Query 000946
Match_columns 1212
No_of_seqs 199 out of 317
Neff 3.9
Searched_HMMs 46136
Date Thu Mar 28 11:25:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000946.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000946hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0916 1,3-beta-glucan syntha 100.0 0E+00 0E+00 3383.0 73.2 1136 18-1209 525-1678(1679)
2 PF02364 Glucan_synthase: 1,3- 100.0 8E-275 2E-279 2396.5 47.7 738 333-1108 1-805 (817)
3 PF02364 Glucan_synthase: 1,3- 98.1 6.7E-07 1.4E-11 110.3 1.6 44 431-474 99-142 (817)
4 KOG0916 1,3-beta-glucan syntha 95.6 0.043 9.4E-07 71.5 9.6 181 954-1172 1413-1598(1679)
5 PRK14583 hmsR N-glycosyltransf 80.8 1.5 3.2E-05 52.0 3.8 130 586-733 141-277 (444)
6 PRK11498 bcsA cellulose syntha 79.3 1.4 3E-05 57.0 3.2 189 586-792 325-522 (852)
7 PRK11204 N-glycosyltransferase 76.9 2.6 5.7E-05 49.0 4.2 137 586-734 120-257 (420)
8 PF11457 DUF3021: Protein of u 54.7 1.1E+02 0.0024 30.7 10.1 43 1136-1180 56-99 (136)
9 COG1215 Glycosyltransferases, 50.7 12 0.00025 43.4 2.8 165 533-732 81-260 (439)
10 PF15469 Sec5: Exocyst complex 43.9 87 0.0019 33.1 7.8 65 158-226 72-139 (182)
11 cd06421 CESA_CelA_like CESA_Ce 43.7 19 0.00041 37.4 2.9 138 586-734 70-208 (234)
12 cd02520 Glucosylceramide_synth 36.5 28 0.00062 36.0 2.8 102 586-734 72-174 (196)
13 PF14518 Haem_oxygenas_2: Iron 31.7 16 0.00036 34.9 0.2 75 584-678 9-89 (106)
14 TIGR03111 glyc2_xrt_Gpos1 puta 26.7 86 0.0019 37.6 5.0 41 587-631 118-159 (439)
15 PF07304 SRA1: Steroid recepto 26.5 4.3E+02 0.0093 28.2 9.4 59 190-256 44-105 (157)
16 PF10569 Thiol-ester_cl: Alpha 24.8 27 0.00058 28.1 0.2 11 753-763 9-19 (31)
17 PLN02436 cellulose synthase A 24.8 5.4E+02 0.012 35.2 11.7 227 709-968 792-1042(1094)
18 COG4176 ProW ABC-type proline/ 24.8 4.7E+02 0.01 30.8 9.8 67 1119-1185 61-138 (290)
19 PF05297 Herpes_LMP1: Herpesvi 22.6 28 0.00062 40.4 0.0 110 1053-1177 56-183 (381)
20 PF04156 IncA: IncA protein; 22.1 2.9E+02 0.0062 29.3 7.3 22 1091-1112 9-30 (191)
21 cd04195 GT2_AmsE_like GT2_AmsE 21.3 1.4E+02 0.003 30.5 4.6 131 576-729 60-193 (201)
22 COG1289 Predicted membrane pro 20.9 7.4E+02 0.016 31.8 11.7 31 1146-1176 469-499 (674)
No 1
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=0 Score=3383.00 Aligned_cols=1136 Identities=54% Similarity=0.855 Sum_probs=1073.9
Q ss_pred CCCeehhhccchhhHHHHhHhHHHHHHHHHHHHhhHHhhhhccCcccChHHHHHHhhhhHHHHHhhcCCCCCCCCCC---
Q 000946 18 LKNVVPICMFFLLMPQIYLLDIYIFYTLMSAAYGFLLGARDRLGEIRSVEAVHALFEEFPRAFMDTLHVPLPDRTSH--- 94 (1212)
Q Consensus 18 ~~N~~~v~~lW~PvvlvY~mD~QIWyai~s~~~G~~~G~~~~lGEIR~l~~lr~rF~~~p~aF~~~l~~~~p~~~~~--- 94 (1212)
.+|+++|+++|+|||+||+|||||||+|+|+++||++|+|+||||||+++ |+.+|+||+.++.+.-.+++..
T Consensus 525 ~~n~~~v~~~w~Pvv~Vy~mdtqiwy~i~s~lvggivg~f~~lgeir~~~-----f~~lp~af~~~l~~~~~~r~~~~~~ 599 (1679)
T KOG0916|consen 525 KNNIGVVIANWAPVVLVYFMDTQIWYAIFSTLVGGIVGFFFHLGEIRTLS-----FQPLPGAFNAYLKPKESKRKYLANK 599 (1679)
T ss_pred HHHHHHHHHHHhhHhheeehhhHHHHHHHHHHHHHHHHHHHHhheeEeee-----eeEchHhHhhhcCCCchhhhhhhhh
Confidence 46899999999999999999999999999999999999999999999999 9999999999994332112211
Q ss_pred CCCcccccccccccccchhhHHHHHhhccccccCchhhhhhhccC---CCCCCCCccccchhHhhcchHHHHHHHHHhcc
Q 000946 95 PSSGQAVEKKKFDAARFSPFWNEIIKNLREEDYITNLEMELLLMP---KNSGSLLLVQWPLFLLASKIFYAKDIAVENRD 171 (1212)
Q Consensus 95 ~~~~~~~~~~~~~~~rFa~~WNeiI~sfReeDlisdrE~~lL~~p---~~~~~~~~i~wP~FLla~ki~~Ald~a~~~~~ 171 (1212)
.++.+.+..+++++++|+++||+||.++||||+|+|||++++.+| .++++.. +||||+ ++|++|||+..+
T Consensus 600 ~ft~~~~~~~~~~a~~f~~lWn~vi~a~r~Edyis~~e~~l~i~~l~~~~~~~~~-----~flL~s--~la~~qaK~~~g 672 (1679)
T KOG0916|consen 600 TFTAKFAPLNGKEAARFALLWNTVILAKREEDYISLRELRLLIRPLSTMSSYDCT-----IFLLGS--PLALDQAKILLG 672 (1679)
T ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhhhHHhhhccchhhhhcccccCCcccch-----hHHhcc--HHHHHHHHHhcC
Confidence 122455667889999999999999999999999999999999999 4444443 999999 999999999998
Q ss_pred ChH-HHHHHhccChhHHHHHHHHHHHHHHHHHHhcccc--hhhHHHHHHHHHHHHHhcccccceeccCCchhHHHHHHHH
Q 000946 172 SQD-ELWERISRDEYMKYAVEEFYHTLKFILTETLEAE--GRMWVERIYDDINVSVEKRSIHVDFQLTKLPLVISRVTAL 248 (1212)
Q Consensus 172 ~~~-~l~~~i~~d~y~~~Av~e~y~s~k~il~~ll~~~--~~~~i~~i~~~i~~~i~~~~~~~~f~l~~Lp~l~~~~~~L 248 (1212)
++. +++++|++|+||.|||+|||+|+|+++..++..+ ++.++++++++|+.+|.+.++..+||++.||.++.+++.|
T Consensus 673 ~~~~~l~~~~~~DtYm~yaV~e~y~Sik~~~~~~i~~~T~~r~i~~ri~~rI~~~I~~~~~~~~fk~~vL~~~~~~~i~i 752 (1679)
T KOG0916|consen 673 KMYLTLLILFFLDTYLWYAVVETYFSIKKSFYLGISILTPWRNIFSRLPKRIYSKILATDLEIEFKPKVLPSQIWNAIKI 752 (1679)
T ss_pred chHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHhhHHHHhChhhhHHHHhhhhhe
Confidence 666 9999999999999999999999999999999874 8899999999999999999999999999999999999998
Q ss_pred HHHhhccCCchhhhhHHHHHHHHHHHHHHhhhccccccccchhhhhhhccccccccccccCCCChHHHHHHHHHHHhccc
Q 000946 249 MGVLKEAETPVLQKGAVQAVQDLYDVVRHDVLSINMRENYDTWNLLSKARTEGRLFSKLKWPKDAELKAQVKRLHSLLTI 328 (1212)
Q Consensus 249 ~~~L~~~~~~~~~~~~v~~lq~l~e~v~~d~~~~~~~~~l~~~~~~~~~~~~~~lf~~i~~p~~~~~~~~v~Rl~~lLt~ 328 (1212)
+ +.++ -++++|+++|++++|+++++.++.+ ...+.|.+++ +..+
T Consensus 753 ~---my~e-------~l~~lq~l~ell~~qv~~e~~~~~~----------~~~~ff~~~~---d~~~------------- 796 (1679)
T KOG0916|consen 753 S---MYRE-------HLLALQHLQELLYHQVPSEGGGQTL----------KAPTFFVSQD---DGSF------------- 796 (1679)
T ss_pred e---hhHH-------HHHHHHHHHHHHHHHhhhhcccchh----------hcchhheecc---cccc-------------
Confidence 8 2211 1999999999999999987644211 1223344443 2222
Q ss_pred cccccCCCCChhhhHhHhhhhccCCCCCCCCccccccccceeccccccceeccchhhhhhhCCCCccHHHHHHhhCchhh
Q 000946 329 KDSASNIPRNLEARRRLEFFTNSLFMDMPPAKPAREMLSFCVFTPYYSEIVLYSMDELLKKNEDGISILFYLQKIYPDEW 408 (1212)
Q Consensus 329 kdsa~~~P~n~EArRRisFFanSL~m~mP~a~~V~~M~sfSVlTPyY~E~Vl~S~~eL~~e~edgvsiL~YL~~i~PdEW 408 (1212)
|+++++|+|+||||||+||||||||+||+||||++|||||||||||+||||||++||++|||||||+|+||||||||||
T Consensus 797 -~s~~~~P~n~EA~RRisFFa~SL~m~mP~a~~V~~M~sFsVLtP~YsE~vl~S~~el~~e~ed~vsiL~YLqki~pdEW 875 (1679)
T KOG0916|consen 797 -ESAEFVPSNLEARRRISFFANSLFMPMPEAPPVRNMPSFSVLTPYYSEKVLYSLRELIRENEDGVSILFYLQKIYPDEW 875 (1679)
T ss_pred -cchhhCCccHHHHHHHHHHHHhhccCCCCCCcccccCceeeecccchhhhhhhHHHHhhcccCCeeHHHHHHHhCcHHH
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhhCCCCCCccccccCCchhhHhhhhhhhcccchhhhcccccccHHHHHHHHHHhhcCCCcchhhhhcccccCCcc
Q 000946 409 KNFLSRIGRDENSQDTELFDSPSDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLERMTSGDTEAALSSLDASDTQ 488 (1212)
Q Consensus 409 ~NFler~~~~~~~~~~~~~~~~~~~~elRlWAS~RgQTL~RTVrGmM~Y~~ALkll~~lE~~~~~~~~~~~~~~~~~~~~ 488 (1212)
+||+||+|+.+++.+.++...|++++|||+|||||||||||||||||||+|||||||++|+|++.++.+|++..+
T Consensus 876 ~nFler~k~~~~e~~~dl~~~pe~~l~lR~WaS~RgQTL~RTvrGmMyY~rAlkL~~~~e~~~~~~~~~G~~~~~----- 950 (1679)
T KOG0916|consen 876 KNFLERTKCLAEEKIDDLPFYPEYTLRLRIWASYRGQTLYRTVRGMMYYSRALKLLYFLENPEEVDLFEGDSNED----- 950 (1679)
T ss_pred HHHHHHhccchhccccccccchhHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhhcchhhHHhcCCchhh-----
Confidence 999999999887766677778999999999999999999999999999999999999999999999999843211
Q ss_pred hhhhHHHHHHHHhccccEEEEeeccCCCCcCCccchHhHHHHHHhCcCcEEEEecccccccCCcccceEEEEEeecC---
Q 000946 489 GFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFIDDVETLKDGKVHREFYSKLVKGD--- 565 (1212)
Q Consensus 489 ~~~~~~~~~~~a~~KF~yVVscQ~Yg~~k~~~~~~a~dI~~Lm~~~P~LrVAYide~~~~~~g~~~~~yySvLvk~~--- 565 (1212)
..+++++++||++|||||||||+||.||.++|++|+||++||++||+||||||||++++.+++ +++|||+|||++
T Consensus 951 -~~l~~~l~~~A~~KFtyvVscQ~Y~~~K~~~d~~ae~i~~Lm~~yp~LriAYide~e~~~~~~-~~~~YS~Lvk~~~~~ 1028 (1679)
T KOG0916|consen 951 -RSLEAELEAMADRKFTYVVSCQRYGNQKFSGDERAENILFLMRAYPSLRIAYIDEVEPPVEEG-EPVYYSVLVKGDCEI 1028 (1679)
T ss_pred -hHHHHHHHHHHhccceEEEehhHhhhhccCCChHHHHHHHHHHhCccceEeeeccccccccCC-CceEEEEeeecCcch
Confidence 248999999999999999999999999999999999999999999999999999988766554 679999999985
Q ss_pred -CCCccceeEEeecCCCCCCCCCCccCccchhhhccccccccccCCccchHHHHHhhhhhHHHHhhcC-CCCCceeeccc
Q 000946 566 -INGKDKEIYSIKLPGNPKLGEGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFHADH-GIRPPTILGVR 643 (1212)
Q Consensus 566 -~~g~~~eiYRIkLPG~piLGEGKpeNQNHAiIFtRGE~lQtIDmNQDnYlEEaLKmRNlL~EF~~~~-g~~p~tIlG~R 643 (1212)
+||+|+||||||||||||||||||||||||||||||||||||||||||||||||||||||+||++.+ |.|||||||+|
T Consensus 1029 ~~~~~~~~iyrIkLpG~pilGeGKpeNQNhaiiFtRGE~iQtIDmNQDnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~R 1108 (1679)
T KOG0916|consen 1029 DENGLDQEIYRIKLPGPPILGEGKPENQNHAIIFTRGEAIQTIDMNQDNYLEEALKMRNLLQEFEELHLGIRPPTILGAR 1108 (1679)
T ss_pred hhcccccceEEEeCCCCCcCCCCCCcccCceeeeecchhhheecccchHHHHHHHHHHHHHHHHHhhcCCCCCCceeeeh
Confidence 4689999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred ceeecccchhhccccccchhhHHHhhhHhhcccccccccccCCcccccccccccCcccccccccccchhhhhhhhhhccC
Q 000946 644 EHVFTGSVSSLAYFMSNQETSFVTLGQRVLANPLKCRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQ 723 (1212)
Q Consensus 644 EhIFTgsvssLa~f~a~qE~sFvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLSEDIFaG~N~~lRg 723 (1212)
||||||||||||||||||||||||||||+||+|+||||||||||||||+||+||||||||||||||||||||||||||||
T Consensus 1109 E~IFt~svssLa~fms~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~drif~~TRGGvSKAsk~inlsEDIfAG~n~tlRg 1188 (1679)
T KOG0916|consen 1109 EHIFTGSVSSLAWFMSGQEQSFVTLGQRTLANPGGVRLHYGHPDVFDRIFHITRGGVSKASKGINLSEDIFAGFNATLRG 1188 (1679)
T ss_pred hheecCCchHHHHHHccCccchhhHHHHHhccccceeeecCCCcHhhhhhhhccccchHhhcccccchHhhhhhhHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeeEEeccccccCcccccceeeeccCCcccccchhhhHhcccccchhhhhhhhccccchhhhHHHHHHHHHHHHH
Q 000946 724 GNVTHHEYIQVGKGRDVGLNQIAVFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLY 803 (1212)
Q Consensus 724 G~I~h~EYiQcGKGRDvG~~qI~~FeaKIa~GnGEQ~LSRdvyrLG~~ldffRmLSfYyt~~GFy~n~~~~vltVy~fly 803 (1212)
||||||||||||||||||||||+|||||||+|||||+||||||||||||||||||||||||||||+|||+||+|||+|||
T Consensus 1189 G~itH~EYiQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrLG~~ldffRmLSfyftt~GF~~n~m~ivltVy~Fl~ 1268 (1679)
T KOG0916|consen 1189 GNITHHEYIQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRLGTQLDFFRMLSFYFTTVGFYFNNMFIVLTVYLFLY 1268 (1679)
T ss_pred CCcccceeeecccccccCcchhhhhhhhhcCCCcchhhhHHHHHhcccccHHHHHHHHhccccHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcceeeccccccCCchhhhhccchhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccceeEEEec
Q 000946 804 GKTYLALSGVGEELQVRAQVTENTALTAALNTQFLFQIGIFTAVPMVLGFILEQGFLAAVVNFITMQLQLCSVFFTFSLG 883 (1212)
Q Consensus 804 ~~lyLalsg~~~~~~~~~~~~~~~~l~~~l~~q~~~qlg~l~~lPm~~~~~lE~G~~~A~~~~~~~~l~l~~vFf~F~~g 883 (1212)
|++|+++||+|+.+...+...+|++|++||+||+++|+|+++++||+|++++|||+++|+.||+.||+||||+||||+||
T Consensus 1269 GrlYl~lsg~~~~~~~~~~~~~~~~l~~aL~~qsifqv~~~~~lPmv~e~~lErGf~~A~~~f~~mqlqLa~vF~tF~~g 1348 (1679)
T KOG0916|consen 1269 GRLYLVLSGYEKDISLTASPRGCYALEPALAWQSIFQVGFIMFLPMVMEIGLERGFLRALSRFIKMQLQLAPVFFTFSLG 1348 (1679)
T ss_pred HhHHHHHhhhhhccccccCCCccchHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHheeeecc
Confidence 99999999999999877778999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecccccccCeeeeccCCceeEeecchhhhhhhhhhhhHHHHHHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHH
Q 000946 884 TRTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLIVYIAYGYNEGGTLGYILLSISSWFMA 963 (1212)
Q Consensus 884 t~~h~~~~~il~GGAkY~aTGRGFvi~h~~F~~lY~~Ya~Shf~~g~el~llLi~y~~yg~~~~s~~~y~~~t~s~W~~~ 963 (1212)
||+|||+|||+|||||||||||||||+|++|++|||+|||||||||+|+++||+||.+||+.++++..|+++|+|+||++
T Consensus 1349 t~~hy~~rtllhGGAkYr~TGRGFvv~h~~FsenYrlysrshfvkg~el~lmLlvy~~fg~~~~~~~~y~~~~i~~Wf~v 1428 (1679)
T KOG0916|consen 1349 TYTHYFGRTLLHGGAKYRATGRGFVVFHAKFSENYRLYSRSHFVKGSELMLLLLVYQIFGPAYRSSTVYILITISFWFLV 1428 (1679)
T ss_pred chhHhhhhHhhcCCeeeeccCcceEEEeccHHHHHHHhhhhHHHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccCCCCcccchhhhhHHHHhhhhccCCCCCCCCCcchhhchHhhhhhhcc--cccchhhhhhhhhhhhheec
Q 000946 964 LSWLFAPYLFNPSGFEWQKVVEDFRDWTNWLFYRGGIGVKGEESWEAWWDEELSHIRT--FSGRIAETILSLRFFIFQYG 1041 (1212)
Q Consensus 964 ~s~l~aPF~FNP~gF~w~k~~~D~~~w~~Wl~~~gg~~~~~~~SW~~Ww~~e~~~~r~--~rgr~~eiil~lRff~~qyg 1041 (1212)
.|||+|||+||||||+|+|+|+||+||++|+++|||++.++++||++||++|++|+++ .+|+++||++++|||+||||
T Consensus 1429 ~swlfAPFlFNPsgF~W~~~v~D~~d~~rWl~~rG~~~~~~~~SW~~ww~~e~~hl~~~~~~G~~~Ei~l~l~f~~f~~~ 1508 (1679)
T KOG0916|consen 1429 GSWLFAPFLFNPSGFEWQKFVDDYRDWIRWLWSRGGIGVHAEKSWESWWEEEQEHLTGSGRRGRFLEIILPLRFFFFQYG 1508 (1679)
T ss_pred HHHHhcccccCcccccHHHHHhhHHHHHHHHHhcCCCCCCccccHHHHHHHHHHHHhccCccchhHHHHHHHHHHHhhhe
Confidence 9999999999999999999999999999999889999999999999999999999998 57999999999999999999
Q ss_pred eeEEEeecC-CCCceeeehhHHHHHHHHHHHhhhhhcccc-ccccchhHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhH
Q 000946 1042 IVYKLNIQG-SDTSLTVYGLSWVVFAVLILLFKVFTFSQK-ISVNFQLLLRFIQGLSLLVALAGLSVAVAITKLSIPDVF 1119 (1212)
Q Consensus 1042 ivy~l~i~~-~~~s~~v~~lsw~v~~~~~~i~~~~~~~~~-~~~~~~~~~Rl~~~~~~~~~v~~~~~~~~~~~l~~~d~f 1119 (1212)
+||++++.. .++++.||++||+++++++++++++.+++| +++++|+++|+++++++++++.+++++..++++++.|+|
T Consensus 1509 ~~~~ln~~~g~~~~~~v~~~s~~~i~~v~~~~~~~~~~~kk~g~~~~~~~r~i~~~~~~~~~~v~~~l~~~~~~~~~d~~ 1588 (1679)
T KOG0916|consen 1509 IVYFLNIQPGTNTSLRVYILSWAPIAAVLFLFKLLGMCRKKFGAVFALLARFIKVLVFLLFFEVMWVLEGWSFLTTVDLF 1588 (1679)
T ss_pred eeEEEeccCCCCceEeehhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 999999998 699999999999999999999999999876 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhHHHHHHHHHHhhcccchhhhHhhhhhhhhhccchhh
Q 000946 1120 ACILAFVPTGWGILCIASAWKPLMKKLGLWKSVRSIARLYDAGMGMLIFIPIAMFSWFPFISTFQTRLMFNQAFSRGLEI 1199 (1212)
Q Consensus 1120 ~~~lA~i~~g~~il~ia~~~~~~~~~~~~W~~vr~lar~yd~~~G~ii~~pia~lsw~pf~~~~QTRllfN~aFSrgl~i 1199 (1212)
+|++|++||||+++++++++||+++.++.|++++.+||+||++||+++|+|+|+|+||||+++|||||||||||||||||
T Consensus 1589 ~~~la~~~t~~~~l~i~~~~r~~~~~~~~W~~~~~~~~ayd~~mg~li~~p~a~l~w~Pfi~~fqtr~LFn~afSR~l~i 1668 (1679)
T KOG0916|consen 1589 VSILAFHPTGWGLLLIAQLTREVKKDLGWWSGVWYLARAYDFFMGHLIFFPVAPLSWFPFISEFQTRMLFNQAFSRGLRI 1668 (1679)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCC
Q 000946 1200 SLILAGNNPN 1209 (1212)
Q Consensus 1200 s~ilag~~~~ 1209 (1212)
|+||+|++++
T Consensus 1669 ~~Il~gk~~~ 1678 (1679)
T KOG0916|consen 1669 SRILAGKQKK 1678 (1679)
T ss_pred chhhccCccC
Confidence 9999999986
No 2
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=100.00 E-value=7.7e-275 Score=2396.53 Aligned_cols=738 Identities=52% Similarity=0.841 Sum_probs=666.8
Q ss_pred cCCCCChhhhHhHhhhhccCCCCCCCCccccccccceeccccccceeccchhhhhhhCC--CCccHHHHHHhhCchhhhh
Q 000946 333 SNIPRNLEARRRLEFFTNSLFMDMPPAKPAREMLSFCVFTPYYSEIVLYSMDELLKKNE--DGISILFYLQKIYPDEWKN 410 (1212)
Q Consensus 333 ~~~P~n~EArRRisFFanSL~m~mP~a~~V~~M~sfSVlTPyY~E~Vl~S~~eL~~e~e--dgvsiL~YL~~i~PdEW~N 410 (1212)
+++|+|+||||||+||||||+||||+||||++|||||||||||+|||+||++||++||| ||||+|+|||+||||||+|
T Consensus 1 ~~~P~~~EA~RRisFFanSL~~~mP~~~~V~~M~sfsVLtP~Y~E~Vl~Sl~eL~ke~e~~~~vtlL~YLk~l~p~EW~n 80 (817)
T PF02364_consen 1 EFFPRNSEARRRISFFANSLFMPMPEPPPVEKMPSFSVLTPYYSEKVLYSLKELIKENEQNDGVTLLEYLKQLYPDEWEN 80 (817)
T ss_pred CCCCCchHHHHHHHHHHHhcCCCCcCCCchhhccccccccccccceeccCHHHhhhcccccCCccHHHHHHHHChHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHhhhCCCCCCccc--------c-----------c--------cCCchhhHhhhhhhhcccchhhhcccccccHHHHHHH
Q 000946 411 FLSRIGRDENSQDT--------E-----------L--------FDSPSDILELRFWASYRAQTLARTVRGMMYYRKALML 463 (1212)
Q Consensus 411 Fler~~~~~~~~~~--------~-----------~--------~~~~~~~~elRlWAS~RgQTL~RTVrGmM~Y~~ALkl 463 (1212)
|+||+|+..++.+. + + ...|++++|+|+|||+|||||||||+|||||++|||+
T Consensus 81 F~er~k~~~~e~~~~~~~~~~~~~~~was~r~qtL~rtv~Gfm~~~~a~~LrtrLWASlR~QTLyRTV~G~m~y~~Alkl 160 (817)
T PF02364_consen 81 FVERTKRLAEESDAEESSEKEEELRLWASYRGQTLPRTVRGFMYYEPAYTLRTRLWASLRGQTLYRTVSGFMNYSKALKL 160 (817)
T ss_pred HHHHhcccchhhhhhccccchhhhhHHHHhcccCCCchhhhhhhhhHHHHHHhhhhhccHHHhhhhhhhhhhhHHHHHhh
Confidence 99999976533211 0 0 2357899999999999999999999999999999999
Q ss_pred HHHhhcCCCcchhhhhcccccCCcchhhhHHHHHHHHhccccEEEEeeccCCCCcCCccchHhHHHHHHhCcCcEEEEec
Q 000946 464 QAYLERMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFID 543 (1212)
Q Consensus 464 l~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~KF~yVVscQ~Yg~~k~~~~~~a~dI~~Lm~~~P~LrVAYid 543 (1212)
|+++|+++..+..+++ . +.++++++++|++||+||||||+||+|| +++|+||+.||++||+|||||||
T Consensus 161 l~~~e~~~~~~~~~~~-------~--~~~~~~~~~~a~~KF~yVVs~Q~yg~~~---~~~a~~i~~Lm~~~P~LrVAYid 228 (817)
T PF02364_consen 161 LYRVENPSIEQMFGGN-------Y--ESLERELEAMADRKFTYVVSCQRYGKFK---KEEAEDIEFLMRAYPSLRVAYID 228 (817)
T ss_pred HhhccCCchhhhccCc-------h--HHHHHHHHHHHhcCCCEEEecchhcCCC---hHHHHHHHHHHHhCCceEEEEEe
Confidence 9999999987665542 1 4677899999999999999999999999 77899999999999999999999
Q ss_pred ccccccCCcccceEEEEEeecC----CCCccceeEEeecCCCCCCCCCCccCccchhhhccccccccccCCccchHHHHH
Q 000946 544 DVETLKDGKVHREFYSKLVKGD----INGKDKEIYSIKLPGNPKLGEGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEAL 619 (1212)
Q Consensus 544 e~~~~~~g~~~~~yySvLvk~~----~~g~~~eiYRIkLPG~piLGEGKpeNQNHAiIFtRGE~lQtIDmNQDnYlEEaL 619 (1212)
|+++.++|+ +++|||||||++ ++|+++|+||||||||||||||||||||||||||||||+|||||||||||||||
T Consensus 229 e~~~~~~~~-~~~yYS~Lv~~~~~~~~~g~~~~~yri~LpG~pilGeGK~eNQNhaiiF~rGe~lQ~IDmNQDnYleE~l 307 (817)
T PF02364_consen 229 EVPDRNGGG-EPEYYSVLVKGDCEIDENGKRQEIYRIKLPGNPILGEGKPENQNHAIIFTRGEYLQTIDMNQDNYLEEAL 307 (817)
T ss_pred eecccCCCC-CceEEEEEecCCccccccCcccceEEEECCCCCcCCCCCccccceeEEEEccccccccccchhhhHHHHH
Confidence 998655544 799999999985 479999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHhhcCC--------------CCCceeecccceeecccchhhccccccchhhHHHhhhHhhcccccccccccC
Q 000946 620 KMRNLLEEFHADHG--------------IRPPTILGVREHVFTGSVSSLAYFMSNQETSFVTLGQRVLANPLKCRMHYGH 685 (1212)
Q Consensus 620 KmRNlL~EF~~~~g--------------~~p~tIlG~REhIFTgsvssLa~f~a~qE~sFvTl~qR~LA~Pl~vR~HYGH 685 (1212)
||||||+||++.++ .+||||||+|||||||||||||||||+||||||||+||+||+|+ |||||||
T Consensus 308 K~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~-~rlHYGH 386 (817)
T PF02364_consen 308 KMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLANPL-VRLHYGH 386 (817)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHhcch-hhccCCC
Confidence 99999999998765 68999999999999999999999999999999999999999999 9999999
Q ss_pred CcccccccccccCcccccccccccchhhhhhhhhhccCceeeeeeeEEeccccccCcccccceeeeccCCcccccchhhh
Q 000946 686 PDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIAVFEGKVAGGNGEQVLSRDV 765 (1212)
Q Consensus 686 PDvfd~~F~~TRGGvSKAsk~inLSEDIFaG~N~~lRgG~I~h~EYiQcGKGRDvG~~qI~~FeaKIa~GnGEQ~LSRdv 765 (1212)
||||||+||+||||||||||||||||||||||||+|||||||||||||||||||||||||++||||||+|||||+||||+
T Consensus 387 PD~~n~~f~~TRGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~ey~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~ 466 (817)
T PF02364_consen 387 PDVFNRIFMTTRGGVSKASKGLHLSEDIFAGMNATLRGGRIKHCEYIQCGKGRDVGFNSILNFETKIASGMGEQMLSREY 466 (817)
T ss_pred chhhhhhheeccCccchHhhcccccHHHHHHHHHHhcCCceeehhhhhcccccccCchhhhhhHhHhcCCccchhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhcCCccee--ecccc------ccCCchhhhhcc---
Q 000946 766 YRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGEEL--QVRAQ------VTENTALTAALN--- 834 (1212)
Q Consensus 766 yrLG~~ldffRmLSfYyt~~GFy~n~~~~vltVy~fly~~lyLalsg~~~~~--~~~~~------~~~~~~l~~~l~--- 834 (1212)
|||||||||||||||||||||||+|||+||+|||+|+|+. +++++++..+ +.... ..+|.+|+++++
T Consensus 467 yrLg~~ld~~R~LSfyy~~~Gf~~n~~~i~lsv~~f~~~~--~~L~~l~~~~~~~~~~~~~~~~~~~g~~~l~p~~~~~~ 544 (817)
T PF02364_consen 467 YRLGTRLDFFRFLSFYYAHPGFYINNMFIVLSVYLFLYVY--LNLSGLEHESIICAYDKNTDVLEPIGCYNLQPVLDWIA 544 (817)
T ss_pred HHhhccCCHHHHHHHHhcCccHhHhhHHHHHHHHHHHHHH--HHHHHHHHHHHhhhhhcCCCccCCcccccccHHHHHHH
Confidence 9999999999999999999999999999999999999954 4555544433 32221 257999999764
Q ss_pred --chhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccceeEEEeceeeeeecccccccCeeeeccCCceeEeec
Q 000946 835 --TQFLFQIGIFTAVPMVLGFILEQGFLAAVVNFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHI 912 (1212)
Q Consensus 835 --~q~~~qlg~l~~lPm~~~~~lE~G~~~A~~~~~~~~l~l~~vFf~F~~gt~~h~~~~~il~GGAkY~aTGRGFvi~h~ 912 (1212)
+|+++|+|+++++||++|+++|+|+++|+.+|+.||+|+||+||||+||||+|||++||+|||||||||||||||+|+
T Consensus 545 ~~~~si~q~g~l~~lPl~~q~~lE~G~~~A~~~~~~~~lslsp~F~vF~~qt~a~~~~~~l~~GGAkYiaTGRGF~i~r~ 624 (817)
T PF02364_consen 545 RNVQSIFQLGFLSFLPLIVQELLERGFWKALTRFFKHQLSLSPVFEVFSCQTYAHYFGRTLLHGGAKYIATGRGFVITRI 624 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcccchheeeeeehhhhhhhhhhhcCccEEEecCCceEEEec
Confidence 599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhhhhHHHHHHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHHHHHhhcccccCCCCcccchhhhhHHHHhh
Q 000946 913 KFSENYRLYSRSHFVKGLEVVLLLIVYIAYGYNEGGTLGYILLSISSWFMALSWLFAPYLFNPSGFEWQKVVEDFRDWTN 992 (1212)
Q Consensus 913 ~F~~lY~~Ya~Shf~~g~el~llLi~y~~yg~~~~s~~~y~~~t~s~W~~~~s~l~aPF~FNP~gF~w~k~~~D~~~w~~ 992 (1212)
+|++||++|||||||+|+|+++||++|.++ +|++.|||+|++++|||+||||||||||+|+|+++||+||++
T Consensus 625 ~F~~lY~~YA~Sh~y~G~el~llLl~~~~~--------~y~~~~~~~W~~v~sll~aPFiFNP~~F~w~~~~~Dy~dw~~ 696 (817)
T PF02364_consen 625 PFAELYSRYARSHFYKGFELLLLLLFYTLT--------MYIPATLSFWFLVISLLFAPFIFNPHQFDWQKFFVDYRDWLR 696 (817)
T ss_pred cHHHHHHHHhHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhcCcccCchhHHHHhHHHHHH
Confidence 999999999999999999999999887654 899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCcchhhchHhhhhhhcccccchhhhhhhhhhhhheeceeEEEeecCCCCceeeehhHHHHHHHH----
Q 000946 993 WLFYRGGIGVKGEESWEAWWDEELSHIRTFSGRIAETILSLRFFIFQYGIVYKLNIQGSDTSLTVYGLSWVVFAVL---- 1068 (1212)
Q Consensus 993 Wl~~~gg~~~~~~~SW~~Ww~~e~~~~r~~rgr~~eiil~lRff~~qygivy~l~i~~~~~s~~v~~lsw~v~~~~---- 1068 (1212)
||++ |+++++++||++||++|++|+...++|++|++.+.+..-. ..++.....++.+++..+
T Consensus 697 Wl~~--g~~~~~~~SW~~w~~~~~~~~tg~k~k~~~~~~e~~~~~~------------~r~~~~~~~~~ei~~~l~~~~~ 762 (817)
T PF02364_consen 697 WLSR--GNSRPHDNSWISWWREERSRITGFKRKILEDISEKRFGDH------------LRASFFNLLFSEIILPLRFFIF 762 (817)
T ss_pred HHhc--CCCCccccccHHHHHHHHHHhccccceeeccchhcccccc------------ccceeeehhHHHHHHHHHHHHH
Confidence 9983 8899999999999999999999999999998877653211 123333334444444322
Q ss_pred HHHhhhhhcccccc---ccchhHHHHHHHHHHHHHHHHHHHHh
Q 000946 1069 ILLFKVFTFSQKIS---VNFQLLLRFIQGLSLLVALAGLSVAV 1108 (1212)
Q Consensus 1069 ~~i~~~~~~~~~~~---~~~~~~~Rl~~~~~~~~~v~~~~~~~ 1108 (1212)
.++.+.+..+++.. ...+.++|+++.+++|+++.+++++.
T Consensus 763 ~~~~y~finsq~~~~~~~~~n~l~Rl~i~~~~pI~~n~~vl~~ 805 (817)
T PF02364_consen 763 QFIAYLFINSQNGVKSSQPVNSLLRLLIVTLIPIAVNAVVLLV 805 (817)
T ss_pred HHhhheEEEcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 23333444566543 46789999999999888777555443
No 3
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=98.15 E-value=6.7e-07 Score=110.31 Aligned_cols=44 Identities=52% Similarity=0.786 Sum_probs=40.1
Q ss_pred hhhHhhhhhhhcccchhhhcccccccHHHHHHHHHHhhcCCCcc
Q 000946 431 SDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLERMTSGD 474 (1212)
Q Consensus 431 ~~~~elRlWAS~RgQTL~RTVrGmM~Y~~ALkll~~lE~~~~~~ 474 (1212)
+...++|.|||||||||.|||+|||||++|++|+++++.....+
T Consensus 99 ~~~~~~~~was~r~qtL~rtv~Gfm~~~~a~~LrtrLWASlR~Q 142 (817)
T PF02364_consen 99 EKEEELRLWASYRGQTLPRTVRGFMYYEPAYTLRTRLWASLRGQ 142 (817)
T ss_pred cchhhhhHHHHhcccCCCchhhhhhhhhHHHHHHhhhhhccHHH
Confidence 35678999999999999999999999999999999999987654
No 4
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=95.58 E-value=0.043 Score=71.55 Aligned_cols=181 Identities=15% Similarity=0.177 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHh-hcccccCCCCcccchhh--hhHHHHhhhhccCCCCCCCCCcchhhchHhhhhhhcccccchhhhh
Q 000946 954 LLSISSWFMALSWL-FAPYLFNPSGFEWQKVV--EDFRDWTNWLFYRGGIGVKGEESWEAWWDEELSHIRTFSGRIAETI 1030 (1212)
Q Consensus 954 ~~t~s~W~~~~s~l-~aPF~FNP~gF~w~k~~--~D~~~w~~Wl~~~gg~~~~~~~SW~~Ww~~e~~~~r~~rgr~~eii 1030 (1212)
.++.|.-.++..|. ..-++|-|.-|.-..+- +=+.||..|+.==+..|....+.=.|| ....+..+.+++
T Consensus 1413 ~~~~y~~~~i~~Wf~v~swlfAPFlFNPsgF~W~~~v~D~~d~~rWl~~rG~~~~~~~~SW----~~ww~~e~~hl~--- 1485 (1679)
T KOG0916|consen 1413 SSTVYILITISFWFLVGSWLFAPFLFNPSGFEWQKFVDDYRDWIRWLWSRGGIGVHAEKSW----ESWWEEEQEHLT--- 1485 (1679)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHhhHHHHHHHHHhcCCCCCCccccH----HHHHHHHHHHHh---
Confidence 33334444444554 45799999999998653 456789999852223333333333366 555666666666
Q ss_pred hhhhhhhheeceeEEEeecCCCCceeeehhHHHHHHHHHHHhhhhhcccccccc-chhHHHHHHHHHHHHHHHHHHHHhh
Q 000946 1031 LSLRFFIFQYGIVYKLNIQGSDTSLTVYGLSWVVFAVLILLFKVFTFSQKISVN-FQLLLRFIQGLSLLVALAGLSVAVA 1109 (1212)
Q Consensus 1031 l~lRff~~qygivy~l~i~~~~~s~~v~~lsw~v~~~~~~i~~~~~~~~~~~~~-~~~~~Rl~~~~~~~~~v~~~~~~~~ 1109 (1212)
+|+.+ |. +..+++...++++..-.+..-...+ .+..+|+.....++++++.+++
T Consensus 1486 ------------~~~~~--G~--------~~Ei~l~l~f~~f~~~~~~~ln~~~g~~~~~~v~~~s~~~i~~v~~~~--- 1540 (1679)
T KOG0916|consen 1486 ------------GSGRR--GR--------FLEIILPLRFFFFQYGIVYFLNIQPGTNTSLRVYILSWAPIAAVLFLF--- 1540 (1679)
T ss_pred ------------ccCcc--ch--------hHHHHHHHHHHHhhheeeEEEeccCCCCceEeehhhHHHHHHHHHHHH---
Confidence 33222 11 4556666555544332222212222 4556677777766655532221
Q ss_pred hcCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhHHHHHHHHH
Q 000946 1110 ITKLSI-PDVFACILAFVPTGWGILCIASAWKPLMKKLGLWKSVRSIARLYDAGMGMLIFIPIA 1172 (1212)
Q Consensus 1110 ~~~l~~-~d~f~~~lA~i~~g~~il~ia~~~~~~~~~~~~W~~vr~lar~yd~~~G~ii~~pia 1172 (1212)
.-++. ++.+++.+|.++|+..++.++..+ .+++.+..|...+.+ |.+..++.|.|..
T Consensus 1541 -~~~~~~~kk~g~~~~~~~r~i~~~~~~~~~-~v~~~l~~~~~~~~~----d~~~~~la~~~t~ 1598 (1679)
T KOG0916|consen 1541 -KLLGMCRKKFGAVFALLARFIKVLVFLLFF-EVMWVLEGWSFLTTV----DLFVSILAFHPTG 1598 (1679)
T ss_pred -HHHHHHHhhhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccHH----HHHHHHHHHhhHH
Confidence 12333 778999999999999999988887 999999999999887 7788888887764
No 5
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=80.76 E-value=1.5 Score=52.03 Aligned_cols=130 Identities=18% Similarity=0.148 Sum_probs=69.4
Q ss_pred CCCccCccchhhhccccccccccCCccchHHHHHhhhhhHHHHhhcCCCCCceeecccceeecccchhhccccccchhhH
Q 000946 586 EGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVSSLAYFMSNQETSF 665 (1212)
Q Consensus 586 EGKpeNQNHAiIFtRGE~lQtIDmNQDnYlEEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvssLa~f~a~qE~sF 665 (1212)
.||+.+.|+|+..++||++-++|+. +.++.- -++.+.+.|+++. .+.+++.+-.+...+ +.++....++-.++
T Consensus 141 ~Gka~AlN~gl~~a~~d~iv~lDAD--~~~~~d-~L~~lv~~~~~~~---~~g~v~g~~~~~~~~-~~~~~~~~~e~~~~ 213 (444)
T PRK14583 141 QGKAIALRMGAAAARSEYLVCIDGD--ALLDKN-AVPYLVAPLIANP---RTGAVTGNPRIRTRS-TLIGRVQVGEFSSI 213 (444)
T ss_pred CCHHHHHHHHHHhCCCCEEEEECCC--CCcCHH-HHHHHHHHHHhCC---CeEEEEccceecCCC-cchhhHHHHHHHHH
Confidence 4799999999999999999998874 444322 2335555665432 233443322222221 22222222222222
Q ss_pred HHhhhHhhcccccccccccCCc-------ccccccccccCcccccccccccchhhhhhhhhhccCceeeeeeeEE
Q 000946 666 VTLGQRVLANPLKCRMHYGHPD-------VFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYIQ 733 (1212)
Q Consensus 666 vTl~qR~LA~Pl~vR~HYGHPD-------vfd~~F~~TRGGvSKAsk~inLSEDIFaG~N~~lRgG~I~h~EYiQ 733 (1212)
..+.+|... .||.+- .|.|.-...=||-+- -.+.||+--|+-...+|.+|.+++-..
T Consensus 214 ~~~~~~~~~-------~~g~~~~~sG~~~~~rr~al~~vGg~~~----~~i~ED~dl~~rl~~~G~~i~~~p~a~ 277 (444)
T PRK14583 214 IGLIKRTQR-------VYGQVFTVSGVVAAFRRRALADVGYWSP----DMITEDIDISWKLQLKHWSVFFEPRGL 277 (444)
T ss_pred HHHHHHHHH-------HhCCceEecCceeEEEHHHHHHcCCCCC----CcccccHHHHHHHHHcCCeEEEeeccE
Confidence 222333222 133322 122222222244431 147899999999999999998887543
No 6
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=79.30 E-value=1.4 Score=56.98 Aligned_cols=189 Identities=15% Similarity=0.171 Sum_probs=111.6
Q ss_pred CCCccCccchhhhccccccccccCCccchHHHHHhhhhhHHHHhhcCCCCCceeecccceeeccc-----chhhcccccc
Q 000946 586 EGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFHADHGIRPPTILGVREHVFTGS-----VSSLAYFMSN 660 (1212)
Q Consensus 586 EGKpeNQNHAiIFtRGE~lQtIDmNQDnYlEEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgs-----vssLa~f~a~ 660 (1212)
.||..|-|||+=.++||++=+.|++. ..+.-. .++++..|.++ +.+.+|+.+=+.++.. .+....+..-
T Consensus 325 ~gKAGnLN~aL~~a~GEyIavlDAD~--ip~pdf-L~~~V~~f~~d---P~VglVQtp~~f~n~dp~~rnl~~~~~~~~e 398 (852)
T PRK11498 325 HAKAGNINNALKYAKGEFVAIFDCDH--VPTRSF-LQMTMGWFLKD---KKLAMMQTPHHFFSPDPFERNLGRFRKTPNE 398 (852)
T ss_pred cchHHHHHHHHHhCCCCEEEEECCCC--CCChHH-HHHHHHHHHhC---CCeEEEEcceeccCCchHHHhhHHHhhcccc
Confidence 37999999999999999999999953 332111 22444455544 3578888776655432 1211122222
Q ss_pred chhhHHHhhhHhhcccccccccccCCcccccccccccCcccccccccccchhhhhhhhhhccCceeeeee-eEEeccccc
Q 000946 661 QETSFVTLGQRVLANPLKCRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHE-YIQVGKGRD 739 (1212)
Q Consensus 661 qE~sFvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLSEDIFaG~N~~lRgG~I~h~E-YiQcGKGRD 739 (1212)
+| .|-...|+-... ....+--|+-=++.|.-...=||..-- -++||.--++....+|-++.+.. =...|-
T Consensus 399 ~~-~fy~~iq~g~~~-~~a~~~~Gs~aviRReaLeeVGGfd~~----titED~dlslRL~~~Gyrv~yl~~~~a~gl--- 469 (852)
T PRK11498 399 GT-LFYGLVQDGNDM-WDATFFCGSCAVIRRKPLDEIGGIAVE----TVTEDAHTSLRLHRRGYTSAYMRIPQAAGL--- 469 (852)
T ss_pred hh-HHHHHHHhHHHh-hcccccccceeeeEHHHHHHhcCCCCC----ccCccHHHHHHHHHcCCEEEEEeccceeEE---
Confidence 22 343455543332 334445577667777777777888642 37999999999988998988764 333332
Q ss_pred cCccccccee---eeccCCcccccchhhhHhcccccchhhhhhhhccccchhhhHH
Q 000946 740 VGLNQIAVFE---GKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTM 792 (1212)
Q Consensus 740 vG~~qI~~Fe---aKIa~GnGEQ~LSRdvyrLG~~ldffRmLSfYyt~~GFy~n~~ 792 (1212)
.=.++..+- .+-+.| ..|.+.++---++..+.+..=+ +|....=++++.+
T Consensus 470 -aPesl~~~~~QR~RWarG-~lQi~r~~~pl~~~gL~~~qRl-~y~~~~l~~l~g~ 522 (852)
T PRK11498 470 -ATESLSAHIGQRIRWARG-MVQIFRLDNPLTGKGLKLAQRL-CYANAMLHFLSGI 522 (852)
T ss_pred -CCCCHHHHHHHHHHHHHH-HHHHHHHhChhccCCCCHHHHH-HHHHHHHHHHHHH
Confidence 223455442 345667 5777766544567777774333 2333333444443
No 7
>PRK11204 N-glycosyltransferase; Provisional
Probab=76.93 E-value=2.6 Score=48.98 Aligned_cols=137 Identities=17% Similarity=0.127 Sum_probs=72.7
Q ss_pred CCCccCccchhhhccccccccccCCccchH-HHHHhhhhhHHHHhhcCCCCCceeecccceeecccchhhccccccchhh
Q 000946 586 EGKPENQNHAVIFTRGNAIQTIDMNQDNYF-EEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVSSLAYFMSNQETS 664 (1212)
Q Consensus 586 EGKpeNQNHAiIFtRGE~lQtIDmNQDnYl-EEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvssLa~f~a~qE~s 664 (1212)
.||+.|-|+|+-.++||++=.+|.+ +.+ .++| +++++.|+++. .+.+++.+=.+-. ..+.++....++-.+
T Consensus 120 ~Gka~aln~g~~~a~~d~i~~lDaD--~~~~~d~L--~~l~~~~~~~~---~v~~v~g~~~~~~-~~~~~~~~~~~~~~~ 191 (420)
T PRK11204 120 QGKANALNTGAAAARSEYLVCIDGD--ALLDPDAA--AYMVEHFLHNP---RVGAVTGNPRIRN-RSTLLGRIQVGEFSS 191 (420)
T ss_pred CCHHHHHHHHHHHcCCCEEEEECCC--CCCChhHH--HHHHHHHHhCC---CeEEEECCceecc-chhHHHHHHHHHHHH
Confidence 4799999999999999999998765 444 2333 35666776542 3444443222222 122233322222222
Q ss_pred HHHhhhHhhcccccccccccCCcccccccccccCcccccccccccchhhhhhhhhhccCceeeeeeeEEe
Q 000946 665 FVTLGQRVLANPLKCRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYIQV 734 (1212)
Q Consensus 665 FvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLSEDIFaG~N~~lRgG~I~h~EYiQc 734 (1212)
...+.++.....-.+-..-|+==.+.|.....-||...- .++||.--++-...+|.++.++.-..|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~vgg~~~~----~~~ED~~l~~rl~~~G~~i~~~p~~~~ 257 (420)
T PRK11204 192 IIGLIKRAQRVYGRVFTVSGVITAFRKSALHEVGYWSTD----MITEDIDISWKLQLRGWDIRYEPRALC 257 (420)
T ss_pred hhhHHHHHHHHhCCceEecceeeeeeHHHHHHhCCCCCC----cccchHHHHHHHHHcCCeEEeccccEE
Confidence 221222211110000001122223333333344665432 368999999999999999988876555
No 8
>PF11457 DUF3021: Protein of unknown function (DUF3021); InterPro: IPR021560 This is a bacterial family of uncharacterised proteins.
Probab=54.71 E-value=1.1e+02 Score=30.66 Aligned_cols=43 Identities=19% Similarity=0.454 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHHHhhhHHHHHHHHHHhh-cccch
Q 000946 1136 ASAWKPLMKKLGLWKSVRSIARLYDAGMGMLIFIPIAMFS-WFPFI 1180 (1212)
Q Consensus 1136 a~~~~~~~~~~~~W~~vr~lar~yd~~~G~ii~~pia~ls-w~pf~ 1180 (1212)
+...-..+...+.|...+.. .-+++...+++.|++.+. |+|.-
T Consensus 56 ~~gl~s~if~~e~~s~~~~~--iiHf~~~~~~~~~~~~~~gW~~~~ 99 (136)
T PF11457_consen 56 VFGLASLIFEIERWSLLKQT--IIHFIITYAIFLILAYLLGWFPLS 99 (136)
T ss_pred HHHHHHHHHcccchhHHHHH--HHHHHHHHHHHHHHHHHhCCcchh
Confidence 33333344455778765554 567778888888888775 88874
No 9
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=50.72 E-value=12 Score=43.36 Aligned_cols=165 Identities=16% Similarity=0.097 Sum_probs=90.7
Q ss_pred hCcCcEEEEecccccccCCcccceEEEEEeecCCCCccceeEEeecCCCCCCCCCCccCccchhhhccccccccccCC--
Q 000946 533 RNEALRVAFIDDVETLKDGKVHREFYSKLVKGDINGKDKEIYSIKLPGNPKLGEGKPENQNHAVIFTRGNAIQTIDMN-- 610 (1212)
Q Consensus 533 ~~P~LrVAYide~~~~~~g~~~~~yySvLvk~~~~g~~~eiYRIkLPG~piLGEGKpeNQNHAiIFtRGE~lQtIDmN-- 610 (1212)
.||...|=++|+..+++.. ..+.+.. .+..+..++--| +.-..||+.++|.|+=..+||++=++|+.
T Consensus 81 dyp~~evivv~d~~~d~~~-------~~~~~~~--~~~~~~~~~~~~--~~~~~gK~~al~~~l~~~~~d~V~~~DaD~~ 149 (439)
T COG1215 81 DYPRYEVIVVDDGSTDETY-------EILEELG--AEYGPNFRVIYP--EKKNGGKAGALNNGLKRAKGDVVVILDADTV 149 (439)
T ss_pred CCCCceEEEECCCCChhHH-------HHHHHHH--hhcCcceEEEec--cccCccchHHHHHHHhhcCCCEEEEEcCCCC
Confidence 4788888888774321110 0111100 011134444433 56788999999999999999999999985
Q ss_pred -ccchHHHHHhhhhhHHHHhhcCCCCCceeecccceeeccc-chhhccccccchhhHHHhhhHhhcccccccccccCCcc
Q 000946 611 -QDNYFEEALKMRNLLEEFHADHGIRPPTILGVREHVFTGS-VSSLAYFMSNQETSFVTLGQRVLANPLKCRMHYGHPDV 688 (1212)
Q Consensus 611 -QDnYlEEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgs-vssLa~f~a~qE~sFvTl~qR~LA~Pl~vR~HYGHPDv 688 (1212)
-.+++.|+.+ .|+..... +++|.+.+..... .+.++..-+... ..-++.+.+-.
T Consensus 150 ~~~d~l~~~~~------~f~~~~~~---~v~~~~~~~~~~~~~~~l~~~~~~~~---------------~~~~~~~~~~~ 205 (439)
T COG1215 150 PEPDALRELVS------PFEDPPVG---AVVGTPRIRNRPDPSNLLGRIQAIEY---------------LSAFYFRLRAA 205 (439)
T ss_pred CChhHHHHHHh------hhcCCCee---EEeCCceeeecCChhhhcchhcchhh---------------hhhHHHhhhhh
Confidence 3556655544 56543211 4677665444221 111221111111 11122222222
Q ss_pred cccccccccCcccccccc-----------cccchhhhhhhhhhccCceeeeeeeE
Q 000946 689 FDRVFHITRGGISKASRV-----------INISEDIYAGFNTTLRQGNVTHHEYI 732 (1212)
Q Consensus 689 fd~~F~~TRGGvSKAsk~-----------inLSEDIFaG~N~~lRgG~I~h~EYi 732 (1212)
-+.-...+.+|.+.|=|. -.+.||.=-++-.-.+|.++.++.--
T Consensus 206 ~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~ 260 (439)
T COG1215 206 SKGGLISFLSGSSSAFRRSALEEVGGWLEDTITEDADLTLRLHLRGYRVVYVPEA 260 (439)
T ss_pred hhcCCeEEEcceeeeEEHHHHHHhCCCCCCceeccHHHHHHHHHCCCeEEEeecc
Confidence 222234455555555442 25779988888888999999988654
No 10
>PF15469 Sec5: Exocyst complex component Sec5
Probab=43.93 E-value=87 Score=33.11 Aligned_cols=65 Identities=17% Similarity=0.266 Sum_probs=48.0
Q ss_pred chHHHHHHHHHhc---cChHHHHHHhccChhHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHhc
Q 000946 158 KIFYAKDIAVENR---DSQDELWERISRDEYMKYAVEEFYHTLKFILTETLEAEGRMWVERIYDDINVSVEK 226 (1212)
Q Consensus 158 ki~~Ald~a~~~~---~~~~~l~~~i~~d~y~~~Av~e~y~s~k~il~~ll~~~~~~~i~~i~~~i~~~i~~ 226 (1212)
++..|+..-.+++ +-...|.+-|++.+| ..+..-|.-.|.++..... +..++..++.+||+.+++
T Consensus 72 ~l~~~l~~l~r~~flF~LP~~L~~~i~~~dy--~~~i~dY~kak~l~~~~~~--~~~vf~~v~~eve~ii~~ 139 (182)
T PF15469_consen 72 KLRNALEFLQRNRFLFNLPSNLRECIKKGDY--DQAINDYKKAKSLFEKYKQ--QVPVFQKVWSEVEKIIEE 139 (182)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHcCcH--HHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHH
Confidence 5666777777777 466788999999998 3456778888887766543 455678888888888753
No 11
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=43.75 E-value=19 Score=37.42 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=78.2
Q ss_pred CCCccCccchhhhccccccccccCCccchHHHHHhhhhhHHHHhhcCCCCCceeecccceeecccch-hhccccccchhh
Q 000946 586 EGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVS-SLAYFMSNQETS 664 (1212)
Q Consensus 586 EGKpeNQNHAiIFtRGE~lQtIDmNQDnYlEEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvs-sLa~f~a~qE~s 664 (1212)
-||.-|-|+|+=..+||++-++|. |.++++. .+.++++.++++ ..+.+++.+-+...++.. .+..-.......
T Consensus 70 ~~~~~~~n~~~~~a~~d~i~~lD~--D~~~~~~-~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (234)
T cd06421 70 HAKAGNLNNALAHTTGDFVAILDA--DHVPTPD-FLRRTLGYFLDD---PKVALVQTPQFFYNPDPFDWLADGAPNEQEL 143 (234)
T ss_pred CCcHHHHHHHHHhCCCCEEEEEcc--ccCcCcc-HHHHHHHHHhcC---CCeEEEecceEEecCCcchhHHHHHHHHHHH
Confidence 467888999999999999999886 7888653 666777777653 245666655443333221 122222222333
Q ss_pred HHHhhhHhhcccccccccccCCcccccccccccCcccccccccccchhhhhhhhhhccCceeeeeeeEEe
Q 000946 665 FVTLGQRVLANPLKCRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYIQV 734 (1212)
Q Consensus 665 FvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLSEDIFaG~N~~lRgG~I~h~EYiQc 734 (1212)
|.+..+.. .++.++-.=-|.-=.+.|..+..=||... ..+.||..-+.....+|.+|.+.....|
T Consensus 144 ~~~~~~~~-~~~~~~~~~~g~~~~~r~~~~~~ig~~~~----~~~~eD~~l~~r~~~~g~~i~~~~~~~~ 208 (234)
T cd06421 144 FYGVIQPG-RDRWGAAFCCGSGAVVRREALDEIGGFPT----DSVTEDLATSLRLHAKGWRSVYVPEPLA 208 (234)
T ss_pred HHHHHHHH-HhhcCCceecCceeeEeHHHHHHhCCCCc----cceeccHHHHHHHHHcCceEEEecCccc
Confidence 32221111 00011111113333344444444455542 2467999999999999999887665444
No 12
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=36.49 E-value=28 Score=36.01 Aligned_cols=102 Identities=16% Similarity=0.121 Sum_probs=64.9
Q ss_pred CCCccCccchhhhccccccccccCCccchH-HHHHhhhhhHHHHhhcCCCCCceeecccceeecccchhhccccccchhh
Q 000946 586 EGKPENQNHAVIFTRGNAIQTIDMNQDNYF-EEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVSSLAYFMSNQETS 664 (1212)
Q Consensus 586 EGKpeNQNHAiIFtRGE~lQtIDmNQDnYl-EEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvssLa~f~a~qE~s 664 (1212)
.||..|.|+++-..+||++=.+|.. ..+ ..+| +.+++.+. + +.+.++|-+
T Consensus 72 ~~~~~~~n~g~~~a~~d~i~~~D~D--~~~~~~~l--~~l~~~~~-~---~~~~~v~~~--------------------- 122 (196)
T cd02520 72 NPKVNNLIKGYEEARYDILVISDSD--ISVPPDYL--RRMVAPLM-D---PGVGLVTCL--------------------- 122 (196)
T ss_pred CHhHHHHHHHHHhCCCCEEEEECCC--ceEChhHH--HHHHHHhh-C---CCCCeEEee---------------------
Confidence 3678889999999999999998874 222 2222 24444543 1 234555533
Q ss_pred HHHhhhHhhcccccccccccCCcccccccccccCcccccccccccchhhhhhhhhhccCceeeeeeeEEe
Q 000946 665 FVTLGQRVLANPLKCRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYIQV 734 (1212)
Q Consensus 665 FvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLSEDIFaG~N~~lRgG~I~h~EYiQc 734 (1212)
+..|+==.+.|-.+-.-||-+. ....+.||..-++...-+|.+|.+++...+
T Consensus 123 ----------------~~~g~~~~~r~~~~~~~ggf~~--~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~ 174 (196)
T cd02520 123 ----------------CAFGKSMALRREVLDAIGGFEA--FADYLAEDYFLGKLIWRLGYRVVLSPYVVM 174 (196)
T ss_pred ----------------cccCceeeeEHHHHHhccChHH--HhHHHHHHHHHHHHHHHcCCeEEEcchhee
Confidence 2233333444554455566632 123468999999999999999998887644
No 13
>PF14518 Haem_oxygenas_2: Iron-containing redox enzyme; PDB: 3BJD_B.
Probab=31.69 E-value=16 Score=34.85 Aligned_cols=75 Identities=25% Similarity=0.506 Sum_probs=44.6
Q ss_pred CCCCCccCccchhhhccccccccccCCcc------chHHHHHhhhhhHHHHhhcCCCCCceeecccceeecccchhhccc
Q 000946 584 LGEGKPENQNHAVIFTRGNAIQTIDMNQD------NYFEEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVSSLAYF 657 (1212)
Q Consensus 584 LGEGKpeNQNHAiIFtRGE~lQtIDmNQD------nYlEEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvssLa~f 657 (1212)
.|+|.|++ ||.-+|-| .++.++++.+ .+..|+....|..--+-... ...+.++| +
T Consensus 9 ~G~G~~~~-~H~~Lf~~--~L~~~Gi~~~~~~~~~~~~~~~~~~~n~~~~~~~~~-~~~~~~lG---------------~ 69 (106)
T PF14518_consen 9 MGNGDPER-SHPELFRR--FLRALGIDDEPGAYRDPYPPETLALINLFLALCLHR-SHYPEALG---------------A 69 (106)
T ss_dssp TTTT-GGG--HHHHHHH--HHHHTT-----TT-----HHHHHHHHHHHHHH--H--SSTHHHHH---------------H
T ss_pred hCCCCccc-cHHHHHHH--HHHHcCCCCccccccccCCHHHHHHHHHHHHhcccc-hhHHHHHH---------------H
Confidence 58999884 99999977 8888888876 67789998888776654321 12233333 3
Q ss_pred cccchhhHHHhhhHhhccccc
Q 000946 658 MSNQETSFVTLGQRVLANPLK 678 (1212)
Q Consensus 658 ~a~qE~sFvTl~qR~LA~Pl~ 678 (1212)
+.+-|.+.-...+++..- ++
T Consensus 70 ~~~~E~~~~~~~~~~~~~-l~ 89 (106)
T PF14518_consen 70 LLATESSVPQIYRRLIKG-LR 89 (106)
T ss_dssp HHHHHTHHHHHHHHHHHH-HH
T ss_pred HHHHhhcChHHHHHHHHH-HH
Confidence 447888888877765553 44
No 14
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=26.74 E-value=86 Score=37.60 Aligned_cols=41 Identities=24% Similarity=0.485 Sum_probs=32.0
Q ss_pred CCccCccchhhhccccccccccCCccchHHH-HHhhhhhHHHHhhc
Q 000946 587 GKPENQNHAVIFTRGNAIQTIDMNQDNYFEE-ALKMRNLLEEFHAD 631 (1212)
Q Consensus 587 GKpeNQNHAiIFtRGE~lQtIDmNQDnYlEE-aLKmRNlL~EF~~~ 631 (1212)
||+.+-|+|+=.++||+ .+=|++|+.+++ +| +++++.|+++
T Consensus 118 Gka~AlN~gl~~s~g~~--v~~~DaD~~~~~d~L--~~l~~~f~~~ 159 (439)
T TIGR03111 118 GKAKALNAAIYNSIGKY--IIHIDSDGKLHKDAI--KNMVTRFENN 159 (439)
T ss_pred CHHHHHHHHHHHccCCE--EEEECCCCCcChHHH--HHHHHHHHhC
Confidence 79999999999999999 555677888743 44 4778888754
No 15
>PF07304 SRA1: Steroid receptor RNA activator (SRA1); InterPro: IPR009917 This entry consists of several hypothetical mammalian steroid receptor RNA activator proteins. The SRA-RNAs encode stable proteins that are widely expressed and upregulated in breast cancer cell lines. SRA-RNA is a steroid receptor co-activator which acts as a functional RNA. This domain is also found at the C terminus of Sec31, a component of the coat protein complex II (COPII, which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). COPII has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. ; PDB: 2YRU_A.
Probab=26.52 E-value=4.3e+02 Score=28.17 Aligned_cols=59 Identities=15% Similarity=0.232 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHhcccchhhHHHHH---HHHHHHHHhcccccceeccCCchhHHHHHHHHHHHhhccC
Q 000946 190 VEEFYHTLKFILTETLEAEGRMWVERI---YDDINVSVEKRSIHVDFQLTKLPLVISRVTALMGVLKEAE 256 (1212)
Q Consensus 190 v~e~y~s~k~il~~ll~~~~~~~i~~i---~~~i~~~i~~~~~~~~f~l~~Lp~l~~~~~~L~~~L~~~~ 256 (1212)
+.+.+..+..++...-..-.++.++++ ++.+.+++++|++. ..+.+++.+|.+.|...+
T Consensus 44 i~~~~~~L~~v~~~~~~~~~kr~~~D~~KRL~iLfd~ln~g~Ls--------~~v~~~L~~L~~aL~~~d 105 (157)
T PF07304_consen 44 IEEVLRELQRVLEACPPSIKKRVVDDIEKRLNILFDHLNNGKLS--------KPVVDKLHQLAQALQARD 105 (157)
T ss_dssp HHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHT-S---------HHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHcccccchhHHHHHHHHHHHHHHHHhcCCCC--------HHHHHHHHHHHHHHHcCC
Confidence 345555555555544333344433333 66677788888776 348899999999998765
No 16
>PF10569 Thiol-ester_cl: Alpha-macro-globulin thiol-ester bond-forming region; InterPro: IPR019565 This entry contains serum complement C3 and C4 precursors and alpha-macrogrobulins. The alpha-macroglobulin (aM) family of proteins includes protease inhibitors [], typified by the human tetrameric a2-macroglobulin (a2M); they belong to the MEROPS proteinase inhibitor family I39, clan IL. These protease inhibitors share several defining properties, which include (i) the ability to inhibit proteases from all catalytic classes, (ii) the presence of a 'bait region' and a thiol ester, (iii) a similar protease inhibitory mechanism and (iv) the inactivation of the inhibitory capacity by reaction of the thiol ester with small primary amines. aM protease inhibitors inhibit by steric hindrance []. The mechanism involves protease cleavage of the bait region, a segment of the aM that is particularly susceptible to proteolytic cleavage, which initiates a conformational change such that the aM collapses about the protease. In the resulting aM-protease complex, the active site of the protease is sterically shielded, thus substantially decreasing access to protein substrates. Two additional events occur as a consequence of bait region cleavage, namely (i) the h-cysteinyl-g-glutamyl thiol ester becomes highly reactive and (ii) a major conformational change exposes a conserved COOH-terminal receptor binding domain [] (RBD). RBD exposure allows the aM protease complex to bind to clearance receptors and be removed from circulation []. Tetrameric, dimeric, and, more recently, monomeric aM protease inhibitors have been identified [, ]. This short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved. ; PDB: 2B39_B 2PN5_A 4ACQ_C 1HZF_A 2WIN_H 2I07_B 2ICF_B 2XWJ_D 3G6J_B 2NOJ_C ....
Probab=24.83 E-value=27 Score=28.08 Aligned_cols=11 Identities=45% Similarity=0.570 Sum_probs=8.2
Q ss_pred cCCcccccchh
Q 000946 753 AGGNGEQVLSR 763 (1212)
Q Consensus 753 a~GnGEQ~LSR 763 (1212)
=.|+|||++|+
T Consensus 9 P~GCgEQtm~~ 19 (31)
T PF10569_consen 9 PYGCGEQTMSS 19 (31)
T ss_dssp --SSTTHHHHH
T ss_pred CCCcHHHHHHH
Confidence 46999999987
No 17
>PLN02436 cellulose synthase A
Probab=24.79 E-value=5.4e+02 Score=35.23 Aligned_cols=227 Identities=17% Similarity=0.167 Sum_probs=113.7
Q ss_pred cchhhhhhhhhhccCceeeee-eeE--EeccccccCcccccceeeeccCCcccccchhhhHh---cccccchhhhhhhhc
Q 000946 709 ISEDIYAGFNTTLRQGNVTHH-EYI--QVGKGRDVGLNQIAVFEGKVAGGNGEQVLSRDVYR---LGQLFDFFRMMSFYF 782 (1212)
Q Consensus 709 LSEDIFaG~N~~lRgG~I~h~-EYi--QcGKGRDvG~~qI~~FeaKIa~GnGEQ~LSRdvyr---LG~~ldffRmLSfYy 782 (1212)
++||++.|+---.||=+--+| +=. -.|---+ ++.+-..=-..=|.|+=|-.+||+-=- .+.+|.|-.-|++.
T Consensus 792 vTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~-~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl- 869 (1094)
T PLN02436 792 VTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPI-NLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYI- 869 (1094)
T ss_pred eecHHHHHHHHHcCCCceEeCCCCchhhcCcCCC-CHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHH-
Confidence 689999999999999887776 311 1232111 111112223456788888889986322 35678887666544
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeccccccCCchhhhhccchhhhHHHHHHhhhHHHHHHHHHH----
Q 000946 783 TTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGEELQVRAQVTENTALTAALNTQFLFQIGIFTAVPMVLGFILEQG---- 858 (1212)
Q Consensus 783 t~~GFy~n~~~~vltVy~fly~~lyLalsg~~~~~~~~~~~~~~~~l~~~l~~q~~~qlg~l~~lPm~~~~~lE~G---- 858 (1212)
.+.=++++++.. .+| +..=++.-+.|+. +- +-+ +...+-+.+..+++..+...+|--
T Consensus 870 ~~~ly~l~Slp~--liY--~~lP~l~LL~G~~--i~------------P~v-s~~~~~~fi~lfls~~~~~lLE~~wsG~ 930 (1094)
T PLN02436 870 NSVVYPWTSIPL--IVY--CTLPAICLLTGKF--IV------------PEI-SNYASILFMALFISIAATGILEMQWGGV 930 (1094)
T ss_pred HHHHHHHHHHHH--HHH--HHHHHHHHHcCCe--ec------------Ccc-chHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 444455666444 222 2333333355521 11 000 011223344566777777777741
Q ss_pred HHHHHHHHHHHHh--hhccceeEEEeceeeeeecccccccCeeeeccCCceeEee-----cchhhhhhhhhhhhHHHHHH
Q 000946 859 FLAAVVNFITMQL--QLCSVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRH-----IKFSENYRLYSRSHFVKGLE 931 (1212)
Q Consensus 859 ~~~A~~~~~~~~l--~l~~vFf~F~~gt~~h~~~~~il~GGAkY~aTGRGFvi~h-----~~F~~lY~~Ya~Shf~~g~e 931 (1212)
=+++.++==.+.+ ..++-+|-| +++ +.. +.|| ..-+|.|+. ..|+++|..=..+-|....-
T Consensus 931 si~~WWrnQq~w~I~~tSa~Lfav-l~~----iLK--vLgg-----s~~~F~VTsK~~d~~~~a~ly~f~~S~L~iP~tt 998 (1094)
T PLN02436 931 GIDDWWRNEQFWVIGGVSSHLFAL-FQG----LLK--VLAG-----VNTNFTVTSKAADDGEFSELYLFKWTSLLIPPTT 998 (1094)
T ss_pred cHHHhhhhhhHHHHHHHHHHHHHH-HHH----HHH--Hhcc-----CcccceecccccccccccceeeecceeHhHHHHH
Confidence 1233332111111 112222211 010 000 1111 123455554 34778885446778888888
Q ss_pred HHHHHHHHHHhcccC-------CcchhHHHHHHHHHHHHHHHhh
Q 000946 932 VVLLLIVYIAYGYNE-------GGTLGYILLSISSWFMALSWLF 968 (1212)
Q Consensus 932 l~llLi~y~~yg~~~-------~s~~~y~~~t~s~W~~~~s~l~ 968 (1212)
++++-++-.+.|... ....+..-+.+++|+++..|=|
T Consensus 999 i~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf 1042 (1094)
T PLN02436 999 LLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPF 1042 (1094)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHH
Confidence 888776544444221 0112233566788888776644
No 18
>COG4176 ProW ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]
Probab=24.75 E-value=4.7e+02 Score=30.81 Aligned_cols=67 Identities=24% Similarity=0.499 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-HHHHHHHHH-HhhhHHHHHHHHHHhhcc---------cchhhhHh
Q 000946 1119 FACILAFVPTGWGILCIASAWKPLMKKLGLWK-SVRSIARLY-DAGMGMLIFIPIAMFSWF---------PFISTFQT 1185 (1212)
Q Consensus 1119 f~~~lA~i~~g~~il~ia~~~~~~~~~~~~W~-~vr~lar~y-d~~~G~ii~~pia~lsw~---------pf~~~~QT 1185 (1212)
..+.+|+...+|++.......--++..++.|+ +.++||-.. -.++.+++=+|+-++++- |...-+||
T Consensus 61 i~~~la~~~~~~~~~i~t~~~l~~I~~~GlW~~tM~TLaLVl~a~~isivIGiPlGI~~ar~~~~~~i~~PiLDlMQT 138 (290)
T COG4176 61 IVALLAWFASGLGLAIFTLLGLLLIGNLGLWDQTMQTLALVLTATLISIVIGIPLGIWAARSPRVYRIVRPILDLMQT 138 (290)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHhHHHHHHhc
Confidence 44555555556665544444435567789998 567777643 455677777888888763 67777777
No 19
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=22.64 E-value=28 Score=40.36 Aligned_cols=110 Identities=15% Similarity=0.233 Sum_probs=0.0
Q ss_pred CceeeehhHHHHHH--------------HHHHHhhhhhcccc-ccccchhHHHHHHHHHHHHHHHHHHHHhhhcC---CC
Q 000946 1053 TSLTVYGLSWVVFA--------------VLILLFKVFTFSQK-ISVNFQLLLRFIQGLSLLVALAGLSVAVAITK---LS 1114 (1212)
Q Consensus 1053 ~s~~v~~lsw~v~~--------------~~~~i~~~~~~~~~-~~~~~~~~~Rl~~~~~~~~~v~~~~~~~~~~~---l~ 1114 (1212)
.|+++..+.-++++ ++++++.++..+.- ..+..-+++-++.+++.+.++..+..-..+.+ -|
T Consensus 56 ~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Ym~lLr~~GAs 135 (381)
T PF05297_consen 56 YSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFYMWLLRELGAS 135 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhHHHHHHHHHHhhcc
Q 000946 1115 IPDVFACILAFVPTGWGILCIASAWKPLMKKLGLWKSVRSIARLYDAGMGMLIFIPIAMFSWF 1177 (1212)
Q Consensus 1115 ~~d~f~~~lA~i~~g~~il~ia~~~~~~~~~~~~W~~vr~lar~yd~~~G~ii~~pia~lsw~ 1177 (1212)
+..+++-+|||. .+|+..++|. +-...-|.....| +-++.-+|+|-|+
T Consensus 136 ~WtiLaFcLAF~---LaivlLIIAv---~L~qaWfT~L~dL---------~WL~LFlaiLIWl 183 (381)
T PF05297_consen 136 FWTILAFCLAFL---LAIVLLIIAV---LLHQAWFTILVDL---------YWLLLFLAILIWL 183 (381)
T ss_dssp ---------------------------------------------------------------
T ss_pred HHHHHHHHHHHH---HHHHHHHHHH---HHHHHHHHHHHHH---------HHHHHHHHHHHHH
No 20
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].
Probab=22.09 E-value=2.9e+02 Score=29.33 Aligned_cols=22 Identities=14% Similarity=0.016 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC
Q 000946 1091 FIQGLSLLVALAGLSVAVAITK 1112 (1212)
Q Consensus 1091 l~~~~~~~~~v~~~~~~~~~~~ 1112 (1212)
++.+++.++++++.+++++++.
T Consensus 9 i~~iilgilli~~gI~~Lv~~~ 30 (191)
T PF04156_consen 9 IILIILGILLIASGIAALVLFI 30 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444443344444443
No 21
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=21.34 E-value=1.4e+02 Score=30.52 Aligned_cols=131 Identities=14% Similarity=0.202 Sum_probs=70.1
Q ss_pred eecCCCCCCCCCCccCccchhhhccccccccccCCccchH-HHHHhhhhhHHHHhhcCCCCCceeecccceeecccchhh
Q 000946 576 IKLPGNPKLGEGKPENQNHAVIFTRGNAIQTIDMNQDNYF-EEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVSSL 654 (1212)
Q Consensus 576 IkLPG~piLGEGKpeNQNHAiIFtRGE~lQtIDmNQDnYl-EEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvssL 654 (1212)
++.|.| -|++.+-|+|+-.++||++-.+|.. .++ .+++ ..+++.++++. +..++|-+-..+.++....
T Consensus 60 i~~~~n----~G~~~a~N~g~~~a~gd~i~~lD~D--d~~~~~~l--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 128 (201)
T cd04195 60 VPLEKN----RGLGKALNEGLKHCTYDWVARMDTD--DISLPDRF--EKQLDFIEKNP---EIDIVGGGVLEFDSDGNDI 128 (201)
T ss_pred EEcCcc----ccHHHHHHHHHHhcCCCEEEEeCCc--cccCcHHH--HHHHHHHHhCC---CeEEEcccEEEECCCCCee
Confidence 455555 4889999999999999999887743 333 2222 24455565432 3455554433333332211
Q ss_pred cccc-ccchhhHHHhhhHhhcccccccccccCCc-ccccccccccCcccccccccccchhhhhhhhhhccCceeeee
Q 000946 655 AYFM-SNQETSFVTLGQRVLANPLKCRMHYGHPD-VFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHH 729 (1212)
Q Consensus 655 a~f~-a~qE~sFvTl~qR~LA~Pl~vR~HYGHPD-vfd~~F~~TRGGvSKAsk~inLSEDIFaG~N~~lRgG~I~h~ 729 (1212)
.... ......+....++ ..-+.||= ++.|.-...-||-... ...||..-......+|+++.|.
T Consensus 129 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~rr~~~~~~g~~~~~----~~~eD~~~~~r~~~~g~~~~~~ 193 (201)
T cd04195 129 GKRRLPTSHDDILKFARR--------RSPFNHPTVMFRKSKVLAVGGYQDL----PLVEDYALWARMLANGARFANL 193 (201)
T ss_pred ccccCCCCHHHHHHHhcc--------CCCCCChHHhhhHHHHHHcCCcCCC----CCchHHHHHHHHHHcCCceecc
Confidence 1100 0000001111111 11123332 3444444555776533 6799999999999899888764
No 22
>COG1289 Predicted membrane protein [Function unknown]
Probab=20.89 E-value=7.4e+02 Score=31.75 Aligned_cols=31 Identities=29% Similarity=0.533 Sum_probs=24.0
Q ss_pred hcchhHHHHHHHHHHhhhHHHHHHHHHHhhc
Q 000946 1146 LGLWKSVRSIARLYDAGMGMLIFIPIAMFSW 1176 (1212)
Q Consensus 1146 ~~~W~~vr~lar~yd~~~G~ii~~pia~lsw 1176 (1212)
.+.-...-.+.|+-|..+|.++-+-++++.|
T Consensus 469 ~~~~~~~~~~~r~~d~~iG~lIa~~~a~~v~ 499 (674)
T COG1289 469 LGSNGPDYDLPRFLDTLLGSLIALALAFLVW 499 (674)
T ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556677788899999999888888777
Done!