Your job contains 1 sequence.
>000947
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNDIFQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERFGDGDASQMGLDLDEDL
LLDKGTAAGHGVSDADPQGSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAE
PIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNG
DGHTADWPLHKDSNHDTVQCMLPEKNGYHVRDAAVKQAESLGMLSGESQQVNSDKTAASL
NCTNVTCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVV
DADIHACPDAKDPKMLNIDVAHEETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQP
LGVDLHSSERSKMNQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDN
ATASNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGN
KLNSGKKRSYTESTITVESLNSSESFGVDRTKRNSEFIPDDDDLLSSILVGRKSSVLKMK
PTPPVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT
GPEILMIQMQFLEDDIFNEPIFTGMSAELTSVHCEIHDLSKISISETDKDHGSSEIANDI
GCSIAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINS
DTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCSVNHGFGTSSQTDVASAEVCNQPTGD
KTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVET
EAKGTDGVLVEEGKVGVSVENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANGDNS
RLEVRNEDGPLAGDWGSNGKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLDDGKSQVDL
RSPMDDGRMEIEEVTIGNDTEFLNVNDDEVAEDYDDGDGCPEDARVLENSGWSSRTRAVS
KYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPLDNIN
IKPGAKLMKADF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000947
(1212 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2181457 - symbol:SYN4 "sister chromatid cohesi... 959 7.0e-169 2
TAIR|locus:2164501 - symbol:SYN2 species:3702 "Arabidopsi... 297 3.3e-41 3
TAIR|locus:2097548 - symbol:SYN3 "AT3G59550" species:3702... 384 4.7e-41 2
UNIPROTKB|O60216 - symbol:RAD21 "Double-strand-break repa... 376 1.3e-36 3
UNIPROTKB|Q3SWX9 - symbol:RAD21 "Double-strand-break repa... 374 2.3e-36 3
UNIPROTKB|E2QRU9 - symbol:RAD21 "Uncharacterized protein"... 374 2.3e-36 3
UNIPROTKB|F1S1K0 - symbol:LOC100738633 "Uncharacterized p... 374 2.3e-36 3
UNIPROTKB|O93310 - symbol:rad21 "Double-strand-break repa... 370 5.3e-36 3
ZFIN|ZDB-GENE-060503-223 - symbol:rad21b "RAD21 homolog (... 372 7.4e-36 3
UNIPROTKB|F1NYD0 - symbol:RAD21 "Uncharacterized protein"... 367 7.7e-36 4
RGD|1594529 - symbol:Rad21 "RAD21 homolog (S. pombe)" spe... 368 1.3e-35 3
MGI|MGI:108016 - symbol:Rad21 "RAD21 homolog (S. pombe)" ... 368 1.3e-35 3
ZFIN|ZDB-GENE-030131-994 - symbol:rad21a "RAD21 homolog (... 370 1.5e-35 3
FB|FBgn0260987 - symbol:vtd "verthandi" species:7227 "Dro... 356 5.4e-35 3
UNIPROTKB|F1S874 - symbol:RAD21L1 "Uncharacterized protei... 343 6.2e-34 2
UNIPROTKB|D2HSB3 - symbol:RAD21L1 "Double-strand-break re... 347 1.0e-33 4
UNIPROTKB|F1PWJ5 - symbol:RAD21L1 "Uncharacterized protei... 353 2.1e-33 3
MGI|MGI:3652039 - symbol:Rad21l "RAD21-like (S. pombe)" s... 351 4.4e-33 3
RGD|1587557 - symbol:Rad21l1 "RAD21-like 1 (S. pombe)" sp... 356 4.8e-33 3
UNIPROTKB|Q9H4I0 - symbol:RAD21L1 "Double-strand-break re... 350 8.6e-33 3
UNIPROTKB|E1BTV6 - symbol:RAD21L1 "Uncharacterized protei... 362 1.3e-32 3
UNIPROTKB|E5RFV8 - symbol:RAD21 "Double-strand-break repa... 367 1.9e-32 1
UNIPROTKB|E5RIN7 - symbol:RAD21 "Double-strand-break repa... 367 1.9e-32 1
UNIPROTKB|E1C938 - symbol:RAD21L1 "Uncharacterized protei... 362 3.8e-32 4
UNIPROTKB|E1B9J3 - symbol:RAD21L1 "Uncharacterized protei... 346 6.9e-32 4
UNIPROTKB|E1BTU9 - symbol:RAD21L1 "Uncharacterized protei... 357 7.5e-32 3
ZFIN|ZDB-GENE-061103-505 - symbol:rad21l1 "RAD21-like 1 (... 334 6.5e-31 4
WB|WBGene00000591 - symbol:coh-1 species:6239 "Caenorhabd... 312 2.4e-30 3
UNIPROTKB|E5RJK5 - symbol:RAD21 "Double-strand-break repa... 345 4.3e-30 1
WB|WBGene00004737 - symbol:scc-1 species:6239 "Caenorhabd... 301 4.5e-30 5
UNIPROTKB|E5RJW1 - symbol:RAD21 "Double-strand-break repa... 341 1.2e-29 1
ASPGD|ASPL0000069046 - symbol:AN7465 species:162425 "Emer... 288 7.0e-27 3
POMBASE|SPCC338.17c - symbol:rad21 "mitotic cohesin compl... 281 4.5e-24 3
UNIPROTKB|G4MR40 - symbol:MGG_09891 "Double-strand-break ... 275 3.7e-23 2
TAIR|locus:2169667 - symbol:SYN1 "SYNAPTIC 1" species:370... 231 2.7e-20 2
DICTYBASE|DDB_G0276977 - symbol:rad21 "cohesin subunit" s... 242 1.7e-17 5
POMBASE|SPBC29A10.14 - symbol:rec8 "meiotic cohesin compl... 174 3.7e-11 2
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 173 1.1e-08 1
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 173 1.1e-08 1
CGD|CAL0000863 - symbol:MCD1 species:5476 "Candida albica... 131 1.6e-07 5
SGD|S000002161 - symbol:MCD1 "Essential alpha-kleisin sub... 114 3.1e-07 3
SGD|S000001912 - symbol:YFR016C "Putative protein of unkn... 153 1.3e-06 1
ASPGD|ASPL0000077407 - symbol:AN11113 species:162425 "Eme... 140 7.7e-06 2
FB|FBgn0036203 - symbol:Muc68D "Mucin 68D" species:7227 "... 143 2.0e-05 1
MGI|MGI:1929645 - symbol:Rec8 "REC8 homolog (yeast)" spec... 100 3.4e-05 3
UNIPROTKB|H0YLK4 - symbol:REC8 "Meiotic recombination pro... 106 6.2e-05 2
UNIPROTKB|O95072 - symbol:REC8 "Meiotic recombination pro... 106 6.2e-05 2
UNIPROTKB|Q939N5 - symbol:gspB "Platelet binding protein ... 138 0.00015 1
UNIPROTKB|E1BL69 - symbol:REC8 "Uncharacterized protein" ... 108 0.00016 4
UNIPROTKB|Q9NZW4 - symbol:DSPP "Dentin sialophosphoprotei... 131 0.00033 1
FB|FBgn0003137 - symbol:Ppn "Papilin" species:7227 "Droso... 133 0.00048 1
ZFIN|ZDB-GENE-031112-4 - symbol:stm "starmaker" species:7... 124 0.00072 1
UNIPROTKB|G5EHS1 - symbol:MGCH7_ch7g423 "Uncharacterized ... 131 0.00090 3
RGD|1309376 - symbol:Rec8 "REC8 homolog (yeast)" species:... 104 0.00098 3
>TAIR|locus:2181457 [details] [associations]
symbol:SYN4 "sister chromatid cohesion 1 protein 4"
species:3702 "Arabidopsis thaliana" [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISM] [GO:0007062
"sister chromatid cohesion" evidence=ISS;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007067 "mitosis" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000228
GO:GO:0007062 eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:AF400129 IPI:IPI00542370 RefSeq:NP_197131.2
UniGene:At.10001 UniGene:At.67257 ProteinModelPortal:Q8W1Y0
PaxDb:Q8W1Y0 PRIDE:Q8W1Y0 EnsemblPlants:AT5G16270.1 GeneID:831487
KEGG:ath:AT5G16270 TAIR:At5g16270 HOGENOM:HOG000090768
InParanoid:Q8W1Y0 OMA:EYNQDAS PhylomeDB:Q8W1Y0
ProtClustDB:CLSN2690166 Genevestigator:Q8W1Y0 Uniprot:Q8W1Y0
Length = 1031
Score = 959 (342.6 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
Identities = 195/292 (66%), Positives = 219/292 (75%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+ PIALRLSSHLL
Sbjct: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIYSRKVNYLFDDCSEALLK+KQAFRS AVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61 LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE 120
Query: 121 LPDNDIFQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERFGDGDASQMGXXXXXXX 180
LPDN+IFQGNYVDHHVST+EQITLQDTMDG+ YSTSQFGLDERFGDGD SQ
Sbjct: 121 LPDNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALDLDEAV 180
Query: 181 XXXKGTAAG--HGVSDADPQGSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLD 238
K GV D + I + M +SE ++ Q+E + ++
Sbjct: 181 FQDKDVIGSDDEGVPGIDHNAYLDAAA----PGIKDSMEGVSEAMPMDFNEEQVEDLAMN 236
Query: 239 AEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSNELMATESRVN 290
E IE A+AP TPGLV+ PN SS ++ +A DH + ED N+ E + + +N
Sbjct: 237 NEFIEDAQAPQTPGLVEVPNSSSVREQMACDDHMDVEDLNAEEGIKSSGELN 288
Score = 705 (253.2 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
Identities = 222/642 (34%), Positives = 318/642 (49%)
Query: 443 EETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQG 502
EE + ++V PC H + M PG Q + G ++ + + ++ G
Sbjct: 331 EEERAEHVHVTSPCCSHITT-EMEDPG------QVMNEAGANVVPDKPDAV--PPLETPG 381
Query: 503 EECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAP 562
EE + +E +Q + S+ GD Q + D L+NA ++ +L L SD P P
Sbjct: 382 EENRDHFAIATEVNQETDSSLQGDEQAYSRP-DGQLNNAHETDEQLGNLTGFTDSDFPPP 440
Query: 563 EKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNS 622
EK+L+VP ND +VESTP+KE G+ DAGN +GKKR++TEST+T ESLNS
Sbjct: 441 EKVLAVPNRQ-GDGNDFMVESTPDKED-PGTCNDDAGNNNITGKKRTFTESTLTAESLNS 498
Query: 623 SESFGVDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNA 682
ES G+ ++KR ++ +P ILVG KSS LKM+PTP V E A+ KR RSA ++ A
Sbjct: 499 VESVGLIQSKRTADSVPDDDDLLSSILVG-KSSFLKMRPTP-VLEPATTKRLRSAPRSTA 556
Query: 683 LKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIF 742
KRKVLMDD MVLHGD+IRQQLTNTEDIRR+RKKAPCT PEI+M+Q Q LED +F EPIF
Sbjct: 557 TKRKVLMDDPMVLHGDIIRQQLTNTEDIRRVRKKAPCTVPEIVMLQRQALEDGLFKEPIF 616
Query: 743 TGMSAELTSVHCEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVAL 802
TGMS EL S+H E +DL I I E D H S D CS+ V E + S +P A
Sbjct: 617 TGMSVELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNECSVTA-VEENKTEESSDPQAH 675
Query: 803 RNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDVD 862
N+ + QP + Q I+ Q ++ + SD +V+K N E+N + +D
Sbjct: 676 PNDCEEQPGTAHTHPQEEQTINQQEELKDDNELAE-KSDLEVLKE-GNGAADEVNLVVID 733
Query: 863 RGNVEVAEEASCSVNHGFGTSSQTD---VASAEVCNQPTGDKTNTVDASLLVDTVCLTPE 919
+ +EE V S + +VC P V DT
Sbjct: 734 DVSQIPSEEKLDRVEDLQVEESHENHDGEGGQDVCADPNEKSCTDVIEIAEGDTDI---N 790
Query: 920 PTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSV 979
P + ++V + D K EV + ++ + T+ +E G +
Sbjct: 791 PIFNEMDLKVEDELPHEDE-KTDASAEVSELGRDDQTPCDNTVGSTETGCLEAG----DL 845
Query: 980 ENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANG-DNSRLEVRNEDGPLAGDWGS- 1037
N A +E L +A N+ +G++ ET YN N N ++N L G+ S
Sbjct: 846 SNMA-LENCNEPLVEA-NS-DGLNPETESYNKYEPHNEMSNEEASMQNA---LDGEHTSR 899
Query: 1038 NGKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLDDGKSQVD 1079
+G ++ M + E D T + + D ++ ++ Q D
Sbjct: 900 DGLMGDNDEMDTMENAHD-TGFLNVDDDEVDEDHEEDDIQYD 940
Score = 352 (129.0 bits), Expect = 5.0e-134, Sum P(3) = 5.0e-134
Identities = 122/381 (32%), Positives = 182/381 (47%)
Query: 846 KTVQN-EPLAELNEMDVDRGNVEVAEEASCSVNHGFGTSSQTDVASA---EVCNQPTG-- 899
KT ++ +P A N+ + G + ++N ++A EV + G
Sbjct: 665 KTEESSDPQAHPNDCEEQPGTAHTHPQEEQTINQQEELKDDNELAEKSDLEVLKEGNGAA 724
Query: 900 DKTNTVDASLLVDTVCLTP-EPTVD-AQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVA 957
D+ N V ++D V P E +D + ++V S D +G +D D N ++
Sbjct: 725 DEVNLV----VIDDVSQIPSEEKLDRVEDLQVEESHENHDG-EGGQDV-CADPNEKSCTD 778
Query: 958 VETEAKGTDGVLVEEGKVGVSVENGA---DVETDRSVLTDAVNTQEGVSLE-TGGYNDLA 1013
V A+G + ++ + VE+ D +TD S + + + T G +
Sbjct: 779 VIEIAEGDTDINPIFNEMDLKVEDELPHEDEKTDASAEVSELGRDDQTPCDNTVGSTETG 838
Query: 1014 AAN-GDNSRLEVRNEDGPLAGDWGSNGKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLD 1072
GD S + + N + PL + S+G +P + EP + +N ++ +LD
Sbjct: 839 CLEAGDLSNMALENCNEPLV-EANSDGLNPETESYNKYEPHNEMSNEEA----SMQNALD 893
Query: 1073 DGKSQVDLRSPMDDGRMEIEEVTIGNDTEFLXXXXXXXXXXXXXXXXCPED-ARVLENSG 1131
+ D M D E++ + +DT FL +D R+LENSG
Sbjct: 894 GEHTSRD--GLMGDND-EMDTMENAHDTGFLNVDDDEVDEDHEEDDIQYDDETRLLENSG 950
Query: 1132 WSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVE 1191
WSSRTRAV+KYLQTLF +E G+ VL D LL GKTRKEASRMFFETLVLKT+DYI VE
Sbjct: 951 WSSRTRAVAKYLQTLFDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTRDYIQVE 1010
Query: 1192 QARPLDNINIKPGAKLMKADF 1212
Q +P ++I IKP KL K+ F
Sbjct: 1011 QGKPYESIIIKPRPKLTKSIF 1031
Score = 59 (25.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 29/137 (21%), Positives = 61/137 (44%)
Query: 459 HTSDPHMSSPGHDNSL--AQNLQPLGVDLHSSERSKMNQASV-DVQGEECY-LTDVMQSE 514
H + ++PG +S+ P+ + E MN + D Q + L +V S
Sbjct: 199 HNAYLDAAAPGIKDSMEGVSEAMPMDFNEEQVEDLAMNNEFIEDAQAPQTPGLVEVPNS- 257
Query: 515 KSQISGPSVCGDIQE-DNGTLDEPLDNATASN-NELKKLNNSITSDLPAPEKLLSVPEGL 572
S + C D + ++ +E + ++ N NE+ K ++S+ APE ++ E
Sbjct: 258 -SSVREQMACDDHMDVEDLNAEEGIKSSGELNANEMPKRGEDLSSEYNAPESAVTPVEVD 316
Query: 573 LNKPNDLI-VESTPEKE 588
++ ++ + ++ PE+E
Sbjct: 317 KSQIDENVNTQNEPEEE 333
Score = 38 (18.4 bits), Expect = 5.0e-134, Sum P(3) = 5.0e-134
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 410 NAAGSGSLVVVDADIHACPDAKDPKMLNIDVAH 442
N G G+ D + + PD +DP N D +
Sbjct: 448 NRQGDGN----DFMVESTPDKEDPGTCNDDAGN 476
Score = 38 (18.4 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 210 DNISERMNEISEERTVNDGANQLERVGL 237
+NI+ + +E + N +E VGL
Sbjct: 477 NNITGKKRTFTESTLTAESLNSVESVGL 504
Score = 38 (18.4 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 539 DNATASNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGS 593
D+ + + ++K+ S DLP E L + DL P+ E+ G+
Sbjct: 76 DDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFELPDNEIFQGN 130
>TAIR|locus:2164501 [details] [associations]
symbol:SYN2 species:3702 "Arabidopsis thaliana"
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0000798 "nuclear cohesin complex"
evidence=ISS] [GO:0007067 "mitosis" evidence=IEP;RCA] [GO:0006302
"double-strand break repair" evidence=RCA;IMP] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0009555 "pollen development" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0010212 "response to ionizing radiation" evidence=RCA]
[GO:0010332 "response to gamma radiation" evidence=RCA] [GO:0010564
"regulation of cell cycle process" evidence=RCA] [GO:0016444
"somatic cell DNA recombination" evidence=RCA] [GO:0016568
"chromatin modification" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0051726 "regulation
of cell cycle" evidence=RCA] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0006302
EMBL:AB011477 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:AF281154 EMBL:AF400126 EMBL:AF400127 IPI:IPI00520467
IPI:IPI00524230 RefSeq:NP_568586.2 RefSeq:NP_851110.1
UniGene:At.9228 ProteinModelPortal:Q9FQ20 STRING:Q9FQ20
PaxDb:Q9FQ20 PRIDE:Q9FQ20 EnsemblPlants:AT5G40840.2 GeneID:834084
KEGG:ath:AT5G40840 TAIR:At5g40840 eggNOG:NOG315638
HOGENOM:HOG000064652 InParanoid:Q9FQ20 OMA:AIWVAAY PhylomeDB:Q9FQ20
ProtClustDB:CLSN2680390 Genevestigator:Q9FQ20 GermOnline:AT5G40840
GO:GO:0000798 Uniprot:Q9FQ20
Length = 810
Score = 297 (109.6 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 74/173 (42%), Positives = 107/173 (61%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVP-IALRLSSHL 59
MFYS ++++KGPLG IW+AA+ +KL+K+QV T I SVD IL ++ + R+ ++L
Sbjct: 1 MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60
Query: 60 LLGVVRIYSRKVNYLFDDCSEALLKIKQAF------RSTAVDLPPEESTAPYHSITLPET 113
LLGVVRIYS+KV++LFDDC++AL+ +K+ T V LP ++ SI LPE
Sbjct: 61 LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLP---ASIECFSIALPER 117
Query: 114 FDLDDFELPDNDIFQGNYVDHHVSTREQITLQD---TMDGM-AYSTSQFGLDE 162
F+LD F+L + F G V H E ITL+D + M YS +F ++E
Sbjct: 118 FELDAFDLGVLEDFHGGNVKPH----EDITLKDGSQETERMDMYSMERFDMEE 166
Score = 165 (63.1 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 37/91 (40%), Positives = 59/91 (64%)
Query: 1122 EDARVLENSGWSSRTRAVSKYLQTLFV--REPVQGRKVLALDHLLVGKTRKEASRMFFET 1179
++ + L+ WSSRTR V+K+L+ F+ RE + KV L L G+T+KE++R+F+ET
Sbjct: 720 DERQDLQQETWSSRTRNVAKFLEKTFLEQREREEEEKVSLLQ-LCRGRTQKESARLFYET 778
Query: 1180 LVLKTKDYIHVEQARPLDNINIKPGAKLMKA 1210
LVLKTK Y+ V+Q P ++ + ++ KA
Sbjct: 779 LVLKTKGYVEVKQNHPYSDVFLMRVSRPQKA 809
Score = 115 (45.5 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 71/297 (23%), Positives = 125/297 (42%)
Query: 483 VDLHSSERSKMNQA--SVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDN 540
VD H S +++ + +++ E+ + + S PS CG + +G D+P
Sbjct: 271 VDSHESSGDNLHRDGHTENLESEKTSKKTSCEEMQHDRSLPSECGIPEAIHGIEDQP-SG 329
Query: 541 ATASNNELKKLNNSITSDLPAPEKLLS---VPEGLLNKPNDLIVESTPEKEVLAGSGGVD 597
AT N E K++ T + P P + + EG+ K D + E+ GS
Sbjct: 330 ATRINGE-KEIPEMSTLEKPEPVSVTGSRDLQEGV-EKCRDHNEAEMADFELFHGSHKEQ 387
Query: 598 AG-NKLN-SGKKRSYTESTITVESLNSSESFGVDRTKRNSEFIPXXXXXXXXILVGRKSS 655
+ +++N G ++ + S +TV SSE D + P I G S
Sbjct: 388 SETSEVNLHGSEKGFL-SDMTVSKDPSSEFNATDTPVTVTPKTPSRLK----ISEGGTSP 442
Query: 656 VLKMKPTPPVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRK 715
+ PTP +E S + +R KRK L+DD +++ V+++ + ++ + R+
Sbjct: 443 QFSIIPTPAAKE--SSRVSR--------KRKCLIDDEVIIPNKVMKEMIEDSSKLLAKRR 492
Query: 716 KAPCTG-PEILMIQMQFLED-DIFNEPIFTGMSAELTSVHCEIHDLSKISISETDKD 770
P T PE +F F EP+ S++L S+ C+ L + + T KD
Sbjct: 493 NVPHTDCPE--RRTKRFANPFRSFLEPLIQYGSSDLQSLFCQPIKLKNWATTGTPKD 547
Score = 53 (23.7 bits), Expect = 1.4e-34, Sum P(4) = 1.4e-34
Identities = 47/219 (21%), Positives = 83/219 (37%)
Query: 204 TTHWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQ 263
T H E + S + + V D + ++AEP++ E PS N S +
Sbjct: 178 TNHNENKHESFAHDMELDAENVRDTTEEASVRVVEAEPLDSNE-PSR----DHQNASRHR 232
Query: 264 KALASYDHFESEDQNSNELMATESRVNDLSNSDC----HNGDGHTADWP-LHKDSNHDTV 318
+ S D E Q S ++ + + + + C D H + LH+D + + +
Sbjct: 233 EDPES-DDILLEPQMSEDIRIAQEE-DTVRETICTIVQRLVDSHESSGDNLHRDGHTENL 290
Query: 319 QCMLPEKNGYHVRDAAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCP 378
+ EK ++ SL G + ++ + S T + + + PE
Sbjct: 291 ES---EKTSKKTSCEEMQHDRSLPSECGIPEAIHGIEDQPS-GATRINGEKEI--PEMST 344
Query: 379 GSTNMPVSEDRLADYQASNKK-KSHNDAEVSDNAAGSGS 416
PVS D Q +K + HN+AE++D GS
Sbjct: 345 LEKPEPVSVTGSRDLQEGVEKCRDHNEAEMADFELFHGS 383
Score = 42 (19.8 bits), Expect = 1.4e-34, Sum P(4) = 1.4e-34
Identities = 39/173 (22%), Positives = 67/173 (38%)
Query: 506 YLTDVMQSEKSQISGPSVCGDIQEDN-GTLDEPLDNATASNNELKKLNNSITSDLPAPEK 564
+L ++Q S + C I+ N T P D A + E L+ + +P
Sbjct: 514 FLEPLIQYGSSDLQS-LFCQPIKLKNWATTGTPKDTKIARHKEKSSLDT-----VRSPGV 567
Query: 565 LLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSE 624
+LS + N + TP+ LAG V AGN N ST T + + +E
Sbjct: 568 ILSSDQ----TENTQEIMETPQAAALAGLK-VTAGNS-NVVSVEMGASST-TSGTAHQTE 620
Query: 625 SFGVDRTKRNSEFIPXX-XXXXXXILVGRKSSVL----KMKPTPPVREVASRK 672
+ + + S P ++ ++ V+ ++ P PVRE S++
Sbjct: 621 N-AAETPVKPSVIAPETPVRTSEQTVIAPETPVVSEQVEIAPETPVRESMSKR 672
>TAIR|locus:2097548 [details] [associations]
symbol:SYN3 "AT3G59550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0000798 "nuclear cohesin complex"
evidence=ISS] [GO:0007067 "mitosis" evidence=IEP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0009555 "pollen development"
evidence=IMP] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0000280 "nuclear division" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0042023 "DNA endoreduplication" evidence=RCA] [GO:0051225
"spindle assembly" evidence=RCA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007059 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0009555 GO:GO:0009561 EMBL:AL138659
eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
GO:GO:0000798 EMBL:AF281155 EMBL:AF400128 IPI:IPI00518598
IPI:IPI00541511 IPI:IPI00548487 PIR:T49296 RefSeq:NP_191514.1
UniGene:At.1119 ProteinModelPortal:Q9FQ19 SMR:Q9FQ19 PaxDb:Q9FQ19
PRIDE:Q9FQ19 EnsemblPlants:AT3G59550.1 GeneID:825124
KEGG:ath:AT3G59550 TAIR:At3g59550 HOGENOM:HOG000090294
InParanoid:Q9FQ19 OMA:TVWCAAH PhylomeDB:Q9FQ19
ProtClustDB:CLSN2915554 Genevestigator:Q9FQ19 GermOnline:AT3G59550
Uniprot:Q9FQ19
Length = 693
Score = 384 (140.2 bits), Expect = 4.7e-41, Sum P(2) = 4.7e-41
Identities = 110/316 (34%), Positives = 165/316 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFYS +LA+KGPLGT+W AAH+ ++L+K+Q +I +VD+I+FP+VP+ALR SSHLL
Sbjct: 1 MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
+GVVRIYS+KV+YL++D + + +AF ST V+LP + AP S+TLP+ +LD+F+
Sbjct: 61 VGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLPEDARQAPPESVTLPQALNLDEFD 120
Query: 121 LPDNDIFQGNYVDHHVSTREQITLQDTMD-GM-AYSTSQFGLD---ERFG-DGDASQMGX 174
L D D + D+H + E ITL D + G+ Y F D E D D S
Sbjct: 121 LED-DTLDMEF-DNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISESIPMDVDQSTEPV 178
Query: 175 XXXXXXXXXKGTAAGHGVSDADPQGS--VKPTTHWEQDNISERMNEI--------SEERT 224
+ TA G D +P+ S T + N++E E+ +EER
Sbjct: 179 SRHTGEIDVE-TAHETG-PDNEPRDSNIAFDTGTYSPRNVTEEFTEVQDPRQSNLTEERI 236
Query: 225 VNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSNELMA 284
N N G E +A P+ ++ Q+ + + ES D+ NE
Sbjct: 237 PNSERNDATSPGTVPEIERMRDAAHDLSPTSHPSFAAQQQDVR-VERTESLDETLNEKEP 295
Query: 285 TESRVND-LSNSDCHN 299
T +++ + NS H+
Sbjct: 296 TIPSIDEEMLNSGRHS 311
Score = 135 (52.6 bits), Expect = 4.7e-41, Sum P(2) = 4.7e-41
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKV---LALDHLLVGKTRKEASRMFFETLVLKT 1184
+++ + R RA+++YL+ P L+L +L GKTRK A+RMFFETLVLK+
Sbjct: 605 DSAALTGRARALAQYLKQRSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFETLVLKS 664
Query: 1185 KDYIHVEQARPLDNINIK 1202
+ I ++Q RP +I +K
Sbjct: 665 RGLIDMQQDRPYGDIALK 682
Score = 115 (45.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 58/227 (25%), Positives = 97/227 (42%)
Query: 544 SNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLN 603
SN +++ NS +D +P + + E + + +DL S P V+ L+
Sbjct: 229 SNLTEERIPNSERNDATSPGTVPEI-ERMRDAAHDLSPTSHPSFAAQQQDVRVERTESLD 287
Query: 604 SG-KKRSYTESTITVESLNSSESFGVDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPT 662
++ T +I E LNS + + S V S L ++P+
Sbjct: 288 ETLNEKEPTIPSIDEEMLNSGRHSAFE-LRSGSPGSAAGSEEERADFV-HPSPQLVLQPS 345
Query: 663 PPVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGP 722
PP + ++RAR KRK D VL I ++L + D R RKK P +
Sbjct: 346 PPPQP---QRRAR--------KRKNF-DGVTVLTNKNISERLKDPSDTLRKRKKMPSSKL 393
Query: 723 EILMIQMQFLEDDIFNEPIFTGMSAELTSVHCEIHDLSKISISETDK 769
+ + Q +D FNEP+FTG S +L +V + + SK ++ +D+
Sbjct: 394 KFWRMNNQSRKDQNFNEPLFTGFSDDLRNVFEKDYVASKPHLAVSDE 440
Score = 58 (25.5 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 21/94 (22%), Positives = 44/94 (46%)
Query: 526 DIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLIVESTP 585
D+++D TLD DN T S ++ L + I + + P ++ E ++++ + V+ +
Sbjct: 120 DLEDD--TLDMEFDNHTRSEEDIT-LTDQIPTGID-PYVAVTFDEDIISESIPMDVDQST 175
Query: 586 EKEVLAGSGGVDAGNKLNSGKKRSYTESTITVES 619
E V +G +D +G +S I ++
Sbjct: 176 EP-VSRHTGEIDVETAHETGPDNEPRDSNIAFDT 208
Score = 55 (24.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 30/105 (28%), Positives = 45/105 (42%)
Query: 688 LMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNE--PIFTGM 745
L DDT+ + D + EDI + + P TG + + + F ++DI +E P+
Sbjct: 121 LEDDTLDMEFD---NHTRSEEDIT-LTDQIP-TGIDPY-VAVTF-DEDIISESIPMDVDQ 173
Query: 746 SAELTSVHCEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIE 790
S E S H D+ + D + S IA D G NV E
Sbjct: 174 STEPVSRHTGEIDVETAHETGPDNEPRDSNIAFDTGTYSPRNVTE 218
Score = 48 (22.0 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 28/107 (26%), Positives = 44/107 (41%)
Query: 912 DTVCLTPEPTVDAQPVEVGTSVAKMDN-AKGVED---TEVIDRNIENIVAV---ETEAKG 964
++V L +D +E T + DN + ED T+ I I+ VAV E
Sbjct: 106 ESVTLPQALNLDEFDLEDDTLDMEFDNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISE 165
Query: 965 TDGVLVEEGKVGVSVENGA-DVETDRSVLTDAVNTQEGVSLETGGYN 1010
+ + V++ VS G DVET D ++ +TG Y+
Sbjct: 166 SIPMDVDQSTEPVSRHTGEIDVETAHETGPDNEPRDSNIAFDTGTYS 212
>UNIPROTKB|O60216 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9606 "Homo sapiens" [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0071168 "protein localization to
chromatin" evidence=IMP] [GO:0006302 "double-strand break repair"
evidence=TAS] [GO:0006310 "DNA recombination" evidence=TAS]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0000087 "M phase of mitotic cell cycle" evidence=TAS]
[GO:0000236 "mitotic prometaphase" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007091 "metaphase/anaphase transition of mitotic
cell cycle" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0008278 "cohesin
complex" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0006915
Reactome:REACT_115566 GO:GO:0007059 EMBL:CH471060 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0000775 GO:GO:0051301 GO:GO:0006357
Reactome:REACT_111183 GO:GO:0006302 GO:GO:0007091 GO:GO:0007131
GO:GO:0000228 GO:GO:0000236 GO:GO:0008278 Orphanet:199
GO:GO:0071168 CTD:5885 eggNOG:NOG249424 HOGENOM:HOG000233800
HOVERGEN:HBG059956 KO:K06670 OMA:VPREEQQ OrthoDB:EOG47PX5K
Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:X98294 EMBL:D38551
EMBL:AY675320 EMBL:AK289505 EMBL:BC050381 IPI:IPI00006715
RefSeq:NP_006256.1 UniGene:Hs.81848 ProteinModelPortal:O60216
SMR:O60216 DIP:DIP-29201N IntAct:O60216 MINT:MINT-2999858
STRING:O60216 PhosphoSite:O60216 PaxDb:O60216 PeptideAtlas:O60216
PRIDE:O60216 Ensembl:ENST00000297338 GeneID:5885 KEGG:hsa:5885
UCSC:uc003yod.3 GeneCards:GC08M117858 HGNC:HGNC:9811 HPA:CAB022065
HPA:HPA020044 MIM:606462 MIM:614701 neXtProt:NX_O60216
PharmGKB:PA34170 InParanoid:O60216 PhylomeDB:O60216
BioCyc:MetaCyc:ENSG00000164754-MONOMER ChiTaRS:RAD21
GenomeRNAi:5885 NextBio:22884 PMAP-CutDB:O60216 ArrayExpress:O60216
Bgee:O60216 CleanEx:HS_RAD21 Genevestigator:O60216
GermOnline:ENSG00000164754 Uniprot:O60216
Length = 631
Score = 376 (137.4 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 95/273 (34%), Positives = 145/273 (53%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
+ S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLVSTTTSNLLLESEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N+S G
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMG 273
Score = 85 (35.0 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 552 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 608
Query: 1188 IHVEQARPLDNINIKPGAK 1206
I + Q P +I PG +
Sbjct: 609 IELTQEEPYSDIIATPGPR 627
Score = 55 (24.4 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 676 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 48 (22.0 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 371 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 430
+L PE P + + L + + +K+ +D E D A G D + +
Sbjct: 503 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEDDEEEEDEDASGGDQ---DQEERRW-NK 558
Query: 431 KDPKMLN-IDVAHEETASVSINVLKPC 456
+ +ML+ + A +T + SI++L+ C
Sbjct: 559 RTQQMLHGLQRALAKTGAESISLLELC 585
>UNIPROTKB|Q3SWX9 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9913 "Bos taurus" [GO:0071168 "protein
localization to chromatin" evidence=ISS] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 GO:GO:0006915 GO:GO:0007059 GO:GO:0000775
GO:GO:0051301 GO:GO:0007067 GO:GO:0006281 GO:GO:0006357
GO:GO:0000228 GO:GO:0071168 EMBL:BC104612 IPI:IPI00708412
RefSeq:NP_001029889.1 UniGene:Bt.15668 ProteinModelPortal:Q3SWX9
STRING:Q3SWX9 PRIDE:Q3SWX9 Ensembl:ENSBTAT00000009607 GeneID:540966
KEGG:bta:540966 CTD:5885 eggNOG:NOG249424
GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 InParanoid:Q3SWX9 KO:K06670 OMA:VPREEQQ
OrthoDB:EOG47PX5K NextBio:20878937 Gene3D:1.10.10.580
InterPro:IPR023093 Uniprot:Q3SWX9
Length = 630
Score = 374 (136.7 bits), Expect = 2.3e-36, Sum P(3) = 2.3e-36
Identities = 95/273 (34%), Positives = 144/273 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLASTGASNLLLEPEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N+S G
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMG 273
Score = 85 (35.0 bits), Expect = 2.3e-36, Sum P(3) = 2.3e-36
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 551 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 607
Query: 1188 IHVEQARPLDNINIKPGAK 1206
I + Q P +I PG +
Sbjct: 608 IELTQEEPYSDIIATPGPR 626
Score = 55 (24.4 bits), Expect = 2.3e-36, Sum P(3) = 2.3e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 676 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 48 (22.0 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 371 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 430
+L PE P + + L + + +K+ +D E D A G D + +
Sbjct: 502 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEDDEEEEDEDASGGDQ---DQEERRW-NK 557
Query: 431 KDPKMLN-IDVAHEETASVSINVLKPC 456
+ +ML+ + A +T + SI++L+ C
Sbjct: 558 RTQQMLHGLQRALAKTGAESISLLELC 584
>UNIPROTKB|E2QRU9 [details] [associations]
symbol:RAD21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071168 "protein localization to chromatin"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0006357
GO:GO:0000228 GO:GO:0071168 CTD:5885 GeneTree:ENSGT00390000011606
KO:K06670 OMA:VPREEQQ Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:AAEX03008760 RefSeq:XP_539142.2 Ensembl:ENSCAFT00000001286
GeneID:482021 KEGG:cfa:482021 NextBio:20856709 Uniprot:E2QRU9
Length = 631
Score = 374 (136.7 bits), Expect = 2.3e-36, Sum P(3) = 2.3e-36
Identities = 95/273 (34%), Positives = 144/273 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLVSTSASNLLLEPEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N+S G
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMG 273
Score = 85 (35.0 bits), Expect = 2.3e-36, Sum P(3) = 2.3e-36
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 552 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 608
Query: 1188 IHVEQARPLDNINIKPGAK 1206
I + Q P +I PG +
Sbjct: 609 IELTQEEPYSDIIATPGPR 627
Score = 55 (24.4 bits), Expect = 2.3e-36, Sum P(3) = 2.3e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 676 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 48 (22.0 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 371 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 430
+L PE P + + L + + +K+ +D E D A G D + +
Sbjct: 503 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEDDEEEEDEDASGGDQ---DQEERRW-NK 558
Query: 431 KDPKMLN-IDVAHEETASVSINVLKPC 456
+ +ML+ + A +T + SI++L+ C
Sbjct: 559 RTQQMLHGLQRALAKTGAESISLLELC 585
>UNIPROTKB|F1S1K0 [details] [associations]
symbol:LOC100738633 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0000228 "nuclear chromosome" evidence=IEA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0000228 GeneTree:ENSGT00390000011606 KO:K06670 OMA:VPREEQQ
Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:AEMK01148771
EMBL:CU467777 EMBL:CU656020 RefSeq:XP_003481396.1
Ensembl:ENSSSCT00000006600 Ensembl:ENSSSCT00000033947
GeneID:100738633 KEGG:ssc:100738633 Uniprot:F1S1K0
Length = 631
Score = 374 (136.7 bits), Expect = 2.3e-36, Sum P(3) = 2.3e-36
Identities = 95/273 (34%), Positives = 144/273 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLVSTSASNLLLEPEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N+S G
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMG 273
Score = 85 (35.0 bits), Expect = 2.3e-36, Sum P(3) = 2.3e-36
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 552 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 608
Query: 1188 IHVEQARPLDNINIKPGAK 1206
I + Q P +I PG +
Sbjct: 609 IELTQEEPYSDIVATPGPR 627
Score = 55 (24.4 bits), Expect = 2.3e-36, Sum P(3) = 2.3e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 676 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 48 (22.0 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 371 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 430
+L PE P + + L + + +K+ +D E D A G D + +
Sbjct: 503 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEDDEEEEDEDASGGDQ---DQEERRW-NK 558
Query: 431 KDPKMLN-IDVAHEETASVSINVLKPC 456
+ +ML+ + A +T + SI++L+ C
Sbjct: 559 RTQQMLHGLQRALAKTGAESISLLELC 585
>UNIPROTKB|O93310 [details] [associations]
symbol:rad21 "Double-strand-break repair protein rad21
homolog" species:8355 "Xenopus laevis" [GO:0071168 "protein
localization to chromatin" evidence=ISS] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0006915
GO:GO:0007059 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0006281 GO:GO:0000228 GO:GO:0071168 CTD:5885
HOVERGEN:HBG059956 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:AF051786 RefSeq:NP_001083807.1 UniGene:Xl.53864
ProteinModelPortal:O93310 IntAct:O93310 GeneID:399129
KEGG:xla:399129 Uniprot:O93310
Length = 629
Score = 370 (135.3 bits), Expect = 5.3e-36, Sum P(3) = 5.3e-36
Identities = 95/272 (34%), Positives = 142/272 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIICPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDERFGDGDASQMGXX 175
LPD +DI + S E+IT+++ + + FG+D+R + S
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVSNINILQDNDFGDFGMDDREMMREGSAFEDD 180
Query: 176 XXXXXXXXKGTAAGHGVSDADPQGS-VKPTTHWEQDNISERMNE--ISEERTVNDGANQL 232
S + + + ++ ++ DN E NE I +++ +++ A +
Sbjct: 181 MLTTNASNLKLEPEQSTSQLNEKSNHLEYDDQYKDDNFGEG-NEGGILDDKLLSNDAGGI 239
Query: 233 --ERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ + E + E P L + N+S G
Sbjct: 240 FDDPPAMPEEGVAMPEQPVHDDLDDDDNVSMG 271
Score = 86 (35.3 bits), Expect = 5.3e-36, Sum P(3) = 5.3e-36
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E W+ RT+ + LQ + + G + ++L L RK+A+ F+ LVLK +
Sbjct: 550 EERRWNKRTQQMLHGLQRVLAKT---GAESISLLDLCRNTNRKQAAAKFYSFLVLKKQQA 606
Query: 1188 IHVEQARPLDNINIKPGAK 1206
I + Q P +I PG +
Sbjct: 607 IELTQREPYSDIVATPGPR 625
Score = 55 (24.4 bits), Expect = 5.3e-36, Sum P(3) = 5.3e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 676 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 310 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 355
>ZFIN|ZDB-GENE-060503-223 [details] [associations]
symbol:rad21b "RAD21 homolog (S. pombe) b"
species:7955 "Danio rerio" [GO:0000228 "nuclear chromosome"
evidence=IEA] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 ZFIN:ZDB-GENE-060503-223 EMBL:CR786578 GO:GO:0000228
eggNOG:NOG249424 GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 KO:K06670 OMA:VPREEQQ OrthoDB:EOG47PX5K
Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:CR848704 IPI:IPI00491569
RefSeq:NP_001038585.1 UniGene:Dr.84558 Ensembl:ENSDART00000051717
Ensembl:ENSDART00000132800 GeneID:566831 KEGG:dre:566831 CTD:566831
NextBio:20888396 Uniprot:Q1L8E1
Length = 637
Score = 372 (136.0 bits), Expect = 7.4e-36, Sum P(3) = 7.4e-36
Identities = 97/263 (36%), Positives = 140/263 (53%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERFGDGDASQMGXXXXXX 179
LPD +DI + S E+IT+++ + ++ D FG D M
Sbjct: 121 LPDLDDIDVAQQFTLNQSRVEEITMREEVGNLSLLQENDFAD--FGMDDREMMREEGAFE 178
Query: 180 XXXXKGTAAGHGVSDADPQGSVK---PTTHWEQDNISERMNEISEERTVNDGANQLERV- 235
G +A + + +++ SV+ T H E D + + E T +G ++++
Sbjct: 179 VDIIHGASASNLLLESE-SSSVQIADKTNHLEYDQYKDDFGDNPMEST--EGGMLVDKLL 235
Query: 236 -GLDAEPIEYAEAPSTPGLVQEP 257
D I + + P+ P V P
Sbjct: 236 SNEDGGGI-FDDPPAIPEGVMMP 257
Score = 83 (34.3 bits), Expect = 7.4e-36, Sum P(3) = 7.4e-36
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E W+ RT+ + LQ + + G + ++L L +K+A+ F+ LVLK +
Sbjct: 558 EERRWNKRTQQMLHGLQRVIAKT---GAESISLLDLCRNNNKKQAAAKFYSFLVLKKQQA 614
Query: 1188 IHVEQARPLDNINIKPGAK 1206
+ + Q P +I PG +
Sbjct: 615 VELRQDEPYSDIIATPGPR 633
Score = 55 (24.4 bits), Expect = 7.4e-36, Sum P(3) = 7.4e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 676 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 316 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 361
>UNIPROTKB|F1NYD0 [details] [associations]
symbol:RAD21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0071168 "protein localization to
chromatin" evidence=IEA] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 GO:GO:0006357 GO:GO:0000228 GO:GO:0071168
GeneTree:ENSGT00390000011606 OMA:VPREEQQ Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:AADN02022645 IPI:IPI00679990
Ensembl:ENSGALT00000025968 Uniprot:F1NYD0
Length = 633
Score = 367 (134.2 bits), Expect = 7.7e-36, Sum P(4) = 7.7e-36
Identities = 79/168 (47%), Positives = 107/168 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER 163
LPD +DI + S E+IT+++ + ++ FG+D+R
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQDNDFGDFGMDDR 168
Score = 85 (35.0 bits), Expect = 7.7e-36, Sum P(4) = 7.7e-36
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 554 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 610
Query: 1188 IHVEQARPLDNINIKPGAK 1206
I + Q P +I PG +
Sbjct: 611 IELTQEEPYSDIIATPGPR 629
Score = 55 (24.4 bits), Expect = 7.7e-36, Sum P(4) = 7.7e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 676 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 311 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 356
Score = 42 (19.8 bits), Expect = 7.7e-36, Sum P(4) = 7.7e-36
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 249 STPGLVQEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWP 308
S L+ EP S+ + +H E EDQ ++ + L + N DG D P
Sbjct: 186 SASNLLLEPEQSTSHLNEKA-NHLEYEDQYKDDNFGEGNDGGILDDKLLSNNDGGIFDDP 244
Score = 39 (18.8 bits), Expect = 3.4e-34, Sum P(4) = 3.4e-34
Identities = 24/118 (20%), Positives = 46/118 (38%)
Query: 475 AQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTL 534
A NL D + E + Q Q + + + + E S++ + G + ++
Sbjct: 409 ADNLDEFLKDFENPEVPREEQQQQQQQQQRDVIDEPILEEPSRLQESMMEGSRTNLDESV 468
Query: 535 DEPLDNATASNNELKKLNNSITSDLPAPEKLLSVP--EGLLNKPNDLIVESTPEKEVL 590
P T +L+++ P P + L +P E +P + I + PE E+L
Sbjct: 469 MPPPPPQTGVKRKLQQVEPEPVLPHP-PSQQLEIPPVEMPPEEPQN-ICQLIPELELL 524
>RGD|1594529 [details] [associations]
symbol:Rad21 "RAD21 homolog (S. pombe)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0008278 "cohesin complex" evidence=ISO]
[GO:0034991 "nuclear meiotic cohesin complex" evidence=IEA;ISO]
[GO:0071168 "protein localization to chromatin" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 RGD:1594529
GO:GO:0006357 GO:GO:0000228 EMBL:CH473950 GO:GO:0071168 CTD:5885
eggNOG:NOG249424 GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 KO:K06670 OMA:VPREEQQ OrthoDB:EOG47PX5K
Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:BC099200 IPI:IPI00360494
RefSeq:NP_001020872.1 UniGene:Rn.3991 STRING:Q4KLH7
Ensembl:ENSRNOT00000006209 GeneID:314949 KEGG:rno:314949
UCSC:RGD:1594529 InParanoid:Q4KLH7 NextBio:668408
Genevestigator:Q4KLH7 Uniprot:Q4KLH7
Length = 635
Score = 368 (134.6 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 95/273 (34%), Positives = 143/273 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLVSTSASNLLLEPEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N S G
Sbjct: 241 IFDDPPALSETGVMLPEQPAHDDMDEDDNGSLG 273
Score = 85 (35.0 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 556 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 612
Query: 1188 IHVEQARPLDNINIKPGAK 1206
I + Q P +I PG +
Sbjct: 613 IELTQEEPYSDIIATPGPR 631
Score = 55 (24.4 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 676 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 44 (20.5 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 27/152 (17%), Positives = 64/152 (42%)
Query: 306 DWPLHKDSNHDTVQCMLPEKNGYHVRDAAVKQAESLGMLSGESQQVNSDKTAASLNCTNV 365
D P+ ++ + +Q + E + ++ ++A+ G+ ++ QV+ + +
Sbjct: 445 DEPIIEEPSR--LQDSVMEASRTNIEESAMPPPPPQGV-KRKAGQVDPEPAIPPQQVEQM 501
Query: 366 TCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIH 425
+L PE P + + L + + +K+ + E D A G D +
Sbjct: 502 EIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEEEEEEEDEDASGGDQ---DQEER 558
Query: 426 ACPDAKDPKMLN-IDVAHEETASVSINVLKPC 456
+ + +ML+ + A +T + SI++L+ C
Sbjct: 559 RW-NKRTQQMLHGLQRALAKTGAESISLLELC 589
>MGI|MGI:108016 [details] [associations]
symbol:Rad21 "RAD21 homolog (S. pombe)" species:10090 "Mus
musculus" [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0008278 "cohesin complex"
evidence=IDA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IDA] [GO:0051301 "cell division" evidence=IEA] [GO:0071168
"protein localization to chromatin" evidence=ISO]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
MGI:MGI:108016 GO:GO:0006915 GO:GO:0007059 GO:GO:0005654
GO:GO:0000775 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0006357 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0071168 CTD:5885 eggNOG:NOG249424
GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 KO:K06670 OMA:VPREEQQ OrthoDB:EOG47PX5K
Gene3D:1.10.10.580 InterPro:IPR023093 ChiTaRS:RAD21 EMBL:D49429
EMBL:X98293 EMBL:AF332086 EMBL:AF332085 EMBL:AK004746 EMBL:AK163992
EMBL:BC043032 IPI:IPI00329840 PIR:JC4248 RefSeq:NP_033035.3
UniGene:Mm.182628 ProteinModelPortal:Q61550 SMR:Q61550
DIP:DIP-56655N IntAct:Q61550 STRING:Q61550 PhosphoSite:Q61550
PaxDb:Q61550 PRIDE:Q61550 Ensembl:ENSMUST00000022927 GeneID:19357
KEGG:mmu:19357 InParanoid:Q810A8 NextBio:296405 Bgee:Q61550
CleanEx:MM_RAD21 Genevestigator:Q61550
GermOnline:ENSMUSG00000022314 GO:GO:0034991 Uniprot:Q61550
Length = 635
Score = 368 (134.6 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 95/273 (34%), Positives = 143/273 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLVSTSASNLLLEPEQSTSNLNEKMNHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N S G
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLG 273
Score = 85 (35.0 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 556 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 612
Query: 1188 IHVEQARPLDNINIKPGAK 1206
I + Q P +I PG +
Sbjct: 613 IELTQEEPYSDIIATPGPR 631
Score = 55 (24.4 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 676 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 43 (20.2 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
Identities = 19/87 (21%), Positives = 38/87 (43%)
Query: 371 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 430
+L PE P + + L + + +K+ + E D A G D + +
Sbjct: 507 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEEEEEEEDEDASGGDQ---DQEERRW-NK 562
Query: 431 KDPKMLN-IDVAHEETASVSINVLKPC 456
+ +ML+ + A +T + SI++L+ C
Sbjct: 563 RTQQMLHGLQRALAKTGAESISLLELC 589
>ZFIN|ZDB-GENE-030131-994 [details] [associations]
symbol:rad21a "RAD21 homolog (S. pombe) a"
species:7955 "Danio rerio" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 ZFIN:ZDB-GENE-030131-994 GO:GO:0043565
GO:GO:0006357 GO:GO:0043280 GO:GO:0000228 GO:GO:0007064
HOVERGEN:HBG059956 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:BC045311 IPI:IPI01005011 RefSeq:NP_955889.1 UniGene:Dr.94731
ProteinModelPortal:Q7ZW30 STRING:Q7ZW30 GeneID:322275
KEGG:dre:322275 CTD:322275 InParanoid:Q7ZW30 NextBio:20807742
ArrayExpress:Q7ZW30 Uniprot:Q7ZW30
Length = 643
Score = 370 (135.3 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 91/225 (40%), Positives = 130/225 (57%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP + A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEDNREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAYST-SQFGLDERFGDGDASQMGXXXXX 178
LPD +DI + S E+IT+++ + ++ T + FG D FG D M
Sbjct: 121 LPDLDDIDVAQQFTLNQSRVEEITMREEVGNISLMTDNDFG-D--FGMDDREMMREENAF 177
Query: 179 XXXXXKGTAAGHGVSDADPQGSVKP--TTHWEQDNISERMNEISE 221
+ +AA + +A+P + P T + + D+ + E S+
Sbjct: 178 GDIIHESSAANL-LLEAEPGPAHLPDKTPNLDYDDFGDNNLENSD 221
Score = 83 (34.3 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E W+ RT+ + LQ + + G + + L L +K+A+ F+ LVLK +
Sbjct: 564 EERRWNKRTQQMLHGLQRVVAKT---GAQSIGLLELCRNNNKKQAAAKFYSFLVLKKQQA 620
Query: 1188 IHVEQARPLDNINIKPGAK 1206
I + Q P +I PG +
Sbjct: 621 IDLTQTEPYSDIIAAPGPR 639
Score = 55 (24.4 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 676 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLED 734
+ +T A KRK+++D L IR QL++ DI AP T +++M + +
Sbjct: 313 TVKETKAKRKRKLIVDSLKELDSKTIRAQLSDYSDIVTTLDLAPPT-KKLMMWKETGGVE 371
Query: 735 DIFN---EPIFTG 744
+F+ +P++ G
Sbjct: 372 KLFSLPAQPLWNG 384
Score = 47 (21.6 bits), Expect = 9.9e-35, Sum P(3) = 9.9e-35
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 959 ETEAKGTDGVLVEEGKVGVSVENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANGD 1018
+ + +DG ++ + K+ +S E+G + D +TD+V + + +++ + A G
Sbjct: 214 DNNLENSDGGILMD-KI-LSNEDGGGIFDDPPAITDSVMMPQDHGDDDDDFDNFSPAGGP 271
Query: 1019 NSRLEVRNEDGPLAGDWGSNGKD----PTSNHMFSEEPVIDST 1057
+S E P D + P + F+ EP ID T
Sbjct: 272 DSPDSGPVEPLPNTTDQTDQTEQTTLVPNEDEAFALEP-IDIT 313
>FB|FBgn0260987 [details] [associations]
symbol:vtd "verthandi" species:7227 "Drosophila melanogaster"
[GO:0006289 "nucleotide-excision repair" evidence=NAS] [GO:0008278
"cohesin complex" evidence=ISS;IDA;NAS;IPI] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=ISS;IMP;NAS] [GO:0000775
"chromosome, centromeric region" evidence=NAS] [GO:0007067
"mitosis" evidence=IMP] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0005705 "polytene chromosome interband"
evidence=IDA] [GO:0016322 "neuron remodeling" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010628 "positive
regulation of gene expression" evidence=IGI] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0005634
GO:GO:0007052 GO:GO:0016322 GO:GO:0010628 GO:GO:0005721
GO:GO:0000228 GO:GO:0007064 GO:GO:0008278 GO:GO:0005705
EMBL:CM000458 eggNOG:NOG249424 GeneTree:ENSGT00390000011606
KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:AF109926
EMBL:AF267746 EMBL:AF267745 EMBL:BT100037 RefSeq:NP_001015132.1
UniGene:Dm.3062 DIP:DIP-18950N MINT:MINT-1730906 STRING:O96689
EnsemblMetazoa:FBtr0113746 GeneID:3354896 KEGG:dme:Dmel_CG17436
UCSC:CG17436-RA CTD:3354896 FlyBase:FBgn0260987 InParanoid:O96689
OMA:KRLMHWK OrthoDB:EOG44J102 GenomeRNAi:3354896 NextBio:849550
Uniprot:O96689
Length = 715
Score = 356 (130.4 bits), Expect = 5.4e-35, Sum P(3) = 5.4e-35
Identities = 81/167 (48%), Positives = 103/167 (61%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY ILAKKGPL IW+AAH ++K+ K V +T+I SV+ IL P V +ALR S HLL
Sbjct: 1 MFYEHIILAKKGPLARIWLAAHWDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIYSRK YL DC+EA +KIK AFR VDLP A ++ITLPE F D
Sbjct: 61 LGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGMVDLPEGHREANVNAITLPEVFHDFDTA 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERFGD 166
LP+ NDI + S ++IT+++ ++ S D+ FGD
Sbjct: 121 LPELNDIDIEAQFSINQSRADEITMREDYGSLSLSLQ----DDGFGD 163
Score = 93 (37.8 bits), Expect = 5.4e-35, Sum P(3) = 5.4e-35
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 1137 RAVSKYLQTLF--VREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQAR 1194
R ++K LF VR + L L L G +RK+A++ F+ LVLK +H++Q+
Sbjct: 638 RVLNKRAAHLFIDVRAHFIAKDSLELSQLTSGNSRKQAAQKFYSLLVLKKFKVLHIDQSA 697
Query: 1195 PLDNINIKPG 1204
P +I I G
Sbjct: 698 PYADITITRG 707
Score = 60 (26.2 bits), Expect = 5.4e-35, Sum P(3) = 5.4e-35
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 684 KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
KRK+++D+ + G+ ++ QL +T DI AP T
Sbjct: 332 KRKLIIDEIKNISGEEMKAQLADTSDILTTLDLAPPT 368
Score = 43 (20.2 bits), Expect = 3.1e-33, Sum P(3) = 3.1e-33
Identities = 17/55 (30%), Positives = 22/55 (40%)
Query: 459 HTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQS 513
H D + S L N + LGV S E Q S+ Q E + D M+S
Sbjct: 458 HVPDSVVQSLEAPEVLRANHKSLGVSTVSVEIVSKEQESISCQNELTFF-DNMRS 511
Score = 42 (19.8 bits), Expect = 4.0e-33, Sum P(3) = 4.0e-33
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 1049 SEEPVIDSTNSVELGGDTINVSLDDGKSQVDLRSPMD-DGRMEIEEVT-IGNDTE 1101
S+E ID+ ++V ++ S++D K + +L + + E+T + N+ E
Sbjct: 257 SDEDAIDNIHNVPSPATSLVNSIEDEKEENNLNGHASVSENVPMNEITLVQNEDE 311
Score = 41 (19.5 bits), Expect = 5.1e-33, Sum P(3) = 5.1e-33
Identities = 21/71 (29%), Positives = 28/71 (39%)
Query: 255 QEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLS----NSDCHNGDG-HTAD-WP 308
+E S Q L +D+ S D S M S +N+L N + GD + D P
Sbjct: 492 KEQESISCQNELTFFDNMRSPDLLSLNEMEQFSSINELPLTPRNMNHEMGDDFNQGDSTP 551
Query: 309 LHKDSNHDTVQ 319
D H T Q
Sbjct: 552 AGLDHGHATPQ 562
Score = 37 (18.1 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 540 NATASNNELKKLNNSITSDLPAPEKL 565
N SN L + +S+ L APE L
Sbjct: 448 NDNMSNLFLDHVPDSVVQSLEAPEVL 473
>UNIPROTKB|F1S874 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070197 "attachment of telomeric heterochromatin to
nuclear envelope" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007129 "synapsis" evidence=IEA] [GO:0007128 "meiotic prophase
I" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
InterPro:IPR006910 Pfam:PF04825 GO:GO:0005634 GO:GO:0007128
GO:GO:0030893 GeneTree:ENSGT00390000011606 OMA:GMQSFSL
EMBL:FP236274 Ensembl:ENSSSCT00000007870 Uniprot:F1S874
Length = 469
Score = 343 (125.8 bits), Expect = 6.2e-34, Sum P(2) = 6.2e-34
Identities = 75/161 (46%), Positives = 101/161 (62%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ ++++ IL P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DCSEALLK+K FR VDLP E A Y +ITLPE F DF+
Sbjct: 61 LGVVRIYNRKAKYLLADCSEALLKMKMTFRPGLVDLPKESFEATYTAITLPEEFH--DFD 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFG 159
+ N I + + S E+I L +D + + + FG
Sbjct: 119 TQNVNAIDISEHFTPNQSKPEEIPLKEDFGNDLLFPAGSFG 159
Score = 78 (32.5 bits), Expect = 6.2e-34, Sum P(2) = 6.2e-34
Identities = 42/177 (23%), Positives = 74/177 (41%)
Query: 677 ASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDI 736
A + KRK+L+D + ++ +QLT+ D + + AP T ++M + + D +
Sbjct: 289 AEKRKGKKRKLLIDPVKEISSKIMHRQLTSFTDTLMVLELAPPT-QRLMMWKKKGGADTL 347
Query: 737 FNEPIFTGMSAELTSVH--CEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGK- 793
+ + AEL + C + K+ K EI N+ N++E
Sbjct: 348 LSTAAQDLIHAELKVLFTKCFLSSGFKLGRKLMQKKSEREEIGNE-------NIVETSMM 400
Query: 794 QGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQN 850
+GS N + +++S E G F N D +INSD D+V+ V +
Sbjct: 401 KGS--------NSLEELSQSSTWKEEIDGSKCSF---NKDTNKNINSDQDIVEMVSS 446
>UNIPROTKB|D2HSB3 [details] [associations]
symbol:RAD21L1 "Double-strand-break repair protein
rad21-like protein 1" species:9646 "Ailuropoda melanoleuca"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005694 "chromosome"
evidence=ISS] [GO:0007128 "meiotic prophase I" evidence=ISS]
[GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0005634 GO:GO:0007059 GO:GO:0000228 GO:GO:0007128
GO:GO:0030893 Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:GL193270
RefSeq:XP_002925456.1 GeneID:100475087 KEGG:aml:100475087
CTD:642636 Uniprot:D2HSB3
Length = 554
Score = 347 (127.2 bits), Expect = 1.0e-33, Sum P(4) = 1.0e-33
Identities = 74/161 (45%), Positives = 102/161 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ ++++ IL V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSSKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DC+EALLK+K FR VDLP E A Y++ITLPE F DF+
Sbjct: 61 LGVVRIYNRKAKYLLADCNEALLKMKMTFRPGLVDLPKENFEAAYNAITLPEEFH--DFD 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFG 159
+ N I + + S E+ITL +D + + + FG
Sbjct: 119 TQNVNAIDVSEHFTQNQSKPEEITLREDYSNDLLFQAGSFG 159
Score = 68 (29.0 bits), Expect = 1.0e-33, Sum P(4) = 1.0e-33
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 1141 KYLQTL-FVREPVQ-GRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPLDN 1198
+ LQTL +RE + G + +L L RK+A+ F+ LVLK + I + Q+ P +
Sbjct: 483 RILQTLNSLRESNKMGMQYFSLMKLCRNSDRKQAAAKFYSFLVLKKQQAIELSQSDPYAD 542
Query: 1199 INIKPGAKLMK 1209
I G K
Sbjct: 543 IIATVGPMFYK 553
Score = 59 (25.8 bits), Expect = 1.0e-33, Sum P(4) = 1.0e-33
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 677 ASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
A + A KRK+L+D + ++ +QLT+ D + + AP T
Sbjct: 286 AEKRKAKKRKLLIDPIKEISSKIMHKQLTSFMDTLMVLELAPPT 329
Score = 47 (21.6 bits), Expect = 1.0e-33, Sum P(4) = 1.0e-33
Identities = 21/88 (23%), Positives = 42/88 (47%)
Query: 793 KQGSKEPVALRNNGDTQPAET-SIQTESHQG------IDHQFGAQNTDAQGHINSDTDVV 845
K+ +E V +N +T E + Q + +Q ID + + D +INS+ D+V
Sbjct: 379 KESVREEVGSKNIVETSVMEELNFQQDLNQSKTWKDVIDGSKCSSHEDINKNINSEQDIV 438
Query: 846 KTVQN--EPLAELNEM---DVDRGNVEV 868
+ V + E + +N + +++ VE+
Sbjct: 439 EMVSSGTEESSSMNAILAQEIENCTVEL 466
>UNIPROTKB|F1PWJ5 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000228 "nuclear chromosome"
evidence=IEA] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 GO:GO:0000228 GeneTree:ENSGT00390000011606
Gene3D:1.10.10.580 InterPro:IPR023093 CTD:642636 OMA:GMQSFSL
EMBL:AAEX03013845 RefSeq:XP_851946.2 Ensembl:ENSCAFT00000010977
GeneID:609572 KEGG:cfa:609572 Uniprot:F1PWJ5
Length = 555
Score = 353 (129.3 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 75/161 (46%), Positives = 102/161 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ ++++ I+ P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKIISPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DCSEALLK+K FR VDLP E A Y +ITLPE F DF+
Sbjct: 61 LGVVRIYNRKAKYLLADCSEALLKMKMTFRPGLVDLPKENFEAAYSAITLPEEFH--DFD 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTM-DGMAYSTSQFG 159
+ N I H+ S E+ITL++ + + + FG
Sbjct: 119 THNVNAIDVSEQFTHNQSRPEEITLREHYGNDLLFQAGSFG 159
Score = 66 (28.3 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 1120 CPEDARVLENSGWSSRTRAVSKYLQTL-FVREPVQ-GRKVLALDHLLVGKTRKEASRMFF 1177
CP + N R + LQ L +RE + G + +L L RK+A+ F+
Sbjct: 463 CPVELESSGNEQSIDTERWNRRILQMLNSLRESNRMGMQYFSLMKLCRNSDRKQAAAKFY 522
Query: 1178 ETLVLKTKDYIHVEQARPLDNI 1199
LVLK + I + Q+ P +I
Sbjct: 523 SFLVLKKQQAIELSQSAPYADI 544
Score = 61 (26.5 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 33/159 (20%), Positives = 69/159 (43%)
Query: 677 ASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDI 736
A + KRK+L+D + ++ +QLT D + + AP T ++M + + D +
Sbjct: 287 AEKRKGKKRKLLIDPVKEISSKIMHKQLTCFTDTLMVLELAPPT-QRLMMWKKKGGVDTL 345
Query: 737 FNEPIFTGMSAELTSVH--CEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQ 794
+ AEL + C + K+ K+ E+ ++ N+IE K
Sbjct: 346 LSTAAQDLTHAELKMLFTKCFLSSGFKLGRKWIQKESVREEVGSE-------NIIETSK- 397
Query: 795 GSKEPVALRNNGDTQPAETSI---QTESHQGIDHQFGAQ 830
++EP + ++ ++ + I + SH+ I+ F ++
Sbjct: 398 -TEEPNSQQDLNQSKTWKDVINGSKCSSHEDINKNFNSE 435
>MGI|MGI:3652039 [details] [associations]
symbol:Rad21l "RAD21-like (S. pombe)" species:10090 "Mus
musculus" [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005694 "chromosome" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007129 "synapsis" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0030893 "meiotic cohesin complex" evidence=IDA]
[GO:0070197 "attachment of telomeric heterochromatin to nuclear
envelope" evidence=IMP] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 MGI:MGI:3652039 GO:GO:0007059
GO:GO:0007283 GO:GO:0006302 GO:GO:0000800 GO:GO:0007129
GO:GO:0007128 GO:GO:0070197 GO:GO:0030893
GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 Gene3D:1.10.10.580 InterPro:IPR023093
eggNOG:NOG301899 OMA:GMQSFSL OrthoDB:EOG49S67J EMBL:HQ603828
EMBL:AB602048 EMBL:AB574185 EMBL:AL928988 IPI:IPI00752563
RefSeq:NP_001108149.1 UniGene:Mm.473683 ProteinModelPortal:A2AU37
PhosphoSite:A2AU37 PRIDE:A2AU37 Ensembl:ENSMUST00000096439
Ensembl:ENSMUST00000180195 GeneID:668929 KEGG:mmu:668929
UCSC:uc012cfx.1 CTD:668929 InParanoid:A2AU37 NextBio:435965
Genevestigator:A2AU37 Uniprot:A2AU37
Length = 552
Score = 351 (128.6 bits), Expect = 4.4e-33, Sum P(3) = 4.4e-33
Identities = 76/164 (46%), Positives = 104/164 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ +++ I+ P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIQKIISPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DCSEA LK+K FR VDLP E A Y++ITLPE F DFE
Sbjct: 61 LGVVRIYNRKAKYLLADCSEAFLKMKMTFRPGLVDLPKENFEAAYNTITLPEEFH--DFE 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDG-MAYSTSQFGLDE 162
+ + N+I + + S E+ITL++ + + FG DE
Sbjct: 119 IYNINEIDISEPLAQNQSRPEEITLREEYSNDLLFQAGSFG-DE 161
Score = 76 (31.8 bits), Expect = 4.4e-33, Sum P(3) = 4.4e-33
Identities = 30/96 (31%), Positives = 43/96 (44%)
Query: 1120 CPEDARVLENSGWSSRTRAVSKYLQTLF-----VRE-PVQGRKVLALDHLLVGKTRKEAS 1173
CP + LE+SG T A K+ Q LF +RE G + +L L RK+A+
Sbjct: 460 CPAE---LESSGSKQNTEA-EKWNQRLFQTLNVLREFNKMGMQSFSLKKLCRNSDRKQAA 515
Query: 1174 RMFFETLVLKTKDYIHVEQARPLDNINIKPGAKLMK 1209
F+ L+LK I + Q+ P +I G K
Sbjct: 516 AKFYTLLILKKHRAIELSQSVPYADIIATVGPMFYK 551
Score = 50 (22.7 bits), Expect = 4.4e-33, Sum P(3) = 4.4e-33
Identities = 31/159 (19%), Positives = 69/159 (43%)
Query: 625 SFGVDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALK 684
S V+ + + IP L+ + + P + ++A R+R + K
Sbjct: 244 SIMVEPGNSDDQCIPEDEEINEITLLSNEDEGFTLDPIDDL-DIADRRRRK--------K 294
Query: 685 RKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIFTG 744
R++L+D + + +QL + D + AP T ++M + + D + +
Sbjct: 295 RRLLVDPVKEISSKAMHRQLASFMDTLMVLDLAPPT-QRLMMWKKRGGVDMLLSTATQDL 353
Query: 745 MSAELTSVH--CEI---HDLSKISISET-DKDHGSSEIA 777
++ EL + C + + L+K+++ E+ K+ G+ +IA
Sbjct: 354 INDELKMLFTKCFLSSDYKLAKLTLKESVRKEVGNQQIA 392
>RGD|1587557 [details] [associations]
symbol:Rad21l1 "RAD21-like 1 (S. pombe)" species:10116 "Rattus
norvegicus" [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0000800 "lateral element" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005694 "chromosome" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0007129 "synapsis"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=ISO]
[GO:0030893 "meiotic cohesin complex" evidence=ISO] [GO:0070197
"attachment of telomeric heterochromatin to nuclear envelope"
evidence=ISO] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 RGD:1587557 GO:GO:0000228 GO:GO:0007128 GO:GO:0030893
GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580 InterPro:IPR023093
OrthoDB:EOG49S67J IPI:IPI00763893 Ensembl:ENSRNOT00000055455
UCSC:RGD:1587557 Uniprot:D4ADQ7
Length = 550
Score = 356 (130.4 bits), Expect = 4.8e-33, Sum P(3) = 4.8e-33
Identities = 77/164 (46%), Positives = 105/164 (64%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ +++ I+ P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIQKIISPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DCSEA LK+K FR VDLP E A Y++ITLPE F DF+
Sbjct: 61 LGVVRIYNRKAKYLLADCSEAFLKMKMTFRPGLVDLPKENFEAAYNTITLPEEFH--DFD 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMD-GMAYSTSQFGLDE 162
+ + NDI + + S E+ITL++ + + T FG DE
Sbjct: 119 IYNTNDIDISEPLAQNQSRPEEITLREEYSTDLLFQTGSFG-DE 161
Score = 71 (30.1 bits), Expect = 4.8e-33, Sum P(3) = 4.8e-33
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 1127 LENSGWSSRTRAVSKYLQTLF-----VRE-PVQGRKVLALDHLLVGKTRKEASRMFFETL 1180
LE+SG T A K+ Q LF +RE G + +L L RK+A+ F+ L
Sbjct: 462 LESSGSKQNTEA-EKWNQRLFQTLNELREFNKMGMQFFSLIKLCRNSDRKQAAAKFYTLL 520
Query: 1181 VLKTKDYIHVEQARPLDNI 1199
+LK I + Q+ P ++
Sbjct: 521 ILKKHRAIELSQSAPYADV 539
Score = 48 (22.0 bits), Expect = 4.8e-33, Sum P(3) = 4.8e-33
Identities = 17/87 (19%), Positives = 36/87 (41%)
Query: 634 NSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALKRKVLMDDTM 693
+ +IP L+ + + P + ++A R++ + KR++L+D
Sbjct: 251 DDHYIPEDEKINEITLISNEEEGFTLDPIDGL-DIADRRKRK--------KRRLLIDPVK 301
Query: 694 VLHGDVIRQQLTNTEDIRRIRKKAPCT 720
+ + +QLT+ D + AP T
Sbjct: 302 EISSKTMHKQLTSFMDTLMVLDLAPPT 328
Score = 38 (18.4 bits), Expect = 5.2e-32, Sum P(3) = 5.2e-32
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 268 SYDHFESEDQNSNEL 282
S DH+ ED+ NE+
Sbjct: 250 SDDHYIPEDEKINEI 264
>UNIPROTKB|Q9H4I0 [details] [associations]
symbol:RAD21L1 "Double-strand-break repair protein
rad21-like protein 1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0000800 "lateral
element" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0007129 "synapsis" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0070197 "attachment of
telomeric heterochromatin to nuclear envelope" evidence=IEA]
[GO:0030893 "meiotic cohesin complex" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0007128 "meiotic prophase I" evidence=ISS] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0005634
GO:GO:0007059 GO:GO:0000228 GO:GO:0007128 EMBL:AL136531
GO:GO:0030893 EMBL:AL031665 HOGENOM:HOG000233800 HOVERGEN:HBG059956
Gene3D:1.10.10.580 InterPro:IPR023093 CTD:642636 EMBL:BC157891
EMBL:BC171911 IPI:IPI00878979 IPI:IPI00916789 RefSeq:NP_001130038.2
UniGene:Hs.713451 ProteinModelPortal:Q9H4I0 SMR:Q9H4I0
PhosphoSite:Q9H4I0 DMDM:259016327 PaxDb:Q9H4I0 PRIDE:Q9H4I0
Ensembl:ENST00000381882 Ensembl:ENST00000402452
Ensembl:ENST00000409241 GeneID:642636 KEGG:hsa:642636
UCSC:uc010gab.1 GeneCards:GC20P001206 HGNC:HGNC:16271 HPA:HPA053282
neXtProt:NX_Q9H4I0 PharmGKB:PA34171 eggNOG:NOG301899 OMA:GMQSFSL
OrthoDB:EOG49S67J NextBio:114018 ArrayExpress:Q9H4I0 Bgee:Q9H4I0
Genevestigator:Q9H4I0 Uniprot:Q9H4I0
Length = 556
Score = 350 (128.3 bits), Expect = 8.6e-33, Sum P(3) = 8.6e-33
Identities = 74/161 (45%), Positives = 101/161 (62%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ ++++ IL P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DCSEA LK+K F VDLP E A Y++ITLPE F DF+
Sbjct: 61 LGVVRIYNRKAKYLLADCSEAFLKMKMTFCPGLVDLPKENFEASYNAITLPEEFH--DFD 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDG-MAYSTSQFG 159
+ N I + + S E+ITL++ D + + FG
Sbjct: 119 TQNMNAIDVSEHFTQNQSRPEEITLRENFDNDLIFQAESFG 159
Score = 65 (27.9 bits), Expect = 8.6e-33, Sum P(3) = 8.6e-33
Identities = 47/219 (21%), Positives = 86/219 (39%)
Query: 634 NSEFI--PXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALKRKVLMDD 691
NSE I P IL+ + + P + ++A +++ + KR++L+D
Sbjct: 252 NSECICVPENEKMNETILLSTEEEGFTLDPID-ISDIAEKRKGK--------KRRLLIDP 302
Query: 692 TMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIFTGMSAELTS 751
L VI +QLT+ D + + AP T ++M + + + + + AEL
Sbjct: 303 IKELSSKVIHKQLTSFADTLMVLELAPPT-QRLMMWKKRGGVHTLLSTAAQDLIHAELKM 361
Query: 752 VH--CEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQ 809
+ C + K+ K+ E+ N N++E +EP + Q
Sbjct: 362 LFTKCFLSSGFKLGRKMIQKESVREEVGNQ-------NIVETSMM--QEPNYQQELSKPQ 412
Query: 810 PAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTV 848
+ I H H+ D +INS+ D+V+ V
Sbjct: 413 TWKDVIGGSQHSS--HE------DTNKNINSEQDIVEMV 443
Score = 60 (26.2 bits), Expect = 8.6e-33, Sum P(3) = 8.6e-33
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 1127 LENSGWSSRTRAVSKYLQTLFVREPVQ-GRKVLALDHLLVGKTRKEASRMFFETLVLKTK 1185
+E W+ R + + L L RE + G + +L L RK+A+ F+ LVLK +
Sbjct: 477 IETERWNGR---ILQMLNRL--RESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQ 531
Query: 1186 DYIHVEQARPLDNI 1199
I + Q+ P +I
Sbjct: 532 LAIELSQSAPYADI 545
>UNIPROTKB|E1BTV6 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000228 "nuclear chromosome" evidence=IEA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0000228 GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:AADN02019132 IPI:IPI00818854
Ensembl:ENSGALT00000039396 Uniprot:E1BTV6
Length = 613
Score = 362 (132.5 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 113/298 (37%), Positives = 141/298 (47%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY ++ ++GPL IW+AAH E+KL K + + ++ ++ I+ P IALR S HLL
Sbjct: 1 MFYMHLLVNRRGPLAKIWLAAHWEKKLTKAHIFECNLEATIKKIVSPKFTIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DCSEAL K+K AFR VDLP E A Y SITLPE F DFE
Sbjct: 61 LGVVRIYHRKTKYLLSDCSEALTKMKTAFRPGLVDLPEESCEAAYQSITLPEEFH--DFE 118
Query: 121 --LPD-NDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFGLDERFGDGDA-SQMGXX 175
LPD N I + + S E ITL +D + FG ++ + DA +
Sbjct: 119 TTLPDLNAIDVAEHFTLNQSRAEDITLKEDYESNVLLCDRNFGERRKYEESDALRKQSFF 178
Query: 176 XXXXXXXXKGTAAGHGVSDADPQGSVKPTTH-----WEQDNIS-ERMNEISEERTVNDGA 229
A H S A G KP H EQD E E + D
Sbjct: 179 DVSVLMSSCNLVADH--SSASVSGD-KPALHESSYCLEQDCFGDEEAGADMIEILLRDEQ 235
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKAL----ASYDHFESEDQNSNELM 283
N L LD E E P + L QE N + G+ A ASY ++E NE M
Sbjct: 236 NGLTNGILDMEE----ELPMSQDL-QE-NSTDGELAAPPPPASYTAVKTESHLMNETM 287
Score = 63 (27.2 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E WS RT + K LQ + V +L L +RKE + F+ LVL+ +
Sbjct: 534 EEIKWSKRTLQLLKTLQQHLNKSGVNS---FSLRELCRKNSRKEVAVKFYIFLVLQKQMV 590
Query: 1188 IHVEQARPLDNINIKPG 1204
+ + Q P ++ G
Sbjct: 591 VELVQCAPFADVTATAG 607
Score = 53 (23.7 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 255 QEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKDSN 314
+E + + L D E+E + N+L A +R N S+S+ NG G T + + S
Sbjct: 399 KEQDATDESSYLQELDCSEAERKTDNDLFALTAR-N--SSSETVNGFGGTLE-KIQGLSL 454
Query: 315 HDTVQCMLPEKNGYHVRDAAVKQAES 340
+ C+ + G V AA+KQ E+
Sbjct: 455 NKGSSCV---REGV-VETAAIKQDEA 476
Score = 53 (23.7 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 26/111 (23%), Positives = 50/111 (45%)
Query: 679 QTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFN 738
+ N KRK+L+D L I QL N+ AP T +I+M + + + +
Sbjct: 309 KNNKRKRKLLVDADKELSLSAIYHQLNNSVGTLVTLDLAPPT-KQIMMWKESGGVETLLS 367
Query: 739 EPIFTGMSAELTSVHCEIHDLSKIS-ISETDKDHGSSEIAN---DIGCSIA 785
+P AEL + + + S + +T K+ +++ ++ ++ CS A
Sbjct: 368 QPAQHLFHAELQTFFAKCFEREMESEVEKTRKEQDATDESSYLQELDCSEA 418
>UNIPROTKB|E5RFV8 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9606 "Homo sapiens" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] InterPro:IPR006910 Pfam:PF04825
HGNC:HGNC:9811 ChiTaRS:RAD21 EMBL:AC087350 IPI:IPI00980208
Ensembl:ENST00000517485 ArrayExpress:E5RFV8 Bgee:E5RFV8
Uniprot:E5RFV8
Length = 225
Score = 367 (134.2 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 79/168 (47%), Positives = 107/168 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER 163
LPD +DI + S E+IT+++ + ++ FG+D+R
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDR 168
>UNIPROTKB|E5RIN7 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9606 "Homo sapiens" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] InterPro:IPR006910 Pfam:PF04825
HGNC:HGNC:9811 ChiTaRS:RAD21 EMBL:AC087350 IPI:IPI00982810
Ensembl:ENST00000520992 ArrayExpress:E5RIN7 Bgee:E5RIN7
Uniprot:E5RIN7
Length = 228
Score = 367 (134.2 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 79/168 (47%), Positives = 107/168 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER 163
LPD +DI + S E+IT+++ + ++ FG+D+R
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDR 168
>UNIPROTKB|E1C938 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000228 "nuclear chromosome" evidence=IEA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0000228 GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:AADN02019132 IPI:IPI00584752
Ensembl:ENSGALT00000009982 Uniprot:E1C938
Length = 602
Score = 362 (132.5 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 113/298 (37%), Positives = 141/298 (47%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY ++ ++GPL IW+AAH E+KL K + + ++ ++ I+ P IALR S HLL
Sbjct: 1 MFYMHLLVNRRGPLAKIWLAAHWEKKLTKAHIFECNLEATIKKIVSPKFTIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DCSEAL K+K AFR VDLP E A Y SITLPE F DFE
Sbjct: 61 LGVVRIYHRKTKYLLSDCSEALTKMKTAFRPGLVDLPEESCEAAYQSITLPEEFH--DFE 118
Query: 121 --LPD-NDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFGLDERFGDGDA-SQMGXX 175
LPD N I + + S E ITL +D + FG ++ + DA +
Sbjct: 119 TTLPDLNAIDVAEHFTLNQSRAEDITLKEDYESNVLLCDRNFGERRKYEESDALRKQSFF 178
Query: 176 XXXXXXXXKGTAAGHGVSDADPQGSVKPTTH-----WEQDNIS-ERMNEISEERTVNDGA 229
A H S A G KP H EQD E E + D
Sbjct: 179 DVSVLMSSCNLVADH--SSASVSGD-KPALHESSYCLEQDCFGDEEAGADMIEILLRDEQ 235
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKAL----ASYDHFESEDQNSNELM 283
N L LD E E P + L QE N + G+ A ASY ++E NE M
Sbjct: 236 NGLTNGILDMEE----ELPMSQDL-QE-NSTDGELAAPPPPASYTAVKTESHLMNETM 287
Score = 63 (27.2 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E WS RT + K LQ + V +L L +RKE + F+ LVL+ +
Sbjct: 523 EEIKWSKRTLQLLKTLQQHLNKSGVNS---FSLRELCRKNSRKEVAVKFYIFLVLQKQMV 579
Query: 1188 IHVEQARPLDNINIKPG 1204
+ + Q P ++ G
Sbjct: 580 VELVQCAPFADVTATAG 596
Score = 46 (21.3 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 20/86 (23%), Positives = 37/86 (43%)
Query: 679 QTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFN 738
+ N KRK+L+D L I QL N+ AP T +I+M + + + +
Sbjct: 309 KNNKRKRKLLVDADKELSLSAIYHQLNNSVGTLVTLDLAPPT-KQIMMWKESGGVETLLS 367
Query: 739 EPIFTGMSAELTSVHCEIHDLSKISI 764
+P AEL + + + + ++
Sbjct: 368 QPAQHLFHAELQTFFAKCFERGRFAM 393
Score = 39 (18.8 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 842 TDVVKTVQNEPLAELNEMDVDRGNVE-----VAEEASCSVNHGFGTSSQTDVASAE---V 893
T+++ T ++ L EL+ + +R A +S +GFG + Q + A +E +
Sbjct: 414 TEMLITDESSYLQELDCSEAERKTDNDLFALTARNSSSETVNGFGGTLQDEAAFSESSML 473
Query: 894 CNQPTGDKTNTVDASLLVDTVC-LTPEPTVDAQP 926
N G + A + VC L + + A+P
Sbjct: 474 LNNSMGREAPVQHAE--ITHVCILKADSSHTAEP 505
>UNIPROTKB|E1B9J3 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070197 "attachment of telomeric heterochromatin to
nuclear envelope" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007129 "synapsis" evidence=IEA] [GO:0007128 "meiotic prophase
I" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0000228 GO:GO:0007128 GO:GO:0030893
GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580 InterPro:IPR023093
OMA:GMQSFSL EMBL:DAAA02036365 IPI:IPI00704766
Ensembl:ENSBTAT00000001812 Uniprot:E1B9J3
Length = 557
Score = 346 (126.9 bits), Expect = 6.9e-32, Sum P(4) = 6.9e-32
Identities = 75/161 (46%), Positives = 102/161 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ ++++ IL P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETF-DLDDF 119
LGVVRIY+RK YL DCSEALLK+K FR VDLP E A Y +ITLPE F D D
Sbjct: 61 LGVVRIYNRKAKYLLADCSEALLKMKMTFRPGLVDLPKESFEAAYSTITLPEEFHDFDTQ 120
Query: 120 ELPDNDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFG 159
+ D+ + + + S E+ITL +D + + + FG
Sbjct: 121 TMNAIDVSECSIQNQ--SKPEEITLREDYGNDLLFHAGSFG 159
Score = 68 (29.0 bits), Expect = 6.9e-32, Sum P(4) = 6.9e-32
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 677 ASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDI 736
A + RK+L+D + ++ +QLT+ D + + AP T + LM+ Q DI
Sbjct: 289 AEKRKGKNRKLLIDPVKEISSKIMHRQLTSFTDTLMVLELAPPT--QRLMMWKQKGGADI 346
Query: 737 FNEPIFTGMS-AELTSVH--CEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGK 793
++ AEL + C + K+ K+ + ++G + N++E
Sbjct: 347 LLSTAAQDLTHAELKMLFTKCFVSSGFKLGRKLIQKE----SVKEEMG---SKNILETSM 399
Query: 794 QGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQN 850
+EP L+ +QP T+ + H+ NT+ +INSD D+V+ V +
Sbjct: 400 M--EEPNFLQEL--SQPKTWKEVTDGSKCSSHE----NTNK--NINSDQDIVEMVSS 446
Score = 52 (23.4 bits), Expect = 6.9e-32, Sum P(4) = 6.9e-32
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 1154 GRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPLDNI 1199
G + +L L RK+ + F+ L+LK I + Q+ P +I
Sbjct: 501 GMQYFSLMKLCRNSDRKQTAAKFYSFLMLKKHQAIELSQSAPYADI 546
Score = 38 (18.4 bits), Expect = 6.9e-32, Sum P(4) = 6.9e-32
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 487 SSERSKMNQASVDVQGEECYLTDVMQSE 514
S E KM++ +V + EE L + S+
Sbjct: 258 SPENEKMDETTVSKEEEEFILDPIDTSD 285
>UNIPROTKB|E1BTU9 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000800 "lateral element" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0007128
"meiotic prophase I" evidence=IEA] [GO:0007129 "synapsis"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030893 "meiotic cohesin complex" evidence=IEA] [GO:0070197
"attachment of telomeric heterochromatin to nuclear envelope"
evidence=IEA] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 GO:GO:0000228 GO:GO:0007128 GO:GO:0030893
GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:AADN02019132 IPI:IPI00819464 Ensembl:ENSGALT00000039400
OMA:EITHVCI Uniprot:E1BTU9
Length = 630
Score = 357 (130.7 bits), Expect = 7.5e-32, Sum P(3) = 7.5e-32
Identities = 112/300 (37%), Positives = 143/300 (47%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY ++ ++GPL IW+AAH E+KL K + + ++ ++ I+ P IALR S HLL
Sbjct: 1 MFYMHLLVNRRGPLAKIWLAAHWEKKLTKAHIFECNLEATIKKIVSPKFTIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DCSEAL K+K AFR VDLP E A Y SITLPE F DFE
Sbjct: 61 LGVVRIYHRKTKYLLSDCSEALTKMKTAFRPGLVDLPEESCEAAYQSITLPEEFH--DFE 118
Query: 121 --LPD-NDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFGLDERFGDGDA-SQMGXX 175
LPD N I + + S E ITL +D + FG ++ + DA +
Sbjct: 119 TTLPDLNAIDVAEHFTLNQSRAEDITLKEDYESNVLLCDRNFGERRKYEESDALRKQSFF 178
Query: 176 XXXXXXXXKGTAAGHGVSDADPQGSVKPTTH-----WEQDNIS-ERMNEISEERTVNDGA 229
A H S A G KP H EQD E E + D
Sbjct: 179 DVSVLMSSCNLVADH--SSASVSGD-KPALHESSYCLEQDCFGDEEAGADMIEILLRDEQ 235
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSNELMATESRV 289
N L LD E E P + L QE N + G+ A A SE +++ + TES +
Sbjct: 236 NGLTNGILDMEE----ELPMSQDL-QE-NSTDGELA-APPPPASSEFNHADTAVKTESHL 288
Score = 63 (27.2 bits), Expect = 7.5e-32, Sum P(3) = 7.5e-32
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 1128 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1187
E WS RT + K LQ + V +L L +RKE + F+ LVL+ +
Sbjct: 551 EEIKWSKRTLQLLKTLQQHLNKSGVNS---FSLRELCRKNSRKEVAVKFYIFLVLQKQMV 607
Query: 1188 IHVEQARPLDNINIKPG 1204
+ + Q P ++ G
Sbjct: 608 VELVQCAPFADVTATAG 624
Score = 53 (23.7 bits), Expect = 7.5e-32, Sum P(3) = 7.5e-32
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 255 QEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKD-- 312
+E + + L D E+E + N+L A +R N S+S+ NG G T + L +
Sbjct: 405 KEQDATDESSYLQELDCSEAERKTDNDLFALTAR-N--SSSETVNGFGGTLE-SLFRSIL 460
Query: 313 SNHDTVQCMLPEKNGYHVRDAAVKQA 338
++ + +Q + K VR+ V+ A
Sbjct: 461 ADPEKIQGLSLNKGSSCVREGVVETA 486
Score = 53 (23.7 bits), Expect = 7.5e-32, Sum P(3) = 7.5e-32
Identities = 26/111 (23%), Positives = 50/111 (45%)
Query: 679 QTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFN 738
+ N KRK+L+D L I QL N+ AP T +I+M + + + +
Sbjct: 315 KNNKRKRKLLVDADKELSLSAIYHQLNNSVGTLVTLDLAPPT-KQIMMWKESGGVETLLS 373
Query: 739 EPIFTGMSAELTSVHCEIHDLSKIS-ISETDKDHGSSEIAN---DIGCSIA 785
+P AEL + + + S + +T K+ +++ ++ ++ CS A
Sbjct: 374 QPAQHLFHAELQTFFAKCFEREMESEVEKTRKEQDATDESSYLQELDCSEA 424
Score = 38 (18.4 bits), Expect = 2.7e-30, Sum P(3) = 2.7e-30
Identities = 6/10 (60%), Positives = 10/10 (100%)
Query: 811 AETSIQTESH 820
A+T+++TESH
Sbjct: 278 ADTAVKTESH 287
>ZFIN|ZDB-GENE-061103-505 [details] [associations]
symbol:rad21l1 "RAD21-like 1 (S. pombe)"
species:7955 "Danio rerio" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
ZFIN:ZDB-GENE-061103-505 GO:GO:0000228 eggNOG:NOG249424
GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 Gene3D:1.10.10.580 InterPro:IPR023093 CTD:642636
EMBL:CU467960 EMBL:BC125933 IPI:IPI00771566 RefSeq:NP_001073519.1
UniGene:Dr.84879 Ensembl:ENSDART00000079631 GeneID:571082
KEGG:dre:571082 InParanoid:A0JMM5 OMA:TLKEDFG OrthoDB:EOG4GB773
NextBio:20890409 Uniprot:A0JMM5
Length = 546
Score = 334 (122.6 bits), Expect = 6.5e-31, Sum P(4) = 6.5e-31
Identities = 75/163 (46%), Positives = 97/163 (59%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+Q +K+G L IW+AAH E+K+ K V + D+ ++ IL P + I LR S HLL
Sbjct: 1 MFYAQLFTSKRGTLAKIWLAAHWEKKITKAHVFECDLETTIKEILSPQIKIGLRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIYSRK YL DCS+AL+KIK AFR DLP + A +ITLPE F D +
Sbjct: 61 LGVVRIYSRKTRYLLADCSDALVKIKVAFRPGQTDLPDDAMEATLKTITLPEDFTDFDSQ 120
Query: 121 LPD-NDIFQGNYVDHHVSTR---EQITLQDTMDGMAYSTSQFG 159
LPD N I + VDH + E ITL++ + S + G
Sbjct: 121 LPDLNTI---DVVDHFSLNQCRTEDITLKENFGNLFLSLERIG 160
Score = 62 (26.9 bits), Expect = 6.5e-31, Sum P(4) = 6.5e-31
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 1157 VLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPG 1204
V +L L +R + +FF LVL+ + ++++ Q+ P +I PG
Sbjct: 493 VYSLHALCESGSRSYVAALFFCMLVLRKQQFLNLHQSAPYSDIIATPG 540
Score = 59 (25.8 bits), Expect = 6.5e-31, Sum P(4) = 6.5e-31
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 676 SASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
SA + KRK+++D + L IR QL + DI + AP T
Sbjct: 268 SAKKRKVRKRKLVIDRSKQLTNSAIRDQLADCSDILSPLEIAPPT 312
Score = 41 (19.5 bits), Expect = 6.5e-31, Sum P(4) = 6.5e-31
Identities = 15/83 (18%), Positives = 37/83 (44%)
Query: 893 VCN-QPTGDKTNTVDASLLVD------TVCLTPEPTVDAQPVEVGTSVAKMDNAKGVEDT 945
VC+ +P +T+++ L V + P+V+ + + T + ++ +ED
Sbjct: 411 VCHPEPPPSWNSTIESRLEVSYPEPQSEISTLSHPSVEMRETPLVTKTQSVLGSQDLEDR 470
Query: 946 EVIDRNIENIVAVETEAKGTDGV 968
+ R + + A++++ D V
Sbjct: 471 RMTSRAHDLLQALKSQDSSPDAV 493
>WB|WBGene00000591 [details] [associations]
symbol:coh-1 species:6239 "Caenorhabditis elegans"
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0007130
"synaptonemal complex assembly" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=ISS]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0003684 GO:GO:0040011 GO:GO:0045132 GO:GO:0000228
GO:GO:0007130 eggNOG:NOG249424 GeneTree:ENSGT00390000011606
KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:FO080256
PIR:T16582 RefSeq:NP_509262.1 ProteinModelPortal:Q21306 SMR:Q21306
STRING:Q21306 PaxDb:Q21306 EnsemblMetazoa:K08A8.3 GeneID:181003
KEGG:cel:CELE_K08A8.3 UCSC:K08A8.3 CTD:181003 WormBase:K08A8.3
HOGENOM:HOG000020951 InParanoid:Q21306 OMA:DIEQKEP NextBio:911936
Uniprot:Q21306
Length = 652
Score = 312 (114.9 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 71/168 (42%), Positives = 100/168 (59%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+KKGPL +W+AAH E+KL K Q+ +TD+ +V+ I+ P +ALR + HLL
Sbjct: 56 MFYADFVLSKKGPLSKVWLAAHWEKKLSKAQIFETDVDEAVNEIMQPSQKLALRTTGHLL 115
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETF-DLDDF 119
LG+ R+YSRK YL DC+EA LKIK FRS A+D P P SI + + D D
Sbjct: 116 LGICRVYSRKTKYLLADCNEAFLKIKLVFRSGALDQP--NPVLPTFSIQ--DIYGDFGDN 171
Query: 120 ELPDNDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFGLDERFGD 166
LP+ D + N+ S + ITL +D Y+ + D+ FG+
Sbjct: 172 VLPEFDEEELNHAPICQSRLDDITLKEDIPQKFTYNYGEPLEDDDFGE 219
Score = 103 (41.3 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 1122 EDARVLENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLV-GKTRKEASRMFFETL 1180
E+ E++ WS RT A+ LQ + + Q +V LD +L G +RK A+ F+ L
Sbjct: 565 EEPETDEDNRWSKRTHAL---LQNIATKLENQNGQV-ELDEMLKKGTSRKVAAAKFYSLL 620
Query: 1181 VLKTKDYIHVEQARPLDNINIKPGAKL 1207
LK I +EQ P +I IK G +
Sbjct: 621 CLKKNQCIDIEQKEPYGDIMIKAGPNI 647
Score = 50 (22.7 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 667 EVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILM 726
E ++KRA Q N KR+V DD ++ G+ ++ + + DI AP +++M
Sbjct: 365 ERQAQKRAMQKEQ-NMRKRRV--DDVKMITGEEMKGNMADFSDILTRLDLAP-PSRKLMM 420
Query: 727 IQMQFLEDDIFNEPIFTGMS 746
+ + + + + P G S
Sbjct: 421 GKKRSHAEYMHHNPGMIGFS 440
Score = 38 (18.4 bits), Expect = 4.3e-29, Sum P(3) = 4.3e-29
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 601 KLNSGKKRSYTE 612
KL GKKRS+ E
Sbjct: 417 KLMMGKKRSHAE 428
>UNIPROTKB|E5RJK5 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9606 "Homo sapiens" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] InterPro:IPR006910 Pfam:PF04825
HGNC:HGNC:9811 ChiTaRS:RAD21 EMBL:AC087350 IPI:IPI00984166
Ensembl:ENST00000519837 ArrayExpress:E5RJK5 Bgee:E5RJK5
Uniprot:E5RJK5
Length = 124
Score = 345 (126.5 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 69/123 (56%), Positives = 86/123 (69%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD 123
LPD
Sbjct: 121 LPD 123
>WB|WBGene00004737 [details] [associations]
symbol:scc-1 species:6239 "Caenorhabditis elegans"
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040002 "collagen
and cuticulin-based cuticle development" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0007130 "synaptonemal complex assembly"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0003684
"damaged DNA binding" evidence=ISS] [GO:0008278 "cohesin complex"
evidence=IPI] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 GO:GO:0005634 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0003684 GO:GO:0040011 GO:GO:0040035
GO:GO:0045132 GO:GO:0040002 EMBL:FO081114 GO:GO:0000228
GO:GO:0007130 GO:GO:0008278 eggNOG:NOG249424
GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580 InterPro:IPR023093
PIR:G88130 RefSeq:NP_494836.1 ProteinModelPortal:Q19325 SMR:Q19325
DIP:DIP-24317N IntAct:Q19325 MINT:MINT-226784 STRING:Q19325
PaxDb:Q19325 EnsemblMetazoa:F10G7.4 GeneID:173808
KEGG:cel:CELE_F10G7.4 UCSC:F10G7.4 CTD:173808 WormBase:F10G7.4
HOGENOM:HOG000017446 InParanoid:Q19325 NextBio:881199
Uniprot:Q19325
Length = 645
Score = 301 (111.0 bits), Expect = 4.5e-30, Sum P(5) = 4.5e-30
Identities = 75/182 (41%), Positives = 110/182 (60%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+QF+LAKKGPL +W+AAH E+KL K Q+ +TD+ +++ ++ P V +ALR HLL
Sbjct: 1 MFYAQFVLAKKGPLAKVWLAAHWEKKLTKAQIFETDVPQAIEEVIRPKVKMALRTVGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFR---STAVDLPP----EESTAPY---HSITL 110
LG+VRIYS+K YL D +EA K+K FR S VD+P EE + + ++IT+
Sbjct: 61 LGIVRIYSKKTRYLLADTNEAYQKMKINFRNGFSFEVDIPENAEIEEDFSNFIDKYNITV 120
Query: 111 PETFDLDDFELPDNDIFQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERF-GDGDA 169
PE D D E + N VS RE IT+++T++ ++ +F +D F G GD
Sbjct: 121 PEFHDADYNE----QLIMAN-----VSRREDITMKETVN---FNV-EFNIDADFDGFGDE 167
Query: 170 SQ 171
+
Sbjct: 168 GE 169
Score = 82 (33.9 bits), Expect = 4.5e-30, Sum P(5) = 4.5e-30
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 1167 KTRKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAKLMKA 1210
K RK+A+ F+ L L I V+Q+ P I I+PGA +A
Sbjct: 575 KNRKQAAEQFYSLLTLAKSQAISVDQSEPYGEIVIRPGANFKEA 618
Score = 63 (27.2 bits), Expect = 4.5e-30, Sum P(5) = 4.5e-30
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 199 GSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTPGLV 254
GSV+P + E + E+ +R V ++ R+ DA+ + ++E P+ P L+
Sbjct: 178 GSVEPLSLRPTPQ-PESLMEVERDRDVAANGTEISRI--DADSVIFSEGPTRPNLI 230
Score = 54 (24.1 bits), Expect = 4.5e-30, Sum P(5) = 4.5e-30
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 685 RKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 720
RK+++D ++ D R+Q + D R+ + AP T
Sbjct: 329 RKLIVDAETMISNDAFREQQEDFSDTMRVVEMAPPT 364
Score = 42 (19.8 bits), Expect = 4.5e-30, Sum P(5) = 4.5e-30
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1079 DLRSPMDDGRMEIEEVTIGNDTEF 1102
D+R DD R +E+ G++ +F
Sbjct: 457 DVRMDDDDDRQPAQEMDFGDNFDF 480
>UNIPROTKB|E5RJW1 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9606 "Homo sapiens" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] InterPro:IPR006910 Pfam:PF04825
HGNC:HGNC:9811 ChiTaRS:RAD21 EMBL:AC087350 IPI:IPI00981513
Ensembl:ENST00000522699 ArrayExpress:E5RJW1 Bgee:E5RJW1
Uniprot:E5RJW1
Length = 120
Score = 341 (125.1 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 68/122 (55%), Positives = 86/122 (70%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F DF+
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFH--DFD 118
Query: 121 LP 122
P
Sbjct: 119 QP 120
>ASPGD|ASPL0000069046 [details] [associations]
symbol:AN7465 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=IEA] [GO:0008608 "attachment of
spindle microtubules to kinetochore" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030892 "mitotic cohesin complex"
evidence=IEA] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 EMBL:AACD01000129 EMBL:BN001304 GO:GO:0000228
eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
OrthoDB:EOG4C2MKJ RefSeq:XP_680734.1 ProteinModelPortal:Q5AW65
STRING:Q5AW65 EnsemblFungi:CADANIAT00000558 GeneID:2869516
KEGG:ani:AN7465.2 HOGENOM:HOG000162683 OMA:DATKMFF Uniprot:Q5AW65
Length = 584
Score = 288 (106.4 bits), Expect = 7.0e-27, Sum P(3) = 7.0e-27
Identities = 66/129 (51%), Positives = 85/129 (65%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP-DVPIALRLSSHL 59
MFYS+ +L+K GPL +W++A+LERKL K+ + +DI SV +I+ P+ALRLS L
Sbjct: 1 MFYSETLLSKTGPLARVWLSANLERKLSKSHILQSDIESSVSAIVDQGQAPMALRLSGQL 60
Query: 60 LLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAV-DLPPEESTAPYHSITLPETF-DLD 117
LLGVVRIYSRK YL DDC+EAL+KIK AFR T DL AP ITLP+ + D
Sbjct: 61 LLGVVRIYSRKARYLLDDCNEALMKIKMAFRLTNNNDLTTSAVVAP-GGITLPDVLTEAD 119
Query: 118 DFELPDNDI 126
F D+ +
Sbjct: 120 LFMNLDSSL 128
Score = 86 (35.3 bits), Expect = 7.0e-27, Sum P(3) = 7.0e-27
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 1155 RKVLALDHLLVGK--TRKEASRMFFETLVLKTKDYIHVEQ 1192
+K + LL K TR +A++MFFE LVL TKD + VEQ
Sbjct: 508 KKAVKFQDLLPEKKATRADATKMFFEVLVLATKDAVQVEQ 547
Score = 56 (24.8 bits), Expect = 7.0e-27, Sum P(3) = 7.0e-27
Identities = 31/135 (22%), Positives = 56/135 (41%)
Query: 969 LVEEGK-VGVSVENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANGDNSRLEVRNE 1027
L EGK G S++ G+ + D + A +QE LE G L D + L +
Sbjct: 136 LEPEGKRPGPSMDFGSQLFPDTGLRRSA--SQEPALLEDPGDLQLNLGLDDETNLSFSH- 192
Query: 1028 DGPLAGDWGSN-GKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLDDGKSQVDLRSPMDD 1086
D+ G+D + E+ D+ +++G +N+ DD +D
Sbjct: 193 ------DFSMEVGRDAPAPRPMEEDNFSDAGKVIDVGDLGLNLGEDDTPLDAVNFDANED 246
Query: 1087 GRMEIEE-VTIGNDT 1100
+ ++E + +G+DT
Sbjct: 247 NFLPLDEPMDLGDDT 261
Score = 51 (23.0 bits), Expect = 4.5e-26, Sum P(4) = 4.5e-26
Identities = 28/120 (23%), Positives = 46/120 (38%)
Query: 779 DIGCSIAPNVIEG-GKQGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQ---NTDA 834
D G + P+ G + S+EP L + GD Q + E++ H F + + A
Sbjct: 148 DFGSQLFPDT--GLRRSASQEPALLEDPGDLQ-LNLGLDDETNLSFSHDFSMEVGRDAPA 204
Query: 835 QGHINSD--TDVVKTVQNEPLA-ELNEMD--VDRGNVEVAEEASCSVNHGFGTSSQTDVA 889
+ D +D K + L L E D +D N + E+ ++ T VA
Sbjct: 205 PRPMEEDNFSDAGKVIDVGDLGLNLGEDDTPLDAVNFDANEDNFLPLDEPMDLGDDTVVA 264
Score = 47 (21.6 bits), Expect = 3.6e-26, Sum P(4) = 3.6e-26
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 856 LNEMDVDRGN---VEVAEEASCSVNHGFGTSS 884
+++MDVD +E+ EEA V+ G G S
Sbjct: 411 ISDMDVDAAAAPALEIEEEAIVPVDEGVGMES 442
Score = 42 (19.8 bits), Expect = 3.6e-26, Sum P(4) = 3.6e-26
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 481 LGVDLHSSERSKMNQASVDVQGEECYLTDVMQSEKSQISGPSV-CGDIQEDNGTLDEPLD 539
LG+D + S + S++V G + M+ + +G + GD+ + G D PLD
Sbjct: 180 LGLD-DETNLSFSHDFSMEV-GRDAPAPRPMEEDNFSDAGKVIDVGDLGLNLGEDDTPLD 237
Query: 540 NATASNNE 547
NE
Sbjct: 238 AVNFDANE 245
Score = 37 (18.1 bits), Expect = 4.5e-26, Sum P(4) = 4.5e-26
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 932 SVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGV 977
+V K K D+ + D +++ A E + V V+EG VG+
Sbjct: 396 TVRKAGELKRKRDSGISDMDVDAAAAPALEIEEEAIVPVDEG-VGM 440
Score = 37 (18.1 bits), Expect = 6.4e-25, Sum P(3) = 6.4e-25
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 191 GVSDADPQGSVKPTTHWEQDNISERMNEISEERTVN 226
G+SD D + P E++ I + E T++
Sbjct: 410 GISDMDVDAAAAPALEIEEEAIVPVDEGVGMESTLH 445
>POMBASE|SPCC338.17c [details] [associations]
symbol:rad21 "mitotic cohesin complex, non-SMC subunit
Rad21 (kleisin)" species:4896 "Schizosaccharomyces pombe"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IGI] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0008608 "attachment of spindle
microtubules to kinetochore" evidence=IMP] [GO:0030892 "mitotic
cohesin complex" evidence=IDA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 PomBase:SPCC338.17c
GO:GO:0000775 GO:GO:0051301 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0000724 GO:GO:0000794 GO:GO:0008608 GO:GO:0007064
GO:GO:0030892 eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:M96437 PIR:S35547 RefSeq:NP_588151.1
ProteinModelPortal:P30776 IntAct:P30776 STRING:P30776
EnsemblFungi:SPCC338.17c.1 GeneID:2539447 KEGG:spo:SPCC338.17c
OMA:VEACNTI OrthoDB:EOG4C2MKJ NextBio:20800609 PMAP-CutDB:P30776
Uniprot:P30776
Length = 628
Score = 281 (104.0 bits), Expect = 4.5e-24, Sum P(3) = 4.5e-24
Identities = 96/312 (30%), Positives = 145/312 (46%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDV-PIALRLSSHL 59
MFYS+ IL+KKGPL +W+AAH E+KL K Q T I SV +I+ + P+ALRLS L
Sbjct: 1 MFYSEAILSKKGPLAKVWLAAHWEKKLSKVQTLHTSIEQSVHAIVTEETAPMALRLSGQL 60
Query: 60 LLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDL-PP---------EESTAPYHSIT 109
+LGVVRIYSRK YL +DC+EAL+++K +F+ VD+ P +++ ++T
Sbjct: 61 MLGVVRIYSRKARYLLEDCTEALMRLKMSFQPGQVDMIEPATALQSLKGKDAVTQSANLT 120
Query: 110 LPETFDLDDFELPDNDI-FQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERFGDGD 168
LPET D +PD+ FQ + + +R TL+ + + S+S F
Sbjct: 121 LPETITEFDLLVPDSTFDFQWSQL-LRTPSRSSNTLE--LHSLPISSSP-----SFPSSQ 172
Query: 169 AS-QMGXXXXXXXXXXKGTAAGHGVSDAD---P---QGSVKP-TTHWEQDNISERMNEIS 220
S + G G + H +D P G+ P + H DN S+ E+
Sbjct: 173 LSIEAGRNAQVESGFSLGESFAHVGNDMQFHLPISNSGAATPRSVH--SDNQSQISIEVG 230
Query: 221 EERTVNDGANQLERVG--LDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQN 278
+ + +G + P STP ++ S + LA D D
Sbjct: 231 RDAPAAAATDLSGIIGPQMTKSPASSVTHFSTPSMLPIGGTSLDDELLAPVDDLNL-DLG 289
Query: 279 SNELMATESRVN 290
++L+ E N
Sbjct: 290 LDDLLGDEQGAN 301
Score = 83 (34.3 bits), Expect = 4.5e-24, Sum P(3) = 4.5e-24
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 1153 QGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPLDN 1198
+G KV + L G R+EA ++FF+ LVL TKD I V+Q + N
Sbjct: 569 EGEKV-SFQTLSAGCNREEAVQLFFDVLVLATKDVISVKQDVAIQN 613
Score = 42 (19.8 bits), Expect = 4.5e-24, Sum P(3) = 4.5e-24
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 917 TPEPTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGK 974
+PE A+ TS + A+ ++ E+ + NI + V+ EG+
Sbjct: 444 SPEEVEPAKHQRTDTSTENQETAEVLDPEEIAAAELANITEAAIATLPQETVVQPEGE 501
>UNIPROTKB|G4MR40 [details] [associations]
symbol:MGG_09891 "Double-strand-break repair protein rad21"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 EMBL:CM001231 GO:GO:0043581 GO:GO:0000228
KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
RefSeq:XP_003709984.1 EnsemblFungi:MGG_09891T0 GeneID:2680935
KEGG:mgr:MGG_09891 Uniprot:G4MR40
Length = 625
Score = 275 (101.9 bits), Expect = 3.7e-23, Sum P(2) = 3.7e-23
Identities = 74/175 (42%), Positives = 100/175 (57%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP--DVPIALRLSSH 58
MFYS +L GPL +W+AA++ERKL K + +++ SV+ I+ P + P+ALRLS
Sbjct: 1 MFYSDTLLRTTGPLSRVWLAANMERKLSKAHILQSNLRHSVEQIIQPSEEAPLALRLSGQ 60
Query: 59 LLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAV-DLPPEESTAPYHSITLPETF--- 114
LLLGVVRIYSRK YL +DC+EAL+KIK AFRS+ DLP S+ L +
Sbjct: 61 LLLGVVRIYSRKARYLLEDCNEALMKIKMAFRSSGNNDLPTNLHLPNRESLMLQDRITPH 120
Query: 115 -DLDDFE----LPDNDIFQGNYVDH--HVSTREQITLQDTMDGMAYSTSQFGLDE 162
+LDD L +D+ + VS RE I LQ+ ++ SQF DE
Sbjct: 121 DNLDDLPPEPTLNFDDLTTSQQLGRKGRVSNRE-INLQED-----FNNSQFLQDE 169
Score = 78 (32.5 bits), Expect = 3.7e-23, Sum P(2) = 3.7e-23
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 1168 TRKEASRMFFETLVLKTKDYIHVEQ 1192
T+ +A++MFFE LVL TKD I VEQ
Sbjct: 550 TKADATKMFFECLVLATKDAIKVEQ 574
>TAIR|locus:2169667 [details] [associations]
symbol:SYN1 "SYNAPTIC 1" species:3702 "Arabidopsis
thaliana" [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISM] [GO:0007062 "sister chromatid cohesion"
evidence=RCA;IMP] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0008278 "cohesin complex" evidence=ISS]
[GO:0005694 "chromosome" evidence=IDA] [GO:0006325 "chromatin
organization" evidence=IMP] [GO:0051455 "attachment of spindle
microtubules to kinetochore involved in homologous chromosome
segregation" evidence=IMP] [GO:0051754 "meiotic sister chromatid
cohesion, centromeric" evidence=IMP] [GO:0006302 "double-strand
break repair" evidence=RCA] [GO:0006312 "mitotic recombination"
evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0007131
"reciprocal meiotic recombination" evidence=RCA] [GO:0042138
"meiotic DNA double-strand break formation" evidence=RCA]
[GO:0045132 "meiotic chromosome segregation" evidence=RCA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0051754 EMBL:AB005241
GO:GO:0006325 GO:GO:0000228 GO:GO:0051455 GO:GO:0008278
GO:GO:0010032 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:AF080620 EMBL:AF080619 EMBL:AJ238306 IPI:IPI00517990
IPI:IPI00540220 PIR:T52571 RefSeq:NP_196168.1 RefSeq:NP_850773.1
UniGene:At.48986 UniGene:At.690 ProteinModelPortal:Q9S7T7
SMR:Q9S7T7 STRING:Q9S7T7 PRIDE:Q9S7T7 EnsemblPlants:AT5G05490.1
GeneID:830432 KEGG:ath:AT5G05490 GeneFarm:1768 TAIR:At5g05490
eggNOG:NOG252146 HOGENOM:HOG000083970 InParanoid:Q9S7T7 OMA:RLSGILM
PhylomeDB:Q9S7T7 ProtClustDB:CLSN2686639 Genevestigator:Q9S7T7
Uniprot:Q9S7T7
Length = 627
Score = 231 (86.4 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 57/133 (42%), Positives = 80/133 (60%)
Query: 7 ILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLLLGVVRI 66
+LA+K PLG IW+AA L K+ + ++ DI + IL P VP+ALRLS L+ GVV +
Sbjct: 17 LLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIV 76
Query: 67 YSRKVNYLFDDCSEALLKIKQAFRSTAVD----LPPEESTAPYHSITLPETFDLD--DFE 120
Y RKV LFDD + L++I A+R+ +V LP ++ A ++TLPE + D DFE
Sbjct: 77 YERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFE 136
Query: 121 LPDNDIFQGNYVD 133
N GNY+D
Sbjct: 137 QTRNVPKFGNYMD 149
Score = 97 (39.2 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 1136 TRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARP 1195
T ++ +L+T F E +V +L+ L VG R A+++FF++ VL T+ I V QA P
Sbjct: 558 TDSIKSHLKTHF--ETPGAPQVESLNKLAVGMDRNAAAKLFFQSCVLATRGVIKVNQAEP 615
Query: 1196 LDNINIKPGAKL 1207
+I I G +
Sbjct: 616 YGDILIARGPNM 627
>DICTYBASE|DDB_G0276977 [details] [associations]
symbol:rad21 "cohesin subunit" species:44689
"Dictyostelium discoideum" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
dictyBase:DDB_G0276977 EMBL:AAFI02000019 GO:GO:0000228
eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
RefSeq:XP_642955.1 ProteinModelPortal:Q550H7 PRIDE:Q550H7
GeneID:8620824 KEGG:ddi:DDB_G0276977 InParanoid:Q550H7
Uniprot:Q550H7
Length = 821
Score = 242 (90.2 bits), Expect = 1.7e-17, Sum P(5) = 1.7e-17
Identities = 53/115 (46%), Positives = 76/115 (66%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSV--------------DSILF 46
MF+SQ +LAK+G LG IW+A H ++KL KN V T+I SV ++IL
Sbjct: 1 MFFSQIVLAKRGALGKIWLAGHWDKKLAKNVVFKTNIPKSVKINKEINKKKKKKIETILN 60
Query: 47 PDVPIALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTA-VDLPPEE 100
P P+ALR++SHLLLGV RI+S+K YL DC+EA++K+K ++ + +DLP E+
Sbjct: 61 PHSPMALRMTSHLLLGVARIFSKKAKYLLSDCTEAVIKLKGLSKTISKIDLPSEQ 115
Score = 65 (27.9 bits), Expect = 1.7e-17, Sum P(5) = 1.7e-17
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 1168 TRKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAKLMK 1209
TR A+ F+E LVLKTK +++EQ P ++ P K+ K
Sbjct: 765 TRLVAACYFYELLVLKTKVLVNLEQ--PENDTETYPDIKISK 804
Score = 51 (23.0 bits), Expect = 1.7e-17, Sum P(5) = 1.7e-17
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 779 DIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGIDHQ 826
D G ++ P GG + +R+ D PA T +T HQ
Sbjct: 286 DEGMNMPPQDDGGGDDQQHVDIGMRHGDDDYPAYTGPETHDDDQQPHQ 333
Score = 39 (18.8 bits), Expect = 1.7e-17, Sum P(5) = 1.7e-17
Identities = 11/49 (22%), Positives = 20/49 (40%)
Query: 980 ENGADVETDRSVLTDAVNTQEGVSLET---GGYNDLAAANGDNSRLEVR 1025
ENG + +SV TD ++ + G D A + + E++
Sbjct: 338 ENGRPITPAKSVTTDKTGEEDTTTTTASVGGATTDNNVATEEKTEFEIQ 386
Score = 37 (18.1 bits), Expect = 1.7e-17, Sum P(5) = 1.7e-17
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 544 SNNELKKLNNSITSDLPAPEKLLSVPEGLL 573
S+N+ N S T+ LP ++ L G++
Sbjct: 254 SDNQNPLFNYSATTPLPKSQRELMEDAGMV 283
>POMBASE|SPBC29A10.14 [details] [associations]
symbol:rec8 "meiotic cohesin complex subunit Rec8"
species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear
chromosome" evidence=IC] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0008278
"cohesin complex" evidence=IDA] [GO:0030893 "meiotic cohesin
complex" evidence=IDA] [GO:0030999 "linear element assembly"
evidence=IMP] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=IMP] [GO:0045143 "homologous chromosome
segregation" evidence=IDA] [GO:0045144 "meiotic sister chromatid
segregation" evidence=IDA;IMP] [GO:0051455 "attachment of spindle
microtubules to kinetochore involved in homologous chromosome
segregation" evidence=IMP] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 PomBase:SPBC29A10.14 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0007131 GO:GO:0000228 GO:GO:0042138
GO:GO:0051455 GO:GO:0045144 GO:GO:0000939 GO:GO:0030893
GO:GO:0030999 Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:AJ223299
EMBL:AB018077 EMBL:M85298 PIR:T43428 RefSeq:NP_596059.1
ProteinModelPortal:P36626 IntAct:P36626 STRING:P36626
EnsemblFungi:SPBC29A10.14.1 GeneID:2540458 KEGG:spo:SPBC29A10.14
eggNOG:NOG42761 KO:K12780 OrthoDB:EOG45F0XT NextBio:20801585
Uniprot:P36626
Length = 561
Score = 174 (66.3 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 55/178 (30%), Positives = 88/178 (49%)
Query: 1 MFYSQFILAK-KGPLGTIWIAA-----HLERKLRKNQVADTDIGVSVDSILFPDVPIALR 54
MFY+Q +L K KG +G IW+AA H RKL K + DI + D + F P+ALR
Sbjct: 1 MFYNQDVLTKEKGGMGVIWLAATLGSKHSLRKLHKKDIMSVDIDEACDFVAFSPEPLALR 60
Query: 55 LSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQA---FRSTA---VDLPPEESTAPYHSI 108
LSS+L++GV R+++ + ++ S L++++ F S +D+ E+ T P +
Sbjct: 61 LSSNLMIGVTRVWAHQYSFFHSQVSTLHLRVRKELDHFTSKPFKNIDIQNEQ-TNPKQLL 119
Query: 109 T------LPETFDLDDFELPDNDIFQGNYVDHHVSTREQITLQDTM-DGMAY--STSQ 157
+PE D F LP D+ I++ +T+ D +Y +TSQ
Sbjct: 120 LAEDPAFIPEVSLYDAFNLPSVDLHVDMSSFTQPKENPNISVLETLPDSTSYLINTSQ 177
Score = 67 (28.6 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 40/203 (19%), Positives = 85/203 (41%)
Query: 436 LNIDVAH--EETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKM 493
L++D++ + + +I+VL+ TS ++ + + SL N+ ++ R+
Sbjct: 143 LHVDMSSFTQPKENPNISVLETLPDSTS--YLINTSQNYSLRNNVSSF---VYEDSRAFS 197
Query: 494 NQASVDVQGEECYLTDVMQSEKSQI-SGPSVCGDIQEDN-GTLDEPLDNATASNNELKKL 551
+ +D + +E D+ + K I S PS+ Q N G++ N+ + +
Sbjct: 198 TEEPLDFEFDEN--GDIQELTKGTINSDPSLQAASQHSNLGSVQREY-NSEEQESRIHMF 254
Query: 552 NNSITSD-LPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSY 610
I D LP P L SV + N+ ++ +++L ++ + S +++Y
Sbjct: 255 E--IDEDVLPLPVPLQSVMDSEHNENEPRALKRRKVQKLLEPDENIELSTRTLSQWRKNY 312
Query: 611 TESTITVESLNSSESFGVDRTKR 633
E I +E+ G K+
Sbjct: 313 VERMIALEATKYVRRRGASSAKK 335
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 173 (66.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 138/826 (16%), Positives = 308/826 (37%)
Query: 272 FESEDQNSNELMATESRVNDLSN-SDCHNGDGHTADWPLHKDSNHDTVQCMLPEKNG--- 327
F +D S E E + S C+ GD + +C + N
Sbjct: 28 FGQDDSLSIEKRTNEYTTPEYGGTSHCNGGDKNCYPQCFDHRGQPKKDKCCFDKHNKVLY 87
Query: 328 -YHVRDAAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMPVS 386
Y ++ + S + S S+ ++S AS + +T + + S+ + S
Sbjct: 88 PYPCTSSSSSSSSSSTVSSSSSEVISSSSEEAS--SSEITSSSEISSSSEVSSSSEVLSS 145
Query: 387 EDRLAD----YQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAH 442
+ ++ +S+K S ++A S + S S VV + ++ + V+
Sbjct: 146 SEIISSSSEVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSS 205
Query: 443 EETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQG 502
S S V+ S +S +SS +S +Q + SSE S + V
Sbjct: 206 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSS 265
Query: 503 EECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAP 562
E ++V+ S S++S S E + + + + +S++++ + ++S
Sbjct: 266 EVSSSSEVVSSS-SEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVV 324
Query: 563 EKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNS 622
V + +V S+ E ++ S V + ++++S + T S+ V S +
Sbjct: 325 SSSSEVSSSSEVSSSSEVVSSSSE---VSSSSEVSSSSEVSSSSQ--VTSSSEIVSSSSE 379
Query: 623 SESFGVDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNA 682
S + +SE V S V EV+S S+SQ +
Sbjct: 380 VSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVIS 439
Query: 683 LKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIF 742
V + +V+ + + + + Q+ + + +
Sbjct: 440 SSEVVSSSSEVSSSSEVVSSS-SEVSSSSEVSSSSEVSSSS----QVTSSSEIVSSSSEV 494
Query: 743 TGMSAELTSVHCEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGK--QGSKEPV 800
+ S+E+ S E+ S++ +S + + SSE+++ S + VI + S E
Sbjct: 495 SSSSSEVVSSSSEVSSSSEV-VSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVS 553
Query: 801 ALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMD 860
+ + + +E S +E + + ++S + V+ + +E ++ +E+
Sbjct: 554 SSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISS--SEVVSSSSEVV 611
Query: 861 VDRGNVEVAEEASCS--VNHGFGTSSQTDVASA-EVCNQPTGDKTNTVDASLLVDTVCLT 917
V + E S S V+ SS ++V+S+ +V + +++ +S + V +
Sbjct: 612 SSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSS 671
Query: 918 PEPTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIEN--IVAVETEAKGTDGVLVEEGKV 975
E + ++ V + V+ + + I + +V+ +E + + +V
Sbjct: 672 SEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEV 731
Query: 976 GVS--VENGADVETDRSVLTDA-VNTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLA 1032
S V + ++V + V + + V + + + +++ +++ +S + + +
Sbjct: 732 SSSSEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEII 791
Query: 1033 GDWGSNGKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLDDGKSQV 1078
S+ K +S+ + S I ST+ V + VS S+V
Sbjct: 792 S---SSSKVSSSSEITSSSECISSTSEVNSSSSEV-VSSSSASSEV 833
Score = 135 (52.6 bits), Expect = 0.00013, P = 0.00013
Identities = 147/857 (17%), Positives = 327/857 (38%)
Query: 193 SDADPQGSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTPG 252
S+ S ++ E + SE ++ SE + ++ ++ E V +E +E S+
Sbjct: 251 SEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSE-VSSSSEVSSSSEVSSSSQ 309
Query: 253 LVQEPNL-SSGQKALASYDHFESEDQ--NSNELMATESRVNDLSNSDCHNGDGHTADWPL 309
++ + SS + ++S S + +S+E++++ S V+ S+S+ + ++ +
Sbjct: 310 VISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVVSSSSEVS--SSSEVSSSSEVSSSSQV 367
Query: 310 HKDSNHDTVQCMLPEKNGYHVRDAA-VKQAESLGMLSGE---SQQVNSDKTAASLNCTNV 365
S + + + V ++ V + + S E S +V+S +S + +
Sbjct: 368 TSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSS 427
Query: 366 TCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNA-AGSGSLVVVDADI 424
+ ++ + SE + S+ + + +EVS ++ S S V ++I
Sbjct: 428 SSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEI 487
Query: 425 HACPDAKDPKMLNIDVAHEETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVD 484
+ + + E +S S V+ S +S +SS +S +Q + +
Sbjct: 488 VSSSSEVSSSSSEVVSSSSEVSSSS-EVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIV 546
Query: 485 LHSSERSKMNQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATAS 544
SSE S + V E ++V+ S S V + + + +S
Sbjct: 547 SSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSS 606
Query: 545 NNELKKLNNSITS--DLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNK- 601
++E+ ++ ++S ++ + ++ S E + + T E+++ S V + +
Sbjct: 607 SSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSE 666
Query: 602 -LNSGKKRSYTESTITVES--LNSSESFGVDRTKRNSEFIPXXXXXXXXI-LVGRKSSVL 657
++S + S + ++ S +SSE +S+ I +V S V
Sbjct: 667 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVS 726
Query: 658 KMKPTPPVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKA 717
EV+S S+S+ ++ +V + ++ ++T++ ++ +A
Sbjct: 727 SSSEVSSSSEVSSSSEVSSSSEVSS-SSEVTSSSSEIISSSS-SSEVTSSSEVSS-SSQA 783
Query: 718 PCTGPEILMIQMQFLED-DIFNEPIFTGMSAELTSVHCEIHDLSKISI----SETDKDHG 772
+ EI+ + +I + ++E+ S E+ S S S T+
Sbjct: 784 TSSSSEIISSSSKVSSSSEITSSSECISSTSEVNSSSSEVVSSSSASSEVVSSSTECISS 843
Query: 773 SSEI---ANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGA 829
SSE ++ + S + + S V ++ +ET I ++ + +
Sbjct: 844 SSEAISSSSQVTSSSTECISSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSEQISSS 903
Query: 830 QNTDAQGHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCSVNHGFGTSSQTDVA 889
++T + S + ++ +E V + +E +C +HG S+T
Sbjct: 904 ESTSSCSEFVSKSSEHSSLSSESCPSEETSTVSETS---SETVTCK-HHG---CSKTKTH 956
Query: 890 SAEVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAKMDNAKGVEDTEVID 949
+ PT T T++ S+ V T C T + V V T+ + + T VI+
Sbjct: 957 HST----PTKCVTKTIETSVYV-TTCPDKSITTETAVVIVVTNESTATTYTEIIKTTVIE 1011
Query: 950 RNI--ENIVAVETEAKGTDGVLVEEGKV-GVSVENGADVETDRSVLTDAVNTQEGVSLET 1006
N NI E + + ++E + ++ NG + + + V+
Sbjct: 1012 GNTLTTNIPIKHVETETAE--IIEYTTICPTTLPNGHETTVTAGIAIGTNGQGQKVTKTV 1069
Query: 1007 G-GYNDLAAANGDNSRL 1022
YN+ ANG +R+
Sbjct: 1070 PLEYNESTLANGHVTRV 1086
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 173 (66.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 138/826 (16%), Positives = 308/826 (37%)
Query: 272 FESEDQNSNELMATESRVNDLSN-SDCHNGDGHTADWPLHKDSNHDTVQCMLPEKNG--- 327
F +D S E E + S C+ GD + +C + N
Sbjct: 28 FGQDDSLSIEKRTNEYTTPEYGGTSHCNGGDKNCYPQCFDHRGQPKKDKCCFDKHNKVLY 87
Query: 328 -YHVRDAAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMPVS 386
Y ++ + S + S S+ ++S AS + +T + + S+ + S
Sbjct: 88 PYPCTSSSSSSSSSSTVSSSSSEVISSSSEEAS--SSEITSSSEISSSSEVSSSSEVLSS 145
Query: 387 EDRLAD----YQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAH 442
+ ++ +S+K S ++A S + S S VV + ++ + V+
Sbjct: 146 SEIISSSSEVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSS 205
Query: 443 EETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQG 502
S S V+ S +S +SS +S +Q + SSE S + V
Sbjct: 206 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSS 265
Query: 503 EECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAP 562
E ++V+ S S++S S E + + + + +S++++ + ++S
Sbjct: 266 EVSSSSEVVSSS-SEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVV 324
Query: 563 EKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNS 622
V + +V S+ E ++ S V + ++++S + T S+ V S +
Sbjct: 325 SSSSEVSSSSEVSSSSEVVSSSSE---VSSSSEVSSSSEVSSSSQ--VTSSSEIVSSSSE 379
Query: 623 SESFGVDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNA 682
S + +SE V S V EV+S S+SQ +
Sbjct: 380 VSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVIS 439
Query: 683 LKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIF 742
V + +V+ + + + + Q+ + + +
Sbjct: 440 SSEVVSSSSEVSSSSEVVSSS-SEVSSSSEVSSSSEVSSSS----QVTSSSEIVSSSSEV 494
Query: 743 TGMSAELTSVHCEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGK--QGSKEPV 800
+ S+E+ S E+ S++ +S + + SSE+++ S + VI + S E
Sbjct: 495 SSSSSEVVSSSSEVSSSSEV-VSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVS 553
Query: 801 ALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMD 860
+ + + +E S +E + + ++S + V+ + +E ++ +E+
Sbjct: 554 SSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISS--SEVVSSSSEVV 611
Query: 861 VDRGNVEVAEEASCS--VNHGFGTSSQTDVASA-EVCNQPTGDKTNTVDASLLVDTVCLT 917
V + E S S V+ SS ++V+S+ +V + +++ +S + V +
Sbjct: 612 SSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSS 671
Query: 918 PEPTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIEN--IVAVETEAKGTDGVLVEEGKV 975
E + ++ V + V+ + + I + +V+ +E + + +V
Sbjct: 672 SEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEV 731
Query: 976 GVS--VENGADVETDRSVLTDA-VNTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLA 1032
S V + ++V + V + + V + + + +++ +++ +S + + +
Sbjct: 732 SSSSEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEII 791
Query: 1033 GDWGSNGKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLDDGKSQV 1078
S+ K +S+ + S I ST+ V + VS S+V
Sbjct: 792 S---SSSKVSSSSEITSSSECISSTSEVNSSSSEV-VSSSSASSEV 833
Score = 135 (52.6 bits), Expect = 0.00013, P = 0.00013
Identities = 147/857 (17%), Positives = 327/857 (38%)
Query: 193 SDADPQGSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTPG 252
S+ S ++ E + SE ++ SE + ++ ++ E V +E +E S+
Sbjct: 251 SEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSE-VSSSSEVSSSSEVSSSSQ 309
Query: 253 LVQEPNL-SSGQKALASYDHFESEDQ--NSNELMATESRVNDLSNSDCHNGDGHTADWPL 309
++ + SS + ++S S + +S+E++++ S V+ S+S+ + ++ +
Sbjct: 310 VISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVVSSSSEVS--SSSEVSSSSEVSSSSQV 367
Query: 310 HKDSNHDTVQCMLPEKNGYHVRDAA-VKQAESLGMLSGE---SQQVNSDKTAASLNCTNV 365
S + + + V ++ V + + S E S +V+S +S + +
Sbjct: 368 TSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSS 427
Query: 366 TCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNA-AGSGSLVVVDADI 424
+ ++ + SE + S+ + + +EVS ++ S S V ++I
Sbjct: 428 SSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEI 487
Query: 425 HACPDAKDPKMLNIDVAHEETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVD 484
+ + + E +S S V+ S +S +SS +S +Q + +
Sbjct: 488 VSSSSEVSSSSSEVVSSSSEVSSSS-EVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIV 546
Query: 485 LHSSERSKMNQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATAS 544
SSE S + V E ++V+ S S V + + + +S
Sbjct: 547 SSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSS 606
Query: 545 NNELKKLNNSITS--DLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNK- 601
++E+ ++ ++S ++ + ++ S E + + T E+++ S V + +
Sbjct: 607 SSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSE 666
Query: 602 -LNSGKKRSYTESTITVES--LNSSESFGVDRTKRNSEFIPXXXXXXXXI-LVGRKSSVL 657
++S + S + ++ S +SSE +S+ I +V S V
Sbjct: 667 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVS 726
Query: 658 KMKPTPPVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKA 717
EV+S S+S+ ++ +V + ++ ++T++ ++ +A
Sbjct: 727 SSSEVSSSSEVSSSSEVSSSSEVSS-SSEVTSSSSEIISSSS-SSEVTSSSEVSS-SSQA 783
Query: 718 PCTGPEILMIQMQFLED-DIFNEPIFTGMSAELTSVHCEIHDLSKISI----SETDKDHG 772
+ EI+ + +I + ++E+ S E+ S S S T+
Sbjct: 784 TSSSSEIISSSSKVSSSSEITSSSECISSTSEVNSSSSEVVSSSSASSEVVSSSTECISS 843
Query: 773 SSEI---ANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGA 829
SSE ++ + S + + S V ++ +ET I ++ + +
Sbjct: 844 SSEAISSSSQVTSSSTECISSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSEQISSS 903
Query: 830 QNTDAQGHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCSVNHGFGTSSQTDVA 889
++T + S + ++ +E V + +E +C +HG S+T
Sbjct: 904 ESTSSCSEFVSKSSEHSSLSSESCPSEETSTVSETS---SETVTCK-HHG---CSKTKTH 956
Query: 890 SAEVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAKMDNAKGVEDTEVID 949
+ PT T T++ S+ V T C T + V V T+ + + T VI+
Sbjct: 957 HST----PTKCVTKTIETSVYV-TTCPDKSITTETAVVIVVTNESTATTYTEIIKTTVIE 1011
Query: 950 RNI--ENIVAVETEAKGTDGVLVEEGKV-GVSVENGADVETDRSVLTDAVNTQEGVSLET 1006
N NI E + + ++E + ++ NG + + + V+
Sbjct: 1012 GNTLTTNIPIKHVETETAE--IIEYTTICPTTLPNGHETTVTAGIAIGTNGQGQKVTKTV 1069
Query: 1007 G-GYNDLAAANGDNSRL 1022
YN+ ANG +R+
Sbjct: 1070 PLEYNESTLANGHVTRV 1086
>CGD|CAL0000863 [details] [associations]
symbol:MCD1 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
CGD:CAL0000863 EMBL:AACQ01000032 GO:GO:0000228 eggNOG:NOG249424
KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093 RefSeq:XP_719394.1
ProteinModelPortal:Q5ACK9 STRING:Q5ACK9 GeneID:3639044
KEGG:cal:CaO19.7634 Uniprot:Q5ACK9
Length = 564
Score = 131 (51.2 bits), Expect = 1.6e-07, Sum P(5) = 1.6e-07
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 30 NQVADTDIGVSVD--SILFPDVPIALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQ 87
N T++ VS + S L I LRLS LLLG+VRIYSRK YL DD ++ L K+K
Sbjct: 45 NHPVITNVSVSQELPSDLDSTNTITLRLSGQLLLGIVRIYSRKTEYLLDDVNDILYKLKA 104
Query: 88 AFR-STAVDL 96
+F+ S+ V+L
Sbjct: 105 SFKLSSGVNL 114
Score = 60 (26.2 bits), Expect = 1.6e-07, Sum P(5) = 1.6e-07
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 1168 TRKEASRMFFETLVLKTKDYIHVEQ 1192
+RKEA++ FFE LVL T + I + Q
Sbjct: 516 SRKEATKCFFELLVLATNNCISLGQ 540
Score = 53 (23.7 bits), Expect = 1.6e-07, Sum P(5) = 1.6e-07
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 93 AVDLP--PEESTAPYHSITLPETFDLD-DFELPD-NDIFQGNYVDHHVSTREQITLQD 146
+++ P EE+ AP H+ E F+LD D L D N I G ++ RE + D
Sbjct: 190 SIEFPRYEEEAAAPGHT----EDFELDFDLNLDDDNSIEYGRDASVSINDREISIISD 243
Score = 50 (22.7 bits), Expect = 3.1e-07, Sum P(5) = 3.1e-07
Identities = 34/170 (20%), Positives = 72/170 (42%)
Query: 210 DNISERMNEISEERTVNDGANQL---ERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKAL 266
DNIS ++N + E+T+ N + ++V A ++ + + + + SG +
Sbjct: 117 DNISNQVN-LPREQTILQNLNSIILKDQV-TSANLLQQDDLDLSD--IHGTSTGSGLDGM 172
Query: 267 ASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKDSNHDTVQCMLPEKN 326
+++ Q+S+E ++ + + GHT D+ L D N D + +
Sbjct: 173 LNHN----ASQSSSEYSEYDNSIEFPRYEEEAAAPGHTEDFELDFDLNLDD------DNS 222
Query: 327 GYHVRDAAVK-QAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPE 375
+ RDA+V + ++S V+ ++T + N + DLN +
Sbjct: 223 IEYGRDASVSINDREISIIS----DVHKERTTGDIFDLNFGQPLDDLNDD 268
Score = 48 (22.0 bits), Expect = 1.6e-07, Sum P(5) = 1.6e-07
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 664 PVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAP 718
P R R R Q RK+++D + G I+Q N E I + AP
Sbjct: 295 PRRVRQKRTRITEDGQIITNNRKLVVDSEEAMEGLAIQQLKDNQEKILSGQDSAP 349
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 482 GVDLHSSERSKMNQASVDVQGEECYLTDVMQSE-KSQISGPSVCG----DIQEDNGT--- 533
GV+L S S NQ V++ E+ L ++ K Q++ ++ D+ + +GT
Sbjct: 111 GVNLGSDNIS--NQ--VNLPREQTILQNLNSIILKDQVTSANLLQQDDLDLSDIHGTSTG 166
Query: 534 --LDEPLD-NATASNNELKKLNNSITSDLPAPEKLLSVP 569
LD L+ NA+ S++E + +NSI + P E+ + P
Sbjct: 167 SGLDGMLNHNASQSSSEYSEYDNSI--EFPRYEEEAAAP 203
Score = 43 (20.2 bits), Expect = 5.4e-07, Sum P(4) = 5.4e-07
Identities = 15/84 (17%), Positives = 39/84 (46%)
Query: 937 DNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSVENGADVETDRSVLTDAV 996
D A+ ED ++ + + E++ + V + + ++ E+G + +R ++ D+
Sbjct: 268 DEAENEEDRQLPSNSEHQERSAESDLQPRR---VRQKRTRIT-EDGQIITNNRKLVVDSE 323
Query: 997 NTQEGVSLETGGYNDLAAANGDNS 1020
EG++++ N +G +S
Sbjct: 324 EAMEGLAIQQLKDNQEKILSGQDS 347
Score = 38 (18.4 bits), Expect = 1.6e-07, Sum P(5) = 1.6e-07
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 941 GVEDTEVIDRNIENIV--AVETEAKGTDGVLVEEGKVGVSVENGADVETDRSV 991
G+ D EV + + N A TE G + L+E K +VE +ETD +
Sbjct: 444 GILDDEVDEEDDTNYTHTARVTEQIGQE--LIELFKSSNTVEFEKLIETDSEI 494
>SGD|S000002161 [details] [associations]
symbol:MCD1 "Essential alpha-kleisin subunit of the cohesin
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0034087 "establishment of mitotic
sister chromatid cohesion" evidence=IMP] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0034990 "nuclear mitotic cohesin complex" evidence=IDA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
SGD:S000002161 GO:GO:0005739 GO:GO:0006915 GO:GO:0000775
GO:GO:0051301 EMBL:BK006938 GO:GO:0003682 GO:GO:0006302
GO:GO:0034087 GO:GO:0007076 EMBL:Z48432 GO:GO:0006473 EMBL:Z48008
eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
OrthoDB:EOG4C2MKJ EMBL:Y14280 EMBL:U23759 EMBL:Z74051 PIR:S50979
RefSeq:NP_010281.1 PDB:1W1W PDBsum:1W1W ProteinModelPortal:Q12158
SMR:Q12158 DIP:DIP-5812N IntAct:Q12158 MINT:MINT-627334
STRING:Q12158 PaxDb:Q12158 PeptideAtlas:Q12158 EnsemblFungi:YDL003W
GeneID:851561 KEGG:sce:YDL003W CYGD:YDL003w HOGENOM:HOG000141751
EvolutionaryTrace:Q12158 NextBio:968995 PMAP-CutDB:Q12158
Genevestigator:Q12158 GermOnline:YDL003W GO:GO:0034990
Uniprot:Q12158
Length = 566
Score = 114 (45.2 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 30/95 (31%), Positives = 46/95 (48%)
Query: 7 ILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSIL----FPDVP-----IALRLSS 57
+ KGPL IW+A+++ + + V T I S I D I LR S
Sbjct: 14 LATNKGPLAQIWLASNMSN-IPRGSVIQTHIAESAKEIAKASGCDDESGDNEYITLRTSG 72
Query: 58 HLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRST 92
LL G+VR+YS++ +L D + L KI F+++
Sbjct: 73 ELLQGIVRVYSKQATFLLTDIKDTLTKISMLFKTS 107
Score = 70 (29.7 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 52/234 (22%), Positives = 95/234 (40%)
Query: 507 LTDVMQSEKSQISGPSVCGDIQEDNGT-LDEPLDNAT--ASNNELKK-LNNSITSDLPA- 561
+TD M + + +G + +DE +N+ AS+N K+ +N++ + P
Sbjct: 300 ITDAMTESQPKQTGTRRNSKLLNTKSIQIDEETENSESIASSNTYKEERSNNLLTPQPTN 359
Query: 562 --PEKLLS-VPEGLLNKP-----NDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTES 613
++L S + E + P N L ES ++++ G G +LN + T+
Sbjct: 360 FTTKRLWSEITESMSYLPDPILKNFLSYESLKKRKIHNGREGSIEEPELNVSL--NLTDD 417
Query: 614 TITVESLNSSESFGVDRTKRNSEFIPXXXXXXXX------ILVGRKSSVLKMKPTPPVRE 667
I+ N + SF + T S+F+P I+ + + T VR
Sbjct: 418 VISNAGTNDN-SFN-ELTDNMSDFVPIDAGLNEAPFPEENIIDAKTRNEQTTIQTEKVRP 475
Query: 668 VASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTG 721
+++ Q + RK L ++ V+ DV++ Q NTE I K+ G
Sbjct: 476 TPGEVASKAIVQMAKILRKELSEEKEVIFTDVLKSQ-ANTEP-ENITKREASRG 527
Score = 66 (28.3 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 1168 TRKEASRMFFETLVLKTKDYIHVEQARPLDNINI--KP 1203
T++EASR FF+ L L T+ I + Q NI I KP
Sbjct: 520 TKREASRGFFDILSLATEGCIGLSQTEAFGNIKIDAKP 557
Score = 39 (18.8 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 384 PVSEDRLADYQASNKKKSHNDAEVS 408
P+ ++ L+ Y++ K+K HN E S
Sbjct: 379 PILKNFLS-YESLKKRKIHNGREGS 402
>SGD|S000001912 [details] [associations]
symbol:YFR016C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0045454 "cell redox
homeostasis" evidence=IEA] [GO:0015035 "protein disulfide
oxidoreductase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0005933 "cellular bud"
evidence=IDA] InterPro:IPR002109 PROSITE:PS51354 SGD:S000001912
GO:GO:0005737 GO:GO:0009055 EMBL:D50617 EMBL:BK006940
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
eggNOG:NOG12793 GO:GO:0045454 GO:GO:0015035
GeneTree:ENSGT00550000074593 GO:GO:0005933 PIR:S56271
RefSeq:NP_116671.1 ProteinModelPortal:P43597 SMR:P43597
DIP:DIP-4195N IntAct:P43597 MINT:MINT-482664 STRING:P43597
PaxDb:P43597 PeptideAtlas:P43597 EnsemblFungi:YFR016C GeneID:850570
KEGG:sce:YFR016C CYGD:YFR016c OMA:ETHEDTE OrthoDB:EOG4CRQ8M
NextBio:966384 Genevestigator:P43597 GermOnline:YFR016C
Uniprot:P43597
Length = 1233
Score = 153 (58.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 169/775 (21%), Positives = 304/775 (39%)
Query: 325 KNGYHVRDAAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMP 384
KNG++ K+ ES + +GE QQ SD+ S +V Q ET G +
Sbjct: 343 KNGFNF-----KENESKHLKAGEKQQTESDRDGIS---PSVLAKNQK---ETEIGKEDH- 390
Query: 385 VSEDRLADYQASNKKKS--H-NDAEVSDNAAGSGSLVVVDADIHACPD-AKDP-KMLNID 439
V E + + + K+ S H N+ + NAAGS S++ + + D P K ++ +
Sbjct: 391 VFEQKDKEDEKCRKELSVNHENNMSHNFNAAGSDSIIPPETERETYDDETMGPTKRISDN 450
Query: 440 VAHEE--TASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQAS 497
+ + T +S+ V K + S+ +N+ + ++E S + S
Sbjct: 451 EKNLQHGTNDISVEVEKEEEEEEEEEENST--FSKVKKENVTGEQEAVRNNEVSGTEEES 508
Query: 498 VDVQGEECYLTDVMQSE---KS---QISGPSVCGDIQEDNGTLDEPLDNATASNNELKKL 551
+GEE D QSE KS +I G + I +DN L++ + T N + +
Sbjct: 509 TS-KGEEIMGGDEKQSEAGEKSSIIEIEGSANSAKISKDNLVLEDEAEAPTQENKPTEVV 567
Query: 552 NNSITSDLP-APEKLLSVPEGLLNK--PNDL-IVESTPEKEVLAGSGGVDAGNKLNSGKK 607
D+P AP + + E + P DL + + E E + V A + K
Sbjct: 568 GEI---DIPDAPRDDVEIVEAVEKNIIPEDLEVAKEDQEGEQVKLDEPVKA---MKDDKI 621
Query: 608 RSYTESTITVESLNSSESFG-VDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVR 666
+I+ + E + K E + V KS K +P V
Sbjct: 622 AMRGAESISEDMKKKQEGTAELSNEKAKKEVDETARESAEGVEV-EKS---KTPESPKVV 677
Query: 667 EVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILM 726
+ + R Q N +VL +D V DV + T E+ K+ +I
Sbjct: 678 KRCTSGRPEDL-QINERDPEVLKEDVRVPDEDVKPEIATTIENSEEEDPKSQRV--QIST 734
Query: 727 IQMQFLEDDIFNEPIFTGMSAELTSVHCEI-HDLSKISISETDKDHG-----SSEI--AN 778
Q + + D+ + T E EI + KI+ +T+ +HG +SE A+
Sbjct: 735 EQAETTQKDMGDVGSTTSFKEEEKPKRFEITQEGDKITGKDTNHEHGEATEAASENSKAS 794
Query: 779 DIGCS---IAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGI-DHQFGAQNTDA 834
D+G + I P+ E K+ ++E + N+ T+ + + E+ + + A+
Sbjct: 795 DVGTAEKYIEPSS-ESVKKDTEEDAEVENSEKTEFIKVKAELENLDAPKEAEVTAELNKE 853
Query: 835 QGHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCSVNHGFGTSSQTDVASAEVC 894
+ DT+ V+N E ++ + GN++ +EA + DV A
Sbjct: 854 NEDVEVDTEEDAEVENSEKTEFIKVKAELGNLDAPKEAEVTAELN---KENEDVEVAATS 910
Query: 895 NQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAK-MDNAKGVEDTEVI--DRN 951
+ K + + + D C E V + E T + M+N+K E + + D+
Sbjct: 911 KEDIETKCSEPAETPIEDGTCTEAE--VSKKDAEAVTKEDENMENSKIAEALKDVTGDQE 968
Query: 952 IENIVAVETEAKGTDGVLVEEGKVGVSVENGADVE-----TDRSV-LTDAVNTQEGVSLE 1005
I++I + E + T L E K + G D E T++ L D V +E ++ E
Sbjct: 969 IDDI-NISDEFQRTVE-LPELEKQDIKDNKGEDKELEVEETEKETSLPDLV-VEENITEE 1025
Query: 1006 TGGYNDLAAANGDNSRLEVRNEDGPLAGDWGSNGKDPTSNHMFSEEPVIDSTNSV 1060
N++ + S+L+ NE ++ + +N ++ + E P S + +
Sbjct: 1026 K---NEIKQEEEEVSQLDF-NETESISKEAPNNDENGFEDQSTRENPKKASADDI 1076
>ASPGD|ASPL0000077407 [details] [associations]
symbol:AN11113 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0000939 "condensed
chromosome inner kinetochore" evidence=IEA] [GO:0030893 "meiotic
cohesin complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0045144 "meiotic sister chromatid segregation"
evidence=IEA] [GO:0030999 "linear element assembly" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=IEA] [GO:0051455 "attachment of spindle microtubules to
kinetochore involved in homologous chromosome segregation"
evidence=IEA] InterPro:IPR006910 Pfam:PF04825 EMBL:BN001303
EnsemblFungi:CADANIAT00006294 OMA:GKARPEQ Uniprot:C8V9S2
Length = 737
Score = 140 (54.3 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 14 LGTIWIAAHL-----ERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLLLGVVRIYS 68
+ T+W+ A L R+L + + + D+ + + I+ P P+ALRL S+LL G+ R+YS
Sbjct: 83 VATVWLVATLGARSISRRLNRRTIQNVDVPKACNVIIDPAAPMALRLQSNLLYGISRVYS 142
Query: 69 RKVNYLFDDCSEALLKIKQAFRST-AVDLPPEESTAPYHSITLPETFDLDDFELPDNDI 126
++ Y D K++Q RS A L P A + LP +D F LP+N++
Sbjct: 143 QQCGYTLLDVQAMHDKMRQTLRSVPAGGLDPSAGKARPEQLVLP--YD-PSF-LPENNL 197
Score = 54 (24.1 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 43/184 (23%), Positives = 73/184 (39%)
Query: 776 IANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQ 835
I N+ + P V G + +EPV + +G T P + D Q +N +
Sbjct: 328 ITNEPARPVRPAVFCDGDEAPREPVEIETHGATAPQRQ--RGPKFLASDLQTALRNAELA 385
Query: 836 GHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCSVNH-GFGTSSQTDVASAEVC 894
+N D + N LA + +R + + A+ V G G S V S+ V
Sbjct: 386 A-MNEDY-----MHNVALAARQKRQ-NRVSTQAKRNAAYWVFRLGIG-SVGAGVGSSRVI 437
Query: 895 NQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSV-AKMDNAKG----VEDTEVID 949
+ P + L +T+ P D +P G V A+ D+ +G V+DT + +
Sbjct: 438 H-PL----HFFSGDELYETLVSHKRPLED-EPEAEGRRVRAREDDEQGRMDIVDDTNLWN 491
Query: 950 RNIE 953
++E
Sbjct: 492 EDVE 495
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 827 FGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVA 869
+ N GH + D D ++ + N M D N +VA
Sbjct: 585 YDLDNLSIPGHYDDDLDKLEGFDLGNYLDENVMGDDNSNADVA 627
>FB|FBgn0036203 [details] [associations]
symbol:Muc68D "Mucin 68D" species:7227 "Drosophila
melanogaster" [GO:0016490 "structural constituent of peritrophic
membrane" evidence=ISS] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=ISM] [GO:0005201 "extracellular
matrix structural constituent" evidence=ISM] InterPro:IPR002557
Pfam:PF01607 PROSITE:PS50940 SMART:SM00494 GO:GO:0005576
EMBL:AE014296 eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061
GO:GO:0005201 CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625
GO:GO:0006030 GeneTree:ENSGT00700000104174 EMBL:AY075323
RefSeq:NP_648504.2 UniGene:Dm.20068 SMR:Q9VTN2 MINT:MINT-900668
STRING:Q9VTN2 EnsemblMetazoa:FBtr0076119 GeneID:39326
KEGG:dme:Dmel_CG6004 UCSC:CG6004-RB CTD:39326 FlyBase:FBgn0036203
InParanoid:Q9VTN2 OMA:STESSQD OrthoDB:EOG4WSTSF GenomeRNAi:39326
NextBio:813085 Uniprot:Q9VTN2
Length = 1514
Score = 143 (55.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 158/873 (18%), Positives = 315/873 (36%)
Query: 218 EISEERTVNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYD---HFES 274
E S++ T + ++ E L E EA + + S+ Q++ +S + ES
Sbjct: 398 ESSQDSTTQESSSSTEGP-LSTE--SSTEATNESSSTESSQDSTTQESSSSTEGPLSTES 454
Query: 275 EDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKDSNHD-TVQCMLPEKNGYHVRDA 333
+ +NE +TES + + + +G PL +S+ + T + E + +D+
Sbjct: 455 STEATNESSSTESSQDSTTQESSSSTEG-----PLSTESSTEATNESSSTESS----QDS 505
Query: 334 AVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMPVSEDRLADY 393
+++ S S E T A+ N ++ T QD + ST P+S + +
Sbjct: 506 TTQESSS----SSEGPLSTESSTEAT-NESSSTESSQDSTTQESSSSTESPLSTEPSTEA 560
Query: 394 QASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAHEETASVSINVL 453
S+ +S D+ ++++ + + ++ A ++ + E ++S
Sbjct: 561 NESSSTESSQDSTTQESSSSTEDPLSTESSTEATNESSSTESSQDSTTQESSSSTE---- 616
Query: 454 KPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQS 513
P S +S + +++S ++ Q SS + E T+ Q
Sbjct: 617 GPLSTESS----TEGSNESSSTESSQDSTTQKSSSSTESPLSTEPSTEANESSSTESSQD 672
Query: 514 EKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEKLLSVPEGLL 573
+Q S S G + + T + ++T S+ + +S +S+ P + S E
Sbjct: 673 STTQESSSSTEGPLSTEPST-EANESSSTESSQDSTTQESSSSSEGPLSTE--SSTEANE 729
Query: 574 NKPNDLIVESTPEKEVLAGSG--GVDAGNKLNSGKKRSYTESTITVESLNSSESFGVDRT 631
+ + +ST ++ + + + N ++ + T ES +S+E G T
Sbjct: 730 SSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTE--GPLST 787
Query: 632 KRNSEFIPXXXXXXXXILVGRKSSVLKMKP--TPPVREVASRKRARSASQTNALKRKVLM 689
+ ++E ++SS P T E S+ + +
Sbjct: 788 EPSTEANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQESSSST 847
Query: 690 DDTMVLHGDV-IRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIFTGMSAE 748
+D + + ++TE + + + E + E NE T S +
Sbjct: 848 EDPLSTESSTEATYESSSTESSQDSTTQESSSSTEGPLSTESSTEGS--NESSSTESSQD 905
Query: 749 LTSVHCEIHDLSKISIS-ETDKDHGSS-EIANDIGCSIAPNVIEG--GKQGS---KEPVA 801
T+ S +S T+ + SS E + D + + EG + S E +
Sbjct: 906 STTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTEANESSS 965
Query: 802 LRNNGDTQPAETSIQTE-------SHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLA 854
++ D+ E+S TE S +G + +++ S + + EP
Sbjct: 966 TESSQDSTTQESSSSTEGPLSTESSTEGSNESSSTESSQDSTTQESSSSTESPLSTEPST 1025
Query: 855 ELNEMDVDRGNVE-VAEEASCSVNHGFGTSSQTDVASAEVCNQPTGDKTNTVDASLLVDT 913
E NE + + +E+S S T S T+ ++ + + D T T ++S +
Sbjct: 1026 EANESSSTESSQDSTTQESSSSTEGPLSTESSTEASNESSSTESSQDST-TQESSSSTEG 1084
Query: 914 VCLTPEPT-VDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEE 972
T T V +P + + N+ T+ +N ++E + T G +
Sbjct: 1085 PLSTESSTEVTQEP----SPTESLPNSS----TQGTPCTTDNPSSLEP-SPSTPGNDDDS 1135
Query: 973 GKVGVSVENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANGDNSRLEVRNE----D 1028
G G ENG + TD + E S G +D + +N D
Sbjct: 1136 GNSGS--ENGNSSTSGSPCTTDNPSDPESSSSTPGNDDDSGNSGSENGNSSTSGSPCTTD 1193
Query: 1029 GPLAGDWGSN--GKDPTSNHMFSEEPVIDSTNS 1059
P + S+ G D S + SE + +T +
Sbjct: 1194 NPSDPESSSSTPGNDDDSGNSGSESGITSTTGA 1226
Score = 134 (52.2 bits), Expect = 0.00019, P = 0.00019
Identities = 160/926 (17%), Positives = 341/926 (36%)
Query: 203 PTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTP-GLVQEPNLSS 261
P H++ N + + +S++ + + D+ P E A ST Q P +S
Sbjct: 130 PIAHFQFINSAVGIEPLSQDNLADKDKKDIISSSSDSSPTEDATYSSTQVSSTQVPEDAS 189
Query: 262 GQKALASYDHFESEDQNSNEL-MATESRVND--LSNSDCHNGDGHTADWPLHKDSNHDTV 318
+++ + ++S ++ ++TE+ ++D LS+ + T + + ++
Sbjct: 190 SAESIQ--ESTTQGSRSSTDISLSTEASLDDIILSSESIVPTESSTTIISSSTEGSWES- 246
Query: 319 QCMLPEKNGYHVRDAAVKQAESLGMLSGESQQ--VNSDKTAASLNCTNVTCDMQDLNPET 376
G V ++ SL S S + V+++ + + + ++ T + D E+
Sbjct: 247 HISTDSSIGSKVESLLIEALYSLIQESSSSSESPVSNEPSTGATDDSSSTESLPDSTQES 306
Query: 377 CPGSTNMPVSEDRLADY-QASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKM 435
S+ PVS + + S+ +S ++ D+++ + + ++ A ++ +
Sbjct: 307 S-SSSESPVSFELSTEATNESSSSESLPNSSTQDSSSSTETSFQTESTTDATDESSSTES 365
Query: 436 LNIDVAHEETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQ 495
E ++S + S +D S+ +S Q S+E +
Sbjct: 366 QPDSTTQESSSSTEGPLSTESSTAVTDQSSSTESSQDSTTQESSS------STEGPLSTE 419
Query: 496 ASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSI 555
+S + E T+ Q +Q S S G + ++ T E + ++++ +
Sbjct: 420 SSTEATNESSS-TESSQDSTTQESSSSTEGPLSTESST--EATNESSSTESSQDSTTQES 476
Query: 556 TSDLPAPEKLLSVPEGLLNKPN-DLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTEST 614
+S P S E + + +ST ++ + G + + + + S TES+
Sbjct: 477 SSSTEGPLSTESSTEATNESSSTESSQDSTTQESSSSSEGPLSTESSTEATNESSSTESS 536
Query: 615 ---ITVESLNSSESFGVDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASR 671
T ES +S+ES T+ ++E ++SS P+ +S
Sbjct: 537 QDSTTQESSSSTES--PLSTEPSTEANESSSTESSQDSTTQESS---SSTEDPLSTESST 591
Query: 672 KRARSASQTNALKRKVLMDDTMVLHGDVIRQQLT-------NTEDIRRIRKKAPCTGPEI 724
+ +S T + + + + G + + T +TE + + + E
Sbjct: 592 EATNESSSTESSQDSTTQESSSSTEGPLSTESSTEGSNESSSTESSQDSTTQKSSSSTES 651
Query: 725 LMIQMQFLEDDIFNEPIFTGMSAELTSVHCEIHDLSKISIS-ETDKDHGSS-EIANDIGC 782
+ E NE T S + T+ +S T+ + SS E + D
Sbjct: 652 PLSTEPSTEA---NESSSTESSQDSTTQESSSSTEGPLSTEPSTEANESSSTESSQDSTT 708
Query: 783 SIAPNVIEG--GKQGS---KEPVALRNNGDTQPAETSIQTESHQGIDHQFGA-QNTDAQG 836
+ + EG + S E + ++ D+ E+S TES + A +++ +
Sbjct: 709 QESSSSSEGPLSTESSTEANESSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTES 768
Query: 837 HINSDTDVVKT-----VQNEPLAELNEMDVDRGNVEVAEEASCSVNHG-FGTSSQTDVAS 890
+S T + + EP E NE + + + S S + G T S T+ A+
Sbjct: 769 SQDSTTQESSSSTEGPLSTEPSTEANESSSTESSQDSTTQESSSSSEGPLSTESSTE-AN 827
Query: 891 AEVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAKMDNAKGVEDTEVIDR 950
+ + D T +S D L+ E + +A E ++ + D+ T+
Sbjct: 828 ESSSTESSQDSTTQESSSSTEDP--LSTESSTEAT-YESSSTESSQDST-----TQESSS 879
Query: 951 NIENIVAVETEAKGT-DGVLVEEGKVGVSVENGADVETDRSVLTDAVNTQEGVSLETGGY 1009
+ E ++ E+ +G+ + E + + E+ + E S L+ +T+ S T
Sbjct: 880 STEGPLSTESSTEGSNESSSTESSQDSTTQESSSSTE---SPLSTEPSTEANESSSTESS 936
Query: 1010 NDLAAANGDNSRLEVRNEDGPLAGDWGSNGKDPTSNHMFSEEPVIDSTNSVELGGDTINV 1069
D +S +GPL+ + + + +S + +S++S E G +
Sbjct: 937 QDSTTQESSSST------EGPLSTESSTEANESSSTESSQDSTTQESSSSTE-GPLSTES 989
Query: 1070 SLDDGKSQVDLRSPMDDGRMEIEEVT 1095
S + S D E T
Sbjct: 990 STEGSNESSSTESSQDSTTQESSSST 1015
>MGI|MGI:1929645 [details] [associations]
symbol:Rec8 "REC8 homolog (yeast)" species:10090 "Mus
musculus" [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IDA] [GO:0000780 "condensed nuclear chromosome,
centromeric region" evidence=IDA] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0000795 "synaptonemal complex"
evidence=IDA] [GO:0000800 "lateral element" evidence=IDA]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0001673 "male
germ cell nucleus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0007126 "meiosis" evidence=IPI] [GO:0007129
"synapsis" evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007286 "spermatid development" evidence=IMP] [GO:0030893
"meiotic cohesin complex" evidence=IDA] [GO:0034991 "nuclear
meiotic cohesin complex" evidence=IDA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 MGI:MGI:1929645
GO:GO:0007059 GO:GO:0005654 GO:GO:0007286 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0001673
GO:GO:0000778 GO:GO:0001556 GO:GO:0000800 GO:GO:0007141
GO:GO:0007129 Gene3D:1.10.10.580 InterPro:IPR023093 GO:GO:0034991
CTD:9985 eggNOG:NOG248028 HOVERGEN:HBG056766 KO:K13054
OrthoDB:EOG4B5P55 EMBL:AF262055 EMBL:AK077167 EMBL:AK146832
EMBL:BC052155 IPI:IPI00311744 RefSeq:NP_064386.2 UniGene:Mm.23149
ProteinModelPortal:Q8C5S7 SMR:Q8C5S7 STRING:Q8C5S7
PhosphoSite:Q8C5S7 PRIDE:Q8C5S7 Ensembl:ENSMUST00000002395
GeneID:56739 KEGG:mmu:56739 UCSC:uc007tzo.1
GeneTree:ENSGT00390000011379 HOGENOM:HOG000154087 InParanoid:Q8C5S7
OMA:ARVFYLL NextBio:313236 Bgee:Q8C5S7 CleanEx:MM_REC8
Genevestigator:Q8C5S7 GermOnline:ENSMUSG00000002324 Uniprot:Q8C5S7
Length = 591
Score = 100 (40.3 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 35/125 (28%), Positives = 59/125 (47%)
Query: 1 MFYSQFILAKK-GPLGTIWIAAHLERKLRKNQVADTDIGVSVDSIL-------------F 46
MFY +L + G TIW+AA +L K + + ++ + + IL
Sbjct: 1 MFYYPNVLQRHTGCFATIWLAATRGSRLVKREYLNVNVVKTCEEILNYVLVRVQPPVAGL 60
Query: 47 PDVPIALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYH 106
P +L LS+ L +GV+R+Y ++ YL +D L + +A +D+ EE+ P
Sbjct: 61 PRPRFSLYLSAQLQIGVIRVYFQQCQYLVEDIQHILEHLHRAQLRIRIDM--EEADLP-- 116
Query: 107 SITLP 111
S+ LP
Sbjct: 117 SLLLP 121
Score = 82 (33.9 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 1152 VQGRKVLALDHLLVGKT-RKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAK 1206
+Q K L L+ + RK ASR+F+ LVL T+ + VEQ +P + I+PG K
Sbjct: 534 LQANKELDFSSLVPPLSPRKLASRVFYLLLVLSTQKILLVEQQKPYGPLLIRPGPK 589
Score = 49 (22.3 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 361 NCTNVTCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAG-SGSLVV 419
+C V M P+ T V E+R AD + K ++ ++ EV A SG L++
Sbjct: 409 HCAQVPQRMLRQRPQL---ETEETVEEERAADEEERRKTEALSEIEVLREAQEPSGPLML 465
Query: 420 V-DADIHACPDAK 431
+ + A D K
Sbjct: 466 SSELSLEAAEDEK 478
Score = 37 (18.1 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 214 ERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLS 260
E + EER ++ + + E + A+ PS P L+ LS
Sbjct: 425 ETEETVEEERAADEEERRKTEALSEIEVLREAQEPSGP-LMLSSELS 470
>UNIPROTKB|H0YLK4 [details] [associations]
symbol:REC8 "Meiotic recombination protein REC8 homolog"
species:9606 "Homo sapiens" [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0007129
"synapsis" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0000780
GO:GO:0007286 GO:GO:0001673 GO:GO:0001556 GO:GO:0000800
GO:GO:0007141 EMBL:AL136295 GO:GO:0007129 GO:GO:0030893
Gene3D:1.10.10.580 InterPro:IPR023093 HGNC:HGNC:16879 OMA:ARVFYLL
ProteinModelPortal:H0YLK4 SMR:H0YLK4 Ensembl:ENST00000559919
PhylomeDB:H0YLK4 Bgee:H0YLK4 Uniprot:H0YLK4
Length = 546
Score = 106 (42.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 1 MFYSQFILAKK-GPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILF----------PDV 49
MFY +L + G TIW+AA +L K + ++ + + IL P +
Sbjct: 1 MFYYPNVLQRHTGCFATIWLAATRGSRLVKREYLRVNVVKTCEEILNYVLVRVQPPQPGL 60
Query: 50 P---IALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTA--P 104
P +L LS+ L +GV+R+YS++ YL +D L ++ +A +D+ E + P
Sbjct: 61 PRPRFSLYLSAQLQIGVIRVYSQQCQYLVEDIQHILERLHRAQLQIRIDMETELPSLLLP 120
Query: 105 YHSITLPETFD 115
H + + ET +
Sbjct: 121 NH-LAMMETLE 130
Score = 77 (32.2 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 1169 RKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAK 1206
R+ A+R+F+ LVL + +HV+Q +P + I+PG +
Sbjct: 507 RRMAARVFYLLLVLSAQQILHVKQEKPYGRLLIQPGPR 544
>UNIPROTKB|O95072 [details] [associations]
symbol:REC8 "Meiotic recombination protein REC8 homolog"
species:9606 "Homo sapiens" [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0007129
"synapsis" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0005634
"nucleus" evidence=TAS] [GO:0007126 "meiosis" evidence=TAS]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0007283 "spermatogenesis" evidence=TAS] [GO:0007062 "sister
chromatid cohesion" evidence=TAS] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0005634
Reactome:REACT_115566 GO:GO:0000780 GO:GO:0007286 GO:GO:0007283
Reactome:REACT_111183 EMBL:CH471078 GO:GO:0001673 GO:GO:0001556
GO:GO:0007131 GO:GO:0000800 GO:GO:0007141 EMBL:AL136295
GO:GO:0007129 GO:GO:0007062 GO:GO:0030893 Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:AF006264 EMBL:AK001435 EMBL:AK291191
EMBL:CR457263 EMBL:AL832973 EMBL:BC004159 EMBL:BC010887
EMBL:BC019326 IPI:IPI00293487 IPI:IPI00937443 RefSeq:NP_001041670.1
RefSeq:NP_005123.2 UniGene:Hs.419259 ProteinModelPortal:O95072
SMR:O95072 STRING:O95072 PhosphoSite:O95072 PRIDE:O95072
Ensembl:ENST00000311457 GeneID:9985 KEGG:hsa:9985 UCSC:uc001wmr.3
CTD:9985 GeneCards:GC14P024641 HGNC:HGNC:16879 HPA:HPA031727
HPA:HPA031729 MIM:608193 neXtProt:NX_O95072 PharmGKB:PA162401009
eggNOG:NOG248028 HOVERGEN:HBG056766 InParanoid:O95072 KO:K13054
OrthoDB:EOG4B5P55 GenomeRNAi:9985 NextBio:37700 Bgee:O95072
CleanEx:HS_REC8 Genevestigator:O95072 GermOnline:ENSG00000100918
Uniprot:O95072
Length = 547
Score = 106 (42.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 1 MFYSQFILAKK-GPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILF----------PDV 49
MFY +L + G TIW+AA +L K + ++ + + IL P +
Sbjct: 1 MFYYPNVLQRHTGCFATIWLAATRGSRLVKREYLRVNVVKTCEEILNYVLVRVQPPQPGL 60
Query: 50 P---IALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTA--P 104
P +L LS+ L +GV+R+YS++ YL +D L ++ +A +D+ E + P
Sbjct: 61 PRPRFSLYLSAQLQIGVIRVYSQQCQYLVEDIQHILERLHRAQLQIRIDMETELPSLLLP 120
Query: 105 YHSITLPETFD 115
H + + ET +
Sbjct: 121 NH-LAMMETLE 130
Score = 77 (32.2 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 1169 RKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAK 1206
R+ A+R+F+ LVL + +HV+Q +P + I+PG +
Sbjct: 508 RRMAARVFYLLLVLSAQQILHVKQEKPYGRLLIQPGPR 545
>UNIPROTKB|Q939N5 [details] [associations]
symbol:gspB "Platelet binding protein GspB" species:1302
"Streptococcus gordonii" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00746 GO:GO:0005618 GO:GO:0005576
InterPro:IPR019948 InterPro:IPR019931 TIGRFAMs:TIGR01167
PROSITE:PS50847 EMBL:AY028381 PDB:3QC5 PDB:3QC6 PDB:4I8E
PDBsum:3QC5 PDBsum:3QC6 PDBsum:4I8E IntAct:Q939N5
InterPro:IPR022263 InterPro:IPR026465 TIGRFAMs:TIGR03715
TIGRFAMs:TIGR04224 Uniprot:Q939N5
Length = 3072
Score = 138 (53.6 bits), Expect = 0.00015, P = 0.00015
Identities = 122/687 (17%), Positives = 231/687 (33%)
Query: 333 AAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPG-STNMPVSEDRLA 391
A+V +ES + S S T+AS++ + ++ T S ++ SE
Sbjct: 2291 ASVSASESASTSASVSAS-ESASTSASVSASESASTSASVSASTSASTSASVSASESAST 2349
Query: 392 DYQASNKKKSHNDAEVS--DNAAGSGSLVVVD-ADIHACPDAKDPKMLNIDVAHEETASV 448
S+ + + A VS ++A+ S S+ + A A A + + V+ E+AS
Sbjct: 2350 SASVSSSESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESAST 2409
Query: 449 SINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLT 508
S +V S TS +S S + + S S+ S V E T
Sbjct: 2410 SASVSASTSASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESAST 2469
Query: 509 DVMQSEKSQIS-GPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEKLLS 567
S + S SV ++A+ S + + S ++ + A E S
Sbjct: 2470 SASVSASTSASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESA-S 2528
Query: 568 VPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSESFG 627
+ + S E + S V A ++ S +ES T S+++SES
Sbjct: 2529 TSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESAS 2588
Query: 628 VDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPP-----VREVASRKRARSASQTNA 682
+ SE + +SV + T E AS + SAS++ +
Sbjct: 2589 TSASVSASESASTSASVSASMSASTSASVSVSESTSTSASVSANESASTSASVSASESAS 2648
Query: 683 LKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIF 742
V ++ V + +T + A + + E + +
Sbjct: 2649 TSASVSASESASTSASVSASESASTSASVSASESASTSA------SVSASESASTSASVS 2702
Query: 743 TGMSAELT-SVHCEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVA 801
SA + SV + S+S ++ S+ ++ S + +V + V+
Sbjct: 2703 ASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVS 2762
Query: 802 LRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDV 861
+ T + ++ ++ S + +T A + +V A + V
Sbjct: 2763 ANESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSA-SV 2821
Query: 862 DRGNVEVAEEASCSVNHGFGTSSQTDVA-SAEVCNQPTGDKTNTVDASLLVDTVCLTPEP 920
+ + AS S N TS+ + SA + ++ + AS+ T
Sbjct: 2822 S-ASTSASTSASVSANESASTSASVSASESASTSASVSASESASTSASVSASESASTSAS 2880
Query: 921 TVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLV--EEGKVGVS 978
++ SV+ +A + + A +E+ T + E S
Sbjct: 2881 VSASESASTSASVSASTSASTSASVSASESASTSASASASESASTSASVSASESASTSAS 2940
Query: 979 VENGADVETDRSV-LTDAVNTQEGVSL 1004
V T SV +++ +T VS+
Sbjct: 2941 VSASESASTSASVSASESASTNASVSV 2967
Score = 132 (51.5 bits), Expect = 0.00066, P = 0.00066
Identities = 120/700 (17%), Positives = 236/700 (33%)
Query: 333 AAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNP-ETCPGSTNMPVSEDRLA 391
A+V +ES + S S T+AS++ + ++ E+ S ++ SE
Sbjct: 1745 ASVSASESASTSASVSAS-ESASTSASVSASESASTSASVSASESASTSASVSASESAST 1803
Query: 392 DYQASNKKKSHNDAEVS--DNAAGSGSLVVVD-ADIHACPDAKDPKMLNIDVAHEETASV 448
S + + A VS ++A+ S S+ + A A A + + V+ E+AS
Sbjct: 1804 SASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESAST 1863
Query: 449 SINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLT 508
S +V S TS +S S + + S S+ S V E T
Sbjct: 1864 SASVSASTSTSTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESAST 1923
Query: 509 DV-MQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEKLLS 567
+ + +S + SV ++A+ S + + S ++ + A E S
Sbjct: 1924 SASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESA-S 1982
Query: 568 VPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSESFG 627
+ + S E + S V A ++ S +ES T S+++SES
Sbjct: 1983 TSASVSASTSASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESAS 2042
Query: 628 VDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALKRKV 687
+ SE +SV + V++ + A +++ +A K
Sbjct: 2043 TSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASKSAS 2102
Query: 688 LMDDTMVLHGDVIRQQLTNTEDIRRIRK---KAPCTGPEILMIQMQFLEDDI--FNEPIF 742
+ + + + + A + E + D + +
Sbjct: 2103 TSESASTSASVSASESASTSASVSASESASTSASVSASESVSTSASVSASDSASISASVL 2162
Query: 743 TGMSAELT-SVHCEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVA 801
SA + SV + S+S ++ S+ ++ S + +V + V+
Sbjct: 2163 ASESASTSASVSASESASTSASVSASESASTSASVSASESASTSSSVSASESASTSASVS 2222
Query: 802 LRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDV 861
+ T A S T + +++ +++ ++ +E
Sbjct: 2223 ASESASTS-ASVSASTSASTSASVS-ASESASTSASVSAS----ESASTSASVSASESAS 2276
Query: 862 DRGNVEVAEEASCSVNHGFGTSSQTDVASAEVCNQPTGDKTNTVDASLLVDTVCLTPEPT 921
+V +E AS S + S+ T SA V + + +V AS T T
Sbjct: 2277 TSASVSASESASTSASVSASESAST---SASVSASESASTSASVSASESASTSASVSAST 2333
Query: 922 VDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSVEN 981
+ V S + +A V +E + ++ A E+ + E SV
Sbjct: 2334 SASTSASVSASESASTSAS-VSSSESASTSA-SVSASESASTSASVSASESASTSASVSA 2391
Query: 982 GADVETDRSV-LTDAVNTQEGVSLETGGYNDLAAANGDNS 1020
T SV +++ +T VS T + + +++
Sbjct: 2392 SESASTSASVSASESASTSASVSASTSASTSASVSASESA 2431
Score = 131 (51.2 bits), Expect = 0.00084, P = 0.00084
Identities = 123/683 (18%), Positives = 225/683 (32%)
Query: 333 AAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPG---STNMPVSEDR 389
A+V +ES + S S T+AS++ + ++ T S + S
Sbjct: 953 ASVSASESASTSASVSAS-ESASTSASVSASTSASTSASVSASTSASTSASVSASTSAST 1011
Query: 390 LADYQASNKKKSHNDAEVSDNAAGSGSLVVVD-ADIHACPDAKDPKMLNIDVAHEETASV 448
A AS + S++A+ S S+ + A A A + V+ E+AS
Sbjct: 1012 SASVSASTSASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESAST 1071
Query: 449 SINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLT 508
S +V S TS +S S + + S S+ + S V E T
Sbjct: 1072 SASVSASESASTSASESASESASTSASVSASESASTSASVSASESSSTSASVSASESSST 1131
Query: 509 DV-MQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEKLLS 567
+ + +S + SV + ++A+ S + + S ++ + A E S
Sbjct: 1132 SASVSASESASTSASVSASESASTSASESASESASTSASVSASESASTSASVSASESA-S 1190
Query: 568 VPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSESFG 627
+ + S E + S V A ++ S +ES T S+++SES
Sbjct: 1191 TSASVSASESVSTSASVSASESASTSASVSASESASTSASESASESASTSASVSASESAS 1250
Query: 628 VDRTKRNSEFIPXXXXXXXXILVGRKSSV-----LKMKPTPPVREVASRKRARSASQTNA 682
+ SE +SV + E AS + SAS++ +
Sbjct: 1251 TSASVSASESASTSASVSASTSASTSASVSASESASTSASVSASESASTSASVSASESAS 1310
Query: 683 LKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIF 742
V +++ V + +T + A + E E + +
Sbjct: 1311 TSASVSASESVSTSASVSASESASTSASVSASESASTSASESAS------ESASTSASVS 1364
Query: 743 TGMSAELT-SVHCEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVA 801
SA + SV + S+S + S+ ++ S + +V + V+
Sbjct: 1365 ASESASTSASVSASESASTSASVSASTSASTSASVSASESASTSASVSASESASTSASVS 1424
Query: 802 LRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDV 861
+ T A S T + +++ +++ T + +E
Sbjct: 1425 ASESASTS-ASVSASTSASTSASVS-ASESASTSTSVSTSTSASTSAS----VSASESAS 1478
Query: 862 DRGNVEVAEEASCSVNHGFGTSSQTDVASAEVCNQPTGDKTNTVDASLLVDTVCLTPEPT 921
+V +E AS S + TS+ T SA V + + +V AS T
Sbjct: 1479 TSASVSASESASTSASVSASTSAST---SASVSASESASTSASVSASESASTSASVSASE 1535
Query: 922 VDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSVEN 981
+ V S + +A T ++ A E+ + E SV
Sbjct: 1536 SASTSASVSASESASTSASVSASTSA--STSASVSASESASTSASVSASESASTSASVSA 1593
Query: 982 GADVETDRSV-LTDAVNTQEGVS 1003
T SV +++ +T VS
Sbjct: 1594 SESASTSASVSASESASTSASVS 1616
>UNIPROTKB|E1BL69 [details] [associations]
symbol:REC8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0034991 "nuclear meiotic cohesin complex" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007129 "synapsis" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0001556
"oocyte maturation" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0000778 "condensed nuclear chromosome
kinetochore" evidence=IEA] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 GO:GO:0000780 GO:GO:0007286 GO:GO:0001673
GO:GO:0001556 GO:GO:0000800 GO:GO:0007141 GO:GO:0007129
GO:GO:0030893 Gene3D:1.10.10.580 InterPro:IPR023093 CTD:9985
KO:K13054 GeneTree:ENSGT00390000011379 OMA:ARVFYLL
EMBL:DAAA02028032 IPI:IPI00712766 RefSeq:NP_001178217.1
UniGene:Bt.100955 Ensembl:ENSBTAT00000003504 GeneID:516291
KEGG:bta:516291 NextBio:20872182 Uniprot:E1BL69
Length = 587
Score = 108 (43.1 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 36/126 (28%), Positives = 62/126 (49%)
Query: 1 MFYSQFILAKK-GPLGTIWIAAHLERKLRKNQVADTDIGVSVDSIL----------FPDV 49
MFY +L + G TIW+AA +L K + + ++ + + IL P
Sbjct: 1 MFYYPNVLQRHTGCFATIWLAATRGCRLVKREYLNVNVVKTCEEILNYVLVRVQPPLPGA 60
Query: 50 P---IALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYH 106
P +L LS+ L +GV+R+YS++ YL +D L ++ +A +D+ E+ P
Sbjct: 61 PRPRFSLYLSAQLQIGVIRVYSQQCQYLVEDIQHILERLHRAQLQIRIDMV--ETELP-- 116
Query: 107 SITLPE 112
S+ LP+
Sbjct: 117 SLLLPD 122
Score = 72 (30.4 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 1137 RAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPL 1196
RAV++ LQ REP V L R+ A+R+F+ LVL T+ + V+Q P
Sbjct: 522 RAVARELQA--DREPDFSSLVPPLS------PRRMAARVFYLLLVLATQQILRVKQEEPY 573
Query: 1197 DNINIKPGAK 1206
+ I+PG +
Sbjct: 574 GRLLIQPGPR 583
Score = 45 (20.9 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 555 ITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLA 591
+ ++ P L VPE L P +L VE PE E+L+
Sbjct: 481 VEAEQPEAPVLPVVPE-LPEVPVELPVELPPEPELLS 516
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 223 RTVNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFE-SEDQNSN- 280
R + + + ER E AE PS +++E SG ++S E +E++ +
Sbjct: 410 RRLPEELEEAEREAAAEEERRKAETPSDIEVLREAQEPSGPLMVSSELSLEVAEEEKTRI 469
Query: 281 ELMATESR 288
L+ E R
Sbjct: 470 SLVPPEER 477
Score = 37 (18.1 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 528 QEDNGTLDEP--LDNATASNNELKKL----NNSITSDLPAPEKLLSVPEGLLNKPNDLIV 581
+ED L E L + +ELK+ IT P+P L+ V E P +++
Sbjct: 226 EEDEAILLEERRLGRTRLAVDELKEEPWAPEREITVPPPSPLALVGVEEAAEPLPREVLA 285
Query: 582 ESTPEKEV 589
+ EV
Sbjct: 286 PEELKPEV 293
>UNIPROTKB|Q9NZW4 [details] [associations]
symbol:DSPP "Dentin sialophosphoprotein" species:9606 "Homo
sapiens" [GO:0031214 "biomineral tissue development" evidence=IEA]
[GO:0071460 "cellular response to cell-matrix adhesion"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=TAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005509 "calcium ion binding"
evidence=TAS] [GO:0005518 "collagen binding" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0001503 "ossification" evidence=TAS] GO:GO:0005578
GO:GO:0005509 GO:GO:0001501 GO:GO:0005518 eggNOG:NOG12793
GO:GO:0031214 GO:GO:0001503 GO:GO:0005201 EMBL:AF163151
EMBL:AC093895 EMBL:AF094508 IPI:IPI00872967 RefSeq:NP_055023.2
UniGene:Hs.678914 ProteinModelPortal:Q9NZW4 STRING:Q9NZW4
PhosphoSite:Q9NZW4 DMDM:215273974 PaxDb:Q9NZW4 PRIDE:Q9NZW4
Ensembl:ENST00000282478 Ensembl:ENST00000399271 GeneID:1834
KEGG:hsa:1834 UCSC:uc003hqu.3 CTD:1834 GeneCards:GC04P088529
HGNC:HGNC:3054 HPA:HPA036230 MIM:125420 MIM:125485 MIM:125490
MIM:125500 MIM:605594 neXtProt:NX_Q9NZW4 Orphanet:1653
Orphanet:166260 Orphanet:166265 PharmGKB:PA27507 HOVERGEN:HBG098252
OMA:ERESKVQ OrthoDB:EOG41RPVG GenomeRNAi:1834 NextBio:7491
PMAP-CutDB:A8MUI0 ArrayExpress:Q9NZW4 Bgee:Q9NZW4 CleanEx:HS_DSPP
Genevestigator:Q9NZW4 GermOnline:ENSG00000152591 GO:GO:0071460
Uniprot:Q9NZW4
Length = 1301
Score = 131 (51.2 bits), Expect = 0.00033, P = 0.00033
Identities = 87/451 (19%), Positives = 176/451 (39%)
Query: 193 SDADPQGSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTPG 252
SD+ S + + D+ S+ + S + + N ++ ++ + +++ +
Sbjct: 620 SDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSS 679
Query: 253 LVQEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKD 312
N S + S + ES D +S+ + S +D SNS+ + D +
Sbjct: 680 SSDSSNSSDSSDSSDSSNSSESSD-SSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSS 738
Query: 313 SNHDTVQCMLPEKNGYHVRDAAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDL 372
++ D+ N D++ S S +S + ++ N ++ + D D
Sbjct: 739 NSSDSSDSS-DSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDS 797
Query: 373 -NPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAK 431
N S++ S D +D +SN S N ++ SD++ S S +D D
Sbjct: 798 SNSSDSSNSSDSSDSSDS-SDSDSSNSSDSSNSSDSSDSSNSSDS-----SDSSDSSDGS 851
Query: 432 DPKMLN-IDVAHEETASVSINVLKPC-SYHTSDPHMSSPGHDNSLAQNLQPL-GVDLHSS 488
D N D ++ +S S + S +SD + SS D+S + N D +S
Sbjct: 852 DSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNS 911
Query: 489 ERSKMNQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNEL 548
S + S D E +D S S S S D + + + D + ++++++
Sbjct: 912 SDSSDSSNSSD-SSESSNSSD--NSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDS 968
Query: 549 KKLNNSITSDLP-APEKLLSVPEGLLNKPNDLI--VESTPEKEVLAGSGGVDAGNKLNSG 605
N+S +SD + + S + +D +S+ + S D+ N +S
Sbjct: 969 SDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSS 1028
Query: 606 KKRSYTESTITVESLNSSESFGVDRTKRNSE 636
++S+ + +S +SS+S + +S+
Sbjct: 1029 NSSDSSDSSDSSDSSDSSDSSDSSDSSNSSD 1059
Score = 131 (51.2 bits), Expect = 0.00033, P = 0.00033
Identities = 83/481 (17%), Positives = 180/481 (37%)
Query: 146 DTMDGMAYSTSQFGLDERFGDGDASQMGXXXXXXXXXXKGTAAGHGVSDADPQGSVKPTT 205
D+ D + S S D S + + S +D S +
Sbjct: 632 DSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSD 691
Query: 206 HWEQDNISERMNEI-SEERTVNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQK 264
+ N SE + S + +D ++ D++ +++ + + S
Sbjct: 692 SSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSN 751
Query: 265 ALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKDSNHDTVQCMLPE 324
+ S D +S + + + + S +D SNS N +++D DS++ + +
Sbjct: 752 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSD---SSDSSNSSDSSNSSD 808
Query: 325 KNGYHVRDAAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMP 384
+ D++ + + S S +S ++ S + ++ + D D + S+N
Sbjct: 809 SSDSS--DSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSD-SSDGSDSDSSNRSDSSNSS 865
Query: 385 VSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAHEE 444
S D +S+ S + E S+++ S S D+D ++ D + E
Sbjct: 866 DSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSE 925
Query: 445 TASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEE 504
+++ S N S ++SD SS ++S + N SS+ + + + +
Sbjct: 926 SSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDS 985
Query: 505 CYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEK 564
+D S+ S S S D + + + D N++ S+N N+S +SD
Sbjct: 986 SDSSD--SSDSSDSSDSSNSSDSSDSSDSSDS--SNSSDSSNSSDSSNSSDSSDSSDSSD 1041
Query: 565 LLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSE 624
+ + + +S+ + S D+ + +S + ++S+ + +S +SS+
Sbjct: 1042 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSD 1101
Query: 625 S 625
S
Sbjct: 1102 S 1102
Score = 114 (45.2 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 78/374 (20%), Positives = 144/374 (38%)
Query: 264 KALASYDHFESEDQNSNELMATESRVNDLSNSDC-HNGD-----GHTADWPLHKDSNHDT 317
K++ D S++ N N+ +ES N S D +N D G+ +D +D + D+
Sbjct: 458 KSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDS 517
Query: 318 VQCMLPEK---NGYHVRDAAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNP 374
NG + D K G S S +SD + +S + + D D N
Sbjct: 518 TSDTNNSDSNGNGNNGNDDNDKSDSGKGK-SDSSDSDSSDSSNSSDSSDSSDSDSSDSNS 576
Query: 375 ETCPGSTNMPVSEDRLADYQ-ASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDP 433
+ S++ S+ +D +SN S + ++ SD++ S S + D+ D
Sbjct: 577 SSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDS 636
Query: 434 KMLNIDVAHEETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKM 493
+ D + ++ S N S ++S+ SS D+S + + SS+ S
Sbjct: 637 DSKS-DSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDS 695
Query: 494 NQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNN 553
+ +S + +D S S S S D N + N++ S++ N+
Sbjct: 696 SNSSESSDSSDSSDSDSSDSSDSSNSNSS---DSDSSNSSDSSDSSNSSDSSDSSDSSNS 752
Query: 554 SITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTES 613
S +SD + + + S+ + S D+ N +S ++S
Sbjct: 753 SDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDS 812
Query: 614 TITVES--LNSSES 625
+ + +S NSS+S
Sbjct: 813 SDSSDSDSSNSSDS 826
Score = 66 (28.3 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 55/330 (16%), Positives = 124/330 (37%)
Query: 758 DLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPA-ETSIQ 816
D S S S D SS+ +N S + + +G S N+ D+ + ++S
Sbjct: 819 DSSNSSDSSNSSD--SSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNS 876
Query: 817 TESHQGIDHQFGAQNTDAQGHINS-DTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCS 875
++S D + ++D+ NS D+D + + ++ + + +E ++ S
Sbjct: 877 SDSSDSSDSNESSNSSDSSDSSNSSDSD------SSDSSNSSDSSDSSNSSDSSESSNSS 930
Query: 876 VNHGFGTSSQTDVASAEVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAK 935
N SS + +S + + D +N+ D+S D+ + D+ S
Sbjct: 931 DNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSS-----NSSDS 985
Query: 936 MDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSVENGADVETDRSVLTDA 995
D++ + ++ D + N + +D + N +D +D S +D+
Sbjct: 986 SDSSDSSDSSDSSDSS--NSSDSSDSSDSSDSSNSSDSSNSSDSSNSSD-SSDSSDSSDS 1042
Query: 996 VNTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLAGDWGSNGKDPTSNHMFSEEPVID 1055
++ + + ++ + D+S ++ + S+ +SN S + D
Sbjct: 1043 SDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSS-D 1101
Query: 1056 STNSVELGGDTINVSLDDGKSQVDLRSPMD 1085
S++S + + + D + D D
Sbjct: 1102 SSDSSDSSDSSDSSDSSDSSNSSDSSDSSD 1131
>FB|FBgn0003137 [details] [associations]
symbol:Ppn "Papilin" species:7227 "Drosophila melanogaster"
[GO:0005604 "basement membrane" evidence=IDA] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0030198
"extracellular matrix organization" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0004867
"serine-type endopeptidase inhibitor activity" evidence=IEA]
InterPro:IPR002223 InterPro:IPR007110 InterPro:IPR008197
InterPro:IPR010294 InterPro:IPR010909 InterPro:IPR013273
Pfam:PF00014 Pfam:PF05986 Pfam:PF08686 PRINTS:PR00759
PRINTS:PR01857 PROSITE:PS50279 PROSITE:PS50835 PROSITE:PS50900
PROSITE:PS51390 SMART:SM00131 SMART:SM00217 EMBL:AE014297
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867
GO:GO:0008270 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 GO:GO:0004222 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000884 Pfam:PF00090 SMART:SM00209
SUPFAM:SSF82895 PROSITE:PS50092 eggNOG:NOG242665 GO:GO:0005201
HSSP:P12111 SUPFAM:SSF57256 GeneTree:ENSGT00700000104482
EMBL:AF205357 EMBL:AF529179 EMBL:AF529180 EMBL:BT011127
RefSeq:NP_001163760.1 RefSeq:NP_001163761.1 RefSeq:NP_788751.2
RefSeq:NP_788752.2 UniGene:Dm.7007 ProteinModelPortal:Q868Z9
SMR:Q868Z9 IntAct:Q868Z9 MINT:MINT-330923 STRING:Q868Z9
PaxDb:Q868Z9 EnsemblMetazoa:FBtr0301837 GeneID:43872
KEGG:dme:Dmel_CG33103 UCSC:CG33103-RA CTD:43872 FlyBase:FBgn0003137
InParanoid:Q868Z9 OMA:GCCPDNI OrthoDB:EOG4Q5748 PhylomeDB:Q868Z9
GenomeRNAi:43872 NextBio:836259 Bgee:Q868Z9 GermOnline:CG33103
Uniprot:Q868Z9
Length = 2898
Score = 133 (51.9 bits), Expect = 0.00048, P = 0.00048
Identities = 67/340 (19%), Positives = 132/340 (38%)
Query: 743 TGMSAELTSVH--CEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGK-QGSKEP 799
+ +S++ TS + D S + + T+ G S+ + D+ S + E G+ +
Sbjct: 826 SSISSDATSEAPASSVSDSSDSTDASTETT-GVSDDSTDVSSSTEASASESTDVSGASDS 884
Query: 800 VALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEM 859
N D+ P E+S TE+ D +TD+ + ++ ++ + +++ N
Sbjct: 885 TGSTNASDSTP-ESS--TEASSSTD-----DSTDSSDNSSNVSESSTEASSSSVSDSN-- 934
Query: 860 DVDRGNVEVAEEASCSVNHGFGTSSQT-DVASAEVCNQPTGDKTNTVDASLLVDTVCLTP 918
D G+ + +S + N TS T D ++ T D+T D+ T
Sbjct: 935 DSSDGSTDGV--SSTTENSSDSTSDATSDSTASSDSTDSTSDQTTETTPESSTDS---TE 989
Query: 919 EPTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIEN-IVAVETEAKGTDGVLVEEGKVGV 977
T+DA +S ++ + + + + + + ++ TD +
Sbjct: 990 SSTLDASSTTDASSTSESSSESSTDGSSTTSNSASSETTGLSSDGSTTDATTAASDNTDI 1049
Query: 978 SVENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLA-GDWG 1036
+ + D TD S + EG S +T + ++G + DG G
Sbjct: 1050 TTDGSTDESTDGSSNASTEGSTEGASEDTTISTE---SSGSTESTDAIASDGSTTEGSTV 1106
Query: 1037 SNGKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLDDGKS 1076
+ TS+ + S+ + DS+ S E+ G T + S DG S
Sbjct: 1107 EDLSSSTSSDVTSDSTITDSSPSTEVSGSTDSSSSTDGSS 1146
>ZFIN|ZDB-GENE-031112-4 [details] [associations]
symbol:stm "starmaker" species:7955 "Danio rerio"
[GO:0009590 "detection of gravity" evidence=IMP] [GO:0043049 "otic
placode formation" evidence=IEP] [GO:0005576 "extracellular region"
evidence=IEA] ZFIN:ZDB-GENE-031112-4 GO:GO:0005576 eggNOG:NOG12793
GO:GO:0043049 GeneTree:ENSGT00550000074777 GO:GO:0009590
EMBL:AY372242 EMBL:CT574549 EMBL:BC129155 IPI:IPI00482673
RefSeq:NP_942112.2 UniGene:Dr.79127 Ensembl:ENSDART00000105174
GeneID:386700 KEGG:dre:386700 CTD:20882 HOVERGEN:HBG095247
OMA:RPGDHSQ NextBio:20813980 Bgee:A2VD23 Uniprot:A2VD23
Length = 613
Score = 124 (48.7 bits), Expect = 0.00072, P = 0.00072
Identities = 102/468 (21%), Positives = 162/468 (34%)
Query: 147 TMDGMAYSTSQFGLDERFGDGDASQMGXXXXXXXXXXK-GTAAG--------HGVSDADP 197
T DG S Q G+ G +A Q G K G A G +G D D
Sbjct: 85 TTDGKD-SAEQHGVTTD-GKDEAEQHGVTTDGQDSAEKRGEADGAPDKPDTQNGTDDTDS 142
Query: 198 QGSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDA-EPIEYAEAPSTPGLVQE 256
+ H D+ + +E+ T DG N + D+ E + + P P
Sbjct: 143 DQETDASHHKTGDSDENKDKPSAEDHT--DG-NHAGKDSTDSKESPDTTDKPEGPDSDSA 199
Query: 257 PNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDG-HTADWPLHKDSNH 315
P+ S DH ED N + +TE+ +D S+ D D H +D KD H
Sbjct: 200 PDGDSASAEKTDSDHSPDEDANKS---STEADKDDTSDKDSSQTDEKHDSD-ASDKDEKH 255
Query: 316 DTVQCMLPEKNGYHVRDAAVKQAESLGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNP- 374
+ EK+ +D+ K E S + +D+ S+ + D QD +
Sbjct: 256 EDKDEKSDEKDSS--KDSEDKSQEKSDK-SDDGSNSEADEQKESVESKDHDSDSQDSDSA 312
Query: 375 ETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLV-VVDADIHACPD-AKD 432
E + AD + S++ K + +E D+ D + H D KD
Sbjct: 313 EKKEKHDDKDQDSSDSADSKDSDEDKDKDHSEQKDSEDHEHKEKHTKDKEEHKDSDEGKD 372
Query: 433 PKMLNIDVAHEETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSK 492
+ + H++ S S K + DNS + D HS S
Sbjct: 373 DEDKSKSDEHDKDESESKEASKSDESEQEEKKDDKSDSDNSSRDSHSDSDSDSHSDSDSD 432
Query: 493 MNQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLN 552
+ S + + +D S+ S D ++ DE D ++ S +E
Sbjct: 433 SHSDSHSDSDSDSH-SD-SDSDSDSDSDSDSDSDSDSNSRDKDEKKDKSSESRDE----- 485
Query: 553 NSITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGN 600
+S SD + + E N D VE +K + S V+A +
Sbjct: 486 DSSDSDSKSNSESSETAEEDTNDDKDSSVEK--DKTDSSDSASVEAND 531
>UNIPROTKB|G5EHS1 [details] [associations]
symbol:MGCH7_ch7g423 "Uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 EMBL:CM000230
EMBL:CM001237 GO:GO:0000228 Gene3D:1.10.10.580 InterPro:IPR023093
RefSeq:XP_003721082.1 EnsemblFungi:MGG_02688T0 GeneID:2682695
KEGG:mgr:MGG_02688 Uniprot:G5EHS1
Length = 712
Score = 131 (51.2 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 42/142 (29%), Positives = 69/142 (48%)
Query: 1 MFYSQFIL-AKKGPLGTIWIAAHLERKLRKNQV---ADTDIGVSVDSILF---PDVPIAL 53
MFYS IL ++K + T+W+ A L+R +V A ++ V + P PIAL
Sbjct: 1 MFYSHEILTSQKHGVATVWVLATLDRSCASRKVSRKAIQEVNVPKACVTIDEPPGAPIAL 60
Query: 54 RLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRST-AVDLPPEESTAPYHSITL-- 110
RL + LL GV R+Y ++ +Y+ D + + ++ R + L P A + +
Sbjct: 61 RLQASLLYGVSRVYQQQCHYVLGDAEKFRISMRGLMRVLDSGTLDPNAGRAKKKQLMIQD 120
Query: 111 -PETFDLDDFELPDNDIFQ-GN 130
PE + F+LP D+ + GN
Sbjct: 121 DPEFHISNFFDLPPLDLDELGN 142
Score = 45 (20.9 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 1169 RKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAKL 1207
R A+ F++ L L T I V+Q D NI P K+
Sbjct: 626 RFNAASAFYQLLCLSTNRTIKVDQ-EGRDRNNIFPFGKI 663
Score = 42 (19.8 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 187 AAGHGVSDADPQGSVKPTTHWEQDNISERMNEISEE 222
+AG G D P +P H+++D + + IS E
Sbjct: 553 SAGMGSVDDHPPD--QPDFHFQEDPANHNSSSISTE 586
>RGD|1309376 [details] [associations]
symbol:Rec8 "REC8 homolog (yeast)" species:10116 "Rattus
norvegicus" [GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA;ISO] [GO:0000780 "condensed nuclear chromosome,
centromeric region" evidence=ISO] [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0000795 "synaptonemal complex"
evidence=ISO] [GO:0000800 "lateral element" evidence=IEA;ISO]
[GO:0001556 "oocyte maturation" evidence=IEA;ISO] [GO:0001673 "male
germ cell nucleus" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO] [GO:0007129 "synapsis" evidence=IEA;ISO] [GO:0007141
"male meiosis I" evidence=IEA;ISO] [GO:0007286 "spermatid
development" evidence=IEA;ISO] [GO:0030893 "meiotic cohesin
complex" evidence=ISO] [GO:0034991 "nuclear meiotic cohesin
complex" evidence=IEA;ISO] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 RGD:1309376 GO:GO:0007059 GO:GO:0000780
GO:GO:0007286 GO:GO:0001673 GO:GO:0001556 GO:GO:0000800
GO:GO:0007141 GO:GO:0007129 GO:GO:0030893 Gene3D:1.10.10.580
InterPro:IPR023093 CTD:9985 eggNOG:NOG248028 HOVERGEN:HBG056766
KO:K13054 OrthoDB:EOG4B5P55 GeneTree:ENSGT00390000011379
HOGENOM:HOG000154087 OMA:ARVFYLL EMBL:AY529701 EMBL:BC079023
IPI:IPI00464726 RefSeq:NP_001011916.1 UniGene:Rn.108612
ProteinModelPortal:Q6AYJ4 STRING:Q6AYJ4 PRIDE:Q6AYJ4
Ensembl:ENSRNOT00000026430 GeneID:290227 KEGG:rno:290227
UCSC:RGD:1309376 InParanoid:Q6AYJ4 NextBio:630770
Genevestigator:Q6AYJ4 Uniprot:Q6AYJ4
Length = 593
Score = 104 (41.7 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 36/125 (28%), Positives = 60/125 (48%)
Query: 1 MFYSQFILAKK-GPLGTIWIAAHLERKLRKNQVADTDIGVSVDSIL----------FPDV 49
MFY +L + G TIW+AA +L K + ++ + + IL P +
Sbjct: 1 MFYYPNVLQRHTGCFATIWLAATRGSRLVKREYLKVNVVKTCEEILNYVLVRVQPPMPGL 60
Query: 50 P---IALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYH 106
P +L LS+ L +GV+R+Y ++ YL +D L + +A +D+ EE+ P
Sbjct: 61 PRPRFSLYLSAQLQIGVIRVYFQQCQYLVEDIQHILEHLHRAQLRIRIDM--EEADLP-- 116
Query: 107 SITLP 111
S+ LP
Sbjct: 117 SLLLP 121
Score = 66 (28.3 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 1168 TRKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAK 1206
+RK ASR+F+ LVL + + V+Q +P + I+ G K
Sbjct: 553 SRKLASRVFYLLLVLSAQKILLVDQQKPYGRLLIRLGPK 591
Score = 46 (21.3 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 361 NCTNVTCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAG-SGSLVV 419
+C V M P+ T V E+R+AD + K ++ ++ EV A SG L++
Sbjct: 409 HCAQVPPRMLRQRPQL---ETEETVEEERVADKEERRKTEALSEIEVLREAQEPSGPLML 465
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.360 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1212 1178 0.00095 123 3 11 23 0.37 35
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 619 (66 KB)
Total size of DFA: 488 KB (2227 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 111.40u 0.12s 111.52t Elapsed: 00:01:01
Total cpu time: 111.43u 0.12s 111.55t Elapsed: 00:01:01
Start: Thu May 9 15:01:14 2013 End: Thu May 9 15:02:15 2013