sbjct: 342 GVIFVGSHQGDSQVLR---------VGDGSFEIIQTLPNIAPILDFTIMDLGNRTSESQT 392

Query: 400 ESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWT 459
                         F     +I T  G     +LR +R G+ + E+ V       + +W 
Sbjct: 393 HE------------FSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEMEHITDLWG 440

Query: 460 VKKNVNDEFDAYIVVSFNNATLVL---SIGETVEEVSDSGFLDTTPS----LAVSLIGDD 512
           ++     +F   ++V+F + T V    S GE VEE+    FL  + S    LA +L G  
Sbjct: 441 LQFKAKGDFLDTLLVTFIDETRVFHFSSDGE-VEELDQ--FLGLSLSENTLLAANLPGG- 496

Query: 513 SLMQVHPSG--IRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI-YFEVDMT 569
            ++QV      I  +  +    EW    +  I    +N   VV+ ++GGEL+  F++   
Sbjct: 497 RILQVTERRVLIADMESEMVTYEWTPSDQLIITSASANEDSVVL-VAGGELMTVFDIRNN 555

Query: 570 GQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQS 629
            Q++  +       ++ + + S P G      + +  +  + ++  L   D  ++    +
Sbjct: 556 VQIVTQKNFGADSQISGVTVPSSPTG------VCIVGFPQSAKVSVLKLQDLTEL---HA 606

Query: 630 VSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFL 689
            S  PE   F   ++ +      D P ++F++  + +G +     +     L+      L
Sbjct: 607 TSLGPEGEAF--PRSVLVANVLVDSPPTIFIS--MADGSVITYSFNANDYSLTGMNKLIL 662

Query: 690 GLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEG 748
           G   P    +  G G   +      P L Y   GR + + ++ E       F+S+   E 
Sbjct: 663 GSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSEAYPES 722

Query: 749 VVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKK 790
           +     + L++  +++   T  +T LP+  T RR    P +K
Sbjct: 723 IAVATSHELKIALVDKERTTQIQT-LPMGATVRRVAYSPSEK 763


>gi|47217773|emb|CAG05995.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1446

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 124/624 (19%), Positives = 225/624 (36%), Gaps = 134/624 (21%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-----------------P 43
           MY        PT +  ++  NF  +K   +VVA    L + R                  
Sbjct: 1   MYAVYRQAHTPTAVEFSVYCNFISSKEKNLVVAGTSQLFVYRIIHDVESTSKTDKSSDSK 60

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + +  +FG + S+   +L G+ +D +++     ++ ++EY+P  +    +  
Sbjct: 61  TRKEKLEQVAAFSLFGNVMSMESVQLVGANRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLV--YVLN-RDTAARLTISSPLEAH 160
             F +   R  +  +        + + +G   K   +  Y+++ R+   +L         
Sbjct: 121 HYFEEPELRDTLTDE--------QELGVGEGPKSSFLPTYIIDVRELDEKL--------- 163

Query: 161 KSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAA-SEAQKNLTFYELDLGLNHV 219
                   +  ID  F +  +    L   E +Q   G+ A  +AQ ++    L++     
Sbjct: 164 --------LNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQAQCSIVAISLNIMQKVH 215

Query: 220 SRKWSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD-- 274
              WS    P D    M V  P GG     V+V A N ++Y NQ  P     +    +  
Sbjct: 216 PVIWSLSNLPFDCTQVMAVPKPIGG-----VVVFAVNSLLYLNQSVPPYGVALNSLTNGT 270

Query: 275 ----LPAERGVLIVSAATHRQKTLF-FFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTI 329
               L  +  V I    +      +   ++  + G+I+ +TL  D   +  ++  +FD  
Sbjct: 271 TAFPLRLQDEVKITLDCSQADFIAYDKMVISLKGGEIYVLTLITDG--MRSVRAFHFDKA 328

Query: 330 P---VTASMCVLKSGYLFAASEFGNHALY-----------------QFQAIGADPDVEAS 369
               +T  M  ++ GYLF  S  GN  L                  Q +    D D +  
Sbjct: 329 AASVLTTCMVTMEPGYLFLGSRLGNSLLLKYTEKLQEMPLEEGKDKQEKEKDNDMDKQVY 388

Query: 370 SSTLMETEEGFQPVFF--------------QPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
             TL       Q  FF              Q          E  +S++ I     A++ E
Sbjct: 389 VHTLNSFSAHSQHDFFVDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANASMGE 448

Query: 416 ------------EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN 463
                       E   ++    G G   +L +L+  +    +   +LPG    +WTV  N
Sbjct: 449 PAFLSEEFQGNPEPDLEVVVCSGHGKNGALSVLQRSIRPQVVTTFELPGC-HDMWTVISN 507

Query: 464 VNDE----------FDA-------------YIVVSFNNATLVLSIGETVEEVSDSGFLDT 500
              E          F A             ++++S  ++T++L  G+ + E+  SGF   
Sbjct: 508 EVKEDKKVPQSPGSFTATHYSLEEDTKKHGFLILSREDSTMILQTGQEIMELDTSGFATQ 567

Query: 501 TPSLAVSLIGDDS-LMQVHPSGIR 523
            P++    IGD+  ++QV P GIR
Sbjct: 568 GPTVFAGNIGDNKYIIQVSPMGIR 591


>gi|303313681|ref|XP_003066852.1| CPSF A subunit region family protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|240106514|gb|EER24707.1| CPSF A subunit region family protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|320031496|gb|EFW13458.1| UV-damaged DNA binding protein [Coccidioides posadasii str.
           Silveira]
          Length = 1144

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 155/796 (19%), Positives = 290/796 (36%), Gaps = 118/796 (14%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   L   + +  AI   F       +VVA+   LE   P   G +    +  I+G I  
Sbjct: 3   YITPLHHASSVDNAIKLQFMNPGEDCLVVAKSNRLEFYLPTPDG-LSLQHAKAIYGKISV 61

Query: 64  LAQF-RLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET----FGKSGCRRIVPGQ 118
           L +  R   S  D + VG+D      L ++PS     ++H E           R    G 
Sbjct: 62  LQKVPRSHSSATDLLFVGTDRYAYFTLSWDPSTC---QLHTEQKYLDIADPSLRDNQSGD 118

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRD---------------TAARLTISSPLEAHKSH 163
              VDP G+ + +   E    V  + ++               +  R  +  PL+     
Sbjct: 119 RSWVDPSGKFLTMEIYEGIISVIPIAQEPLKRPSPSASRSSGTSEQREYLGEPLQTRIEE 178

Query: 164 TIVYSICGIDCGFDNPIFAAIELDYSEADQD--------STGQAASEAQKNLTFYELDLG 215
            IV S   +      P   AI  + ++            S G    EA     F ++D  
Sbjct: 179 LIVRSTAFLHHDPTKPPRIAILYENTQGKVKLKLRDLIYSRGIPGGEASAA-EFRDVD-- 235

Query: 216 LNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL 275
                    + ++ GA++LV VP       GVL+  E F+ Y       +  V       
Sbjct: 236 ------DLYDDLELGADILVPVPLP---LGGVLILGEKFIKY-------IDTVKNETITR 279

Query: 276 PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTAS 334
           P E   + V+      +    +LL  +YG +F   L  ++ + V   K+         ++
Sbjct: 280 PLENNTIFVAWEQLDNQR---WLLADDYGRLFFFMLILNSANAVQSWKVGLLGETSRASA 336

Query: 335 MCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLV 394
           +  L  G +F  S  G+                  S  +  TE  F+             
Sbjct: 337 LVHLGGGVVFLGSHQGD------------------SHVIRITEGSFEI------------ 366

Query: 395 RIEQVESLMPIMDMRIANL----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSE 444
            I+ + ++ PI+D  + +L          F     +I T  G     SLR +R G+ + +
Sbjct: 367 -IQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGAFRDGSLRSVRSGVGMED 425

Query: 445 MAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTT 501
           + V       + +W V     + F   +++SF + + V      GE  E+    G L   
Sbjct: 426 LGVLGAMEHITDLWGVSAFCPEGFCDTLLLSFVDESRVFHFSPDGEVEEKDDFLGLLLGE 485

Query: 502 PSLAVSLIGDDSLMQVHPSGIRHIREDGRIN--EWRTPGKRTIVKVGSNRLQVVIALSGG 559
           P++  + +    ++QV   G R    + R+   EW     R I    SN   +V+ + G 
Sbjct: 486 PTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVESRKITAASSNDRHLVLMVGGQ 545

Query: 560 ELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPD 619
           +L+ F++    ++   +  E    V+ + + S P          +  +  +  +  +D  
Sbjct: 546 KLMVFDIGDDIKMSSTKTFEADKQVSGVALTSSPIQA------CILCFPQSAEVTIIDLT 599

Query: 620 DCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTG 679
           D + I   +++  P +++    + A +     +D   +LF+   + +G +F   +++   
Sbjct: 600 D-LNIRHTETLGEPGDAVPRSVLVACM----FSDRAPTLFV--AMADGSVFSFSLNVANY 652

Query: 680 QLSDSRSRFLGLRPPKLFSVV--VGGRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYA 737
            LSD+    LG   P +F ++    G   +      P L Y    R + + ++ +     
Sbjct: 653 SLSDANKLVLGSEAP-VFKLLPRADGLYNIFATCDHPSLIYASEDRIVYSAVNSDKATRI 711

Query: 738 ASFSSDQCVEGVVSVA 753
             F++ +   G ++VA
Sbjct: 712 CHFNA-EAYPGAIAVA 726


>gi|225558618|gb|EEH06902.1| DNA damage-binding protein 1a [Ajellomyces capsulatus G186AR]
          Length = 1201

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 114/543 (20%), Positives = 205/543 (37%), Gaps = 86/543 (15%)

Query: 225 EPVDNGANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLI 283
           E ++ GA+ LV VP     P  G+LV  E  + Y +    +  +   + A       + +
Sbjct: 292 EELEMGASFLVPVPA----PLGGLLVLGETSIRYLDDASNECISQPLKEAT------IFV 341

Query: 284 VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKSGY 342
                  Q+    +LL  +YG +F + L  D ++ V   K+     IP  + +  +  G 
Sbjct: 342 AWEQVDGQR----WLLADDYGRLFFLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGGGI 397

Query: 343 LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            F  S  G+  L +                   TE  F+              I+   ++
Sbjct: 398 TFIGSHQGDSELIRI------------------TEGSFEV-------------IQTFANI 426

Query: 403 MPIMDMRIANL------------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
            PI+D  I +L            F     +I T  G     SLR +R G+ + E+ V   
Sbjct: 427 APILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRSVRSGVGMEEVGVLGA 486

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTTPSLAVS 507
               + +W ++     EF   ++VSF + T V      GE  E+    G      +L  +
Sbjct: 487 MKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGEVEEKEEFMGLGLAESTLLAA 546

Query: 508 LIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE 565
            +    ++QV    +R    DG   I EW     + I    SN   +V+ + G  L+ F+
Sbjct: 547 NLPHGRILQVTEWNVRVAELDGGMVIWEWSPEQTKAITAASSNDDHLVLMVGGQVLMIFD 606

Query: 566 VDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL 625
           +     +   +   +   V+ + + + P    R+  L +      + ++SL PD  + I 
Sbjct: 607 ISGDINITGEKDFGVDTQVSGVTVTTSP---ARACILCLPQTAEVV-VMSL-PD--LAIR 659

Query: 626 SVQSVSSP----PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL 681
              S+  P    P S+L  EV          ++PA+LF++  + +G +F    +     L
Sbjct: 660 RSTSLGEPGDAVPRSVLVAEVL--------PNNPATLFVS--MADGSVFSFSFNSEDFSL 709

Query: 682 SDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASF 740
           +      LG   P    +  G G   +     +P L Y   GR + + ++ +       F
Sbjct: 710 TSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYAVEGRIVYSAVNSDQASRICHF 769

Query: 741 SSD 743
           +S+
Sbjct: 770 NSE 772


>gi|195455711|ref|XP_002074834.1| GK23274 [Drosophila willistoni]
 gi|194170919|gb|EDW85820.1| GK23274 [Drosophila willistoni]
          Length = 1463

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 97/476 (20%), Positives = 186/476 (39%), Gaps = 97/476 (20%)

Query: 774  LPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN 833
            +PLR TPR+ V   + ++  +I   +  +T   R                         N
Sbjct: 1037 VPLRCTPRQLVYHRENRVYCLITQTEEPMTKFYRF------------------------N 1072

Query: 834  GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS----ANTTCLLELQDNEAAFSICT 889
            G+D+   +    E++ YP       V    ++ P +     + +   E  ++  AF I  
Sbjct: 1073 GEDKELSEESRGERFIYPIGSQFDMV----LISPETWEIVPDASIRFEPWEHVTAFKIVK 1128

Query: 890  VNFHDKEHGT--LLAVGTAKGLQFWPKRNIVA-GYIHIYRFVE----EGK-----SLELL 937
            +++     G    L +GT     F    +I + G IHIY  +E     GK      L+ +
Sbjct: 1129 LSYEGTRSGLKEYLCIGT----NFNYSEDITSRGNIHIYDIIEVVPEPGKPMTKFKLKEV 1184

Query: 938  HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC--ENKLFPNTIVSINTYRD 995
             K + +G   A+    G L+ G+G  + ++ L    L+     +  ++ + I+++ +   
Sbjct: 1185 FKKEQKGPVSAISDVLGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITVKSL-- 1242

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAG---ADKFGN-IY 1051
             I++ D+ +S    +++ +   L + + D  P  +     +  +T  G    D   N I 
Sbjct: 1243 -IFIADVYKSISLLRFQEEYRTLSLASRDFNPLEVYGIEFMVDNTNLGFLVTDAESNLIV 1301

Query: 1052 FVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSL---------- 1101
            ++  P+        +  GG+             K+     +H+G VV ++          
Sbjct: 1302 YMYQPE------ARESLGGQ-------------KLLRKADYHLGQVVNTMFRVQCHQRGL 1342

Query: 1102 -QKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR-QEHPPLCGRDHMA 1159
             Q+   +      V+YGT+ G+LG  L    +    F     + +  Q+H  LCG +   
Sbjct: 1343 HQRQPFLYENKHFVVYGTLDGALGYCLPLPEKVYRRFLMLQNVLLSYQDH--LCGLNPKE 1400

Query: 1160 YRS-------AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            YR+          P + +IDGDL   +  L+   + ++A ++     EIL  L EI
Sbjct: 1401 YRTLKSSKRLGINPSRCIIDGDLIWSYRLLANSERNEVAKKIGTRTEEILADLLEI 1456


>gi|384490729|gb|EIE81951.1| hypothetical protein RO3G_06656 [Rhizopus delemar RA 99-880]
          Length = 967

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 42/257 (16%)

Query: 927  FVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGI-GPVLRLYDLGKKRLLR--KCENK-L 982
            F  E    EL+    + G+   +   +  ++A + G +  LY+  K  LL+  + E K L
Sbjct: 732  FTIENSRCELIDAVDMPGVVYRMESIKNTIIAAVDGKIYGLYNF-KPDLLKGERIEFKFL 790

Query: 983  FPNTIVSINT---YRDRIYVGDIQESFHFCKYRRDEN--QLYIFADDSVPRWLTAAHHID 1037
              N +V+++      D + VGD+ ES    K  +DE   +L + A D+   W+TA   ++
Sbjct: 791  LHNNVVALDMDTDNNDTLLVGDLMESMSLLKVEKDEESLKLSLEAVDNKQVWMTAVKFVN 850

Query: 1038 FDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDV 1097
             + + GAD   N++ +  P     EI ++    K++ E G              +H+G +
Sbjct: 851  ENVLIGADDRHNLFTMIKP-----EIRQEGKTCKLELEGG--------------YHLGTL 891

Query: 1098 VTSLQKASL--VPGGGESV----------IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHM 1145
            V   +K  L  V    +++           + TV GS+G +    SR+  +FF  ++  +
Sbjct: 892  VNRFRKDILRDVENASDNIDSISKYESEFTFATVNGSIGTVKTI-SRESFEFFKGIQEGI 950

Query: 1146 RQEHPPLCGRDHMAYRS 1162
                P     DH  + S
Sbjct: 951  LNILPNNGNLDHGLWLS 967



 Score = 45.8 bits (107), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 13/250 (5%)

Query: 402 LMPIMDMRIANLFEEEAPQIFTLC-GRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV 460
           L PI+D  + + + ++  Q    C G    +S+RI+  G+  S+      P V  A+WT+
Sbjct: 356 LGPIVDFCLYD-YNKQGKQTMACCAGVEKDASIRIVENGIGFSKKYALDFPLV-YAMWTL 413

Query: 461 KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGF--LDTTPSLAVSLIGDDSLMQVH 518
             +  D     I  + +   L  S  E +E    + +  LDT+     + + +  ++Q  
Sbjct: 414 SLD-GDRDSLLISTALDTVLLKPSDQEELEVTQHTSYSALDTSQMTLAADMFNSFIVQAT 472

Query: 519 PSGIRHIREDGR---INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEV 575
            S +R +  D     I EW+ P   +I          V+   G  +IY E+   G  +E 
Sbjct: 473 SSFVRMMTNDEYGQLIGEWKPPTGTSIAIAKIKDSHCVVCCEGDMIIYLEMTNKG-FIEK 531

Query: 576 EKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSP-- 633
            K ++  + +C+ I++  E      ++  G+  +   ++ L   D   +L  + + S   
Sbjct: 532 SKRQLK-NASCISISTRKENETLYDYVVAGTCGSNPSVVFLQLPDLEVVLEHKDMPSTTG 590

Query: 634 PESLLFLEVQ 643
           P  LL + ++
Sbjct: 591 PNDLLVVTME 600


>gi|307190910|gb|EFN74734.1| Cleavage and polyadenylation specificity factor subunit 1
           [Camponotus floridanus]
          Length = 1418

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 129/632 (20%), Positives = 230/632 (36%), Gaps = 123/632 (19%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-------------PEN-- 45
           MY         TG+  AI  +F       +VVA   V+ + R              EN  
Sbjct: 1   MYSICKNTHPATGVEHAITCHFFNRTEKCLVVAGANVIRVFRLIPDIDMTRREKYTENRP 60

Query: 46  -SGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPS----KNVFDK 100
              ++E L    + G I S+    L GSQ+D +++     ++ ++EY+      + V   
Sbjct: 61  PKMKLECLAQYTLHGNIMSMQAVHLIGSQRDSLLLSFRDAKLSVVEYDQDIHDLRTVSLH 120

Query: 101 IHQETFGKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDT---------AARL 151
             +E   K G         + VDP+GR  ++    ++ +V    +D          +A+L
Sbjct: 121 YFEEEEIKDGWTNHHHIPIVRVDPEGRCAIMLIYGRKLVVLPFRKDPSLDDGDLLDSAKL 180

Query: 152 TISSPLEAHKSHTIVYSICG------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
           T S+      S+ IV           ID  F    +    L   E  +  +G+ A   Q 
Sbjct: 181 TSSNKTPILSSYMIVLKTLEEKMDNVIDLQFLYGYYEPTLLILYEPVRTFSGRIAVR-QD 239

Query: 206 NLTFYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
                 + L +        WS    P D    + V  P G     G L+ A N +IY NQ
Sbjct: 240 TCAMVAISLNIQQRVHPIIWSVSNLPFDCYQVVPVKKPLG-----GTLIMAVNSLIYLNQ 294

Query: 261 GHPDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFF----FLLQTEYGDIFKVT 310
             P     +   AD      L  + G   V  +    +  F      ++  + G+++ ++
Sbjct: 295 SIPPYGVSLNSLADTSTNFPLKPQEG---VKMSLEGSQVAFISGDRLVISLKSGELYVLS 351

Query: 311 LEHDNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGAD--PD 365
           L  D+  +  ++  +FD      +T+ +C+ +  YLF  S  GN  L +F     +   +
Sbjct: 352 LFADS--MRSVRGFHFDKAAASVLTSCVCMCEDNYLFLGSRLGNSLLLRFTEKEPETLKN 409

Query: 366 VEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFEEE-------A 418
           +  +  T+ E E    P     +  ++ +       ++ I D     ++  E        
Sbjct: 410 LNDNEITIEENESEETPA---KKAKQDFLGDWMASDVLDIKDPEELEVYGSETHTSIQIT 466

Query: 419 PQIFTLCGR----GPRSSLRILRPGLAVSEMAVSQLPGV--------------------- 453
             IF +C      GP  ++ +  P     E   +Q P V                     
Sbjct: 467 SYIFEVCDSLLNIGPCGNISMGEPAFLSEEFLHNQDPDVELVTTSGYGKNGALCVLQRSI 526

Query: 454 -PSAV-----------WTVKKNVNDE---------FDAYIVVSFNNATLVLSIGETVEEV 492
            P  V           WTV   +N++           A++++S  ++T++L  G+ + EV
Sbjct: 527 RPQVVTTFELPGCEDMWTVIGTLNNDEQVKAEAEGSHAFLILSQEDSTMILQTGQEINEV 586

Query: 493 SDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIR 523
             SGF    +   A +L  +  ++QV   G+R
Sbjct: 587 DQSGFSTQGSTVFAGNLGANRYIVQVTQMGVR 618


>gi|218194461|gb|EEC76888.1| hypothetical protein OsI_15095 [Oryza sativa Indica Group]
          Length = 1503

 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 12/160 (7%)

Query: 872  TTCLLELQDNEAAFSICTVNFHD---KEHGTLLAVGTAKGLQFWPKRNIVA-GYIHIYRF 927
            T   + +Q  E A ++  V  H+   KE+ TLLA+GTA  L      ++ A G + ++ F
Sbjct: 1097 TKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVL----GEDVAARGRVLLFSF 1152

Query: 928  VEEGKSLELL---HKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFP 984
            ++   S  L+   +  + +G   A+   QG LL   GP + L       L         P
Sbjct: 1153 MKSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGAELTAVAFYDA-P 1211

Query: 985  NTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADD 1024
              +VS+N  ++ +  GDI +S +F  ++   +QL + A D
Sbjct: 1212 LHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKD 1251



 Score = 45.8 bits (107), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 45/237 (18%)

Query: 994  RDRIYVGDIQESFHFCKYRRDENQLYIFADD--SVPRWLTAAHHIDFDTMA--GADKFGN 1049
            ++ +  GDI +S +F  ++   +QL + A D  S+  + T    ID  T++   +D   N
Sbjct: 1283 KNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATE-FLIDGSTLSLVASDSDKN 1341

Query: 1050 I-YFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVP 1108
            +  F   P+ V              W+  KL           +FHVG  +T   +  ++P
Sbjct: 1342 VQIFYYAPKMVE------------SWKGQKLLSR-------AEFHVGAHITKFLRLQMLP 1382

Query: 1109 GGGES--------VIYGTVMGSLGAMLAFSSRDDVDF--FSHLEMHMRQEHPPLCGRDHM 1158
              G S        +++G + G +G +      D++ F     L+  +    P +CG +  
Sbjct: 1383 TQGLSSEKTNRFALLFGNLDGGIGCIAPI---DELTFRRLQSLQRKLVDAVPHVCGLNPR 1439

Query: 1159 AYRSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            ++R  +   K       ++ID +L   +  LSLD Q  +A ++  T  +IL    +I
Sbjct: 1440 SFRQFHSNGKGHRPGPDNIIDFELLAHYEMLSLDEQLDVAQQIGTTRSQILSNFSDI 1496



 Score = 45.1 bits (105), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 71/340 (20%), Positives = 141/340 (41%), Gaps = 68/340 (20%)

Query: 245 SGVLVCAENFVIYKNQG------------HPDVRAVIPRRADLPAERGVLIVSAATHRQK 292
           SGVLV   N + Y +Q             HPD    I  +++   E   L  + AT    
Sbjct: 324 SGVLVICANSIHYHSQSTSCSLDLNNFSSHPDGSPEI-SKSNFQVE---LDAAKATWFSN 379

Query: 293 TLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNH 352
            +  F   ++ G++  +T+ +D   V  L +       +++++  + + + F  S  G+ 
Sbjct: 380 DIVMF--SSKAGEMLLLTVVYDGRVVQRLDLMKSKASVLSSAVTSIGNSFFFLGSRLGDS 437

Query: 353 ALYQF-----QAIGADPDVEASS----------------STLMETEEGFQPVFFQ----P 387
            L QF     +++  D   E S+                S +++     + + FQ    P
Sbjct: 438 LLVQFSYGASKSVLQDLTNERSADIEGDLPFSKRLKRIPSDVLQDVTSVEELSFQNIIAP 497

Query: 388 RGLKNLVRIEQV--ESLM---PIMDMRI---ANL-------FEEEAPQIFTLCGRGPRSS 432
             L++  +I  +  ++L+   P+ D      AN         ++   ++    G G   S
Sbjct: 498 NSLESAQKISYIVRDALINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGS 557

Query: 433 LRILRPGLAVSEMAVSQLPGVPSAVWTV-------KKNVNDEFDAYIVVSFNNATLVLSI 485
           L +L+  +    +   +LP     +WTV       +   ++E+ AY+++S  N T+VL  
Sbjct: 558 LSVLQQSIRPDLITEVELPSC-RGIWTVYYKSYRGQMAEDNEYHAYLIISLENRTMVLET 616

Query: 486 GETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
           G+ + EV+++   F+  +   A +L G   ++QV+  G R
Sbjct: 617 GDDLGEVTETVDYFVQASTIAAGNLFGRRRVIQVYGKGAR 656


>gi|255075065|ref|XP_002501207.1| predicted protein [Micromonas sp. RCC299]
 gi|226516471|gb|ACO62465.1| predicted protein [Micromonas sp. RCC299]
          Length = 1423

 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 23/130 (17%)

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLA---VSEMAVSQLPGVPSAVWTVKKNVNDE----- 467
           EE  ++   CG G   +L IL+ G+    V+E+    LPG+    WTV     D      
Sbjct: 514 EERAELVAACGHGKNGALAILQRGIQPELVTEVEAGTLPGL-MGTWTVYHESRDNERLRE 572

Query: 468 ------------FDAYIVVSFNNATLVLSIGETVEEVSDSGFL--DTTPSLAVSLIGDDS 513
                       F +Y+V+S  + T+VL  GE + EVS++  L  D     A ++ G   
Sbjct: 573 SGAAAAAANVDPFHSYLVISLESTTMVLETGEELREVSEAVELVTDAATLAAGNMHGRKR 632

Query: 514 LMQVHPSGIR 523
           + QVH  G+R
Sbjct: 633 IAQVHKGGVR 642


>gi|291232724|ref|XP_002736306.1| PREDICTED: cleavage and polyadenylation specific factor 1-like
           [Saccoglossus kowalevskii]
          Length = 304

 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 11/160 (6%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-------PENSGRIETLV 53
           MY     +  PTGI   + G+F   +   +++A    L + R        +   ++E L 
Sbjct: 1   MYALYRQIHPPTGIEHCVYGHFFSKEEKNLIIAGATDLHVYRLLSDVDSKQKKSKLEHLR 60

Query: 54  STEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRR 113
           S  +FG I SL   RL G+ +D +++     ++ ++EY+P  +    +    F +   + 
Sbjct: 61  SFSLFGNIMSLQTTRLAGASRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEEALKE 120

Query: 114 IVPGQY----LAVDPKGRAVMIGACEKQKLVYVLNRDTAA 149
                Y    + VDP  R  ++     + +V    R+ AA
Sbjct: 121 GYVSNYYIPQVVVDPDNRCAVMLMYGSKLVVLPFRREGAA 160


>gi|148697643|gb|EDL29590.1| cleavage and polyadenylation specific factor 1, isoform CRA_b [Mus
           musculus]
          Length = 1311

 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 110/551 (19%), Positives = 205/551 (37%), Gaps = 105/551 (19%)

Query: 68  RLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG----KSGCRRIVPGQYLAVD 123
           +L G+++D +++     ++ ++EY+P  +    +    F     + G  + V    + VD
Sbjct: 6   QLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVD 65

Query: 124 PKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAA 183
           P GR   +     + +V    R++ A        E  +S  +   I  +    D  +   
Sbjct: 66  PDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVR-ALDEKLLNI 124

Query: 184 IELDY------------SEADQDSTGQAASEAQKNLTFYELDLGLNHVSRK--WSE---P 226
           I+L +             E +Q   G+ A   Q   +   + L +        WS    P
Sbjct: 125 IDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCSIVAISLNITQKVHPVIWSLTSLP 183

Query: 227 VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD------LPAERG 280
            D    + V  P GG     V++ A N ++Y NQ  P     +           L  + G
Sbjct: 184 FDCTQALAVPKPIGG-----VVIFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEG 238

Query: 281 VLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIP---VTASMC 336
           V I +  A     +    ++  + G+I+ +TL  D   +  ++  +FD      +T SM 
Sbjct: 239 VRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG--MRSVRAFHFDKAAASVLTTSMV 296

Query: 337 VLKSGYLFAASEFGNHALYQFQAI-----------GADPDVEASSSTLMETEEGFQPVFF 385
            ++ GYLF  S  GN  L ++               AD +   S    +E   G+     
Sbjct: 297 TMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKRVEPAVGWTGGKT 356

Query: 386 QPRGLKNLVRI----------------EQVESLMPIMDMRIANLFE--------EEAPQ- 420
            P+   + + +                E  +S++ I     A + E        + +P+ 
Sbjct: 357 VPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEP 416

Query: 421 ---IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD-------- 469
              I    G G   +L +L+  +    +   +LPG    +WTV   V  E +        
Sbjct: 417 DLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEETPKAEST 475

Query: 470 ----------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS 513
                            ++++S  ++T++L  G+ + E+  SGF    P++    IGD+ 
Sbjct: 476 EQEPSAPKAEEDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNR 535

Query: 514 -LMQVHPSGIR 523
            ++QV P GIR
Sbjct: 536 YIVQVSPLGIR 546


>gi|145348791|ref|XP_001418827.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579057|gb|ABO97120.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1386

 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/356 (20%), Positives = 148/356 (41%), Gaps = 72/356 (20%)

Query: 298 LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQF 357
           L+ T+ G +  + L  D   +  + ++      +++ MC+L    LF  S  G+  L +F
Sbjct: 332 LVTTKTGALLLLALHTDGRSLRRMMLQRAGGAVLSSGMCLLSRDLLFLGSRIGDSLLVKF 391

Query: 358 Q------AIGADPDVEASS-----------------------------STLMETEEGFQP 382
                  A    PD E  S                             +  ++TE+  + 
Sbjct: 392 TPKEEPTAPLMLPDAEDESEDEATEKSKDDDDELEALLYGTTKTETVQTDAVQTEKKREG 451

Query: 383 VFFQPRGLK----NLVRIEQVESLMPIMDMRIA-----NLFEEEAPQIFTLCGRGPRSSL 433
           +     GLK    +L   + +  + P++D+ +         + E  ++ T CG+G   +L
Sbjct: 452 LAGIIPGLKVAGYDLKVKDSLLGVAPVVDIAVGASAPMGSNKNERTELITACGQGKNGAL 511

Query: 434 RILRPGLA---VSEMAVSQLPGVPSAVWTV------KKNVNDEFDAYIVVSFNNATLVLS 484
            IL  G+    V+E+    LP +   +WT+       K   + F  ++++S  ++T+++ 
Sbjct: 512 AILTRGVQPELVTEVESGTLPNL-QGLWTLHYRKEGSKEEREPFHHHLLLSMKSSTMIME 570

Query: 485 IGETVEEVSDS-GFLDTTPSLAVS-LIGDDSLMQVHPSGIRHIR-----EDGRINEWRTP 537
            GE ++EVS S  F+    +LA S + G    +QV  +GIR ++     +D  + +   P
Sbjct: 571 TGEELQEVSASLEFITNQATLAASNIFGHYCSVQVTGTGIRVLKGGVKVQDVGLQDMDAP 630

Query: 538 GKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVP 593
               I         +++ LS G +         +LL  ++ +MS  V+ ++  ++P
Sbjct: 631 KGAAIASAQILDPYIIVRLSDGSI---------RLLSGDEKQMS--VSLMETGAIP 675



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 127/558 (22%), Positives = 205/558 (36%), Gaps = 94/558 (16%)

Query: 679  GQLSDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEYA 737
            GQL DS     G R  ++ +V  G G   +      P    + R R L  P   E    A
Sbjct: 856  GQLRDS---LAGARLTRIGNVGEGQGVQGIFVAGPNPLWLIVRRSRVLALPTRGEGEVVA 912

Query: 738  AS-FSSDQCVEGVVSVAGNALRVFTIERLGETFN-ETALPLRY-----TPRRFVLQPKKK 790
             + F +  C  G +   G AL    I ++    + E A P+R      TP      P  K
Sbjct: 913  FTVFHNVNCPHGFI--LGTALGGVRICQMPSKMHYEAAWPVRKVALKCTPHTITYLPDFK 970

Query: 791  LMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDEQYGY 850
            L  ++ +        E E         A +        D ME         P S +    
Sbjct: 971  LYALVTSAPVPWVEREIEQDNVHGIALAKVRRERAKANDDMELQYSVRLLVPGSLDSAWQ 1030

Query: 851  PKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTA-KGL 909
               E  + V C+R +  R  NT  LL                      +LLAVGTA  G 
Sbjct: 1031 HALEPGEHVQCVRNVQLRDINTGALL----------------------SLLAVGTAMPGG 1068

Query: 910  QFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEG----------IPLALCQFQGRLLAG 959
            +  P R    G + +++ V E +  E +   + +G             AL    G L+  
Sbjct: 1069 EDTPCR----GRVILFQMVWE-RDAESMDGYRWKGQVCCVREAKMACTALSALDGHLIVA 1123

Query: 960  IGPVLRLYDLGKKRLLRKCENKLF---PNTIVSINTYRDRIYVGDIQESFHFCKYRRD-- 1014
            +G  L ++      L     +  F   P   VSIN  ++ I VGD+++  HF +++ +  
Sbjct: 1124 VGTKLTVHTWDGVEL----NSVAFFDTPIHTVSINVVKNFILVGDLEKGLHFFRWKANGF 1179

Query: 1015 -ENQLYIFADDSVPRWLTAAHHIDFDTMA--GADKFGNI-YFVRLPQDVSDEIEEDPTGG 1070
             ++ + +  D      ++    ID  T++  G+D  GN   F   P+ +     E   G 
Sbjct: 1180 EKSIIQLSKDFDRMDVVSTEFLIDGATLSLLGSDMSGNARIFGYDPKSL-----ESWKGQ 1234

Query: 1071 KIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGG--ESVIYGTVMGSLGAMLA 1128
            K+        G+P  +  +V+F+V +  T+       P G    +V +GT+ G+LG  + 
Sbjct: 1235 KLLVRSAYHVGSP--ISRMVRFNV-EGTTAKAAPGERPKGTNRHAVFFGTLDGALGIFMP 1291

Query: 1129 FSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVK--------------DVIDGD 1174
                   D  ++ ++H  Q       R  +      F                 DV+DG 
Sbjct: 1292 ------TDEPTYAKLHALQRELNTTVRSPIGCNPRTFRTPKVFEGKHVQLLAPLDVLDGG 1345

Query: 1175 LCEQFPTLSLDLQRKIAD 1192
            L  +F TL+   QR +A+
Sbjct: 1346 LLSKFETLTFTEQRAVAE 1363


>gi|391328522|ref|XP_003738737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Metaseiulus occidentalis]
          Length = 1500

 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 11/173 (6%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKK------NVNDEFDAYIV 473
           +IF  CG     +L +L+  +    +   +LPG  + +WTV+       +V+++   +++
Sbjct: 574 EIFAACGHERSGALCVLQRTVRPQVITTFELPGC-TDLWTVRSSSTRSPDVDEDSHQFLI 632

Query: 474 VSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIRHIREDGRIN 532
           +S  ++T++L  G+ + E+  SGF   +P++    + D   ++QV P+ +R +    ++ 
Sbjct: 633 LSRPDSTMILQTGQEINELDHSGFCTQSPTIFAGNLADGRYIIQVCPNSVRLLEGVKQLQ 692

Query: 533 EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV---DMTGQLLEVEKHEMSG 582
           +        +V      L V++    G +I   +   D TG  L V K +  G
Sbjct: 693 QVPIDVGSPLVSASIADLHVLVMSQDGLVIQLTLRGDDTTGYKLSVLKPQFPG 745


>gi|195122290|ref|XP_002005645.1| GI18959 [Drosophila mojavensis]
 gi|193910713|gb|EDW09580.1| GI18959 [Drosophila mojavensis]
          Length = 1431

 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 122/323 (37%), Gaps = 30/323 (9%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           R+E L S  ++G + SL    L G  +D ++V     ++ +L+ +        +    F 
Sbjct: 67  RLECLASYSLYGNVMSLQSVSLAGGMRDALLVSFKDAKLSVLQLDADTQTLKTLSLHYFE 126

Query: 108 KSGCRRIVPGQY----LAVDPKGRAVMIGACEKQKLVYVLNRDTAA-RLTISSPLEAHKS 162
           +   R    G+Y    + VDP  R  ++    K+ +V    +D +   + ++      K+
Sbjct: 127 EDDIRGGWTGRYHVPVVRVDPDARCAIMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKA 186

Query: 163 HTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRK 222
            T + S          PI A+  +  + AD D       + Q    +YE  L + +    
Sbjct: 187 PTALVS--------RTPIMASYLI--ALADLDEKLDNVLDIQFLHGYYEPTLLILY---- 232

Query: 223 WSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD-------L 275
             EPV   A  +   P       G LV   N VIY NQ  P     +   AD        
Sbjct: 233 --EPVRTCAGRIKVFP-IQKPIGGCLVMTVNAVIYLNQSVPPYGVSLNSSADNSTSFPLK 289

Query: 276 PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN-EHVSELKIKYFDTIPVTAS 334
           P +   L +  A      +   ++    GD++ +TL  D+   V            +T+ 
Sbjct: 290 PQDNVRLSLDCANFAFIDVDKLVISLRTGDLYVLTLCVDSMRTVRNFHFHKAAASVLTSC 349

Query: 335 MCVLKSGYLFAASEFGNHALYQF 357
           +CV  + Y+F  S  GN  L  F
Sbjct: 350 ICVCHTEYIFLGSRLGNSLLLHF 372


>gi|348555856|ref|XP_003463739.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform 2 [Cavia porcellus]
          Length = 1387

 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 131/637 (20%), Positives = 233/637 (36%), Gaps = 129/637 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------------PENS 46
           MY        PTG+  A+  NF       +VVA    L + R               E  
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRPTEGK 60

Query: 47  GRIETLVS----TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH 102
              E L +    +  FG + S+A  +L        ++     ++ ++EY+P  +    + 
Sbjct: 61  SHREKLGAGGPPSLSFGNVMSMASVQLXXXXXXIALISFP--QLSVVEYDPGTHDLKTLS 118

Query: 103 QETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLE 158
              F     + G  + V    + VDP GR   +     + +V    R++ A        E
Sbjct: 119 LHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGE 178

Query: 159 AHKSHTIVYSICGI-----------DCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNL 207
             +S  +   I  +           D  F +  +    L   E +Q   G+ A   Q   
Sbjct: 179 GQRSSFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 237

Query: 208 TFYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        WS    P D    + V  P GG     V++ A N ++Y NQ  
Sbjct: 238 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGG-----VVIFAVNSLLYLNQSV 292

Query: 263 PDVRAVIPRRA------DLPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 293 PPYGVALNSLTLGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 352

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +ST
Sbjct: 353 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PAST 406

Query: 373 LMETEEGFQPVFFQPR--------GLKNLVR--IEQVE---------------------- 400
           + E  +  +P   + R        G K + +  ++++E                      
Sbjct: 407 VREAADKEEPPSKKKRVDSTAGWAGSKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDS 466

Query: 401 --SLMPIMDMRI---ANLFEEEAPQ----IFTLCGRGPRSSLRILRPGLAVSEMAVSQLP 451
             ++ P  +  +   A L EE +P+    I    G G   +L +L+  +    +   +LP
Sbjct: 467 MLNIGPCANAAVGEPAFLSEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELP 526

Query: 452 GVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSIGE 487
           G    +WTV   V  E +                         ++++S  ++T++L  G+
Sbjct: 527 GC-YDMWTVIAPVRKEEEETPKAEGSEQEPSAPEAEDDGRRHGFLILSREDSTMILQTGQ 585

Query: 488 TVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
            + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 586 EIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 622


>gi|342181720|emb|CCC91200.1| putative damage-specific DNA binding protein [Trypanosoma congolense
            IL3000]
          Length = 1274

 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 99/261 (37%), Gaps = 42/261 (16%)

Query: 930  EGKSLELLHKTQVEGIPLALC---QFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNT 986
            E  +L L  +T VEG     C    + GR+  GI   + L+           E  +   T
Sbjct: 886  ERATLRLQGRTDVEGALQCCCSVPNYAGRIALGISGCVALFSWNPADSTFVPEETIRVGT 945

Query: 987  IVS-----INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDF--- 1038
            IV+     +      I   D++ S  F +    +  L I A D   R +     I +   
Sbjct: 946  IVTRIVPTVQGDTSYIVACDVRHSCFFIRVDTIQGSLSIAARDPELRGVMDGTVIQYPSH 1005

Query: 1039 -DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDV 1097
             DT    D F N + V      +D  E  P+    +           ++    Q+H+GD+
Sbjct: 1006 HDTCFADDCF-NFFSVSHTTPSTDSSEPPPSTITTQ-----------RLRTTAQYHIGDL 1053

Query: 1098 VTSLQKAS----------------LVPG-GGESVIYGTVMGSLGAMLAFSSRDDVDFFSH 1140
            +T++Q+ S                LVPG  G  + YGT  G+ G +   ++   +     
Sbjct: 1054 ITAMQQGSFAPCSVINDFVPVPMALVPGVCGPQIAYGTSHGAFGTITPVTNETFL-LLKS 1112

Query: 1141 LEMHMRQEHPPLCGRDHMAYR 1161
            +E+ +    PPL G  H +YR
Sbjct: 1113 IEISVAAVLPPLGGFCHSSYR 1133


>gi|154286506|ref|XP_001544048.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150407689|gb|EDN03230.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1158

 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 114/547 (20%), Positives = 208/547 (38%), Gaps = 94/547 (17%)

Query: 225 EPVDNGANMLVTVPGGGDGP-SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLI 283
           E ++ GA+ LV VP     P  G+LV  E  + Y +    +  +   + A       + +
Sbjct: 249 EELEMGASFLVPVPA----PLGGLLVLGETSIRYLDDASNECISQPLKEAT------IFV 298

Query: 284 VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKSGY 342
                  Q+    +LL  +YG +F + L  D ++ V   K+     IP  + +  +  G 
Sbjct: 299 AWEQVDGQR----WLLADDYGRLFFLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGGGI 354

Query: 343 LFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESL 402
            F  S  G+  L +                   TE  F+              I+   ++
Sbjct: 355 TFIGSHQGDPELIRI------------------TEGSFEV-------------IQTFANI 383

Query: 403 MPIMDMRIANL------------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
            PI+D  I +L            F     +I T  G     SLR +R G+ + E+ V   
Sbjct: 384 APILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRTVRSGVGMEEVGVLGA 443

Query: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTTPSLAVS 507
               + +W ++     EF   ++VSF + T V      GE  E+    G      +L  +
Sbjct: 444 MKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGEVEEKEEFMGLGLAESTLLAA 503

Query: 508 LIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYF- 564
            +    ++QV    +R    DG   I EW    ++ I    SN   +V+ + G  L+ F 
Sbjct: 504 NLPHGRILQVTEWNVRVAELDGGMVIWEWSPEQQKAITAASSNDDHLVLMVGGQVLMIFD 563

Query: 565 ---EVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDC 621
              ++++TG+    +       V+ + + + P    R+  L +     T  ++ +   D 
Sbjct: 564 IRGDINITGE----KDFGFDTQVSGVTVTTSP---VRACILCL---PQTAEVVVMSLSD- 612

Query: 622 MQILSVQSVSSP----PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMV 677
           + I    S+  P    P S+L  EV         +++PA+LF++  + +G +F    ++ 
Sbjct: 613 LAIRRSTSLGEPGDAVPRSVLVAEVL--------SNNPATLFVS--MADGSVFSFSFNLE 662

Query: 678 TGQLSDSRSRFLGLRPPKLFSVVVG-GRAAMLCLSSRPWLGYIHRGRFLLTPLSYETLEY 736
              L+      LG   P    +  G G   +     +P L Y   GR + + ++      
Sbjct: 663 DFSLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPRLIYAVEGRIVYSAVNSGLASR 722

Query: 737 AASFSSD 743
              F+S+
Sbjct: 723 ICHFNSE 729


>gi|195485994|ref|XP_002091320.1| GE12310 [Drosophila yakuba]
 gi|194177421|gb|EDW91032.1| GE12310 [Drosophila yakuba]
          Length = 1455

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 162/430 (37%), Gaps = 56/430 (13%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           R+E L +  ++G + SL    L G+ +D +++     ++ +L+++P       +    F 
Sbjct: 67  RLECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFE 126

Query: 108 KSGCRRIVPGQYLA----VDPKGRAVMIGACEKQKLVYVLNRDTAA-RLTISSPLEAHKS 162
           +   R    G+Y      VDP  R  ++    K+ +V    +D +   + ++      K+
Sbjct: 127 EDDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKA 186

Query: 163 HTIVYSICGIDCGF-------DNPIFAAIELDYSEADQDSTGQAASEAQKNL-------- 207
            T + S   I   +       D  I   +++ +     + T     E  +          
Sbjct: 187 PTAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRS 246

Query: 208 -TFYELDLGLNHVSRK----W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKN 259
            T   + + LN   R     W   S P D      +  P GG      LV   N VIY N
Sbjct: 247 DTCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGG-----CLVMTVNAVIYLN 301

Query: 260 QGHPDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLE 312
           Q  P     +   AD      L  + GV I +  A      +   ++    GD++ +TL 
Sbjct: 302 QSVPPYGVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVDKLVISLRTGDLYVLTLC 361

Query: 313 HDN-EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSS 371
            D+   V            +T+ +CVL S Y+F  S  GN  L  F         E   S
Sbjct: 362 VDSMRTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLLHF--------TEEDQS 413

Query: 372 TLMETEEGFQPVFFQPRGL----KNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGR 427
           T++  ++  Q    Q R L    +NL  I  V+ L        +   E+E  +++   G 
Sbjct: 414 TVITLDDVEQQTEQQQRNLQDEDQNLEEIFDVDQLEMAPTQAKSRRIEDEELEVY---GT 470

Query: 428 GPRSSLRILR 437
           G ++S+  LR
Sbjct: 471 GAKASVLQLR 480



 Score = 43.9 bits (102), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 32/155 (20%)

Query: 457 VWTV------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
           VWTV      K + ND+ D ++++S  N+TLVL  G+ + E+ ++GF    P++ V  +G
Sbjct: 563 VWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTGQEINEIENTGFTVNQPTIFVGNLG 621

Query: 511 DDS-LMQVHPSGIRHIREDGRINEWRTPGKRTI----VKVGSNRLQVVIA-------LSG 558
               ++QV     RH+R           G R I    + VGS  +QV IA       +  
Sbjct: 622 QQRFIVQV---TTRHVR--------LLQGTRLIQNVPIDVGSPVVQVSIADPYVCLRVLN 670

Query: 559 GELIYFEVDMT--GQLLEVEKHEMSGDVACLDIAS 591
           G++I   +  T     L + KH +S   A + I++
Sbjct: 671 GQVITLALRETRGTPRLAINKHTISSSPAVVAISA 705


>gi|119191318|ref|XP_001246265.1| hypothetical protein CIMG_00036 [Coccidioides immitis RS]
          Length = 1072

 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 129/634 (20%), Positives = 227/634 (35%), Gaps = 101/634 (15%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   L   + +  AI   F       +VVA+   LE   P   G +    +  I+G I  
Sbjct: 3   YITPLHHASSVDNAIKLQFMNPGEDCLVVAKSNRLEFYLPTPDG-LSLQHAKAIYGKISV 61

Query: 64  LAQF-RLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET----FGKSGCRRIVPGQ 118
           L +  R   S  D + VG+D      L ++PS     ++H E           R    G 
Sbjct: 62  LQKVPRSHSSATDLLFVGTDRYAYFTLSWDPSTC---QLHTEQKYLDIADPSLRDNQSGD 118

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISS---------------PLEAHKSH 163
              VDP G+ + +   E    V  + ++   R + S+               PL+     
Sbjct: 119 RSWVDPSGKFLTMEIYEGIISVIPIAQEPLKRPSPSAGRSSGTSEQREYLGEPLQTRIEE 178

Query: 164 TIVYSICGIDCGFDNPIFAAIELDYSEADQD--------STGQAASEAQKNLTFYELDLG 215
            IV S   +      P   AI  + ++            S G    EA     F ++D  
Sbjct: 179 LIVRSTAFLHHDPTKPPRIAILYENTQGKVKLKLRDLIYSRGIPGGEASAA-EFRDVD-- 235

Query: 216 LNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL 275
                    + ++ GA++LV VP       GVL+  E F+ Y       +  V       
Sbjct: 236 ------DLYDDLELGADILVPVPLP---LGGVLILGEKFIKY-------IDTVKNETITR 279

Query: 276 PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTAS 334
           P E   + V+      +    +LL  +YG +F   L  ++ + V   K+         ++
Sbjct: 280 PLEHNTIFVAWEQLDNQR---WLLADDYGRLFFFMLILNSANAVQSWKVGLLGETSRASA 336

Query: 335 MCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLV 394
           +  L  G +F  S  G+                  S  +  TE  F+             
Sbjct: 337 LVHLGGGVVFLGSHQGD------------------SHVIRITEGSFE------------- 365

Query: 395 RIEQVESLMPIMDMRIANL----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSE 444
            I+ + ++ PI+D  + +L          F     +I T  G     SLR +R G+ + +
Sbjct: 366 IIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGAFRDGSLRSVRSGVGMED 425

Query: 445 MAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTT 501
           + V       + +W +     + F   +++SF + + V      GE  E+    G L   
Sbjct: 426 LGVLGAMEHITDLWGLSAFCPEGFCDTLLLSFVDESRVFHFSPDGEVEEKDDFLGLLLGE 485

Query: 502 PSLAVSLIGDDSLMQVHPSGIRHIREDGRIN--EWRTPGKRTIVKVGSNRLQVVIALSGG 559
           P++  + +    ++QV   G R    + R+   EW     R I    SN   +V+ + G 
Sbjct: 486 PTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVESRKITAASSNDRHLVLMVGGQ 545

Query: 560 ELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVP 593
           +L+ F++    ++   +  E    V+ + + S P
Sbjct: 546 KLMVFDIGDDIKMSSTKTFEADKQVSGVALTSSP 579


>gi|195381337|ref|XP_002049409.1| GJ21566 [Drosophila virilis]
 gi|194144206|gb|EDW60602.1| GJ21566 [Drosophila virilis]
          Length = 1420

 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 81/388 (20%), Positives = 146/388 (37%), Gaps = 54/388 (13%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           R+E L S  ++G + SL    L G  +D +++     ++ +L+ +        +    F 
Sbjct: 67  RLECLASYSLYGNVMSLQSVSLAGGMRDALLISFKDAKLSVLQLDADTQALKTLSLHYFE 126

Query: 108 KSGCRRIVPGQY----LAVDPKGRAVMIGACEKQKLVYVLNRDTA---ARLTISSPLEAH 160
           +   R    G+Y    + VDP  R  ++    K+ +V    +D +     L    P++  
Sbjct: 127 EEDIRGGWTGRYHVPVVRVDPDARCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKA 186

Query: 161 KSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVS 220
            +  +  +          PI A+  +  + AD D       + Q    +YE  L + +  
Sbjct: 187 PTAMVTRT----------PIMASYLI--ALADLDEKLDNVLDIQFLHGYYEPTLLILY-- 232

Query: 221 RKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD------ 274
               EPV   A  +   P       G LV   N +IY NQ  P     +   AD      
Sbjct: 233 ----EPVRTCAGRIKVFP-IQKPIGGCLVMTVNAIIYLNQSVPPYGVSLNSSADNSTSFP 287

Query: 275 -LPAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN-EHVSELKIKYFDTIPVT 332
             P +   L +  A      +   ++    GD++ +TL  D+   V            +T
Sbjct: 288 LKPQDNVRLSLDCANFAFIDVDKLVISLRTGDLYVLTLCVDSMRTVRNFHFHKAAASVLT 347

Query: 333 ASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKN 392
           + +CV  + Y+F  S  GN  L  F         E   ST++  ++           ++N
Sbjct: 348 SCICVCHTEYIFLGSRLGNSLLLHF--------TEEDQSTVITLDD-----------MEN 388

Query: 393 LVRIEQVESLMPIMD-MRIANLFEEEAP 419
            V  + VE   P +D  ++ ++ + EAP
Sbjct: 389 AVEQQAVEQAPPQLDEEQVYDVDQHEAP 416


>gi|353442065|gb|AER00318.1| xeroderma pigmentosum group E, partial [Hydra vulgaris]
          Length = 156

 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 36/175 (20%)

Query: 1027 PRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKM 1086
            P W+TA   ID DT  GA+   N++  +  +D S   +E+                 + +
Sbjct: 1    PNWMTAVEIIDDDTFLGAENSFNLFICQ--KDNSSVNDEE----------------RHHL 42

Query: 1087 EEIVQFHVGDVVTSLQKASLVPGG--------GESVIYGTVMGSLGAMLAFSSRDDVDFF 1138
            + I ++H+GD V   +  SLV             S++YGTV G++G ++A   ++  DF 
Sbjct: 43   QTIGKYHLGDFVNVFKHGSLVMHHSTEQLTPISSSILYGTVRGAIG-LVAGLPKNTFDFL 101

Query: 1139 SHLEMHMRQEHPPLCGRDHMAYRSAYFPVKD-----VIDGDLCEQFPTLSLDLQR 1188
            S ++  + +    +   +H  +RS Y   K       +DGDL E      LDL R
Sbjct: 102  SQVQEKLSKTIKSVGKIEHEFWRSFYNDKKTDLAVGCVDGDLIES----CLDLTR 152


>gi|9794908|gb|AAF98388.1| cleavage and polyadenylation specificity factor [Drosophila
            melanogaster]
          Length = 813

 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 94/475 (19%), Positives = 184/475 (38%), Gaps = 95/475 (20%)

Query: 774  LPLRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNGNMDQMEN 833
            +PLR TPR+ V   + ++  +I   +  +T   R                         N
Sbjct: 387  VPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYR------------------------FN 422

Query: 834  GDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRS----ANTTCLLELQDNEAAFSICT 889
            G+D+   +   DE++ YP     + V    ++ P +     + +   E  ++  AF I  
Sbjct: 423  GEDKELSEESRDERFIYPIGSQFEMV----LISPETWEIVPDASITFEPWEHVTAFKIVK 478

Query: 890  VNFHDKEHGT--LLAVGTAKGLQFWPKRNIVA-GYIHIYRFV----EEGKSLELLHKTQV 942
            +++     G    L +GT     F    +I + G IHIY  +    E GK +      ++
Sbjct: 479  LSYEGTRSGLKEYLCIGT----NFNYSEDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEI 534

Query: 943  -----EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC--ENKLFPNTIVSINTYRD 995
                 +G   A+    G L+ G+G  + ++ L    L+     +  ++ + I+++   + 
Sbjct: 535  FKKEQKGPVSAISDVLGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITV---KS 591

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAG---ADKFGNIYF 1052
             I++ D+ +S    +++ +   L + + D  P  +     +  ++  G    D   NI  
Sbjct: 592  LIFIADVYKSISLLRFQEEYRTLSLASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIV 651

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSL----------- 1101
                 +  + +     GG+             K+     +H+G VV ++           
Sbjct: 652  YMYQPEARESL-----GGQ-------------KLLRKADYHLGQVVNTMFRVQCHQKGLH 693

Query: 1102 QKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMR-QEHPPLCGRDHMAY 1160
            Q+   +      V+YGT+ G+LG  L    +    F     + +  QEH  LCG +   Y
Sbjct: 694  QRQPFLYENKHFVVYGTLDGALGYCLPLPEKVYRRFLMLQNVLLSYQEH--LCGLNPKEY 751

Query: 1161 RS-------AYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
            R+          P + +IDGDL   +  ++   + ++A ++     EIL  L EI
Sbjct: 752  RTLKSSKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIGTRTEEILGDLLEI 806


>gi|345482082|ref|XP_001607052.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Nasonia vitripennis]
          Length = 1415

 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 128/638 (20%), Positives = 232/638 (36%), Gaps = 135/638 (21%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--PE-------------- 44
           MY  S T    TG+  AI  NF       +VVA   ++ + R  P+              
Sbjct: 1   MYSISKTTHPATGVEHAITCNFFNRAEKCLVVAGANIIRVFRLIPDVDPGKKEKFTESRP 60

Query: 45  NSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQE 104
              R+E L    + G + S+   +L GS +D +++     ++ ++EY+P  +    +   
Sbjct: 61  PKMRLECLAQYTLHGNVMSMQAVQLIGSPRDSLLLSFREAKLSVVEYDPEIHSLRTVSLH 120

Query: 105 TFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDT---AARLTISSPL 157
            F     K G         + VDP+GR  ++    ++ +V    +D       L  +   
Sbjct: 121 YFEEEEIKDGWTNHHHVPIVRVDPEGRCAVMLIYGRKLVVLPFRKDPILDEGDLIENPKS 180

Query: 158 EAHK-----SHTIVYSICG------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKN 206
            +HK     S+ IV           ID  F +  +    L   E  +   G+ A   Q  
Sbjct: 181 SSHKTPILSSYMIVLKSLEEKMDNIIDLQFLHGYYEPTLLILYEPVRTFAGRIAVR-QDT 239

Query: 207 LTFYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQG 261
                + L +        WS    P D    + V  P G     G L+ A N +IY NQ 
Sbjct: 240 CAMVAISLNIQQKVHPIIWSVSNLPFDCYQAVAVKKPLG-----GTLIMAVNSLIYLNQS 294

Query: 262 HPDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFF----FLLQTEYGDIFKVTL 311
            P     +    D      L  + GV I   +    +  F      ++  + G+++ ++L
Sbjct: 295 IPPYGVSLNSLTDNCTNFPLKPQEGVKI---SLESSQVAFISPDRLVISLKTGELYVLSL 351

Query: 312 EHDNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADP--DV 366
             D+  +  ++  +FD      +T+ +C+    YLF  S  GN  L +F    ++   D+
Sbjct: 352 FADS--MRSVRGFHFDKAAASVLTSCVCLCDDNYLFLGSRLGNSLLLRFTEKESEKINDI 409

Query: 367 EASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMP--IMDMRIANLFE--------- 415
                +L  +    QP           ++++ +E  M   ++D++     E         
Sbjct: 410 SMLEMSLNSSNSQEQPT--------KKIKLDYLEDWMASDVLDIKDPEELEVYGSETQTS 461

Query: 416 -EEAPQIFTLC--------------------------------------GRGPRSSLRIL 436
            +    IF +C                                      G G   +L +L
Sbjct: 462 IQITSYIFEVCDSLLNIGPCGNISMGEPAFLSEEFSNNSEPDVELVTTSGYGKNGALCVL 521

Query: 437 RPGLAVSEMAVSQLPGVPSAVWTV---------KKNVNDEFDAYIVVSFNNATLVLSIGE 487
           +  +    +    LPG  + +WTV          K   +    +++++ +++T+VL  G+
Sbjct: 522 QRSIRPQVITTFDLPGYEN-IWTVIDSTVSDNRAKTETEGTHGFLILTQDDSTMVLQTGQ 580

Query: 488 TVEEVSD-SGF-LDTTPSLAVSLIGDDSLMQVHPSGIR 523
            + EV D SGF    T   A +L  +  ++QV   G+R
Sbjct: 581 EINEVVDQSGFSTQGTTIFAGNLGSNRYIIQVTQMGVR 618


>gi|328773280|gb|EGF83317.1| hypothetical protein BATDEDRAFT_21894 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1673

 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 13/115 (11%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVK-----------KNVNDEF 468
           +I    G GP   L IL   +    +   +LP +   +WT++               D F
Sbjct: 596 EIVAATGHGPHGHLAILNRSVRPQIVTTFELPQI-EEMWTIRCAKFDKDYRLVSEPTDAF 654

Query: 469 DAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLM-QVHPSGI 522
             Y+++S ++ T +L  GE   E+ D+ F    P++ V  + D++++ QVHP+G+
Sbjct: 655 HKYVILSHSSGTSILKAGEAFTEMDDTTFYQAGPTVGVGALLDETIIVQVHPNGV 709


>gi|392864500|gb|EAS34654.2| UV-damaged DNA binding protein [Coccidioides immitis RS]
          Length = 1144

 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 129/634 (20%), Positives = 227/634 (35%), Gaps = 101/634 (15%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   L   + +  AI   F       +VVA+   LE   P   G +    +  I+G I  
Sbjct: 3   YITPLHHASSVDNAIKLQFMNPGEDCLVVAKSNRLEFYLPTPDG-LSLQHAKAIYGKISV 61

Query: 64  LAQF-RLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET----FGKSGCRRIVPGQ 118
           L +  R   S  D + VG+D      L ++PS     ++H E           R    G 
Sbjct: 62  LQKVPRSHSSATDLLFVGTDRYAYFTLSWDPSTC---QLHTEQKYLDIADPSLRDNQSGD 118

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISS---------------PLEAHKSH 163
              VDP G+ + +   E    V  + ++   R + S+               PL+     
Sbjct: 119 RSWVDPSGKFLTMEIYEGIISVIPIAQEPLKRPSPSAGRSSGTSEQREYLGEPLQTRIEE 178

Query: 164 TIVYSICGIDCGFDNPIFAAIELDYSEADQD--------STGQAASEAQKNLTFYELDLG 215
            IV S   +      P   AI  + ++            S G    EA     F ++D  
Sbjct: 179 LIVRSTAFLHHDPTKPPRIAILYENTQGKVKLKLRDLIYSRGIPGGEASAA-EFRDVD-- 235

Query: 216 LNHVSRKWSEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADL 275
                    + ++ GA++LV VP       GVL+  E F+ Y       +  V       
Sbjct: 236 ------DLYDDLELGADILVPVPLP---LGGVLILGEKFIKY-------IDTVKNETITR 279

Query: 276 PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTAS 334
           P E   + V+      +    +LL  +YG +F   L  ++ + V   K+         ++
Sbjct: 280 PLEHNTIFVAWEQLDNQR---WLLADDYGRLFFFMLILNSANAVQSWKVGLLGETSRASA 336

Query: 335 MCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLV 394
           +  L  G +F  S  G+                  S  +  TE  F+             
Sbjct: 337 LVHLGGGVVFLGSHQGD------------------SHVIRITEGSFEI------------ 366

Query: 395 RIEQVESLMPIMDMRIANL----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSE 444
            I+ + ++ PI+D  + +L          F     +I T  G     SLR +R G+ + +
Sbjct: 367 -IQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGAFRDGSLRSVRSGVGMED 425

Query: 445 MAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTT 501
           + V       + +W +     + F   +++SF + + V      GE  E+    G L   
Sbjct: 426 LGVLGAMEHITDLWGLSAFCPEGFCDTLLLSFVDESRVFHFSPDGEVEEKDDFLGLLLGE 485

Query: 502 PSLAVSLIGDDSLMQVHPSGIRHIREDGRIN--EWRTPGKRTIVKVGSNRLQVVIALSGG 559
           P++  + +    ++QV   G R    + R+   EW     R I    SN   +V+ + G 
Sbjct: 486 PTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVESRKITAASSNDRHLVLMVGGQ 545

Query: 560 ELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVP 593
           +L+ F++    ++   +  E    V+ + + S P
Sbjct: 546 KLMVFDIGDDIKMSSTKTFEADKQVSGVALTSSP 579


>gi|390358537|ref|XP_001201130.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Strongylocentrotus purpuratus]
          Length = 283

 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 21/165 (12%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELL---------------RPEN 45
           MY +   +  PTG+   +  +F       +VVA+G  L +                +P+N
Sbjct: 1   MYAFYREIHPPTGVEHCVYCHFFSPDQQNLVVAKGSELTVYSMITVDSNKPTDKDSKPKN 60

Query: 46  SGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET 105
             ++E   +  IFG + S+   ++TGS +D +++   + ++ I+EY+P+ +    +    
Sbjct: 61  --KLEEAATFHIFGKVMSMQSAQVTGSGRDALLLSFMNAKVSIVEYDPNMHDLKTLSMHY 118

Query: 106 F----GKSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRD 146
           F     K G  R +    + VDP  R  ++     + +V    RD
Sbjct: 119 FEEDETKEGVYRNIFHPVVKVDPDHRCAIMLTYGSKLVVLPFRRD 163


>gi|392591958|gb|EIW81285.1| hypothetical protein CONPUDRAFT_56293 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 1245

 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 100/449 (22%), Positives = 170/449 (37%), Gaps = 61/449 (13%)

Query: 392 NLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLP 451
           +L  +++ +++ PI D  + +       ++ T  G     S+R++R G    E A   + 
Sbjct: 433 HLTEVDRFQNIAPIYDAALVDPDNSGQYEVVTCSGGQNTGSIRLVRSGADFQEAAA--IG 490

Query: 452 GVP--SAVWTVKKNVNDEFDAYIVVSFNNATLVLSIG--ETVEEVSDSGFL--------- 498
           G+P  + +W V+   +D    +IV S    T V  I    TV  V+DSGF+         
Sbjct: 491 GIPNITNIWPVRSLYSDPIHTHIVASTPQETYVFRIDNKHTVSHVADSGFVTGKKRTLVV 550

Query: 499 ----DTTPSLA---VSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK------------ 539
                  P  A   ++ +    ++QV    +  +  D  + E+   G             
Sbjct: 551 QNLQKKVPKEAGQGLTYMDSSLVLQVTSDELVLLNLDKGLGEFTRVGDGVCKMGQLAGGK 610

Query: 540 -----RTIVKVGSNRLQVVIALSGGELIYFE-VDMTGQLLEVEKH-EMSGDVACLDIASV 592
                R IV   +N  QVV+ LS G L      D   +L+        SG +A +   S 
Sbjct: 611 PGWIDREIVAASANASQVVLGLSFGRLAVVNFADNKFKLVGYRDFTNPSGGIAEISAVSC 670

Query: 593 PEGRKRSRF--LAVGSYDNTIR--ILSLD---PDDCMQILSVQSVSSPPESLLFLEVQAS 645
               +   F  +A  ++  T R  I+SL    P  C  +    S+ S P SLL       
Sbjct: 671 TPADQSKSFSPMAAVAFWQTHRVEIISLGSPFPTLCASV----SLPSLPRSLLM----HR 722

Query: 646 VGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSVVVGGRA 705
             GE  A+ P  L +  G  +GV+   V+      L + +   +G  P    +    GR 
Sbjct: 723 FAGE-SANAPPHLLV--GRADGVVATFVLK--DKALVEQKQIPVGNLPVTFHTCKAKGRT 777

Query: 706 AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTIERL 765
           A+    SR  + +  + R   +PL  + +  AAS  +      +V      L +  ++ L
Sbjct: 778 AVFACGSRTSVLFWEKDRLRHSPLILKEVAAAASLHTHDYRSSLVLATSEGLVIGDVQNL 837

Query: 766 GETFNETALPLRYTPRRFVLQPKKKLMVI 794
            +    +       PRR    P  K + +
Sbjct: 838 EKLHIRSIHTGLDNPRRISHSPVHKALAV 866


>gi|213407244|ref|XP_002174393.1| cleavage factor one Cft1 [Schizosaccharomyces japonicus yFS275]
 gi|212002440|gb|EEB08100.1| cleavage factor one Cft1 [Schizosaccharomyces japonicus yFS275]
          Length = 1431

 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 24/192 (12%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV--------------KKNVN 465
           ++  + G G   SL + R  ++          G  S +WT+              ++ ++
Sbjct: 526 EVTCVTGTGKSGSLVVFRRSISPVVEGKFNFEGCQS-LWTIHVTGRLKNPRSHGSERYLD 584

Query: 466 DEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAV-SLIGDDSLMQVHPSGIR- 523
           DE+D Y+VVS    + V + GET +EV DS F     ++ V  L+G   ++Q+  + +R 
Sbjct: 585 DEYDTYLVVSKEKESFVFTAGETFDEVEDSDFNTKGSTINVGGLLGGMRIVQICTTSLRV 644

Query: 524 ---HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDM-TGQLLEVEKHE 579
              +I    RIN  +   K+ +V        VV+ L GG ++ + +D  T +L++++ H+
Sbjct: 645 YDPNIHLVQRINLGK---KQNVVAASVCDPYVVLVLLGGRILLYSMDAETQRLIKMDLHK 701

Query: 580 MSGDVACLDIAS 591
              +V    + S
Sbjct: 702 QLKNVKAASLYS 713


>gi|346321204|gb|EGX90804.1| DNA damage-binding protein 1 [Cordyceps militaris CM01]
          Length = 1160

 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 167/850 (19%), Positives = 308/850 (36%), Gaps = 132/850 (15%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
           Y   +  PT I  AI   FS     +++VA+   LE+ R      +  L +  + G I  
Sbjct: 3   YIAPVHLPTSIRHAIRLQFSSPDHEDLIVAKANRLEIWRVTRED-MTCLHTKVVHGTICM 61

Query: 64  LAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSG---CRRIVPGQYL 120
           L + R   +  D + VG++  +   + +N  +N  +  H ET   +     R        
Sbjct: 62  LQRLRPKDANTDLLFVGTERLQYFNVSWNSQRNEMELTH-ETIHDTAEPYMRESQSQNKC 120

Query: 121 AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAH----------KSHTIVYSIC 170
            VDP  + +++   E    V+ L     AR  +S  LE            K    ++S  
Sbjct: 121 LVDPTAKYMVMHLWEGVLNVFRL----PARRGVSDKLEEMDQIRLTELWMKDSAFIHSRT 176

Query: 171 GIDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEPV-DN 229
           G      +P  A   L  ++ D++    A     K+    ++     H  R+  + + D 
Sbjct: 177 G------HPRIAF--LYKTQLDEEEARVAVYRLTKDDKGSDVSKFDPHKDRELDQVIADP 228

Query: 230 GANMLVTVP-------------GGGDGPSGVLVCAENFVIYKNQ-GHPDVRAVIPRRADL 275
            A+ML+ VP             G      G+LV  E  + Y +   +  V +V+    D 
Sbjct: 229 CASMLIPVPVAEEKRYHVRNNEGTRAHLGGLLVVGETLLTYFDSLTYSSVSSVL----DE 284

Query: 276 PAERGVLIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH----VSELKI---KYFDT 328
           P       +   TH       + L  +YG +  +TL+  +E     V+ + +   K+ D+
Sbjct: 285 PKIYVAWAMYDETH-------YFLADDYGRLDLLTLQTHSEQTGVVVNRMTVEPLKFPDS 337

Query: 329 IPVTA---SMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFF 385
             +T+   S+  +  G L  AS  G+  L Q        D+++ +   ++      P+  
Sbjct: 338 KNLTSRASSLVYMGGGMLVVASHHGDSQLLQI-------DIDSRTMHPIKLLSNNGPILD 390

Query: 386 QPRGLKNLVRIEQVESLMPIMDM-------RIANLFEEEAPQIFTLCGRGPRSSLRILRP 438
                              IMDM          NLF     +I   CG     SLR +R 
Sbjct: 391 -----------------FAIMDMGNRDGDNLQGNLFSSGQARIVAGCGAYRDGSLRSIRS 433

Query: 439 GLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS-FNNATLVLSIGETVEEVSD-SG 496
           G+ + ++ + +       ++T+K   + + D  +     +    +      ++EV++  G
Sbjct: 434 GVGLEDLGILEEIKNTRRLFTIKSRRSKKVDTLVACYILDTRVFLFGADGDIQEVNNFPG 493

Query: 497 FLDTTPSLAVSLIGDDSLMQV--HPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVI 554
                 SL V  + +  L+QV      I+   E  +   W  PG   I     N   +++
Sbjct: 494 LNLRVESLLVVNLPNGRLLQVTRMDVTIKDPNEQAKALRWVAPGA-NITSASCNGKWILL 552

Query: 555 ALSGGELIYFEVD-----MTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVG-SYD 608
            + G +++   +D        Q    +    S  V+CL  ++  +      +  +G  Y 
Sbjct: 553 CVDGSKIVSLNIDKNLEACVQQYQGADDSNQSNQVSCLHASTTFQD-----YGVIGWWYP 607

Query: 609 NTIRILSLDPDDCMQILSVQSVS---SPPESLLFLEVQASVGGEDGADHPASLFLNAGLQ 665
             I I+ L       + ++Q  +   S P  +  +++           H +   L   L+
Sbjct: 608 GRITIIDLATLSAKHVETLQQTTDAASVPRDISLVQLHPR--------HASGPTLLVALE 659

Query: 666 NG--VLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV-VVGGRAAMLCLSSRPWLGYIHRG 722
           +G  + F    D+    LS  +   LG  P  L  +    G + +   +    L Y   G
Sbjct: 660 DGTVITFNVSEDLT---LSGKKRVTLGSSPACLHVLPEADGTSKIFATTENASLIYSSEG 716

Query: 723 RFLLTPLSYETLEYAASFSSDQCVEGVVSVAGNALRVFTI--ERLGETFNETALPLRYTP 780
           R + +  + +       F S+     ++      +R+  I  ERL       +LP+  T 
Sbjct: 717 RIIYSATTADDATCVVPFDSEAFPNSILLSTDKHVRLCHIDKERLTHV---KSLPVYETV 773

Query: 781 RRFVLQPKKK 790
           RR    P  K
Sbjct: 774 RRVAYAPGVK 783


>gi|195583398|ref|XP_002081509.1| GD25678 [Drosophila simulans]
 gi|194193518|gb|EDX07094.1| GD25678 [Drosophila simulans]
          Length = 1450

 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 93/430 (21%), Positives = 162/430 (37%), Gaps = 56/430 (13%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           R+E L +  ++G + SL    L G+ +D +++     ++ +L+++P       +    F 
Sbjct: 67  RLECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFE 126

Query: 108 KSGCRRIVPGQYLA----VDPKGRAVMIGACEKQKLVYVLNRDTAA-RLTISSPLEAHKS 162
           +   R    G+Y      VDP  R  ++    K+ +V    +D +   + ++      K+
Sbjct: 127 EDDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKA 186

Query: 163 HTIVYSICGIDCGF-------DNPIFAAIELDYSEADQDSTGQAASEAQKNL-------- 207
            T + S   I   +       D  I   +++ +     + T     E  +          
Sbjct: 187 PTAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRS 246

Query: 208 -TFYELDLGLNHVSRK----W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKN 259
            T   + + LN   R     W   S P D      +  P GG      LV   N VIY N
Sbjct: 247 DTCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGG-----CLVMTVNAVIYLN 301

Query: 260 QGHPDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLE 312
           Q  P     +   AD      L  + GV I +  A      +   ++    GD++ +TL 
Sbjct: 302 QSVPPYGVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVDKLVISLRTGDLYVLTLC 361

Query: 313 HDN-EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSS 371
            D+   V            +T+ +CVL S Y+F  S  GN  L  F         E   S
Sbjct: 362 VDSMRTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLLHF--------TEEDQS 413

Query: 372 TLMETEEGFQPVFFQPRGLKN----LVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGR 427
           T++  ++  Q    Q R L++    L  I  V+ L        +   E+E  +++   G 
Sbjct: 414 TVITLDDVEQQTEQQQRNLQDEDQSLEEILDVDQLEMAPTQAKSRRIEDEELEVY---GS 470

Query: 428 GPRSSLRILR 437
           G ++S+  LR
Sbjct: 471 GAKASVLQLR 480



 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 32/155 (20%)

Query: 457 VWTV------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
           VWTV      K + ND+ D ++++S  N+TLVL  G+ + E+ ++GF    P++ V  +G
Sbjct: 563 VWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTGQEINEIENTGFTVNQPTIFVGNLG 621

Query: 511 DDS-LMQVHPSGIRHIREDGRINEWRTPGKRTI----VKVGSNRLQVVIA-------LSG 558
               ++QV     RH+R           G R I    + VGS  +QV IA       +  
Sbjct: 622 QQRFIVQV---TTRHVR--------LLQGTRLIQNVPIDVGSPVVQVSIADPYVCLRVLN 670

Query: 559 GELIYFEVDMT--GQLLEVEKHEMSGDVACLDIAS 591
           G++I   +  T     L + KH +S   A + I++
Sbjct: 671 GQVITLALRETRGTPRLAINKHTISSSPAVVAISA 705


>gi|393243160|gb|EJD50676.1| hypothetical protein AURDEDRAFT_112250 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1140

 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 147/359 (40%), Gaps = 69/359 (19%)

Query: 854  ESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTA--KGLQF 911
            E +   S  ++L+  + +T   ++L DNE   S+ ++    +    +  VGTA  K  + 
Sbjct: 775  EPESVTSSFKILNQDTFDTLSSMQLDDNEEITSVASLPIMPESRTEMFVVGTAYIKDSEM 834

Query: 912  WPKRNIVAGYIHIYRFVEEGKS--LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDL 969
             P R    G I ++  +E+  +    L    QV G  L+L    G ++AG+   + LY+L
Sbjct: 835  EPSR----GRILVFGSLEDSGTGGSWLTAFLQVTGAVLSLTSVDGLIVAGVNTAVILYEL 890

Query: 970  GKKRL----------LRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLY 1019
             +  L          LR+ +       + S+    D IY+GD   S    +++ +   L+
Sbjct: 891  RRNTLSEAERASHLTLRQKKEWNHNYVVTSLAARGDTIYIGDSVASIAILRWKHE--TLH 948

Query: 1020 IFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL 1079
              A    P +  A      D M+     G++    +  ++    +E PT  K+     ++
Sbjct: 949  TIARHFGPIFPLA-----LDVMSS----GSVITANIDYNLHTFHQESPTDRKL-----EI 994

Query: 1080 NGAPNKMEEIVQFHVGDVVTSLQKASL-VPGGGESV----IYGTVMGSLGAMLAFSSRDD 1134
            +G+         +H+GD V       L  P  G S+    ++ T +G +G ++A + +D 
Sbjct: 995  DGS---------YHLGDQVNKFIPGRLSAPTVGASIVLEQVFVTSLGRIG-IVAEADKDA 1044

Query: 1135 VDFFSHLEMHM--------------RQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQF 1179
                S LE ++              R  H      D  A RSA     + IDGD+ E+F
Sbjct: 1045 SWALSALERNIEKVLDQGAPKHDLWRAPHSEHGVSD--AQRSA----ANFIDGDMLERF 1097



 Score = 42.0 bits (97), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 57/280 (20%), Positives = 116/280 (41%), Gaps = 37/280 (13%)

Query: 297 FLLQTEYGDIFKVTLE-HDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALY 355
            L+   YG +  VT+  ++N   +   +    T P T +   L +G L+  S FG+  L 
Sbjct: 295 ILIGDAYGRLVLVTVSLNENAAFTISPVLLGQTSPAT-TFTYLDNGILYVGSHFGDSQLV 353

Query: 356 QFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIANLFE 415
           +              ST  +    +  V            ++   +L PI+D  I ++ +
Sbjct: 354 RL-------------STAADASGSYISV------------VKAYSNLAPIVDAVIVDIND 388

Query: 416 EEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475
              PQ+ T  G     SLR+++    + ++A+         ++ ++ + + + D  ++VS
Sbjct: 389 SNQPQVVTCSGGYNTGSLRVVQKSAELEQLAIIDAFPHTENIFPLRASSDAKEDTRMLVS 448

Query: 476 FNNATLVLSIGETVEEVSDSGFLDTTPSLAVS-LIGDDS-----LMQVHPSGIRHIRE-- 527
            +  T  +++      V +S F+   P+LA S  +  D      ++Q+    +  +    
Sbjct: 449 SHMDTKFVNLEGEDLSVEESPFVTREPTLAASNFVHKDQVETPYVLQITTKRVVLVNTVV 508

Query: 528 DGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVD 567
           D  I+    P    I+    +R Q ++ALS G L+Y  ++
Sbjct: 509 DMEIHSHEYP--EGIMLASCSRTQALLALSDGALVYIRLE 546


>gi|348679545|gb|EGZ19361.1| putative cleavage and polyadenylation specificity factor CPSF
            [Phytophthora sojae]
          Length = 1752

 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 30/186 (16%)

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC---ENKLFPNTIVSINTYRD 995
            K   +G   ++ Q    +LA +G  L +Y+   ++L+  C   + ++F   IV++N  +D
Sbjct: 1461 KEHRQGAISSVVQLGPYVLAAVGSKLIVYEFKSEQLI-GCAFYDAQMF---IVTLNVVKD 1516

Query: 996  RIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD---TMAGADKFGNIYF 1052
             +  GD+ +S HF ++R  + QL + A D  P  ++A     F+    +   D   N++ 
Sbjct: 1517 FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHV 1576

Query: 1053 VRL-PQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGG 1111
            ++  PQD+      +  GG+             ++  +  FH+G  V S+ +  +   GG
Sbjct: 1577 MQFAPQDI------ESRGGQ-------------RLLRVSDFHLGVQVASMFRKRVDGPGG 1617

Query: 1112 ESVIYG 1117
               + G
Sbjct: 1618 HVAVNG 1623



 Score = 40.8 bits (94), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 456 AVWTV--------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVS-DSGFLDTTPSLAV 506
           A+WTV        K +    ++AY+++S  + T+VL  GE +E +  DSGF  + P+LA 
Sbjct: 675 AMWTVSSSLPSATKSSDGRSYNAYLILSVAHRTMVLRTGEGMEPLEDDSGFYTSGPTLAA 734

Query: 507 S-LIGDDSLMQVHPSGIRHIRE 527
           + L     ++Q+   G R + E
Sbjct: 735 ANLFNKQRIVQIFKQGARVMME 756


>gi|195334368|ref|XP_002033855.1| GM20208 [Drosophila sechellia]
 gi|194125825|gb|EDW47868.1| GM20208 [Drosophila sechellia]
          Length = 1455

 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 93/430 (21%), Positives = 162/430 (37%), Gaps = 56/430 (13%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           R+E L +  ++G + SL    L G+ +D +++     ++ +L+++P       +    F 
Sbjct: 67  RLECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFE 126

Query: 108 KSGCRRIVPGQYLA----VDPKGRAVMIGACEKQKLVYVLNRDTAA-RLTISSPLEAHKS 162
           +   R    G+Y      VDP  R  ++    K+ +V    +D +   + ++      K+
Sbjct: 127 EDDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKA 186

Query: 163 HTIVYSICGIDCGF-------DNPIFAAIELDYSEADQDSTGQAASEAQKNL-------- 207
            T + S   I   +       D  I   +++ +     + T     E  +          
Sbjct: 187 PTAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRS 246

Query: 208 -TFYELDLGLNHVSRK----W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKN 259
            T   + + LN   R     W   S P D      +  P GG      LV   N VIY N
Sbjct: 247 DTCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGG-----CLVMTVNAVIYLN 301

Query: 260 QGHPDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLE 312
           Q  P     +   AD      L  + GV I +  A      +   ++    GD++ +TL 
Sbjct: 302 QSVPPYGVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVDKLVISLRTGDLYVLTLC 361

Query: 313 HDN-EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSS 371
            D+   V            +T+ +CVL S Y+F  S  GN  L  F         E   S
Sbjct: 362 VDSMRTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLLHF--------TEEDQS 413

Query: 372 TLMETEEGFQPVFFQPRGL----KNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGR 427
           T++  ++  Q    Q R L    +NL  I  V+ +        +   E+E  +++   G 
Sbjct: 414 TVITLDDVEQQSEQQQRNLQDEDQNLEEIFDVDQVEMAPTQAKSRRIEDEELEVY---GS 470

Query: 428 GPRSSLRILR 437
           G ++S+  LR
Sbjct: 471 GAKASVLQLR 480



 Score = 43.1 bits (100), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 32/155 (20%)

Query: 457 VWTV------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
           VWTV      K + ND+ D ++ +S  N+TLVL  G+ + E+ ++GF    P++ V  +G
Sbjct: 563 VWTVFDDATKKSSRNDQHD-FMFLSQRNSTLVLQTGQEINEIENTGFTVNQPTIFVGNLG 621

Query: 511 DDS-LMQVHPSGIRHIREDGRINEWRTPGKRTI----VKVGSNRLQVVIA-------LSG 558
               ++QV     RH+R           G R I    + VGS  +QV IA       +  
Sbjct: 622 QQRFIVQV---TTRHVR--------LLQGTRLIQNVPIDVGSPVVQVSIADPYVCLRVLN 670

Query: 559 GELIYFEVDMT--GQLLEVEKHEMSGDVACLDIAS 591
           G++I   +  T     L + KH +S   A + I++
Sbjct: 671 GQVITLALRETRGTPRLAINKHTISSSPAVVAISA 705


>gi|194883064|ref|XP_001975624.1| GG22421 [Drosophila erecta]
 gi|190658811|gb|EDV56024.1| GG22421 [Drosophila erecta]
          Length = 1455

 Score = 49.7 bits (117), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 92/432 (21%), Positives = 165/432 (38%), Gaps = 60/432 (13%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           R+E L +  ++G + SL    L G+ +D +++     ++ +L+++P       +    F 
Sbjct: 67  RLECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFE 126

Query: 108 KSGCRRIVPGQYLA----VDPKGRAVMIGACEKQKLVYVLNRDTAA-RLTISSPLEAHKS 162
           +   R    G+Y      VDP  R  ++    K+ +V    +D +   + ++      K+
Sbjct: 127 EDDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKA 186

Query: 163 HTIVYSICGIDCGF-------DNPIFAAIELDYSEADQDSTGQAASEAQKNL-------- 207
            T + S   I   +       D  I   +++ +     + T     E  +          
Sbjct: 187 PTAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRS 246

Query: 208 -TFYELDLGLNHVSRK----W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKN 259
            T   + + LN   R     W   S P D      +  P GG      LV   N VIY N
Sbjct: 247 DTCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGG-----CLVMTVNAVIYLN 301

Query: 260 QGHPDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLE 312
           Q  P     +   AD      L  + GV I +  A      +   ++    GD++ +TL 
Sbjct: 302 QSVPPYGVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVDKLVISLRTGDLYVLTLC 361

Query: 313 HDN-EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSS 371
            D+   V            +T+ +CVL S Y+F  S  GN  L  F         E   S
Sbjct: 362 VDSMRTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLLHF--------TEEDQS 413

Query: 372 TLMETEEGFQPVFFQPRGLKNLVRIEQVESLMPIMDMRIA------NLFEEEAPQIFTLC 425
           T++  ++  Q    Q R L++  +I  +E +  +  + +A         E+E  +++   
Sbjct: 414 TVITLDDVEQQTEQQQRNLQDEEQI--MEEIFDVDQLEMAPTQAKSRRIEDEELEVY--- 468

Query: 426 GRGPRSSLRILR 437
           G G ++S+  LR
Sbjct: 469 GSGAKASVLQLR 480



 Score = 44.7 bits (104), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 32/155 (20%)

Query: 457 VWTV------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
           VWTV      K + ND+ D ++++S  N+TLVL  G+ + E+ ++GF    P++ V  +G
Sbjct: 563 VWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTGQEINEIENTGFTVNQPTIFVGNLG 621

Query: 511 DDS-LMQVHPSGIRHIREDGRINEWRTPGKRTI----VKVGSNRLQVVIA-------LSG 558
               ++QV     RH+R           G R I    ++VGS  +QV IA       +  
Sbjct: 622 QQRFIVQV---TTRHVR--------LLQGTRLIQNVPIEVGSPVVQVSIADPYVCLRVLN 670

Query: 559 GELIYFEVDMT--GQLLEVEKHEMSGDVACLDIAS 591
           G++I   +  T     L + KH +S   A + I++
Sbjct: 671 GQVITLALRETRGTPRLAINKHTISSSPAVVAISA 705


>gi|38014465|gb|AAH60475.1| LOC398931 protein, partial [Xenopus laevis]
          Length = 363

 Score = 49.7 bits (117), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 112/300 (37%), Gaps = 43/300 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPE---------------- 44
           MY        PTG+  +++ NF       +VVA    L + R                  
Sbjct: 1   MYAVYRQAHPPTGLEFSMSCNFFNNSERNLVVAGTSQLYVYRLNPSSESSSKGESVSEVK 60

Query: 45  -NSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
            +  ++E + S   FG I S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  GHKEKLELMASFSFFGNIMSMASVQLAGAKRDALLLSFKEAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR  ++     Q +V    RDT A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHIPKVRVDPSGRCAVMLIYGTQLVVLPFRRDTLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            KS  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QKSSFLPSYIIDVRELDEKLLNIIDMQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV++ A N ++Y NQ  P
Sbjct: 240 IVAISLNIMQKVHPIIWSLNSLPYDCTQALAVPKPVG-----GVVIFAVNSLLYLNQSVP 294


>gi|302423344|ref|XP_003009502.1| DNA damage-binding protein 1b [Verticillium albo-atrum VaMs.102]
 gi|261352648|gb|EEY15076.1| DNA damage-binding protein 1b [Verticillium albo-atrum VaMs.102]
          Length = 1119

 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 126/311 (40%), Gaps = 40/311 (12%)

Query: 246 GVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYGD 305
           G++V  E  +IY +      +  I +  D P     + VS A +    +  +LL  +YG+
Sbjct: 258 GLIVAGETMLIYVDTL---TKVKISKALDEPR----IFVSWAKY---DVTRYLLADDYGN 307

Query: 306 IFKVTLEHDNEHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPD 365
           +  +TLE D   V+ L +K        + +  + +  LF  S  G+  L+         D
Sbjct: 308 LHLLTLEVDGVIVTGLSLKTIGKTSRASCLVYMGNEILFLGSHHGDSQLFTL-------D 360

Query: 366 VEASSSTLMETEEGFQPVF-FQPRGLKNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTL 424
           + A +  L++T     P+  F    L N              D  + N F     +I   
Sbjct: 361 LCAQTIRLIQTIPNIAPILDFSIMDLGN------------AGDSGVGNAFSSGQARIVAG 408

Query: 425 CGRGPRSSLRILRPGLAVSEMAVSQLPGVPS--AVWTVKKNVNDEFDAYIVVSFNNATLV 482
           CG     SLR +R  + + ++ +  L G+     ++++K   +++ D  +VVSF   T V
Sbjct: 409 CGVHHNGSLRSIRSSVGLEDIGI--LDGIQDVRGLFSLKSYGSEKVDT-LVVSFITETRV 465

Query: 483 LSIGE--TVEEVSD-SGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTP 537
                  +VEE++D  G     P+L    + +   +Q+  S    +  +    IN W + 
Sbjct: 466 FKFDAYGSVEELADFQGLTLDQPTLFAGSLANGHTLQITASSALLLDSESSVTINSWTSS 525

Query: 538 GKRTIVKVGSN 548
              +IV    N
Sbjct: 526 NGGSIVNASVN 536


>gi|45552619|ref|NP_995833.1| cleavage and polyadenylation specificity factor 160, isoform A
           [Drosophila melanogaster]
 gi|18203551|sp|Q9V726.1|CPSF1_DROME RecName: Full=Cleavage and polyadenylation specificity factor
           subunit 1; AltName: Full=Cleavage and polyadenylation
           specificity factor 160 kDa subunit; Short=CPSF 160 kDa
           subunit; Short=dCPSF 160
 gi|7303176|gb|AAF58240.1| cleavage and polyadenylation specificity factor 160, isoform A
           [Drosophila melanogaster]
          Length = 1455

 Score = 48.9 bits (115), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 95/430 (22%), Positives = 162/430 (37%), Gaps = 56/430 (13%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           R+E L +  ++G + SL    L G+ +D +++     ++ +L+++P       +    F 
Sbjct: 67  RLECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFE 126

Query: 108 KSGCRRIVPGQYLA----VDPKGRAVMIGACEKQKLVYVLNRDTAA-RLTISSPLEAHKS 162
           +   R    G+Y      VDP  R  ++    K+ +V    +D +   + ++      K+
Sbjct: 127 EDDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKA 186

Query: 163 HTIVYSICGIDCGF-------DNPIFAAIELDYSEADQDSTGQAASEAQKNL-------- 207
            T + S   I   +       D  I   +++ +     + T     E  +          
Sbjct: 187 PTAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRS 246

Query: 208 -TFYELDLGLNHVSRK----W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKN 259
            T   + + LN   R     W   S P D      +  P GG      LV   N VIY N
Sbjct: 247 DTCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGG-----CLVMTVNAVIYLN 301

Query: 260 QGHPDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLE 312
           Q  P     +   AD      L  + GV I +  A      +   ++    GD++ +TL 
Sbjct: 302 QSVPPYGVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVDKLVISLRTGDLYVLTLC 361

Query: 313 HDN-EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSS 371
            D+   V            +T+ +CVL S Y+F  S  GN  L  F         E   S
Sbjct: 362 VDSMRTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLLHF--------TEEDQS 413

Query: 372 TLMETEEGFQPVFFQPRGL----KNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGR 427
           T++  +E  Q    Q R L    +NL  I  V+ L        +   E+E  +++   G 
Sbjct: 414 TVITLDEVEQQSEQQQRNLQDEDQNLEEIFDVDQLEMAPTQAKSRRIEDEELEVY---GS 470

Query: 428 GPRSSLRILR 437
           G ++S+  LR
Sbjct: 471 GAKASVLQLR 480



 Score = 43.9 bits (102), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 32/155 (20%)

Query: 457 VWTV------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
           VWTV      K + ND+ D ++++S  N+TLVL  G+ + E+ ++GF    P++ V  +G
Sbjct: 563 VWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTGQEINEIENTGFTVNQPTIFVGNLG 621

Query: 511 DDS-LMQVHPSGIRHIREDGRINEWRTPGKRTI----VKVGSNRLQVVIA-------LSG 558
               ++QV     RH+R           G R I    + VGS  +QV IA       +  
Sbjct: 622 QQRFIVQV---TTRHVR--------LLQGTRLIQNVPIDVGSPVVQVSIADPYVCLRVLN 670

Query: 559 GELIYFEVDMT--GQLLEVEKHEMSGDVACLDIAS 591
           G++I   +  T     L + KH +S   A + I++
Sbjct: 671 GQVITLALRETRGTPRLAINKHTISSSPAVVAISA 705


>gi|443918546|gb|ELU38987.1| CPSF A subunit region domain-containing protein [Rhizoctonia solani
           AG-1 IA]
          Length = 1037

 Score = 48.9 bits (115), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 10/195 (5%)

Query: 394 VRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGV 453
           V +E  ++L PI+D  +  +     P+I  + G      L ++  G +  E+A+    G 
Sbjct: 283 VIVEHNKNLAPILDATLVEIDGSGQPRIALISGDESGGWLSVVHKGASFRELAILDGLGH 342

Query: 454 PSAVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETV------EEVSDSGFLDTTP-SLAV 506
              ++ +KK  ++   +Y+V S   +T +LS+ ++       EE+S     +TT  +  V
Sbjct: 343 LENIFPLKKYFDERTHSYLVASTTTSTYILSLADSSISLLSREELSGISRSETTILASNV 402

Query: 507 SLIGDDSLMQVHPSGIRHIR-EDGR-INEWRTP-GKRTIVKVGSNRLQVVIALSGGELIY 563
            L G D+ + V P  I  I    GR I+ W+ P G  T   + ++   + +A S G L  
Sbjct: 403 PLGGVDAAIHVTPQKIVLIDIITGRAISSWKPPKGDITAAALDTSSSTICVATSEGHLFS 462

Query: 564 FEVDMTGQLLEVEKH 578
             +   G L   + H
Sbjct: 463 LNIQSAGLLQTGKPH 477


>gi|303285993|ref|XP_003062286.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455803|gb|EEH53105.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1469

 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 28/154 (18%)

Query: 397 EQVESLMPIMDMRI---ANLFEE--EAPQIFTLCGRGPRSSLRILRPGLA---VSEMAVS 448
           + V  + P++D+ +   A++  +  E  ++   CG G   +L +L+ G+    V+E+   
Sbjct: 521 DSVLGISPVIDLTVGASASVSGDTIERTELIAACGHGKNGALAVLQRGIQPELVTEVESG 580

Query: 449 QLPGVPSAVWTVKKNVNDE-----------------FDAYIVVSFNNATLVLSIGETVEE 491
            LPG+    WTV  +  D                  + AY+V+S  ++T++L  GE ++E
Sbjct: 581 TLPGL-KGTWTVHHDSADNERLRGSAAAAAAQAVDPYHAYLVISLASSTMILETGEELKE 639

Query: 492 VSDSGFL--DTTPSLAVSLIGDDSLMQVHPSGIR 523
           VS+   L  D     A +  G + ++QV+  G+R
Sbjct: 640 VSEHVELVTDAATLCAGNAFGRERIVQVYDKGVR 673



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 116/535 (21%), Positives = 200/535 (37%), Gaps = 76/535 (14%)

Query: 715  WLGYIHRGRFLLTPLSYETLEYAA--SFSSDQCVEG-VVSVAGNALRVFTIERLGETFNE 771
            WL    R R L  P+  E     +  +F +  C  G ++  A   +R+  I   G    E
Sbjct: 969  WL-LARRSRVLALPVRGEAQRVVSFTAFHNVNCHAGFILGTAAGGVRICQIP--GRMHYE 1025

Query: 772  TALP-----LRYTPRRFVLQPKKKLMVIIETDQGALTAEEREAAKKECFEAAGMGENGNG 826
             A P     LR TP      P  KL  +  +        E E A+++   A  +      
Sbjct: 1026 AAWPVRKLALRCTPHHVQYLPDFKLYALSTSAPAKWV--EPEVAEEDIHAATVVKTR--- 1080

Query: 827  NMDQMENGDDENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFS 886
                M  G  E ++                     +++L P S  T     +   E   +
Sbjct: 1081 RAKAMARGGVEEQF--------------------AVKLLVPGSLETAWSRTMDPGEHVQA 1120

Query: 887  ICTVNFHDKEHGTL---LAVGTA-KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQV 942
            +  V   +   G L   LAVGTA  G +  P R  V  +   ++ V+       L     
Sbjct: 1121 VKNVQVRNLRTGALHSMLAVGTAMPGGEDTPCRGRVILFEISWQMVDGETRRVPLLLLFF 1180

Query: 943  EGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLF--PNTIVSINTYRDRIYVG 1000
            +    AL   +G L+  IG  L ++      L+       F  P   V+IN  ++ + +G
Sbjct: 1181 DDALAALSGLEGHLVVAIGTKLIVHAWDGAELI---PVAFFDTPVHTVTINVVKNFVCIG 1237

Query: 1001 DIQESFHFCKYRRD-----ENQLYIFADDSVPRWLTAAHHIDFDTMA--GADKFGNIY-F 1052
            D+Q+  +F +++ D     +N + +  D      L+    +D  T++   AD  GN Y F
Sbjct: 1238 DVQKGAYFFRWKDDPRTGEKNLIQLAKDFESMDVLSTEFLVDGSTLSLLAADTAGNAYVF 1297

Query: 1053 VRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
               P+       E   G K+  +     G+P  +  +V+F +     +       P   E
Sbjct: 1298 AYDPKS-----SESWKGQKLLTKASFHVGSP--VHRMVRFKLKTPTGAGNDGRAAPTPAE 1350

Query: 1113 --------SVIYGTVMGSLGAMLAF--SSRDDVDFFSHLEMHMRQEHPPLCGRDHMA--- 1159
                    +V +GT+ GSLG ++    S+   ++       +   ++  L GR + A   
Sbjct: 1351 IKANANRHAVFFGTLDGSLGILVPMESSTHAKLEVLQRWLNYNTAQNAGLNGRSYRAPKT 1410

Query: 1160 --YRSAYFPV-KDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 1211
               R+   P   +++DG++ + F +L+   Q + AD    T  E L  L  +  K
Sbjct: 1411 TEGRAMRSPAPHNLLDGEMLQGFESLAWTKQAEAADAAGMTREEALTYLHTLSAK 1465


>gi|313232279|emb|CBY09388.1| unnamed protein product [Oikopleura dioica]
          Length = 1451

 Score = 48.5 bits (114), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 60/156 (38%), Gaps = 30/156 (19%)

Query: 4   YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENS--------GRIETLVST 55
           Y    Q+PTG+  +   NF       + VA G +L + R  +S         R E     
Sbjct: 20  YHKESQRPTGVDESCALNFYDDGEQNLAVAAGNMLSVYRIRSSVDEAGNHFDRFELCDEF 79

Query: 56  EIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRR-- 113
           E++G +  + + RL GS +D +++  +  + VI+EY P       I    F     RR  
Sbjct: 80  ELWGIVVCMTRLRLAGSVRDSLLLSIEESKCVIVEYEPDTGSLSTISMHFFQDEDLRRGF 139

Query: 114 --------------------IVPGQYLAVDPKGRAV 129
                               +V G YLAV P  R+ 
Sbjct: 140 RKLSSMALARVDGFNRCAAVLVYGSYLAVLPFRRST 175


>gi|428186188|gb|EKX55039.1| hypothetical protein GUITHDRAFT_160593 [Guillardia theta CCMP2712]
          Length = 2290

 Score = 48.5 bits (114), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 57/287 (19%)

Query: 948  ALCQFQGRLLAGIGP--------VLRLYDLGKKRLLRKC--ENKLFPNTIVSINTYRDRI 997
            ALCQ +G LL   GP         L +Y+   ++L+ +   +  L+  T+ ++  +   I
Sbjct: 1318 ALCQLEGYLLVAQGPNPGMIGGSKLYVYEWVDEKLVGRAFFDAHLYITTLKTVKFF---I 1374

Query: 998  YVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI----DFDTMAGADKFGNIYFV 1053
              GDI+ S H  ++R D   L + A D++P  + AA  +    +F  +A  ++     FV
Sbjct: 1375 VFGDIRHSVHLLRWREDIRMLQLLAKDALPLSVYAAEFVVMGSNFGLLASDEQKNVQVFV 1434

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV---QFHVGDVVTSLQKASL---- 1106
              P                       N    + ++++     HVG  +    +  L    
Sbjct: 1435 FNP-----------------------NSPEYRRQQLICRADLHVGSHINKFIRWPLPFRP 1471

Query: 1107 VPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFP 1166
              G   +  Y T+ G +GA++    +      + L+  +    P   G +  ++R  Y P
Sbjct: 1472 TLGVRTAAHYTTLDGGIGAIIPIPEQSYRRLLA-LQNLLVTAMPHYAGLNPRSWR-LYKP 1529

Query: 1167 --------VKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKL 1205
                     K+ +DG+L  ++  L L LQ +++  L++T   IL  L
Sbjct: 1530 AMCMKRRYAKNFLDGNLLGRYLHLDLALQMQLSSALNQTREAILGDL 1576


>gi|183233163|ref|XP_654084.2| damaged DNA binding protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801703|gb|EAL48698.2| damaged DNA binding protein, putative [Entamoeba histolytica
            HM-1:IMSS]
 gi|449708240|gb|EMD47737.1| DNA-repair binding protein, putative [Entamoeba histolytica KU27]
          Length = 995

 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 156/377 (41%), Gaps = 52/377 (13%)

Query: 837  ENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE 896
            EN     +D  YG       K +  I ++D     TT  +EL+ NE A  +      D  
Sbjct: 660  ENCCKIATDGSYGLLVG---KTIKSINLIDGSFGVTT--IELKSNELALCV------DSL 708

Query: 897  HGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQG 954
               + AVGTA  +  +  P     +G I + R   EG  + ++     +G    L + Q 
Sbjct: 709  EDNIYAVGTAIIRENEIEPS----SGRILLIRQDTEG-LIYIVGTEDYDGAVYCLKKCQK 763

Query: 955  RLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRD 1014
             ++A I   + + +   K L  K +N L P   VS++  +D I  GD+  S    +YR D
Sbjct: 764  GIVAFINRNVHVIEKKGKDLNTK-QNMLLPLIGVSLDICKDYIIAGDLARSLSVYRYRND 822

Query: 1015 ENQLYIFADDSVPRWLTAAHHIDFD---TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGK 1071
               L +   D+   W +    I+ +   +   AD  GNI        + +  EE+P    
Sbjct: 823  IEHLDVVGKDNQIVWSSCVGSIESEYGTSFLVADVSGNI-------KIFNSDEEEP---- 871

Query: 1072 IKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSS 1131
             K +  K+N        I Q HV D +  +QK S   G     + G V G +  +    S
Sbjct: 872  -KTDDEKIN-------LISQVHVADSINFIQK-SFYKG----CLMGGVHGGIYNICEI-S 917

Query: 1132 RDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIA 1191
            ++   F + ++  + + +     R+ +  + A  P+ + IDGD  E     S   Q  +A
Sbjct: 918  KEHYLFLNKIQSKLVKSN----WRESVNTQQAS-PMMNCIDGDKIESILEWSEKKQMLLA 972

Query: 1192 DELDRTPGEILKKLEEI 1208
             ++     E+++K++ +
Sbjct: 973  QKIGVEHQEMIEKIQSL 989


>gi|9794904|gb|AAF98386.1| cleavage and polyadenylation specificity factor [Drosophila
           melanogaster]
          Length = 507

 Score = 48.1 bits (113), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 95/430 (22%), Positives = 162/430 (37%), Gaps = 56/430 (13%)

Query: 48  RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG 107
           R+E L +  ++G + SL    L G+ +D +++     ++ +L+++P       +    F 
Sbjct: 67  RLECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFE 126

Query: 108 KSGCRRIVPGQYLA----VDPKGRAVMIGACEKQKLVYVLNRDTAA-RLTISSPLEAHKS 162
           +   R    G+Y      VDP  R  ++    K+ +V    +D +   + ++      K+
Sbjct: 127 EDDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKA 186

Query: 163 HTIVYSICGIDCGF-------DNPIFAAIELDYSEADQDSTGQAASEAQKNL-------- 207
            T + S   I   +       D  I   +++ +     + T     E  +          
Sbjct: 187 PTAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRS 246

Query: 208 -TFYELDLGLNHVSRK----W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKN 259
            T   + + LN   R     W   S P D      +  P GG      LV   N VIY N
Sbjct: 247 DTCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGG-----CLVMTVNAVIYLN 301

Query: 260 QGHPDVRAVIPRRAD------LPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLE 312
           Q  P     +   AD      L  + GV I +  A      +   ++    GD++ +TL 
Sbjct: 302 QSVPPYGVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVDKLVISLRTGDLYVLTLC 361

Query: 313 HDN-EHVSELKIKYFDTIPVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSS 371
            D+   V            +T+ +CVL S Y+F  S  GN  L  F         E   S
Sbjct: 362 VDSMRTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLLHF--------TEEDQS 413

Query: 372 TLMETEEGFQPVFFQPRGL----KNLVRIEQVESLMPIMDMRIANLFEEEAPQIFTLCGR 427
           T++  +E  Q    Q R L    +NL  I  V+ L        +   E+E  +++   G 
Sbjct: 414 TVITLDEVEQQSEQQQRNLQDEDQNLEEIFDVDQLEMAPTQAKSRRIEDEELEVY---GS 470

Query: 428 GPRSSLRILR 437
           G ++S+  LR
Sbjct: 471 GAKASVLQLR 480


>gi|72390667|ref|XP_845628.1| damage-specific DNA binding protein [Trypanosoma brucei TREU927]
 gi|62359843|gb|AAX80271.1| damage-specific DNA binding protein, putative [Trypanosoma brucei]
 gi|70802163|gb|AAZ12069.1| damage-specific DNA binding protein, putative [Trypanosoma brucei
            brucei strain 927/4 GUTat10.1]
          Length = 1270

 Score = 48.1 bits (113), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 69/328 (21%), Positives = 112/328 (34%), Gaps = 55/328 (16%)

Query: 876  LELQDNE-AAFSICTVNFHDKEHGTLLAVGTAKGL------------QFWPKRNIVAGYI 922
             EL +NE  AF  C       E G+   V +  G+            Q       +   +
Sbjct: 818  FELLENERCAFIDCVALGQANEWGSCGEVASDAGVVLIGTTFVFPDEQLSRSSRFMWCTV 877

Query: 923  HIYRFVEEGKSLELLHKTQVEGIPLALC---QFQGRLLAGIGPVLRLYDLGKKRLLRKCE 979
             + +   E   L L     VEG     C    + GR+  GIG  + LY           E
Sbjct: 878  EVAKLRTEKTLLRLQGSKDVEGALQCCCIVPNYAGRVALGIGGCVVLYSWNAADATFVAE 937

Query: 980  NKLFPNTIVS-----INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAH 1034
              +   T++      +      I   D + S  F +    +  L I A D   R +    
Sbjct: 938  ETIQIGTLIVRLIPVMQKEVSYIVASDARHSCFFVRIDTIQGSLNIVARDPELRGVMDCA 997

Query: 1035 HIDF----DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV 1090
             + +    D   G D F N + V   + +++           K           K++   
Sbjct: 998  ILQYESRHDVCLGDDLF-NFFCVSHVEPLANSSGVSAPAMPTK-----------KLQTTA 1045

Query: 1091 QFHVGDVVTSLQKASLVPGG-----------------GESVIYGTVMGSLGAMLAFSSRD 1133
            Q+H+GD++T + + S  P                   G  ++YGT  G+ GA+   SS  
Sbjct: 1046 QYHMGDLITVMHQGSFAPCSVLNDVVPIPATLVRGVCGPQIVYGTSHGAFGAITPISSET 1105

Query: 1134 DVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
             +     LE+ +    PPL G  H ++R
Sbjct: 1106 FI-LLKGLEVSVASVVPPLGGFTHASFR 1132


>gi|308805673|ref|XP_003080148.1| cleavage and polyadenylation specificity factor (ISS) [Ostreococcus
            tauri]
 gi|116058608|emb|CAL54315.1| cleavage and polyadenylation specificity factor (ISS), partial
            [Ostreococcus tauri]
          Length = 1473

 Score = 47.8 bits (112), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 163/398 (40%), Gaps = 51/398 (12%)

Query: 835  DDENKYD-PLSDEQYGYPKAESDKWVS-CIRVLDPRSANTTCLLELQDNEAAFSICTVNF 892
            D EN +   LS  +    KA  D  +   +R+L P S +      L+  E    +  V  
Sbjct: 816  DGENVHGLSLSKARRERAKAHDDMELQYSVRLLVPGSLDCVWQHTLEPGEHVQCVRNVQL 875

Query: 893  HDKEHG---TLLAVGTA-KGLQFWPKRNIVAGYIHIYRFVEEGKSLE---LLHKTQVEGI 945
             D   G   + LAVGTA  G +  P R    G ++++  V E  S        K QV  +
Sbjct: 876  KDINTGHSLSYLAVGTAMPGGEDTPCR----GRVYLFNMVWERDSESADGYRWKGQVCCV 931

Query: 946  P------LALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYV 999
                    AL    G L+  +G  L ++     R L        P   VSIN  ++ I V
Sbjct: 932  REAKMACTALEGLGGHLIVAVGTKLTVHTW-DGRELNSVAFFDTPIHTVSINVVKNFILV 990

Query: 1000 GDIQESFHFCKYRR---DENQLYIFADDSVPRWLTAAHHIDFDTMA--GADKFGNI-YFV 1053
            GD+++  HF +++    +++ + +  D      +++   ID  T++  G+D  GN   F 
Sbjct: 991  GDLEKGLHFFRWKDTGFEKSLIQLSKDFERMDVVSSEFLIDGTTLSLLGSDMSGNARTFG 1050

Query: 1054 RLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE- 1112
              P+ +     E   G K+        G+P  +  +V+F+V    + +      P G   
Sbjct: 1051 YDPKSI-----ESWKGQKLLPRAAYHVGSP--ISRMVRFNVEGSKSKMASTDGKPKGANR 1103

Query: 1113 -SVIYGTVMGSLGAMLAFSSRDDVDFFSHL----EMHMRQEHPPLCG----RDHMAYRSA 1163
             +V +GT+ G+LG    F   D V +   L    E+      P  C     R    +   
Sbjct: 1104 FAVFFGTLDGALG---IFMPTDPVTYEKLLAIQRELTTAVRSPIGCNPRTFRTPKVFEGK 1160

Query: 1164 YFPVK---DVIDGDLCEQFPTLSLDLQRKIAD--ELDR 1196
            +  ++   DV+DG L  +F TL+   Q KIA   ++DR
Sbjct: 1161 HVQLRAPLDVLDGGLLSKFETLTFSEQVKIASSAQVDR 1198


>gi|440487047|gb|ELQ66855.1| DNA damage-binding protein 1a [Magnaporthe oryzae P131]
          Length = 1213

 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 28  PEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIV 87
           P +V+A+   LE+ R  + G+++   S  +FG I  L   R   S+ D + VG+D  +  
Sbjct: 57  PSLVLAKTNRLEIWRRTDEGQLKLEHSQSVFGKIVMLQAVRPKDSETDMLFVGTDRFKYF 116

Query: 88  ILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMI 131
             EY+P ++ +  +      G+   R +       VDP GR +++
Sbjct: 117 TAEYDPDTRELVTRQAISDLGEQFVREVSSRNRCIVDPSGRYMVL 161


>gi|332018184|gb|EGI58789.1| Cleavage and polyadenylation specificity factor subunit 1
           [Acromyrmex echinatior]
          Length = 1412

 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 87/410 (21%), Positives = 155/410 (37%), Gaps = 64/410 (15%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--PE-------------- 44
           MY    +    TG+  AI  +F       +VVA   V+ + R  P+              
Sbjct: 1   MYSICKSTHPATGVEHAITCHFFNRNEKCLVVAGANVIRVFRLIPDVDMTRREKYTETRP 60

Query: 45  NSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQE 104
              ++E L    + G I S+    L GSQ+D +++     ++ ++EY+   +    +   
Sbjct: 61  PKMKLECLTQYTLHGNIMSMQAVHLIGSQRDSLLLSFRDAKLSVVEYDQDIHDLRTVSLH 120

Query: 105 TFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDT---------AARL 151
            F     K G         + VDP+GR  ++    ++ +V    +D          +A+L
Sbjct: 121 YFEEEEIKDGWTNHHHIPIVRVDPEGRCAVMLIFGRKLVVLPFRKDPSLDDGDLLDSAKL 180

Query: 152 TISSPLEAHKSHTIVYSICG------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
           T ++      S+ IV           ID  F +  +    L   E  +  +G+ A   Q 
Sbjct: 181 TSTNKTPILSSYMIVLKTLEEKMDNVIDLQFLHGYYEPTLLILYEPVRTFSGRIAVR-QD 239

Query: 206 NLTFYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
                 + L +        WS    P D    + V  P G     G L+ A N +IY NQ
Sbjct: 240 TCAMVAISLNIQQRVHPIIWSVSNLPFDCYQAVPVKKPLG-----GTLIMAVNSLIYLNQ 294

Query: 261 GHPDVRAVIPRRAD------LPAERGVLIVSAATHRQKTLFF----FLLQTEYGDIFKVT 310
             P     +   AD      L  + G   V  +    +  F      ++  + G+++ ++
Sbjct: 295 SIPPYGVSLNSLADSSTNFPLKPQEG---VKMSLEGSQVAFISADRLVISLKSGELYVLS 351

Query: 311 LEHDNEHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQF 357
           L  D+  +  ++  +FD      +T+ +C+ +  YLF  S  GN  L +F
Sbjct: 352 LFADS--MRSVRGFHFDKAAASVLTSCVCMCEDNYLFLGSRLGNSLLLRF 399



 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 9/112 (8%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE-------FDAYI 472
           ++ T  G G   +L +L+  +    +   QLPG    +WTV   VN++         A++
Sbjct: 506 ELVTTSGYGKNGALCVLQRSIRPQVVTTFQLPGC-EDMWTVIGIVNNDEIRTEEGSHAFL 564

Query: 473 VVSFNNATLVLSIGETVEEVSDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIR 523
           ++S  ++T+VL  G+ + EV  SGF    +   A +L  +  ++QV   G+R
Sbjct: 565 ILSQEDSTMVLQTGQEINEVDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVR 616


>gi|389629928|ref|XP_003712617.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
 gi|351644949|gb|EHA52810.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
 gi|440464739|gb|ELQ34110.1| DNA damage-binding protein 1a [Magnaporthe oryzae Y34]
          Length = 1183

 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 28  PEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIV 87
           P +V+A+   LE+ R  + G+++   S  +FG I  L   R   S+ D + VG+D  +  
Sbjct: 27  PSLVLAKTNRLEIWRRTDEGQLKLEHSQSVFGKIVMLQAVRPKDSETDMLFVGTDRFKYF 86

Query: 88  ILEYNP-SKNVFDKIHQETFGKSGCRRIVPGQYLAVDPKGRAVMI 131
             EY+P ++ +  +      G+   R +       VDP GR +++
Sbjct: 87  TAEYDPDTRELVTRQAISDLGEQFVREVSSRNRCIVDPSGRYMVL 131


>gi|407851810|gb|EKG05523.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
          Length = 313

 Score = 47.4 bits (111), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 93/246 (37%), Gaps = 62/246 (25%)

Query: 1001 DIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGAD-KFGNIYFVRLPQDV 1059
            D + S  F +    +  L I A DS PR +          M GA  + GNIY +    D 
Sbjct: 5    DARHSCFFIQVDTFQGSLEIVARDSEPRGV----------MDGAVFQLGNIYNICFGDDY 54

Query: 1060 SDEIEEDPTGGKIKWEQGKLNG--APNKMEEIVQFHVGDVVTSLQKAS------------ 1105
             +          +       +   +  K+E   Q+H+GD+VT++Q  S            
Sbjct: 55   YNFFCLSRGASTLPSASNATSATVSSGKLETSAQYHLGDMVTAMQLGSFAPCSVTNIAVP 114

Query: 1106 ----LVPG-GGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAY 1160
                L+PG  G  V++GT  G+ G +   S+   +     LE+ +    P L G +H+ Y
Sbjct: 115  IPTTLIPGICGPQVVFGTSHGAFGTITPVSNETYL-LLKALEVAVSSVVPALGGFEHVTY 173

Query: 1161 -------------RSAYFPVKDVI------------------DGDLCEQFPTLSLDLQRK 1189
                         R+A F   +V+                   GDL E F T S  +Q++
Sbjct: 174  REVLRAGQERGYSRNASFENANVVSSGVFDKRRKRYLSRCVCSGDLIESFLTFSQTIQQR 233

Query: 1190 IADELD 1195
            I  E +
Sbjct: 234  ILREAE 239


>gi|119602512|gb|EAW82106.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform
           CRA_a [Homo sapiens]
 gi|119602513|gb|EAW82107.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform
           CRA_a [Homo sapiens]
 gi|119602514|gb|EAW82108.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform
           CRA_a [Homo sapiens]
          Length = 1365

 Score = 47.4 bits (111), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 130/339 (38%), Gaps = 44/339 (12%)

Query: 63  SLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFG----KSGCRRIVPGQ 118
           S+A  +L G+++D +++     ++ ++EY+P  +    +    F     + G  + V   
Sbjct: 2   SMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTP 61

Query: 119 YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDN 178
            + VDP GR   +     + +V    R++ A        E  +S  +   I  +    D 
Sbjct: 62  RVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVR-ALDE 120

Query: 179 PIFAAIELDY------------SEADQDSTGQAASEAQKNLTFYELDLGLNHVSRK--WS 224
            +   I+L +             E +Q   G+ A   Q   +   + L +        WS
Sbjct: 121 KLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCSIVAISLNITQKVHPVIWS 179

Query: 225 E---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD------L 275
               P D    + V  P GG     V+V A N ++Y NQ  P     +           L
Sbjct: 180 LTSLPFDCTQALAVPKPIGG-----VVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPL 234

Query: 276 PAERGVLIVSAATHRQKTLFFF---LLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIP-- 330
             + GV I       Q T   +   ++  + G+I+ +TL  D   +  ++  +FD     
Sbjct: 235 RTQEGVRITLDCA--QATFISYDKMVISLKGGEIYVLTLITDG--MRSVRAFHFDKAAAS 290

Query: 331 -VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEA 368
            +T SM  ++ GYLF  S  GN  L ++     +P   A
Sbjct: 291 VLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASA 329



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 27/130 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 421 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEDNPKGEGTEQ 479

Query: 470 ---------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS- 513
                           ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  
Sbjct: 480 EPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRY 539

Query: 514 LMQVHPSGIR 523
           ++QV P GIR
Sbjct: 540 IVQVSPLGIR 549


>gi|261329035|emb|CBH12013.1| damage-specific DNA binding protein, putative [Trypanosoma brucei
            gambiense DAL972]
          Length = 1270

 Score = 47.4 bits (111), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 69/328 (21%), Positives = 112/328 (34%), Gaps = 55/328 (16%)

Query: 876  LELQDNE-AAFSICTVNFHDKEHGTLLAVGTAKGL------------QFWPKRNIVAGYI 922
             EL +NE  AF  C       E G+   V +  G+            Q       +   +
Sbjct: 818  FELLENERCAFIDCVALGQANEWGSCGEVASDAGVVLIGTTFVFPDEQLSRSSRFMWCTV 877

Query: 923  HIYRFVEEGKSLELLHKTQVEGIPLALC---QFQGRLLAGIGPVLRLYDLGKKRLLRKCE 979
             + +   E   L L     VEG     C    + GR+  GIG  + LY           E
Sbjct: 878  EVAKLRTEKTLLRLQGSKDVEGALQCCCIVPNYAGRVALGIGGCVVLYSWNAADATFVAE 937

Query: 980  NKLFPNTIVS-----INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAH 1034
              +   T++      +      I   D + S  F +    +  L I A D   R +    
Sbjct: 938  ETIQIGTLIVRLIPVMQKEVSYIVASDARHSCFFVRIDTIQGSLNIVARDPELRGVMDCA 997

Query: 1035 HIDF----DTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIV 1090
             + +    D   G D F N + V   + +++           K           K++   
Sbjct: 998  ILQYESRHDVCLGDDLF-NFFCVSHVEPLANSSGVSAPAMPTK-----------KLQTSA 1045

Query: 1091 QFHVGDVVTSLQKASLVPGG-----------------GESVIYGTVMGSLGAMLAFSSRD 1133
            Q+H+GD++T + + S  P                   G  ++YGT  G+ GA+   SS  
Sbjct: 1046 QYHMGDLITVMHQGSFAPCSVLNDVVPIPATLVRGVCGPQIVYGTSHGAFGAITPISSET 1105

Query: 1134 DVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
             +     LE+ +    PPL G  H ++R
Sbjct: 1106 FI-LLKGLEVSVASVVPPLGGFTHASFR 1132


>gi|242047820|ref|XP_002461656.1| hypothetical protein SORBIDRAFT_02g006020 [Sorghum bicolor]
 gi|241925033|gb|EER98177.1| hypothetical protein SORBIDRAFT_02g006020 [Sorghum bicolor]
          Length = 315

 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 12  TGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRLTG 71
           + ++    G F    + ++V+A+   LEL+   + G ++++   ++FG I+ +   +   
Sbjct: 52  SAVLHVAEGCFRSPDSADVVLAKETSLELVAVGDDGVLQSICEQDMFGIIKDIGVLQWHS 111

Query: 72  ---------SQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
                      KD +VV SDSG++ +L +    + F  I      K G  R   G+ LA+
Sbjct: 112 RHVGLIPQIEHKDLLVVLSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHHLGRILAI 171

Query: 123 DPKGRAVMIGACE-KQKLVYV 142
           D +   V + + E K  L++V
Sbjct: 172 DRESNFVAVSSYEDKFALIHV 192


>gi|427780291|gb|JAA55597.1| Putative mrna cleavage and polyadenylation factor ii complex subunit
            cft1 cpsf subunit [Rhipicephalus pulchellus]
          Length = 1237

 Score = 47.0 bits (110), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 22/288 (7%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC--ENKLFPNTIVSIN 991
            +++++  + +G   AL Q  G LL+ IG  + ++ L    L+     + +++ +++V++ 
Sbjct: 952  IKIVYSKEQKGPVTALSQVVGFLLSAIGQKIYIWQLKDNELVGVAFIDTQIYIHSVVTV- 1010

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH-IDFDTMAG--ADKFG 1048
              ++ I VGD+ +S    +Y+     L + + D  P  + A    ID   M+    D   
Sbjct: 1011 --KNLILVGDVFKSVSLLRYQEASRTLSLVSRDVRPLEVYAVEFFIDNTQMSFLVTDAER 1068

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN-GAPNKMEEIVQFHVGDVVTSLQKASLV 1107
            N+  + + Q  S E      GG+    +G  + G+P      ++  +GD+    ++A+ +
Sbjct: 1069 NL-LLYMYQPESRE----SCGGQRLLRRGDFHVGSPVVSMFRIKCRMGDIAKYDRRAASI 1123

Query: 1108 PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF-- 1165
              G    +  T+ GSL  +L    +        L+  +    P   G +  AYR  Y   
Sbjct: 1124 VDGRHITMMATLDGSLAYVLPVPEKTYRRLLM-LQNVLVTNIPHYAGLNPKAYRMYYSQR 1182

Query: 1166 -----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
                 P K+++DG+L  +F  LS   + +++ ++  T  +I   L EI
Sbjct: 1183 RFLGNPHKNILDGELIWKFMHLSFMERSELSKKIGTTVTQITDDLLEI 1230


>gi|348555854|ref|XP_003463738.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform 1 [Cavia porcellus]
          Length = 1440

 Score = 47.0 bits (110), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 131/639 (20%), Positives = 233/639 (36%), Gaps = 131/639 (20%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR--------------PENS 46
           MY        PTG+  A+  NF       +VVA    L + R               E  
Sbjct: 1   MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRPTEGK 60

Query: 47  GRIETLVS----TEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIH 102
              E L +    +  FG + S+A  +L        ++     ++ ++EY+P  +    + 
Sbjct: 61  SHREKLGAGGPPSLSFGNVMSMASVQLXXXXXXIALISFP--QLSVVEYDPGTHDLKTLS 118

Query: 103 QETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLE 158
              F     + G  + V    + VDP GR   +     + +V    R++ A        E
Sbjct: 119 LHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGE 178

Query: 159 AHKSHTIVYSICGI-----------DCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNL 207
             +S  +   I  +           D  F +  +    L   E +Q   G+ A   Q   
Sbjct: 179 GQRSSFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTC 237

Query: 208 TFYELDLGLNHVSRK--WSE---PVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGH 262
           +   + L +        WS    P D    + V  P GG     V++ A N ++Y NQ  
Sbjct: 238 SIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGG-----VVIFAVNSLLYLNQSV 292

Query: 263 PDVRAVIPRRA------DLPAERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDN 315
           P     +           L  + GV I +  A     +    ++  + G+I+ +TL  D 
Sbjct: 293 PPYGVALNSLTLGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG 352

Query: 316 EHVSELKIKYFDTIP---VTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSST 372
             +  ++  +FD      +T SM  ++ GYLF  S  GN  L ++     +P     +ST
Sbjct: 353 --MRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PAST 406

Query: 373 LMETEEGFQPVFFQPR--------GLKNLVR--IEQVE---------------------- 400
           + E  +  +P   + R        G K + +  ++++E                      
Sbjct: 407 VREAADKEEPPSKKKRVDSTAGWAGSKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDS 466

Query: 401 --SLMPIMDMRI---ANLFEE--EAPQ----IFTLCGRGPRSSLRILRPGLAVSEMAVSQ 449
             ++ P  +  +   A L EE   +P+    I    G G   +L +L+  +    +   +
Sbjct: 467 MLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFE 526

Query: 450 LPGVPSAVWTVKKNVNDEFD------------------------AYIVVSFNNATLVLSI 485
           LPG    +WTV   V  E +                         ++++S  ++T++L  
Sbjct: 527 LPGC-YDMWTVIAPVRKEEEETPKAEGSEQEPSAPEAEDDGRRHGFLILSREDSTMILQT 585

Query: 486 GETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQVHPSGIR 523
           G+ + E+  SGF    P++    IGD+  ++QV P GIR
Sbjct: 586 GQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 624


>gi|449477808|ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cucumis sativus]
          Length = 643

 Score = 47.0 bits (110), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 17/120 (14%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV-KKNV-------------N 465
           ++    G G   +L ILR  +    +   +LPG    +WTV  KN              +
Sbjct: 427 ELVCCSGHGKNGALCILRQSIRPEMITEVELPGCK-GIWTVYHKNTRGSIADSSRMVPDD 485

Query: 466 DEFDAYIVVSFNNATLVLSIGETVEEVSDS--GFLDTTPSLAVSLIGDDSLMQVHPSGIR 523
           DE+ AY+++S    T+VL  GE + EV++S   F+      A +L G   ++QV+ SG R
Sbjct: 486 DEYHAYLIISLEARTMVLVTGELLTEVTESVDYFVHGRTIAAGNLFGRRRVIQVYESGAR 545


>gi|427795803|gb|JAA63353.1| Putative mrna cleavage and polyadenylation factor ii complex subunit
            cft1 cpsf subunit, partial [Rhipicephalus pulchellus]
          Length = 726

 Score = 47.0 bits (110), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 22/288 (7%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC--ENKLFPNTIVSIN 991
            +++++  + +G   AL Q  G LL+ IG  + ++ L    L+     + +++ +++V++ 
Sbjct: 441  IKIVYSKEQKGPVTALSQVVGFLLSAIGQKIYIWQLKDNELVGVAFIDTQIYIHSVVTV- 499

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH-IDFDTMAG--ADKFG 1048
              ++ I VGD+ +S    +Y+     L + + D  P  + A    ID   M+    D   
Sbjct: 500  --KNLILVGDVFKSVSLLRYQEASRTLSLVSRDVRPLEVYAVEFFIDNTQMSFLVTDAER 557

Query: 1049 NIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN-GAPNKMEEIVQFHVGDVVTSLQKASLV 1107
            N+  + + Q  S E      GG+    +G  + G+P      ++  +GD+    ++A+ +
Sbjct: 558  NL-LLYMYQPESRE----SCGGQRLLRRGDFHVGSPVVSMFRIKCRMGDIAKYDRRAASI 612

Query: 1108 PGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF-- 1165
              G    +  T+ GSL  +L    +        L+  +    P   G +  AYR  Y   
Sbjct: 613  VDGRHITMMATLDGSLAYVLPVPEKTYRRLLM-LQNVLVTNIPHYAGLNPKAYRMYYSQR 671

Query: 1166 -----PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
                 P K+++DG+L  +F  LS   + +++ ++  T  +I   L EI
Sbjct: 672  RFLGNPHKNILDGELIWKFMHLSFMERSELSKKIGTTVTQITDDLLEI 719


>gi|401827151|ref|XP_003887668.1| hypothetical protein EHEL_071650 [Encephalitozoon hellem ATCC 50504]
 gi|392998674|gb|AFM98687.1| hypothetical protein EHEL_071650 [Encephalitozoon hellem ATCC 50504]
          Length = 933

 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 18/171 (10%)

Query: 898  GTLLAVGTAKGLQFWPKR-NIVAGYIHIY--------RFVEEGKSLELLHKTQVEGIPLA 948
            G+L+  G    ++F      IV+ Y  IY         F++  K+  LL+  ++ G  + 
Sbjct: 663  GSLVVEGCGNAIEFSSSEYQIVSAYARIYDKEGAKSKYFLKVYKNGGLLYDFEIFG-KIE 721

Query: 949  LCQFQGR-LLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFH 1007
            +    G+ +   I   L  Y++G K LL+K +  L P+ I  + T  DR++VG  + S  
Sbjct: 722  VITVNGKEVYCSIENNLYCYEIGVKTLLKKFKVAL-PSRITKMCTGEDRLFVGTEKNSVF 780

Query: 1008 FCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
              K RR      I   + +PR + A   +D   +   ++ GN+  +++  D
Sbjct: 781  VVKDRR------IVCRERIPRHVMALESMDDGCLVVGERVGNVVIMKIKDD 825


>gi|301093545|ref|XP_002997618.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262110008|gb|EEY68060.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1744

 Score = 46.2 bits (108), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 14/229 (6%)

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            K   +G    + Q    +LA +G  L +Y+   ++L+  C        IV+++  +D + 
Sbjct: 1453 KEHRQGAISMVSQLGPYVLAAVGSKLIVYEFKSEQLI-GCAFYDAQMYIVTLSVVKDFVM 1511

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD---TMAGADKFGNIYFVRL 1055
             GD+ +S HF ++R  + QL + A D  P  ++A     F+    +   D   N++ ++ 
Sbjct: 1512 YGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQF 1571

Query: 1056 -PQDVSDEIEEDPTGGK--IKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
             PQD+      +  GG+  ++     L    + M        G VV++    +  P    
Sbjct: 1572 APQDI------ESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNY 1625

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
              + GT  G +GA++    R     F+ L+  M    P  C  +   +R
Sbjct: 1626 VNVMGTSEGGVGALVPVGERVFRRLFT-LQNVMVNTLPQNCALNPREFR 1673


>gi|407034933|gb|EKE37449.1| DNA damage-binding protein, putative [Entamoeba nuttalli P19]
          Length = 995

 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 52/377 (13%)

Query: 837  ENKYDPLSDEQYGYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKE 896
            EN     +D  YG       K +  I ++D     TT  +EL+ NE A  +      D  
Sbjct: 660  ENCCKIATDGSYGLLVG---KTIKSINLIDGSFGVTT--IELKSNELALCV------DSL 708

Query: 897  HGTLLAVGTA--KGLQFWPKRNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQG 954
               + AVGTA  +  +  P     +G I + R   EG  + ++     +G    L + Q 
Sbjct: 709  EDNIYAVGTAIIRENEIEPS----SGRILLIRQDTEG-LIYIVGTEDYDGAVYCLKKCQK 763

Query: 955  RLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRD 1014
             ++A I   + + +   K L  K +N L P   VS++  +D I  GD+  S    +YR D
Sbjct: 764  GIVAFINRNVHVIEKKGKDLNTK-QNMLLPLIGVSLDICKDYIIAGDLARSLSVYRYRND 822

Query: 1015 ENQLYIFADDSVPRWLTAAHHIDFD---TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGK 1071
               L +   D+   W +    I+ +   +   AD  GNI         SDE EE  T  +
Sbjct: 823  IEHLDVVGKDNQIVWSSCVGSIESEYGTSFLVADVSGNIKIFN-----SDE-EEPKTDDE 876

Query: 1072 IKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSS 1131
                         K+  I Q HV D +  +QK S   G     + G V G +  +    S
Sbjct: 877  -------------KISLISQVHVADSINFIQK-SFYKG----CLMGGVHGGIYNICEI-S 917

Query: 1132 RDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIA 1191
            ++   F + ++  + + +     R+ +  +    P+ + IDGD  E     S   Q  +A
Sbjct: 918  KEHYLFLNKIQSKLVKSN----WRESVNTQQTS-PMMNCIDGDKIESILEWSEKKQMLLA 972

Query: 1192 DELDRTPGEILKKLEEI 1208
             ++     E+++K++ +
Sbjct: 973  QKIGVEHQEMIEKIQSL 989


>gi|301103686|ref|XP_002900929.1| cleavage and polyadenylation specificity factor subunit, putative
            [Phytophthora infestans T30-4]
 gi|262101684|gb|EEY59736.1| cleavage and polyadenylation specificity factor subunit, putative
            [Phytophthora infestans T30-4]
          Length = 1561

 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 14/229 (6%)

Query: 939  KTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIY 998
            K   +G    + Q    +LA +G  L +Y+   ++L+  C        IV+++  +D + 
Sbjct: 1270 KEHRQGAISMVSQLGPYVLAAVGSKLIVYEFKSEQLI-GCAFYDAQMYIVTLSVVKDFVM 1328

Query: 999  VGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFD---TMAGADKFGNIYFVRL 1055
             GD+ +S HF ++R  + QL + A D  P  ++A     F+    +   D   N++ ++ 
Sbjct: 1329 YGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQF 1388

Query: 1056 -PQDVSDEIEEDPTGGK--IKWEQGKLNGAPNKMEEIVQFHVGDVVTSLQKASLVPGGGE 1112
             PQD+      +  GG+  ++     L    + M        G VV++    +  P    
Sbjct: 1389 APQDI------ESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNY 1442

Query: 1113 SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYR 1161
              + GT  G +GA++    R     F+ L+  M    P  C  +   +R
Sbjct: 1443 VNVMGTSEGGVGALVPVGERVFRRLFT-LQNVMVNTLPQNCALNPREFR 1490



 Score = 40.4 bits (93), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 456 AVWTVKKNV--------NDEFDAYIVVSFNNATLVLSIGETVEEVS-DSGFLDTTPSLAV 506
           A+WTV  ++           ++AY+++S  + T+VL  GE +E +  DSGF  + P+LA 
Sbjct: 502 AMWTVSSSLPSATRSSDGRSYNAYLILSVAHRTMVLRTGEGMEPLEDDSGFYTSGPTLAA 561

Query: 507 S-LIGDDSLMQVHPSGIRHIRE 527
           + L     ++Q+   G R + E
Sbjct: 562 ANLFNKQRIVQIFKQGARVMME 583


>gi|134025022|gb|AAI35011.1| LOC564406 protein [Danio rerio]
          Length = 348

 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 114/303 (37%), Gaps = 49/303 (16%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-----------------P 43
           MY        PT +  A+  NF  ++   +VVA    L + R                  
Sbjct: 1   MYAVYRQAHPPTAVEFAVYCNFISSQEKNLVVAGTSQLYVYRIIYDVESTSKSEKSSDGK 60

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S  +FG + S+A  +L G+ +D +++     ++ ++EY+P  +    +  
Sbjct: 61  SRKEKLEQVASFSLFGNVMSMASVQLVGTNRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGR-AVMI--GACEKQKLVYVLNRDTAARLTISSP 156
             F     + G  + V    + VDP+ R AVM+  G C    +V    +DT A       
Sbjct: 121 HYFEEPELRDGFVQNVHIPMVRVDPENRCAVMLVYGTC---LVVLPFRKDTLADEQEGIV 177

Query: 157 LEAHKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQK 205
            E  KS  +   I             ID  F +  +    L   E +Q   G+ A   Q 
Sbjct: 178 GEGQKSSFLPSYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVR-QD 236

Query: 206 NLTFYELDLGLNHVSRK--WS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQ 260
             +   + L +        WS    P D    M V  P G     GV+V A N ++Y NQ
Sbjct: 237 TCSIVAISLNIMQKVHPVIWSLSNLPFDCNQVMAVPKPIG-----GVVVFAVNSLLYLNQ 291

Query: 261 GHP 263
             P
Sbjct: 292 SVP 294


>gi|167539942|ref|XP_001741428.1| DNA repair protein xp-E [Entamoeba dispar SAW760]
 gi|165894130|gb|EDR22214.1| DNA repair protein xp-E, putative [Entamoeba dispar SAW760]
          Length = 1004

 Score = 45.8 bits (107), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 149/357 (41%), Gaps = 49/357 (13%)

Query: 857  KWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTA--KGLQFWPK 914
            K +  I ++D     TT  +EL+ NE A  +      D     + AVGTA  +  +  P 
Sbjct: 686  KTIKSINLVDGSFGVTT--VELKSNELALCV------DSLEDNIYAVGTAIIRENEIEPS 737

Query: 915  RNIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRL 974
                +G I + R   EG  + ++     +G    L ++Q  ++A I   + + +   K L
Sbjct: 738  ----SGRILLIRQDSEG-LIYIVGTEDYDGAVYCLKKYQKGIVAFINRNVHVIEKKGKDL 792

Query: 975  LRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAH 1034
              K +N L P   VS++  +D I  GD+  S    +YR D   L I   D+   W +   
Sbjct: 793  STK-QNMLLPLIGVSLDICKDYIIAGDLARSVSVYRYRNDIEHLDIVGKDNQIVWSSCVG 851

Query: 1035 HIDFD---TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKMEEIVQ 1091
             I+ +   +   AD  GNI        + +  EE+P     K +  K+N        I Q
Sbjct: 852  SIESEYGTSFLVADVSGNI-------KIFNSNEEEP-----KTDDEKIN-------LISQ 892

Query: 1092 FHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPP 1151
             H+ D +  +QK S   G     + G V G +  +    S++   F   ++  + + +  
Sbjct: 893  VHIADSINFIQK-SFYKG----CLMGGVHGGIYNICEI-SKEQYLFLDKIQSKLVKPN-- 944

Query: 1152 LCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEI 1208
               R+ +  +    P+ + IDGD  E     S   Q  +A ++     E+++K++ +
Sbjct: 945  --WRESVNTQQTN-PMMNCIDGDKIESVLEWSEKKQILLAQKIGVEYQEMIEKIQSL 998


>gi|328771718|gb|EGF81757.1| hypothetical protein BATDEDRAFT_34564 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1248

 Score = 45.4 bits (106), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/266 (20%), Positives = 106/266 (39%), Gaps = 34/266 (12%)

Query: 849  GYPKAESDKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKG 908
            G  + ++D+ ++ ++V++P +        L  NE   S+  + +H K     + +GT   
Sbjct: 815  GSSQGDADEILTTVKVMNPDTGQVYATERLAANETIHSL--IVWHVKPTKRYICMGT--- 869

Query: 909  LQFWPKRNIVAGYIHIYRFVEEGKS----LELLHKTQVEGIPLALCQF-QGRLLAGIGPV 963
                 + +  +G + ++      K+      L+ +  + G  LALC F    LLA  G  
Sbjct: 870  -----RIHATSGRVLVFGLKPATKNKHIKFTLMGQYTLNGPVLALCTFVNSYLLASAGST 924

Query: 964  LRLYDLGKKRLLRKCEN--KLFPNTIVS-INTYRDRIYVGDIQESFHFCKYRRDENQLYI 1020
            L  Y L  + + R       +  N+I++ I+  + +I++ + Q+S    K+         
Sbjct: 925  L--YQLKIEAVHRTITAGASIDINSIITRIHALKTQIFIANTQDSISVYKFDIATKAFAF 982

Query: 1021 FADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN 1080
               D   R  +    +D   + G D+ GNIY +   Q    +  E               
Sbjct: 983  IKSDVTSRVGSECFPLDDSLVIGTDRHGNIYGLDTNQGEDSDTHESTDS----------- 1031

Query: 1081 GAPNKMEEIVQFHVGDVVTSLQKASL 1106
                 M+   +FH+ D+V  L+  S+
Sbjct: 1032 ---QSMQTGFEFHILDIVLQLKPGSM 1054


>gi|296414526|ref|XP_002836950.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295632796|emb|CAZ81141.1| unnamed protein product [Tuber melanosporum]
          Length = 1468

 Score = 45.1 bits (105), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)

Query: 861  CIRVLDPRSANTTCLLELQDNEAAFSICTVNF----HDKEHGTLLAVGTAKGLQFWPKRN 916
             +++L P++       +   NE A  + T++     H KE   L++VGTA    F  + +
Sbjct: 1065 TLKLLSPQTWTAVDEYKFAHNEIALVVKTISLEVSEHTKERKQLVSVGTAI---FRGEDH 1121

Query: 917  IVAGYIHIYRFVE---------EGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY 967
               G I+++  +E           + L+L+ + +V+G   A+C   G LLA  G  + + 
Sbjct: 1122 SARGGIYVFEVIEVVPEPNRPETNRKLKLVTREEVKGTVSAICGVNGYLLAAQGQKIMVR 1181

Query: 968  DLGKKRLLRKCENKLFPNTIVSINTYRD-------RIYVGDIQESFHFCKYRRDENQLYI 1020
             L       K +  L P   + +  Y          I  GD  +S  F  +  +  ++ +
Sbjct: 1182 GL-------KEDQSLLPVAFLDMCLYVSVAKNLDGMILFGDFMKSVWFAGFSEEPYKMTL 1234

Query: 1021 FADDS 1025
            F  D+
Sbjct: 1235 FGKDT 1239


>gi|33411762|emb|CAD58786.1| cleavage and polyadenylation specificity factor 1 [Bos taurus]
          Length = 880

 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 145/378 (38%), Gaps = 90/378 (23%)

Query: 224 SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRAD------LPA 277
           S P D    + V  P GG     V++ A N ++Y NQ  P     +           L  
Sbjct: 80  SLPFDCTQALAVPKPIGG-----VVIFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRT 134

Query: 278 ERGVLI-VSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEHVSELKIKYFDTIP---VTA 333
           + GV I +  A     +    ++  + G+I+ +TL  D   +  ++  +FD      +T 
Sbjct: 135 QEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDG--MRSVRAFHFDKAAASVLTT 192

Query: 334 SMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPR----- 388
           SM  ++ GYLF  S  GN  L ++     +P     +ST  E  +  +P   + R     
Sbjct: 193 SMVTMEPGYLFLGSRLGNSLLLKYTEKLQEP----PASTAREAADKEEPPSKKKRVDATT 248

Query: 389 ---GLKNLVR-----------------------IEQVESLMPIMDMRIANLFE------- 415
              G K++ +                        E  +S++ I     A + E       
Sbjct: 249 GWSGSKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAMGEPAFLSEE 308

Query: 416 -EEAPQ----IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD- 469
            + +P+    I    G G   +L +L+  +    +   +LPG    +WTV   V  E + 
Sbjct: 309 FQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEQEE 367

Query: 470 -----------------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAV 506
                                   ++++S  ++T++L  G+ + E+  SGF    P++  
Sbjct: 368 TLKGEGTEPEPGAPEAEDDGRRHGFLILSREDSTMILQTGQEIMELDASGFATQGPTVFA 427

Query: 507 SLIGDDS-LMQVHPSGIR 523
             IGD+  ++QV P GIR
Sbjct: 428 GNIGDNRYIVQVSPLGIR 445


>gi|340054355|emb|CCC48651.1| putative damage-specific DNA binding protein [Trypanosoma vivax Y486]
          Length = 1272

 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 76/212 (35%), Gaps = 62/212 (29%)

Query: 1031 TAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPN-KMEEI 1089
            T  H    D M   D F N++ V  P  +      D              G P  K+   
Sbjct: 1000 TVLHSGARDDMCFGDDFFNLFCV--PHVMPSATSPDAPAA----------GMPTCKLPTS 1047

Query: 1090 VQFHVGDVVTSLQKAS----------------LVPG-GGESVIYGTVMGSLGAMLAFSSR 1132
             Q+HVGD++T++Q+ S                L+PG  G  +++GT  GS G +   +S 
Sbjct: 1048 AQYHVGDLITAMQQGSFAPCSLSNGVVPVPKVLIPGVCGPQIVFGTTHGSFGTITPVTSE 1107

Query: 1133 DDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAY---------------------------- 1164
              +     +E+ +    P L G  H AYR                               
Sbjct: 1108 TYL-LLKGIEVAVAAVVPALGGFSHAAYREVLCANQERGVSRNASFEAVNPRAMEVLRER 1166

Query: 1165 ---FPVKDVIDGDLCEQFPTLSLDLQRKIADE 1193
               +  + V  GDL E F TLS D Q ++ +E
Sbjct: 1167 RLKYVARCVCSGDLVEMFLTLSPDTQLRVIEE 1198


>gi|323447810|gb|EGB03719.1| hypothetical protein AURANDRAFT_72671 [Aureococcus anophagefferens]
          Length = 760

 Score = 44.3 bits (103), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 140/325 (43%), Gaps = 43/325 (13%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS--FN 477
           +I   CG G   +L I+  GL V+  A       P+ +  +   ++   +  IV +    
Sbjct: 14  RIVACCGAGDAGTLHIVHDGLDVTGTASRS----PTRITNLSLILSSRGEMVIVSTEAAT 69

Query: 478 NATLVLSIGETVEEVSD-SGFLDTTPSLAVSLIGDDSLMQVHPSGIR--HIREDGR-INE 533
           +A LV + G T    S+  GF +T  ++    +GD + +QV P  I   +  E+ R +  
Sbjct: 70  HAFLVANDGSTTAFPSNPQGFDETISTIYCCNLGD-AAVQVTPRAISKFYTGENRRKLKT 128

Query: 534 WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVP 593
           WR    R     G+N   ++I+LS G+L+  + D+      +    +  + +C  +A  P
Sbjct: 129 WRPKDGRITAATGNNGAVILISLSNGKLVLLDCDVE----PIASAALDDEASC--VALSP 182

Query: 594 EGRKRSRFLAVGSYDNTIRILSLDPDDCMQI------------LSVQSVSSPPESLLFLE 641
            G    + L + ++   + + S DP  C+ +            ++ Q  SS  ++L F  
Sbjct: 183 SGSASFKDLGM-AHATAVSVWS-DPVSCVSVYDSILNKIHDPTITWQDKSSNEQTLQF-- 238

Query: 642 VQASVGGEDGADHPASLFLNA--GLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPPKLFSV 699
           V+A V  E   +    LF  +  GL     F    D+VT   +  R+  LG+ P ++  +
Sbjct: 239 VRALVLSE--INEKPYLFCASGDGLVTVYQFACGNDVVT--TTRLRAVSLGVLPARVLIL 294

Query: 700 VVGGRAA--MLCLSSRPWLGYIHRG 722
               R A  +LC S R  +  + RG
Sbjct: 295 GAFDRMARSVLCFSDRACV--VRRG 317


>gi|19112233|ref|NP_595441.1| cleavage factor one Cft1 (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|74582544|sp|O74733.1|CFT1_SCHPO RecName: Full=Protein cft1; AltName: Full=Cleavage factor two
           protein 1
 gi|3738146|emb|CAA21247.1| cleavage factor one Cft1 (predicted) [Schizosaccharomyces pombe]
          Length = 1441

 Score = 43.9 bits (102), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 465 NDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAV-SLIGDDSLMQVHPSGIR 523
           N E + Y+V+S    + +   GET +EV  S F   + +L V SL+    ++Q+ P+ +R
Sbjct: 583 NPELETYLVLSKEKESFIFLAGETFDEVQHSDFSKDSKTLNVGSLLSGMRMVQICPTSLR 642

Query: 524 HIREDGRINEWRTPGKRTIVKVGS--NRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMS 581
               + R+ +     K+ IV   S  +   +V+ L GG  +Y ++D+  Q L   K ++ 
Sbjct: 643 VYDSNLRLTQLFNFSKKQIVVSTSICDPCIIVVFLGGGIALY-KMDLKSQRL--IKTDLQ 699

Query: 582 GDVACLDIASVPEGRKRSRFLAVGSYDNTIR 612
             ++ +  AS+      + F  + +Y+ T+ 
Sbjct: 700 NRLSDVKTASLVSPDSSALFAKLFTYNETLN 730


>gi|115471085|ref|NP_001059141.1| Os07g0203800 [Oryza sativa Japonica Group]
 gi|113610677|dbj|BAF21055.1| Os07g0203800, partial [Oryza sativa Japonica Group]
          Length = 281

 Score = 43.9 bits (102), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 22/195 (11%)

Query: 12  TGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLA--QFRL 69
           + ++    G F      ++V+ +   LEL+     G ++++     FG I+ +    +R 
Sbjct: 60  SAVLHVAQGCFRSPDCVDVVLCKENSLELVVIGEDGVLQSICEQTTFGIIKDVGVLNWRC 119

Query: 70  TG-------SQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAV 122
           T          K+ +V+ SDSG++ +L +    + F  I      K G  R   G+ LA+
Sbjct: 120 THFGLMPKIEGKEILVILSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHRLGRILAI 179

Query: 123 DPKGRAVMIGACEKQKLVYVLNRDTAARL----------TISSPLEAHKSHTIVYSICGI 172
           D + R V + A E +     ++ D                IS+       H  V+S+C I
Sbjct: 180 DRESRFVAVSAYEDEFAFVRVSVDHKLHAPNGEIEEDAKIISTAYNTSSIHGTVWSMCFI 239

Query: 173 DCGFDN---PIFAAI 184
               D    P+ A I
Sbjct: 240 STCLDEEYYPVVAMI 254


>gi|320169222|gb|EFW46121.1| cleavage and polyadenylation specificity factor 1 [Capsaspora
            owczarzaki ATCC 30864]
          Length = 1725

 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 116/303 (38%), Gaps = 52/303 (17%)

Query: 929  EEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIV 988
            +  + L+ L + + +G   AL    G L++ IG  + ++       +           +V
Sbjct: 1439 QTNRKLKYLMEREQKGAITALSHVCGHLVSCIGQKIIIWQFASDDTMDGVAFIDTQTFVV 1498

Query: 989  SINTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFG 1048
            S++  ++ I VGD+  S    ++      L   A D             FD M+ A    
Sbjct: 1499 SVSAIKNFILVGDLNNSVFLLRFNETTKHLGFIARD-------------FDHMSVAS--- 1542

Query: 1049 NIYFVRLPQDVSDE--IEEDPTGGKIKWEQGKLNGAPNKMEEIVQ---FHVGDVVTSLQK 1103
                 +   D S    +  D     + +    LN   N  + +++   FHVG  V  + +
Sbjct: 1543 ----TQFLVDGSSLGFLATDSHQNLVVFAYNPLNRESNNGQRLLRQLDFHVGSHVQQVLR 1598

Query: 1104 ASLVPGG-------GESV-----IYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQ--EH 1149
              +VP         G SV     +  T+ GSL A+           F  LE   RQ    
Sbjct: 1599 --MVPRSLPVSVDRGASVKRHIDLLATLEGSLNALAPIGETT----FRRLEWLQRQLVGL 1652

Query: 1150 PPLCGRDHMAYRSAYFPVK-------DVIDGDLCEQFPTLSLDLQRKIADELDRTPGEIL 1202
                G + + YR+  FP K       +VIDG+L  +F  L L  QR++A +   TP +++
Sbjct: 1653 QQRAGLNPIGYRAYRFPRKMTTTRAGNVIDGELLSRFLYLGLAEQRELARQRRNTPEDLI 1712

Query: 1203 KKL 1205
              +
Sbjct: 1713 DDI 1715


>gi|303390103|ref|XP_003073283.1| hypothetical protein Eint_071640 [Encephalitozoon intestinalis ATCC
            50506]
 gi|303302428|gb|ADM11923.1| hypothetical protein Eint_071640 [Encephalitozoon intestinalis ATCC
            50506]
          Length = 935

 Score = 43.5 bits (101), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 964  LRLYDLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDENQLYIFAD 1023
            L  Y++G K LLRK + K FP+ I  I + RD+++VG  ++S    K RR      I   
Sbjct: 740  LYCYEVGVKSLLRKFKLK-FPSKISGICSDRDKLFVGTEKDSVFMVKDRR------IVCR 792

Query: 1024 DSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQD 1058
            D  PR + A   ++   +   D  GNI  + +  D
Sbjct: 793  DKFPRRVVALERMNDGNLVVGDWAGNIIVMEVKDD 827


>gi|337280058|ref|YP_004619530.1| 30S ribosomal protein S6 [Ramlibacter tataouinensis TTB310]
 gi|334731135|gb|AEG93511.1| Candidate 30S ribosomal protein S6 [Ramlibacter tataouinensis TTB310]
          Length = 121

 Score = 43.5 bits (101), Expect = 0.80,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
            L+H  Q E +P  L +++G + AG G V R+ D G+++L  +  NKL     + +N   D
Sbjct: 9    LIHPDQSEQVPAMLERYKGMITAGGGKVHRVEDWGRRQLAYQI-NKLAKAHYLCVNIEAD 67

Query: 996  RIYVGDIQESFHF 1008
            +  +G+++ +F F
Sbjct: 68   QAVMGELEHAFRF 80


>gi|258572939|ref|XP_002540651.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237900917|gb|EEP75318.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1144

 Score = 43.5 bits (101), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 252/1287 (19%), Positives = 469/1287 (36%), Gaps = 227/1287 (17%)

Query: 4    YSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRS 63
            Y + L   + I  AI   F       +V+A+   LEL      G +    S  ++G I  
Sbjct: 3    YIVPLHHASSISNAITLQFMKPGEDCLVIAKSNRLELYTKAPDG-LALKYSKAVYGKISV 61

Query: 64   LAQF-RLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQET----FGKSGCRRIVPGQ 118
            L +  R   S+ D + VG+D      L +N +     ++H E           R    G 
Sbjct: 62   LQKLPRPNPSETDLLFVGTDRDAYFTLSWNSATG---QLHTEQKYVDMADPSLRDSQSGD 118

Query: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPL------EAHKSHTIVYSICGI 172
               VDP G+ + +   E    V  + ++   R ++S P        AH    +   I   
Sbjct: 119  RSWVDPSGKFLTLEIYEGIITVIPIAQEPLKRSSLSGPSLGPPKERAHLGEPVQARIE-- 176

Query: 173  DCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWS-------- 224
            +    +  F  +  D S   + +    +++ +  L   +L      V+ + S        
Sbjct: 177  ELAIRSTAF--LHQDSSRVPRIAILYESTDGRVKLKLRDLIYTRGVVNGEASVAEFHNVD 234

Query: 225  EPVDN---GANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGV 281
            E  DN   GA +LV VP       G+L+  E  + Y       V  +      LP E   
Sbjct: 235  ELYDNLELGAEILVPVPLP---LGGILILGEKCIKY-------VDTISNETITLPLEYNT 284

Query: 282  LIVSAATHRQKTLFFFLLQTEYGDIFKVTLEHDNEH-VSELKIKYFDTIPVTASMCVLKS 340
            + V+      +    +LL  +YG +F + L  D+ + V   K+         + +  L  
Sbjct: 285  VFVAWEQLDNQR---WLLADDYGRLFFLMLVLDSANAVRTWKVDLLGETSRASVLVHLGG 341

Query: 341  GYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVE 400
            G +F  S  G+                  S  +  TE  F+              I+ + 
Sbjct: 342  GVVFLGSHQGD------------------SHVIRITEGSFEI-------------IQTLS 370

Query: 401  SLMPIMDMRIANL----------FEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQL 450
            ++ PI+D  + +L          F     +I T  G     SLR +R G+ + ++ V   
Sbjct: 371  NIAPILDFTVMDLGHRGDTLTHEFSSGQARIVTGSGAFHDGSLRSVRSGVGMEDLGVLGA 430

Query: 451  PGVPSAVWTVKKNVNDEFDAYIVVSFNNATLVLSI---GETVEEVSDSGFLDTTPSLAVS 507
                + +W +     +E    ++++F N + V      GE  E+    G L    +L  S
Sbjct: 431  MEHITDLWGLSAFCAEENCDTLLLAFVNESRVFHFSPDGEVEEKDEFLGLLLGETTLHAS 490

Query: 508  LIGDDSLMQV--HPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE 565
             +    ++QV    + I  +  +  I  W   G + I     N   +V+ + G E + F+
Sbjct: 491  NLAGCRILQVTERTARITDVESELVIWHWSPSGHQKITAAAVNEQYLVLMIGGQEAVIFD 550

Query: 566  VDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL 625
            +    Q+   +  + +  V+ + + S P          +  +  +  I  ++  D + I 
Sbjct: 551  IASDIQVSGPKTFKANKQVSGVTLTSSPAQA------CIFCFPQSAEISIVNLTD-LTIR 603

Query: 626  SVQSVSSP----PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQL 681
              +++  P    P S+L   +  S         P SLF++  + +G +F   ++     L
Sbjct: 604  HTETLGEPGDAVPRSVLVANMIPS--------KPPSLFVS--MADGSVFSFSLNAEDYSL 653

Query: 682  SDSRSRFLGLRPPKLFSVVVGGRAAMLCLSS--RPWLGYIHRGRFLLTPLSYETLEYAAS 739
            S++    LG   P +F ++  G       ++   P L Y    R + + ++ +       
Sbjct: 654  SNANKLVLGSEAP-VFKLLPRGDGLFNVFATCDHPSLIYASEDRIVYSAVNSDKATRICH 712

Query: 740  FSSDQCVEGVVSVAGNALRVFTIERLGETFNETALPLRYTPRRFVLQPKKKLMVIIETDQ 799
            F++ +   G ++VA              T +E  + L    R   +Q    LM+     +
Sbjct: 713  FNA-EAYPGAIAVA--------------TPDEIKIALVDAERTTQIQ---TLMINGTVRR 754

Query: 800  GALTAEEREAAKKECFEAAGMGENGNGNMDQMENGDDENKYDPLSDE----QYGYPKAES 855
             A +A ER         A G+G         ++N ++   Y  LSDE    Q       S
Sbjct: 755  IAYSAAER---------AFGLG---TVRRSLVQNAEEVKSYFILSDEIMFRQLSVFDLNS 802

Query: 856  DKWVSCIRVLDPRSANTTCLLELQDNEAAFSICTVNFHDKEHGTLLAVGTAKGLQFWPKR 915
            ++ V C+               ++    AF+    N   K+   +  VGT+         
Sbjct: 803  NELVECV---------------IRTEHPAFNGQQNNGRPKD---IFIVGTSVLDPAEAPE 844

Query: 916  NIVAGYIHIYRFVEEGKSLELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLY-------- 967
            +   G I I+  V   + L ++ +  V G   AL    G+++A +   + +         
Sbjct: 845  SQTKGRILIFD-VGVNRELRMVSEFPVRGACRALAMVNGKIVAALMKSVVILSMKKGNSY 903

Query: 968  --DLGKKRLLRKCENKLFPNTIVSINTYRDRIYVGDIQESFHFCKYRRDE----NQLYIF 1021
              D+GK+   R           V ++   + I V D+ +S    +Y+  E    + L   
Sbjct: 904  SIDIGKESSYRTS------TAPVDLSVTDNIIVVADLMKSISLLEYQAGEAGQPDSLKEV 957

Query: 1022 ADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNG 1081
            A      W T A  I  +    +D  GN+  V L ++ +   E+D               
Sbjct: 958  ARHYQTLWTTTAAPIAENAFLVSDAEGNL--VVLNRNTTGVTEDDK-------------- 1001

Query: 1082 APNKMEEIVQFHVGDVVTSLQKASLVPGGGESVI----YGTVMGSL---GAMLAFSSRDD 1134
               +M+   +  +G +V  +++  L       VI      T  GS+   G +  F+    
Sbjct: 1002 --RRMQITSELRLGTMVNRIRRMDLQASQSSPVIPKAFLATTDGSIYLFGVIAQFAQ--- 1056

Query: 1135 VDFFSHLEMHMRQ--EHP---PLCGRDHMAYRSAYFPVKD---VIDGDLCEQFPTLSLDL 1186
             D    L+  +      P   P  G  + A++SA     +    +DG+L EQF    L++
Sbjct: 1057 -DLLMRLQSALASFVASPGGIPFSG--YRAFKSATRQADEPFRFVDGELVEQFLDCPLEV 1113

Query: 1187 QRKIADELDRTPGEI-LKKLEEIRNKI 1212
            Q  +  ++D    ++ L +L++I  ++
Sbjct: 1114 QEAVLAKMDGGGRDVTLSQLKDIVERL 1140


>gi|218438221|ref|YP_002376550.1| hypothetical protein PCC7424_1234 [Cyanothece sp. PCC 7424]
 gi|218170949|gb|ACK69682.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1188

 Score = 43.1 bits (100), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 19/104 (18%)

Query: 554 IALSGG--ELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTI 611
           I  SGG  ++I F     GQLL +  H   G      IA  P+GR    FLA G  D T+
Sbjct: 660 ILASGGDEQVIKFSTLSEGQLLNLSLHHNCG---IRSIAYSPDGR----FLASGGTDQTV 712

Query: 612 RILSLDPDDCMQILS-----VQSVSSPPESLLFLEVQASVGGED 650
           RI  L    C++ LS     V SV+  P+  L      + GG+D
Sbjct: 713 RIWDLSKGQCLKTLSGHLNWVWSVAFSPDGQLL-----ASGGDD 751


>gi|74212634|dbj|BAE31055.1| unnamed protein product [Mus musculus]
          Length = 261

 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)

Query: 2   YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAI 61
           Y Y +T Q+PT +   + G+F+  +   +++A+   LE+      G +  +    ++G I
Sbjct: 3   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-LRPVKEVGMYGKI 61

Query: 62  RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKI 101
             +  FR  G  KD + + +      ILEY  S    D I
Sbjct: 62  AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDII 101


>gi|296413028|ref|XP_002836220.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630029|emb|CAZ80411.1| unnamed protein product [Tuber melanosporum]
          Length = 836

 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 22/103 (21%)

Query: 528 DGRINEW---RTPGKRTIVKVGSNRLQVVIALSGGELI------YFEVDM----TGQLLE 574
           DG +  W   R    RT       +   + A   GE++       F++ +    TGQLLE
Sbjct: 406 DGSVRAWDLVRYRNFRTFAATSRLQFSTLAADPSGEIVCAGSLDNFDIHVWNVQTGQLLE 465

Query: 575 -VEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSL 616
            +  HE  G +A L  A  P+GR    FLA GS+DNT+RI SL
Sbjct: 466 ELSGHE--GPIASLSFA--PDGR----FLASGSWDNTVRIWSL 500


>gi|320040273|gb|EFW22206.1| hypothetical protein CPSG_00105 [Coccidioides posadasii str.
            Silveira]
          Length = 1387

 Score = 42.7 bits (99), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 153/404 (37%), Gaps = 98/404 (24%)

Query: 861  CIRVLDPRSANTTCLLELQDNEAAFSICTVNFH----DKEHGTLLAVGTA--KGLQFWPK 914
            CI++L PR+ +     EL D E    + T+N        E   +L VGTA  +G    P+
Sbjct: 1014 CIKLLSPRTWSVVDSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITPR 1073

Query: 915  RNIVAGYIHIYRFV---------EEGKSLELLHKTQVEGIPLALCQF--QGRLLAGIGPV 963
                 G I+++  +         E  + L++  K  V+G   A+     QG L+      
Sbjct: 1074 -----GSIYVFEIIEVAPDPDRPETNRKLKIFAKDDVKGAVTAVSGIGGQGFLIMA---- 1124

Query: 964  LRLYDLGKKRLLR--KCENKLFPNTIVSINTYRDRI---------YVGDIQESFHFCKYR 1012
                  G+K ++R  K +  L P   + +  Y   +          +GD  +   F  Y 
Sbjct: 1125 -----QGQKCMVRGLKEDGSLLPVAFMDMQCYVKVLKELQGTGLCIMGDALKGIWFAGYS 1179

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI----EEDPT 1068
             +  +L +F  D+    + AA     D +    +   +Y +    D +  +     EDPT
Sbjct: 1180 EEPYRLTLFGKDNEYLQVIAA-----DFLPDGKR---LYILVADDDCTIHVLEYDPEDPT 1231

Query: 1069 GGKIKWEQGKLNGAPNKMEEIVQFHVG---DVVTSLQKASLVPGGGE------------- 1112
              K            +++     FH+G     +T L + S  P   +             
Sbjct: 1232 SSK-----------GDRLLHRSSFHMGHFTSTMTLLPQHSSSPSADDPGEDDMDVDYVPK 1280

Query: 1113 --SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHM--RQEHPPLCGRDHMAYR---SAYF 1165
               V+  +  GS+G +    + D     S L+  +    EHP  CG +  AYR   S  F
Sbjct: 1281 SYQVLVTSQEGSIGVVTPL-TEDSYRRLSALQSQLVTSMEHP--CGLNPKAYRAVESDGF 1337

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
              + ++DG+L  ++  L + +QRK         G +   +E IR
Sbjct: 1338 GGRGIVDGNLLLRW--LDMGVQRKA-----EIAGRVGADIESIR 1374


>gi|303321596|ref|XP_003070792.1| CPSF A subunit region family protein [Coccidioides posadasii C735
            delta SOWgp]
 gi|240110489|gb|EER28647.1| CPSF A subunit region family protein [Coccidioides posadasii C735
            delta SOWgp]
          Length = 1394

 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 153/404 (37%), Gaps = 98/404 (24%)

Query: 861  CIRVLDPRSANTTCLLELQDNEAAFSICTVNFH----DKEHGTLLAVGTA--KGLQFWPK 914
            CI++L PR+ +     EL D E    + T+N        E   +L VGTA  +G    P+
Sbjct: 1021 CIKLLSPRTWSVVDSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITPR 1080

Query: 915  RNIVAGYIHIYRFV---------EEGKSLELLHKTQVEGIPLALCQF--QGRLLAGIGPV 963
                 G I+++  +         E  + L++  K  V+G   A+     QG L+      
Sbjct: 1081 -----GSIYVFEIIEVAPDPDRPETNRKLKIFAKDDVKGAVTAVSGIGGQGFLIMA---- 1131

Query: 964  LRLYDLGKKRLLR--KCENKLFPNTIVSINTYRDRI---------YVGDIQESFHFCKYR 1012
                  G+K ++R  K +  L P   + +  Y   +          +GD  +   F  Y 
Sbjct: 1132 -----QGQKCMVRGLKEDGSLLPVAFMDMQCYVKVLKELQGTGLCIMGDALKGIWFAGYS 1186

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI----EEDPT 1068
             +  +L +F  D+    + AA     D +    +   +Y +    D +  +     EDPT
Sbjct: 1187 EEPYRLTLFGKDNEYLQVIAA-----DFLPDGKR---LYILVADDDCTIHVLEYDPEDPT 1238

Query: 1069 GGKIKWEQGKLNGAPNKMEEIVQFHVG---DVVTSLQKASLVPGGGE------------- 1112
              K            +++     FH+G     +T L + S  P   +             
Sbjct: 1239 SSK-----------GDRLLHRSSFHMGHFTSTMTLLPQHSSSPSADDPGEDDMDVDYVPK 1287

Query: 1113 --SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHM--RQEHPPLCGRDHMAYR---SAYF 1165
               V+  +  GS+G +    + D     S L+  +    EHP  CG +  AYR   S  F
Sbjct: 1288 SYQVLVTSQEGSIGVVTPL-TEDSYRRLSALQSQLVTSMEHP--CGLNPKAYRAVESDGF 1344

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
              + ++DG+L  ++  L + +QRK         G +   +E IR
Sbjct: 1345 GGRGIVDGNLLLRW--LDMGVQRKA-----EIAGRVGADIESIR 1381


>gi|49619061|gb|AAT68115.1| cleavage and polyadenylation specificity factor 1 [Danio rerio]
          Length = 312

 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 115/305 (37%), Gaps = 53/305 (17%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLR-----------------P 43
           MY        PT +  A+  NF  ++   +VVA    L + R                  
Sbjct: 1   MYAVYRQAHPPTAVEFAVYCNFISSQEKNLVVAGTSQLYVYRIIYDVESTSKSEKSSDGK 60

Query: 44  ENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E + S  +FG + S+A  +L G+ +D +++     ++ ++EY+P  +    +  
Sbjct: 61  SRKEKLEQVASFSLFGNVMSMASVQLVGTNRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGR-AVMI--GACEKQKLVYVLNRDTAA------- 149
             F     + G  + V    + VDP+ R AVM+  G C    +V     DT A       
Sbjct: 121 HYFEEPELRDGFVQNVHIPMVRVDPENRCAVMLVYGTC---LVVLPFRNDTLADEQEGIV 177

Query: 150 ------RLTISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTGQAASEA 203
                     S  ++  +    + +I  ID  F +  +    L   E +Q   G+ A   
Sbjct: 178 GEGQKFSFLPSYIIDVRELDETLLNI--IDMKFLHGYYEPTLLILFEPNQTWPGRVAVR- 234

Query: 204 QKNLTFYELDLGLNHVSRK--WS---EPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYK 258
           Q   +   + L +        WS    P D    M V  P G     GV+V A N ++Y 
Sbjct: 235 QDTCSIVAISLNIMQKVHPVIWSLSNLPFDCNQVMAVPKPIG-----GVVVFAVNSLLYL 289

Query: 259 NQGHP 263
           NQ  P
Sbjct: 290 NQSVP 294


>gi|403302917|ref|XP_003942095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Saimiri boliviensis boliviensis]
          Length = 1390

 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 447 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEENPKGEGTEQ 505

Query: 470 --------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    +GDD  +
Sbjct: 506 EPSTPEADDDSRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNVGDDRYI 565

Query: 515 MQVHPSGIR 523
           +QV P GIR
Sbjct: 566 VQVSPLGIR 574


>gi|194374339|dbj|BAG57065.1| unnamed protein product [Homo sapiens]
          Length = 330

 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 108/300 (36%), Gaps = 43/300 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSVP 294


>gi|50305395|ref|XP_452657.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74606921|sp|Q6CTT2.1|CFT1_KLULA RecName: Full=Protein CFT1; AltName: Full=Cleavage factor two
           protein 1
 gi|49641790|emb|CAH01508.1| KLLA0C10274p [Kluyveromyces lactis]
          Length = 1300

 Score = 42.4 bits (98), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/126 (20%), Positives = 55/126 (43%), Gaps = 4/126 (3%)

Query: 10  QPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQFRL 69
           QPT +   ++GNF+  +  E VVAR  VL + R   + ++      ++ G I  +     
Sbjct: 9   QPTVVNKCLHGNFTSAEREEYVVARTNVLSVFRVSRAQKLVLAYEWKLAGKIIDMQLLPQ 68

Query: 70  TGSQKDYIVVGSDSGRIVILEYNPSKNVFDKI----HQETFGKSGCRRIVPGQYLAVDPK 125
            GS    + + S   ++ ++ ++P     + +    + + F       +     +AVDP 
Sbjct: 69  IGSPLKMLAILSSKSKVSLVRFDPVAESLETLSLHYYHDKFVNLSTSSLKTESIMAVDPL 128

Query: 126 GRAVMI 131
            R +++
Sbjct: 129 FRCLLV 134


>gi|413948668|gb|AFW81317.1| hypothetical protein ZEAMMB73_752618 [Zea mays]
          Length = 122

 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/98 (20%), Positives = 52/98 (53%), Gaps = 5/98 (5%)

Query: 1  MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLE--LLRPENSGRIETLVSTEIF 58
          ++ Y +T  +PT +  +  GNF+      +++A+   +E  LL P+    ++ ++   I+
Sbjct: 3  VWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59

Query: 59 GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKN 96
          G I ++  FR     +D++ + ++  +  +L+++  K+
Sbjct: 60 GRIATIELFRPHNETQDFLFIATERYKFCVLQWDTEKS 97


>gi|330799483|ref|XP_003287774.1| hypothetical protein DICPUDRAFT_32967 [Dictyostelium purpureum]
 gi|325082229|gb|EGC35718.1| hypothetical protein DICPUDRAFT_32967 [Dictyostelium purpureum]
          Length = 1453

 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 18/100 (18%)

Query: 11  PTGIIAAINGNFSGTKTPEIVVARGKVLEL-----LRPENSG-------------RIETL 52
           PTG+   I  N     T  +V+++   L++     ++ EN+               +E L
Sbjct: 13  PTGVEQCIKANLIDNDTINLVLSKNNTLQVYKIKYVKNENTTTQQKQIKKVEIKPSLELL 72

Query: 53  VSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYN 92
           +  ++FG I S+A  R  G  KD +++     +I +L+YN
Sbjct: 73  IELKLFGTIESMASVRYPGENKDSLLLTFRDAKISVLDYN 112


>gi|328872326|gb|EGG20693.1| hypothetical protein DFA_00554 [Dictyostelium fasciculatum]
          Length = 1355

 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 105/239 (43%), Gaps = 27/239 (11%)

Query: 420 QIFTLCGRGPR-SSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSF-N 477
           ++F +CG GP    +R+L    A+    + ++  + + +W+       + D   +VS  +
Sbjct: 607 KVFMICGGGPSFGGVRMLENCAAMD--IILKIRCLATGIWSYSY----QSDIITMVSLLS 660

Query: 478 NATLVL---SIGETVEEVSDSGFL-DTTPSLAVSLIGDDSLMQVHPSGIRHIR--EDGRI 531
           N T++    S  +  +  S+  F+ D T   +  +      +Q  P  IR +    D  +
Sbjct: 661 NETIIFQFYSNNDASDITSNCNFVTDQTTLYSGVMTNAKHYLQATPDRIRAVSCAFDTHV 720

Query: 532 NEWRTPGKRTIVKVGSNRLQVVIALS-GGELIYFEVDMTGQLLEVEKHEMSGDVACLDIA 590
           + +  P   +IV+  +    ++++LS    L++ E  + GQ ++        D++ + + 
Sbjct: 721 DWFPAPEYGSIVQCTNRESDIIVSLSRQNTLVHLEY-INGQFIQKSIRLFDSDISTIHLP 779

Query: 591 SVPEGRKR----------SRFLAVGSYDNTIRILSLDPDDCMQ-ILSVQSVSSPPESLL 638
           +                 S++L VG+Y N I ILS+D D  +  I S   + + P S++
Sbjct: 780 NSFVVSSFSRSTSQSQILSKYLFVGTYTNEIHILSMDDDKLLSTIYSYCQLQAIPHSIV 838


>gi|119602515|gb|EAW82109.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform
           CRA_b [Homo sapiens]
          Length = 377

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 108/300 (36%), Gaps = 43/300 (14%)

Query: 1   MYLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSG------------- 47
           MY        PTG+  ++  NF       +VVA    L + R                  
Sbjct: 1   MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK 60

Query: 48  ----RIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQ 103
               ++E   S   FG + S+A  +L G+++D +++     ++ ++EY+P  +    +  
Sbjct: 61  AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL 120

Query: 104 ETFG----KSGCRRIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEA 159
             F     + G  + V    + VDP GR   +     + +V    R++ A        E 
Sbjct: 121 HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG 180

Query: 160 HKSHTIVYSICG-----------IDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKNLT 208
            +S  +   I             ID  F +  +    L   E +Q   G+ A   Q   +
Sbjct: 181 QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVR-QDTCS 239

Query: 209 FYELDLGLNHVSRK--W---SEPVDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHP 263
              + L +        W   S P D    + V  P G     GV+V A N ++Y NQ  P
Sbjct: 240 IVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIG-----GVVVFAVNSLLYLNQSVP 294


>gi|221116994|ref|XP_002166173.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
          magnipapillata]
          Length = 107

 Score = 42.0 bits (97), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 2  YLYSLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLEL--LRPENSGRIETLVSTEIFG 59
          Y Y +T Q+ T I A + G+F+G     ++VA+   LEL  + PE    ++      ++G
Sbjct: 3  YNYVVTAQEATAINATVTGHFTGPTDLNLIVAKNNKLELHMVTPEG---LQPKFDLNVYG 59

Query: 60 AIRSLAQFRLTGSQKDYIVVGSDSGRIVILEY 91
           +  +  FR     +D + + ++  R  IL Y
Sbjct: 60 RVAVMQLFRPQNENQDLLFILTERYRTAILAY 91


>gi|198457226|ref|XP_001360595.2| GA10080 [Drosophila pseudoobscura pseudoobscura]
 gi|198135905|gb|EAL25170.2| GA10080 [Drosophila pseudoobscura pseudoobscura]
          Length = 1459

 Score = 42.0 bits (97), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 132/314 (42%), Gaps = 60/314 (19%)

Query: 457 VWTV------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
           VWTV      K + +D+ D ++++S +N+TLVL  G+ + E+ ++GF     ++ V  +G
Sbjct: 566 VWTVFDDATKKTSRHDQHD-FMLLSQSNSTLVLQTGQEINEIENTGFTVNQATIFVGNLG 624

Query: 511 DDS-LMQVHPSGIRHIREDGRINEWRTPGKRTI----VKVGSNRLQVVIA-------LSG 558
               ++QV     RH+R           G R I    + VGS  +QV IA       +  
Sbjct: 625 QQRFIVQV---TTRHVR--------LLQGTRLIQNVPIDVGSPVVQVAIADPYVCLRMLN 673

Query: 559 GELIYFEVDMT--GQLLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSL 616
           G++I   +  T     L + KH ++   A                +A+ +Y +   + ++
Sbjct: 674 GQVITLALRETRGSPRLAINKHTITSSPAV---------------VAIAAYKDLSGLFTV 718

Query: 617 DPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDM 676
             DD + +              +++ + ++  ED  D    L+ +AG    +    V+  
Sbjct: 719 KSDDVLNLTGGSGSGFGHSFGGYMKAEPNMKVEDEED---LLYGDAGNAFKINSMAVLAQ 775

Query: 677 VTGQLSDSRSRFLGLRPPKLFSVVVGGRAAMLCLSSRPWLGYIHR------GRFLLTPLS 730
            + Q +    R L ++    + +VV  ++  L + S P +  ++       G  +L+   
Sbjct: 776 QSKQKNSDWWRRLLVQAKPSYWLVVSRKSGTLEIYSMPDMKLVYHINDVGNGAMVLS--- 832

Query: 731 YETLEYAASFSSDQ 744
            + LE+ +  SS Q
Sbjct: 833 -DALEFVSLSSSTQ 845


>gi|119195757|ref|XP_001248482.1| hypothetical protein CIMG_02253 [Coccidioides immitis RS]
 gi|121769680|sp|Q1E5B0.1|CFT1_COCIM RecName: Full=Protein CFT1; AltName: Full=Cleavage factor two protein
            1
 gi|392862316|gb|EAS37050.2| protein CFT1 [Coccidioides immitis RS]
          Length = 1387

 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 152/404 (37%), Gaps = 98/404 (24%)

Query: 861  CIRVLDPRSANTTCLLELQDNEAAFSICTVNFH----DKEHGTLLAVGTA--KGLQFWPK 914
            CI++L PR+ +     EL D E    + T+N        E   +L VGTA  +G    P+
Sbjct: 1014 CIKLLSPRTWSVVDSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITPR 1073

Query: 915  RNIVAGYIHIYRFV---------EEGKSLELLHKTQVEGIPLALCQF--QGRLLAGIGPV 963
                 G I+++  +         E  + L++  K  V+G   A+     QG L+      
Sbjct: 1074 -----GSIYVFEIIEVAPDPDRPETNRKLKIFAKDDVKGAVTAVSGIGGQGFLIMA---- 1124

Query: 964  LRLYDLGKKRLLR--KCENKLFPNTIVSINTYRDRI---------YVGDIQESFHFCKYR 1012
                  G+K ++R  K +  L P   + +  Y   +          +GD  +   F  Y 
Sbjct: 1125 -----QGQKCMVRGLKEDGSLLPVAFMDMQCYVKVLKELQGTGLCIMGDALKGIWFAGYS 1179

Query: 1013 RDENQLYIFADDSVPRWLTAAHHIDFDTMAGADKFGNIYFVRLPQDVSDEI----EEDPT 1068
             +  +L +F  D+    + AA     D +    +   +Y +    D +  +     EDPT
Sbjct: 1180 EEPYRLTLFGKDNEYLQVIAA-----DFLPDGKR---LYILVADDDCTIHVLEYDPEDPT 1231

Query: 1069 GGKIKWEQGKLNGAPNKMEEIVQFHVG---DVVTSLQKASLVPGGGE------------- 1112
              K            +++     FH G     +T L + S  P   +             
Sbjct: 1232 SSK-----------GDRLLHRSSFHTGHFTSTMTLLPEHSSSPSADDPEEDDMDVDYVPK 1280

Query: 1113 --SVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHM--RQEHPPLCGRDHMAYR---SAYF 1165
               V+  +  GS+G +    + D     S L+  +    EHP  CG +  AYR   S  F
Sbjct: 1281 SYQVLVTSQEGSIGVVTPL-TEDSYRRLSALQSQLVTSMEHP--CGLNPKAYRAVESDGF 1337

Query: 1166 PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 1209
              + ++DG+L  ++  L + +QRK         G +   +E IR
Sbjct: 1338 GGRGIVDGNLLLRW--LDMGVQRKA-----EIAGRVGADIESIR 1374


>gi|9794906|gb|AAF98387.1| cleavage and polyadenylation specificity factor [Drosophila
           melanogaster]
          Length = 279

 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 23/110 (20%)

Query: 457 VWTV------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
           VWTV      K + ND+ D ++++S  N+TLVL  G+ + E+ ++GF    P++ V  +G
Sbjct: 169 VWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTGQEINEIENTGFTVNQPTIFVGNLG 227

Query: 511 DDS-LMQVHPSGIRHIREDGRINEWRTPGKRTI----VKVGSNRLQVVIA 555
               ++QV     RH+R           G R I    + VGS  +QV IA
Sbjct: 228 QQRFIVQV---TTRHVR--------LLQGTRLIQNVPIDVGSPVVQVSIA 266


>gi|194756960|ref|XP_001960738.1| GF11349 [Drosophila ananassae]
 gi|190622036|gb|EDV37560.1| GF11349 [Drosophila ananassae]
          Length = 1455

 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 32/155 (20%)

Query: 457 VWTV------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
           VWTV      K + +D+ D ++++S  N+TLVL  G+ + E+ ++GF    P++ V  +G
Sbjct: 563 VWTVFDDATKKTSRHDQHD-FMLLSQRNSTLVLQTGQEINEIENTGFTVNQPTIFVGNLG 621

Query: 511 DDS-LMQVHPSGIRHIREDGRINEWRTPGKRTI----VKVGSNRLQVVIA-------LSG 558
               ++QV     RH+R           G R I    + VGS  +QV IA       +  
Sbjct: 622 QQRFIVQV---TTRHVR--------LLQGTRLIQNVPIDVGSPVVQVSIADPYVCLRVLN 670

Query: 559 GELIYFEVDMT--GQLLEVEKHEMSGDVACLDIAS 591
           G++I   +  T     L + KH +S   A + I++
Sbjct: 671 GQVITLALRETRGTPRLAINKHTISSSPAVVAISA 705


>gi|83649051|ref|YP_437486.1| WD-40 repeat-containing protein [Hahella chejuensis KCTC 2396]
 gi|83637094|gb|ABC33061.1| FOG: WD40 repeat [Hahella chejuensis KCTC 2396]
          Length = 326

 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 36/207 (17%)

Query: 426 GRGPRSSLRILRPGL---AVSEMAVSQLPGV---PSAVWTVKKNVNDEFDAYIVVSFNNA 479
           G+GP SSL++ + GL    +S  A   L G      ++W V KN         + ++N+ 
Sbjct: 27  GKGPESSLKVAQQGLLSAGLSADAGYALIGSLQHGGSLWGVGKNER-------LYNWNHE 79

Query: 480 TLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGK 539
               S    V    D+        LA++ +  D         + ++ +   +N WR P K
Sbjct: 80  QGEFSTIRAVAMADDA-------KLAITAVDAD-------LAVWNVLDGRSLNFWRAPDK 125

Query: 540 RTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSGDVACLDIASVPEGRKRS 599
            + + +G N    ++ +   + +YF+++  GQ      H+   +V  +DI+        S
Sbjct: 126 ISSIAIGPNNKYALLGMRSNQAVYFDLE-KGQARYEFPHK--AEVTSVDISG------DS 176

Query: 600 RFLAVGSYDNTIRILSLDPDDCMQILS 626
           R+   GS D + R+  LD    M   S
Sbjct: 177 RWAITGSDDQSARLWRLDTGALMHTFS 203


>gi|402879380|ref|XP_003903320.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 1 [Papio anubis]
          Length = 1389

 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E +          
Sbjct: 446 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEEDNPKGEGTEQ 504

Query: 470 --------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  +
Sbjct: 505 EARSPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYI 564

Query: 515 MQVHPSGIR 523
           +QV P GIR
Sbjct: 565 VQVSPLGIR 573


>gi|410911304|ref|XP_003969130.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Takifugu rubripes]
          Length = 1444

 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 25/128 (19%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKN--VNDEFD-------- 469
           ++    G G   +L +L+  +    +   +LPG    +WTV  N  V  E +        
Sbjct: 500 EVVVCSGHGKNGALSVLQRSIRPQVVTTFELPGC-HDMWTVISNEPVQKEQEETEREGKE 558

Query: 470 -------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-LM 515
                         ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  ++
Sbjct: 559 KTEPPAEEDTKKHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNKYII 618

Query: 516 QVHPSGIR 523
           QV P GIR
Sbjct: 619 QVSPMGIR 626


>gi|291232722|ref|XP_002736302.1| PREDICTED: cleavage and polyadenylation specific factor 1-like
           [Saccoglossus kowalevskii]
          Length = 984

 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 24/127 (18%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV------------KKNVNDE 467
           ++  L G     +L +L+  +    +   +LPG    +WTV            K+   +E
Sbjct: 131 ELVALSGYSKNGALSVLQRSIRPQVVTTFELPGCID-MWTVVGPPEKENKDQPKEKTEEE 189

Query: 468 FD----------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-LMQ 516
            D          A++++S ++++++LS G+ + E+  SGF    P++    +G+++ ++Q
Sbjct: 190 GDKKPDALTNGHAFLILSRDDSSMILSTGQEIMELDHSGFSTQGPTVYAGNLGNNAYILQ 249

Query: 517 VHPSGIR 523
           V P G+R
Sbjct: 250 VSPMGVR 256


>gi|384916199|ref|ZP_10016374.1| conserved exported hypothetical protein [Methylacidiphilum
           fumariolicum SolV]
 gi|384526394|emb|CCG92245.1| conserved exported hypothetical protein [Methylacidiphilum
           fumariolicum SolV]
          Length = 1361

 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 26/147 (17%)

Query: 5   SLTLQQPTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSL 64
           +L++ +PTGI+ A NG          +  RG    +++ +  G I   +STE+   I   
Sbjct: 541 TLSINKPTGIVTAPNGQLYA------ISGRG----VVKIDQEGNITPFISTELEAPI--- 587

Query: 65  AQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKIHQETFGKSGCRRIVPGQYLAVDP 124
               +   QK  I + SD GR + ++    + VF +      GK G R ++ G Y   DP
Sbjct: 588 ---GIAVDQKGQIYI-SDWGRAMNVKVFSKEGVFLR----EIGKKGGRPLI-GSY---DP 635

Query: 125 KGRAVMIGAC-EKQKLVYVLNRDTAAR 150
           +G  +  G C +K+  ++V+  D + R
Sbjct: 636 RGMFLPFGICIDKENRLWVVEWDRSPR 662


>gi|320593036|gb|EFX05445.1| uv-damaged DNA-binding protein [Grosmannia clavigera kw1407]
          Length = 1504

 Score = 41.2 bits (95), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 160/784 (20%), Positives = 283/784 (36%), Gaps = 130/784 (16%)

Query: 38   LELLRPENSGRIETLVSTEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNPSKNV 97
            +E+ R      +    S  IFG I  L   R   S+ + + VG+D      L ++   + 
Sbjct: 349  VEIWRITEDDHLVLFHSQMIFGTISMLQSLRPIDSKTELLFVGTDRFEYFTLTWDMESHS 408

Query: 98   FDKIHQETFGKSGCRRIVPGQ---YLAVDPKGRAVMIGACEKQKLVYVLN--RDTAARLT 152
               +  +TF   G + +   Q      VDP GR + +   E    V  L   RD A    
Sbjct: 409  LRTV--DTFQDVGEKHLRDSQSQDRCLVDPSGRFMALLLWEGVLTVLRLQTRRDRAR--- 463

Query: 153  ISSPLEAHKSHTIVYSICGIDCGFDNPIFAAIELDYSEADQDSTG----QAASEAQKNLT 208
                   H  H +      +   F      A    +SE  Q             A+  L+
Sbjct: 464  -----PDHMRHLVPMDQVRLSELF----IKASTFLHSETGQPQIAFLYQSQGDRAEAKLS 514

Query: 209  FYELDLGLNHVS---------RKWSEPVDN-GANMLVTV--------------PGGGDGP 244
             Y L  G  +V          R+ S  +D+ GA +L+ V                     
Sbjct: 515  AYRLTAGDRNVDTGRFDANRDREISMDIDDPGAALLIPVEKVEPAKRHNVRNTATATANL 574

Query: 245  SGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKTLFFFLLQTEYG 304
             G+LV  E  ++Y       + +      ++P     + V+ A +       +LL  EYG
Sbjct: 575  GGLLVVGETRLLY-------IDSTTKCTVEVPLRAASIFVAWARYDAT---HYLLADEYG 624

Query: 305  DIFKVTLEHDNEHVSELKIKYFDTIPVTASMCVL-KSGYLFAASEFGNHALYQFQAIGAD 363
             +  +T+      V  L +         + +  L     LF  S  G+  L++       
Sbjct: 625  TLHLLTILVSGAVVDNLDVSPIGKTSRASCLVYLPDRRLLFVGSHNGDSQLFRL------ 678

Query: 364  PDVEASSSTLMETEEGFQPVFFQPRGLKNLVRIEQVESLM--PIMDM-------RIANLF 414
             D+ AS                 P GL  L  ++ +  ++   +MDM       ++AN +
Sbjct: 679  -DLAAS-----------------PVGLHELQVLQNIAPVLDFTVMDMGNREDDQQLANEY 720

Query: 415  EEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDAY--I 472
                 +I T  G     SLR +R G+ + ++ +    G    +++++     +      +
Sbjct: 721  ASGQARIVTGSGVHKDGSLRSVRSGVGLEDIGILGDLGGVRGLFSLRSPQTQQQQQVDTL 780

Query: 473  VVSFNNATLVLSI---GETVEEVSDSGF-LDTTPSLAVSLIGDDS----LMQVHPSGIR- 523
            V SF   T V      GE  E  +  G  L T   LA +L    S    L+Q+ P  +  
Sbjct: 781  VASFLTETRVFLFDGDGEIEEVEAFPGLNLGTQTLLATNLSSGSSSSSRLLQITPGSVTL 840

Query: 524  -HIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLLEVEKHEMSG 582
                    +  W  P  RTIV   +N   V++++ G  L+   +D +  +   ++   + 
Sbjct: 841  AETASGTIVASWTPPDDRTIVSASANSRWVLLSVEGTTLVSLSLDNSLAVAAQKEVGTTD 900

Query: 583  DVACLDIASVPE-------GRKRSRFLAVGSYDNTIRILSLDPDDCMQILSVQ-SVSSPP 634
             +ACL  A  P+       G+  S  ++V      + + +L+P    + L  +   +S P
Sbjct: 901  QIACLHAA--PQLLDVGVVGQWASGMVSV------VDLATLEPKHGGKSLRRRDDNASVP 952

Query: 635  ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRPP 694
             S++  +V        G   P +LF+   + +G +    V      LS  +S  LG R  
Sbjct: 953  RSIVLAQVLPP-----GMAGP-TLFV--AMDDGNVITFAVSPSDLSLSGRKSVVLGTRHA 1004

Query: 695  KLFSVVVGGRA--AMLCLSSRPWLGYIHRGRFLLTPLSYETLEYAASFSSDQCVEGVVSV 752
            +L  +     A  ++   +  P L Y   GR     ++ E   +   F +     G ++V
Sbjct: 1005 RLHPLPQSDEATYSIFATTEHPSLIYGSEGRIAYAAVTAEDANFVCHFDA-AAFPGAIAV 1063

Query: 753  AGNA 756
            A ++
Sbjct: 1064 ATDS 1067


>gi|452825139|gb|EME32137.1| cleavage and polyadenylation specificity factor subunit-like protein
            [Galdieria sulphuraria]
          Length = 1454

 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 10/127 (7%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCEN----KLFPNTIVS 989
            L L+ + +++ +  ++ + +G +   +GP + +Y L  +  L  C      +LF     S
Sbjct: 1164 LMLIAEKELKSVVSSIARLEGYICCAVGPKVEIYKLVNESELVCCSFYSGFQLFST---S 1220

Query: 990  INTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHHI---DFDTMAGADK 1046
            INT +  ++VGD+ +  +F  +R     L     D  P    +   +   +F     +D 
Sbjct: 1221 INTVKQYVFVGDMYKGGYFLFWRDRNKSLNFLGKDFDPVQTLSTEFLILNEFILFVVSDN 1280

Query: 1047 FGNIYFV 1053
            FGN++ +
Sbjct: 1281 FGNLHLL 1287



 Score = 40.8 bits (94), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 111/253 (43%), Gaps = 27/253 (10%)

Query: 330 PVTASMCVLKSGYLFAASEFGNHALYQFQAIGADPDVEASSSTLMETEEGFQPVFFQPRG 389
           P T S C   +G +F  S     AL +         +   +ST +  E+     FF    
Sbjct: 397 PSTVSYC--GNGLIFLGSHVSPSALLE---------IIWKNSTELHPEDDELESFFGKSS 445

Query: 390 LKNLVRIEQVES------LMPIMDMRIANLFEEEAPQIFTLCGRGPRS--SLRILRPGLA 441
            KN V +E ++S      + PI D+ + +     + ++  +   G R+  ++ I R  ++
Sbjct: 446 NKNFV-VETIDSRDSLFCIGPIQDLEVFDNIIGSSRKMELIAAVGSRNYGAVIIFRRTVS 504

Query: 442 VSEMAVSQLPGVPSAVWTV----KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGF 497
            S +   +L      +W V    K    +     +++S    T+VLS+ +T++E+ DS F
Sbjct: 505 PSLLTSIRLEDC-QQIWNVLCQRKMGERNGSVPLLILSTQRNTIVLSVSDTIDELVDSQF 563

Query: 498 LDTTPSLAVS-LIGDDSLMQVHPSGIRHI-REDGRINEWRTPGKRTIVKVGSNRLQVVIA 555
             ++ +L VS ++ D  ++QV   G+R +   D  I+ +  P    + +       V++ 
Sbjct: 564 QTSSRTLWVSRVLHDRYIIQVFDEGLRILGNWDSLISLYELPPGDVVTQAFVCDPYVMLH 623

Query: 556 LSGGELIYFEVDM 568
           LS   L+  ++ +
Sbjct: 624 LSSSYLVILKISL 636


>gi|395004350|ref|ZP_10388413.1| ribosomal protein S6 [Acidovorax sp. CF316]
 gi|394317716|gb|EJE54218.1| ribosomal protein S6 [Acidovorax sp. CF316]
          Length = 125

 Score = 40.8 bits (94), Expect = 4.8,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 936  LLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIVSINTYRD 995
            L+H  Q E +P  L +++G + AG G V R+ D G+++L     NKL     + +N   D
Sbjct: 9    LIHPDQSEQVPAMLERYKGMITAGGGKVHRVEDWGRRQLAYLI-NKLAKAHYLCVNIEAD 67

Query: 996  RIYVGDIQESFHF 1008
            +  V +++ +F F
Sbjct: 68   QAVVAELEHAFKF 80


>gi|195150431|ref|XP_002016158.1| GL10645 [Drosophila persimilis]
 gi|194110005|gb|EDW32048.1| GL10645 [Drosophila persimilis]
          Length = 1459

 Score = 40.4 bits (93), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 32/155 (20%)

Query: 457 VWTV------KKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIG 510
           VWTV      K + +D+ D ++++S +N+TLVL  G+ + E+ ++GF     ++ V  +G
Sbjct: 566 VWTVFDDATKKTSRHDQHD-FMLLSQSNSTLVLQTGQEINEIENTGFTVNQATIFVGNLG 624

Query: 511 DDS-LMQVHPSGIRHIREDGRINEWRTPGKRTI----VKVGSNRLQVVIA-------LSG 558
               ++QV     RH+R           G R I    + VGS  +QV IA       +  
Sbjct: 625 QQRFIVQV---TTRHVR--------LLQGTRLIQNVPIDVGSPVVQVAIADPYVCLRMLN 673

Query: 559 GELIYFEVDMT--GQLLEVEKHEMSGDVACLDIAS 591
           G++I   +  T     L + KH ++   A + IA+
Sbjct: 674 GQVITLALRETRGSPRLAINKHTITSSPAVVAIAA 708


>gi|149512998|ref|XP_001514888.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like, partial [Ornithorhynchus anatinus]
          Length = 831

 Score = 40.4 bits (93), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE------------ 467
           +I    G G   +L +L+  +    +   +LPG    +WTV   V  E            
Sbjct: 323 EIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPVRKEEGDSPKGEGAES 381

Query: 468 ------------FDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    IGDD  +
Sbjct: 382 EPTPPEPEDDGKRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVYAGNIGDDRYI 441

Query: 515 MQVHPSGIR 523
           +QV P G+R
Sbjct: 442 VQVSPLGLR 450


>gi|395740218|ref|XP_002819588.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Pongo abelii]
          Length = 1388

 Score = 40.4 bits (93), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFD---------- 469
           +I    G G   +L +L+  +    +   +LPG    +WTV   +  E +          
Sbjct: 447 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGC-YDMWTVIAPLRKEEEDNPKGEGTEQ 505

Query: 470 --------------AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS-L 514
                          ++++S  ++T++L  G+ + E+  SGF    P++    IGD+  +
Sbjct: 506 EPSTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYI 565

Query: 515 MQVHPSGIR 523
           +QV P GIR
Sbjct: 566 VQVSPLGIR 574


>gi|49619065|gb|AAT68117.1| cleavage and polyadenylation specific factor 1 [Danio rerio]
          Length = 1105

 Score = 40.0 bits (92), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 28/131 (21%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV------------------- 460
           ++    G G   +L +L+  +    +   +LPG    +WTV                   
Sbjct: 155 EVVVCSGYGKNGALSVLQKSIRPQVVTTFELPGC-HDMWTVIYCEEKPEKPSAEGDGESP 213

Query: 461 ---KKNVNDEFD----AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS 513
              K+    E D     ++++S  ++T++L  G+ + E+  SGF    P++    IGD+ 
Sbjct: 214 EEEKREPTIEDDKKKHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVYAGNIGDNK 273

Query: 514 -LMQVHPSGIR 523
            ++QV P GIR
Sbjct: 274 YIIQVSPMGIR 284


>gi|386848438|ref|YP_006266451.1| hypothetical protein ACPL_3488 [Actinoplanes sp. SE50/110]
 gi|359835942|gb|AEV84383.1| hypothetical protein ACPL_3488 [Actinoplanes sp. SE50/110]
          Length = 447

 Score = 40.0 bits (92), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 39/234 (16%)

Query: 397 EQVESLMPIMDMRIANLFEEEAPQIFTLCGRGP-RSSLRILRPGLAVSEMAVSQLPGVPS 455
           +Q +S+ PI  +R+     E    +F   G  P R ++     G  + E ++     V S
Sbjct: 155 QQRQSVEPIALLRLVEAHRECLSTLFRNAGTDPVRKTI-----GHMLGEASI-----VAS 204

Query: 456 AVWTVKKNVNDEFDAYIVVSFNNATLVLSIGETVEEVSDSG----FLDTTPSLAVSLIGD 511
            +W+   N N        ++  +      + E +++V+       F     S A +LIG 
Sbjct: 205 RLWSAHGNRN--------MALAHCAYAKQLAERIDDVALGATARIFGSNLHSEASTLIGP 256

Query: 512 DSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQ 571
           D  + V   G+R + E   ++E  TP  R   ++ + + Q   +L         +D    
Sbjct: 257 DGDVMV---GLRLLEEAATVSERLTPAAR--ARIAAEQAQTYASLRLHRPAEEALD---- 307

Query: 572 LLEVEKHEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTIRILSLDPDDCMQIL 625
                 HE +GD+   D   +     RSR   V  YD T R+L  DP+  + IL
Sbjct: 308 ----RAHEAAGDITSEDRVGLYSDWNRSR---VEVYDGTCRLLLGDPEKAVAIL 354


>gi|159155577|gb|AAI54419.1| Cpsf1 protein [Danio rerio]
          Length = 400

 Score = 40.0 bits (92), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 28/131 (21%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTV------------------- 460
           ++    G G   +L +L+  +    +   +LPG    +WTV                   
Sbjct: 109 EVVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCHD-MWTVIYCEEKPEKPSAEGDGESP 167

Query: 461 ---KKNVNDEFD----AYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDS 513
              K+    E D     ++++S  ++T++L  G+ + E+  SGF    P++    IGD+ 
Sbjct: 168 EEEKREPTIEDDKKKHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVYAGNIGDNK 227

Query: 514 -LMQVHPSGIR 523
            ++QV P GIR
Sbjct: 228 YIIQVSPMGIR 238


>gi|307191845|gb|EFN75271.1| Cleavage and polyadenylation specificity factor subunit 1
           [Harpegnathos saltator]
          Length = 1214

 Score = 40.0 bits (92), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 11/114 (9%)

Query: 420 QIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDE---------FDA 470
           ++ T  G G   +L +L+  +    +   +LPG    +WTV  ++N++           A
Sbjct: 304 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGC-EDMWTVIGSLNNDEQVKSETEGSHA 362

Query: 471 YIVVSFNNATLVLSIGETVEEVSDSGF-LDTTPSLAVSLIGDDSLMQVHPSGIR 523
           ++++S  ++T+VL  G+ + EV  SGF    +   A +L  +  ++QV   G+R
Sbjct: 363 FLILSQEDSTMVLQTGQEINEVDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVR 416


>gi|241060959|ref|XP_002408050.1| cleavage and polyadenylation specificity factor, putative [Ixodes
            scapularis]
 gi|215492346|gb|EEC01987.1| cleavage and polyadenylation specificity factor, putative [Ixodes
            scapularis]
          Length = 1241

 Score = 40.0 bits (92), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 57/284 (20%), Positives = 127/284 (44%), Gaps = 24/284 (8%)

Query: 934  LELLHKTQVEGIPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKC--ENKLFPNTIVSIN 991
            +++++  + +G   AL Q  G LL+ IG  + ++ L    L+     + +++ +++V++ 
Sbjct: 956  IKIVYSKEQKGPVTALSQVVGFLLSAIGQKMYIWQLKDNGLVGVAFIDTQIYIHSVVTV- 1014

Query: 992  TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTAAHH-IDFDTMAG--ADKFG 1048
              ++ I VGD+ +S    +Y+     L + + D  P  + A    ID   M+    D   
Sbjct: 1015 --KNLILVGDVFKSVSLLRYQEASRTLSLVSRDVRPLEVFAVEFFIDNSQMSFLVTDSER 1072

Query: 1049 N-IYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN-GAPNKMEEIVQFHVGDVVTSLQKASL 1106
            N I ++  P+        +  GG+    +G  + G+P      ++  +G+V    ++ + 
Sbjct: 1073 NMILYMYQPES------RESCGGQRLLRRGDFHIGSPVVSMFRIKCRMGEVAKHDRRLAA 1126

Query: 1107 VPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYF- 1165
               G    +  T+ GSLG +L    +        L+  +    P   G +  A+R  +  
Sbjct: 1127 SVDGRHITMLATLDGSLGYVLPVPEKTYRRLLM-LQNVLVTNMPHYAGLNPKAFRMYHSQ 1185

Query: 1166 ------PVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILK 1203
                  P K+++DG+L  +F  LS   + +++ ++  T  ++++
Sbjct: 1186 RRVLGNPHKNILDGELIWKFMHLSFMERSELSKKIGTTVTQVVQ 1229


>gi|50288865|ref|XP_446862.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74609915|sp|Q6FSD2.1|CFT1_CANGA RecName: Full=Protein CFT1; AltName: Full=Cleavage factor two
           protein 1
 gi|49526171|emb|CAG59795.1| unnamed protein product [Candida glabrata]
          Length = 1361

 Score = 39.7 bits (91), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 11  PTGIIAAINGNFSGTKTPEIVVARGKVLELLRPENSGRIETLVSTEIFGAIRSLAQF--- 67
           PT +  ++ G+F+ T   E++V R  VL + +P  SGR+  +   ++ G I  +A     
Sbjct: 10  PTVVSHSVCGHFTTTDYLELIVIRTDVLSIYKPIRSGRLYLMEEHKLSGRINDVALIPKH 69

Query: 68  ----RLTGSQKDYIVVGSDSGRIVILEYNPSKNVFDKI----HQETFGKSGCRRIVPGQY 119
                  G    Y+++ +   ++ +L YN   +  + I    +++ F  +    +     
Sbjct: 70  SNGSNGNGINLSYLLLSTGVAKLSLLMYNNMTSSIETISLHFYEDKFESATMLDLARNSQ 129

Query: 120 LAVDPKGRAVMI 131
           L ++P G   M+
Sbjct: 130 LRIEPNGNYAML 141


>gi|408391284|gb|EKJ70664.1| hypothetical protein FPSE_09174 [Fusarium pseudograminearum CS3096]
          Length = 1333

 Score = 39.7 bits (91), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 130/324 (40%), Gaps = 39/324 (12%)

Query: 411 ANLFEEEAPQIFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKNVNDEFDA 470
           A   +++  +IF   GRGPRSSL  LR G+                 W     +  E   
Sbjct: 500 ATNLKQKPDRIFCTSGRGPRSSLTELRWGIQARIGLEFDYDQPVRQSWMFPIEIQGEKGF 559

Query: 471 YIVVSFNNATLVLSIGETVEEV----SDSGFLDTTPSLAVSLIGDD--SLMQVHPSGIRH 524
           Y V+S  +++ VL     +       SD+   DT+ S  +S I +D  +++QV  +    
Sbjct: 560 YAVLSLPHSSDVLHFPADLSNASALSSDACPFDTS-SRTISAIKNDQGTIVQVTETSTSF 618

Query: 525 IR--EDGRINEWRTPGKRTIVKVGSNRLQVVIALS-----GGELIYFEVDMTGQLLEVEK 577
           I   +  R +     GK ++V   ++    +I LS     G  +    VD    LL    
Sbjct: 619 IAPFQSSRHSHDEACGKTSLVADHASCFDDIIVLSSHGAYGSRIDVLRVDEM-NLLHSTS 677

Query: 578 HEMSGDVACLDIASVPEGRKRSRFLAVGSYDNTI---RILSLDPDDCMQILSVQSVSSPP 634
            +  G++ CL +      +    ++  GS  +++    I SL+  +        ++ +  
Sbjct: 678 FDAKGEITCLGLFK----KSLETYIVAGSVKDSVPCMTIYSLEGREISSKAPQPNIDAAD 733

Query: 635 ESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSD--SRSRF---- 688
           +  LF +++A    +  +D    + L  G + G        +VT +L D    S F    
Sbjct: 734 QEPLF-QIEAYTSVDAISDTAEKVILVFGTRTG-------HVVTVELEDGLEHSSFAIEQ 785

Query: 689 LGLRPPKLFSV---VVGGRAAMLC 709
           LGL P  +F+      G  AA++C
Sbjct: 786 LGLSPANVFATSGRFDGSHAALVC 809


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.137    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,486,461,320
Number of Sequences: 23463169
Number of extensions: 858280648
Number of successful extensions: 1936009
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 389
Number of HSP's that attempted gapping in prelim test: 1928702
Number of HSP's gapped (non-prelim): 2423
length of query: 1213
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 1059
effective length of database: 8,745,867,341
effective search space: 9261873514119
effective search space used: 9261873514119
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 83 (36.6 bits)